Query psy11730
Match_columns 496
No_of_seqs 401 out of 3525
Neff 8.1
Searched_HMMs 29240
Date Fri Aug 16 17:27:00 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11730.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11730hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k2o_A Bifunctional arginine d 100.0 6E-62 2E-66 488.9 14.2 308 11-495 2-319 (336)
2 2yu1_A JMJC domain-containing 100.0 1.9E-36 6.6E-41 312.2 7.8 151 50-203 49-228 (451)
3 4gjz_A Lysine-specific demethy 100.0 1.1E-34 3.7E-39 278.6 6.9 135 54-195 2-148 (235)
4 3k3o_A PHF8, PHD finger protei 100.0 1.4E-31 4.9E-36 268.0 13.8 152 49-203 13-179 (371)
5 3pua_A GRC5, PHD finger protei 100.0 2.2E-31 7.5E-36 268.1 9.7 173 25-203 19-206 (392)
6 3kv9_A JMJC domain-containing 100.0 1.1E-30 3.6E-35 263.9 11.5 170 28-203 23-207 (397)
7 3al5_A HTYW5, JMJC domain-cont 100.0 7.7E-31 2.6E-35 265.2 9.7 139 51-203 27-197 (338)
8 3kv4_A PHD finger protein 8; e 100.0 6.8E-30 2.3E-34 263.1 11.3 170 28-203 79-263 (447)
9 3kv5_D JMJC domain-containing 100.0 2.6E-29 8.9E-34 262.8 12.5 149 52-203 135-298 (488)
10 3d8c_A Hypoxia-inducible facto 99.9 1E-27 3.4E-32 243.2 7.6 143 51-203 38-213 (349)
11 3pur_A Lysine-specific demethy 99.8 2.3E-20 7.9E-25 192.7 5.8 137 64-201 152-326 (528)
12 1vrb_A Putative asparaginyl hy 99.5 6.4E-15 2.2E-19 148.5 6.9 121 61-195 26-165 (342)
13 4hc4_A Protein arginine N-meth 99.5 5.9E-15 2E-19 150.3 3.3 165 238-420 40-219 (376)
14 4hg2_A Methyltransferase type 99.4 5.5E-13 1.9E-17 129.4 10.1 101 277-390 28-130 (257)
15 4gek_A TRNA (CMO5U34)-methyltr 99.3 1.4E-12 5E-17 126.7 8.7 112 274-390 55-173 (261)
16 3p9n_A Possible methyltransfer 99.3 2.2E-12 7.5E-17 118.7 8.1 109 278-389 33-147 (189)
17 1nkv_A Hypothetical protein YJ 99.3 4.7E-12 1.6E-16 121.8 9.5 109 277-389 23-134 (256)
18 1pjz_A Thiopurine S-methyltran 99.3 2.2E-12 7.4E-17 120.5 6.4 112 277-389 10-134 (203)
19 3kkz_A Uncharacterized protein 99.3 1.3E-11 4.4E-16 119.9 11.6 112 275-390 30-145 (267)
20 3bzb_A Uncharacterized protein 99.3 6.4E-12 2.2E-16 123.4 9.2 119 268-386 57-191 (281)
21 3ujc_A Phosphoethanolamine N-m 99.3 7.8E-12 2.7E-16 120.7 9.7 113 272-390 37-154 (266)
22 2ypd_A Probable JMJC domain-co 99.3 6.8E-12 2.3E-16 124.3 9.3 56 428-483 289-344 (392)
23 1vl5_A Unknown conserved prote 99.3 6.2E-12 2.1E-16 121.5 8.8 98 288-390 36-135 (260)
24 3bus_A REBM, methyltransferase 99.3 9.1E-12 3.1E-16 121.1 9.5 112 275-389 46-160 (273)
25 3g5l_A Putative S-adenosylmeth 99.3 1E-11 3.5E-16 119.5 9.7 102 281-389 35-139 (253)
26 3f4k_A Putative methyltransfer 99.3 1.7E-11 5.8E-16 118.0 11.2 113 274-390 29-145 (257)
27 3dlc_A Putative S-adenosyl-L-m 99.3 5E-12 1.7E-16 118.1 7.1 110 277-389 31-142 (219)
28 3g5t_A Trans-aconitate 3-methy 99.3 1.1E-11 3.9E-16 122.4 9.8 112 277-390 24-144 (299)
29 3lpm_A Putative methyltransfer 99.2 1E-11 3.4E-16 120.4 8.3 122 248-373 10-132 (259)
30 3l8d_A Methyltransferase; stru 99.2 1.9E-11 6.5E-16 116.5 10.1 104 277-389 42-147 (242)
31 3q7e_A Protein arginine N-meth 99.2 5.3E-12 1.8E-16 128.0 6.5 166 243-421 28-202 (349)
32 4htf_A S-adenosylmethionine-de 99.2 1.4E-11 4.9E-16 120.7 9.1 102 286-390 65-168 (285)
33 3hem_A Cyclopropane-fatty-acyl 99.2 2.5E-11 8.7E-16 120.1 10.7 108 277-390 59-178 (302)
34 2fyt_A Protein arginine N-meth 99.2 8.3E-12 2.8E-16 126.0 6.8 135 242-389 25-165 (340)
35 1xxl_A YCGJ protein; structura 99.2 1.6E-11 5.3E-16 117.4 8.2 110 272-389 7-118 (239)
36 1kpg_A CFA synthase;, cyclopro 99.2 3.8E-11 1.3E-15 117.7 11.0 110 275-390 49-163 (287)
37 2o57_A Putative sarcosine dime 99.2 1.9E-11 6.6E-16 120.4 8.5 111 277-390 65-182 (297)
38 3mti_A RRNA methylase; SAM-dep 99.2 2.4E-11 8.1E-16 111.1 8.4 89 276-368 9-97 (185)
39 2gb4_A Thiopurine S-methyltran 99.2 2.3E-11 8E-16 117.5 8.8 113 277-390 55-186 (252)
40 3ege_A Putative methyltransfer 99.2 4E-11 1.4E-15 116.2 10.1 99 277-386 21-122 (261)
41 3mgg_A Methyltransferase; NYSG 99.2 3.9E-11 1.3E-15 116.9 9.2 110 276-389 23-136 (276)
42 3jwh_A HEN1; methyltransferase 99.2 5.5E-11 1.9E-15 111.6 9.9 101 288-389 28-135 (217)
43 3dh0_A SAM dependent methyltra 99.2 2.7E-11 9.4E-16 113.6 7.7 98 288-389 36-137 (219)
44 3bkw_A MLL3908 protein, S-aden 99.2 4.6E-11 1.6E-15 113.7 9.1 95 288-389 42-138 (243)
45 3ofk_A Nodulation protein S; N 99.2 3E-11 1E-15 113.2 7.6 105 277-389 38-148 (216)
46 1xtp_A LMAJ004091AAA; SGPP, st 99.2 3.8E-11 1.3E-15 115.2 8.4 96 288-389 92-191 (254)
47 3jwg_A HEN1, methyltransferase 99.2 6.1E-11 2.1E-15 111.4 9.7 100 288-388 28-134 (219)
48 3r0q_C Probable protein argini 99.2 2.6E-11 8.8E-16 124.2 7.5 133 243-389 25-163 (376)
49 3vc1_A Geranyl diphosphate 2-C 99.2 6.1E-11 2.1E-15 118.0 10.0 108 279-390 105-216 (312)
50 2p7i_A Hypothetical protein; p 99.2 4.4E-11 1.5E-15 114.0 8.5 92 288-389 41-135 (250)
51 1ve3_A Hypothetical protein PH 99.2 6.6E-11 2.2E-15 111.4 9.4 107 276-389 26-136 (227)
52 3h2b_A SAM-dependent methyltra 99.2 3.2E-11 1.1E-15 111.8 7.0 90 290-389 42-135 (203)
53 2yqz_A Hypothetical protein TT 99.2 7.8E-11 2.7E-15 113.5 9.7 96 289-390 39-136 (263)
54 2ex4_A Adrenal gland protein A 99.2 3.3E-11 1.1E-15 115.1 7.0 97 289-389 79-179 (241)
55 3hnr_A Probable methyltransfer 99.1 5.1E-11 1.8E-15 111.8 8.0 91 289-389 45-139 (220)
56 3orh_A Guanidinoacetate N-meth 99.1 1.9E-11 6.4E-16 116.9 5.0 113 272-390 45-165 (236)
57 2p35_A Trans-aconitate 2-methy 99.1 7.7E-11 2.6E-15 113.4 9.1 99 281-389 24-126 (259)
58 2fpo_A Methylase YHHF; structu 99.1 4.4E-11 1.5E-15 111.5 7.0 97 289-389 54-154 (202)
59 1zx0_A Guanidinoacetate N-meth 99.1 3.3E-11 1.1E-15 114.9 5.9 98 287-389 58-164 (236)
60 4azs_A Methyltransferase WBDD; 99.1 2.9E-11 9.9E-16 130.4 6.0 88 289-380 66-154 (569)
61 3gdh_A Trimethylguanosine synt 99.1 3.1E-11 1.1E-15 115.2 5.4 95 289-388 78-174 (241)
62 2gs9_A Hypothetical protein TT 99.1 8.5E-11 2.9E-15 109.7 8.2 97 280-389 28-126 (211)
63 2xvm_A Tellurite resistance pr 99.1 1.2E-10 4.3E-15 107.1 9.1 96 288-389 31-130 (199)
64 1g6q_1 HnRNP arginine N-methyl 99.1 4.2E-11 1.5E-15 120.2 6.4 132 245-389 2-139 (328)
65 2fk8_A Methoxy mycolic acid sy 99.1 1.6E-10 5.6E-15 115.0 10.4 110 275-390 75-189 (318)
66 3dtn_A Putative methyltransfer 99.1 9.2E-11 3.1E-15 111.3 8.1 95 288-389 43-142 (234)
67 3gu3_A Methyltransferase; alph 99.1 1.1E-10 3.9E-15 114.4 9.1 105 279-389 10-120 (284)
68 3ou2_A SAM-dependent methyltra 99.1 1.3E-10 4.6E-15 108.5 9.1 91 289-389 46-140 (218)
69 3ccf_A Cyclopropane-fatty-acyl 99.1 1.1E-10 3.7E-15 114.1 8.6 90 289-389 57-148 (279)
70 1ri5_A MRNA capping enzyme; me 99.1 6.9E-11 2.4E-15 116.1 7.2 100 288-389 63-168 (298)
71 3evz_A Methyltransferase; NYSG 99.1 1.4E-10 5E-15 109.7 9.2 84 288-375 54-138 (230)
72 1ne2_A Hypothetical protein TA 99.1 1.6E-10 5.6E-15 107.0 9.3 86 278-375 40-125 (200)
73 2ift_A Putative methylase HI07 99.1 6.1E-11 2.1E-15 110.4 6.3 99 289-389 53-157 (201)
74 2pxx_A Uncharacterized protein 99.1 1.1E-10 3.6E-15 108.9 7.9 107 276-389 30-153 (215)
75 3e23_A Uncharacterized protein 99.1 1.1E-10 3.7E-15 109.0 8.0 89 289-389 43-135 (211)
76 3i9f_A Putative type 11 methyl 99.1 5.8E-11 2E-15 106.9 5.8 101 273-389 4-106 (170)
77 3q87_B N6 adenine specific DNA 99.1 1.4E-10 4.9E-15 104.9 8.5 88 272-376 7-94 (170)
78 3lcc_A Putative methyl chlorid 99.1 7.2E-11 2.5E-15 112.2 6.7 107 277-389 55-165 (235)
79 2xdv_A MYC-induced nuclear ant 99.1 2.4E-11 8.2E-16 125.9 3.5 46 60-106 23-70 (442)
80 4fsd_A Arsenic methyltransfera 99.1 1.3E-10 4.4E-15 119.2 8.8 100 289-389 83-197 (383)
81 3iv6_A Putative Zn-dependent a 99.1 1.2E-10 4.1E-15 112.8 8.0 101 279-390 34-143 (261)
82 3g07_A 7SK snRNA methylphospha 99.1 1.3E-10 4.5E-15 114.6 8.0 102 288-389 45-214 (292)
83 3m70_A Tellurite resistance pr 99.1 1.3E-10 4.5E-15 113.8 8.0 94 289-389 120-217 (286)
84 3pfg_A N-methyltransferase; N, 99.1 1.6E-10 5.5E-15 111.7 8.4 101 277-389 39-145 (263)
85 3dli_A Methyltransferase; PSI- 99.1 1.4E-10 4.9E-15 110.6 7.5 90 289-390 41-135 (240)
86 3sm3_A SAM-dependent methyltra 99.1 2.9E-10 9.8E-15 107.4 9.0 99 289-389 30-135 (235)
87 3eey_A Putative rRNA methylase 99.1 3.6E-10 1.2E-14 104.3 9.4 81 288-370 21-103 (197)
88 2a14_A Indolethylamine N-methy 99.1 5.7E-11 2E-15 115.4 4.1 104 287-390 53-192 (263)
89 1wy7_A Hypothetical protein PH 99.1 5.6E-10 1.9E-14 103.8 10.7 89 278-374 38-126 (207)
90 3thr_A Glycine N-methyltransfe 99.1 9.5E-11 3.3E-15 115.1 5.7 99 289-389 57-169 (293)
91 3grz_A L11 mtase, ribosomal pr 99.1 3E-10 1E-14 105.6 8.6 108 272-389 44-153 (205)
92 2p8j_A S-adenosylmethionine-de 99.1 1.4E-10 4.7E-15 107.9 6.3 96 289-389 23-122 (209)
93 3ggd_A SAM-dependent methyltra 99.0 1.8E-10 6E-15 110.2 7.0 95 288-389 55-157 (245)
94 2i62_A Nicotinamide N-methyltr 99.0 9.5E-11 3.3E-15 113.0 4.9 104 286-389 53-192 (265)
95 4dzr_A Protein-(glutamine-N5) 99.0 8.4E-11 2.9E-15 109.4 4.3 99 273-375 12-116 (215)
96 2fhp_A Methylase, putative; al 99.0 2.5E-10 8.7E-15 104.0 7.4 107 272-381 25-136 (187)
97 2esr_A Methyltransferase; stru 99.0 1.8E-10 6.1E-15 104.4 6.1 95 275-371 15-111 (177)
98 1ws6_A Methyltransferase; stru 99.0 5.3E-11 1.8E-15 106.9 2.5 87 289-382 41-130 (171)
99 2vdw_A Vaccinia virus capping 99.0 1.4E-10 4.8E-15 115.0 5.7 102 289-390 48-164 (302)
100 3bkx_A SAM-dependent methyltra 99.0 2.9E-10 9.9E-15 110.5 7.7 100 288-390 42-153 (275)
101 3e05_A Precorrin-6Y C5,15-meth 99.0 7.7E-10 2.6E-14 102.8 10.2 95 288-389 39-136 (204)
102 3fzg_A 16S rRNA methylase; met 99.0 1.4E-10 4.7E-15 106.0 4.8 87 289-381 49-136 (200)
103 1dus_A MJ0882; hypothetical pr 99.0 5E-10 1.7E-14 102.2 8.6 105 279-389 41-151 (194)
104 3bxo_A N,N-dimethyltransferase 99.0 4.3E-10 1.5E-14 106.7 8.3 101 277-389 29-135 (239)
105 3dmg_A Probable ribosomal RNA 99.0 3E-10 1E-14 116.2 7.6 112 272-389 213-334 (381)
106 2avn_A Ubiquinone/menaquinone 99.0 5.2E-10 1.8E-14 108.1 8.6 100 278-389 44-146 (260)
107 1y8c_A S-adenosylmethionine-de 99.0 4.2E-10 1.4E-14 107.0 7.6 95 288-389 36-136 (246)
108 2y1w_A Histone-arginine methyl 99.0 2.7E-10 9.3E-15 115.3 6.6 116 245-374 14-130 (348)
109 3htx_A HEN1; HEN1, small RNA m 99.0 4.1E-10 1.4E-14 122.7 8.2 100 288-388 720-828 (950)
110 3lbf_A Protein-L-isoaspartate 99.0 1.5E-09 5.2E-14 101.1 10.8 94 277-375 64-158 (210)
111 3cc8_A Putative methyltransfer 99.0 1.1E-09 3.9E-14 102.7 10.0 97 282-389 25-124 (230)
112 3m33_A Uncharacterized protein 99.0 5.3E-10 1.8E-14 105.8 7.6 99 276-389 35-136 (226)
113 3ocj_A Putative exported prote 99.0 2.4E-10 8.3E-15 113.3 5.3 98 288-389 117-221 (305)
114 1yzh_A TRNA (guanine-N(7)-)-me 99.0 8.5E-10 2.9E-14 103.4 8.7 81 289-372 41-123 (214)
115 2frn_A Hypothetical protein PH 99.0 5.6E-10 1.9E-14 109.3 7.6 95 289-389 125-219 (278)
116 3njr_A Precorrin-6Y methylase; 99.0 1.4E-09 4.6E-14 101.5 9.6 93 288-389 54-148 (204)
117 3fpf_A Mtnas, putative unchara 99.0 7.9E-10 2.7E-14 108.4 8.2 94 288-390 121-217 (298)
118 2aot_A HMT, histamine N-methyl 99.0 2.9E-10 1E-14 112.0 5.2 100 289-390 52-167 (292)
119 1wzn_A SAM-dependent methyltra 99.0 1.1E-09 3.9E-14 104.9 9.3 95 288-389 40-139 (252)
120 3e8s_A Putative SAM dependent 99.0 4.2E-10 1.4E-14 105.5 5.9 91 288-389 51-146 (227)
121 3g2m_A PCZA361.24; SAM-depende 99.0 2.1E-10 7.3E-15 113.2 4.0 109 278-389 71-184 (299)
122 1nt2_A Fibrillarin-like PRE-rR 99.0 2.2E-09 7.6E-14 100.6 10.5 124 260-390 20-156 (210)
123 2g72_A Phenylethanolamine N-me 99.0 3.3E-10 1.1E-14 111.3 4.7 103 288-390 70-210 (289)
124 1xdz_A Methyltransferase GIDB; 99.0 4.8E-10 1.6E-14 107.2 5.7 94 289-389 70-168 (240)
125 3bgv_A MRNA CAP guanine-N7 met 98.9 7.4E-10 2.5E-14 110.1 7.1 101 289-389 34-149 (313)
126 3d2l_A SAM-dependent methyltra 98.9 1E-09 3.5E-14 104.4 7.8 103 278-389 23-131 (243)
127 3dxy_A TRNA (guanine-N(7)-)-me 98.9 5.3E-10 1.8E-14 105.6 5.7 80 289-371 34-116 (218)
128 2kw5_A SLR1183 protein; struct 98.9 1.1E-09 3.6E-14 101.4 7.7 92 292-389 32-125 (202)
129 2ozv_A Hypothetical protein AT 98.9 9.2E-10 3.1E-14 106.7 7.3 98 273-373 23-128 (260)
130 2yxd_A Probable cobalt-precorr 98.9 1.7E-09 5.9E-14 97.7 8.5 98 275-382 20-118 (183)
131 2fca_A TRNA (guanine-N(7)-)-me 98.9 1.2E-09 4E-14 102.7 7.3 81 289-372 38-120 (213)
132 1vbf_A 231AA long hypothetical 98.9 3.8E-09 1.3E-13 99.9 10.9 92 277-375 57-149 (231)
133 2h00_A Methyltransferase 10 do 98.9 2.3E-09 8E-14 103.1 9.6 98 275-374 48-154 (254)
134 1vlm_A SAM-dependent methyltra 98.9 1.1E-09 3.7E-14 103.0 6.9 84 290-389 48-133 (219)
135 3uwp_A Histone-lysine N-methyl 98.9 1E-09 3.6E-14 111.6 7.1 115 274-389 157-282 (438)
136 3hm2_A Precorrin-6Y C5,15-meth 98.9 2.7E-09 9.3E-14 96.3 9.3 97 288-389 24-121 (178)
137 2b3t_A Protein methyltransfera 98.9 3.1E-09 1.1E-13 103.7 10.3 97 272-373 92-189 (276)
138 4dcm_A Ribosomal RNA large sub 98.9 2.1E-09 7.1E-14 109.8 9.4 108 280-389 212-328 (375)
139 3cgg_A SAM-dependent methyltra 98.9 2.3E-09 8E-14 97.8 8.4 91 289-389 46-141 (195)
140 3p2e_A 16S rRNA methylase; met 98.9 1.6E-09 5.3E-14 102.8 7.4 100 288-390 23-134 (225)
141 4e2x_A TCAB9; kijanose, tetron 98.9 5.6E-10 1.9E-14 115.6 4.1 106 277-389 94-202 (416)
142 4df3_A Fibrillarin-like rRNA/T 98.9 5E-09 1.7E-13 99.5 10.3 116 268-390 51-177 (233)
143 3b3j_A Histone-arginine methyl 98.9 1E-09 3.5E-14 115.6 6.1 93 277-374 145-238 (480)
144 1l3i_A Precorrin-6Y methyltran 98.9 2.9E-09 9.9E-14 96.9 8.0 108 275-389 18-128 (192)
145 1fbn_A MJ fibrillarin homologu 98.9 3.8E-09 1.3E-13 100.2 8.9 100 278-389 59-172 (230)
146 3u81_A Catechol O-methyltransf 98.9 2.4E-09 8.2E-14 100.9 7.4 99 289-389 58-164 (221)
147 3ntv_A MW1564 protein; rossman 98.9 5.7E-09 1.9E-13 99.2 10.0 96 289-389 71-170 (232)
148 3g89_A Ribosomal RNA small sub 98.9 1.8E-09 6.1E-14 104.0 6.5 94 289-389 80-178 (249)
149 1jsx_A Glucose-inhibited divis 98.9 3.8E-09 1.3E-13 98.1 8.4 92 289-389 65-159 (207)
150 2yxe_A Protein-L-isoaspartate 98.9 8.1E-09 2.8E-13 96.5 10.5 94 278-375 65-161 (215)
151 3gru_A Dimethyladenosine trans 98.9 3.6E-09 1.2E-13 104.3 8.1 91 276-373 36-127 (295)
152 2igt_A SAM dependent methyltra 98.8 2.7E-09 9.2E-14 107.2 7.0 99 289-389 153-266 (332)
153 1dl5_A Protein-L-isoaspartate 98.8 9.4E-09 3.2E-13 102.5 11.0 94 277-374 62-158 (317)
154 1nv8_A HEMK protein; class I a 98.8 4.4E-09 1.5E-13 103.3 8.0 98 272-374 105-206 (284)
155 3fut_A Dimethyladenosine trans 98.8 4.4E-09 1.5E-13 102.4 7.8 90 276-373 33-123 (271)
156 3k6r_A Putative transferase PH 98.8 5.5E-09 1.9E-13 101.9 8.4 89 289-381 125-213 (278)
157 1af7_A Chemotaxis receptor met 98.8 2.7E-09 9.1E-14 104.1 6.0 100 290-389 106-246 (274)
158 3hp7_A Hemolysin, putative; st 98.8 1.9E-09 6.5E-14 105.7 4.9 107 273-390 68-180 (291)
159 3mq2_A 16S rRNA methyltransfer 98.8 1.3E-09 4.5E-14 102.2 3.6 96 289-389 27-134 (218)
160 3tqs_A Ribosomal RNA small sub 98.8 5E-09 1.7E-13 101.2 7.7 91 276-373 15-109 (255)
161 3gnl_A Uncharacterized protein 98.8 5.6E-09 1.9E-13 99.6 7.7 79 289-370 21-100 (244)
162 2ipx_A RRNA 2'-O-methyltransfe 98.8 5.3E-09 1.8E-13 99.2 7.5 94 289-389 77-176 (233)
163 3lec_A NADB-rossmann superfami 98.8 6.3E-09 2.2E-13 98.5 7.8 80 289-371 21-101 (230)
164 1p91_A Ribosomal RNA large sub 98.8 1E-08 3.5E-13 99.2 9.6 90 277-375 73-163 (269)
165 1o9g_A RRNA methyltransferase; 98.8 3.1E-09 1.1E-13 102.0 5.7 96 278-375 39-183 (250)
166 3ckk_A TRNA (guanine-N(7)-)-me 98.8 5E-09 1.7E-13 100.0 7.0 84 289-372 46-135 (235)
167 2nxc_A L11 mtase, ribosomal pr 98.8 4.1E-09 1.4E-13 101.7 6.4 94 272-373 104-197 (254)
168 2qe6_A Uncharacterized protein 98.8 8.3E-09 2.8E-13 100.8 8.5 95 290-389 78-190 (274)
169 1qam_A ERMC' methyltransferase 98.8 1.5E-08 5.3E-13 97.1 10.2 91 275-372 15-106 (244)
170 1jg1_A PIMT;, protein-L-isoasp 98.8 8.7E-09 3E-13 98.0 8.4 94 278-375 79-173 (235)
171 3tm4_A TRNA (guanine N2-)-meth 98.8 9E-09 3.1E-13 105.1 9.0 92 278-372 206-298 (373)
172 1ej0_A FTSJ; methyltransferase 98.8 5.3E-09 1.8E-13 93.6 6.4 88 275-376 7-104 (180)
173 3kr9_A SAM-dependent methyltra 98.8 9E-09 3.1E-13 97.2 7.8 79 289-370 15-94 (225)
174 1zq9_A Probable dimethyladenos 98.8 1.1E-08 3.9E-13 100.4 8.8 93 276-374 14-107 (285)
175 2pjd_A Ribosomal RNA small sub 98.8 3.8E-09 1.3E-13 106.5 5.4 94 289-389 196-297 (343)
176 1g8a_A Fibrillarin-like PRE-rR 98.8 1.7E-08 5.7E-13 95.3 9.5 89 276-369 56-152 (227)
177 3a27_A TYW2, uncharacterized p 98.8 1.3E-08 4.6E-13 99.2 8.8 77 289-370 119-196 (272)
178 2b78_A Hypothetical protein SM 98.8 7.5E-09 2.6E-13 106.1 7.2 90 279-371 203-296 (385)
179 2qm3_A Predicted methyltransfe 98.8 1.8E-08 6.2E-13 102.8 9.7 98 287-389 170-271 (373)
180 3adn_A Spermidine synthase; am 98.8 8.8E-09 3E-13 101.6 7.1 82 289-370 83-167 (294)
181 3bt7_A TRNA (uracil-5-)-methyl 98.7 9.1E-09 3.1E-13 104.9 7.0 92 276-371 200-306 (369)
182 1u2z_A Histone-lysine N-methyl 98.7 1.7E-08 5.9E-13 104.3 9.1 110 278-389 230-353 (433)
183 3tfw_A Putative O-methyltransf 98.7 1.2E-08 4.2E-13 98.0 7.5 96 289-389 63-164 (248)
184 2h1r_A Dimethyladenosine trans 98.7 1E-08 3.5E-13 101.4 6.7 90 277-373 29-119 (299)
185 1uwv_A 23S rRNA (uracil-5-)-me 98.7 1.8E-08 6E-13 105.0 8.7 96 275-374 271-370 (433)
186 3ftd_A Dimethyladenosine trans 98.7 2.9E-08 9.7E-13 95.6 9.1 90 276-373 17-108 (249)
187 3bwc_A Spermidine synthase; SA 98.7 1.3E-08 4.6E-13 100.8 6.9 102 288-389 94-204 (304)
188 3dp7_A SAM-dependent methyltra 98.7 2.3E-08 8E-13 101.5 8.8 98 289-389 179-281 (363)
189 3tma_A Methyltransferase; thum 98.7 2.6E-08 8.9E-13 100.8 9.1 94 275-372 188-284 (354)
190 3opn_A Putative hemolysin; str 98.7 7.3E-09 2.5E-13 98.6 4.7 59 274-332 21-80 (232)
191 3dr5_A Putative O-methyltransf 98.7 2.2E-08 7.6E-13 94.5 8.0 97 274-372 40-141 (221)
192 3frh_A 16S rRNA methylase; met 98.7 2.5E-08 8.6E-13 94.3 8.0 83 288-378 104-186 (253)
193 3mcz_A O-methyltransferase; ad 98.7 1.9E-08 6.5E-13 101.5 7.8 97 290-389 180-281 (352)
194 2wa2_A Non-structural protein 98.7 1.1E-08 3.8E-13 99.9 5.8 91 272-369 65-157 (276)
195 2oxt_A Nucleoside-2'-O-methylt 98.7 1.3E-08 4.3E-13 98.9 6.0 93 273-373 58-152 (265)
196 3tr6_A O-methyltransferase; ce 98.7 9.2E-09 3.2E-13 96.8 4.9 96 289-389 64-168 (225)
197 2pwy_A TRNA (adenine-N(1)-)-me 98.7 3E-08 1E-12 95.1 8.5 93 288-389 95-192 (258)
198 1yb2_A Hypothetical protein TA 98.7 2.1E-08 7.3E-13 97.7 7.5 92 289-389 110-205 (275)
199 3id6_C Fibrillarin-like rRNA/T 98.7 8.2E-08 2.8E-12 91.2 11.3 114 269-390 51-176 (232)
200 2gpy_A O-methyltransferase; st 98.7 1.6E-08 5.5E-13 95.8 6.4 96 289-389 54-154 (233)
201 3duw_A OMT, O-methyltransferas 98.7 1.5E-08 5.1E-13 95.3 6.0 96 289-389 58-161 (223)
202 1yub_A Ermam, rRNA methyltrans 98.7 5.6E-09 1.9E-13 100.1 3.1 89 278-373 17-106 (245)
203 3ajd_A Putative methyltransfer 98.7 1.7E-08 5.9E-13 98.5 6.1 125 288-418 82-231 (274)
204 2vdv_E TRNA (guanine-N(7)-)-me 98.7 3.6E-08 1.2E-12 94.4 8.3 80 289-368 49-136 (246)
205 3c0k_A UPF0064 protein YCCW; P 98.7 2.2E-08 7.6E-13 103.0 7.2 83 288-372 219-305 (396)
206 1i1n_A Protein-L-isoaspartate 98.7 5.6E-08 1.9E-12 91.5 9.4 86 288-374 76-165 (226)
207 1qzz_A RDMB, aclacinomycin-10- 98.7 3.8E-08 1.3E-12 100.1 8.8 95 289-389 182-281 (374)
208 2bm8_A Cephalosporin hydroxyla 98.7 2.2E-08 7.4E-13 95.6 6.5 90 289-389 81-181 (236)
209 2as0_A Hypothetical protein PH 98.7 1.2E-08 4E-13 105.0 4.9 82 289-372 217-301 (396)
210 2ip2_A Probable phenazine-spec 98.7 2.7E-08 9.4E-13 99.6 7.4 104 280-389 158-266 (334)
211 3c3p_A Methyltransferase; NP_9 98.7 1.5E-08 5.1E-13 94.5 4.9 95 289-389 56-154 (210)
212 2r3s_A Uncharacterized protein 98.7 3.3E-08 1.1E-12 98.9 7.7 96 289-389 165-265 (335)
213 3gwz_A MMCR; methyltransferase 98.7 7E-08 2.4E-12 98.2 10.3 105 279-389 191-301 (369)
214 4diq_A Lysine-specific demethy 98.7 9.2E-08 3.2E-12 98.9 11.1 38 430-467 226-265 (489)
215 3r3h_A O-methyltransferase, SA 98.6 5.3E-09 1.8E-13 100.3 1.8 96 289-389 60-164 (242)
216 2pbf_A Protein-L-isoaspartate 98.6 3.6E-08 1.2E-12 92.8 7.5 84 289-373 80-175 (227)
217 2r6z_A UPF0341 protein in RSP 98.6 7.7E-09 2.6E-13 100.1 2.8 82 289-373 83-174 (258)
218 1x19_A CRTF-related protein; m 98.6 6.1E-08 2.1E-12 98.2 9.4 103 281-389 181-289 (359)
219 3mb5_A SAM-dependent methyltra 98.6 7.1E-08 2.4E-12 92.5 9.4 100 281-389 84-188 (255)
220 3v97_A Ribosomal RNA large sub 98.6 4E-08 1.4E-12 108.1 8.4 92 277-371 529-620 (703)
221 3i53_A O-methyltransferase; CO 98.6 5.4E-08 1.9E-12 97.4 8.6 94 290-389 170-268 (332)
222 1sui_A Caffeoyl-COA O-methyltr 98.6 2.3E-08 8E-13 96.0 5.6 97 289-390 79-185 (247)
223 2plw_A Ribosomal RNA methyltra 98.6 9.2E-08 3.1E-12 88.1 9.2 86 274-373 6-119 (201)
224 1m6y_A S-adenosyl-methyltransf 98.6 3.2E-08 1.1E-12 97.7 6.4 78 289-370 26-108 (301)
225 2yx1_A Hypothetical protein MJ 98.6 6.4E-08 2.2E-12 97.3 8.4 84 289-380 195-278 (336)
226 2yvl_A TRMI protein, hypotheti 98.6 1.1E-07 3.9E-12 90.4 9.7 100 281-389 82-184 (248)
227 1iy9_A Spermidine synthase; ro 98.6 4.4E-08 1.5E-12 95.7 6.8 82 289-370 75-158 (275)
228 2zfu_A Nucleomethylin, cerebra 98.6 3.1E-08 1.1E-12 92.4 5.5 86 278-389 58-145 (215)
229 2i7c_A Spermidine synthase; tr 98.6 4.5E-08 1.5E-12 96.0 6.8 83 288-370 77-161 (283)
230 4dmg_A Putative uncharacterize 98.6 6.5E-08 2.2E-12 99.2 8.2 79 289-372 214-292 (393)
231 1ixk_A Methyltransferase; open 98.6 5.5E-08 1.9E-12 96.9 7.4 78 288-369 117-196 (315)
232 3uzu_A Ribosomal RNA small sub 98.6 3.9E-08 1.3E-12 96.2 6.2 91 276-373 28-127 (279)
233 2jjq_A Uncharacterized RNA met 98.6 9.5E-08 3.3E-12 99.0 9.1 85 277-371 280-364 (425)
234 3ldu_A Putative methylase; str 98.6 1.2E-07 4.3E-12 96.9 9.8 93 275-371 180-312 (385)
235 1i9g_A Hypothetical protein RV 98.6 8.8E-08 3E-12 93.2 8.3 96 288-389 98-197 (280)
236 1mjf_A Spermidine synthase; sp 98.6 4.9E-08 1.7E-12 95.6 6.5 80 289-370 75-162 (281)
237 1fp2_A Isoflavone O-methyltran 98.6 9E-08 3.1E-12 96.7 8.5 85 289-387 188-277 (352)
238 2o07_A Spermidine synthase; st 98.6 6.7E-08 2.3E-12 95.7 7.1 83 288-370 94-178 (304)
239 1wxx_A TT1595, hypothetical pr 98.6 4.6E-08 1.6E-12 100.1 5.8 80 289-372 209-291 (382)
240 1inl_A Spermidine synthase; be 98.6 5.2E-08 1.8E-12 96.2 5.9 81 289-369 90-172 (296)
241 1tw3_A COMT, carminomycin 4-O- 98.6 1.1E-07 3.7E-12 96.2 8.5 95 289-389 183-282 (360)
242 1r18_A Protein-L-isoaspartate( 98.5 1E-07 3.5E-12 89.9 7.5 85 289-374 84-177 (227)
243 1qyr_A KSGA, high level kasuga 98.5 7.2E-08 2.5E-12 92.9 6.5 88 277-372 8-102 (252)
244 3dou_A Ribosomal RNA large sub 98.5 8.6E-08 2.9E-12 88.4 6.7 84 272-370 7-101 (191)
245 1fp1_D Isoliquiritigenin 2'-O- 98.5 1.6E-07 5.3E-12 95.7 9.3 87 289-389 209-300 (372)
246 3ll7_A Putative methyltransfer 98.5 3.9E-08 1.3E-12 100.8 4.6 81 290-372 94-175 (410)
247 3lcv_B Sisomicin-gentamicin re 98.5 5.4E-08 1.8E-12 92.9 5.2 84 289-378 132-216 (281)
248 3sso_A Methyltransferase; macr 98.5 5.4E-08 1.8E-12 98.8 5.4 98 279-389 206-318 (419)
249 2b25_A Hypothetical protein; s 98.5 2.1E-07 7.3E-12 93.3 9.8 82 288-369 104-196 (336)
250 1xj5_A Spermidine synthase 1; 98.5 1.1E-07 3.9E-12 95.3 7.5 82 288-369 119-203 (334)
251 2pt6_A Spermidine synthase; tr 98.5 6.8E-08 2.3E-12 96.5 5.8 81 289-369 116-198 (321)
252 2p41_A Type II methyltransfera 98.5 8.1E-08 2.8E-12 95.2 6.2 87 274-370 67-158 (305)
253 2avd_A Catechol-O-methyltransf 98.5 5E-08 1.7E-12 92.0 4.4 79 289-369 69-154 (229)
254 3k0b_A Predicted N6-adenine-sp 98.5 2.6E-07 8.9E-12 94.7 10.1 92 276-371 187-318 (393)
255 1uir_A Polyamine aminopropyltr 98.5 7.5E-08 2.6E-12 95.8 5.8 84 289-372 77-163 (314)
256 2frx_A Hypothetical protein YE 98.5 2.8E-07 9.6E-12 96.9 10.3 125 289-419 117-267 (479)
257 3m6w_A RRNA methylase; rRNA me 98.5 8.9E-08 3E-12 99.9 6.3 124 289-419 101-250 (464)
258 2b2c_A Spermidine synthase; be 98.5 9.9E-08 3.4E-12 94.9 6.4 81 289-369 108-190 (314)
259 3lst_A CALO1 methyltransferase 98.5 2.5E-07 8.7E-12 93.2 9.1 100 281-389 175-280 (348)
260 2ih2_A Modification methylase 98.5 1.6E-07 5.4E-12 97.0 7.7 86 275-374 24-112 (421)
261 2nyu_A Putative ribosomal RNA 98.5 2E-07 6.7E-12 85.4 7.5 84 275-372 7-109 (196)
262 3m4x_A NOL1/NOP2/SUN family pr 98.5 9.8E-08 3.3E-12 99.5 6.0 125 288-418 104-254 (456)
263 3c3y_A Pfomt, O-methyltransfer 98.5 9.5E-08 3.2E-12 91.1 5.4 96 289-389 70-175 (237)
264 1o54_A SAM-dependent O-methylt 98.5 3.5E-07 1.2E-11 89.1 9.6 77 288-368 111-189 (277)
265 3cbg_A O-methyltransferase; cy 98.5 7.5E-08 2.6E-12 91.4 4.5 96 289-389 72-176 (232)
266 3ldg_A Putative uncharacterize 98.5 4.4E-07 1.5E-11 92.7 10.4 93 276-372 180-312 (384)
267 2hnk_A SAM-dependent O-methylt 98.5 1.3E-07 4.5E-12 89.9 6.0 96 289-389 60-175 (239)
268 3reo_A (ISO)eugenol O-methyltr 98.5 5.6E-07 1.9E-11 91.5 10.8 97 279-389 191-294 (368)
269 2cmg_A Spermidine synthase; tr 98.4 3.2E-07 1.1E-11 88.8 8.2 92 288-389 71-165 (262)
270 2f8l_A Hypothetical protein LM 98.4 1.9E-07 6.5E-12 94.1 5.7 81 289-375 130-216 (344)
271 1zg3_A Isoflavanone 4'-O-methy 98.4 3.6E-07 1.2E-11 92.5 7.8 85 289-387 193-282 (358)
272 3giw_A Protein of unknown func 98.4 2.7E-07 9.1E-12 89.4 6.2 97 290-389 79-194 (277)
273 2dul_A N(2),N(2)-dimethylguano 98.4 3.6E-07 1.2E-11 93.2 6.6 81 289-369 47-140 (378)
274 2oyr_A UPF0341 protein YHIQ; a 98.4 1.5E-07 5E-12 90.8 3.6 82 291-373 90-177 (258)
275 3gjy_A Spermidine synthase; AP 98.4 5E-07 1.7E-11 89.5 7.0 77 290-369 90-168 (317)
276 3p9c_A Caffeic acid O-methyltr 98.3 8.9E-07 3E-11 89.9 8.9 87 289-389 201-292 (364)
277 2yxl_A PH0851 protein, 450AA l 98.3 7.1E-07 2.4E-11 93.3 8.3 80 288-370 258-340 (450)
278 3axs_A Probable N(2),N(2)-dime 98.3 4.1E-07 1.4E-11 93.0 4.9 78 289-368 52-133 (392)
279 2qfm_A Spermine synthase; sper 98.3 7.5E-07 2.6E-11 89.4 6.3 81 289-369 188-276 (364)
280 2ld4_A Anamorsin; methyltransf 98.3 1.7E-07 5.9E-12 84.6 1.2 80 289-390 12-96 (176)
281 2b9e_A NOL1/NOP2/SUN domain fa 98.2 2.5E-06 8.5E-11 84.6 9.4 80 288-370 101-184 (309)
282 4a6d_A Hydroxyindole O-methylt 98.2 3.6E-06 1.2E-10 85.0 10.3 104 279-389 168-277 (353)
283 1sqg_A SUN protein, FMU protei 98.2 1.3E-06 4.5E-11 90.6 7.1 80 288-371 245-326 (429)
284 2okc_A Type I restriction enzy 98.2 1.7E-06 5.8E-11 90.2 6.8 94 278-374 159-267 (445)
285 3v97_A Ribosomal RNA large sub 98.1 8.6E-06 3E-10 89.5 10.2 96 275-372 175-315 (703)
286 4gqb_A Protein arginine N-meth 98.1 2.5E-06 8.4E-11 91.9 5.7 81 288-373 356-441 (637)
287 2k4m_A TR8_protein, UPF0146 pr 98.0 8.5E-06 2.9E-10 70.6 6.4 87 277-382 24-112 (153)
288 3lkd_A Type I restriction-modi 97.9 2.4E-05 8.3E-10 83.2 8.6 97 275-372 206-309 (542)
289 2ar0_A M.ecoki, type I restric 97.9 1.2E-05 4.3E-10 85.6 6.1 84 288-374 168-275 (541)
290 1wg8_A Predicted S-adenosylmet 97.8 2E-05 6.9E-10 76.1 6.2 87 278-372 10-101 (285)
291 2xxz_A Lysine-specific demethy 97.8 6.7E-05 2.3E-09 73.8 9.8 45 428-472 275-319 (332)
292 3s1s_A Restriction endonucleas 97.8 3.8E-05 1.3E-09 83.9 8.5 84 289-372 321-411 (878)
293 3khk_A Type I restriction-modi 97.7 1.6E-05 5.6E-10 84.7 4.6 94 277-372 232-341 (544)
294 3ua3_A Protein arginine N-meth 97.7 2E-05 7E-10 84.8 5.2 81 290-373 410-508 (745)
295 2xyq_A Putative 2'-O-methyl tr 97.7 6.2E-05 2.1E-09 73.7 7.2 73 277-369 49-132 (290)
296 3evf_A RNA-directed RNA polyme 97.6 8.5E-05 2.9E-09 71.3 6.7 94 272-371 57-151 (277)
297 3gcz_A Polyprotein; flavivirus 97.6 8.7E-05 3E-09 71.3 6.4 94 272-371 73-167 (282)
298 3avr_A Lysine-specific demethy 97.6 0.00024 8.3E-09 74.1 10.2 45 428-472 334-378 (531)
299 2zig_A TTHA0409, putative modi 97.3 0.00018 6.3E-09 70.6 5.5 58 275-333 221-278 (297)
300 4auk_A Ribosomal RNA large sub 97.3 0.00045 1.5E-08 69.3 8.3 74 288-373 210-283 (375)
301 3cvo_A Methyltransferase-like 97.3 0.00062 2.1E-08 62.8 8.5 79 289-369 30-131 (202)
302 3p8z_A Mtase, non-structural p 97.1 0.00065 2.2E-08 63.4 6.7 89 272-367 61-151 (267)
303 3o4f_A Spermidine synthase; am 97.1 0.0014 4.8E-08 63.9 9.3 81 288-368 82-165 (294)
304 3eld_A Methyltransferase; flav 97.0 0.0013 4.4E-08 63.6 7.2 94 272-371 64-158 (300)
305 3lkz_A Non-structural protein 96.9 0.0014 4.8E-08 63.1 6.5 96 272-375 77-174 (321)
306 2oo3_A Protein involved in cat 96.9 0.00058 2E-08 66.0 3.7 97 288-390 90-193 (283)
307 3tka_A Ribosomal RNA small sub 96.8 0.0022 7.7E-08 63.3 7.5 96 278-380 45-150 (347)
308 3g7u_A Cytosine-specific methy 96.6 0.0019 6.7E-08 65.4 5.8 76 291-374 3-85 (376)
309 1g55_A DNA cytosine methyltran 96.6 0.0012 4.3E-08 66.0 3.9 76 291-374 3-82 (343)
310 2qy6_A UPF0209 protein YFCK; s 96.6 0.0032 1.1E-07 60.4 6.6 80 289-368 60-181 (257)
311 2c7p_A Modification methylase 96.5 0.004 1.4E-07 61.9 7.1 76 289-374 10-85 (327)
312 1g60_A Adenine-specific methyl 96.5 0.0023 7.9E-08 61.3 5.1 57 275-332 198-254 (260)
313 3ufb_A Type I restriction-modi 96.5 0.0041 1.4E-07 65.9 7.3 93 277-372 204-314 (530)
314 2efj_A 3,7-dimethylxanthine me 96.4 0.0055 1.9E-07 62.0 7.5 83 290-377 53-166 (384)
315 1i4w_A Mitochondrial replicati 96.3 0.0044 1.5E-07 62.1 5.8 75 274-354 36-118 (353)
316 4fzv_A Putative methyltransfer 96.2 0.0055 1.9E-07 61.6 6.2 128 288-418 147-304 (359)
317 2px2_A Genome polyprotein [con 96.0 0.015 5.2E-07 55.0 7.8 90 267-368 52-147 (269)
318 3ubt_Y Modification methylase 95.9 0.0092 3.1E-07 59.0 6.4 74 292-374 2-75 (331)
319 3b5i_A S-adenosyl-L-methionine 95.8 0.012 4.2E-07 59.3 6.5 88 290-378 53-168 (374)
320 3c6k_A Spermine synthase; sper 95.5 0.015 5.3E-07 58.4 6.1 80 289-368 205-292 (381)
321 1m6e_X S-adenosyl-L-methionnin 95.2 0.0077 2.6E-07 60.4 2.8 84 291-377 53-156 (359)
322 2qrv_A DNA (cytosine-5)-methyl 95.0 0.029 9.8E-07 54.8 5.9 78 290-375 16-98 (295)
323 4h0n_A DNMT2; SAH binding, tra 94.8 0.02 7E-07 56.8 4.6 75 292-374 5-83 (333)
324 4ask_A Lysine-specific demethy 94.5 0.075 2.6E-06 54.7 7.7 42 428-469 309-350 (510)
325 3qv2_A 5-cytosine DNA methyltr 94.0 0.042 1.4E-06 54.4 4.7 74 291-373 11-89 (327)
326 1boo_A Protein (N-4 cytosine-s 93.7 0.072 2.5E-06 52.6 5.8 57 275-332 238-294 (323)
327 3me5_A Cytosine-specific methy 93.6 0.048 1.7E-06 56.8 4.5 79 291-374 89-183 (482)
328 2wk1_A NOVP; transferase, O-me 93.1 0.083 2.8E-06 51.1 4.9 80 289-370 106-219 (282)
329 2py6_A Methyltransferase FKBM; 92.9 0.12 4.3E-06 52.6 6.1 63 289-352 226-293 (409)
330 3r24_A NSP16, 2'-O-methyl tran 92.0 0.65 2.2E-05 44.7 9.4 75 276-369 94-178 (344)
331 1eg2_A Modification methylase 91.8 0.13 4.3E-06 50.7 4.5 58 274-332 227-287 (319)
332 3swr_A DNA (cytosine-5)-methyl 90.2 0.28 9.5E-06 55.5 5.7 76 291-374 541-632 (1002)
333 4ft4_B DNA (cytosine-5)-methyl 86.4 0.66 2.3E-05 51.3 5.6 43 290-332 212-260 (784)
334 3av4_A DNA (cytosine-5)-methyl 83.9 1.2 4.1E-05 51.8 6.2 77 290-374 851-943 (1330)
335 4dkj_A Cytosine-specific methy 82.3 1.2 4.2E-05 45.1 5.0 41 291-331 11-57 (403)
336 2vz8_A Fatty acid synthase; tr 82.2 0.66 2.3E-05 57.9 3.5 95 289-389 1240-1342(2512)
337 3lag_A Uncharacterized protein 73.9 1.4 4.8E-05 35.0 2.0 25 432-456 59-83 (98)
338 4f3n_A Uncharacterized ACR, CO 73.8 2.6 9E-05 42.9 4.4 76 290-373 138-220 (432)
339 1zkd_A DUF185; NESG, RPR58, st 73.7 13 0.00044 37.3 9.4 74 290-373 81-162 (387)
340 2dph_A Formaldehyde dismutase; 70.3 3.7 0.00013 41.2 4.6 43 288-330 184-228 (398)
341 3dxt_A JMJC domain-containing 70.0 3.2 0.00011 40.9 3.9 44 428-471 258-301 (354)
342 3st7_A Capsular polysaccharide 69.3 2 6.7E-05 42.5 2.3 30 440-469 327-356 (369)
343 1rjd_A PPM1P, carboxy methyl t 69.0 6.6 0.00023 38.6 6.0 100 289-389 97-226 (334)
344 3two_A Mannitol dehydrogenase; 65.4 9 0.00031 37.4 6.2 43 288-330 175-218 (348)
345 1ep0_A DTDP-6-deoxy-D-XYLO-4-h 64.9 4.4 0.00015 36.2 3.4 30 438-468 108-137 (185)
346 1x82_A Glucose-6-phosphate iso 64.3 3 0.0001 37.4 2.2 26 432-457 119-144 (190)
347 2ixk_A DTDP-4-dehydrorhamnose 63.3 4.9 0.00017 36.0 3.4 30 438-468 109-138 (184)
348 1o5u_A Novel thermotoga mariti 63.1 6.7 0.00023 31.2 3.9 28 433-460 69-96 (101)
349 4axo_A EUTQ, ethanolamine util 61.9 6.4 0.00022 34.0 3.8 29 433-461 103-131 (151)
350 1dzr_A DTDP-4-dehydrorhamnose 61.4 5.6 0.00019 35.5 3.4 29 438-467 108-136 (183)
351 1f8f_A Benzyl alcohol dehydrog 60.5 7.2 0.00025 38.5 4.5 43 288-330 189-233 (371)
352 3ejk_A DTDP sugar isomerase; Y 60.4 4.1 0.00014 36.1 2.3 30 438-467 112-141 (174)
353 1fi2_A Oxalate oxidase, germin 59.9 11 0.00039 33.7 5.4 25 432-456 119-143 (201)
354 3s2e_A Zinc-containing alcohol 58.7 16 0.00055 35.4 6.6 44 288-331 165-209 (340)
355 3d82_A Cupin 2, conserved barr 58.0 7.1 0.00024 30.1 3.2 29 433-461 69-97 (102)
356 1pl8_A Human sorbitol dehydrog 57.3 9.9 0.00034 37.3 4.9 43 288-330 170-214 (356)
357 3pvc_A TRNA 5-methylaminomethy 56.8 14 0.00049 39.8 6.4 78 291-368 60-179 (689)
358 2gu9_A Tetracenomycin polyketi 56.3 4.8 0.00016 31.8 1.9 25 433-457 63-87 (113)
359 2ox0_A JMJC domain-containing 56.2 9.6 0.00033 38.0 4.4 42 428-469 276-317 (381)
360 1v70_A Probable antibiotics sy 56.2 5.4 0.00019 30.8 2.2 24 433-456 68-91 (105)
361 1dgw_A Canavalin; duplicated s 56.1 5.4 0.00018 35.3 2.4 24 433-456 84-107 (178)
362 3opt_A DNA damage-responsive t 55.7 9.2 0.00031 37.9 4.1 44 428-471 301-344 (373)
363 3llv_A Exopolyphosphatase-rela 55.4 18 0.0006 29.9 5.5 68 290-369 6-79 (141)
364 1kol_A Formaldehyde dehydrogen 54.6 12 0.00039 37.4 4.9 43 288-330 184-228 (398)
365 1piw_A Hypothetical zinc-type 53.9 9.4 0.00032 37.5 4.0 43 288-330 178-221 (360)
366 2ozj_A Cupin 2, conserved barr 53.8 10 0.00035 30.2 3.6 32 433-464 77-108 (114)
367 3c85_A Putative glutathione-re 53.3 24 0.00081 30.6 6.2 68 288-367 37-112 (183)
368 2c0z_A NOVW; isomerase, epimer 52.7 9.3 0.00032 35.0 3.4 28 439-467 117-144 (216)
369 2i45_A Hypothetical protein; n 52.5 12 0.00041 29.4 3.8 26 433-458 68-93 (107)
370 2pfw_A Cupin 2, conserved barr 52.3 11 0.00036 30.0 3.4 28 433-460 73-100 (116)
371 2oa2_A BH2720 protein; 1017534 52.1 6.3 0.00022 33.4 2.1 24 433-456 89-112 (148)
372 2xlg_A SLL1785 protein, CUCA; 51.6 8.6 0.0003 35.8 3.1 46 433-478 103-159 (239)
373 3h8u_A Uncharacterized conserv 51.6 5.5 0.00019 32.4 1.6 25 433-457 80-104 (125)
374 2y0o_A Probable D-lyxose ketol 51.4 11 0.00039 33.2 3.6 26 433-458 120-145 (175)
375 2fqp_A Hypothetical protein BP 50.4 6.9 0.00024 30.4 1.9 24 433-456 60-83 (97)
376 2g1u_A Hypothetical protein TM 50.0 26 0.00089 29.5 5.8 70 288-368 17-92 (155)
377 1uuf_A YAHK, zinc-type alcohol 49.7 12 0.00042 36.9 4.1 43 288-330 193-236 (369)
378 2opk_A Hypothetical protein; p 49.2 13 0.00045 29.8 3.5 23 434-456 75-97 (112)
379 1upi_A DTDP-4-dehydrorhamnose 49.1 10 0.00035 34.9 3.1 27 439-466 128-154 (225)
380 2uyo_A Hypothetical protein ML 48.9 34 0.0012 33.0 7.0 91 290-382 103-203 (310)
381 3iht_A S-adenosyl-L-methionine 48.9 30 0.001 30.0 5.7 44 277-320 28-72 (174)
382 3fjs_A Uncharacterized protein 48.1 13 0.00045 29.8 3.4 28 433-460 75-102 (114)
383 1oi6_A PCZA361.16; epimerase, 48.0 10 0.00035 34.5 2.8 27 439-466 109-135 (205)
384 1e3j_A NADP(H)-dependent ketos 48.0 17 0.00059 35.4 4.9 43 288-330 167-210 (352)
385 3lwc_A Uncharacterized protein 48.0 17 0.00058 29.6 4.0 24 433-456 78-101 (119)
386 2ozi_A Hypothetical protein RP 47.7 9.4 0.00032 30.1 2.3 25 433-457 60-84 (98)
387 2h6e_A ADH-4, D-arabinose 1-de 47.7 15 0.00051 35.7 4.3 42 289-330 170-214 (344)
388 1pqw_A Polyketide synthase; ro 47.3 14 0.00047 32.6 3.7 43 288-330 37-81 (198)
389 1yhf_A Hypothetical protein SP 46.8 16 0.00055 28.8 3.7 29 434-462 80-108 (115)
390 3bu7_A Gentisate 1,2-dioxygena 46.8 9.2 0.00031 38.5 2.6 24 433-456 333-356 (394)
391 3bcw_A Uncharacterized protein 46.0 14 0.00048 30.4 3.2 28 434-461 89-116 (123)
392 2vqa_A SLL1358 protein, MNCA; 45.8 7.7 0.00026 38.2 1.9 25 433-457 279-303 (361)
393 2q30_A Uncharacterized protein 44.9 13 0.00045 29.0 2.8 26 433-458 75-100 (110)
394 1y3t_A Hypothetical protein YX 44.8 13 0.00045 35.9 3.3 44 434-478 87-130 (337)
395 3nw4_A Gentisate 1,2-dioxygena 44.8 8.5 0.00029 38.3 1.9 24 433-456 143-166 (368)
396 3uog_A Alcohol dehydrogenase; 44.3 21 0.00073 35.0 4.9 43 288-330 188-231 (363)
397 3jv7_A ADH-A; dehydrogenase, n 44.3 19 0.00066 34.9 4.5 44 288-331 170-215 (345)
398 3ps9_A TRNA 5-methylaminomethy 44.0 30 0.001 37.1 6.4 78 291-368 68-187 (676)
399 3kgz_A Cupin 2 conserved barre 43.9 9.5 0.00033 32.9 1.9 25 433-457 83-107 (156)
400 3fpc_A NADP-dependent alcohol 43.8 20 0.00067 35.0 4.5 44 288-331 165-210 (352)
401 4e2g_A Cupin 2 conserved barre 43.7 14 0.00046 29.9 2.8 25 433-457 80-104 (126)
402 3fwz_A Inner membrane protein 43.1 34 0.0012 28.2 5.3 66 290-367 7-78 (140)
403 3abi_A Putative uncharacterize 43.0 49 0.0017 32.4 7.3 73 289-374 15-92 (365)
404 1wlt_A 176AA long hypothetical 42.9 18 0.00061 32.6 3.6 22 437-458 125-146 (196)
405 3ic5_A Putative saccharopine d 42.8 90 0.0031 24.0 7.7 70 290-371 5-80 (118)
406 1cdo_A Alcohol dehydrogenase; 42.5 18 0.00063 35.5 4.1 43 288-330 191-235 (374)
407 3ibm_A Cupin 2, conserved barr 41.7 13 0.00046 32.2 2.6 24 433-456 95-118 (167)
408 3mag_A VP39; methylated adenin 41.5 27 0.00091 33.4 4.7 45 279-323 47-99 (307)
409 3ryk_A DTDP-4-dehydrorhamnose 41.5 17 0.00057 33.0 3.2 22 437-458 130-151 (205)
410 2o8q_A Hypothetical protein; c 41.4 7.4 0.00025 32.0 0.8 40 433-473 84-123 (134)
411 2dq4_A L-threonine 3-dehydroge 41.4 21 0.00071 34.7 4.2 42 289-330 164-207 (343)
412 2pyt_A Ethanolamine utilizatio 41.2 22 0.00077 29.6 3.8 26 434-459 95-120 (133)
413 2vqa_A SLL1358 protein, MNCA; 41.0 12 0.00043 36.6 2.5 23 434-456 98-120 (361)
414 1vj0_A Alcohol dehydrogenase, 41.0 24 0.00082 34.9 4.6 42 289-330 195-238 (380)
415 3cew_A Uncharacterized cupin p 40.8 6.5 0.00022 32.0 0.3 24 433-456 67-90 (125)
416 3l2h_A Putative sugar phosphat 40.7 13 0.00043 31.9 2.2 25 433-457 87-112 (162)
417 1p0f_A NADP-dependent alcohol 40.2 19 0.00064 35.5 3.7 43 288-330 190-234 (373)
418 2jhf_A Alcohol dehydrogenase E 39.9 21 0.00072 35.1 4.1 43 288-330 190-234 (374)
419 3h8v_A Ubiquitin-like modifier 39.6 13 0.00045 35.7 2.3 36 287-322 33-70 (292)
420 4b7c_A Probable oxidoreductase 39.4 35 0.0012 32.8 5.5 41 288-328 148-190 (336)
421 1e3i_A Alcohol dehydrogenase, 39.1 22 0.00076 34.9 4.1 43 288-330 194-238 (376)
422 3ht1_A REMF protein; cupin fol 39.1 11 0.00039 31.1 1.7 24 433-456 80-103 (145)
423 3m6i_A L-arabinitol 4-dehydrog 39.0 26 0.00088 34.2 4.5 43 288-330 178-222 (363)
424 3uko_A Alcohol dehydrogenase c 39.0 19 0.00064 35.5 3.5 44 288-331 192-237 (378)
425 1lss_A TRK system potassium up 38.7 48 0.0016 26.7 5.6 69 290-369 4-78 (140)
426 2eih_A Alcohol dehydrogenase; 38.4 31 0.0011 33.4 4.9 42 289-330 166-209 (343)
427 2fzw_A Alcohol dehydrogenase c 38.1 21 0.00072 35.0 3.7 43 288-330 189-233 (373)
428 2e9q_A 11S globulin subunit be 37.7 28 0.00097 35.6 4.6 29 430-458 365-393 (459)
429 4ej6_A Putative zinc-binding d 37.7 30 0.001 34.0 4.8 44 288-331 181-226 (370)
430 1v3u_A Leukotriene B4 12- hydr 37.6 29 0.00099 33.4 4.6 42 288-329 144-187 (333)
431 2ea7_A 7S globulin-1; beta bar 37.2 14 0.00047 37.7 2.2 24 433-456 104-127 (434)
432 2dpm_A M.dpnii 1, protein (ade 36.9 51 0.0018 31.3 6.1 54 272-328 17-71 (284)
433 2pa7_A DTDP-6-deoxy-3,4-keto-h 36.9 13 0.00044 31.6 1.6 29 440-469 87-115 (141)
434 2d8a_A PH0655, probable L-thre 36.8 28 0.00096 33.8 4.3 42 289-330 167-210 (348)
435 1juh_A Quercetin 2,3-dioxygena 36.7 20 0.00067 35.3 3.2 45 433-478 95-139 (350)
436 2j3h_A NADP-dependent oxidored 36.5 26 0.00088 33.9 4.0 42 288-329 154-197 (345)
437 1y3t_A Hypothetical protein YX 36.4 21 0.00071 34.4 3.3 45 433-478 258-302 (337)
438 2hmt_A YUAA protein; RCK, KTN, 36.2 54 0.0018 26.4 5.5 68 289-369 5-79 (144)
439 2hcy_A Alcohol dehydrogenase 1 36.1 37 0.0013 32.8 5.1 43 288-330 168-212 (347)
440 3e8x_A Putative NAD-dependent 36.1 76 0.0026 28.3 7.0 79 288-379 19-103 (236)
441 1rjw_A ADH-HT, alcohol dehydro 35.9 39 0.0013 32.6 5.2 43 288-330 163-206 (339)
442 3jzv_A Uncharacterized protein 35.9 14 0.00049 32.1 1.8 24 433-456 92-115 (166)
443 2b8m_A Hypothetical protein MJ 35.5 24 0.00082 28.0 3.0 23 435-457 69-91 (117)
444 3i7d_A Sugar phosphate isomera 34.8 16 0.00054 31.6 1.9 25 433-457 84-110 (163)
445 1jvb_A NAD(H)-dependent alcoho 34.7 33 0.0011 33.3 4.4 43 288-330 169-214 (347)
446 4dvj_A Putative zinc-dependent 34.5 26 0.00091 34.3 3.7 42 289-330 171-215 (363)
447 2d40_A Z3393, putative gentisa 34.4 17 0.00057 35.9 2.2 24 433-456 140-163 (354)
448 2bnm_A Epoxidase; oxidoreducta 34.4 28 0.00096 30.6 3.6 23 433-455 163-185 (198)
449 3ip1_A Alcohol dehydrogenase, 34.1 37 0.0012 33.8 4.8 44 288-331 212-257 (404)
450 1j58_A YVRK protein; cupin, de 33.9 18 0.00062 35.8 2.4 25 433-457 302-326 (385)
451 1nxm_A DTDP-6-deoxy-D-XYLO-4-h 33.8 30 0.001 31.1 3.6 26 433-458 110-135 (197)
452 3c3v_A Arachin ARAH3 isoform; 33.7 28 0.00096 36.1 3.8 30 430-459 415-444 (510)
453 4eez_A Alcohol dehydrogenase 1 33.7 57 0.002 31.3 6.0 45 287-331 161-207 (348)
454 3gms_A Putative NADPH:quinone 33.5 21 0.0007 34.6 2.7 43 288-330 143-187 (340)
455 1jw9_B Molybdopterin biosynthe 33.4 12 0.0004 35.0 0.8 34 289-322 30-65 (249)
456 3h7j_A Bacilysin biosynthesis 33.3 18 0.00061 33.4 2.1 25 433-457 185-209 (243)
457 1h2b_A Alcohol dehydrogenase; 33.2 36 0.0012 33.2 4.5 43 288-330 185-229 (359)
458 3bu7_A Gentisate 1,2-dioxygena 32.8 19 0.00066 36.1 2.4 24 433-456 163-187 (394)
459 2d5f_A Glycinin A3B4 subunit; 32.7 35 0.0012 35.3 4.4 31 430-460 410-440 (493)
460 4a2c_A Galactitol-1-phosphate 32.5 70 0.0024 30.7 6.4 45 287-331 158-204 (346)
461 1o4t_A Putative oxalate decarb 32.4 18 0.00061 29.9 1.7 24 433-456 97-120 (133)
462 3l4b_C TRKA K+ channel protien 31.8 44 0.0015 29.8 4.5 64 293-367 3-72 (218)
463 3nx4_A Putative oxidoreductase 31.8 48 0.0016 31.6 5.1 39 292-330 149-189 (324)
464 1uij_A Beta subunit of beta co 31.8 20 0.00069 36.2 2.4 24 433-456 92-115 (416)
465 1iz0_A Quinone oxidoreductase; 31.5 23 0.00077 33.6 2.6 42 288-329 124-167 (302)
466 1lr5_A Auxin binding protein 1 31.5 20 0.00068 30.6 2.0 25 432-456 88-112 (163)
467 3bb6_A Uncharacterized protein 31.2 19 0.00065 30.0 1.6 34 432-465 65-98 (127)
468 1j58_A YVRK protein; cupin, de 31.0 37 0.0013 33.5 4.2 26 433-458 123-148 (385)
469 3h5n_A MCCB protein; ubiquitin 30.7 60 0.0021 31.8 5.6 33 289-321 117-151 (353)
470 1fxz_A Glycinin G1; proglycini 30.5 28 0.00096 35.8 3.2 43 428-470 379-421 (476)
471 1sby_A Alcohol dehydrogenase; 30.4 1.9E+02 0.0065 26.0 8.8 86 288-380 3-104 (254)
472 2d40_A Z3393, putative gentisa 30.3 36 0.0012 33.5 3.8 25 433-457 307-331 (354)
473 1tt5_B Ubiquitin-activating en 30.3 30 0.001 35.1 3.4 33 289-321 39-73 (434)
474 1y8q_A Ubiquitin-like 1 activa 29.9 26 0.0009 34.3 2.8 34 288-321 34-69 (346)
475 3nzo_A UDP-N-acetylglucosamine 29.7 1E+02 0.0035 30.4 7.3 84 289-373 34-125 (399)
476 2cf5_A Atccad5, CAD, cinnamyl 29.5 37 0.0013 33.1 3.8 41 289-329 180-221 (357)
477 3goh_A Alcohol dehydrogenase, 29.4 25 0.00084 33.6 2.4 42 288-330 141-183 (315)
478 3ksc_A LEGA class, prolegumin; 28.8 41 0.0014 34.7 4.1 31 430-460 401-431 (496)
479 3fz3_A Prunin; TREE NUT allerg 28.7 40 0.0014 35.1 3.9 32 430-461 437-468 (531)
480 2g1p_A DNA adenine methylase; 28.7 47 0.0016 31.4 4.2 52 272-327 10-62 (278)
481 4g65_A TRK system potassium up 28.6 48 0.0016 33.9 4.5 64 292-366 5-74 (461)
482 4fn4_A Short chain dehydrogena 28.4 76 0.0026 29.5 5.6 77 287-368 4-92 (254)
483 4i4a_A Similar to unknown prot 28.2 33 0.0011 27.5 2.7 24 433-456 73-96 (128)
484 3rns_A Cupin 2 conserved barre 27.9 33 0.0011 31.2 2.9 31 433-463 76-106 (227)
485 3eqe_A Putative cystein deoxyg 27.6 24 0.00083 30.9 1.8 32 433-464 118-149 (171)
486 1yb5_A Quinone oxidoreductase; 27.3 51 0.0018 32.0 4.4 42 289-330 170-213 (351)
487 1vj2_A Novel manganese-contain 27.2 19 0.00066 29.2 1.1 24 433-456 87-110 (126)
488 3jyo_A Quinate/shikimate dehyd 27.1 88 0.003 29.5 5.9 89 279-372 115-206 (283)
489 1y9q_A Transcriptional regulat 27.1 30 0.001 30.3 2.4 24 434-457 146-169 (192)
490 2c0c_A Zinc binding alcohol de 26.6 58 0.002 31.7 4.7 43 288-330 162-206 (362)
491 3fbt_A Chorismate mutase and s 26.4 2.8E+02 0.0095 26.0 9.3 81 276-372 107-190 (282)
492 3ius_A Uncharacterized conserv 26.4 1.2E+02 0.0041 27.8 6.7 66 291-371 6-74 (286)
493 3o38_A Short chain dehydrogena 26.2 1.1E+02 0.0037 27.9 6.3 80 288-371 20-112 (266)
494 4fgs_A Probable dehydrogenase 26.1 1.1E+02 0.0039 28.6 6.5 75 288-370 27-113 (273)
495 3pwz_A Shikimate dehydrogenase 26.1 1.6E+02 0.0054 27.6 7.4 75 287-372 117-193 (272)
496 2gm6_A Cysteine dioxygenase ty 25.9 32 0.0011 31.2 2.3 31 433-463 129-164 (208)
497 4g81_D Putative hexonate dehyd 25.9 79 0.0027 29.4 5.2 81 287-372 6-98 (255)
498 2gn4_A FLAA1 protein, UDP-GLCN 25.3 1.5E+02 0.0053 28.3 7.5 78 288-372 19-103 (344)
499 3l9w_A Glutathione-regulated p 25.3 60 0.002 32.6 4.5 66 290-367 4-75 (413)
500 4eye_A Probable oxidoreductase 25.2 42 0.0014 32.4 3.3 43 288-330 158-202 (342)
No 1
>3k2o_A Bifunctional arginine demethylase and lysyl-hydro JMJD6; structural genomics consortium, SGC, chromatin regulator, developmental protein; 1.75A {Homo sapiens} PDB: 3ld8_A 3ldb_A*
Probab=100.00 E-value=6e-62 Score=488.90 Aligned_cols=308 Identities=62% Similarity=1.138 Sum_probs=266.4
Q ss_pred cchHHHHhhHHhhhcCCCCCCCcccccccCcccccccccc-CCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCCCCCc
Q psy11730 11 LDSRARKRIKETKKRARPELNGKDAWFELGYADKFDKFKI-VKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWN 89 (496)
Q Consensus 11 ~~~~~~~~~~~~k~~~r~~~~~~~~w~~~~~~~~~~~~~~-~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~~~Wp 89 (496)
|++|++|||++||+|+||||..+.+|.+++|++++..++. ..++|+||+++.+|+++|.++|+.+++||||+|++.+||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~I~Ri~~~~lS~eeF~~~y~~~~~PvVi~g~~~~Wp 81 (336)
T 3k2o_A 2 MNHKSKKRIREAKRSARPELKDSLDWTRHNYYESFSLSPAAVADNVERADALQLSVEEFVERYERPYKPVVLLNAQEGWS 81 (336)
T ss_dssp CCHHHHHHHHHHHHHHCTTCCSHHHHHTTCHHHHCCCCGGGCCCCCCEEEGGGCCHHHHHHHTTTTTCCEEEESTTTTCT
T ss_pred CchHHHHHHHHHHHhcCccccccccccccchhhhhhhchhhcCCCCCEecCCCCCHHHHHHHhhccCCCEEEeCCcCCCh
Confidence 7899999999999999999998899999999999987764 789999999999999999999999999999999999999
Q ss_pred CCCCCCHHHHHhhcCCeeEEeeecCCCcc-ccCHHHHHHHhhcCCCC-CCCCcc-------ccccccccCCCCCCCchhh
Q psy11730 90 ATYKWTLEKLGKKYRNQKFKCGEDNHGYS-KLGKKYRNQKFKCGEDN-HGYSHP-------RRKKLLDDYEVPIYFQDDL 160 (496)
Q Consensus 90 A~~~Wt~~~L~~~~g~~~v~v~~~~~~~~-~m~~~~f~~~~~~~~~~-p~y~~~-------~~~~L~~d~~~P~~f~~d~ 160 (496)
|+++||.+||+++||+..|+|+..+.++. +|+|++|++++.+..++ |+|+++ ..|+|.+||.+|++|.+|+
T Consensus 82 A~~~Wt~~yL~~~~G~~~V~v~~~~~~~~~~m~~~~fl~~~~~~~~~~~lYL~d~~~~e~~~~p~L~~dy~~P~~f~~d~ 161 (336)
T 3k2o_A 82 AQEKWTLERLKRKYRNQKFKCGEDNDGYSVKMKMKYYIEYMESTRDDSPLYIFDSSYGEHPKRRKLLEDYKVPKFFTDDL 161 (336)
T ss_dssp HHHHCSHHHHHHHSTTCEEEEEECTTSCEEEEEHHHHHHHHHHCCCSSCCCEEESCGGGSTTGGGGGGGCCCCGGGCCCG
T ss_pred hHhhhhHHHHHHHhCCceEEEEecCCCceeeecHHHHHHHHHhcCCCCCceEecccccccccchhHHHhcCCCcccccch
Confidence 99999999999999999999998777777 99999999999988776 888753 3589999999999999999
Q ss_pred hcccCCCCCCCccceEecCCCCccccccCCCCCCCcccccCCCCCccccCCCCChhHHHHHHHHHhccccccccccccch
Q psy11730 161 FQYAGEDKRPPYRWFVMGPARSGTGIHIDPLGTNPDDGDVKDDSPAVESKEFKPIDEILTNIISELGKQVENLTSVSNIK 240 (496)
Q Consensus 161 ~~~~~~~~~p~~~w~~iG~~gs~T~lH~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 240 (496)
|++.++..+|+++|+|||++||+|++|+|++++++|++++.|+
T Consensus 162 ~~~~~~~~~p~~~~~~~G~~gs~t~~H~D~~~~~~~~~~v~G~------------------------------------- 204 (336)
T 3k2o_A 162 FQYAGEKRRPPYRWFVMGPPRSGTGIHIDPLGTSAWNALVQGH------------------------------------- 204 (336)
T ss_dssp GGGGCTTTSCCCEEEEEECTTCEEEEECCGGGCEEEEEEEESC-------------------------------------
T ss_pred hhhcccccCCCceEEEECCCCccCCcccCCCccceeeEEEeee-------------------------------------
Confidence 9988887899999999999999999999999998866666655
Q ss_pred hcccCCccccceeecccccCCCccccCceeeecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeC
Q psy11730 241 LLRTPLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDY 320 (496)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~ 320 (496)
T Consensus 205 -------------------------------------------------------------------------------- 204 (336)
T 3k2o_A 205 -------------------------------------------------------------------------------- 204 (336)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccccccchHhHhheeeecCCCCCcccEEEeec
Q psy11730 321 NQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWCLFPTHTPKDLLKVTSA 400 (496)
Q Consensus 321 s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~ 400 (496)
|.|.|+|+.....+......
T Consensus 205 ------------------------------------------------------------K~~~L~pP~~~~~ly~~~~~ 224 (336)
T 3k2o_A 205 ------------------------------------------------------------KRWCLFPTSTPRELIKVTRD 224 (336)
T ss_dssp ------------------------------------------------------------EEEEEECTTSCHHHHCCCHH
T ss_pred ------------------------------------------------------------EEEEEeCCCcchhcccCccc
Confidence 33334444322111111111
Q ss_pred cCCcccccccchhhHhcCCCCCCCCCCCCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhhHHHHhhc
Q psy11730 401 EGGKQRDEAITWFSIIYPRTQLPSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKTIR 480 (496)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~~~~~~~~ 480 (496)
.++......++|+...|+......||...++++++++|||+||||.||||+|.++++||+|++||++..|++.+|++|++
T Consensus 225 ~~~~~~~~~~~w~~~~~P~~~~~~~p~~~~~~~~~l~pGd~l~iP~gw~H~v~~~~~sisv~~~f~~~~nl~~~~~~~~~ 304 (336)
T 3k2o_A 225 EGGNQQDEAITWFNVIYPRTQLPTWPPEFKPLEILQKPGETVFVPGGWWHVVLNLDTTIAITQNFASSTNFPVVWHKTVR 304 (336)
T ss_dssp HHGGGTTCHHHHHHHTGGGGGSTTSCGGGCCEEEEECTTCEEEECTTCEEEEEESSCEEEEEEEECCTTTHHHHHHHHHH
T ss_pred ccCCCccchhhhhhhhCcchhhhcccccCceEEEEECCCCEEEeCCCCcEEEecCCCeEEEEcccCCcccHHHHHHHHHh
Confidence 11111234567888888877777788788999999999999999999999999999999999999999999999999999
Q ss_pred CCchhhHHHHHHHhc
Q psy11730 481 GRPKLSKKWYRKLKT 495 (496)
Q Consensus 481 ~~~~~~~~~~~~~~~ 495 (496)
|||||+++|+++|++
T Consensus 305 ~~p~~~~~~~~~~~~ 319 (336)
T 3k2o_A 305 GRPKLSRKWYRILKQ 319 (336)
T ss_dssp HCHHHHHHHHHHHHH
T ss_pred hChHHHHHHHHHHHH
Confidence 999999999999986
No 2
>2yu1_A JMJC domain-containing histone demethylation PROT; JMJC-domain-containing histone demethylases, oxidoreductase; HET: AKG; 2.70A {Homo sapiens} PDB: 2yu2_A
Probab=100.00 E-value=1.9e-36 Score=312.16 Aligned_cols=151 Identities=15% Similarity=0.156 Sum_probs=118.6
Q ss_pred cCCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCCCCCcC---CCCCCHHHHHhhcC-CeeEEeeecCCCcc-ccCHHH
Q psy11730 50 IVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWNA---TYKWTLEKLGKKYR-NQKFKCGEDNHGYS-KLGKKY 124 (496)
Q Consensus 50 ~~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~~~WpA---~~~Wt~~~L~~~~g-~~~v~v~~~~~~~~-~m~~~~ 124 (496)
...+.|+|++.+++|. +|+++ ..+++||||+|+ ++||| .++||.+||++++| +..|.|.++..++. +|+|++
T Consensus 49 ~~~~~V~ri~~~~Ls~-EF~~~-~~~nkPVVIt~~-~~Wpa~~P~~kWt~dyL~~~~G~d~~V~V~D~~~q~~~~M~l~e 125 (451)
T 2yu1_A 49 YNANFVTFMEGKDFNV-EYIQR-GGLRDPLIFKNS-DGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIEMTMAQ 125 (451)
T ss_dssp CBCCCCEECCGGGCSH-HHHHH-HCSCSCEEESSC-TTTTCBCCCTTCCHHHHHHHTCTTCCCCCEETTSSCCTTCCHHH
T ss_pred CCCCceEecccccCCH-HHHHh-cCCCCcEEEccC-cCCCCcCCcCCCCHHHHHHHcCCCceEeeEEcCCCcceeeeHHH
Confidence 3578999999999999 99998 678999999999 99999 78999999999999 58899987777666 999999
Q ss_pred HHHHhhcCCCC--CCCC-----cc--------ccccccccCC-CCCCCch-------hhhcccCCCCCCCc-cceEecCC
Q psy11730 125 RNQKFKCGEDN--HGYS-----HP--------RRKKLLDDYE-VPIYFQD-------DLFQYAGEDKRPPY-RWFVMGPA 180 (496)
Q Consensus 125 f~~~~~~~~~~--p~y~-----~~--------~~~~L~~d~~-~P~~f~~-------d~~~~~~~~~~p~~-~w~~iG~~ 180 (496)
|++|+.+..++ |+|+ ++ ..|.|.+++. +|.+|.+ |+|+.+++..+|++ +|+||||+
T Consensus 126 yidy~~~~~d~r~~LY~v~sLeF~~~~l~~~~~~P~l~~d~Dwv~~~~p~~l~~~~~d~f~~lge~~rP~~~r~~~mGp~ 205 (451)
T 2yu1_A 126 WTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKESQTESTNAILEMQYPKVQKYCLMSVR 205 (451)
T ss_dssp HHHHHTSCTTTCCSCEEEEEECCTTSTTGGGCBCCHHHHHHCHHHHHSCGGGCC-----------CCSCCCCCEEEEECT
T ss_pred HHHHHhhccccccchhhhcccccccccccccccCchhhhhhhcccccCchhhhhhhhhhhhhcccccCCchheEEEEccC
Confidence 99999988754 6665 22 2355555542 3333433 66777777788998 99999999
Q ss_pred CCccccccCCCCCCCcccccCCC
Q psy11730 181 RSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 181 gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
||+|++|+|++++++|++++.|+
T Consensus 206 gS~T~~H~D~~~ts~w~avi~Gr 228 (451)
T 2yu1_A 206 GCYTDFHVDFGGTSVWYHIHQGG 228 (451)
T ss_dssp TCEEEEECCGGGCEEEEEEEESC
T ss_pred CCCCCeEECCCCcchhhheecce
Confidence 99999999999999988888766
No 3
>4gjz_A Lysine-specific demethylase 8; JMJC, beta barrel, Fe(II) and 2-oxoglutarate binding, oxidor; HET: AKG BME; 1.05A {Homo sapiens} PDB: 4gjy_A* 4aap_A* 3uyj_A*
Probab=100.00 E-value=1.1e-34 Score=278.59 Aligned_cols=135 Identities=23% Similarity=0.327 Sum_probs=109.7
Q ss_pred ceeeecCCCCCHHHHHHHhcCCCCcEEEecCCCCCcCCCCCCHHHHHhhcCCeeEEeeecCC----C--ccccCHHHHHH
Q psy11730 54 NVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWNATYKWTLEKLGKKYRNQKFKCGEDNH----G--YSKLGKKYRNQ 127 (496)
Q Consensus 54 ~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~L~~~~g~~~v~v~~~~~----~--~~~m~~~~f~~ 127 (496)
+|+|++ .+|+++|+++|+.+++||||+|++.+|||+++||.+||++++|+..|++..... . ...|+|++|++
T Consensus 2 tipri~--~pS~~eF~~~y~~~~~Pvvi~g~~~~wpa~~~w~~~yL~~~~g~~~v~v~~~~~~~~~~~~~~~~~~~~~~~ 79 (235)
T 4gjz_A 2 TVPRLH--RPSLQHFREQFLVPGRPVILKGVADHWPCMQKWSLEYIQEIAGCRTVPVEVGSRYTDEEWSQTLMTVNEFIS 79 (235)
T ss_dssp BCCEEE--SCCHHHHHHHTTTTTCCEEEESSSTTSHHHHHCSHHHHHHHHTTSEEEEEEC-------CEEEEEEHHHHHH
T ss_pred CCCCCC--CCCHHHHHHHHhcCCCcEEEeCCCcCCcccccCCHHHHHHHcCCCeEEEEecCcccCCccceeeccHHHHHH
Confidence 799985 599999999999999999999999999999999999999999999999874322 1 12899999999
Q ss_pred HhhcCCCC-CCCC-----ccccccccccCCCCCCCchhhhcccCCCCCCCccceEecCCCCccccccCCCCCCC
Q psy11730 128 KFKCGEDN-HGYS-----HPRRKKLLDDYEVPIYFQDDLFQYAGEDKRPPYRWFVMGPARSGTGIHIDPLGTNP 195 (496)
Q Consensus 128 ~~~~~~~~-p~y~-----~~~~~~L~~d~~~P~~f~~d~~~~~~~~~~p~~~w~~iG~~gs~T~lH~D~~~~~~ 195 (496)
.+...... +.|+ ....++|.+|+.+|.++..+.+ ...+...++|||++||+|++|+|++.|.+
T Consensus 80 ~~~~~~~~~~~y~~~~~~~~~~~~l~~d~~~p~~~~~~~~-----~~~~~~~~~wiG~~gs~t~~H~D~~~n~~ 148 (235)
T 4gjz_A 80 KYIVNEPRDVGYLAQHQLFDQIPELKQDISIPDYCSLGDG-----EEEEITINAWFGPQGTISPLHQDPQQNFL 148 (235)
T ss_dssp HHTSSCCSSCEEEEEECHHHHCHHHHTTCCCCGGGGGSSS-----CGGGCEEEEEEECTTCEEEEECCSSEEEE
T ss_pred HHhhcCCcccceeehhhhhhhhHHHHHhhcCCcccccccc-----ccCccceEEEEeCCCCCceeeeccccceE
Confidence 87766554 4443 3456899999999987654432 13455678899999999999999987765
No 4
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=99.97 E-value=1.4e-31 Score=268.01 Aligned_cols=152 Identities=13% Similarity=0.076 Sum_probs=123.4
Q ss_pred ccCCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCC---CCCcCCCCCCHHHHHhhcC-CeeEEeeecCCCcc-ccCHH
Q psy11730 49 KIVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVT---ENWNATYKWTLEKLGKKYR-NQKFKCGEDNHGYS-KLGKK 123 (496)
Q Consensus 49 ~~~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~---~~WpA~~~Wt~~~L~~~~g-~~~v~v~~~~~~~~-~m~~~ 123 (496)
+++.+-|.||+.+++|.+.|.++.. ++||||++.. ..||+. +||.+++++.+| |..|+|.++..... +|+|+
T Consensus 13 ~~~~~~v~~i~~~d~t~~y~~~~~~--~~Pvli~~~~glg~~~P~~-~~tv~~v~~~vG~d~~V~ViDv~~Q~~~~M~l~ 89 (371)
T 3k3o_A 13 DSSDEVILKPTGNQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFTVRDVEHYVGSDKEIDVIDVTRQADCKMKLG 89 (371)
T ss_dssp BCCTTTSBCCCTTTCCHHHHHHHTT--CSCEEESSCTTSCCBCCCT-TCCHHHHHHHHCC-CEEEEEETTTTEEEEEEHH
T ss_pred CCHHHhcccCChhhCcHHHHHhcCC--CCCEEEecCcccCCcCCCC-CCCHHHHHHHcCCCceEeeeecCcCCCccccHH
Confidence 4456789999999999988877644 6999999754 689987 899999999999 88999998766555 99999
Q ss_pred HHHHHhhcCCCC-CCCCcc-cc--ccccccCCCCCCCch-hhhc-cc---CCCCCCC-ccceEecCCCCccccccCCCCC
Q psy11730 124 YRNQKFKCGEDN-HGYSHP-RR--KKLLDDYEVPIYFQD-DLFQ-YA---GEDKRPP-YRWFVMGPARSGTGIHIDPLGT 193 (496)
Q Consensus 124 ~f~~~~~~~~~~-p~y~~~-~~--~~L~~d~~~P~~f~~-d~~~-~~---~~~~~p~-~~w~~iG~~gs~T~lH~D~~~~ 193 (496)
+|++|+++..++ |+|+++ ++ ..|.++|.+|++|.+ |+++ +. +...+|+ ++|+|||++||+|++|+|++++
T Consensus 90 ~y~dY~~~~~re~~lnv~d~efs~~~L~~~~~~P~~~~d~d~~~~~wp~~~~~~rP~~~r~l~mGp~gS~T~~HiD~~gt 169 (371)
T 3k3o_A 90 DFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQKYCLMSVRDSYTDFHIDFGGT 169 (371)
T ss_dssp HHHHHHTCTTCCSCEEEEEEECTTSGGGGTCBCCHHHHHHCHHHHHSCSSCSSCCCCCSCEEEEECTTEEEEEECCGGGC
T ss_pred HHHHHHhccCCCCceeeechhccchhhhccccCCchhhhhhhhhhcCChhhhccCCCceeEEEEcCCCCCCCeEECCCCC
Confidence 999999998777 888754 22 258999999999986 5443 22 2346787 5999999999999999999999
Q ss_pred CCcccccCCC
Q psy11730 194 NPDDGDVKDD 203 (496)
Q Consensus 194 ~~~~~~~~~~ 203 (496)
++|++++.|+
T Consensus 170 s~w~~vv~Gr 179 (371)
T 3k3o_A 170 SVWYHVLKGE 179 (371)
T ss_dssp EEEEEEEEEE
T ss_pred ceeEEEeeeE
Confidence 9977777755
No 5
>3pua_A GRC5, PHD finger protein 2; alpha-ketoglutarate-Fe2+ dependent dioxygenases, histone TAI protein, protein binding; HET: OGA; 1.89A {Homo sapiens} PDB: 3pu3_A* 3ptr_B* 3pu8_B* 3pus_A*
Probab=99.97 E-value=2.2e-31 Score=268.07 Aligned_cols=173 Identities=13% Similarity=0.094 Sum_probs=131.9
Q ss_pred cCCCCCCCcccccccCccccccccccCCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCC---CCCcCCCCCCHHHHHh
Q psy11730 25 RARPELNGKDAWFELGYADKFDKFKIVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVT---ENWNATYKWTLEKLGK 101 (496)
Q Consensus 25 ~~r~~~~~~~~w~~~~~~~~~~~~~~~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~---~~WpA~~~Wt~~~L~~ 101 (496)
..+|-..++..|.+.-..++| ++..+-|.|++.++++.+-|.++. -++||||++.. ..||+ .+||.+++++
T Consensus 19 ~~~~~~~gs~~fi~~~~~~~~---~~~~~~v~~~~g~~f~~~yl~~~g--~~~Pvli~~~~glgm~~P~-~~~tv~~v~~ 92 (392)
T 3pua_A 19 DVKPVQNGSQLFIKELRSRTF---PSAEDVVARVPGSQLTLGYMEEHG--FTEPILVPKKDGLGLAVPA-PTFYVSDVEN 92 (392)
T ss_dssp --CCCCTTSHHHHHHHHHCCC---CBGGGTSEECCGGGCCHHHHHHHT--TCSCEEESSCTTTTCBCCC-TTCCHHHHHH
T ss_pred CCCcccCCCHHHHHHHHhCCC---CChHHeEecCChhhchHHHHHhcC--CCccEEEeCCccccCcCCC-CCCCHHHHHH
Confidence 345555666777776655554 334468899988899977665544 37999999754 68998 6899999999
Q ss_pred hcC-CeeEEeeecCCCcc-ccCHHHHHHHhhcCCCC-CCCCccc-c--ccccccCCCCCCCch-hhhc-cc---CCCCCC
Q psy11730 102 KYR-NQKFKCGEDNHGYS-KLGKKYRNQKFKCGEDN-HGYSHPR-R--KKLLDDYEVPIYFQD-DLFQ-YA---GEDKRP 170 (496)
Q Consensus 102 ~~g-~~~v~v~~~~~~~~-~m~~~~f~~~~~~~~~~-p~y~~~~-~--~~L~~d~~~P~~f~~-d~~~-~~---~~~~~p 170 (496)
.+| |..|+|.++..... +|+|++|++|+++..++ |+|+++. + ..|.+.|..|+++.+ |+.. +. ....+|
T Consensus 93 ~vG~d~~V~ViDv~~Q~~~~M~l~~yv~Y~~~~~re~~lnv~dlefs~t~L~~~~~~P~lv~d~d~v~~~wp~~~~~~rP 172 (392)
T 3pua_A 93 YVGPERSVDVTDVTKQKDCKMKLKEFVDYYYSTNRKRVLNVTNLEFSDTRMSSFVEPPDIVKKLSWVENYWPDDALLAKP 172 (392)
T ss_dssp HHCTTCEEEEEETTTTEEEEEEHHHHHHHHTCSSCCSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHHHHSCTTCSSCCC
T ss_pred HcCCCcEEeeeecCcCcCccccHHHHHHHHhccCCCcceEeeecccccchhhccccCchhhhhhhhhhhccchhhhhcCC
Confidence 999 89999998776655 99999999999998777 8887651 1 247888888887765 4322 21 224577
Q ss_pred C-ccceEecCCCCccccccCCCCCCCcccccCCC
Q psy11730 171 P-YRWFVMGPARSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 171 ~-~~w~~iG~~gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
+ ++|++||++||+|++|+|+.++++|++++.|+
T Consensus 173 ~v~r~~~mGp~gS~T~fHiD~~gTs~w~~vi~Gr 206 (392)
T 3pua_A 173 KVTKYCLICVKDSYTDFHIDSGGASAWYHVLKGE 206 (392)
T ss_dssp SCSCEEEEECTTCEEEEECCGGGCEEEEEEEEEE
T ss_pred CceeEEEEeCCCCCCCEeECCCCCceeeeeccce
Confidence 7 99999999999999999999999977776654
No 6
>3kv9_A JMJC domain-containing histone demethylation protein 1D; jumonji domain lysine demethylase, metal-binding, zinc, zinc-finger; 2.29A {Homo sapiens} PDB: 3kva_A* 3kvb_A* 3u78_A*
Probab=99.97 E-value=1.1e-30 Score=263.86 Aligned_cols=170 Identities=14% Similarity=0.105 Sum_probs=130.7
Q ss_pred CCCCCcccccccCccccccccccCCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCC---CCCcCCCCCCHHHHHhhcC
Q psy11730 28 PELNGKDAWFELGYADKFDKFKIVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVT---ENWNATYKWTLEKLGKKYR 104 (496)
Q Consensus 28 ~~~~~~~~w~~~~~~~~~~~~~~~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~---~~WpA~~~Wt~~~L~~~~g 104 (496)
|...++..|.+..-+.+| +...+.|.|++.+++|.+-|.++. -++||||++.. ..||+ .+||.+++++.+|
T Consensus 23 ~~~~g~~~f~~~~~~~~~---~~~~~~v~~i~g~d~t~~y~~~~~--~~~Pvli~~~~glg~~~P~-~~~tv~~v~~~vG 96 (397)
T 3kv9_A 23 PVQAGTRTFIKELRSRVF---PSADEIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFSVMDVERYVG 96 (397)
T ss_dssp CCCTTSHHHHHHHHHCCC---CBGGGTCEECCTTTCCHHHHHHHC--SCSCEEESSCTTSCCBCCC-TTCCHHHHHHHHT
T ss_pred ccccCchHHHHHHhcCCC---CChhHeeecCCHHHhhHHHHHhcC--CCCcEEEecCccccCcCCC-CCCCHHHHHHHhC
Confidence 555555666654333333 334568999999999988665543 37999999864 58999 7999999999999
Q ss_pred -CeeEEeeecCCCcc-ccCHHHHHHHhhcCCCC-CCCCccc---cccccccCCCCCCCch-hhhc-ccCC---CCCCC-c
Q psy11730 105 -NQKFKCGEDNHGYS-KLGKKYRNQKFKCGEDN-HGYSHPR---RKKLLDDYEVPIYFQD-DLFQ-YAGE---DKRPP-Y 172 (496)
Q Consensus 105 -~~~v~v~~~~~~~~-~m~~~~f~~~~~~~~~~-p~y~~~~---~~~L~~d~~~P~~f~~-d~~~-~~~~---~~~p~-~ 172 (496)
+..|+|.++..... +|+|++|++|+++..++ |+|+++. ...|.++|.+|++|.+ |++. +..+ ..+|. .
T Consensus 97 ~d~~V~ViDv~~Q~~~~M~l~~yv~Y~~~~~r~~~lnvislefs~~~L~~~~~~P~~v~d~Dwv~~~wp~~~~~~rP~v~ 176 (397)
T 3kv9_A 97 GDKVIDVIDVARQADSKMTLHNYVKYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQ 176 (397)
T ss_dssp TTSEEEEEETTTTEEEEEEHHHHHHHHHCSSCSSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCS
T ss_pred CCceEeeeecCcccCccccHHHHHHHHhccCCCccceecchhhccchhccCcCCCceeeccchhhhcCCchhccCCccce
Confidence 89999998876655 99999999999988776 8775431 1358999999999985 6543 2222 23553 6
Q ss_pred cceEecCCCCccccccCCCCCCCcccccCCC
Q psy11730 173 RWFVMGPARSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 173 ~w~~iG~~gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
+|+|||++||+|++|+|+.++++|++++.|+
T Consensus 177 r~l~mGp~gS~T~~HiD~~gts~w~~vv~Gr 207 (397)
T 3kv9_A 177 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWGE 207 (397)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEEE
T ss_pred eEEEEcCCCCCCCEEECCCCCceeeeecCce
Confidence 9999999999999999999999977777755
No 7
>3al5_A HTYW5, JMJC domain-containing protein C2ORF60; tRNA modification enzyme, unknown function; 2.50A {Homo sapiens} PDB: 3al6_A*
Probab=99.96 E-value=7.7e-31 Score=265.21 Aligned_cols=139 Identities=19% Similarity=0.226 Sum_probs=109.7
Q ss_pred CCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCCCCCcCCCCCCHHHHHhhcCCeeEEeeecCC----------Ccccc
Q psy11730 51 VKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWNATYKWTLEKLGKKYRNQKFKCGEDNH----------GYSKL 120 (496)
Q Consensus 51 ~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~L~~~~g~~~v~v~~~~~----------~~~~m 120 (496)
...+|+|++ .+|+++|.++|..+++||||+| +.+|||.++||++||++++|+..|+|..... .+..|
T Consensus 27 ~~~~I~r~~--~lS~~eF~~~y~~~~kPvVi~g-~~~wpa~~~Ws~dyL~~~~g~~~V~v~~~~~~~~~~~~~~~~~~~~ 103 (338)
T 3al5_A 27 QHLPVPRLE--GVSREQFMQHLYPQRKPLVLEG-IDLGPCTSKWTVDYLSQVGGKKEVKIHVAAVAQMDFISKNFVYRTL 103 (338)
T ss_dssp CCCBCCEEE--SCCHHHHHHHTGGGCCCEEEES-CCCCTHHHHCCHHHHHHHHCSCEEEEEC----CCCC-CCCCCEEEE
T ss_pred CCCCCCEEC--CCCHHHHHHHhhcCCCeEEEeC-CCCCcccccCCHHHHHHhhCCceEEEEEcCCCCcccccccceeEEe
Confidence 556899985 5999999999999999999999 7999999999999999999999999975332 12389
Q ss_pred CHHHHHHHhhcCCCC--------CCCCc--------------cccccccccCCCCCCCchhhhcccCCCCCCCccceEec
Q psy11730 121 GKKYRNQKFKCGEDN--------HGYSH--------------PRRKKLLDDYEVPIYFQDDLFQYAGEDKRPPYRWFVMG 178 (496)
Q Consensus 121 ~~~~f~~~~~~~~~~--------p~y~~--------------~~~~~L~~d~~~P~~f~~d~~~~~~~~~~p~~~w~~iG 178 (496)
+|++|++++....+. ++|+. .++|.|.+||.+|.+|..|.+. ..|+|||
T Consensus 104 ~f~efl~~~~~~~~~~~l~~~~~~~Yl~~~~~~~~~~~~~l~~~~p~L~~d~~~P~~~~~d~~~---------~s~l~~g 174 (338)
T 3al5_A 104 PFDQLVQRAAEEKHKEFFVSEDEKYYLRSLGEDPRKDVADIRKQFPLLKGDIKFPEFFKEEQFF---------SSVFRIS 174 (338)
T ss_dssp EHHHHHHHHHC-CCSSCSSCTTCCCEEECCCSSTTTCCCCHHHHCHHHHTTCCCCCCSCGGGEE---------EEEEEEE
T ss_pred EHHHHHHHHHhccccccccCCCcccchhhcccccccchhhHhHHCHHHHHhcCCCccccccccc---------cceeEEC
Confidence 999999998765432 34442 2468899999999998776431 2378899
Q ss_pred CCCCccccccCCCCCCCcccccCCC
Q psy11730 179 PARSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 179 ~~gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
++|++|++|+|++.|.. +|+.|+
T Consensus 175 ~~g~~~~~H~D~~~n~~--~qv~G~ 197 (338)
T 3al5_A 175 SPGLQLWTHYDVMDNLL--IQVTGK 197 (338)
T ss_dssp CTTCEEEEECCSSEEEE--EECSSC
T ss_pred CCCCCccceECCcccEE--EEEEEE
Confidence 99999999999987655 444433
No 8
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=99.96 E-value=6.8e-30 Score=263.12 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=127.4
Q ss_pred CCCCCcccccccCccccccccccCCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCC---CCCcCCCCCCHHHHHhhcC
Q psy11730 28 PELNGKDAWFELGYADKFDKFKIVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVT---ENWNATYKWTLEKLGKKYR 104 (496)
Q Consensus 28 ~~~~~~~~w~~~~~~~~~~~~~~~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~---~~WpA~~~Wt~~~L~~~~g 104 (496)
|-..++..|.+..-+.+| ++..+-|.+++.++++.+-|.++.. ++||||++.. ..||+. +||.+++++.+|
T Consensus 79 p~~~Gs~~fI~~l~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~--~~Pvli~~~~glgm~~P~~-~~tv~~v~~~~G 152 (447)
T 3kv4_A 79 PVKTGSPTFVRELRSRTF---DSSDEVILKPTGNQLTVEFLEENSF--SVPILVLKKDGLGMTLPSP-SFTVRDVEHYVG 152 (447)
T ss_dssp CCCTTSHHHHHHHHTCCC---EEGGGTCBCCCTTTCCHHHHHHTTS--CSCEEESSCTTSCCBCCCT-TCCHHHHHHHHC
T ss_pred ccccccHHHHHHHhcCcC---CChhHeeeccchhhchHHHHHhcCC--CCCEEEecCcccCCcCCCc-cCCHHHHHHHcC
Confidence 333445555554323332 3333456677778888666655433 7999999544 689986 899999999999
Q ss_pred -CeeEEeeecCCCcc-ccCHHHHHHHhhcCCCC-CCCCcc-cc--ccccccCCCCCCCch-hhhccc----CCCCCCC-c
Q psy11730 105 -NQKFKCGEDNHGYS-KLGKKYRNQKFKCGEDN-HGYSHP-RR--KKLLDDYEVPIYFQD-DLFQYA----GEDKRPP-Y 172 (496)
Q Consensus 105 -~~~v~v~~~~~~~~-~m~~~~f~~~~~~~~~~-p~y~~~-~~--~~L~~d~~~P~~f~~-d~~~~~----~~~~~p~-~ 172 (496)
+..|+|.++..... +|+|++|++|+++..++ |+|+++ ++ ..|.++|.+|++|.+ |+++.+ ....+|+ +
T Consensus 153 ~d~~V~ViDv~~Q~~~~M~l~~y~dy~~~~~r~~~lnv~d~efs~~~L~~~~~~P~~~~~~D~~~~lw~~~~~~~rP~v~ 232 (447)
T 3kv4_A 153 SDKEIDVIDVTRQADCKMKLGDFVKYYYSGKREKVLNVISLEFSDTRLSNLVETPKIVRKLSWVENLWPEECVFERPNVQ 232 (447)
T ss_dssp TTCEEEEEETTTTEEEEEEHHHHHHHHHSSCCSSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHHHHCCSCTTSCCCCCS
T ss_pred CCceEcceecCcCccccccHHHHHHHHhccCCCCceeecccccccchhhhccCCCceecccchhhhcccchhhccCCCce
Confidence 88999998766555 99999999999988776 888754 11 269999999999986 555422 2345776 9
Q ss_pred cceEecCCCCccccccCCCCCCCcccccCCC
Q psy11730 173 RWFVMGPARSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 173 ~w~~iG~~gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
+|+|||++||+|++|+|++++++|++++.|+
T Consensus 233 r~~~mG~~gS~T~~HiD~~~ts~w~~vi~Gr 263 (447)
T 3kv4_A 233 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKGE 263 (447)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEESE
T ss_pred eEEEEeCCCCCCCeeECCCCCceeEEEeeeE
Confidence 9999999999999999999999977777755
No 9
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=99.96 E-value=2.6e-29 Score=262.76 Aligned_cols=149 Identities=13% Similarity=0.074 Sum_probs=118.3
Q ss_pred CCceeeecCCCCCHHHHHHHhcCCCCcEEEecCC---CCCcCCCCCCHHHHHhhcC-CeeEEeeecCCCcc-ccCHHHHH
Q psy11730 52 KENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVT---ENWNATYKWTLEKLGKKYR-NQKFKCGEDNHGYS-KLGKKYRN 126 (496)
Q Consensus 52 ~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~---~~WpA~~~Wt~~~L~~~~g-~~~v~v~~~~~~~~-~m~~~~f~ 126 (496)
.+-|.|++.++++.+.|.++. -++||||++.. ..||+ .+||.+|+++.+| |..|+|.++..... +|+|++|+
T Consensus 135 ~~~v~~~~~~~~~~~~~~~~~--~~~Pvli~~~~~lg~~~P~-~~~t~~~v~~~~G~d~~V~V~Dv~~Q~~~~m~l~~yi 211 (488)
T 3kv5_D 135 DEIIIKMHGSQLTQRYLEKHG--FDVPIMVPKLDDLGLRLPS-PTFSVMDVERYVGGDKVIDVIDVARQADSKMTLHNYV 211 (488)
T ss_dssp GGTCEECCGGGCCHHHHHHHC--SCSCEEECSCTTTCCBCCC-TTCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHH
T ss_pred hheeeccccccchHHHHHhcC--CCCCEEEecCCCcCCcCCC-CCCcHHHHHHHhCCCceeeeeecCccccccccHHHHH
Confidence 456899888899988776543 37999999764 58999 7899999999999 89999998776655 99999999
Q ss_pred HHhhcCCCC-CCCCccc---cccccccCCCCCCCch-hhhcc-cCC---CCCCC-ccceEecCCCCccccccCCCCCCCc
Q psy11730 127 QKFKCGEDN-HGYSHPR---RKKLLDDYEVPIYFQD-DLFQY-AGE---DKRPP-YRWFVMGPARSGTGIHIDPLGTNPD 196 (496)
Q Consensus 127 ~~~~~~~~~-p~y~~~~---~~~L~~d~~~P~~f~~-d~~~~-~~~---~~~p~-~~w~~iG~~gs~T~lH~D~~~~~~~ 196 (496)
+|+++..++ ++|+.+. ...|.++|.+|.+|.+ |+++. ..+ ..+|. .+|+|||++||+|++|+|++++++|
T Consensus 212 ~y~~~~~r~~~~nv~slefs~~~L~~~~~~P~~~~~~d~~~~~wp~~~~~~rP~~~r~~~mG~~gS~T~~H~D~~~t~~w 291 (488)
T 3kv5_D 212 KYFMNPNRPKVLNVISLEFSDTKMSELVEVPDIAKKLSWVENYWPDDSVFPKPFVQKYCLMGVQDSYTDFHIDFGGTSVW 291 (488)
T ss_dssp HHHHSSSCSSCEEEEEEECTTSGGGGGCBCCHHHHHHCHHHHHCCTTCSSCCCCCSCEEEEECTTCEEEEECCGGGCEEE
T ss_pred HHHhccCCcccccccccccccchhhccCCCChhhhhhchhhhcCcccccccCcccceEEEEcCCCCCCCeEECCCCCcee
Confidence 999987666 7665431 2368999999999865 55432 221 23555 5999999999999999999999997
Q ss_pred ccccCCC
Q psy11730 197 DGDVKDD 203 (496)
Q Consensus 197 ~~~~~~~ 203 (496)
.+++.|+
T Consensus 292 ~~vv~G~ 298 (488)
T 3kv5_D 292 YHVLWGE 298 (488)
T ss_dssp EEEEEEE
T ss_pred eeccCee
Confidence 7777755
No 10
>3d8c_A Hypoxia-inducible factor 1 alpha inhibitor; FIH, HIF, DSBH, oxygenase, transcription, inhibitor oxoglutarate, asparaginyl hydroxylase; HET: AKG; 2.10A {Homo sapiens} PDB: 2ilm_A* 2w0x_A* 1h2l_A* 1h2m_A* 1h2n_A* 1yci_A* 2cgn_A 2cgo_A* 1h2k_A* 2wa3_A* 2wa4_A* 3od4_A* 3p3n_A* 3p3p_A* 2yc0_A* 2y0i_A* 2yde_A* 1mze_A* 1mzf_A* 2xum_A* ...
Probab=99.94 E-value=1e-27 Score=243.20 Aligned_cols=143 Identities=16% Similarity=0.193 Sum_probs=99.1
Q ss_pred CCCceeeecCCCCCHHHHHHHhcCCCCcEEEecCCCCCcCCCCCCHHHHHhhcCCeeEEeeecCCC--------------
Q psy11730 51 VKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWNATYKWTLEKLGKKYRNQKFKCGEDNHG-------------- 116 (496)
Q Consensus 51 ~~~~I~Ri~~~~ls~eeF~~~y~~~~~PvVi~g~~~~WpA~~~Wt~~~L~~~~g~~~v~v~~~~~~-------------- 116 (496)
...+|+|+ +.+|++ | ++|+.+++||||+|++.+||| ++||.+||+++||+..|+|.....+
T Consensus 38 ~~~~I~Rv--~~~s~~-~-~~y~~~~~PVVi~g~~~~wpA-~kWt~eyL~~~~G~~~V~V~~~~~~~~~y~d~~~~~~~~ 112 (349)
T 3d8c_A 38 PTRPIPRL--SQSDPR-A-EELIENEEPVVLTDTNLVYPA-LKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANFQ 112 (349)
T ss_dssp CEEECCEE--CTTCHH-H-HHHHHTTCCEEESCCCTTGGG-GGCCHHHHHHHSCSSCEEEEEESSSBCCCCCGGGTTSCT
T ss_pred CCCCceEe--cCCChh-H-HHHhcCCccEEEeCCCCCccc-ccCCHHHHHHhhCCCeEEEEECCCCcccccccccccccc
Confidence 34689998 457777 5 789999999999999999999 8999999999999999999754322
Q ss_pred -c------cccCHHHHHHHhhcCC---CC-CCCCccc-----cccccccCCCCCCCchhhhc-ccCCC-CCCCc-cceEe
Q psy11730 117 -Y------SKLGKKYRNQKFKCGE---DN-HGYSHPR-----RKKLLDDYEVPIYFQDDLFQ-YAGED-KRPPY-RWFVM 177 (496)
Q Consensus 117 -~------~~m~~~~f~~~~~~~~---~~-p~y~~~~-----~~~L~~d~~~P~~f~~d~~~-~~~~~-~~p~~-~w~~i 177 (496)
+ ..|+|++|++++.+.. ++ ++|+.+. .+.|.+||..+ ..++.. ..... ..+.+ .++||
T Consensus 113 ~F~~~~~~~~m~~~efl~~~~~~~~~~~~~~~YL~~~~~~~~~~~l~~D~~~~---~~~~~~~~~~~~~~~~~~~~~l~i 189 (349)
T 3d8c_A 113 NFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMDFLGF---NWNWINKQQGKRGWGQLTSNLLLI 189 (349)
T ss_dssp TCCCSEEEEEECHHHHHHHHHHHHHHTCCCEEEEEEECCTTSCHHHHHHHHTS---CHHHHHHHHHHTTCCCEEECEEEE
T ss_pred cccccceeEeeEHHHHHHHHHhhcccCCCCCeeeecccccccchhhhhhhhcc---chhhhhhhhhccccCccccceEEE
Confidence 1 2899999999988742 23 6777542 23455555321 112111 00000 11222 46899
Q ss_pred cCCCCccccccCCCCCCCcccccCCC
Q psy11730 178 GPARSGTGIHIDPLGTNPDDGDVKDD 203 (496)
Q Consensus 178 G~~gs~T~lH~D~~~~~~~~~~~~~~ 203 (496)
|++||+|++|+|++.+.. +|+.|+
T Consensus 190 G~~gs~t~~H~D~~~n~~--~qv~G~ 213 (349)
T 3d8c_A 190 GMEGNVTPAHYGEQQNFF--AQIKGY 213 (349)
T ss_dssp ECTTCEEEEECCSEEEEE--EEEESC
T ss_pred ECCCCCccceECChhcEE--EEEece
Confidence 999999999999985444 444443
No 11
>3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A*
Probab=99.80 E-value=2.3e-20 Score=192.73 Aligned_cols=137 Identities=18% Similarity=0.191 Sum_probs=100.0
Q ss_pred CHHHHHHHhcCCC------CcEEEe---cCCCCCcCCCCCCHHHHHhhcC-CeeEEeeecCCCcc-ccCHHHHHHHhhcC
Q psy11730 64 SPQEFIEKYEKPN------KPVVIK---GVTENWNATYKWTLEKLGKKYR-NQKFKCGEDNHGYS-KLGKKYRNQKFKCG 132 (496)
Q Consensus 64 s~eeF~~~y~~~~------~PvVi~---g~~~~WpA~~~Wt~~~L~~~~g-~~~v~v~~~~~~~~-~m~~~~f~~~~~~~ 132 (496)
+-.+|..+|...+ +|++|+ |+...-|. ...|.+.+.+..| +..|.|-++..... .|+|++|++|+.+.
T Consensus 152 dG~~f~~~~~~~~g~~~f~~p~lv~~~dgLgm~~P~-~~ftv~dV~~~vG~d~~VdVIDV~tQ~~~~mtl~~~~~yf~~~ 230 (528)
T 3pur_A 152 DGYEFRREFEKLGGADNWGKVFMVKDMDGLNMTMPK-PGFDLEDVVKIMGSDYEVDTIDVYNQSTYSMKLDTFRKLFRDT 230 (528)
T ss_dssp EHHHHHHHHHHTTCGGGCCSEEEEEECTTSCCCCCC-TTCCHHHHHHHHCTTCEEEEEETTTTEEEEEEHHHHHHHHHCC
T ss_pred CchhhHHHHHhhcCcccCCeeEEEeccccCCCCCCC-CCCCHHHHHHhhCCCceEeeEECCCCCCCcCcHHHHHHHhcCc
Confidence 5677777776543 699999 44344553 2588999999987 77899988776655 99999999999874
Q ss_pred C-CC-CCCC----ccccccccccCCCCCCCch-hhhccc-C------------------CCCCCCc-cceEecCCCCccc
Q psy11730 133 E-DN-HGYS----HPRRKKLLDDYEVPIYFQD-DLFQYA-G------------------EDKRPPY-RWFVMGPARSGTG 185 (496)
Q Consensus 133 ~-~~-p~y~----~~~~~~L~~d~~~P~~f~~-d~~~~~-~------------------~~~~p~~-~w~~iG~~gs~T~ 185 (496)
. .+ .+++ +...+.|.+.+..|.++++ |+...+ + +..+|++ +|++||++||+|.
T Consensus 231 ~~R~~i~NviSLEfS~~~~L~~~v~~P~~Vr~ld~v~~~Wp~~~~~~~~~~~~~~~~~~~~~rP~v~rf~lmg~~gS~Td 310 (528)
T 3pur_A 231 KNRPLLYNFLSLEFSDNNEMKEIAKPPRFVQEISMVNRLWPDVSGAEYIKLLQREEYLPEDQRPKVEQFCLAGMAGSYTD 310 (528)
T ss_dssp SCCSSCEEECCEECTTSTTHHHHSCCCHHHHHHCHHHHHSCCC-------------CCCGGGSCCCSSEEEEECTTEEEE
T ss_pred cccceeeEEeeEEecCchhhhccccCCcEEecccHHHHhcCcccchhhhhhhhcccccccccCCCeeEEEEEeCCCCCCC
Confidence 2 22 4443 2344678888999999876 543221 1 1257776 9999999999999
Q ss_pred cccCCCCCCCcccccC
Q psy11730 186 IHIDPLGTNPDDGDVK 201 (496)
Q Consensus 186 lH~D~~~~~~~~~~~~ 201 (496)
+|+|+.++++|...+.
T Consensus 311 ~HiD~~gts~w~~v~~ 326 (528)
T 3pur_A 311 FHVDFGGSSVYYHILK 326 (528)
T ss_dssp EECCGGGCEEEEEEEE
T ss_pred eeECCCCCceeEEEec
Confidence 9999999998444444
No 12
>1vrb_A Putative asparaginyl hydroxylase; 2636534, structural genomi center for structural genomics, JCSG, protein structure INI PSI, oxidoreductase; 2.60A {Bacillus subtilis} SCOP: b.82.2.11
Probab=99.53 E-value=6.4e-15 Score=148.55 Aligned_cols=121 Identities=14% Similarity=0.128 Sum_probs=69.3
Q ss_pred CCCCHHHHHHHhcCCCCcEEEecCCCCC-cCCCCCCHHHHHhhcCC-----eeEEee-ec--CCCc----c-ccCHHHHH
Q psy11730 61 KDYSPQEFIEKYEKPNKPVVIKGVTENW-NATYKWTLEKLGKKYRN-----QKFKCG-ED--NHGY----S-KLGKKYRN 126 (496)
Q Consensus 61 ~~ls~eeF~~~y~~~~~PvVi~g~~~~W-pA~~~Wt~~~L~~~~g~-----~~v~v~-~~--~~~~----~-~m~~~~f~ 126 (496)
..+|+++|.++|. .++||||+|+ .+| ++ .|+.++|.+.+++ ..|++. .. ...+ . .+++.+|.
T Consensus 26 ~~is~e~F~~~yw-~kkPlvir~~-~~~~~~--l~s~~~L~~l~~~~~v~~~~vrl~~~~~~~~~~~~~~g~~~~~~~~~ 101 (342)
T 1vrb_A 26 SPVTMSEFLEEYW-PVKPLVARGE-VERFTS--IPGFEKVRTLENVLAIYNNPVMVVGDAVIEESEGITDRFLVSPAEAL 101 (342)
T ss_dssp TTSCHHHHHHHTT-TTSCEEECCC-GGGGGG--STTCGGGSSHHHHHHHCCSCEEEC-------------CEEECHHHHH
T ss_pred cCCCHHHHHHHHh-ccCCEEEcCC-cccccC--CCCHHHHHHHHhhcCcCcCceEEeCCCcCccccccCCCcccCHHHHH
Confidence 6799999999999 5899999999 775 44 6777776665443 234432 11 1112 1 46778887
Q ss_pred HHhhcCCCCC-CCCccccc---cccccCCC-CCCCchhhhcccCCCCCCCccceEecCCCCccccccCCCCCCC
Q psy11730 127 QKFKCGEDNH-GYSHPRRK---KLLDDYEV-PIYFQDDLFQYAGEDKRPPYRWFVMGPARSGTGIHIDPLGTNP 195 (496)
Q Consensus 127 ~~~~~~~~~p-~y~~~~~~---~L~~d~~~-P~~f~~d~~~~~~~~~~p~~~w~~iG~~gs~T~lH~D~~~~~~ 195 (496)
+.......-- .......| +|.+++.. |.+. ++ .+ ....+|+||+|++|++|+|++.+..
T Consensus 102 ~l~~~g~tl~v~~~~~~~p~l~~l~~~~~~~~~~~-------~~--~n-~~~~~~~gp~g~~~~~H~D~~dnfl 165 (342)
T 1vrb_A 102 EWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLP-------AG--TS-SKAIVYAAKNGGGFKAHFDAYTNLI 165 (342)
T ss_dssp HHHHTTCCEEECCGGGTCTHHHHHHHHHHHHTTCC-------TT--CC-EEEEEEEECSSCCCCSEECSSEEEE
T ss_pred HHHhCCCeEEECChhHhChHHHHHHHhhhhhcCCc-------cc--cc-ccceEEEeCCCCCCCCeECChhcEE
Confidence 7655321100 11111122 33333321 2110 00 00 0123778999999999999998777
No 13
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.49 E-value=5.9e-15 Score=150.26 Aligned_cols=165 Identities=17% Similarity=0.220 Sum_probs=111.3
Q ss_pred cchhcccCCccccceeecccccCCCccccCceeeecchHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHccCCeEE
Q psy11730 238 NIKLLRTPLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMNGAAHVS 316 (496)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~~~~~v~ 316 (496)
.....++.||+.|....+|++|+.+.+++..|+ +.|..+. .++|+.|||||||+|.+++.+|+.|+++|+
T Consensus 40 ~~~~~d~~Yf~sY~~~~iH~~ML~D~~Rt~aY~---------~Ai~~~~~~~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ 110 (376)
T 4hc4_A 40 TKRERDQLYYECYSDVSVHEEMIADRVRTDAYR---------LGILRNWAALRGKTVLDVGAGTGILSIFCAQAGARRVY 110 (376)
T ss_dssp ---------CCCHHHHHHHHHHHHCHHHHHHHH---------HHHHTTHHHHTTCEEEEETCTTSHHHHHHHHTTCSEEE
T ss_pred ccccchhhhhhhccCcHHHHHHhCCHHHHHHHH---------HHHHhCHHhcCCCEEEEeCCCccHHHHHHHHhCCCEEE
Confidence 445667799999999999999999998877665 3333322 247899999999999999999999999999
Q ss_pred EEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccccc---cchHhHhhee--------ee
Q psy11730 317 FQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSV---ANYNKLLTVW--------CL 385 (496)
Q Consensus 317 giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~---~~~~~~~~~~--------~l 385 (496)
|||.|+ |++.|++....+ +...+|++++++++++.. .++||+|+|..+-+.+ ..++.++..+ .+
T Consensus 111 ave~s~-~~~~a~~~~~~n--~~~~~i~~i~~~~~~~~l--pe~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~ 185 (376)
T 4hc4_A 111 AVEASA-IWQQAREVVRFN--GLEDRVHVLPGPVETVEL--PEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLL 185 (376)
T ss_dssp EEECST-THHHHHHHHHHT--TCTTTEEEEESCTTTCCC--SSCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEE
T ss_pred EEeChH-HHHHHHHHHHHc--CCCceEEEEeeeeeeecC--CccccEEEeecccccccccchhhhHHHHHHhhCCCCceE
Confidence 999996 777776544332 345789999999999876 5789999996554433 4555555431 45
Q ss_pred cCCCCCcccEEEeeccCCcccccccchhhHh---cCCC
Q psy11730 386 FPTHTPKDLLKVTSAEGGKQRDEAITWFSII---YPRT 420 (496)
Q Consensus 386 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 420 (496)
+|... .+++..... ......+.+|.++ |+..
T Consensus 186 iP~~a---tly~apie~-~~l~~~i~~w~~v~~~yGfd 219 (376)
T 4hc4_A 186 LPASA---ELFIVPISD-QMLEWRLGFWSQVKQHYGVD 219 (376)
T ss_dssp ESCEE---EEEEEEECC-HHHHHHHHGGGGHHHHHSCC
T ss_pred CCccc---eEEEEEecc-chhhhhhcchhccccccCcC
Confidence 55543 456655543 2222345556554 6654
No 14
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.40 E-value=5.5e-13 Score=129.36 Aligned_cols=101 Identities=13% Similarity=0.167 Sum_probs=82.8
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.++++|.+..+ .+.+|||||||+|.++..|+..+ .+|+|+|+|+.|++.|++ ..++.+.++++++++..
T Consensus 28 ~l~~~l~~~~~-~~~~vLDvGcGtG~~~~~l~~~~-~~v~gvD~s~~ml~~a~~---------~~~v~~~~~~~e~~~~~ 96 (257)
T 4hg2_A 28 ALFRWLGEVAP-ARGDALDCGCGSGQASLGLAEFF-ERVHAVDPGEAQIRQALR---------HPRVTYAVAPAEDTGLP 96 (257)
T ss_dssp HHHHHHHHHSS-CSSEEEEESCTTTTTHHHHHTTC-SEEEEEESCHHHHHTCCC---------CTTEEEEECCTTCCCCC
T ss_pred HHHHHHHHhcC-CCCCEEEEcCCCCHHHHHHHHhC-CEEEEEeCcHHhhhhhhh---------cCCceeehhhhhhhccc
Confidence 46677766543 45699999999999999998876 589999999999998764 35799999999998765
Q ss_pred CCCceeEEEEccccccccchHhHhhe--eeecCCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
+++||+|++..++|++ +++.++++ .+|.|+|.
T Consensus 97 -~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~ 130 (257)
T 4hg2_A 97 -PASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAV 130 (257)
T ss_dssp -SSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEE
T ss_pred -CCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCE
Confidence 7899999999999887 46677766 37788763
No 15
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.34 E-value=1.4e-12 Score=126.71 Aligned_cols=112 Identities=15% Similarity=0.163 Sum_probs=86.0
Q ss_pred chHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccC---CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 274 CTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGA---AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~---~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
....++..|......++.+|||||||+|.+++.+++... .+|+|||+|+.|++.|+++.... +...+++|+++|+
T Consensus 55 ~~~~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~--~~~~~v~~~~~D~ 132 (261)
T 4gek_A 55 NIISMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAY--KAPTPVDVIEGDI 132 (261)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTS--CCSSCEEEEESCT
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhh--ccCceEEEeeccc
Confidence 344455555554445788999999999999999998643 48999999999999998775332 2456899999999
Q ss_pred CCccccCCCceeEEEEccccccccch--HhHhhee--eecCCCC
Q psy11730 351 GSLSAVIHSKFDIILTSETIYSVANY--NKLLTVW--CLFPTHT 390 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~~~~~~--~~~~~~~--~l~p~~~ 390 (496)
.+++. +.||+|+++.+++|+++. ..+++++ .|.|+|.
T Consensus 133 ~~~~~---~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~ 173 (261)
T 4gek_A 133 RDIAI---ENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGA 173 (261)
T ss_dssp TTCCC---CSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred ccccc---cccccceeeeeeeecCchhHhHHHHHHHHHcCCCcE
Confidence 98764 569999999999999654 3566653 6777763
No 16
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.32 E-value=2.2e-12 Score=118.73 Aligned_cols=109 Identities=24% Similarity=0.315 Sum_probs=85.2
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV- 356 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~- 356 (496)
+.+.+......++.+|||+|||+|.+++.++..+..+|+|+|+|+.|++.++++....+ ..+++++++|+.++...
T Consensus 33 l~~~l~~~~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~ 109 (189)
T 3p9n_A 33 LFNIVTARRDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALG---LSGATLRRGAVAAVVAAG 109 (189)
T ss_dssp HHHHHHHHSCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHT---CSCEEEEESCHHHHHHHC
T ss_pred HHHHHHhccCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcC---CCceEEEEccHHHHHhhc
Confidence 44555444446789999999999999998888888899999999999999987754433 36899999999887542
Q ss_pred CCCceeEEEEccccccc-cchHhHhhee----eecCCC
Q psy11730 357 IHSKFDIILTSETIYSV-ANYNKLLTVW----CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~-~~~~~~~~~~----~l~p~~ 389 (496)
..++||+|++++++++. ++.+.+++.. .|.|++
T Consensus 110 ~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG 147 (189)
T 3p9n_A 110 TTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGT 147 (189)
T ss_dssp CSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTC
T ss_pred cCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCe
Confidence 25789999999998875 6677776652 456655
No 17
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.30 E-value=4.7e-12 Score=121.84 Aligned_cols=109 Identities=14% Similarity=0.125 Sum_probs=87.9
Q ss_pred HHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..++.+.....+ ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++....+ ...++++..+|+.+++.
T Consensus 23 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~ 100 (256)
T 1nkv_A 23 EKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELG--VSERVHFIHNDAAGYVA 100 (256)
T ss_dssp HHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCCTTCCC
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECChHhCCc
Confidence 444555554443 578999999999999999998766789999999999999987653322 23589999999998765
Q ss_pred cCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++||+|++..+++|++++..+++++ .|.|+|
T Consensus 101 --~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG 134 (256)
T 1nkv_A 101 --NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGG 134 (256)
T ss_dssp --SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEE
T ss_pred --CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCe
Confidence 68999999999999999999888773 667765
No 18
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.29 E-value=2.2e-12 Score=120.54 Aligned_cols=112 Identities=13% Similarity=0.076 Sum_probs=82.4
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccc---------cCCCCceEEEe
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMN---------TDNLEKCKFYH 347 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~---------~~~~~~v~~~~ 347 (496)
.+.+++......++.+|||+|||+|..+..|++.|. +|+|+|+|+.|++.|++++.... .....++++++
T Consensus 10 ~l~~~~~~l~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 88 (203)
T 1pjz_A 10 DLQQYWSSLNVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWC 88 (203)
T ss_dssp HHHHHHHHHCCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEE
T ss_pred HHHHHHHhcccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEE
Confidence 355555543334678999999999999999999875 89999999999999987642100 00135899999
Q ss_pred cccCCccccCCCceeEEEEccccccccc--hHhHhhe--eeecCCC
Q psy11730 348 GDWGSLSAVIHSKFDIILTSETIYSVAN--YNKLLTV--WCLFPTH 389 (496)
Q Consensus 348 ~d~~~~~~~~~~~fD~Ii~~~~l~~~~~--~~~~~~~--~~l~p~~ 389 (496)
+|+.+++....++||+|++..++++++. ...++++ ..|.|++
T Consensus 89 ~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG 134 (203)
T 1pjz_A 89 GDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQAC 134 (203)
T ss_dssp ECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEE
T ss_pred CccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCc
Confidence 9999987531268999999999998854 3345554 2566665
No 19
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.28 E-value=1.3e-11 Score=119.91 Aligned_cols=112 Identities=16% Similarity=0.224 Sum_probs=87.7
Q ss_pred hHHHHHHHHhCCC--CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC
Q psy11730 275 TFDLLNFIKDNVA--VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352 (496)
Q Consensus 275 ~~~l~~~l~~~~~--~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~ 352 (496)
.......+..... .++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.++++....+ ...+++++.+|+.+
T Consensus 30 ~~~~~~~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~ 107 (267)
T 3kkz_A 30 SPEVTLKALSFIDNLTEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSG--LQNRVTGIVGSMDD 107 (267)
T ss_dssp CHHHHHHHHTTCCCCCTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTS
T ss_pred CHHHHHHHHHhcccCCCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcC--CCcCcEEEEcChhh
Confidence 3334444444443 3578999999999999999999876799999999999999987754332 34579999999998
Q ss_pred ccccCCCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 353 LSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 353 ~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
++.. .++||+|++..+++|+ ++..+++.+ .|.|+|.
T Consensus 108 ~~~~-~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~ 145 (267)
T 3kkz_A 108 LPFR-NEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGY 145 (267)
T ss_dssp CCCC-TTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEE
T ss_pred CCCC-CCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCE
Confidence 7754 6899999999999999 788887763 6667653
No 20
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.28 E-value=6.4e-12 Score=123.45 Aligned_cols=119 Identities=21% Similarity=0.309 Sum_probs=89.5
Q ss_pred ceeeecchHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeC-CHHHHHHhcCccccc--ccCCC---
Q psy11730 268 GYKIWECTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDY-NQEVIESLTLPNILM--NTDNL--- 340 (496)
Q Consensus 268 ~~~~~~~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~-s~~~i~~a~~~~~~~--~~~~~--- 340 (496)
|..+|+++..|++++..... .++++|||||||+|.+++.+++.+..+|+|+|+ |+.|++.++++...+ .....
T Consensus 57 g~~~~~~~~~l~~~l~~~~~~~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~ 136 (281)
T 3bzb_A 57 TSHVWSGARALADTLCWQPELIAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETV 136 (281)
T ss_dssp -----CHHHHHHHHHHHCGGGTTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC--------
T ss_pred CceeecHHHHHHHHHHhcchhcCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccC
Confidence 55679999999999998764 568899999999999999999988779999999 899999988765221 00111
Q ss_pred --CceEEEecccCCccc-c----CCCceeEEEEccccccccchHhHhhee--eec
Q psy11730 341 --EKCKFYHGDWGSLSA-V----IHSKFDIILTSETIYSVANYNKLLTVW--CLF 386 (496)
Q Consensus 341 --~~v~~~~~d~~~~~~-~----~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~ 386 (496)
.++++...++.+... . ..++||+|++.+++++.++...+++.. .|.
T Consensus 137 ~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk 191 (281)
T 3bzb_A 137 KRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLA 191 (281)
T ss_dssp --CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBC
T ss_pred CCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhc
Confidence 478888887765321 1 257899999999999999999888763 455
No 21
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.28 E-value=7.8e-12 Score=120.70 Aligned_cols=113 Identities=23% Similarity=0.232 Sum_probs=91.4
Q ss_pred ecchHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
.+....+++.+.+...+ ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++... ..+++++.+|+
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~ 111 (266)
T 3ujc_A 37 SSGGLEATKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSG-----NNKIIFEANDI 111 (266)
T ss_dssp STTHHHHHHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCS-----CTTEEEEECCT
T ss_pred ccchHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhc-----CCCeEEEECcc
Confidence 34455566666666654 4779999999999999999987667999999999999998876532 16899999999
Q ss_pred CCccccCCCceeEEEEccccccc--cchHhHhhee--eecCCCC
Q psy11730 351 GSLSAVIHSKFDIILTSETIYSV--ANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~~~--~~~~~~~~~~--~l~p~~~ 390 (496)
.+++.. +++||+|++..+++|+ .++..+++.. .|.|+|.
T Consensus 112 ~~~~~~-~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~ 154 (266)
T 3ujc_A 112 LTKEFP-ENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGT 154 (266)
T ss_dssp TTCCCC-TTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEE
T ss_pred ccCCCC-CCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCE
Confidence 987654 6899999999999999 8888888763 6677653
No 22
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=99.28 E-value=6.8e-12 Score=124.34 Aligned_cols=56 Identities=27% Similarity=0.395 Sum_probs=50.7
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhhHHHHhhcCCc
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKTIRGRP 483 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~~~~~~~~~~~ 483 (496)
+.+++.++|.+||++|||+||+|||.|+..||+|+.||+|+.|+...++.|-.-|-
T Consensus 289 gv~~~~~~Q~~GeavfiPaG~~HQV~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 289 GVRTCTLIQFLGDAIVLPAGALHQVQNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp CCCCEEEEEETTCEEEECTTCEEEEEESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred CCeeEEEEEcCCCEEEecCCCHHHHhcccchhhHhhhhcChhhHHHHHHHHHHHhh
Confidence 45789999999999999999999999999999999999999999999988766653
No 23
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.27 E-value=6.2e-12 Score=121.54 Aligned_cols=98 Identities=14% Similarity=0.099 Sum_probs=81.5
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++.... ...++.+..+|+++++.. +++||+|++.
T Consensus 36 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~---~~~~v~~~~~d~~~l~~~-~~~fD~V~~~ 110 (260)
T 1vl5_A 36 KGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGN---GHQQVEYVQGDAEQMPFT-DERFHIVTCR 110 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCC-CCCSC-TTCEEEEEEE
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhc---CCCceEEEEecHHhCCCC-CCCEEEEEEh
Confidence 3678999999999999999888875 9999999999999988765332 235799999999987754 6899999999
Q ss_pred cccccccchHhHhhee--eecCCCC
Q psy11730 368 ETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 368 ~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
.+++|++++..++++. .|.|+|.
T Consensus 111 ~~l~~~~d~~~~l~~~~r~LkpgG~ 135 (260)
T 1vl5_A 111 IAAHHFPNPASFVSEAYRVLKKGGQ 135 (260)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred hhhHhcCCHHHHHHHHHHHcCCCCE
Confidence 9999999999988873 6777653
No 24
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.27 E-value=9.1e-12 Score=121.13 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=90.2
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+++.+.+...+ ++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++....+ ...++.+..+|+.++
T Consensus 46 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 46 TDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAG--LANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEECccccC
Confidence 34556666666554 578999999999999999998767899999999999999887653322 345799999999987
Q ss_pred cccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 354 SAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+.. +++||+|++..+++|+++...+++.. .|.|+|
T Consensus 124 ~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 160 (273)
T 3bus_A 124 PFE-DASFDAVWALESLHHMPDRGRALREMARVLRPGG 160 (273)
T ss_dssp CSC-TTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEE
T ss_pred CCC-CCCccEEEEechhhhCCCHHHHHHHHHHHcCCCe
Confidence 654 57999999999999999999988763 666665
No 25
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.27 E-value=1e-11 Score=119.45 Aligned_cols=102 Identities=17% Similarity=0.284 Sum_probs=85.5
Q ss_pred HHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCC
Q psy11730 281 FIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHS 359 (496)
Q Consensus 281 ~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 359 (496)
.+..... .++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++.. ..++.++.+|+.+++.. ++
T Consensus 35 ~l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~-~~ 107 (253)
T 3g5l_A 35 ELKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT------SPVVCYEQKAIEDIAIE-PD 107 (253)
T ss_dssp HHHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC------CTTEEEEECCGGGCCCC-TT
T ss_pred HHHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc------cCCeEEEEcchhhCCCC-CC
Confidence 3444443 4688999999999999999999988899999999999999887652 46899999999887653 68
Q ss_pred ceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 360 KFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 360 ~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+||+|++..+++|++++..+++.. .|.|+|
T Consensus 108 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG 139 (253)
T 3g5l_A 108 AYNVVLSSLALHYIASFDDICKKVYINLKSSG 139 (253)
T ss_dssp CEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred CeEEEEEchhhhhhhhHHHHHHHHHHHcCCCc
Confidence 999999999999999999988763 566665
No 26
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.26 E-value=1.7e-11 Score=117.99 Aligned_cols=113 Identities=18% Similarity=0.287 Sum_probs=88.3
Q ss_pred chHHHHHHHHhCC-CC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 274 CTFDLLNFIKDNV-AV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 274 ~~~~l~~~l~~~~-~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
....+...+.... .+ ++.+|||||||+|.++..+++.++.+|+|+|+|+.+++.++++....+ ...+++++.+|+.
T Consensus 29 ~~~~~~~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~ 106 (257)
T 3f4k_A 29 GSPEATRKAVSFINELTDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKAN--CADRVKGITGSMD 106 (257)
T ss_dssp CCHHHHHHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTT
T ss_pred CCHHHHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChh
Confidence 3344455555544 33 467999999999999999999887899999999999999887654332 3346999999998
Q ss_pred CccccCCCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
+++.. +++||+|++..+++|+ ++..+++.+ .|.|+|.
T Consensus 107 ~~~~~-~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~ 145 (257)
T 3f4k_A 107 NLPFQ-NEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGF 145 (257)
T ss_dssp SCSSC-TTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEE
T ss_pred hCCCC-CCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcE
Confidence 87754 6899999999999999 778887763 6667653
No 27
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.26 E-value=5e-12 Score=118.14 Aligned_cols=110 Identities=13% Similarity=0.158 Sum_probs=88.3
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+++.+.+....++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++....+ ...+++++.+|+.+++..
T Consensus 31 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~ 108 (219)
T 3dlc_A 31 IIAENIINRFGITAGTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADAN--LNDRIQIVQGDVHNIPIE 108 (219)
T ss_dssp HHHHHHHHHHCCCEEEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhcc--ccCceEEEEcCHHHCCCC
Confidence 345555555555555999999999999999998855789999999999999987754322 345899999999987753
Q ss_pred CCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++||+|++..+++|++++..+++.. .|.|++
T Consensus 109 -~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 142 (219)
T 3dlc_A 109 -DNYADLIVSRGSVFFWEDVATAFREIYRILKSGG 142 (219)
T ss_dssp -TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred -cccccEEEECchHhhccCHHHHHHHHHHhCCCCC
Confidence 68999999999999999999988773 566665
No 28
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.26 E-value=1.1e-11 Score=122.44 Aligned_cols=112 Identities=18% Similarity=0.214 Sum_probs=89.3
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
.+.+.|......++.+|||||||+|.++..+++. ...+|+|+|+|+.|++.|+++.... .+...+++|+++|+++++
T Consensus 24 ~~~~~l~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~v~~~~~d~~~~~ 102 (299)
T 3g5t_A 24 DFYKMIDEYHDGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGS-PDTYKNVSFKISSSDDFK 102 (299)
T ss_dssp HHHHHHHHHCCSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHC-C-CCTTEEEEECCTTCCG
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhc-cCCCCceEEEEcCHHhCC
Confidence 4556666655557889999999999999999973 5689999999999999998765332 123578999999999887
Q ss_pred ccC-----CCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 355 AVI-----HSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 355 ~~~-----~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
... .++||+|++..+++|+ ++..+++.. .|.|+|.
T Consensus 103 ~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~ 144 (299)
T 3g5t_A 103 FLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGT 144 (299)
T ss_dssp GGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEE
T ss_pred ccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcE
Confidence 542 2799999999999999 999988773 6777653
No 29
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.24 E-value=1e-11 Score=120.38 Aligned_cols=122 Identities=11% Similarity=0.117 Sum_probs=90.4
Q ss_pred cccceeecccccCCCccccCceeeecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHH
Q psy11730 248 EYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIES 327 (496)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~ 327 (496)
+.+..+.+....+...+...+|++..++..|+.++.- .+++.+|||+|||+|.+++.+++.+..+|+|+|+++.+++.
T Consensus 10 ~~e~~d~~~~~~~~i~q~~~~~~~~~d~~ll~~~~~~--~~~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~ 87 (259)
T 3lpm_A 10 GDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYL--PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADM 87 (259)
T ss_dssp TTCEEEEETTTTEEEEEBTTTBCCCHHHHHHHHHCCC--CSSCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHH
T ss_pred CCCeeccccCCCEEEEeCCCCccCcHHHHHHHHHhcC--CCCCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHH
Confidence 3455555555555555556677777777767666521 12578999999999999999999887899999999999999
Q ss_pred hcCcccccccCCCCceEEEecccCCccccC-CCceeEEEEccccccc
Q psy11730 328 LTLPNILMNTDNLEKCKFYHGDWGSLSAVI-HSKFDIILTSETIYSV 373 (496)
Q Consensus 328 a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~fD~Ii~~~~l~~~ 373 (496)
|+++....+ ...+++++++|+.++.... .++||+|+++++++..
T Consensus 88 a~~n~~~~~--~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~ 132 (259)
T 3lpm_A 88 AKRSVAYNQ--LEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFAT 132 (259)
T ss_dssp HHHHHHHTT--CTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC---
T ss_pred HHHHHHHCC--CcccEEEEECcHHHhhhhhccCCccEEEECCCCCCC
Confidence 987754332 3357999999999876422 5799999999998765
No 30
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.24 E-value=1.9e-11 Score=116.47 Aligned_cols=104 Identities=21% Similarity=0.265 Sum_probs=86.3
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+++++..... ++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++. ...+++++.+|+.+++..
T Consensus 42 ~~~~~l~~~~~-~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~~ 113 (242)
T 3l8d_A 42 TIIPFFEQYVK-KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERG------EGPDLSFIKGDLSSLPFE 113 (242)
T ss_dssp THHHHHHHHSC-TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTT------CBTTEEEEECBTTBCSSC
T ss_pred HHHHHHHHHcC-CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhc------ccCCceEEEcchhcCCCC
Confidence 45566655543 678999999999999999998854 8999999999999998764 346899999999987654
Q ss_pred CCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++||+|++..+++|++++..+++.. .|.|++
T Consensus 114 -~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 147 (242)
T 3l8d_A 114 -NEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDG 147 (242)
T ss_dssp -TTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEE
T ss_pred -CCCccEEEEcChHhhccCHHHHHHHHHHHhCCCe
Confidence 68999999999999999999888763 666665
No 31
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.24 E-value=5.3e-12 Score=127.98 Aligned_cols=166 Identities=22% Similarity=0.231 Sum_probs=105.3
Q ss_pred ccCCccccceeecccccCCCccccCceeeecchHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCC
Q psy11730 243 RTPLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYN 321 (496)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s 321 (496)
...+|+.+....+++.|+.+..+.. ...+.|.... ..++++|||||||+|.+++.+++.+..+|+|+|+|
T Consensus 28 ~~~yf~~y~~~~~~~~~l~d~~r~~---------~~~~~i~~~~~~~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s 98 (349)
T 3q7e_A 28 KDYYFDSYAHFGIHEELLKDEVRTL---------TYRNSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECS 98 (349)
T ss_dssp ---------CCHHHHHHHHCHHHHH---------HHHHHHHTCHHHHTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECS
T ss_pred HHHHHHhhhhhHHHHHHhccHHHHH---------HHHHHHHhccccCCCCEEEEEeccchHHHHHHHHCCCCEEEEECcH
Confidence 3456777766777777777654322 2223333322 24688999999999999999999988899999999
Q ss_pred HHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccccc---cchHhHhhee--eecCCCCC---cc
Q psy11730 322 QEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSV---ANYNKLLTVW--CLFPTHTP---KD 393 (496)
Q Consensus 322 ~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~---~~~~~~~~~~--~l~p~~~~---~~ 393 (496)
+|++.|+++....+ ...+++++.+|+++++.. .++||+|+++.+.+++ .+++.++... .|.|+|.. ..
T Consensus 99 -~~l~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~-~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 99 -SISDYAVKIVKANK--LDHVVTIIKGKVEEVELP-VEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp -THHHHHHHHHHHTT--CTTTEEEEESCTTTCCCS-SSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred -HHHHHHHHHHHHcC--CCCcEEEEECcHHHccCC-CCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 59998887654332 344699999999998654 5899999998775554 6777776542 44554421 11
Q ss_pred cEEEeeccCCcccccccchhhHhcCCCC
Q psy11730 394 LLKVTSAEGGKQRDEAITWFSIIYPRTQ 421 (496)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (496)
..++............+.+|.+.|+...
T Consensus 175 ~~~~~~~~~~~~~~~~~~~w~~~~G~d~ 202 (349)
T 3q7e_A 175 TLYVTAIEDRQYKDYKIHWWENVYGFDM 202 (349)
T ss_dssp EEEEEEECCHHHHHHHTGGGGCBTTBCC
T ss_pred eEEEeeecChhhhhhhhcccccccCcch
Confidence 2333333333334456778887777654
No 32
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.23 E-value=1.4e-11 Score=120.73 Aligned_cols=102 Identities=22% Similarity=0.286 Sum_probs=84.1
Q ss_pred CCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 286 VAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 286 ~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
...++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++....+ ...+++++.+|+.+++...+++||+|+
T Consensus 65 ~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~ 141 (285)
T 4htf_A 65 MGPQKLRVLDAGGGEGQTAIKMAERG-HQVILCDLSAQMIDRAKQAAEAKG--VSDNMQFIHCAAQDVASHLETPVDLIL 141 (285)
T ss_dssp TCSSCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHC-C--CGGGEEEEESCGGGTGGGCSSCEEEEE
T ss_pred cCCCCCEEEEeCCcchHHHHHHHHCC-CEEEEEECCHHHHHHHHHHHHhcC--CCcceEEEEcCHHHhhhhcCCCceEEE
Confidence 34457899999999999999999885 589999999999999987653321 236899999999988744478999999
Q ss_pred EccccccccchHhHhhee--eecCCCC
Q psy11730 366 TSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
+..+++|++++..++++. .|.|+|.
T Consensus 142 ~~~~l~~~~~~~~~l~~~~~~LkpgG~ 168 (285)
T 4htf_A 142 FHAVLEWVADPRSVLQTLWSVLRPGGV 168 (285)
T ss_dssp EESCGGGCSCHHHHHHHHHHTEEEEEE
T ss_pred ECchhhcccCHHHHHHHHHHHcCCCeE
Confidence 999999999999988873 6677653
No 33
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.23 E-value=2.5e-11 Score=120.10 Aligned_cols=108 Identities=11% Similarity=0.111 Sum_probs=84.7
Q ss_pred HHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..++.+.....+ ++.+|||||||+|.++..+++..+.+|+|+|+|+.|++.++++....+ ...++++..+|+.++
T Consensus 59 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~-- 134 (302)
T 3hem_A 59 AKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVD--SPRRKEVRIQGWEEF-- 134 (302)
T ss_dssp HHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSC--CSSCEEEEECCGGGC--
T ss_pred HHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECCHHHc--
Confidence 345555555544 477999999999999999998844889999999999999988754322 344899999999876
Q ss_pred cCCCceeEEEEccccccccch---------HhHhhee--eecCCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANY---------NKLLTVW--CLFPTHT 390 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~---------~~~~~~~--~l~p~~~ 390 (496)
+++||+|++..+++|++++ ..+++.. .|.|+|.
T Consensus 135 --~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~ 178 (302)
T 3hem_A 135 --DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGR 178 (302)
T ss_dssp --CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCE
T ss_pred --CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcE
Confidence 6899999999999999665 5666652 6666653
No 34
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.22 E-value=8.3e-12 Score=126.05 Aligned_cols=135 Identities=20% Similarity=0.209 Sum_probs=92.7
Q ss_pred cccCCccccceeecccccCCCccccCceeeecchHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeC
Q psy11730 242 LRTPLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDY 320 (496)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~ 320 (496)
.+..+|..+.....+..|+.+..+. ....+.|.+... .++++|||||||+|.+++.+++.|..+|+|+|+
T Consensus 25 ~d~~Y~~~y~~~~~~~~ml~d~~r~---------~~~~~~i~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~ 95 (340)
T 2fyt_A 25 EDGVYFSSYGHYGIHEEMLKDKIRT---------ESYRDFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQ 95 (340)
T ss_dssp -----CCGGGSHHHHHHHHTCHHHH---------HHHHHHHHHCGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEES
T ss_pred chhhHHHhhcchhHHHHHhcCHHHH---------HHHHHHHHhhhhhcCCCEEEEeeccCcHHHHHHHHcCCCEEEEECh
Confidence 3445777766666667777664332 222344544433 468899999999999999999998789999999
Q ss_pred CHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccc---cccccchHhHhhe--eeecCCC
Q psy11730 321 NQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSET---IYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 321 s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~---l~~~~~~~~~~~~--~~l~p~~ 389 (496)
|+ |++.|+++....+ ...+++++.+|+++++.. .++||+|+++.+ +.+..+++.++.. ..|.|+|
T Consensus 96 s~-~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~-~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG 165 (340)
T 2fyt_A 96 SE-ILYQAMDIIRLNK--LEDTITLIKGKIEEVHLP-VEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGG 165 (340)
T ss_dssp ST-HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCS-CSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEE
T ss_pred HH-HHHHHHHHHHHcC--CCCcEEEEEeeHHHhcCC-CCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCc
Confidence 96 9988876643322 236899999999987653 478999999874 4445666666654 2455554
No 35
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.22 E-value=1.6e-11 Score=117.41 Aligned_cols=110 Identities=20% Similarity=0.143 Sum_probs=87.3
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
|+....+++.+. ..++.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++....+ ..++.+..+|++
T Consensus 7 ~~~~~~~~~~~~---~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~ 79 (239)
T 1xxl_A 7 HHSLGLMIKTAE---CRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKG---VENVRFQQGTAE 79 (239)
T ss_dssp HHHHHHHHHHHT---CCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHT---CCSEEEEECBTT
T ss_pred CCCcchHHHHhC---cCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcC---CCCeEEEecccc
Confidence 444444555543 23678999999999999999888774 89999999999999887653322 357999999999
Q ss_pred CccccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++.. +++||+|++..+++|++++..++++. .|.|+|
T Consensus 80 ~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG 118 (239)
T 1xxl_A 80 SLPFP-DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDG 118 (239)
T ss_dssp BCCSC-TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred cCCCC-CCcEEEEEECCchhhccCHHHHHHHHHHHcCCCc
Confidence 87653 58999999999999999999988763 667765
No 36
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.21 E-value=3.8e-11 Score=117.74 Aligned_cols=110 Identities=14% Similarity=0.230 Sum_probs=85.8
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+++.+.+...+ ++.+|||||||+|.++..+++....+|+|+|+|+.+++.++++.... +...++++..+|+.++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~--~~~~~~~~~~~d~~~~ 126 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANS--ENLRSKRVLLAGWEQF 126 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTC--CCCSCEEEEESCGGGC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc--CCCCCeEEEECChhhC
Confidence 33455666666554 47799999999999999998554569999999999999988765322 2345899999999765
Q ss_pred cccCCCceeEEEEccccccc--cchHhHhhee--eecCCCC
Q psy11730 354 SAVIHSKFDIILTSETIYSV--ANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~--~~~~~~~~~~--~l~p~~~ 390 (496)
+ ++||+|++..+++|+ .++..++++. .|.|+|.
T Consensus 127 ~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 163 (287)
T 1kpg_A 127 D----EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGV 163 (287)
T ss_dssp C----CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCE
T ss_pred C----CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCE
Confidence 4 789999999999999 6788888763 6667653
No 37
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.21 E-value=1.9e-11 Score=120.44 Aligned_cols=111 Identities=11% Similarity=0.129 Sum_probs=87.7
Q ss_pred HHHHHHHhCC----CC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 277 DLLNFIKDNV----AV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 277 ~l~~~l~~~~----~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
.+++.+.... .+ ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++....+ ...++++..+|+.
T Consensus 65 ~~~~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~ 142 (297)
T 2o57_A 65 RTDEWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAG--LADNITVKYGSFL 142 (297)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHT--CTTTEEEEECCTT
T ss_pred HHHHHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcC--CCcceEEEEcCcc
Confidence 3444444443 43 578999999999999999998755689999999999999887653322 3467999999999
Q ss_pred CccccCCCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
+++.. +++||+|++..+++|++++..++++. .|.|+|.
T Consensus 143 ~~~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~ 182 (297)
T 2o57_A 143 EIPCE-DNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGV 182 (297)
T ss_dssp SCSSC-TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEE
T ss_pred cCCCC-CCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeE
Confidence 87754 67999999999999999998888773 6777653
No 38
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.21 E-value=2.4e-11 Score=111.13 Aligned_cols=89 Identities=11% Similarity=0.069 Sum_probs=69.9
Q ss_pred HHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 276 FDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 276 ~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..++..+......++.+|||||||+|.++..+++. ..+|+|+|+|+.|++.|+++....+ ..+++++..+.+.+..
T Consensus 9 ~~~~~~~l~~~~~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~~~~~l~~ 84 (185)
T 3mti_A 9 IHMSHDFLAEVLDDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLG---IENTELILDGHENLDH 84 (185)
T ss_dssp HHHHHHHHHTTCCTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHT---CCCEEEEESCGGGGGG
T ss_pred HHHHHHHHHHhCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCcHHHHHh
Confidence 34444444444446889999999999999999988 6789999999999999988764432 3689999988887654
Q ss_pred cCCCceeEEEEcc
Q psy11730 356 VIHSKFDIILTSE 368 (496)
Q Consensus 356 ~~~~~fD~Ii~~~ 368 (496)
..+++||+|+++.
T Consensus 85 ~~~~~fD~v~~~~ 97 (185)
T 3mti_A 85 YVREPIRAAIFNL 97 (185)
T ss_dssp TCCSCEEEEEEEE
T ss_pred hccCCcCEEEEeC
Confidence 4467899999874
No 39
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.20 E-value=2.3e-11 Score=117.52 Aligned_cols=113 Identities=14% Similarity=0.091 Sum_probs=82.5
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccc---------ccc-----CCCC
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNIL---------MNT-----DNLE 341 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~---------~~~-----~~~~ 341 (496)
.+.+++..... .++.+|||+|||+|..+..|++.|. +|+|||+|+.|++.|++++.. .+. ....
T Consensus 55 ~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (252)
T 2gb4_A 55 LLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSG 133 (252)
T ss_dssp HHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTS
T ss_pred HHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCC
Confidence 34455543222 3678999999999999999999876 899999999999998755421 000 1236
Q ss_pred ceEEEecccCCccccCCCceeEEEEccccccccc--hHhHhhe--eeecCCCC
Q psy11730 342 KCKFYHGDWGSLSAVIHSKFDIILTSETIYSVAN--YNKLLTV--WCLFPTHT 390 (496)
Q Consensus 342 ~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~~--~~~~~~~--~~l~p~~~ 390 (496)
+++|+++|+.+++....++||+|++..++++++. ...+++. ..|.|+|.
T Consensus 134 ~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~ 186 (252)
T 2gb4_A 134 SISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQ 186 (252)
T ss_dssp SEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEE
T ss_pred ceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeE
Confidence 8999999999987643379999999999998854 3345554 25667653
No 40
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.20 E-value=4e-11 Score=116.19 Aligned_cols=99 Identities=13% Similarity=0.169 Sum_probs=82.0
Q ss_pred HHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+++.+.+.... ++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++.+. +++|+.+|+++++.
T Consensus 21 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~---------~~~~~~~d~~~~~~ 90 (261)
T 3ege_A 21 RIVNAIINLLNLPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP---------QVEWFTGYAENLAL 90 (261)
T ss_dssp HHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT---------TEEEECCCTTSCCS
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc---------CCEEEECchhhCCC
Confidence 455556555543 57899999999999999998854 68999999999999877542 89999999998775
Q ss_pred cCCCceeEEEEccccccccchHhHhhee--eec
Q psy11730 356 VIHSKFDIILTSETIYSVANYNKLLTVW--CLF 386 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~ 386 (496)
. +++||+|++..+++|++++..++++. .|.
T Consensus 91 ~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk 122 (261)
T 3ege_A 91 P-DKSVDGVISILAIHHFSHLEKSFQEMQRIIR 122 (261)
T ss_dssp C-TTCBSEEEEESCGGGCSSHHHHHHHHHHHBC
T ss_pred C-CCCEeEEEEcchHhhccCHHHHHHHHHHHhC
Confidence 4 68999999999999999999998873 455
No 41
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.18 E-value=3.9e-11 Score=116.91 Aligned_cols=110 Identities=21% Similarity=0.253 Sum_probs=89.3
Q ss_pred HHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 276 FDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 276 ~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
..+.+.+.....+ ++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.++++.... ...++++..+|+.++
T Consensus 23 ~~l~~~l~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~~~d~~~~ 99 (276)
T 3mgg_A 23 ETLEKLLHHDTVYPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKN---GIKNVKFLQANIFSL 99 (276)
T ss_dssp CHHHHHHHTTCCCCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEECCGGGC
T ss_pred HHHHHHHhhcccCCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCcEEEEcccccC
Confidence 3455666655543 578999999999999999998874 79999999999999988765332 245799999999987
Q ss_pred cccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 354 SAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+.. +++||+|++..+++|+++++.+++.. .|.|++
T Consensus 100 ~~~-~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 136 (276)
T 3mgg_A 100 PFE-DSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGG 136 (276)
T ss_dssp CSC-TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred CCC-CCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCc
Confidence 754 68999999999999999999888763 666765
No 42
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.18 E-value=5.5e-11 Score=111.63 Aligned_cols=101 Identities=17% Similarity=0.154 Sum_probs=78.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccC--CCCceEEEecccCCccccCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTD--NLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.++++....+.. ...+++++.+|+...+.. .++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~v 106 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKR-FHGYDAA 106 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGG-GCSCSEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCccccccc-CCCcCEE
Confidence 3578999999999999999999876 79999999999999998765322210 012799999998765543 4789999
Q ss_pred EEccccccccch--HhHhhee--eecCCC
Q psy11730 365 LTSETIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
++..+++|+++. ..+++.. .|.|++
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 135 (217)
T 3jwh_A 107 TVIEVIEHLDLSRLGAFERVLFEFAQPKI 135 (217)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCSE
T ss_pred eeHHHHHcCCHHHHHHHHHHHHHHcCCCE
Confidence 999999999755 6777652 555543
No 43
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.18 E-value=2.7e-11 Score=113.61 Aligned_cols=98 Identities=19% Similarity=0.195 Sum_probs=82.1
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-C-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-A-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||||||+|.++..+++.+ + .+|+|+|+|+.+++.++++....+ ..++++..+|+.+++.. +++||+|+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~-~~~fD~v~ 111 (219)
T 3dh0_A 36 KEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLG---LKNVEVLKSEENKIPLP-DNTVDFIF 111 (219)
T ss_dssp CTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECBTTBCSSC-SSCEEEEE
T ss_pred CCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEecccccCCCC-CCCeeEEE
Confidence 357899999999999999999886 3 699999999999999987754432 34799999999887643 57899999
Q ss_pred EccccccccchHhHhhee--eecCCC
Q psy11730 366 TSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+..+++|++++..+++.. .|.|++
T Consensus 112 ~~~~l~~~~~~~~~l~~~~~~LkpgG 137 (219)
T 3dh0_A 112 MAFTFHELSEPLKFLEELKRVAKPFA 137 (219)
T ss_dssp EESCGGGCSSHHHHHHHHHHHEEEEE
T ss_pred eehhhhhcCCHHHHHHHHHHHhCCCe
Confidence 999999999998888763 566665
No 44
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.17 E-value=4.6e-11 Score=113.74 Aligned_cols=95 Identities=21% Similarity=0.321 Sum_probs=80.3
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++.. ..++++..+|+.+++.. .++||+|++.
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~------~~~~~~~~~d~~~~~~~-~~~fD~v~~~ 114 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGP------DTGITYERADLDKLHLP-QDSFDLAYSS 114 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSC------SSSEEEEECCGGGCCCC-TTCEEEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcc------cCCceEEEcChhhccCC-CCCceEEEEe
Confidence 4678999999999999999999877699999999999999887642 23789999999887643 6789999999
Q ss_pred cccccccchHhHhhee--eecCCC
Q psy11730 368 ETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.+++|+++...+++.. .|.|++
T Consensus 115 ~~l~~~~~~~~~l~~~~~~L~pgG 138 (243)
T 3bkw_A 115 LALHYVEDVARLFRTVHQALSPGG 138 (243)
T ss_dssp SCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred ccccccchHHHHHHHHHHhcCcCc
Confidence 9999999998888763 566655
No 45
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.17 E-value=3e-11 Score=113.16 Aligned_cols=105 Identities=15% Similarity=0.193 Sum_probs=82.3
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+...+..... .++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++... ..+++++.+|+.+++.
T Consensus 38 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~ 111 (216)
T 3ofk_A 38 RHTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC-KRLTVIDVMPRAIGRACQRTKR-----WSHISWAATDILQFST 111 (216)
T ss_dssp HHHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE-EEEEEEESCHHHHHHHHHHTTT-----CSSEEEEECCTTTCCC
T ss_pred HHHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHhccc-----CCCeEEEEcchhhCCC
Confidence 44445544433 346799999999999999998887 5899999999999998876532 3489999999998873
Q ss_pred cCCCceeEEEEccccccccchHh---Hhhe--eeecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANYNK---LLTV--WCLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~~---~~~~--~~l~p~~ 389 (496)
.++||+|++..+++|+++++. +++. ..|.|++
T Consensus 112 --~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 148 (216)
T 3ofk_A 112 --AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGG 148 (216)
T ss_dssp --SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEE
T ss_pred --CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCC
Confidence 789999999999999998753 3544 2566655
No 46
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.17 E-value=3.8e-11 Score=115.23 Aligned_cols=96 Identities=18% Similarity=0.191 Sum_probs=79.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++... ..+++++.+|+.+++.. .++||+|++.
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~-~~~fD~v~~~ 165 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAG-----MPVGKFILASMETATLP-PNTYDLIVIQ 165 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTT-----SSEEEEEESCGGGCCCC-SSCEEEEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhcc-----CCceEEEEccHHHCCCC-CCCeEEEEEc
Confidence 45789999999999999999988878899999999999998876422 26799999999887643 5799999999
Q ss_pred cccccc--cchHhHhhee--eecCCC
Q psy11730 368 ETIYSV--ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~--~~~~~~~~~~--~l~p~~ 389 (496)
.+++|+ .+...+++.. .|.|++
T Consensus 166 ~~l~~~~~~~~~~~l~~~~~~LkpgG 191 (254)
T 1xtp_A 166 WTAIYLTDADFVKFFKHCQQALTPNG 191 (254)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCe
Confidence 999999 4577777652 566655
No 47
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.17 E-value=6.1e-11 Score=111.39 Aligned_cols=100 Identities=18% Similarity=0.205 Sum_probs=78.5
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccC--CCCceEEEecccCCccccCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTD--NLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.++++....+.. ...+++++.+|+...+.. .++||+|
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~V 106 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKR-FSGYDAA 106 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGG-GTTCSEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccc-cCCCCEE
Confidence 3678999999999999999998876 79999999999999998765332210 012799999999766543 5789999
Q ss_pred EEccccccccch--HhHhhee--eecCC
Q psy11730 365 LTSETIYSVANY--NKLLTVW--CLFPT 388 (496)
Q Consensus 365 i~~~~l~~~~~~--~~~~~~~--~l~p~ 388 (496)
++..+++|+++. ..+++.. .|.|+
T Consensus 107 ~~~~~l~~~~~~~~~~~l~~~~~~Lkpg 134 (219)
T 3jwg_A 107 TVIEVIEHLDENRLQAFEKVLFEFTRPQ 134 (219)
T ss_dssp EEESCGGGCCHHHHHHHHHHHHTTTCCS
T ss_pred EEHHHHHhCCHHHHHHHHHHHHHhhCCC
Confidence 999999999865 5677652 45554
No 48
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.17 E-value=2.6e-11 Score=124.15 Aligned_cols=133 Identities=20% Similarity=0.245 Sum_probs=96.4
Q ss_pred ccCCccccceeecccccCCCccccCceeeecchHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCC
Q psy11730 243 RTPLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYN 321 (496)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s 321 (496)
...+|..+...+.++.|+.+..+ .....+.|..... .++++|||||||+|.+++.+++.|.++|+|+|+|
T Consensus 25 ~~~yf~~ya~~~~~~~~l~d~~r---------~~~~~~~i~~~~~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s 95 (376)
T 3r0q_C 25 YAQYFCTYSFLYHQKDMLSDRVR---------MDAYFNAVFQNKHHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT 95 (376)
T ss_dssp ---CTTGGGCHHHHHHHHTCHHH---------HHHHHHHHHTTTTTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS
T ss_pred HHHHHHHHHHhHHHHHHhcChHH---------HHHHHHHHHhccccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH
Confidence 34677777777777777777433 2334455555543 5688999999999999999999988899999999
Q ss_pred HHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccccc---cchHhHhhee--eecCCC
Q psy11730 322 QEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSV---ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 322 ~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~---~~~~~~~~~~--~l~p~~ 389 (496)
.|++.|+++....+ ...+++++.+|++++.. .++||+|+++.+.+++ ..++.+++.+ .|.|+|
T Consensus 96 -~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG 163 (376)
T 3r0q_C 96 -KMADHARALVKANN--LDHIVEVIEGSVEDISL--PEKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTG 163 (376)
T ss_dssp -TTHHHHHHHHHHTT--CTTTEEEEESCGGGCCC--SSCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEE
T ss_pred -HHHHHHHHHHHHcC--CCCeEEEEECchhhcCc--CCcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCe
Confidence 99999877653332 34569999999998875 3899999998776666 4466666542 445544
No 49
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.17 E-value=6.1e-11 Score=118.02 Aligned_cols=108 Identities=11% Similarity=0.049 Sum_probs=86.2
Q ss_pred HHHHHhCCC-C-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 279 LNFIKDNVA-V-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 279 ~~~l~~~~~-~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+.+.+... + ++.+|||||||+|.++..+++....+|+|+|+|+.|++.|+++....+ ...+++++.+|+.+++..
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELR--IDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCTTSCCCC
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhcCCCC
Confidence 445555554 4 477999999999999999998855789999999999999987754332 345899999999987643
Q ss_pred CCCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
+++||+|++..+++|+ ++..+++.. .|.|+|.
T Consensus 183 -~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~ 216 (312)
T 3vc1_A 183 -KGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGR 216 (312)
T ss_dssp -TTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEE
T ss_pred -CCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcE
Confidence 5899999999999999 588887763 6777664
No 50
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.17 E-value=4.4e-11 Score=113.95 Aligned_cols=92 Identities=12% Similarity=0.117 Sum_probs=77.3
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++.. .+++++.+|++++. .+++||+|++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~-------~~v~~~~~d~~~~~--~~~~fD~v~~~ 110 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLK-------DGITYIHSRFEDAQ--LPRRYDNIVLT 110 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSC-------SCEEEEESCGGGCC--CSSCEEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhh-------CCeEEEEccHHHcC--cCCcccEEEEh
Confidence 3677999999999999999988775 79999999999999887641 17999999998873 36899999999
Q ss_pred cccccccchHhHhhee---eecCCC
Q psy11730 368 ETIYSVANYNKLLTVW---CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~~~~~~~---~l~p~~ 389 (496)
.+++|++++..+++++ .|.|+|
T Consensus 111 ~~l~~~~~~~~~l~~~~~~~LkpgG 135 (250)
T 2p7i_A 111 HVLEHIDDPVALLKRINDDWLAEGG 135 (250)
T ss_dssp SCGGGCSSHHHHHHHHHHTTEEEEE
T ss_pred hHHHhhcCHHHHHHHHHHHhcCCCC
Confidence 9999999998888752 355554
No 51
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.16 E-value=6.6e-11 Score=111.45 Aligned_cols=107 Identities=20% Similarity=0.239 Sum_probs=83.7
Q ss_pred HHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 276 FDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 276 ~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..+.+.+.+... .+.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++.... ..+++++.+|+.+++.
T Consensus 26 ~~~~~~l~~~~~-~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~ 99 (227)
T 1ve3_A 26 ETLEPLLMKYMK-KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSR----ESNVEFIVGDARKLSF 99 (227)
T ss_dssp HHHHHHHHHSCC-SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCTTSCCS
T ss_pred HHHHHHHHHhcC-CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhc----CCCceEEECchhcCCC
Confidence 345566665543 378999999999999999998877 8999999999999988765322 2679999999988664
Q ss_pred cCCCceeEEEEccc--cccccchHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSET--IYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~--l~~~~~~~~~~~~~--~l~p~~ 389 (496)
. .++||+|+++.+ +++..+...+++.. .|.|+|
T Consensus 100 ~-~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG 136 (227)
T 1ve3_A 100 E-DKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSG 136 (227)
T ss_dssp C-TTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEE
T ss_pred C-CCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCc
Confidence 3 578999999999 66667777777663 566654
No 52
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.16 E-value=3.2e-11 Score=111.83 Aligned_cols=90 Identities=17% Similarity=0.161 Sum_probs=77.0
Q ss_pred CCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSET 369 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~ 369 (496)
+.+|||||||+|.++..++..+. +|+|+|+|+.|++.++++ ..++.++.+|+.+++.. +++||+|++..+
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~~-~~~fD~v~~~~~ 111 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQT--------HPSVTFHHGTITDLSDS-PKRWAGLLAWYS 111 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHH--------CTTSEEECCCGGGGGGS-CCCEEEEEEESS
T ss_pred CCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHh--------CCCCeEEeCcccccccC-CCCeEEEEehhh
Confidence 78999999999999999998865 899999999999998865 24789999999987654 689999999999
Q ss_pred ccccc--chHhHhhee--eecCCC
Q psy11730 370 IYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 370 l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
++|++ +...+++.. .|.|+|
T Consensus 112 l~~~~~~~~~~~l~~~~~~L~pgG 135 (203)
T 3h2b_A 112 LIHMGPGELPDALVALRMAVEDGG 135 (203)
T ss_dssp STTCCTTTHHHHHHHHHHTEEEEE
T ss_pred HhcCCHHHHHHHHHHHHHHcCCCc
Confidence 99996 778888763 566655
No 53
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.15 E-value=7.8e-11 Score=113.54 Aligned_cols=96 Identities=16% Similarity=0.193 Sum_probs=80.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++. .....++.+..+|+++++.. +++||+|++..
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~~~d~~~~~~~-~~~fD~v~~~~ 112 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKI----AGVDRKVQVVQADARAIPLP-DESVHGVIVVH 112 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHT----TTSCTTEEEEESCTTSCCSC-TTCEEEEEEES
T ss_pred CCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHh----hccCCceEEEEcccccCCCC-CCCeeEEEECC
Confidence 47899999999999999998875 68999999999999988764 12356899999999887643 67899999999
Q ss_pred ccccccchHhHhhee--eecCCCC
Q psy11730 369 TIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 369 ~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
+++|+++...++++. .|.|+|.
T Consensus 113 ~l~~~~~~~~~l~~~~~~L~pgG~ 136 (263)
T 2yqz_A 113 LWHLVPDWPKVLAEAIRVLKPGGA 136 (263)
T ss_dssp CGGGCTTHHHHHHHHHHHEEEEEE
T ss_pred chhhcCCHHHHHHHHHHHCCCCcE
Confidence 999999999888763 6677653
No 54
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.15 E-value=3.3e-11 Score=115.12 Aligned_cols=97 Identities=14% Similarity=0.160 Sum_probs=79.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++....+ ..++.++.+|+.+++.. .++||+|++..
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~~-~~~fD~v~~~~ 154 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEG---KRVRNYFCCGLQDFTPE-PDSYDVIWIQW 154 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGG---GGEEEEEECCGGGCCCC-SSCEEEEEEES
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcC---CceEEEEEcChhhcCCC-CCCEEEEEEcc
Confidence 478999999999999999988887799999999999999987654321 34789999998887653 56899999999
Q ss_pred ccccccchH--hHhhee--eecCCC
Q psy11730 369 TIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
+++|+++.. .+++.. .|.|++
T Consensus 155 ~l~~~~~~~~~~~l~~~~~~LkpgG 179 (241)
T 2ex4_A 155 VIGHLTDQHLAEFLRRCKGSLRPNG 179 (241)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred hhhhCCHHHHHHHHHHHHHhcCCCe
Confidence 999998744 666652 566655
No 55
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.15 E-value=5.1e-11 Score=111.83 Aligned_cols=91 Identities=19% Similarity=0.180 Sum_probs=77.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++.. .+++++.+|+.+++.. ++||+|++..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~-------~~~~~~~~d~~~~~~~--~~fD~v~~~~ 114 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAG-RTVYGIEPSREMRMIAKEKLP-------KEFSITEGDFLSFEVP--TSIDTIVSTY 114 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTT-CEEEEECSCHHHHHHHHHHSC-------TTCCEESCCSSSCCCC--SCCSEEEEES
T ss_pred CCCeEEEeCCCCCHHHHHHHhCC-CeEEEEeCCHHHHHHHHHhCC-------CceEEEeCChhhcCCC--CCeEEEEECc
Confidence 67899999999999999999885 589999999999999887541 5789999999988763 8999999999
Q ss_pred ccccccchHh--Hhhee--eecCCC
Q psy11730 369 TIYSVANYNK--LLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~~~--~~~~~--~l~p~~ 389 (496)
+++|+++.+. ++++. .|.|+|
T Consensus 115 ~l~~~~~~~~~~~l~~~~~~LkpgG 139 (220)
T 3hnr_A 115 AFHHLTDDEKNVAIAKYSQLLNKGG 139 (220)
T ss_dssp CGGGSCHHHHHHHHHHHHHHSCTTC
T ss_pred chhcCChHHHHHHHHHHHHhcCCCC
Confidence 9999998876 77653 566665
No 56
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.15 E-value=1.9e-11 Score=116.94 Aligned_cols=113 Identities=19% Similarity=0.242 Sum_probs=85.3
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
|+..+ .+.+.+....+|.+|||||||+|..+..+++.++.+|+|||+|+.|++.|+++... ...++.++.+|++
T Consensus 45 we~~~--m~~~a~~~~~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~----~~~~~~~~~~~a~ 118 (236)
T 3orh_A 45 WETPY--MHALAAAASSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPR----QTHKVIPLKGLWE 118 (236)
T ss_dssp GGHHH--HHHHHHHHTTTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGG----CSSEEEEEESCHH
T ss_pred HHHHH--HHHHHHhhccCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhh----CCCceEEEeehHH
Confidence 55432 23333333457899999999999999999888888999999999999999876533 3467889999988
Q ss_pred Cccc-cCCCceeEEEE-----ccccccccchHhHhhe--eeecCCCC
Q psy11730 352 SLSA-VIHSKFDIILT-----SETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 352 ~~~~-~~~~~fD~Ii~-----~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
++.. ..+++||.|+. ...++|..+.+.++++ .+|.|+|.
T Consensus 119 ~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~ 165 (236)
T 3orh_A 119 DVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGV 165 (236)
T ss_dssp HHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEE
T ss_pred hhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCE
Confidence 7543 23678999985 4556677788888876 37788763
No 57
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.14 E-value=7.7e-11 Score=113.39 Aligned_cols=99 Identities=17% Similarity=0.153 Sum_probs=81.8
Q ss_pred HHHhCCC-CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC
Q psy11730 281 FIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH 358 (496)
Q Consensus 281 ~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 358 (496)
.+..... .++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++ ..++.+..+|+++++ .+
T Consensus 24 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~--------~~~~~~~~~d~~~~~--~~ 93 (259)
T 2p35_A 24 DLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADR--------LPNTNFGKADLATWK--PA 93 (259)
T ss_dssp HHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHH--------STTSEEEECCTTTCC--CS
T ss_pred HHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHh--------CCCcEEEECChhhcC--cc
Confidence 3444443 357899999999999999998875 36899999999999998764 347899999999877 36
Q ss_pred CceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 359 SKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
++||+|++..+++|++++..+++.. .|.|+|
T Consensus 94 ~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 126 (259)
T 2p35_A 94 QKADLLYANAVFQWVPDHLAVLSQLMDQLESGG 126 (259)
T ss_dssp SCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEE
T ss_pred CCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCe
Confidence 8999999999999999999988763 666765
No 58
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.14 E-value=4.4e-11 Score=111.48 Aligned_cols=97 Identities=16% Similarity=0.164 Sum_probs=75.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||+|||+|.+++.+++.+..+|+|+|+|+.|++.|+++....+ ..+++++++|+.+......+.||+|++++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~---~~~v~~~~~D~~~~~~~~~~~fD~V~~~~ 130 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLK---AGNARVVNSNAMSFLAQKGTPHNIVFVDP 130 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTT---CCSEEEECSCHHHHHSSCCCCEEEEEECC
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEECCHHHHHhhcCCCCCEEEECC
Confidence 678999999999999999888888899999999999999987654332 36899999998874333357899999998
Q ss_pred ccccccchHhHhhee----eecCCC
Q psy11730 369 TIYSVANYNKLLTVW----CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~~~~~~~~----~l~p~~ 389 (496)
+++ ..+...+++.+ .|.|++
T Consensus 131 p~~-~~~~~~~l~~l~~~~~L~pgG 154 (202)
T 2fpo_A 131 PFR-RGLLEETINLLEDNGWLADEA 154 (202)
T ss_dssp SSS-TTTHHHHHHHHHHTTCEEEEE
T ss_pred CCC-CCcHHHHHHHHHhcCccCCCc
Confidence 844 55666655542 255554
No 59
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=3.3e-11 Score=114.90 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=73.0
Q ss_pred CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc--cccCCCceeEE
Q psy11730 287 AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL--SAVIHSKFDII 364 (496)
Q Consensus 287 ~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~fD~I 364 (496)
..++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++.... ..++.++.+|+.++ +.. +++||+|
T Consensus 58 ~~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~-~~~fD~V 132 (236)
T 1zx0_A 58 SSKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQ----THKVIPLKGLWEDVAPTLP-DGHFDGI 132 (236)
T ss_dssp TTTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGC----SSEEEEEESCHHHHGGGSC-TTCEEEE
T ss_pred CCCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhc----CCCeEEEecCHHHhhcccC-CCceEEE
Confidence 3467899999999999999998777779999999999999998765322 26799999999887 332 5899999
Q ss_pred EE-cccc----ccccchHhHhhe--eeecCCC
Q psy11730 365 LT-SETI----YSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 365 i~-~~~l----~~~~~~~~~~~~--~~l~p~~ 389 (496)
++ ..++ .+..+.+.++++ ..|.|+|
T Consensus 133 ~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG 164 (236)
T 1zx0_A 133 LYDTYPLSEETWHTHQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp EECCCCCBGGGTTTHHHHHHHHTHHHHEEEEE
T ss_pred EECCcccchhhhhhhhHHHHHHHHHHhcCCCe
Confidence 99 4443 122233344554 2566665
No 60
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.13 E-value=2.9e-11 Score=130.40 Aligned_cols=88 Identities=22% Similarity=0.275 Sum_probs=74.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-CCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-IHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~Ii~~ 367 (496)
.+.+|||||||+|.++..||+.|+ .|+|||.|+.+++.|+..+...+ ..+++|.+++++++... .+++||+|+|.
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~---~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 141 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENP---DFAAEFRVGRIEEVIAALEEGEFDLAIGL 141 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTST---TSEEEEEECCHHHHHHHCCTTSCSEEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcC---CCceEEEECCHHHHhhhccCCCccEEEEC
Confidence 456999999999999999999986 69999999999999987664332 34799999999987432 25789999999
Q ss_pred cccccccchHhHh
Q psy11730 368 ETIYSVANYNKLL 380 (496)
Q Consensus 368 ~~l~~~~~~~~~~ 380 (496)
.+++|++++..+.
T Consensus 142 e~~ehv~~~~~~~ 154 (569)
T 4azs_A 142 SVFHHIVHLHGID 154 (569)
T ss_dssp SCHHHHHHHHCHH
T ss_pred cchhcCCCHHHHH
Confidence 9999999887554
No 61
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.13 E-value=3.1e-11 Score=115.23 Aligned_cols=95 Identities=19% Similarity=0.119 Sum_probs=77.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.|++.|+++....+ ...+++++++|+.+++. .++||+|++++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~--~~~~D~v~~~~ 152 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYG--IADKIEFICGDFLLLAS--FLKADVVFLSP 152 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHGG--GCCCSEEEECC
T ss_pred CCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcC--CCcCeEEEECChHHhcc--cCCCCEEEECC
Confidence 68899999999999999999987 789999999999999987654332 12589999999988763 67999999999
Q ss_pred ccccccchHhHhhe--eeecCC
Q psy11730 369 TIYSVANYNKLLTV--WCLFPT 388 (496)
Q Consensus 369 ~l~~~~~~~~~~~~--~~l~p~ 388 (496)
++++..+....+.. ..|.|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~L~pg 174 (241)
T 3gdh_A 153 PWGGPDYATAETFDIRTMMSPD 174 (241)
T ss_dssp CCSSGGGGGSSSBCTTTSCSSC
T ss_pred CcCCcchhhhHHHHHHhhcCCc
Confidence 99998877654443 234444
No 62
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.12 E-value=8.5e-11 Score=109.66 Aligned_cols=97 Identities=16% Similarity=0.122 Sum_probs=78.7
Q ss_pred HHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCC
Q psy11730 280 NFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHS 359 (496)
Q Consensus 280 ~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 359 (496)
+.+..... ++.+|||||||+|.++..+ +..+|+|+|+|+.|++.++++. .++.++.+|+.+++.. ++
T Consensus 28 ~~l~~~~~-~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~~-~~ 94 (211)
T 2gs9_A 28 RALKGLLP-PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA--------PEATWVRAWGEALPFP-GE 94 (211)
T ss_dssp HHHHTTCC-CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC--------TTSEEECCCTTSCCSC-SS
T ss_pred HHHHHhcC-CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcccccCCCC-CC
Confidence 34444433 7889999999999999886 4458999999999999988653 4688999999887643 57
Q ss_pred ceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 360 KFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 360 ~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+||+|++..+++|++++..++++. .|.|++
T Consensus 95 ~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 126 (211)
T 2gs9_A 95 SFDVVLLFTTLEFVEDVERVLLEARRVLRPGG 126 (211)
T ss_dssp CEEEEEEESCTTTCSCHHHHHHHHHHHEEEEE
T ss_pred cEEEEEEcChhhhcCCHHHHHHHHHHHcCCCC
Confidence 899999999999999999888763 566665
No 63
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.12 E-value=1.2e-10 Score=107.09 Aligned_cols=96 Identities=26% Similarity=0.360 Sum_probs=78.6
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ ..++++..+|+.+++. .++||+|++.
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~~~d~~~~~~--~~~~D~v~~~ 104 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANG-YDVDAWDKNAMSIANVERIKSIEN---LDNLHTRVVDLNNLTF--DRQYDFILST 104 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEECCGGGCCC--CCCEEEEEEE
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhCC---CCCcEEEEcchhhCCC--CCCceEEEEc
Confidence 357899999999999999999885 489999999999999887653322 3479999999988765 6899999999
Q ss_pred ccccccc--chHhHhhee--eecCCC
Q psy11730 368 ETIYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
.+++|++ +...+++.. .|.|++
T Consensus 105 ~~l~~~~~~~~~~~l~~~~~~L~~gG 130 (199)
T 2xvm_A 105 VVLMFLEAKTIPGLIANMQRCTKPGG 130 (199)
T ss_dssp SCGGGSCGGGHHHHHHHHHHTEEEEE
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCe
Confidence 9999997 777777652 566655
No 64
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.12 E-value=4.2e-11 Score=120.23 Aligned_cols=132 Identities=26% Similarity=0.305 Sum_probs=92.3
Q ss_pred CCccccceeecccccCCCccccCceeeecchHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHH
Q psy11730 245 PLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQE 323 (496)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~ 323 (496)
.||+.+.....+..|+.+..+...| .+.|.+.. ..++++|||||||+|.+++.+++.+..+|+|+|+| .
T Consensus 2 ~Yf~~y~~~~~~~~ml~d~~r~~~y---------~~ai~~~~~~~~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~ 71 (328)
T 1g6q_1 2 YYFDSYDHYGIHEEMLQDTVRTLSY---------RNAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-S 71 (328)
T ss_dssp CCCCCCCCHHHHHHHHTCHHHHHHH---------HHHHHHHHHHHTTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-T
T ss_pred chhhhhcCchHHHHHhcCHHHHHHH---------HHHHHhhHhhcCCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-H
Confidence 4677777777788888876543211 22222211 13578999999999999999999888899999999 6
Q ss_pred HHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccccc---cchHhHhhe--eeecCCC
Q psy11730 324 VIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSV---ANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 324 ~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~---~~~~~~~~~--~~l~p~~ 389 (496)
|++.|+++...++ ...+++++.+|+++++.. .++||+|++..+.+++ ..++.++.. ..|.|+|
T Consensus 72 ~~~~a~~~~~~~~--~~~~i~~~~~d~~~~~~~-~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG 139 (328)
T 1g6q_1 72 IIEMAKELVELNG--FSDKITLLRGKLEDVHLP-FPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGG 139 (328)
T ss_dssp HHHHHHHHHHHTT--CTTTEEEEESCTTTSCCS-SSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEE
T ss_pred HHHHHHHHHHHcC--CCCCEEEEECchhhccCC-CCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCe
Confidence 9988876643322 345799999999987653 4789999998765544 456666653 2445544
No 65
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.12 E-value=1.6e-10 Score=115.04 Aligned_cols=110 Identities=13% Similarity=0.197 Sum_probs=86.2
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+++.+.+...+ ++.+|||||||+|.++..+++....+|+|+|+|+.|++.++++....+ ...++++..+|+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~ 152 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASID--TNRSRQVLLQGWEDF 152 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSC--CSSCEEEEESCGGGC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECChHHC
Confidence 34456666666654 478999999999999999998744589999999999999987653322 235799999998776
Q ss_pred cccCCCceeEEEEccccccc--cchHhHhhee--eecCCCC
Q psy11730 354 SAVIHSKFDIILTSETIYSV--ANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~--~~~~~~~~~~--~l~p~~~ 390 (496)
+ ++||+|++..+++|+ +++..++++. .|.|+|.
T Consensus 153 ~----~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~ 189 (318)
T 2fk8_A 153 A----EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGR 189 (318)
T ss_dssp C----CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCE
T ss_pred C----CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcE
Confidence 3 789999999999999 6778888763 5667653
No 66
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.12 E-value=9.2e-11 Score=111.27 Aligned_cols=95 Identities=19% Similarity=0.304 Sum_probs=78.6
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++... ..+++++.+|+.+++.. ++||+|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~-----~~~~~~~~~d~~~~~~~--~~fD~v~~ 115 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRG-----NLKVKYIEADYSKYDFE--EKYDMVVS 115 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCS-----CTTEEEEESCTTTCCCC--SCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhcc-----CCCEEEEeCchhccCCC--CCceEEEE
Confidence 457899999999999999999886 47899999999999998876522 23899999999988763 89999999
Q ss_pred ccccccccchH--hHhhe--eeecCCC
Q psy11730 367 SETIYSVANYN--KLLTV--WCLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~--~~~~~--~~l~p~~ 389 (496)
..+++|+++.+ .++++ ..|.|+|
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG 142 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESG 142 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCc
Confidence 99999998766 36665 2667765
No 67
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.12 E-value=1.1e-10 Score=114.42 Aligned_cols=105 Identities=18% Similarity=0.300 Sum_probs=84.3
Q ss_pred HHHHHhCC-C-CCCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 279 LNFIKDNV-A-VDKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 279 ~~~l~~~~-~-~~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
+.++.+.. . .++.+|||||||+|.++..+++..+ .+|+|+|+|+.|++.++++.... ..++++..+|+.+++
T Consensus 10 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~ 85 (284)
T 3gu3_A 10 VSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLL----PYDSEFLEGDATEIE 85 (284)
T ss_dssp HHHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSS----SSEEEEEESCTTTCC
T ss_pred HHHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEEcchhhcC
Confidence 34444433 3 3578999999999999999988743 68999999999999988765322 238999999999876
Q ss_pred ccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 355 AVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
. .++||+|++..+++|++++..+++.. .|.|++
T Consensus 86 ~--~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG 120 (284)
T 3gu3_A 86 L--NDKYDIAICHAFLLHMTTPETMLQKMIHSVKKGG 120 (284)
T ss_dssp C--SSCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEE
T ss_pred c--CCCeeEEEECChhhcCCCHHHHHHHHHHHcCCCC
Confidence 5 57999999999999999999988763 666665
No 68
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.11 E-value=1.3e-10 Score=108.48 Aligned_cols=91 Identities=15% Similarity=0.144 Sum_probs=75.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.+++. ...+++++.+|+.++ ...++||+|++..
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~s~~~~~~a~~~-------~~~~~~~~~~d~~~~--~~~~~~D~v~~~~ 115 (218)
T 3ou2_A 46 IRGDVLELASGTGYWTRHLSGLA-DRVTALDGSAEMIAEAGRH-------GLDNVEFRQQDLFDW--TPDRQWDAVFFAH 115 (218)
T ss_dssp SCSEEEEESCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHGGG-------CCTTEEEEECCTTSC--CCSSCEEEEEEES
T ss_pred CCCeEEEECCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHhc-------CCCCeEEEecccccC--CCCCceeEEEEec
Confidence 46799999999999999999885 5899999999999999872 246799999999887 2368999999999
Q ss_pred ccccccch--HhHhhe--eeecCCC
Q psy11730 369 TIYSVANY--NKLLTV--WCLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~--~~~~~~--~~l~p~~ 389 (496)
+++|+++. ..+++. ..|.|++
T Consensus 116 ~l~~~~~~~~~~~l~~~~~~L~pgG 140 (218)
T 3ou2_A 116 WLAHVPDDRFEAFWESVRSAVAPGG 140 (218)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred hhhcCCHHHHHHHHHHHHHHcCCCe
Confidence 99999885 666655 2566654
No 69
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.1e-10 Score=114.11 Aligned_cols=90 Identities=19% Similarity=0.197 Sum_probs=77.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++ ...+|+|+|+|+.|++.++++. .++.+..+|+++++. .++||+|++..
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~-~~~~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~--~~~fD~v~~~~ 125 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ-SGAEVLGTDNAATMIEKARQNY--------PHLHFDVADARNFRV--DKPLDAVFSNA 125 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHC--------TTSCEEECCTTTCCC--SSCEEEEEEES
T ss_pred CCCEEEEecCCCCHHHHHHHh-CCCeEEEEECCHHHHHHHHhhC--------CCCEEEECChhhCCc--CCCcCEEEEcc
Confidence 578999999999999999988 4468999999999999987642 578899999998775 57999999999
Q ss_pred ccccccchHhHhhee--eecCCC
Q psy11730 369 TIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++|++++..++++. .|.|+|
T Consensus 126 ~l~~~~d~~~~l~~~~~~LkpgG 148 (279)
T 3ccf_A 126 MLHWVKEPEAAIASIHQALKSGG 148 (279)
T ss_dssp CGGGCSCHHHHHHHHHHHEEEEE
T ss_pred hhhhCcCHHHHHHHHHHhcCCCc
Confidence 999999999988773 677765
No 70
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.11 E-value=6.9e-11 Score=116.09 Aligned_cols=100 Identities=21% Similarity=0.097 Sum_probs=80.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++....+ ...++.++.+|+.+.+....++||+|++.
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 140 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMK--RRFKVFFRAQDSYGRHMDLGKEFDVISSQ 140 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSC--CSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC--CCccEEEEECCccccccCCCCCcCEEEEC
Confidence 4678999999999999999888887799999999999999887653321 23579999999998765336799999999
Q ss_pred ccccc----ccchHhHhhee--eecCCC
Q psy11730 368 ETIYS----VANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~----~~~~~~~~~~~--~l~p~~ 389 (496)
.+++| ..+...+++.. .|.|+|
T Consensus 141 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG 168 (298)
T 1ri5_A 141 FSFHYAFSTSESLDIAQRNIARHLRPGG 168 (298)
T ss_dssp SCGGGGGSSHHHHHHHHHHHHHTEEEEE
T ss_pred chhhhhcCCHHHHHHHHHHHHHhcCCCC
Confidence 99977 46667777652 566665
No 71
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.11 E-value=1.4e-10 Score=109.66 Aligned_cols=84 Identities=17% Similarity=0.251 Sum_probs=66.8
Q ss_pred CCCCeEEEecCc-CCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCG-AGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcG-tG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.++.+|||+||| +|.+++.+++.+..+|+|+|+|+.+++.|+++....+ . +++++.+|+..+.....++||+|++
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~-~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNN---S-NVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTT---C-CCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhC---C-CcEEEeCCchhhhhcccCceeEEEE
Confidence 368899999999 9999999998866789999999999999987654332 2 8999999976554333589999999
Q ss_pred ccccccccc
Q psy11730 367 SETIYSVAN 375 (496)
Q Consensus 367 ~~~l~~~~~ 375 (496)
++++++..+
T Consensus 130 npp~~~~~~ 138 (230)
T 3evz_A 130 APPYYDKPL 138 (230)
T ss_dssp CCCCC----
T ss_pred CCCCcCCcc
Confidence 999877654
No 72
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.11 E-value=1.6e-10 Score=107.00 Aligned_cols=86 Identities=26% Similarity=0.324 Sum_probs=67.0
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
++..+......++.+|||+|||+|.++..+++.+..+|+|+|+|+.|++.++++.. +++++.+|+.+++
T Consensus 40 l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~--------~~~~~~~d~~~~~--- 108 (200)
T 1ne2_A 40 FLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETAKRNCG--------GVNFMVADVSEIS--- 108 (200)
T ss_dssp HHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCHHHHHHHHHHCT--------TSEEEECCGGGCC---
T ss_pred HHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCHHHHHHHHHhcC--------CCEEEECcHHHCC---
Confidence 34444333344688999999999999999998877789999999999999887541 7899999998853
Q ss_pred CCceeEEEEccccccccc
Q psy11730 358 HSKFDIILTSETIYSVAN 375 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~~~ 375 (496)
++||+|++++++++...
T Consensus 109 -~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 109 -GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp -CCEEEEEECCCC-----
T ss_pred -CCeeEEEECCCchhccC
Confidence 68999999999999864
No 73
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.11 E-value=6.1e-11 Score=110.42 Aligned_cols=99 Identities=17% Similarity=0.228 Sum_probs=75.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-CCCc-eeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-IHSK-FDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~-fD~Ii~ 366 (496)
++.+|||+|||+|.+++.++..+..+|+|+|+|+.|++.|+++....+. ...+++++.+|+.+.... ..++ ||+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKC-SSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTC-CTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCC-CccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 6789999999999999998888888999999999999999876543221 015899999998876432 2468 999999
Q ss_pred ccccccccchHhHhhee----eecCCC
Q psy11730 367 SETIYSVANYNKLLTVW----CLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~----~l~p~~ 389 (496)
+++++ ..+.+.+++.+ .|.|++
T Consensus 132 ~~~~~-~~~~~~~l~~~~~~~~LkpgG 157 (201)
T 2ift_A 132 DPPFH-FNLAEQAISLLCENNWLKPNA 157 (201)
T ss_dssp CCCSS-SCHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCC-CccHHHHHHHHHhcCccCCCc
Confidence 99954 56666666543 255554
No 74
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.11 E-value=1.1e-10 Score=108.86 Aligned_cols=107 Identities=18% Similarity=0.322 Sum_probs=83.2
Q ss_pred HHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 276 FDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 276 ~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..+.+.|.... .++.+|||||||+|.++..+++.+..+|+|+|+|+.+++.++++.. ...++.+..+|+.+++.
T Consensus 30 ~~~~~~l~~~~-~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~-----~~~~i~~~~~d~~~~~~ 103 (215)
T 2pxx_A 30 SSFRALLEPEL-RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYA-----HVPQLRWETMDVRKLDF 103 (215)
T ss_dssp HHHHHHHGGGC-CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTT-----TCTTCEEEECCTTSCCS
T ss_pred HHHHHHHHHhc-CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcc-----cCCCcEEEEcchhcCCC
Confidence 34566666554 4578999999999999999999987799999999999999887652 13589999999988754
Q ss_pred cCCCceeEEEEcccccccc---------------chHhHhhe--eeecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVA---------------NYNKLLTV--WCLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~---------------~~~~~~~~--~~l~p~~ 389 (496)
. +++||+|++..+++++. +...+++. ..|.|++
T Consensus 104 ~-~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 153 (215)
T 2pxx_A 104 P-SASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGG 153 (215)
T ss_dssp C-SSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEE
T ss_pred C-CCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCC
Confidence 3 57899999999987664 45566655 2566654
No 75
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.11 E-value=1.1e-10 Score=109.04 Aligned_cols=89 Identities=19% Similarity=0.254 Sum_probs=75.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++. ++.+..+|+.+++ ..++||+|++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~---------~~~~~~~d~~~~~--~~~~fD~v~~~~ 110 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL---------GRPVRTMLFHQLD--AIDAYDAVWAHA 110 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---------TSCCEECCGGGCC--CCSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc---------CCceEEeeeccCC--CCCcEEEEEecC
Confidence 478999999999999999998854 8999999999999988653 4667889988877 378999999999
Q ss_pred cccccc--chHhHhhee--eecCCC
Q psy11730 369 TIYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
+++|++ +...+++.. .|.|+|
T Consensus 111 ~l~~~~~~~~~~~l~~~~~~LkpgG 135 (211)
T 3e23_A 111 CLLHVPRDELADVLKLIWRALKPGG 135 (211)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred chhhcCHHHHHHHHHHHHHhcCCCc
Confidence 999997 777777663 566655
No 76
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.10 E-value=5.8e-11 Score=106.89 Aligned_cols=101 Identities=17% Similarity=0.187 Sum_probs=78.7
Q ss_pred cchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC
Q psy11730 273 ECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352 (496)
Q Consensus 273 ~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~ 352 (496)
.....+++.+. ..++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++ ..++++..+|
T Consensus 4 ~~~~~~~~~~~---~~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~--------~~~v~~~~~d--- 68 (170)
T 3i9f_A 4 ERPEEYLPNIF---EGKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEK--------FDSVITLSDP--- 68 (170)
T ss_dssp --CTTTHHHHH---SSCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHH--------CTTSEEESSG---
T ss_pred cCHHHHHHhcC---cCCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHh--------CCCcEEEeCC---
Confidence 33344444443 22567999999999999999998885 999999999999998865 3478889888
Q ss_pred ccccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 353 LSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 353 ~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.+. .+++||+|++..+++|++++..++++. .|.|++
T Consensus 69 ~~~-~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG 106 (170)
T 3i9f_A 69 KEI-PDNSVDFILFANSFHDMDDKQHVISEVKRILKDDG 106 (170)
T ss_dssp GGS-CTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEE
T ss_pred CCC-CCCceEEEEEccchhcccCHHHHHHHHHHhcCCCC
Confidence 222 267999999999999999999888763 566655
No 77
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.10 E-value=1.4e-10 Score=104.90 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=70.6
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
.+.+..+++.+... ..++.+|||||||+|.++..+++.+ +|+|+|+|+.|++. ..+++++.+|+.
T Consensus 7 ~~~~~~l~~~l~~~-~~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------------~~~~~~~~~d~~ 71 (170)
T 3q87_B 7 GEDTYTLMDALERE-GLEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------------HRGGNLVRADLL 71 (170)
T ss_dssp CHHHHHHHHHHHHH-TCCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------------CSSSCEEECSTT
T ss_pred CccHHHHHHHHHhh-cCCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------------ccCCeEEECChh
Confidence 45566777775442 3467899999999999999999888 99999999999986 236789999998
Q ss_pred CccccCCCceeEEEEccccccccch
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVANY 376 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~~~ 376 (496)
+... +++||+|++++++++.++.
T Consensus 72 ~~~~--~~~fD~i~~n~~~~~~~~~ 94 (170)
T 3q87_B 72 CSIN--QESVDVVVFNPPYVPDTDD 94 (170)
T ss_dssp TTBC--GGGCSEEEECCCCBTTCCC
T ss_pred hhcc--cCCCCEEEECCCCccCCcc
Confidence 7322 4899999999999876544
No 78
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.10 E-value=7.2e-11 Score=112.24 Aligned_cols=107 Identities=14% Similarity=0.086 Sum_probs=82.6
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+..++.. ..+++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++.... ....+++|+.+|+.+++.
T Consensus 55 ~l~~~~~~-~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~- 129 (235)
T 3lcc_A 55 LIVHLVDT-SSLPLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSS--PKAEYFSFVKEDVFTWRP- 129 (235)
T ss_dssp HHHHHHHT-TCSCCEEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTS--GGGGGEEEECCCTTTCCC-
T ss_pred HHHHHHHh-cCCCCCCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhcc--CCCcceEEEECchhcCCC-
Confidence 34444443 34455699999999999999987654 57999999999999998765321 124579999999998764
Q ss_pred CCCceeEEEEcccccccc--chHhHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSETIYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
..+||+|++..++++++ +...+++.. .|.|++
T Consensus 130 -~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG 165 (235)
T 3lcc_A 130 -TELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDG 165 (235)
T ss_dssp -SSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEE
T ss_pred -CCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCc
Confidence 56999999999999997 777777663 566665
No 79
>2xdv_A MYC-induced nuclear antigen; ribosome biogenesis, nuclear protein; HET: OGA; 2.57A {Homo sapiens}
Probab=99.10 E-value=2.4e-11 Score=125.94 Aligned_cols=46 Identities=13% Similarity=0.207 Sum_probs=37.2
Q ss_pred CCCCCHHHHHHHhcCCCCcEEEecCCCC-CcCC-CCCCHHHHHhhcCCe
Q psy11730 60 VKDYSPQEFIEKYEKPNKPVVIKGVTEN-WNAT-YKWTLEKLGKKYRNQ 106 (496)
Q Consensus 60 ~~~ls~eeF~~~y~~~~~PvVi~g~~~~-WpA~-~~Wt~~~L~~~~g~~ 106 (496)
...+|+++|.++|.. .+|+||++...+ |+++ ..|+.++|.+..++.
T Consensus 23 l~~is~e~F~~~yw~-kkPllIr~~~~~~~~~f~~l~s~~~L~~La~~~ 70 (442)
T 2xdv_A 23 ISPIKTETFFKEFWE-QKPLLIQRDDPALATYYGSLFKLTDLKSLCSRG 70 (442)
T ss_dssp TTTSCHHHHHHHTTT-TSCEEECCCCHHHHHHHHHHCCHHHHSSCC---
T ss_pred hcCCCHHHHHHHhhh-hCcEEeecCCcchhhhhcCcCCHHHHHHHHccC
Confidence 468999999999997 799999998765 8887 468999999887654
No 80
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.10 E-value=1.3e-10 Score=119.21 Aligned_cols=100 Identities=19% Similarity=0.143 Sum_probs=81.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccc-----cCCCCceEEEecccCCc------cc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMN-----TDNLEKCKFYHGDWGSL------SA 355 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~-----~~~~~~v~~~~~d~~~~------~~ 355 (496)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++..... .....+++|+.+|++++ +.
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~ 162 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGV 162 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCC
Confidence 57899999999999999998864 3699999999999999987653221 02236899999999987 33
Q ss_pred cCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
. +++||+|+++.+++|++++..++++. .|.|+|
T Consensus 163 ~-~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG 197 (383)
T 4fsd_A 163 P-DSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGG 197 (383)
T ss_dssp C-TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEE
T ss_pred C-CCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCC
Confidence 2 67999999999999999999998873 677765
No 81
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.09 E-value=1.2e-10 Score=112.80 Aligned_cols=101 Identities=18% Similarity=0.102 Sum_probs=71.4
Q ss_pred HHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc--
Q psy11730 279 LNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-- 355 (496)
Q Consensus 279 ~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 355 (496)
++.+.+... .++.+|||||||+|.+++.+++.+ .+|+|+|+|+.|++.|+++.... ++..++.++..
T Consensus 34 ~~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~g-~~V~gvD~S~~ml~~Ar~~~~~~---------~v~~~~~~~~~~~ 103 (261)
T 3iv6_A 34 RENDIFLENIVPGSTVAVIGASTRFLIEKALERG-ASVTVFDFSQRMCDDLAEALADR---------CVTIDLLDITAEI 103 (261)
T ss_dssp HHHHHHTTTCCTTCEEEEECTTCHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHTSSS---------CCEEEECCTTSCC
T ss_pred HHHHHHhcCCCCcCEEEEEeCcchHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHhc---------cceeeeeeccccc
Confidence 344444444 357899999999999999999886 48999999999999998765221 23344443332
Q ss_pred --cCCCceeEEEEcccccccc--chHhHhhee--eecCCCC
Q psy11730 356 --VIHSKFDIILTSETIYSVA--NYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 356 --~~~~~fD~Ii~~~~l~~~~--~~~~~~~~~--~l~p~~~ 390 (496)
...++||+|+++.+++|+. +...++... .+ |+|.
T Consensus 104 ~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~ 143 (261)
T 3iv6_A 104 PKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGT 143 (261)
T ss_dssp CGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSE
T ss_pred ccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcE
Confidence 2257899999999999874 444455542 45 7663
No 82
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.09 E-value=1.3e-10 Score=114.60 Aligned_cols=102 Identities=18% Similarity=0.196 Sum_probs=77.1
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccC----------------------------
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTD---------------------------- 338 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~---------------------------- 338 (496)
+++++|||||||+|.+++.+++.. ..+|+|+|+|+.|++.|+++.......
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRS 124 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC----------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhccccccccccccccccccccccccccc
Confidence 368899999999999999999874 579999999999999998775332100
Q ss_pred ---------------------------CCCceEEEecccCCcc----ccCCCceeEEEEcccccccc------chHhHhh
Q psy11730 339 ---------------------------NLEKCKFYHGDWGSLS----AVIHSKFDIILTSETIYSVA------NYNKLLT 381 (496)
Q Consensus 339 ---------------------------~~~~v~~~~~d~~~~~----~~~~~~fD~Ii~~~~l~~~~------~~~~~~~ 381 (496)
...+++|.++|+.... ....++||+|+|..+++|+. +...+++
T Consensus 125 ~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~ 204 (292)
T 3g07_A 125 CFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFR 204 (292)
T ss_dssp -----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred cccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHH
Confidence 1158999999987544 11268999999999997775 6666776
Q ss_pred ee--eecCCC
Q psy11730 382 VW--CLFPTH 389 (496)
Q Consensus 382 ~~--~l~p~~ 389 (496)
.+ .|.|+|
T Consensus 205 ~~~~~LkpGG 214 (292)
T 3g07_A 205 RIYRHLRPGG 214 (292)
T ss_dssp HHHHHEEEEE
T ss_pred HHHHHhCCCc
Confidence 63 666765
No 83
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.09 E-value=1.3e-10 Score=113.84 Aligned_cols=94 Identities=21% Similarity=0.239 Sum_probs=77.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....+ . +++++.+|+.+.+. .++||+|+++.
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~~--~~~fD~i~~~~ 192 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKEN---L-NISTALYDINAANI--QENYDFIVSTV 192 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTT---C-CEEEEECCGGGCCC--CSCEEEEEECS
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcC---C-ceEEEEeccccccc--cCCccEEEEcc
Confidence 688999999999999999999865 89999999999999887654332 2 89999999998766 68999999999
Q ss_pred ccccccc--hHhHhhee--eecCCC
Q psy11730 369 TIYSVAN--YNKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~--~~~~~~~~--~l~p~~ 389 (496)
+++|++. ...+++.. .|.|+|
T Consensus 193 ~~~~~~~~~~~~~l~~~~~~LkpgG 217 (286)
T 3m70_A 193 VFMFLNRERVPSIIKNMKEHTNVGG 217 (286)
T ss_dssp SGGGSCGGGHHHHHHHHHHTEEEEE
T ss_pred chhhCCHHHHHHHHHHHHHhcCCCc
Confidence 9999954 44666652 566655
No 84
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.08 E-value=1.6e-10 Score=111.71 Aligned_cols=101 Identities=20% Similarity=0.277 Sum_probs=79.1
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+++.+.... .++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++. .++.++.+|+.+++.
T Consensus 39 ~~~~~l~~~~-~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~- 107 (263)
T 3pfg_A 39 DLAALVRRHS-PKAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRN--------PDAVLHHGDMRDFSL- 107 (263)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTCCC-
T ss_pred HHHHHHHhhC-CCCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhC--------CCCEEEECChHHCCc-
Confidence 3455555443 2568999999999999999988864 7999999999999988753 378999999998776
Q ss_pred CCCceeEEEEcc-cccccc---chHhHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSE-TIYSVA---NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~-~l~~~~---~~~~~~~~~--~l~p~~ 389 (496)
.++||+|++.. +++|+. +...+++.. .|.|+|
T Consensus 108 -~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG 145 (263)
T 3pfg_A 108 -GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDG 145 (263)
T ss_dssp -SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEE
T ss_pred -cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCc
Confidence 68999999998 999995 444555542 555654
No 85
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.07 E-value=1.4e-10 Score=110.61 Aligned_cols=90 Identities=18% Similarity=0.151 Sum_probs=73.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc-ccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS-AVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++ +.++.+|+.+.. ...+++||+|++.
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-----------~~~~~~d~~~~~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK-----------FNVVKSDAIEYLKSLPDKYLDGVMIS 108 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT-----------SEEECSCHHHHHHTSCTTCBSEEEEE
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh-----------cceeeccHHHHhhhcCCCCeeEEEEC
Confidence 468999999999999999988865 699999999999998864 677888887752 2236899999999
Q ss_pred ccccccc--chHhHhhee--eecCCCC
Q psy11730 368 ETIYSVA--NYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 368 ~~l~~~~--~~~~~~~~~--~l~p~~~ 390 (496)
.+++|++ +...++++. .|.|+|.
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~ 135 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSY 135 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCC
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcE
Confidence 9999998 447888763 6777664
No 86
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.06 E-value=2.9e-10 Score=107.40 Aligned_cols=99 Identities=25% Similarity=0.299 Sum_probs=79.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccccccc--CCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNT--DNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
++.+|||||||+|.++..+++.+. +|+|+|+|+.+++.++++....+. ....++.+..+|+.+++.. .++||+|++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~ 107 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFH-DSSFDFAVM 107 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSC-TTCEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCC-CCceeEEEE
Confidence 578999999999999999998854 899999999999998876533221 1134789999999987654 689999999
Q ss_pred ccccccccchH---hHhhee--eecCCC
Q psy11730 367 SETIYSVANYN---KLLTVW--CLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~---~~~~~~--~l~p~~ 389 (496)
..+++|+++++ .+++.. .|.|++
T Consensus 108 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG 135 (235)
T 3sm3_A 108 QAFLTSVPDPKERSRIIKEVFRVLKPGA 135 (235)
T ss_dssp ESCGGGCCCHHHHHHHHHHHHHHEEEEE
T ss_pred cchhhcCCCHHHHHHHHHHHHHHcCCCe
Confidence 99999999887 666652 566655
No 87
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.06 E-value=3.6e-10 Score=104.27 Aligned_cols=81 Identities=14% Similarity=0.131 Sum_probs=66.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||+|||+|.++..+++.. ..+|+|+|+|+.+++.|+++....+ ...+++++.+|+.++.....++||+|+
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~v~ 98 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLN--LIDRVTLIKDGHQNMDKYIDCPVKAVM 98 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTT--CGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHhhhccCCceEEE
Confidence 457899999999999999998873 3699999999999999987754322 236899999999888654468999999
Q ss_pred Ecccc
Q psy11730 366 TSETI 370 (496)
Q Consensus 366 ~~~~l 370 (496)
++.++
T Consensus 99 ~~~~~ 103 (197)
T 3eey_A 99 FNLGY 103 (197)
T ss_dssp EEESB
T ss_pred EcCCc
Confidence 98766
No 88
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.06 E-value=5.7e-11 Score=115.35 Aligned_cols=104 Identities=14% Similarity=0.117 Sum_probs=75.0
Q ss_pred CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccC--------------------------CC
Q psy11730 287 AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD--------------------------NL 340 (496)
Q Consensus 287 ~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~--------------------------~~ 340 (496)
..++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++....... ..
T Consensus 53 ~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~ 132 (263)
T 2a14_A 53 GLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLR 132 (263)
T ss_dssp SCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHH
T ss_pred CCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHH
Confidence 4567899999999999998878888889999999999999887643211000 01
Q ss_pred CceE-EEecccCCccc-c--CCCceeEEEEccccccc----cchHhHhhe--eeecCCCC
Q psy11730 341 EKCK-FYHGDWGSLSA-V--IHSKFDIILTSETIYSV----ANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 341 ~~v~-~~~~d~~~~~~-~--~~~~fD~Ii~~~~l~~~----~~~~~~~~~--~~l~p~~~ 390 (496)
.++. ++.+|+.+... . ..++||+|+++.+++|+ +++..++++ ..|.|+|.
T Consensus 133 ~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~ 192 (263)
T 2a14_A 133 AAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGH 192 (263)
T ss_dssp HHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcE
Confidence 1343 88899887422 1 24689999999999986 455566665 36777763
No 89
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.06 E-value=5.6e-10 Score=103.81 Aligned_cols=89 Identities=25% Similarity=0.309 Sum_probs=71.5
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
++..+......++.+|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++....+ . +++++.+|+.+++
T Consensus 38 l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~--- 110 (207)
T 1wy7_A 38 LLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVDKEAVDVLIENLGEFK---G-KFKVFIGDVSEFN--- 110 (207)
T ss_dssp HHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHTGGGT---T-SEEEEESCGGGCC---
T ss_pred HHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC---C-CEEEEECchHHcC---
Confidence 33333333345688999999999999999999887899999999999999987654332 2 7999999998863
Q ss_pred CCceeEEEEcccccccc
Q psy11730 358 HSKFDIILTSETIYSVA 374 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~~ 374 (496)
..||+|+++++++...
T Consensus 111 -~~~D~v~~~~p~~~~~ 126 (207)
T 1wy7_A 111 -SRVDIVIMNPPFGSQR 126 (207)
T ss_dssp -CCCSEEEECCCCSSSS
T ss_pred -CCCCEEEEcCCCcccc
Confidence 5899999999987764
No 90
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.06 E-value=9.5e-11 Score=115.14 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=79.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccccccc-CCCCceEEEecccCCcc---ccCCCceeEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNT-DNLEKCKFYHGDWGSLS---AVIHSKFDII 364 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~-~~~~~v~~~~~d~~~~~---~~~~~~fD~I 364 (496)
++.+|||||||+|.++..++..+. +|+|+|+|+.|++.|+++...... ....++.+..+|+.+++ .. .++||+|
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~fD~V 134 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPA-GDGFDAV 134 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCC-TTCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcccccc-CCCeEEE
Confidence 578999999999999999999876 899999999999999765322111 12357888999988876 32 6899999
Q ss_pred EEc-cccccccc-------hHhHhhee--eecCCC
Q psy11730 365 LTS-ETIYSVAN-------YNKLLTVW--CLFPTH 389 (496)
Q Consensus 365 i~~-~~l~~~~~-------~~~~~~~~--~l~p~~ 389 (496)
++. .+++|+.+ ...+++.. .|.|+|
T Consensus 135 ~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG 169 (293)
T 3thr_A 135 ICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGG 169 (293)
T ss_dssp EECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEE
T ss_pred EEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCe
Confidence 998 89999999 88888763 667765
No 91
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.05 E-value=3e-10 Score=105.56 Aligned_cols=108 Identities=21% Similarity=0.192 Sum_probs=81.5
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
.+....+++.+.... .++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.|+++....+ ..++++..+|+.
T Consensus 44 ~~~~~~~~~~l~~~~-~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~ 119 (205)
T 3grz_A 44 HQTTQLAMLGIERAM-VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNG---IYDIALQKTSLL 119 (205)
T ss_dssp HHHHHHHHHHHHHHC-SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCCCEEEESSTT
T ss_pred CccHHHHHHHHHHhc-cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEecccc
Confidence 444555666666543 3578999999999999999998877899999999999999987654332 334999999987
Q ss_pred CccccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+.. .++||+|+++.+++++ ..+++.. .|.|++
T Consensus 120 ~~~---~~~fD~i~~~~~~~~~---~~~l~~~~~~L~~gG 153 (205)
T 3grz_A 120 ADV---DGKFDLIVANILAEIL---LDLIPQLDSHLNEDG 153 (205)
T ss_dssp TTC---CSCEEEEEEESCHHHH---HHHGGGSGGGEEEEE
T ss_pred ccC---CCCceEEEECCcHHHH---HHHHHHHHHhcCCCC
Confidence 754 5899999999888764 4444432 455554
No 92
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.05 E-value=1.4e-10 Score=107.85 Aligned_cols=96 Identities=16% Similarity=0.130 Sum_probs=74.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||+|||+|.++..++.....+|+|+|+|+.|++.++++.... ..++++..+|+.+++.. +++||+|++..
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~~-~~~fD~v~~~~ 97 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVEDGYKTYGIEISDLQLKKAENFSREN----NFKLNISKGDIRKLPFK-DESMSFVYSYG 97 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHTTCEEEEEECCHHHHHHHHHHHHHH----TCCCCEEECCTTSCCSC-TTCEEEEEECS
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc----CCceEEEECchhhCCCC-CCceeEEEEcC
Confidence 47899999999999865544444468999999999999988764332 24688999999887643 57899999999
Q ss_pred ccccc--cchHhHhhee--eecCCC
Q psy11730 369 TIYSV--ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~--~~~~~~~~~~--~l~p~~ 389 (496)
+++|+ .+...+++.. .|.|+|
T Consensus 98 ~l~~~~~~~~~~~l~~~~~~LkpgG 122 (209)
T 2p8j_A 98 TIFHMRKNDVKEAIDEIKRVLKPGG 122 (209)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred hHHhCCHHHHHHHHHHHHHHcCCCc
Confidence 99999 6777777652 566655
No 93
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.05 E-value=1.8e-10 Score=110.18 Aligned_cols=95 Identities=14% Similarity=0.016 Sum_probs=77.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC----CCceeE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI----HSKFDI 363 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD~ 363 (496)
.++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++. ...+++++.+|+.+++... ...||+
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~------~~~~~~~~~~d~~~~~~~~~~~~~~~~d~ 127 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKEN------TAANISYRLLDGLVPEQAAQIHSEIGDAN 127 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHS------CCTTEEEEECCTTCHHHHHHHHHHHCSCE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhC------cccCceEEECcccccccccccccccCccE
Confidence 3577999999999999999999887 8999999999999988764 2348999999998865421 124999
Q ss_pred EEEcccccccc--chHhHhhee--eecCCC
Q psy11730 364 ILTSETIYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 364 Ii~~~~l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
|++..+++|++ +...+++.. .|.|++
T Consensus 128 v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 157 (245)
T 3ggd_A 128 IYMRTGFHHIPVEKRELLGQSLRILLGKQG 157 (245)
T ss_dssp EEEESSSTTSCGGGHHHHHHHHHHHHTTTC
T ss_pred EEEcchhhcCCHHHHHHHHHHHHHHcCCCC
Confidence 99999999998 777887763 566665
No 94
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.04 E-value=9.5e-11 Score=113.04 Aligned_cols=104 Identities=15% Similarity=0.134 Sum_probs=78.5
Q ss_pred CCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccC--------------C------------
Q psy11730 286 VAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD--------------N------------ 339 (496)
Q Consensus 286 ~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~--------------~------------ 339 (496)
...++.+|||||||+|.++..++..+..+|+|+|+|+.|++.++++....+.. .
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 34567899999999999999988887778999999999999987654221100 0
Q ss_pred CCce-EEEecccCCccccCC---CceeEEEEccccc----cccchHhHhhee--eecCCC
Q psy11730 340 LEKC-KFYHGDWGSLSAVIH---SKFDIILTSETIY----SVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 340 ~~~v-~~~~~d~~~~~~~~~---~~fD~Ii~~~~l~----~~~~~~~~~~~~--~l~p~~ 389 (496)
..++ .+..+|+.+...... ++||+|++..+++ +..++..+++.. .|.|+|
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 192 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGG 192 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCc
Confidence 0127 899999987654224 7899999999999 666777777662 566665
No 95
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.04 E-value=8.4e-11 Score=109.42 Aligned_cols=99 Identities=12% Similarity=0.071 Sum_probs=60.2
Q ss_pred cchHHHHHHHHhCCC--CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecc
Q psy11730 273 ECTFDLLNFIKDNVA--VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349 (496)
Q Consensus 273 ~~~~~l~~~l~~~~~--~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d 349 (496)
+.+..+++.+.+... .++.+|||+|||+|.++..+++.++ .+|+|+|+|+.|++.++++....+ . +++++++|
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d 87 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFG---A-VVDWAAAD 87 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-----------------------CCHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhC---C-ceEEEEcc
Confidence 445566666665543 4578999999999999999999875 589999999999999987654332 2 78889999
Q ss_pred cCCcccc---CCCceeEEEEccccccccc
Q psy11730 350 WGSLSAV---IHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 350 ~~~~~~~---~~~~fD~Ii~~~~l~~~~~ 375 (496)
+.+.... ..++||+|+++++++...+
T Consensus 88 ~~~~~~~~~~~~~~fD~i~~npp~~~~~~ 116 (215)
T 4dzr_A 88 GIEWLIERAERGRPWHAIVSNPPYIPTGE 116 (215)
T ss_dssp HHHHHHHHHHTTCCBSEEEECCCCCC---
T ss_pred hHhhhhhhhhccCcccEEEECCCCCCCcc
Confidence 8773221 1289999999999876544
No 96
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.04 E-value=2.5e-10 Score=104.02 Aligned_cols=107 Identities=16% Similarity=0.107 Sum_probs=78.0
Q ss_pred ecchHHHHHHHHhCCC--CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecc
Q psy11730 272 WECTFDLLNFIKDNVA--VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~--~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d 349 (496)
.+....+.+.+.+... .++.+|||+|||+|.+++.+++.+..+|+|+|+|+.|++.|+++....+ ...+++++.+|
T Consensus 25 rp~~~~~~~~~~~~l~~~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d 102 (187)
T 2fhp_A 25 RPTTDKVKESIFNMIGPYFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITK--EPEKFEVRKMD 102 (187)
T ss_dssp CCCCHHHHHHHHHHHCSCCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESC
T ss_pred CcCHHHHHHHHHHHHHhhcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhC--CCcceEEEECc
Confidence 3444455555554432 4688999999999999999888877899999999999999987654332 23579999999
Q ss_pred cCCcccc---CCCceeEEEEccccccccchHhHhh
Q psy11730 350 WGSLSAV---IHSKFDIILTSETIYSVANYNKLLT 381 (496)
Q Consensus 350 ~~~~~~~---~~~~fD~Ii~~~~l~~~~~~~~~~~ 381 (496)
+.+.... ..++||+|+++++++ ..+.+..++
T Consensus 103 ~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~ 136 (187)
T 2fhp_A 103 ANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLE 136 (187)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHH
Confidence 8874321 147899999998854 444444444
No 97
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.04 E-value=1.8e-10 Score=104.44 Aligned_cols=95 Identities=13% Similarity=0.158 Sum_probs=70.4
Q ss_pred hHHHHHHHHhCC--CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC
Q psy11730 275 TFDLLNFIKDNV--AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352 (496)
Q Consensus 275 ~~~l~~~l~~~~--~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~ 352 (496)
...+.+.+.+.. ..++.+|||+|||+|.+++.+++.+..+|+|+|+|+.|++.++++....+ ...+++++.+|+.+
T Consensus 15 ~~~~~~~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~ 92 (177)
T 2esr_A 15 SDKVRGAIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTK--AENRFTLLKMEAER 92 (177)
T ss_dssp ---CHHHHHHHHCSCCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTT--CGGGEEEECSCHHH
T ss_pred HHHHHHHHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcHHH
Confidence 333444444333 24678999999999999999998877899999999999999987653322 22479999999887
Q ss_pred ccccCCCceeEEEEccccc
Q psy11730 353 LSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 353 ~~~~~~~~fD~Ii~~~~l~ 371 (496)
......+.||+|+++++++
T Consensus 93 ~~~~~~~~fD~i~~~~~~~ 111 (177)
T 2esr_A 93 AIDCLTGRFDLVFLDPPYA 111 (177)
T ss_dssp HHHHBCSCEEEEEECCSSH
T ss_pred hHHhhcCCCCEEEECCCCC
Confidence 4332356799999998864
No 98
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.04 E-value=5.3e-11 Score=106.86 Aligned_cols=87 Identities=14% Similarity=0.123 Sum_probs=68.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---CCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI---HSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~fD~Ii 365 (496)
++.+|||+|||+|.++..+++.+.. |+|+|+|+.|++.++++....+ . +++++++|+.+..... .++||+|+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~-v~~vD~~~~~~~~a~~~~~~~~---~-~~~~~~~d~~~~~~~~~~~~~~~D~i~ 115 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE-AVLVEKDPEAVRLLKENVRRTG---L-GARVVALPVEVFLPEAKAQGERFTVAF 115 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE-EEEECCCHHHHHHHHHHHHHHT---C-CCEEECSCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHHcC---C-ceEEEeccHHHHHHhhhccCCceEEEE
Confidence 6789999999999999999998876 9999999999999987654332 2 7999999988743211 24799999
Q ss_pred EccccccccchHhHhhe
Q psy11730 366 TSETIYSVANYNKLLTV 382 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~ 382 (496)
++++++ .+.+.+++.
T Consensus 116 ~~~~~~--~~~~~~~~~ 130 (171)
T 1ws6_A 116 MAPPYA--MDLAALFGE 130 (171)
T ss_dssp ECCCTT--SCTTHHHHH
T ss_pred ECCCCc--hhHHHHHHH
Confidence 998876 444454443
No 99
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.03 E-value=1.4e-10 Score=115.05 Aligned_cols=102 Identities=17% Similarity=0.088 Sum_probs=72.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCC---CCceEEEeccc------CCccc-cCC
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDN---LEKCKFYHGDW------GSLSA-VIH 358 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~---~~~v~~~~~d~------~~~~~-~~~ 358 (496)
.+.+|||||||+|..+..++..+..+|+|+|+|+.|++.|+++....+... .-+++|...|+ +++.. ..+
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 478999999999987777777777899999999999999998754322100 01367778777 33321 125
Q ss_pred CceeEEEEccccccc---cchHhHhhe--eeecCCCC
Q psy11730 359 SKFDIILTSETIYSV---ANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~---~~~~~~~~~--~~l~p~~~ 390 (496)
++||+|+|..++|++ .+...++++ ..|.|+|.
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~ 164 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGK 164 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEE
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCE
Confidence 799999999999875 345666665 36777763
No 100
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.03 E-value=2.9e-10 Score=110.51 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=76.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-C-CeEEEEeCCHH------HHHHhcCcccccccCCCCceEEEecc-c--CCcccc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-A-AHVSFQDYNQE------VIESLTLPNILMNTDNLEKCKFYHGD-W--GSLSAV 356 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~-~~v~giD~s~~------~i~~a~~~~~~~~~~~~~~v~~~~~d-~--~~~~~~ 356 (496)
.++.+|||||||+|.++..+++.+ + .+|+|+|+|+. |++.++++....+ ...++++..+| + ..++..
T Consensus 42 ~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~ 119 (275)
T 3bkx_A 42 KPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGP--LGDRLTVHFNTNLSDDLGPIA 119 (275)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTST--TGGGEEEECSCCTTTCCGGGT
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcC--CCCceEEEECChhhhccCCCC
Confidence 457899999999999999999874 5 79999999997 8888877643221 23589999998 3 333322
Q ss_pred CCCceeEEEEccccccccchHhHhhee-eecCCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYNKLLTVW-CLFPTHT 390 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~~~~~~~-~l~p~~~ 390 (496)
+++||+|++..+++|+++...+++.. .+.++++
T Consensus 120 -~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG 153 (275)
T 3bkx_A 120 -DQHFDRVVLAHSLWYFASANALALLFKNMAAVCD 153 (275)
T ss_dssp -TCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCS
T ss_pred -CCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCC
Confidence 57899999999999999988866552 5556444
No 101
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.03 E-value=7.7e-10 Score=102.76 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=74.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.+++.++++....+ ..+++++.+|+.+.... ...||+|++
T Consensus 39 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~-~~~~D~i~~ 114 (204)
T 3e05_A 39 QDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFV---ARNVTLVEAFAPEGLDD-LPDPDRVFI 114 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHT---CTTEEEEECCTTTTCTT-SCCCSEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhC---CCcEEEEeCChhhhhhc-CCCCCEEEE
Confidence 3578999999999999999999875 799999999999999987654332 36899999998765433 367999999
Q ss_pred ccccccccchHhHhhee--eecCCC
Q psy11730 367 SETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
..+++ +...+++.. .|.|++
T Consensus 115 ~~~~~---~~~~~l~~~~~~LkpgG 136 (204)
T 3e05_A 115 GGSGG---MLEEIIDAVDRRLKSEG 136 (204)
T ss_dssp SCCTT---CHHHHHHHHHHHCCTTC
T ss_pred CCCCc---CHHHHHHHHHHhcCCCe
Confidence 98876 555666552 456655
No 102
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.03 E-value=1.4e-10 Score=105.95 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=67.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
...+|||||||+|.+++.++...+ .+|+|+|+|+.|++.++++....+ ...++.+ .|..... +.+.||+|++.
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g--~~~~v~~--~d~~~~~--~~~~~DvVLa~ 122 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLK--TTIKYRF--LNKESDV--YKGTYDVVFLL 122 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSC--CSSEEEE--ECCHHHH--TTSEEEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcC--CCccEEE--ecccccC--CCCCcChhhHh
Confidence 477999999999999999987744 599999999999999998764433 1225666 5554432 26889999999
Q ss_pred cccccccchHhHhh
Q psy11730 368 ETIYSVANYNKLLT 381 (496)
Q Consensus 368 ~~l~~~~~~~~~~~ 381 (496)
.++|++++.+..+.
T Consensus 123 k~LHlL~~~~~al~ 136 (200)
T 3fzg_A 123 KMLPVLKQQDVNIL 136 (200)
T ss_dssp TCHHHHHHTTCCHH
T ss_pred hHHHhhhhhHHHHH
Confidence 99999966555443
No 103
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.02 E-value=5e-10 Score=102.24 Aligned_cols=105 Identities=21% Similarity=0.308 Sum_probs=78.8
Q ss_pred HHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCc--eEEEecccCCccc
Q psy11730 279 LNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEK--CKFYHGDWGSLSA 355 (496)
Q Consensus 279 ~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~--v~~~~~d~~~~~~ 355 (496)
.+.+.+... .++.+|||+|||+|.++..+++. ..+|+|+|+|+.+++.++++....+ ..+ +++..+|+.+...
T Consensus 41 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~---~~~~~~~~~~~d~~~~~~ 116 (194)
T 1dus_A 41 TKILVENVVVDKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNN---LDNYDIRVVHSDLYENVK 116 (194)
T ss_dssp HHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTT---CTTSCEEEEECSTTTTCT
T ss_pred HHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcC---CCccceEEEECchhcccc
Confidence 333443333 35789999999999999998888 6799999999999999887653322 344 9999999887443
Q ss_pred cCCCceeEEEEcccccc-ccchHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYS-VANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~-~~~~~~~~~~~--~l~p~~ 389 (496)
.+.||+|+++.++++ ..+...+++.. .|.|++
T Consensus 117 --~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG 151 (194)
T 1dus_A 117 --DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNG 151 (194)
T ss_dssp --TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEE
T ss_pred --cCCceEEEECCCcccchhHHHHHHHHHHHHcCCCC
Confidence 578999999999887 45666666652 555654
No 104
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.02 E-value=4.3e-10 Score=106.65 Aligned_cols=101 Identities=14% Similarity=0.227 Sum_probs=78.1
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.+.+++.... .++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++. .++.+..+|+.+++.
T Consensus 29 ~~~~~l~~~~-~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~- 97 (239)
T 3bxo_A 29 DIADLVRSRT-PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRL--------PDATLHQGDMRDFRL- 97 (239)
T ss_dssp HHHHHHHHHC-TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHC--------TTCEEEECCTTTCCC-
T ss_pred HHHHHHHHhc-CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhC--------CCCEEEECCHHHccc-
Confidence 3455555544 4678999999999999999998876 8999999999999988643 468999999988765
Q ss_pred CCCceeEEEE-cccccccc---chHhHhhee--eecCCC
Q psy11730 357 IHSKFDIILT-SETIYSVA---NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~-~~~l~~~~---~~~~~~~~~--~l~p~~ 389 (496)
.++||+|+| ..+++|+. +...+++.. .|.|++
T Consensus 98 -~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 135 (239)
T 3bxo_A 98 -GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGG 135 (239)
T ss_dssp -SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEE
T ss_pred -CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 678999996 55999984 445555542 455554
No 105
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.02 E-value=3e-10 Score=116.24 Aligned_cols=112 Identities=24% Similarity=0.218 Sum_probs=86.7
Q ss_pred ecchHHHHHHHHhCC---CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEec
Q psy11730 272 WECTFDLLNFIKDNV---AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHG 348 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~---~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~ 348 (496)
.+.+..+++.+.+.. ..++.+|||||||+|.+++.+++.+. +|+|+|+|+.+++.++++...++ .+++++.+
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~----~~v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANA----LKAQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTT----CCCEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcC----CCeEEEEc
Confidence 344556777776543 35688999999999999999998864 89999999999999987754332 24899999
Q ss_pred ccCCccccCCCceeEEEEcccccc-----ccchHhHhhe--eeecCCC
Q psy11730 349 DWGSLSAVIHSKFDIILTSETIYS-----VANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 349 d~~~~~~~~~~~fD~Ii~~~~l~~-----~~~~~~~~~~--~~l~p~~ 389 (496)
|+.+.... .++||+|++++++++ ..+...+++. ..|.|++
T Consensus 288 D~~~~~~~-~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG 334 (381)
T 3dmg_A 288 DVDEALTE-EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGG 334 (381)
T ss_dssp STTTTSCT-TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEE
T ss_pred chhhcccc-CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCc
Confidence 99887653 479999999999998 5566677665 2566665
No 106
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.01 E-value=5.2e-10 Score=108.11 Aligned_cols=100 Identities=21% Similarity=0.337 Sum_probs=78.0
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
+.+++..... ++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++.. . .+..+|+.+++..
T Consensus 44 ~~~~l~~~~~-~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~-------~--~~~~~d~~~~~~~- 111 (260)
T 2avn_A 44 IGSFLEEYLK-NPCRVLDLGGGTGKWSLFLQERG-FEVVLVDPSKEMLEVAREKGV-------K--NVVEAKAEDLPFP- 111 (260)
T ss_dssp HHHHHHHHCC-SCCEEEEETCTTCHHHHHHHTTT-CEEEEEESCHHHHHHHHHHTC-------S--CEEECCTTSCCSC-
T ss_pred HHHHHHHhcC-CCCeEEEeCCCcCHHHHHHHHcC-CeEEEEeCCHHHHHHHHhhcC-------C--CEEECcHHHCCCC-
Confidence 4455555444 77899999999999999998875 489999999999999886542 1 2788998887643
Q ss_pred CCceeEEEEccccccc-cchHhHhhee--eecCCC
Q psy11730 358 HSKFDIILTSETIYSV-ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~-~~~~~~~~~~--~l~p~~ 389 (496)
+++||+|++..+++|+ +++..++++. .|.|+|
T Consensus 112 ~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG 146 (260)
T 2avn_A 112 SGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDG 146 (260)
T ss_dssp TTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEE
T ss_pred CCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCe
Confidence 6789999998877666 7788887763 566665
No 107
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.01 E-value=4.2e-10 Score=107.05 Aligned_cols=95 Identities=19% Similarity=0.133 Sum_probs=76.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++....+ .++.+..+|+.+++. .++||+|++.
T Consensus 36 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~--~~~fD~v~~~ 108 (246)
T 1y8c_A 36 LVFDDYLDLACGTGNLTENLCPKF-KNTWAVDLSQEMLSEAENKFRSQG----LKPRLACQDISNLNI--NRKFDLITCC 108 (246)
T ss_dssp CCTTEEEEETCTTSTTHHHHGGGS-SEEEEECSCHHHHHHHHHHHHHTT----CCCEEECCCGGGCCC--SCCEEEEEEC
T ss_pred CCCCeEEEeCCCCCHHHHHHHHCC-CcEEEEECCHHHHHHHHHHHhhcC----CCeEEEecccccCCc--cCCceEEEEc
Confidence 367899999999999999988886 579999999999999987653321 278999999988765 3789999999
Q ss_pred c-ccccc---cchHhHhhee--eecCCC
Q psy11730 368 E-TIYSV---ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~-~l~~~---~~~~~~~~~~--~l~p~~ 389 (496)
. +++|+ .+...+++.. .|.|++
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG 136 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGG 136 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEE
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCc
Confidence 8 99999 6667777652 556654
No 108
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.00 E-value=2.7e-10 Score=115.29 Aligned_cols=116 Identities=19% Similarity=0.284 Sum_probs=84.2
Q ss_pred CCccccceeecccccCCCccccCceeeecchHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHH
Q psy11730 245 PLFEYETFVNISHTDLKPNVYEGGYKIWECTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQE 323 (496)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~ 323 (496)
.+|+.+.....+..|+.+..+ .....+.|.+... .++++|||||||+|.+++.+++.+..+|+|+|+|+
T Consensus 14 ~y~~~y~~~~~~~~ml~d~~r---------~~~y~~~i~~~l~~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~- 83 (348)
T 2y1w_A 14 QYFQFYGYLSQQQNMMQDYVR---------TGTYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST- 83 (348)
T ss_dssp HHHHHHTCHHHHHHHHTCHHH---------HHHHHHHHHHTGGGTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-
T ss_pred HHHHHHhhhhHHHHHhcchHH---------HHHHHHHHHhccccCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-
Confidence 355555555566666666432 2222344444433 46889999999999999999998888999999996
Q ss_pred HHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcccccccc
Q psy11730 324 VIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 324 ~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~ 374 (496)
|++.|+++.... +...+++++.+|+++++. .++||+|++..+++|+.
T Consensus 84 ~~~~a~~~~~~~--~l~~~v~~~~~d~~~~~~--~~~~D~Ivs~~~~~~~~ 130 (348)
T 2y1w_A 84 MAQHAEVLVKSN--NLTDRIVVIPGKVEEVSL--PEQVDIIISEPMGYMLF 130 (348)
T ss_dssp HHHHHHHHHHHT--TCTTTEEEEESCTTTCCC--SSCEEEEEECCCBTTBT
T ss_pred HHHHHHHHHHHc--CCCCcEEEEEcchhhCCC--CCceeEEEEeCchhcCC
Confidence 888777654322 233689999999998764 46899999999988874
No 109
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.00 E-value=4.1e-10 Score=122.71 Aligned_cols=100 Identities=17% Similarity=0.146 Sum_probs=79.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCccccc-c--cCCCCceEEEecccCCccccCCCcee
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILM-N--TDNLEKCKFYHGDWGSLSAVIHSKFD 362 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~-~--~~~~~~v~~~~~d~~~~~~~~~~~fD 362 (496)
.++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.|+++.... + .....+++|+++|+.+++.. .++||
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~-d~sFD 798 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR-LHDVD 798 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT-SCSCC
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc-cCCee
Confidence 3688999999999999999999884 79999999999999998743211 1 12356899999999998764 58999
Q ss_pred EEEEccccccccchHh--Hhhe--eeecCC
Q psy11730 363 IILTSETIYSVANYNK--LLTV--WCLFPT 388 (496)
Q Consensus 363 ~Ii~~~~l~~~~~~~~--~~~~--~~l~p~ 388 (496)
+|++..+++|+++... +++. ..|.|+
T Consensus 799 lVV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 799 IGTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred EEEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 9999999999987663 5544 245554
No 110
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.00 E-value=1.5e-09 Score=101.07 Aligned_cols=94 Identities=15% Similarity=0.135 Sum_probs=74.5
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+...+.+... .++.+|||||||+|.++..+++. ..+|+|+|+|+.+++.++++....+ ..++++..+|+.+...
T Consensus 64 ~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~ 139 (210)
T 3lbf_A 64 YMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLD---LHNVSTRHGDGWQGWQ 139 (210)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcC---CCceEEEECCcccCCc
Confidence 34444444443 45789999999999999999988 5789999999999999987654322 4479999999887554
Q ss_pred cCCCceeEEEEccccccccc
Q psy11730 356 VIHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~ 375 (496)
. .++||+|++..+++++.+
T Consensus 140 ~-~~~~D~i~~~~~~~~~~~ 158 (210)
T 3lbf_A 140 A-RAPFDAIIVTAAPPEIPT 158 (210)
T ss_dssp G-GCCEEEEEESSBCSSCCT
T ss_pred c-CCCccEEEEccchhhhhH
Confidence 3 578999999999998865
No 111
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.99 E-value=1.1e-09 Score=102.74 Aligned_cols=97 Identities=19% Similarity=0.227 Sum_probs=76.7
Q ss_pred HHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc-cCCCc
Q psy11730 282 IKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIHSK 360 (496)
Q Consensus 282 l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~ 360 (496)
+.+....++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++. ..+..+|+.+... ..+++
T Consensus 25 l~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~----------~~~~~~d~~~~~~~~~~~~ 93 (230)
T 3cc8_A 25 LLKHIKKEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL----------DHVVLGDIETMDMPYEEEQ 93 (230)
T ss_dssp HHTTCCTTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS----------SEEEESCTTTCCCCSCTTC
T ss_pred HHHHhccCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC----------CcEEEcchhhcCCCCCCCc
Confidence 333333467899999999999999999885 89999999999999988653 2578888876422 22578
Q ss_pred eeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 361 FDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 361 fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
||+|++..+++|++++..+++.. .+.|++
T Consensus 94 fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG 124 (230)
T 3cc8_A 94 FDCVIFGDVLEHLFDPWAVIEKVKPYIKQNG 124 (230)
T ss_dssp EEEEEEESCGGGSSCHHHHHHHTGGGEEEEE
T ss_pred cCEEEECChhhhcCCHHHHHHHHHHHcCCCC
Confidence 99999999999999998888763 555554
No 112
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.99 E-value=5.3e-10 Score=105.82 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=72.1
Q ss_pred HHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC-Ccc
Q psy11730 276 FDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG-SLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~-~~~ 354 (496)
..++..+......++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++ ..+++++.+|+. .++
T Consensus 35 ~~l~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~--------~~~~~~~~~d~~~~~~ 105 (226)
T 3m33_A 35 ELTFDLWLSRLLTPQTRVLEAGCGHGPDAARFGPQA-ARWAAYDFSPELLKLARAN--------APHADVYEWNGKGELP 105 (226)
T ss_dssp THHHHHHHHHHCCTTCEEEEESCTTSHHHHHHGGGS-SEEEEEESCHHHHHHHHHH--------CTTSEEEECCSCSSCC
T ss_pred HHHHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHcC-CEEEEEECCHHHHHHHHHh--------CCCceEEEcchhhccC
Confidence 344444443333468899999999999999998885 5899999999999998865 347899999995 444
Q ss_pred ccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 355 AVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
...+++||+|+++ .++..+++.. .|.|++
T Consensus 106 ~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG 136 (226)
T 3m33_A 106 AGLGAPFGLIVSR------RGPTSVILRLPELAAPDA 136 (226)
T ss_dssp TTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEE
T ss_pred CcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCc
Confidence 3325799999997 2444444442 455654
No 113
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.99 E-value=2.4e-10 Score=113.26 Aligned_cols=98 Identities=15% Similarity=0.047 Sum_probs=78.0
Q ss_pred CCCCeEEEecCcCCHHHHHHH--HccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTL--MNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la--~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||||||+|.++..++ .....+|+|+|+|+.+++.++++....+ ...+++++.+|+.+++. .++||+|+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~fD~v~ 192 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHA--LAGQITLHRQDAWKLDT--REGYDLLT 192 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEECCGGGCCC--CSCEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcC--CCCceEEEECchhcCCc--cCCeEEEE
Confidence 357899999999999999985 3344799999999999999987653322 23469999999998775 38999999
Q ss_pred EccccccccchHh---Hhhe--eeecCCC
Q psy11730 366 TSETIYSVANYNK---LLTV--WCLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~---~~~~--~~l~p~~ 389 (496)
++.+++|+++... +++. ..|.|+|
T Consensus 193 ~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 221 (305)
T 3ocj_A 193 SNGLNIYEPDDARVTELYRRFWQALKPGG 221 (305)
T ss_dssp CCSSGGGCCCHHHHHHHHHHHHHHEEEEE
T ss_pred ECChhhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 9999999988876 4554 2566665
No 114
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.99 E-value=8.5e-10 Score=103.41 Aligned_cols=81 Identities=14% Similarity=0.051 Sum_probs=66.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc-cCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~Ii~ 366 (496)
++.+|||||||+|.++..+++..+ .+|+|+|+|+.+++.|+++....+ ..++.++.+|+.+++. ...++||+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVG---VPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHC---CSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcC---CCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 577999999999999999998875 699999999999999987654332 3689999999998652 22578999999
Q ss_pred cccccc
Q psy11730 367 SETIYS 372 (496)
Q Consensus 367 ~~~l~~ 372 (496)
+.+..+
T Consensus 118 ~~~~~~ 123 (214)
T 1yzh_A 118 NFSDPW 123 (214)
T ss_dssp ESCCCC
T ss_pred ECCCCc
Confidence 877544
No 115
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.98 E-value=5.6e-10 Score=109.33 Aligned_cols=95 Identities=19% Similarity=0.092 Sum_probs=74.2
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||+|||+|.+++.+++.+..+|+|+|+|+.|++.|+++...++ ...+++++++|+.++.. .++||+|++++
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~--~~~~v~~~~~D~~~~~~--~~~fD~Vi~~~ 200 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK--VEDRMSAYNMDNRDFPG--ENIADRILMGY 200 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCTTTCCC--CSCEEEEEECC
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECCHHHhcc--cCCccEEEECC
Confidence 488999999999999999999888789999999999999987654333 23459999999998876 67999999988
Q ss_pred ccccccchHhHhheeeecCCC
Q psy11730 369 TIYSVANYNKLLTVWCLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~~~~~~~~~l~p~~ 389 (496)
+.....-...+.+ .|.|+|
T Consensus 201 p~~~~~~l~~~~~--~LkpgG 219 (278)
T 2frn_A 201 VVRTHEFIPKALS--IAKDGA 219 (278)
T ss_dssp CSSGGGGHHHHHH--HEEEEE
T ss_pred chhHHHHHHHHHH--HCCCCe
Confidence 7544333333333 455654
No 116
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.97 E-value=1.4e-09 Score=101.54 Aligned_cols=93 Identities=12% Similarity=0.033 Sum_probs=70.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.+++.+++. ..+|+|+|+|++|++.|+++....+ ...+++++.+|+.+.... ...||+|++.
T Consensus 54 ~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~~-~~~~D~v~~~ 129 (204)
T 3njr_A 54 RRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYG--LSPRMRAVQGTAPAALAD-LPLPEAVFIG 129 (204)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCTTGGGTT-SCCCSEEEEC
T ss_pred CCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcC--CCCCEEEEeCchhhhccc-CCCCCEEEEC
Confidence 35789999999999999999988 6789999999999999987654332 223899999999884332 3579999998
Q ss_pred cccccccchHhHhhee--eecCCC
Q psy11730 368 ETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
..+ +.+ +++.. .|.|++
T Consensus 130 ~~~----~~~-~l~~~~~~LkpgG 148 (204)
T 3njr_A 130 GGG----SQA-LYDRLWEWLAPGT 148 (204)
T ss_dssp SCC----CHH-HHHHHHHHSCTTC
T ss_pred Ccc----cHH-HHHHHHHhcCCCc
Confidence 755 333 55442 456655
No 117
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.97 E-value=7.9e-10 Score=108.37 Aligned_cols=94 Identities=10% Similarity=0.054 Sum_probs=73.6
Q ss_pred CCCCeEEEecCcCCHHH-HHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCGAGLLG-LYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~-~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.++.+|||||||+|.++ +.+++....+|+|+|+|++|++.|+++....+ . .+++|+.+|+.+++ +++||+|++
T Consensus 121 ~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~g--l-~~v~~v~gDa~~l~---d~~FDvV~~ 194 (298)
T 3fpf_A 121 RRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLG--V-DGVNVITGDETVID---GLEFDVLMV 194 (298)
T ss_dssp CTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHT--C-CSEEEEESCGGGGG---GCCCSEEEE
T ss_pred CCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcC--C-CCeEEEECchhhCC---CCCcCEEEE
Confidence 35889999999998665 55566556799999999999999998764433 2 78999999998875 589999998
Q ss_pred ccccccccchHhHhhee--eecCCCC
Q psy11730 367 SETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
... .++.+.+++++ .|.|++.
T Consensus 195 ~a~---~~d~~~~l~el~r~LkPGG~ 217 (298)
T 3fpf_A 195 AAL---AEPKRRVFRNIHRYVDTETR 217 (298)
T ss_dssp CTT---CSCHHHHHHHHHHHCCTTCE
T ss_pred CCC---ccCHHHHHHHHHHHcCCCcE
Confidence 655 46777777763 6677663
No 118
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.97 E-value=2.9e-10 Score=111.96 Aligned_cols=100 Identities=19% Similarity=0.209 Sum_probs=71.1
Q ss_pred CCCeEEEecCcCCHHHHHH----HHccC-Ce--EEEEeCCHHHHHHhcCcccccccCCCCceE--EEecccCCccc----
Q psy11730 289 DKLSVLDVGCGAGLLGLYT----LMNGA-AH--VSFQDYNQEVIESLTLPNILMNTDNLEKCK--FYHGDWGSLSA---- 355 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~l----a~~~~-~~--v~giD~s~~~i~~a~~~~~~~~~~~~~~v~--~~~~d~~~~~~---- 355 (496)
++.+|||||||+|.++..+ +..++ .. ++|+|+|++|++.|+++..... ...++. +..++.+++..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTS--NLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCS--SCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhcc--CCCcceEEEEecchhhhhhhhcc
Confidence 4669999999999876543 33322 43 4999999999999887653211 233444 44556655431
Q ss_pred -cCCCceeEEEEccccccccchHhHhhee--eecCCCC
Q psy11730 356 -VIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 356 -~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~~ 390 (496)
..+++||+|++..+++|++|++.++++. +|.|+|.
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAK 167 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcE
Confidence 1267899999999999999999999873 7788764
No 119
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.97 E-value=1.1e-09 Score=104.88 Aligned_cols=95 Identities=24% Similarity=0.271 Sum_probs=72.2
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++.... ..++.++.+|+.+++. .++||+|++.
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~--~~~fD~v~~~ 112 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAERG-YEVVGLDLHEEMLRVARRKAKER----NLKIEFLQGDVLEIAF--KNEFDAVTMF 112 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHT----TCCCEEEESCGGGCCC--CSCEEEEEEC
T ss_pred cCCCEEEEeCCCCCHHHHHHHHCC-CeEEEEECCHHHHHHHHHHHHhc----CCceEEEECChhhccc--CCCccEEEEc
Confidence 457899999999999999999886 48999999999999998765332 2368999999988764 4789999986
Q ss_pred c-ccccc--cchHhHhhee--eecCCC
Q psy11730 368 E-TIYSV--ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~-~l~~~--~~~~~~~~~~--~l~p~~ 389 (496)
. .++++ .+...+++.. .|.|+|
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG 139 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGG 139 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCe
Confidence 4 34443 3455666542 566655
No 120
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.97 E-value=4.2e-10 Score=105.53 Aligned_cols=91 Identities=19% Similarity=0.272 Sum_probs=73.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc---cccCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL---SAVIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~I 364 (496)
..+.+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++ .++.+..+++.++ +.....+||+|
T Consensus 51 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~---------~~~~~~~~~~~~~~~~~~~~~~~fD~v 120 (227)
T 3e8s_A 51 RQPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA---------GAGEVHLASYAQLAEAKVPVGKDYDLI 120 (227)
T ss_dssp TCCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT---------CSSCEEECCHHHHHTTCSCCCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh---------cccccchhhHHhhcccccccCCCccEE
Confidence 3578999999999999999988854 899999999999998865 3567788887776 33334569999
Q ss_pred EEccccccccchHhHhhee--eecCCC
Q psy11730 365 LTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
++..+++ ..++..+++.. .|.|++
T Consensus 121 ~~~~~l~-~~~~~~~l~~~~~~L~pgG 146 (227)
T 3e8s_A 121 CANFALL-HQDIIELLSAMRTLLVPGG 146 (227)
T ss_dssp EEESCCC-SSCCHHHHHHHHHTEEEEE
T ss_pred EECchhh-hhhHHHHHHHHHHHhCCCe
Confidence 9999999 78888888763 566655
No 121
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.97 E-value=2.1e-10 Score=113.23 Aligned_cols=109 Identities=17% Similarity=0.220 Sum_probs=79.1
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
.+..+.......+.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.|+++....+.....+++++.+|+.+++.
T Consensus 71 ~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-- 147 (299)
T 3g2m_A 71 EAREFATRTGPVSGPVLELAAGMGRLTFPFLDLG-WEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-- 147 (299)
T ss_dssp HHHHHHHHHCCCCSCEEEETCTTTTTHHHHHTTT-CCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC--
T ss_pred HHHHHHHhhCCCCCcEEEEeccCCHHHHHHHHcC-CeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc--
Confidence 3344444444456699999999999999999886 5799999999999999876533211011579999999998775
Q ss_pred CCceeEEEEc-ccccccc--chHhHhhee--eecCCC
Q psy11730 358 HSKFDIILTS-ETIYSVA--NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~-~~l~~~~--~~~~~~~~~--~l~p~~ 389 (496)
.++||+|++. .++++++ +...+++.. .|.|++
T Consensus 148 ~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 184 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGG 184 (299)
T ss_dssp SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEE
T ss_pred CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCc
Confidence 6899999965 6666664 345666552 566665
No 122
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.96 E-value=2.2e-09 Score=100.60 Aligned_cols=124 Identities=16% Similarity=0.049 Sum_probs=78.6
Q ss_pred CCCccccC----ceeeecchH-HHHHHHHhC--CCC-CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcC
Q psy11730 260 LKPNVYEG----GYKIWECTF-DLLNFIKDN--VAV-DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 260 ~~~~~~~~----~~~~~~~~~-~l~~~l~~~--~~~-~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~ 330 (496)
+.+.+|.. .|..|.... .+...+... ..+ ++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.+.+
T Consensus 20 ~~~~~Y~~~~~~~y~~~~~~~~~l~~~~~~~l~~~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~ 99 (210)
T 1nt2_A 20 KYGSHYGEKVFDGYREWVPWRSKLAAMILKGHRLKLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLE 99 (210)
T ss_dssp SCCCSSSCCEETTEEECCGGGCHHHHHHHTSCCCCCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHH
T ss_pred CCccccchhhhhhhhhcChhHHHHHHHHHhhcccCCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHH
Confidence 33355555 677775532 344444443 233 47799999999999999998865 3689999999998765443
Q ss_pred cccccccCCCCceEEEecccCCccc--cCCCceeEEEEccccccccchHhHhhe--eeecCCCC
Q psy11730 331 PNILMNTDNLEKCKFYHGDWGSLSA--VIHSKFDIILTSETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 331 ~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
.+.. ..++.++.+|+..... ...++||+|+++.. +......++++ ..|.|+|.
T Consensus 100 ~a~~-----~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~~--~~~~~~~~l~~~~r~LkpgG~ 156 (210)
T 1nt2_A 100 LVRE-----RNNIIPLLFDASKPWKYSGIVEKVDLIYQDIA--QKNQIEILKANAEFFLKEKGE 156 (210)
T ss_dssp HHHH-----CSSEEEECSCTTCGGGTTTTCCCEEEEEECCC--STTHHHHHHHHHHHHEEEEEE
T ss_pred HHhc-----CCCeEEEEcCCCCchhhcccccceeEEEEecc--ChhHHHHHHHHHHHHhCCCCE
Confidence 3211 2468888888876421 11478999999832 22223333443 26777664
No 123
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.95 E-value=3.3e-10 Score=111.33 Aligned_cols=103 Identities=13% Similarity=0.098 Sum_probs=73.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccc---------------cCC------------C
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMN---------------TDN------------L 340 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~---------------~~~------------~ 340 (496)
.++.+|||||||+|.++..++..+..+|+|+|+|+.|++.|+++..... .+. .
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 4678999999999997666555556799999999999998876432110 000 0
Q ss_pred CceEEEecccCC-cccc----CCCceeEEEEcccccc----ccchHhHhhee--eecCCCC
Q psy11730 341 EKCKFYHGDWGS-LSAV----IHSKFDIILTSETIYS----VANYNKLLTVW--CLFPTHT 390 (496)
Q Consensus 341 ~~v~~~~~d~~~-~~~~----~~~~fD~Ii~~~~l~~----~~~~~~~~~~~--~l~p~~~ 390 (496)
..+.++.+|+.+ ++.. ..++||+|+++.++++ ++++..+++++ .|.|+|.
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~ 210 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGH 210 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCE
Confidence 125677778877 4321 2457999999999999 67888888763 6777763
No 124
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.95 E-value=4.8e-10 Score=107.17 Aligned_cols=94 Identities=22% Similarity=0.264 Sum_probs=72.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Ii 365 (496)
++.+|||||||+|.+++.++... ..+|+|+|+|+.|++.++++....+ ..+++++++|+++++.. ..++||+|+
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~~fD~V~ 146 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQ---LENTTFCHDRAETFGQRKDVRESYDIVT 146 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEESCHHHHTTCTTTTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEeccHHHhcccccccCCccEEE
Confidence 57899999999999999998754 4789999999999999987654332 34799999999887642 247899999
Q ss_pred EccccccccchHhHhhee--eecCCC
Q psy11730 366 TSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+.. +.++..+++.. .|.|+|
T Consensus 147 ~~~----~~~~~~~l~~~~~~LkpgG 168 (240)
T 1xdz_A 147 ARA----VARLSVLSELCLPLVKKNG 168 (240)
T ss_dssp EEC----CSCHHHHHHHHGGGEEEEE
T ss_pred Eec----cCCHHHHHHHHHHhcCCCC
Confidence 976 35666766652 566655
No 125
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.95 E-value=7.4e-10 Score=110.14 Aligned_cols=101 Identities=18% Similarity=0.107 Sum_probs=77.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccccccc----CCCCceEEEecccCCcc----cc-CCC
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNT----DNLEKCKFYHGDWGSLS----AV-IHS 359 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~----~~~~~v~~~~~d~~~~~----~~-~~~ 359 (496)
++.+|||||||+|.++..+++.+..+|+|+|+|+.|++.++++...... ....+++++.+|+++++ .. ..+
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 5779999999999999999887778999999999999998876532210 02347999999999875 22 135
Q ss_pred ceeEEEEccccccc-c---chHhHhhee--eecCCC
Q psy11730 360 KFDIILTSETIYSV-A---NYNKLLTVW--CLFPTH 389 (496)
Q Consensus 360 ~fD~Ii~~~~l~~~-~---~~~~~~~~~--~l~p~~ 389 (496)
+||+|++..+++++ . +...+++.+ .|.|+|
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG 149 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGG 149 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEE
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCc
Confidence 89999999999987 3 345666653 566665
No 126
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.95 E-value=1e-09 Score=104.35 Aligned_cols=103 Identities=17% Similarity=0.220 Sum_probs=78.2
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
..+++..... ++.+|||||||+|.++..+++. .+|+|+|+|+.|++.++++.... ..++++..+|+.+++.
T Consensus 23 ~~~~~~~~~~-~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~----~~~~~~~~~d~~~~~~-- 93 (243)
T 3d2l_A 23 WVAWVLEQVE-PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMET----NRHVDFWVQDMRELEL-- 93 (243)
T ss_dssp HHHHHHHHSC-TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHT----TCCCEEEECCGGGCCC--
T ss_pred HHHHHHHHcC-CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhc----CCceEEEEcChhhcCC--
Confidence 3444544432 4689999999999999998877 78999999999999998765322 2578999999988764
Q ss_pred CCceeEEEEcc-ccccc---cchHhHhhee--eecCCC
Q psy11730 358 HSKFDIILTSE-TIYSV---ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~~-~l~~~---~~~~~~~~~~--~l~p~~ 389 (496)
.++||+|++.. +++|+ .+...+++.. .|.|++
T Consensus 94 ~~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG 131 (243)
T 3d2l_A 94 PEPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGG 131 (243)
T ss_dssp SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEE
T ss_pred CCCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCe
Confidence 47899999986 99998 4555566542 566655
No 127
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.95 E-value=5.3e-10 Score=105.56 Aligned_cols=80 Identities=8% Similarity=-0.024 Sum_probs=65.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc--cCCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA--VIHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~~~~~fD~Ii 365 (496)
.+.+|||||||+|.++..+|+..+ ..|+|||+|+.|++.|+++.... ...|+.++.+|+.++.. ..+++||.|+
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~---~l~nv~~~~~Da~~~l~~~~~~~~~d~v~ 110 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEE---GLSNLRVMCHDAVEVLHKMIPDNSLRMVQ 110 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHT---TCSSEEEECSCHHHHHHHHSCTTCEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHh---CCCcEEEEECCHHHHHHHHcCCCChheEE
Confidence 567999999999999999998876 68999999999999988765332 35689999999887522 2368999999
Q ss_pred Eccccc
Q psy11730 366 TSETIY 371 (496)
Q Consensus 366 ~~~~l~ 371 (496)
++.+..
T Consensus 111 ~~~~~p 116 (218)
T 3dxy_A 111 LFFPDP 116 (218)
T ss_dssp EESCCC
T ss_pred EeCCCC
Confidence 984443
No 128
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.95 E-value=1.1e-09 Score=101.40 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=71.0
Q ss_pred eEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccc
Q psy11730 292 SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 292 ~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+|||||||+|.++..+++.+. +|+|+|+|+.|++.++++....+ .++.+..+|+.+++.. .++||+|++.....
T Consensus 32 ~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~----~~~~~~~~d~~~~~~~-~~~fD~v~~~~~~~ 105 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKG----VKITTVQSNLADFDIV-ADAWEGIVSIFCHL 105 (202)
T ss_dssp EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHT----CCEEEECCBTTTBSCC-TTTCSEEEEECCCC
T ss_pred CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcC----CceEEEEcChhhcCCC-cCCccEEEEEhhcC
Confidence 999999999999999988764 89999999999999887653322 2789999999887643 57999999965433
Q ss_pred cccchHhHhhee--eecCCC
Q psy11730 372 SVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 372 ~~~~~~~~~~~~--~l~p~~ 389 (496)
+..+...+++.. .|.|++
T Consensus 106 ~~~~~~~~l~~~~~~L~pgG 125 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLKPGG 125 (202)
T ss_dssp CHHHHHHHHHHHHTTCCSSE
T ss_pred CHHHHHHHHHHHHHhcCCCc
Confidence 335666676652 455554
No 129
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.94 E-value=9.2e-10 Score=106.71 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=72.1
Q ss_pred cchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccc-cCCCCceEEEeccc
Q psy11730 273 ECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMN-TDNLEKCKFYHGDW 350 (496)
Q Consensus 273 ~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~-~~~~~~v~~~~~d~ 350 (496)
.++..|+.++. ..++.+|||||||+|.+++.+++..+ .+|+|+|+++.+++.|+++..... .+...+++++++|+
T Consensus 23 ~D~~lL~~~~~---~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~ 99 (260)
T 2ozv_A 23 MDAMLLASLVA---DDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADV 99 (260)
T ss_dssp CHHHHHHHTCC---CCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCT
T ss_pred cHHHHHHHHhc---ccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCH
Confidence 45555555543 22467999999999999999998875 699999999999999987653310 11234699999999
Q ss_pred CCccc------cCCCceeEEEEccccccc
Q psy11730 351 GSLSA------VIHSKFDIILTSETIYSV 373 (496)
Q Consensus 351 ~~~~~------~~~~~fD~Ii~~~~l~~~ 373 (496)
.+... ...++||+|++++++...
T Consensus 100 ~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~ 128 (260)
T 2ozv_A 100 TLRAKARVEAGLPDEHFHHVIMNPPYNDA 128 (260)
T ss_dssp TCCHHHHHHTTCCTTCEEEEEECCCC---
T ss_pred HHHhhhhhhhccCCCCcCEEEECCCCcCC
Confidence 88732 225789999999888754
No 130
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.94 E-value=1.7e-09 Score=97.73 Aligned_cols=98 Identities=19% Similarity=0.273 Sum_probs=74.5
Q ss_pred hHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+.+.+.+... .++.+|||+|||+|.++..+++ ...+|+|+|+|+.+++.++++....+ ..+++++.+|+.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~~~~~~~d~~~- 94 (183)
T 2yxd_A 20 KEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFN---IKNCQIIKGRAED- 94 (183)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTT---CCSEEEEESCHHH-
T ss_pred HHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcC---CCcEEEEECCccc-
Confidence 3444555554444 3578999999999999999888 66899999999999999987654332 3679999999887
Q ss_pred cccCCCceeEEEEccccccccchHhHhhe
Q psy11730 354 SAVIHSKFDIILTSETIYSVANYNKLLTV 382 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~ 382 (496)
... .+.||+|+++.+ .+...+++.
T Consensus 95 ~~~-~~~~D~i~~~~~----~~~~~~l~~ 118 (183)
T 2yxd_A 95 VLD-KLEFNKAFIGGT----KNIEKIIEI 118 (183)
T ss_dssp HGG-GCCCSEEEECSC----SCHHHHHHH
T ss_pred ccc-CCCCcEEEECCc----ccHHHHHHH
Confidence 322 478999999988 555666654
No 131
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.93 E-value=1.2e-09 Score=102.66 Aligned_cols=81 Identities=12% Similarity=-0.002 Sum_probs=65.2
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc-cCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~Ii~ 366 (496)
.+.+|||||||+|.+++.+++..+ ..|+|+|+|+.|++.|+++.... ...|+.++.+|+.+++. ...++||.|++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~---~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDS---EAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHS---CCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHc---CCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 577999999999999999998765 78999999999999998765433 24689999999988652 22578999998
Q ss_pred cccccc
Q psy11730 367 SETIYS 372 (496)
Q Consensus 367 ~~~l~~ 372 (496)
+.+..+
T Consensus 115 ~~~~p~ 120 (213)
T 2fca_A 115 NFSDPW 120 (213)
T ss_dssp ESCCCC
T ss_pred ECCCCC
Confidence 765443
No 132
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.93 E-value=3.8e-09 Score=99.86 Aligned_cols=92 Identities=16% Similarity=0.121 Sum_probs=72.0
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.++..+.+... .++.+|||||||+|.++..++..+ .+|+|+|+|+.+++.++++.... .+++++.+|+.+...
T Consensus 57 ~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~-----~~v~~~~~d~~~~~~ 130 (231)
T 1vbf_A 57 NLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYY-----NNIKLILGDGTLGYE 130 (231)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTC-----SSEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhc-----CCeEEEECCcccccc
Confidence 33444444443 357899999999999999999887 79999999999999988765321 179999999887322
Q ss_pred cCCCceeEEEEccccccccc
Q psy11730 356 VIHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~ 375 (496)
..++||+|++..+++++.+
T Consensus 131 -~~~~fD~v~~~~~~~~~~~ 149 (231)
T 1vbf_A 131 -EEKPYDRVVVWATAPTLLC 149 (231)
T ss_dssp -GGCCEEEEEESSBBSSCCH
T ss_pred -cCCCccEEEECCcHHHHHH
Confidence 2578999999999998853
No 133
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.93 E-value=2.3e-09 Score=103.06 Aligned_cols=98 Identities=8% Similarity=-0.031 Sum_probs=69.8
Q ss_pred hHHHHHHHHhCCC---CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 275 TFDLLNFIKDNVA---VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 275 ~~~l~~~l~~~~~---~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
...++..+..... .++.+|||||||+|.+++.++... ..+|+|+|+|+.|++.|+++....+ ...+++++++|+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~ 125 (254)
T 2h00_A 48 YIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNN--LSDLIKVVKVPQ 125 (254)
T ss_dssp HHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCT
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcC--CCccEEEEEcch
Confidence 3344444544433 257799999999999999988764 4799999999999999987754332 234599999997
Q ss_pred CCc-cc-cC---CCceeEEEEcccccccc
Q psy11730 351 GSL-SA-VI---HSKFDIILTSETIYSVA 374 (496)
Q Consensus 351 ~~~-~~-~~---~~~fD~Ii~~~~l~~~~ 374 (496)
.+. .. .. +++||+|++++++++..
T Consensus 126 ~~~~~~~~~~~~~~~fD~i~~npp~~~~~ 154 (254)
T 2h00_A 126 KTLLMDALKEESEIIYDFCMCNPPFFANQ 154 (254)
T ss_dssp TCSSTTTSTTCCSCCBSEEEECCCCC---
T ss_pred hhhhhhhhhcccCCcccEEEECCCCccCc
Confidence 762 21 11 25899999999987654
No 134
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.93 E-value=1.1e-09 Score=103.02 Aligned_cols=84 Identities=17% Similarity=0.126 Sum_probs=71.1
Q ss_pred CCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSET 369 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~ 369 (496)
+.+|||||||+|.++..++.. +|+|+|+.|++.++++ ++.++.+|+.+++.. .++||+|++..+
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~----------~~~~~~~d~~~~~~~-~~~fD~v~~~~~ 111 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR----------GVFVLKGTAENLPLK-DESFDFALMVTT 111 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT----------TCEEEECBTTBCCSC-TTCEEEEEEESC
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc----------CCEEEEcccccCCCC-CCCeeEEEEcch
Confidence 789999999999999987655 9999999999998754 578899998887643 578999999999
Q ss_pred cccccchHhHhhee--eecCCC
Q psy11730 370 IYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 370 l~~~~~~~~~~~~~--~l~p~~ 389 (496)
++|++++..+++.. .|.|++
T Consensus 112 l~~~~~~~~~l~~~~~~L~pgG 133 (219)
T 1vlm_A 112 ICFVDDPERALKEAYRILKKGG 133 (219)
T ss_dssp GGGSSCHHHHHHHHHHHEEEEE
T ss_pred HhhccCHHHHHHHHHHHcCCCc
Confidence 99999999888763 556654
No 135
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.92 E-value=1e-09 Score=111.65 Aligned_cols=115 Identities=14% Similarity=0.082 Sum_probs=80.6
Q ss_pred chHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccc------cccCCCCceEE
Q psy11730 274 CTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNIL------MNTDNLEKCKF 345 (496)
Q Consensus 274 ~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~------~~~~~~~~v~~ 345 (496)
....++..+.+... .++.+|||||||+|.+++.++.. +..+|+|||+|+.|++.|+++... .+.....+++|
T Consensus 157 t~~~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVef 236 (438)
T 3uwp_A 157 TSFDLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTL 236 (438)
T ss_dssp THHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEE
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEE
Confidence 34444455555444 35889999999999999999865 445699999999999988764311 11111368999
Q ss_pred EecccCCccccCC-CceeEEEEccccccccchHhHhhe--eeecCCC
Q psy11730 346 YHGDWGSLSAVIH-SKFDIILTSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 346 ~~~d~~~~~~~~~-~~fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
+++|+.+++.... ..||+|+++.++ +.++....+.+ ..|.|++
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~-F~pdl~~aL~Ei~RvLKPGG 282 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFA-FGPEVDHQLKERFANMKEGG 282 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTT-CCHHHHHHHHHHHTTSCTTC
T ss_pred EECcccCCccccccCCccEEEEcccc-cCchHHHHHHHHHHcCCCCc
Confidence 9999998765311 479999998776 45666666654 2556654
No 136
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.92 E-value=2.7e-09 Score=96.27 Aligned_cols=97 Identities=11% Similarity=0.072 Sum_probs=69.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.++.+|||||||+|.++..+++.. ..+|+|+|+|+.+++.++++....+ ...++ ++.+|..+......++||+|++
T Consensus 24 ~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 24 KPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLG--VSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTT--CTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhC--CCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 357799999999999999998875 4789999999999999987653322 22377 7888875433222378999999
Q ss_pred ccccccccchHhHhheeeecCCC
Q psy11730 367 SETIYSVANYNKLLTVWCLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~~l~p~~ 389 (496)
..++++..-.+.+.+ .|.|++
T Consensus 101 ~~~~~~~~~l~~~~~--~L~~gG 121 (178)
T 3hm2_A 101 GGGLTAPGVFAAAWK--RLPVGG 121 (178)
T ss_dssp CC-TTCTTHHHHHHH--TCCTTC
T ss_pred CCcccHHHHHHHHHH--hcCCCC
Confidence 999988222222222 455655
No 137
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.92 E-value=3.1e-09 Score=103.72 Aligned_cols=97 Identities=15% Similarity=0.196 Sum_probs=75.9
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
.+....+++.+.+....++.+|||+|||+|.+++.+++.. ..+|+|+|+|+.+++.++++....+ ..+++++++|+
T Consensus 92 r~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~---~~~v~~~~~d~ 168 (276)
T 2b3t_A 92 RPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLA---IKNIHILQSDW 168 (276)
T ss_dssp CTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCST
T ss_pred CchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEEcch
Confidence 3456667777766554457799999999999999998654 4799999999999999987754332 34799999998
Q ss_pred CCccccCCCceeEEEEccccccc
Q psy11730 351 GSLSAVIHSKFDIILTSETIYSV 373 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~~~ 373 (496)
.+... .++||+|++++++...
T Consensus 169 ~~~~~--~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 169 FSALA--GQQFAMIVSNPPYIDE 189 (276)
T ss_dssp TGGGT--TCCEEEEEECCCCBCT
T ss_pred hhhcc--cCCccEEEECCCCCCc
Confidence 87432 5789999999887655
No 138
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.92 E-value=2.1e-09 Score=109.81 Aligned_cols=108 Identities=21% Similarity=0.318 Sum_probs=76.2
Q ss_pred HHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 280 NFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 280 ~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
+++.+... ..+.+|||||||+|.+++.+++.++ .+|+|+|+|+.|++.++++...++.....+++|..+|+.+...
T Consensus 212 ~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~-- 289 (375)
T 4dcm_A 212 RFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE-- 289 (375)
T ss_dssp HHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC--
T ss_pred HHHHHhCcccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC--
Confidence 34444443 3468999999999999999999874 7999999999999999987654432223468899999887332
Q ss_pred CCceeEEEEccccccccch-----HhHhhee--eecCCC
Q psy11730 358 HSKFDIILTSETIYSVANY-----NKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~~~~-----~~~~~~~--~l~p~~ 389 (496)
.++||+|++++++++.... ..+++.. .|.|+|
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG 328 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKING 328 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCc
Confidence 5789999999999864322 2344442 566665
No 139
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=2.3e-09 Score=97.81 Aligned_cols=91 Identities=21% Similarity=0.302 Sum_probs=72.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc-
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS- 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~- 367 (496)
++.+|||||||+|.++..+++.+ .+|+|+|+|+.+++.++++. .++.++.+|+.+++.. .++||+|++.
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~--------~~~~~~~~d~~~~~~~-~~~~D~i~~~~ 115 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQG-HDVLGTDLDPILIDYAKQDF--------PEARWVVGDLSVDQIS-ETDFDLIVSAG 115 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTTSCCC-CCCEEEEEECC
T ss_pred CCCeEEEECCCCCHHHHHHHHCC-CcEEEEcCCHHHHHHHHHhC--------CCCcEEEcccccCCCC-CCceeEEEECC
Confidence 67899999999999999999885 58999999999999988643 3588999999886543 5789999998
Q ss_pred cccccc--cchHhHhhee--eecCCC
Q psy11730 368 ETIYSV--ANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~--~~~~~~~~~~--~l~p~~ 389 (496)
.+++++ ++...+++.. .+.|++
T Consensus 116 ~~~~~~~~~~~~~~l~~~~~~l~~~G 141 (195)
T 3cgg_A 116 NVMGFLAEDGREPALANIHRALGADG 141 (195)
T ss_dssp CCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred cHHhhcChHHHHHHHHHHHHHhCCCC
Confidence 678877 3445666542 455554
No 140
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.91 E-value=1.6e-09 Score=102.82 Aligned_cols=100 Identities=13% Similarity=-0.049 Sum_probs=70.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCC-HHHHHHh---cCcccccccCCCCceEEEecccCCccccCCCcee
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYN-QEVIESL---TLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFD 362 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s-~~~i~~a---~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 362 (496)
.++.+|||||||+|.++..+++..+ ..|+|+|+| +.|++.| +++.... ...++.|..+|+++++......+|
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~---~~~~v~~~~~d~~~l~~~~~d~v~ 99 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKG---GLSNVVFVIAAAESLPFELKNIAD 99 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGT---CCSSEEEECCBTTBCCGGGTTCEE
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHc---CCCCeEEEEcCHHHhhhhccCeEE
Confidence 3678999999999999999987554 689999999 7777666 7665332 356899999999988643335677
Q ss_pred EEEEccccccc-----cchHhHhhe--eeecCCCC
Q psy11730 363 IILTSETIYSV-----ANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 363 ~Ii~~~~l~~~-----~~~~~~~~~--~~l~p~~~ 390 (496)
.|.++.+..+. .+...++++ ..|.|+|.
T Consensus 100 ~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~ 134 (225)
T 3p2e_A 100 SISILFPWGTLLEYVIKPNRDILSNVADLAKKEAH 134 (225)
T ss_dssp EEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEE
T ss_pred EEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcE
Confidence 77776553331 122344544 26777663
No 141
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.90 E-value=5.6e-10 Score=115.55 Aligned_cols=106 Identities=12% Similarity=0.100 Sum_probs=78.5
Q ss_pred HHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+++.+.+...+ ++.+|||||||+|.++..+++.+. +|+|+|+|+.|++.|+++.... ....|...+.+.++.
T Consensus 94 ~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~~~~~-----~~~~~~~~~~~~l~~ 167 (416)
T 4e2x_A 94 MLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREKGIRV-----RTDFFEKATADDVRR 167 (416)
T ss_dssp HHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTTTCCE-----ECSCCSHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHcCCCc-----ceeeechhhHhhccc
Confidence 456666666554 477999999999999999998875 8999999999999998763111 011122233333333
Q ss_pred cCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
. +++||+|++..+++|++++..++++. .|.|+|
T Consensus 168 ~-~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG 202 (416)
T 4e2x_A 168 T-EGPANVIYAANTLCHIPYVQSVLEGVDALLAPDG 202 (416)
T ss_dssp H-HCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEE
T ss_pred C-CCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCe
Confidence 2 58999999999999999999999873 666765
No 142
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.89 E-value=5e-09 Score=99.50 Aligned_cols=116 Identities=12% Similarity=0.073 Sum_probs=84.7
Q ss_pred ceeeecchH-HHHHHHHhC---CCC-CCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCcccccccCCC
Q psy11730 268 GYKIWECTF-DLLNFIKDN---VAV-DKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILMNTDNL 340 (496)
Q Consensus 268 ~~~~~~~~~-~l~~~l~~~---~~~-~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~ 340 (496)
.|+.|+-.. .|+..|... +.+ +|.+|||||||+|.++..+|+. |+ ++|+|+|++++|++.+++++. ..
T Consensus 51 e~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~-----~~ 125 (233)
T 4df3_A 51 EYREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVR-----DR 125 (233)
T ss_dssp EEEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHST-----TC
T ss_pred eeeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhH-----hh
Confidence 688898754 466666543 334 4889999999999999999985 45 799999999999998876542 24
Q ss_pred CceEEEecccCCcccc--CCCceeEEEEccccccccchHhHhhe--eeecCCCC
Q psy11730 341 EKCKFYHGDWGSLSAV--IHSKFDIILTSETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 341 ~~v~~~~~d~~~~~~~--~~~~fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
.|+..+.+|....... ..+.+|+|++.. .+..+.+.++.+ ..|.|+|.
T Consensus 126 ~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~--~~~~~~~~~l~~~~r~LKpGG~ 177 (233)
T 4df3_A 126 RNIFPILGDARFPEKYRHLVEGVDGLYADV--AQPEQAAIVVRNARFFLRDGGY 177 (233)
T ss_dssp TTEEEEESCTTCGGGGTTTCCCEEEEEECC--CCTTHHHHHHHHHHHHEEEEEE
T ss_pred cCeeEEEEeccCccccccccceEEEEEEec--cCChhHHHHHHHHHHhccCCCE
Confidence 5888898887765432 257899999754 344566666655 36777764
No 143
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.89 E-value=1e-09 Score=115.63 Aligned_cols=93 Identities=22% Similarity=0.303 Sum_probs=73.3
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+.+.+.+... .++.+|||||||+|.+++.+++.+..+|+|+|+|+ |++.|+++....+ ...+++++.+|+.+++.
T Consensus 145 ~~~~~il~~l~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~g--l~~~v~~~~~d~~~~~~ 221 (480)
T 3b3j_A 145 TYQRAILQNHTDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNN--LTDRIVVIPGKVEEVSL 221 (480)
T ss_dssp HHHHHHHHTGGGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTT--CTTTEEEEESCTTTCCC
T ss_pred HHHHHHHHhhhhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcC--CCCcEEEEECchhhCcc
Confidence 34455555443 46789999999999999999998878999999998 9888876543322 34689999999998654
Q ss_pred cCCCceeEEEEcccccccc
Q psy11730 356 VIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~ 374 (496)
.++||+|+++.++++..
T Consensus 222 --~~~fD~Ivs~~~~~~~~ 238 (480)
T 3b3j_A 222 --PEQVDIIISEPMGYMLF 238 (480)
T ss_dssp --SSCEEEEECCCCHHHHT
T ss_pred --CCCeEEEEEeCchHhcC
Confidence 46899999999988774
No 144
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.88 E-value=2.9e-09 Score=96.92 Aligned_cols=108 Identities=19% Similarity=0.148 Sum_probs=76.9
Q ss_pred hHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+...+.+... .++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ ...++.+..+|+.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~ 94 (192)
T 1l3i_A 18 AMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHG--LGDNVTLMEGDAPEA 94 (192)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTT--CCTTEEEEESCHHHH
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcC--CCcceEEEecCHHHh
Confidence 3444455544433 457899999999999999999888 899999999999999887643322 226789999998762
Q ss_pred cccCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 354 SAVIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
... .+.||+|++..+++++ ..+++.. .+.|++
T Consensus 95 ~~~-~~~~D~v~~~~~~~~~---~~~l~~~~~~l~~gG 128 (192)
T 1l3i_A 95 LCK-IPDIDIAVVGGSGGEL---QEILRIIKDKLKPGG 128 (192)
T ss_dssp HTT-SCCEEEEEESCCTTCH---HHHHHHHHHTEEEEE
T ss_pred ccc-CCCCCEEEECCchHHH---HHHHHHHHHhcCCCc
Confidence 211 2689999999887654 4444431 455554
No 145
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.88 E-value=3.8e-09 Score=100.20 Aligned_cols=100 Identities=19% Similarity=0.101 Sum_probs=71.8
Q ss_pred HHHHH---HhCCCC-CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC
Q psy11730 278 LLNFI---KDNVAV-DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352 (496)
Q Consensus 278 l~~~l---~~~~~~-~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~ 352 (496)
++..+ .+...+ ++.+|||||||+|.++..+++. +..+|+|+|+|+.|++.++++... ..++.++.+|+.+
T Consensus 59 ~~~~i~~~l~~~~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~-----~~~v~~~~~d~~~ 133 (230)
T 1fbn_A 59 LAAAIIKGLKVMPIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAE-----RENIIPILGDANK 133 (230)
T ss_dssp HHHHHHTTCCCCCCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTT-----CTTEEEEECCTTC
T ss_pred HHHHHHhcccccCCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhc-----CCCeEEEECCCCC
Confidence 33555 333433 4779999999999999999987 447999999999999988765422 2689999999987
Q ss_pred ----ccccCCCceeEEEEccccccccch---HhHhhee--eecCCC
Q psy11730 353 ----LSAVIHSKFDIILTSETIYSVANY---NKLLTVW--CLFPTH 389 (496)
Q Consensus 353 ----~~~~~~~~fD~Ii~~~~l~~~~~~---~~~~~~~--~l~p~~ 389 (496)
.+. .+.||+|+. +++++ ..+++.. .|.|++
T Consensus 134 ~~~~~~~--~~~~D~v~~-----~~~~~~~~~~~l~~~~~~LkpgG 172 (230)
T 1fbn_A 134 PQEYANI--VEKVDVIYE-----DVAQPNQAEILIKNAKWFLKKGG 172 (230)
T ss_dssp GGGGTTT--SCCEEEEEE-----CCCSTTHHHHHHHHHHHHEEEEE
T ss_pred ccccccc--CccEEEEEE-----ecCChhHHHHHHHHHHHhCCCCc
Confidence 433 368999993 33444 4545442 566655
No 146
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.88 E-value=2.4e-09 Score=100.88 Aligned_cols=99 Identities=13% Similarity=0.036 Sum_probs=74.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC-----Cce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH-----SKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~f 361 (496)
++++|||||||+|..++.+++.. ..+|+++|+++.+++.|+++....+ ...+++++.+|+.+...... ++|
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 58 SPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAG--LQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp CCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcC--CCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 57899999999999999999853 4799999999999999987654332 23579999999866433222 689
Q ss_pred eEEEEccccccccchHhHhhe-eeecCCC
Q psy11730 362 DIILTSETIYSVANYNKLLTV-WCLFPTH 389 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~~~~~~~-~~l~p~~ 389 (496)
|+|++....++..+...++.. ..|.|++
T Consensus 136 D~V~~d~~~~~~~~~~~~~~~~~~LkpgG 164 (221)
T 3u81_A 136 DMVFLDHWKDRYLPDTLLLEKCGLLRKGT 164 (221)
T ss_dssp SEEEECSCGGGHHHHHHHHHHTTCCCTTC
T ss_pred EEEEEcCCcccchHHHHHHHhccccCCCe
Confidence 999999888877665555543 2455554
No 147
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.87 E-value=5.7e-09 Score=99.19 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=72.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc-cCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~Ii~ 366 (496)
++++|||||||+|..++.+++.. ..+|+|+|+++.+++.|+++....+ ...+++++.+|+.+... ...++||+|++
T Consensus 71 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 71 NVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYH--FENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp TCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 57899999999999999999865 4799999999999999987654332 23589999999987644 33689999998
Q ss_pred ccccccccchHhHhhe--eeecCCC
Q psy11730 367 SETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
...... ...+++. ..|.|++
T Consensus 149 ~~~~~~---~~~~l~~~~~~LkpgG 170 (232)
T 3ntv_A 149 DAAKAQ---SKKFFEIYTPLLKHQG 170 (232)
T ss_dssp ETTSSS---HHHHHHHHGGGEEEEE
T ss_pred cCcHHH---HHHHHHHHHHhcCCCe
Confidence 765433 3444433 1455554
No 148
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.87 E-value=1.8e-09 Score=104.03 Aligned_cols=94 Identities=18% Similarity=0.170 Sum_probs=72.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Ii 365 (496)
.+.+|||||||+|..++.++... ..+|+|+|+|+.+++.++++....+ ..+++++++|++++... ..++||+|+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~---l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLG---LKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHT---CSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC---CCceEEEECcHHHhhcccccCCCceEEE
Confidence 57899999999999999999875 4799999999999999988764433 45699999999987642 247899999
Q ss_pred EccccccccchHhHhhe--eeecCCC
Q psy11730 366 TSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
+..+ .+...+++. ..|.|+|
T Consensus 157 s~a~----~~~~~ll~~~~~~LkpgG 178 (249)
T 3g89_A 157 ARAV----APLCVLSELLLPFLEVGG 178 (249)
T ss_dssp EESS----CCHHHHHHHHGGGEEEEE
T ss_pred ECCc----CCHHHHHHHHHHHcCCCe
Confidence 9653 345555543 2455654
No 149
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.87 E-value=3.8e-09 Score=98.05 Aligned_cols=92 Identities=18% Similarity=0.208 Sum_probs=70.6
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.++..++... ..+|+|+|+|+.+++.++++.... ...++++..+|+.+... .++||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~---~~~~v~~~~~d~~~~~~--~~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHEL---KLENIEPVQSRVEEFPS--EPPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHT---TCSSEEEEECCTTTSCC--CSCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHc---CCCCeEEEecchhhCCc--cCCcCEEEEe
Confidence 57899999999999999998864 479999999999999988765332 24459999999988763 5789999986
Q ss_pred cccccccchHhHhhee--eecCCC
Q psy11730 368 ETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.. .++..+++.. .|.|+|
T Consensus 140 ~~----~~~~~~l~~~~~~L~~gG 159 (207)
T 1jsx_A 140 AF----ASLNDMVSWCHHLPGEQG 159 (207)
T ss_dssp CS----SSHHHHHHHHTTSEEEEE
T ss_pred cc----CCHHHHHHHHHHhcCCCc
Confidence 53 4455666542 455554
No 150
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.86 E-value=8.1e-09 Score=96.46 Aligned_cols=94 Identities=15% Similarity=0.109 Sum_probs=71.7
Q ss_pred HHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 278 LLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 278 l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
+...+.+... .++.+|||||||+|.++..+++.+. .+|+++|+|+.+++.++++....+ ..++++..+|+....
T Consensus 65 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~---~~~v~~~~~d~~~~~ 141 (215)
T 2yxe_A 65 MVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLG---YDNVIVIVGDGTLGY 141 (215)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHT---CTTEEEEESCGGGCC
T ss_pred HHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCeEEEECCcccCC
Confidence 3334444333 4578999999999999999998774 799999999999999887653322 356899999975432
Q ss_pred ccCCCceeEEEEccccccccc
Q psy11730 355 AVIHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~~~ 375 (496)
. ..++||+|++..+++++.+
T Consensus 142 ~-~~~~fD~v~~~~~~~~~~~ 161 (215)
T 2yxe_A 142 E-PLAPYDRIYTTAAGPKIPE 161 (215)
T ss_dssp G-GGCCEEEEEESSBBSSCCH
T ss_pred C-CCCCeeEEEECCchHHHHH
Confidence 2 1468999999999998863
No 151
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.85 E-value=3.6e-09 Score=104.25 Aligned_cols=91 Identities=14% Similarity=0.135 Sum_probs=72.9
Q ss_pred HHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 276 FDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
..+++.|.+...+ ++.+|||||||+|.++..+++. ..+|+|+|+++.|++.++++.. ...+++++++|+.+++
T Consensus 36 ~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~-----~~~~v~vi~gD~l~~~ 109 (295)
T 3gru_A 36 KNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKE-----LYNNIEIIWGDALKVD 109 (295)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHH-----HCSSEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhc-----cCCCeEEEECchhhCC
Confidence 3455556555544 5789999999999999999987 4789999999999999887653 2468999999999876
Q ss_pred ccCCCceeEEEEccccccc
Q psy11730 355 AVIHSKFDIILTSETIYSV 373 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~ 373 (496)
.. ...||+|+++.+++..
T Consensus 110 ~~-~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 110 LN-KLDFNKVVANLPYQIS 127 (295)
T ss_dssp GG-GSCCSEEEEECCGGGH
T ss_pred cc-cCCccEEEEeCccccc
Confidence 54 3579999999887654
No 152
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=98.85 E-value=2.7e-09 Score=107.17 Aligned_cols=99 Identities=21% Similarity=0.228 Sum_probs=73.6
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---CCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI---HSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~fD~Ii 365 (496)
++.+|||+|||+|.+++.+++.+. +|+|+|+|+.|++.|+++...++ ....+++++++|+.++.... .+.||+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~g-l~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAG-LEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHT-CTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcC-CCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 567999999999999999999887 99999999999999987654332 11125999999988764321 46899999
Q ss_pred Ecccccc----------ccchHhHhhee--eecCCC
Q psy11730 366 TSETIYS----------VANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 366 ~~~~l~~----------~~~~~~~~~~~--~l~p~~ 389 (496)
++++.+. ..+...+++.. .|.|++
T Consensus 231 ~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG 266 (332)
T 2igt_A 231 TDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKA 266 (332)
T ss_dssp ECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTC
T ss_pred ECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCc
Confidence 9888543 23445555542 456655
No 153
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.85 E-value=9.4e-09 Score=102.49 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=73.9
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
.+...+.+... .++.+|||||||+|.++..+++.+. .+|+|+|+|+++++.|+++.... ...++++..+|+.+.
T Consensus 62 ~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~---g~~~v~~~~~d~~~~ 138 (317)
T 1dl5_A 62 SLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERL---GIENVIFVCGDGYYG 138 (317)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHc---CCCCeEEEECChhhc
Confidence 44445544444 3578999999999999999998765 46999999999999998765332 245699999999875
Q ss_pred cccCCCceeEEEEcccccccc
Q psy11730 354 SAVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~~~ 374 (496)
... .++||+|++..+++++.
T Consensus 139 ~~~-~~~fD~Iv~~~~~~~~~ 158 (317)
T 1dl5_A 139 VPE-FSPYDVIFVTVGVDEVP 158 (317)
T ss_dssp CGG-GCCEEEEEECSBBSCCC
T ss_pred ccc-CCCeEEEEEcCCHHHHH
Confidence 442 57899999999999986
No 154
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.84 E-value=4.4e-09 Score=103.31 Aligned_cols=98 Identities=17% Similarity=0.194 Sum_probs=74.0
Q ss_pred ecchHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
.+....+++.+.+... .++.+|||||||+|.+++.++.....+|+|+|+|+.+++.|+++....+ ...+++|+++|+
T Consensus 105 r~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~--l~~~v~~~~~D~ 182 (284)
T 1nv8_A 105 RPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHG--VSDRFFVRKGEF 182 (284)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTT--CTTSEEEEESST
T ss_pred ChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECcc
Confidence 3455566666655432 2567999999999999999988844789999999999999988754332 233599999999
Q ss_pred CCccccCCCce---eEEEEcccccccc
Q psy11730 351 GSLSAVIHSKF---DIILTSETIYSVA 374 (496)
Q Consensus 351 ~~~~~~~~~~f---D~Ii~~~~l~~~~ 374 (496)
.+.. .++| |+|++++++....
T Consensus 183 ~~~~---~~~f~~~D~IvsnPPyi~~~ 206 (284)
T 1nv8_A 183 LEPF---KEKFASIEMILSNPPYVKSS 206 (284)
T ss_dssp TGGG---GGGTTTCCEEEECCCCBCGG
T ss_pred hhhc---ccccCCCCEEEEcCCCCCcc
Confidence 8743 2578 9999998876543
No 155
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.83 E-value=4.4e-09 Score=102.38 Aligned_cols=90 Identities=16% Similarity=0.024 Sum_probs=71.4
Q ss_pred HHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 276 FDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
..+++.|.+...+ ++ +|||||||+|.++..+++.+ .+|+|+|+++.|++.++++.. ..+++++++|+.+++
T Consensus 33 ~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~~~l~~~~~------~~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 33 EAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLRPVLEETLS------GLPVRLVFQDALLYP 104 (271)
T ss_dssp HHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGHHHHHHHTT------TSSEEEEESCGGGSC
T ss_pred HHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHHHHHHHhcC------CCCEEEEECChhhCC
Confidence 3455555555443 46 99999999999999999987 689999999999999887642 258999999999876
Q ss_pred ccCCCceeEEEEccccccc
Q psy11730 355 AVIHSKFDIILTSETIYSV 373 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~ 373 (496)
......+|.|+++.+++-.
T Consensus 105 ~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 105 WEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp GGGSCTTEEEEEEECSSCC
T ss_pred hhhccCccEEEecCccccc
Confidence 6422478999999987664
No 156
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=98.83 E-value=5.5e-09 Score=101.94 Aligned_cols=89 Identities=20% Similarity=0.129 Sum_probs=74.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
+|.+|||+|||+|.+++.+|+.|.++|+|+|+|+.+++.++++...++ ...+++++++|..++.. .+.||.|++++
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~--v~~~v~~~~~D~~~~~~--~~~~D~Vi~~~ 200 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNK--VEDRMSAYNMDNRDFPG--ENIADRILMGY 200 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCTTTCCC--CSCEEEEEECC
T ss_pred CCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEeCcHHHhcc--ccCCCEEEECC
Confidence 588999999999999999999998899999999999999987764433 34679999999988764 57899999998
Q ss_pred ccccccchHhHhh
Q psy11730 369 TIYSVANYNKLLT 381 (496)
Q Consensus 369 ~l~~~~~~~~~~~ 381 (496)
+.....-++.+++
T Consensus 201 p~~~~~~l~~a~~ 213 (278)
T 3k6r_A 201 VVRTHEFIPKALS 213 (278)
T ss_dssp CSSGGGGHHHHHH
T ss_pred CCcHHHHHHHHHH
Confidence 8766655555554
No 157
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.83 E-value=2.7e-09 Score=104.14 Aligned_cols=100 Identities=16% Similarity=0.164 Sum_probs=71.6
Q ss_pred CCeEEEecCcCCH----HHHHHHHc-c----CCeEEEEeCCHHHHHHhcCcccccc-----------------c---C--
Q psy11730 290 KLSVLDVGCGAGL----LGLYTLMN-G----AAHVSFQDYNQEVIESLTLPNILMN-----------------T---D-- 338 (496)
Q Consensus 290 ~~~VLDlGcGtG~----~~~~la~~-~----~~~v~giD~s~~~i~~a~~~~~~~~-----------------~---~-- 338 (496)
+.+|||+|||||. +++.+++. + ..+|+|+|+|+.|++.|++...... . .
T Consensus 106 ~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~ 185 (274)
T 1af7_A 106 EYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGL 185 (274)
T ss_dssp CEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSE
T ss_pred CcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCc
Confidence 4589999999998 66666664 3 2489999999999999987631100 0 0
Q ss_pred ------CCCceEEEecccCCccccCCCceeEEEEccccccccch--HhHhhee--eecCCC
Q psy11730 339 ------NLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 339 ------~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
...+|.|.++|+.+.+....+.||+|+|..+++|+++. ..+++.. .|.|+|
T Consensus 186 ~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG 246 (274)
T 1af7_A 186 VRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDG 246 (274)
T ss_dssp EEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEE
T ss_pred eeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCc
Confidence 01369999999987543224789999999999999655 5566542 566655
No 158
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.83 E-value=1.9e-09 Score=105.75 Aligned_cols=107 Identities=14% Similarity=0.106 Sum_probs=71.5
Q ss_pred cchHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEE-eccc
Q psy11730 273 ECTFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFY-HGDW 350 (496)
Q Consensus 273 ~~~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~-~~d~ 350 (496)
...+.|...|.... ..++++|||||||||.++..+++.|+.+|+|+|+|+.|++.+.++. .++... ..++
T Consensus 68 rg~~Kl~~~l~~~~~~~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~--------~rv~~~~~~ni 139 (291)
T 3hp7_A 68 RGGLKLEKALAVFNLSVEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQD--------DRVRSMEQYNF 139 (291)
T ss_dssp TTHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTC--------TTEEEECSCCG
T ss_pred chHHHHHHHHHhcCCCccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhC--------cccceecccCc
Confidence 44556777776654 4568899999999999999999999899999999999998743321 112111 1222
Q ss_pred CCccc--cCCCceeEEEEccccccccchHhHhhe--eeecCCCC
Q psy11730 351 GSLSA--VIHSKFDIILTSETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 351 ~~~~~--~~~~~fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
..+.. .+..+||+|++..+++++ ..++.+ ..|.|++.
T Consensus 140 ~~l~~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~ 180 (291)
T 3hp7_A 140 RYAEPVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQ 180 (291)
T ss_dssp GGCCGGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCE
T ss_pred eecchhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCE
Confidence 22221 113459999998887755 445544 25666653
No 159
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.83 E-value=1.3e-09 Score=102.19 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=69.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHh----cCcccccccCCCCceEEEecccCCccccCCCceeE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESL----TLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDI 363 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a----~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~ 363 (496)
++.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.+ +++.. .....+++++++|+++++.. .+. |.
T Consensus 27 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~---~~~~~~v~~~~~d~~~l~~~-~~~-d~ 101 (218)
T 3mq2_A 27 YDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPA---KGGLPNLLYLWATAERLPPL-SGV-GE 101 (218)
T ss_dssp SSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGG---GTCCTTEEEEECCSTTCCSC-CCE-EE
T ss_pred CCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhh---hcCCCceEEEecchhhCCCC-CCC-CE
Confidence 578999999999999999999874 7899999999988753 32221 12356899999999997763 344 66
Q ss_pred EEE---ccccc--cccchHhHhhee--eecCCC
Q psy11730 364 ILT---SETIY--SVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 364 Ii~---~~~l~--~~~~~~~~~~~~--~l~p~~ 389 (496)
|+. ....+ |++++..++++. .|.|++
T Consensus 102 v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 134 (218)
T 3mq2_A 102 LHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGA 134 (218)
T ss_dssp EEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEE
T ss_pred EEEEccchhhhhhhhccHHHHHHHHHHHcCCCc
Confidence 653 33332 666777777763 667765
No 160
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.82 E-value=5e-09 Score=101.19 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=70.7
Q ss_pred HHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 276 FDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
..+++.|.+... .++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++... ..+++++++|+.+++
T Consensus 15 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~-----~~~v~~i~~D~~~~~ 88 (255)
T 3tqs_A 15 SFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQ-----QKNITIYQNDALQFD 88 (255)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTT-----CTTEEEEESCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhh-----CCCcEEEEcchHhCC
Confidence 344555555544 357899999999999999999887 7899999999999998876521 468999999999876
Q ss_pred ccC---CCceeEEEEccccccc
Q psy11730 355 AVI---HSKFDIILTSETIYSV 373 (496)
Q Consensus 355 ~~~---~~~fD~Ii~~~~l~~~ 373 (496)
... ...|| |+++.+++-.
T Consensus 89 ~~~~~~~~~~~-vv~NlPY~is 109 (255)
T 3tqs_A 89 FSSVKTDKPLR-VVGNLPYNIS 109 (255)
T ss_dssp GGGSCCSSCEE-EEEECCHHHH
T ss_pred HHHhccCCCeE-EEecCCcccC
Confidence 532 24688 8888887543
No 161
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.82 E-value=5.6e-09 Score=99.64 Aligned_cols=79 Identities=11% Similarity=0.076 Sum_probs=63.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.+++.+++.++ .+|+|+|+++.+++.|+++...++ ...++++..+|..+.... ...||+|++.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~I~v~~gD~l~~~~~-~~~~D~Ivia 97 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSG--LTEQIDVRKGNGLAVIEK-KDAIDTIVIA 97 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEecchhhccCc-cccccEEEEe
Confidence 567999999999999999999986 689999999999999988764433 345799999998776542 2369999876
Q ss_pred ccc
Q psy11730 368 ETI 370 (496)
Q Consensus 368 ~~l 370 (496)
.+.
T Consensus 98 gmG 100 (244)
T 3gnl_A 98 GMG 100 (244)
T ss_dssp EEC
T ss_pred CCc
Confidence 543
No 162
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.81 E-value=5.3e-09 Score=99.24 Aligned_cols=94 Identities=11% Similarity=-0.076 Sum_probs=66.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc--ccCCCceeEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS--AVIHSKFDII 364 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~fD~I 364 (496)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.+.+.+.. ..+++++.+|+.+.. ....++||+|
T Consensus 77 ~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~-----~~~v~~~~~d~~~~~~~~~~~~~~D~V 151 (233)
T 2ipx_A 77 PGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKK-----RTNIIPVIEDARHPHKYRMLIAMVDVI 151 (233)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHH-----CTTEEEECSCTTCGGGGGGGCCCEEEE
T ss_pred CCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhc-----cCCeEEEEcccCChhhhcccCCcEEEE
Confidence 47799999999999999999873 37999999998877665544322 157999999998743 1125789999
Q ss_pred EEccccccccchHhHhhe--eeecCCC
Q psy11730 365 LTSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
+++.+ .......++.. ..|.|++
T Consensus 152 ~~~~~--~~~~~~~~~~~~~~~LkpgG 176 (233)
T 2ipx_A 152 FADVA--QPDQTRIVALNAHTFLRNGG 176 (233)
T ss_dssp EECCC--CTTHHHHHHHHHHHHEEEEE
T ss_pred EEcCC--CccHHHHHHHHHHHHcCCCe
Confidence 99766 22222333432 2566655
No 163
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.81 E-value=6.3e-09 Score=98.47 Aligned_cols=80 Identities=15% Similarity=-0.005 Sum_probs=65.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.+++.+++.++ .+|+|+|+++.+++.|+++...++ ...++++..+|..+.... ...||+|+..
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~g--l~~~I~~~~gD~l~~~~~-~~~~D~Ivia 97 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHG--LTSKIDVRLANGLSAFEE-ADNIDTITIC 97 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECchhhcccc-ccccCEEEEe
Confidence 577999999999999999999986 689999999999999988764433 345799999998876542 2479998876
Q ss_pred cccc
Q psy11730 368 ETIY 371 (496)
Q Consensus 368 ~~l~ 371 (496)
.+.-
T Consensus 98 GmGg 101 (230)
T 3lec_A 98 GMGG 101 (230)
T ss_dssp EECH
T ss_pred CCch
Confidence 5543
No 164
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.81 E-value=1e-08 Score=99.24 Aligned_cols=90 Identities=14% Similarity=0.166 Sum_probs=70.5
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+.+.+......++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.++++. .++.+..+|+.+++.
T Consensus 73 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~--------~~~~~~~~d~~~~~~ 144 (269)
T 1p91_A 73 AIVAQLRERLDDKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRY--------PQVTFCVASSHRLPF 144 (269)
T ss_dssp HHHHHHHHHSCTTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHC--------TTSEEEECCTTSCSB
T ss_pred HHHHHHHHhcCCCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhC--------CCcEEEEcchhhCCC
Confidence 45555555443467899999999999999999874 468999999999999987643 467899999988765
Q ss_pred cCCCceeEEEEccccccccc
Q psy11730 356 VIHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~ 375 (496)
. +++||+|++..+...+..
T Consensus 145 ~-~~~fD~v~~~~~~~~l~~ 163 (269)
T 1p91_A 145 S-DTSMDAIIRIYAPCKAEE 163 (269)
T ss_dssp C-TTCEEEEEEESCCCCHHH
T ss_pred C-CCceeEEEEeCChhhHHH
Confidence 4 579999999877554433
No 165
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.81 E-value=3.1e-09 Score=102.03 Aligned_cols=96 Identities=16% Similarity=0.115 Sum_probs=68.6
Q ss_pred HHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHc--c-CCeEEEEeCCHHHHHHhcCccccc---ccCCCCc--------
Q psy11730 278 LLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN--G-AAHVSFQDYNQEVIESLTLPNILM---NTDNLEK-------- 342 (496)
Q Consensus 278 l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~--~-~~~v~giD~s~~~i~~a~~~~~~~---~~~~~~~-------- 342 (496)
+++.+..... ..+.+|||+|||+|.+++.+++. . ..+|+|+|+|+.|++.|+++.... +. ..+
T Consensus 39 l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~--~~~~~~~~~~~ 116 (250)
T 1o9g_A 39 IFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGL--TARELERREQS 116 (250)
T ss_dssp HHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHH--HHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccc--cccchhhhhhh
Confidence 4444444432 35679999999999999999876 3 368999999999999988654322 10 001
Q ss_pred -----------------eE-------------EEecccCCcccc----CCCceeEEEEccccccccc
Q psy11730 343 -----------------CK-------------FYHGDWGSLSAV----IHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 343 -----------------v~-------------~~~~d~~~~~~~----~~~~fD~Ii~~~~l~~~~~ 375 (496)
++ |.++|+.+.... ....||+|++++++.+...
T Consensus 117 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~ 183 (250)
T 1o9g_A 117 ERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTH 183 (250)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSS
T ss_pred hhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeecccc
Confidence 56 999998875421 2458999999998877654
No 166
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.80 E-value=5e-09 Score=100.02 Aligned_cols=84 Identities=10% Similarity=0.018 Sum_probs=63.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCccccc---ccCCCCceEEEecccCC-ccc-cCCCcee
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILM---NTDNLEKCKFYHGDWGS-LSA-VIHSKFD 362 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~---~~~~~~~v~~~~~d~~~-~~~-~~~~~fD 362 (496)
++.+|||||||+|.+++.+|+..+ ..|+|||+|+.|++.|+++.... ......|+.++.+|+.+ ++. ...++||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 456899999999999999998765 68999999999999887654221 11235689999999987 442 2268999
Q ss_pred EEEEcccccc
Q psy11730 363 IILTSETIYS 372 (496)
Q Consensus 363 ~Ii~~~~l~~ 372 (496)
.|++..+-.+
T Consensus 126 ~v~~~~~dp~ 135 (235)
T 3ckk_A 126 KMFFLFPDPH 135 (235)
T ss_dssp EEEEESCC--
T ss_pred EEEEeCCCch
Confidence 9998655433
No 167
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.80 E-value=4.1e-09 Score=101.75 Aligned_cols=94 Identities=18% Similarity=0.162 Sum_probs=72.2
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
++....+++.+... ..++.+|||+|||+|.+++.+++.+. +|+|+|+++.+++.++++...++ .. +++..+|+.
T Consensus 104 ~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~---~~-v~~~~~d~~ 177 (254)
T 2nxc_A 104 HETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNG---VR-PRFLEGSLE 177 (254)
T ss_dssp SHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTT---CC-CEEEESCHH
T ss_pred CHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcC---Cc-EEEEECChh
Confidence 44455566666654 34678999999999999999999887 99999999999999987654322 22 889999887
Q ss_pred CccccCCCceeEEEEccccccc
Q psy11730 352 SLSAVIHSKFDIILTSETIYSV 373 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~ 373 (496)
+.. ..++||+|+++.+.+++
T Consensus 178 ~~~--~~~~fD~Vv~n~~~~~~ 197 (254)
T 2nxc_A 178 AAL--PFGPFDLLVANLYAELH 197 (254)
T ss_dssp HHG--GGCCEEEEEEECCHHHH
T ss_pred hcC--cCCCCCEEEECCcHHHH
Confidence 632 15789999998766543
No 168
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.80 E-value=8.3e-09 Score=100.80 Aligned_cols=95 Identities=14% Similarity=0.115 Sum_probs=74.1
Q ss_pred CCeEEEecCcC---CHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc----------
Q psy11730 290 KLSVLDVGCGA---GLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---------- 355 (496)
Q Consensus 290 ~~~VLDlGcGt---G~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---------- 355 (496)
..+|||||||+ |.++..+++..+ .+|+++|+|+.|++.++++.. ...+++++.+|+.+...
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~-----~~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLA-----KDPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHT-----TCTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcC-----CCCCeEEEEeeCCCchhhhccchhhcc
Confidence 47999999999 988877666544 699999999999999987652 23579999999976421
Q ss_pred cCCCceeEEEEccccccccc--hHhHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVAN--YNKLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~--~~~~~~~~--~l~p~~ 389 (496)
....+||+|++..++||+++ ...+++++ .|.|++
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG 190 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGS 190 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTC
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCc
Confidence 11258999999999999987 77777763 455654
No 169
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.80 E-value=1.5e-08 Score=97.13 Aligned_cols=91 Identities=10% Similarity=0.167 Sum_probs=71.1
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+++.+.+...+ ++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++.. ...+++++++|+.++
T Consensus 15 d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~-----~~~~v~~~~~D~~~~ 88 (244)
T 1qam_A 15 SKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLV-----DHDNFQVLNKDILQF 88 (244)
T ss_dssp CHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTT-----TCCSEEEECCCGGGC
T ss_pred CHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhc-----cCCCeEEEEChHHhC
Confidence 44566777776654 47899999999999999999887 789999999999999886542 135899999999987
Q ss_pred cccCCCceeEEEEcccccc
Q psy11730 354 SAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 354 ~~~~~~~fD~Ii~~~~l~~ 372 (496)
+......| .|+++.+++.
T Consensus 89 ~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 89 KFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp CCCSSCCC-EEEEECCGGG
T ss_pred CcccCCCe-EEEEeCCccc
Confidence 65422345 6888887754
No 170
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.80 E-value=8.7e-09 Score=97.96 Aligned_cols=94 Identities=13% Similarity=0.143 Sum_probs=70.2
Q ss_pred HHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 278 LLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 278 l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
++..+.+... .++.+|||||||+|.++..+++.++.+|+++|+++.+++.++++.... ...++++..+|+. ....
T Consensus 79 ~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~---~~~~v~~~~~d~~-~~~~ 154 (235)
T 1jg1_A 79 MVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERA---GVKNVHVILGDGS-KGFP 154 (235)
T ss_dssp HHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHT---TCCSEEEEESCGG-GCCG
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHc---CCCCcEEEECCcc-cCCC
Confidence 3444444333 357799999999999999999877678999999999999988765332 2456899999973 2222
Q ss_pred CCCceeEEEEccccccccc
Q psy11730 357 IHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~ 375 (496)
....||+|++..+++++.+
T Consensus 155 ~~~~fD~Ii~~~~~~~~~~ 173 (235)
T 1jg1_A 155 PKAPYDVIIVTAGAPKIPE 173 (235)
T ss_dssp GGCCEEEEEECSBBSSCCH
T ss_pred CCCCccEEEECCcHHHHHH
Confidence 1346999999999988753
No 171
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.80 E-value=9e-09 Score=105.06 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=72.3
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
++..+......++.+|||+|||+|.+++.++..+. .+|+|+|+|+.|++.|+++....+ ...++++.++|+.+++..
T Consensus 206 la~~l~~~~~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~g--l~~~i~~~~~D~~~~~~~ 283 (373)
T 3tm4_A 206 IANAMIELAELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAG--VLDKIKFIQGDATQLSQY 283 (373)
T ss_dssp HHHHHHHHHTCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTT--CGGGCEEEECCGGGGGGT
T ss_pred HHHHHHHhhcCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcC--CCCceEEEECChhhCCcc
Confidence 44433333333578999999999999999998877 489999999999999988764332 236899999999998754
Q ss_pred CCCceeEEEEcccccc
Q psy11730 357 IHSKFDIILTSETIYS 372 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~ 372 (496)
.++||+|++++++..
T Consensus 284 -~~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 284 -VDSVDFAISNLPYGL 298 (373)
T ss_dssp -CSCEEEEEEECCCC-
T ss_pred -cCCcCEEEECCCCCc
Confidence 578999999998654
No 172
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.79 E-value=5.3e-09 Score=93.64 Aligned_cols=88 Identities=17% Similarity=0.241 Sum_probs=66.5
Q ss_pred hHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 275 TFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 275 ~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
...+.+.+.... ..++.+|||+|||+|.++..+++. ++ .+|+|+|+|+ ++. ..++++..+|+.
T Consensus 7 ~~~l~~~~~~~~~~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~-------------~~~~~~~~~d~~ 72 (180)
T 1ej0_A 7 WFKLDEIQQSDKLFKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP-------------IVGVDFLQGDFR 72 (180)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC-------------CTTEEEEESCTT
T ss_pred HHHHHHHHHHhCCCCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc-------------cCcEEEEEcccc
Confidence 334555555443 235779999999999999999887 55 7999999998 643 246888999998
Q ss_pred Cccc-------cCCCceeEEEEccccccccch
Q psy11730 352 SLSA-------VIHSKFDIILTSETIYSVANY 376 (496)
Q Consensus 352 ~~~~-------~~~~~fD~Ii~~~~l~~~~~~ 376 (496)
+.+. ...++||+|+++.++++..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~ 104 (180)
T 1ej0_A 73 DELVMKALLERVGDSKVQVVMSDMAPNMSGTP 104 (180)
T ss_dssp SHHHHHHHHHHHTTCCEEEEEECCCCCCCSCH
T ss_pred cchhhhhhhccCCCCceeEEEECCCccccCCC
Confidence 7641 125789999999998877655
No 173
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.78 E-value=9e-09 Score=97.22 Aligned_cols=79 Identities=13% Similarity=0.005 Sum_probs=62.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.+++.+++.++ .+|+|+|+++.+++.|+++...++ ...++++..+|+.+.... ...||+|+..
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~g--l~~~i~~~~~d~l~~l~~-~~~~D~Ivia 91 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHG--LKEKIQVRLANGLAAFEE-TDQVSVITIA 91 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTT--CTTTEEEEECSGGGGCCG-GGCCCEEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC--CCceEEEEECchhhhccc-CcCCCEEEEc
Confidence 567999999999999999999986 689999999999999988764443 345799999998543321 2369999876
Q ss_pred ccc
Q psy11730 368 ETI 370 (496)
Q Consensus 368 ~~l 370 (496)
.+.
T Consensus 92 G~G 94 (225)
T 3kr9_A 92 GMG 94 (225)
T ss_dssp EEC
T ss_pred CCC
Confidence 553
No 174
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.78 E-value=1.1e-08 Score=100.39 Aligned_cols=93 Identities=19% Similarity=0.142 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 276 FDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
..+++.|.+...+ ++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++....+ ...+++++++|+.+++
T Consensus 14 ~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~~-~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~D~~~~~ 90 (285)
T 1zq9_A 14 PLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEKA-KKVVACELDPRLVAELHKRVQGTP--VASKLQVLVGDVLKTD 90 (285)
T ss_dssp HHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTST--TGGGEEEEESCTTTSC
T ss_pred HHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhhC-CEEEEEECCHHHHHHHHHHHHhcC--CCCceEEEEcceeccc
Confidence 3455555555543 57799999999999999999886 489999999999999887642211 1258999999998875
Q ss_pred ccCCCceeEEEEcccccccc
Q psy11730 355 AVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~~ 374 (496)
. ..||+|+++.+++...
T Consensus 91 ~---~~fD~vv~nlpy~~~~ 107 (285)
T 1zq9_A 91 L---PFFDTCVANLPYQISS 107 (285)
T ss_dssp C---CCCSEEEEECCGGGHH
T ss_pred c---hhhcEEEEecCcccch
Confidence 3 3799999998877654
No 175
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.78 E-value=3.8e-09 Score=106.54 Aligned_cols=94 Identities=20% Similarity=0.271 Sum_probs=73.6
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.+.+|||||||+|.++..+++.++ .+|+|+|+|+.|++.++++....+ .++.++.+|+.+.. .++||+|+++
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~----~~~~~~~~d~~~~~---~~~fD~Iv~~ 268 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANG----VEGEVFASNVFSEV---KGRFDMIISN 268 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTT----CCCEEEECSTTTTC---CSCEEEEEEC
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhC----CCCEEEEccccccc---cCCeeEEEEC
Confidence 467999999999999999999887 599999999999999987654322 23677888877643 5789999999
Q ss_pred ccccc-----ccchHhHhhe--eeecCCC
Q psy11730 368 ETIYS-----VANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 368 ~~l~~-----~~~~~~~~~~--~~l~p~~ 389 (496)
+++++ ..+...+++. ..|.|+|
T Consensus 269 ~~~~~g~~~~~~~~~~~l~~~~~~LkpgG 297 (343)
T 2pjd_A 269 PPFHDGMQTSLDAAQTLIRGAVRHLNSGG 297 (343)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHGGGEEEEE
T ss_pred CCcccCccCCHHHHHHHHHHHHHhCCCCc
Confidence 99985 3455666665 3566665
No 176
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.77 E-value=1.7e-08 Score=95.25 Aligned_cols=89 Identities=18% Similarity=0.104 Sum_probs=66.3
Q ss_pred HHHHHHHHh---CCCC-CCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecc
Q psy11730 276 FDLLNFIKD---NVAV-DKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349 (496)
Q Consensus 276 ~~l~~~l~~---~~~~-~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d 349 (496)
..++..+.. ...+ ++.+|||+|||+|.++..+++. ++ .+|+|+|+|+.|++.++++... ..+++++.+|
T Consensus 56 ~~~~~~i~~~l~~~~~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~-----~~~v~~~~~d 130 (227)
T 1g8a_A 56 SKLGAAIMNGLKNFPIKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEE-----RRNIVPILGD 130 (227)
T ss_dssp CHHHHHHHTTCCCCCCCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSS-----CTTEEEEECC
T ss_pred hhHHHHHHhhHHhcCCCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhc-----cCCCEEEEcc
Confidence 345555533 2323 4779999999999999999976 44 7999999999998887665422 2689999999
Q ss_pred cCCccc--cCCCceeEEEEccc
Q psy11730 350 WGSLSA--VIHSKFDIILTSET 369 (496)
Q Consensus 350 ~~~~~~--~~~~~fD~Ii~~~~ 369 (496)
+.+... ...++||+|+++.+
T Consensus 131 ~~~~~~~~~~~~~~D~v~~~~~ 152 (227)
T 1g8a_A 131 ATKPEEYRALVPKVDVIFEDVA 152 (227)
T ss_dssp TTCGGGGTTTCCCEEEEEECCC
T ss_pred CCCcchhhcccCCceEEEECCC
Confidence 987431 22468999999766
No 177
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.77 E-value=1.3e-08 Score=99.18 Aligned_cols=77 Identities=14% Similarity=0.052 Sum_probs=65.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||+|||+|.+++.+++.+ ..+|+|+|+|+.+++.|+++...++ ..++.++.+|+.+. .. .+.||+|+++
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~---l~~~~~~~~d~~~~-~~-~~~~D~Vi~d 193 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNK---LNNVIPILADNRDV-EL-KDVADRVIMG 193 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTT---CSSEEEEESCGGGC-CC-TTCEEEEEEC
T ss_pred CCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCCEEEEECChHHc-Cc-cCCceEEEEC
Confidence 57899999999999999999875 4799999999999999987654432 45789999999887 33 5789999999
Q ss_pred ccc
Q psy11730 368 ETI 370 (496)
Q Consensus 368 ~~l 370 (496)
++.
T Consensus 194 ~p~ 196 (272)
T 3a27_A 194 YVH 196 (272)
T ss_dssp CCS
T ss_pred Ccc
Confidence 886
No 178
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=98.76 E-value=7.5e-09 Score=106.10 Aligned_cols=90 Identities=13% Similarity=0.017 Sum_probs=69.6
Q ss_pred HHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCC-ceEEEecccCCcccc-
Q psy11730 279 LNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLE-KCKFYHGDWGSLSAV- 356 (496)
Q Consensus 279 ~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~v~~~~~d~~~~~~~- 356 (496)
..++.+.. .++++|||+|||+|.+++.+++.++.+|+|+|+|+.|++.|+++...++ ... +++|+.+|+.+....
T Consensus 203 ~~~~~~~~-~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~--~~~~~v~~~~~D~~~~l~~~ 279 (385)
T 2b78_A 203 RNELINGS-AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANH--LDMANHQLVVMDVFDYFKYA 279 (385)
T ss_dssp HHHHHHTT-TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTT--CCCTTEEEEESCHHHHHHHH
T ss_pred HHHHHHHh-cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHH
Confidence 33444332 4678999999999999999998888899999999999999987764432 122 899999998774321
Q ss_pred --CCCceeEEEEccccc
Q psy11730 357 --IHSKFDIILTSETIY 371 (496)
Q Consensus 357 --~~~~fD~Ii~~~~l~ 371 (496)
...+||+|+++++..
T Consensus 280 ~~~~~~fD~Ii~DPP~~ 296 (385)
T 2b78_A 280 RRHHLTYDIIIIDPPSF 296 (385)
T ss_dssp HHTTCCEEEEEECCCCC
T ss_pred HHhCCCccEEEECCCCC
Confidence 135899999988874
No 179
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.75 E-value=1.8e-08 Score=102.78 Aligned_cols=98 Identities=13% Similarity=0.188 Sum_probs=76.1
Q ss_pred CCCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC-ccccCCCceeEE
Q psy11730 287 AVDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS-LSAVIHSKFDII 364 (496)
Q Consensus 287 ~~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~~fD~I 364 (496)
..++++||||| |+|.+++.++..++ .+|+|+|+|+.|++.|+++....+ ..+++++.+|+.+ ++....++||+|
T Consensus 170 ~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~l~~~~~~~fD~V 245 (373)
T 2qm3_A 170 DLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIG---YEDIEIFTFDLRKPLPDYALHKFDTF 245 (373)
T ss_dssp CSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHT---CCCEEEECCCTTSCCCTTTSSCBSEE
T ss_pred CCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcC---CCCEEEEEChhhhhchhhccCCccEE
Confidence 34688999999 99999999998887 899999999999999988764433 2389999999988 543225689999
Q ss_pred EEccccccccchHhHhhee--eecCCC
Q psy11730 365 LTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++++++... ...+++.. .+.|++
T Consensus 246 i~~~p~~~~~-~~~~l~~~~~~LkpgG 271 (373)
T 2qm3_A 246 ITDPPETLEA-IRAFVGRGIATLKGPR 271 (373)
T ss_dssp EECCCSSHHH-HHHHHHHHHHTBCSTT
T ss_pred EECCCCchHH-HHHHHHHHHHHcccCC
Confidence 9999876553 45555442 556655
No 180
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.75 E-value=8.8e-09 Score=101.60 Aligned_cols=82 Identities=16% Similarity=0.109 Sum_probs=63.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCccccccc--CCCCceEEEecccCCccccCCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNT--DNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
++++|||||||+|.++..+++.. ..+|+++|+++.+++.|+++....+. ...++++++.+|+.+......++||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 57899999999999999999874 47899999999999999987544322 2356899999998876544467899999
Q ss_pred Ecccc
Q psy11730 366 TSETI 370 (496)
Q Consensus 366 ~~~~l 370 (496)
++.+.
T Consensus 163 ~D~~~ 167 (294)
T 3adn_A 163 SDCTD 167 (294)
T ss_dssp ECC--
T ss_pred ECCCC
Confidence 96654
No 181
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.74 E-value=9.1e-09 Score=104.88 Aligned_cols=92 Identities=11% Similarity=0.147 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 276 FDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 276 ~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..+.+++.+.....+.+|||+|||+|.+++.+++ +..+|+|+|+|+.+++.|+++...++ ..+++|+.+|++++..
T Consensus 200 ~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~-~~~~V~gvd~~~~ai~~a~~n~~~ng---~~~v~~~~~d~~~~~~ 275 (369)
T 3bt7_A 200 IQMLEWALDVTKGSKGDLLELYCGNGNFSLALAR-NFDRVLATEIAKPSVAAAQYNIAANH---IDNVQIIRMAAEEFTQ 275 (369)
T ss_dssp HHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGG-GSSEEEEECCCHHHHHHHHHHHHHTT---CCSEEEECCCSHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHh-cCCEEEEEECCHHHHHHHHHHHHHcC---CCceEEEECCHHHHHH
Confidence 3566677666666678999999999999999776 56799999999999999987654332 4689999999887642
Q ss_pred cC-C--------------CceeEEEEccccc
Q psy11730 356 VI-H--------------SKFDIILTSETIY 371 (496)
Q Consensus 356 ~~-~--------------~~fD~Ii~~~~l~ 371 (496)
.. . ..||+|+++++..
T Consensus 276 ~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~ 306 (369)
T 3bt7_A 276 AMNGVREFNRLQGIDLKSYQCETIFVDPPRS 306 (369)
T ss_dssp HHSSCCCCTTGGGSCGGGCCEEEEEECCCTT
T ss_pred HHhhccccccccccccccCCCCEEEECcCcc
Confidence 11 1 3799999998864
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.74 E-value=1.7e-08 Score=104.32 Aligned_cols=110 Identities=14% Similarity=0.084 Sum_probs=74.0
Q ss_pred HHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHh-------cCcccccccCCCCceEEEec
Q psy11730 278 LLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESL-------TLPNILMNTDNLEKCKFYHG 348 (496)
Q Consensus 278 l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a-------~~~~~~~~~~~~~~v~~~~~ 348 (496)
++..+.+...+ ++.+|||||||+|.+++.+++. +..+|+|+|+++.+++.| +++....+ ....+++++.+
T Consensus 230 ~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~G-l~~~nV~~i~g 308 (433)
T 1u2z_A 230 FLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYG-MRLNNVEFSLK 308 (433)
T ss_dssp HHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTT-BCCCCEEEEES
T ss_pred HHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcC-CCCCceEEEEc
Confidence 33444444443 5789999999999999999986 446899999999999888 54432211 11368999987
Q ss_pred ccC-Cc-cc-cCCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 349 DWG-SL-SA-VIHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 349 d~~-~~-~~-~~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
|.. .. .. ...+.||+|+++.++ +.+++...++++ .|.|++
T Consensus 309 D~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LKpGG 353 (433)
T 1u2z_A 309 KSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAKVGC 353 (433)
T ss_dssp SCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCCTTC
T ss_pred CccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCCCCe
Confidence 533 21 11 114689999998776 446666666552 555655
No 183
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.74 E-value=1.2e-08 Score=97.96 Aligned_cols=96 Identities=11% Similarity=0.080 Sum_probs=70.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC--CceeEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH--SKFDII 364 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~fD~I 364 (496)
++++|||||||+|..++.+++.. ..+|+|+|+|+.+++.|+++....+ ...+++++.+|+.+...... ++||+|
T Consensus 63 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 63 QAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAG--VDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred CCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 57899999999999999999864 4799999999999999987754332 33589999999877433222 489999
Q ss_pred EEccccccccchHhHhhe--eeecCCC
Q psy11730 365 LTSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
++.... .+...+++. ..|.|++
T Consensus 141 ~~d~~~---~~~~~~l~~~~~~LkpGG 164 (248)
T 3tfw_A 141 FIDADK---PNNPHYLRWALRYSRPGT 164 (248)
T ss_dssp EECSCG---GGHHHHHHHHHHTCCTTC
T ss_pred EECCch---HHHHHHHHHHHHhcCCCe
Confidence 997653 333444443 2455654
No 184
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=98.73 E-value=1e-08 Score=101.41 Aligned_cols=90 Identities=21% Similarity=0.248 Sum_probs=66.4
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.+++.+.+... .++.+|||||||+|.++..+++.+ .+|+|+|+++.|++.++++.... ...+++++.+|+.+++.
T Consensus 29 ~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~---~~~~v~~~~~D~~~~~~ 104 (299)
T 2h1r_A 29 GILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYE---GYNNLEVYEGDAIKTVF 104 (299)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHT---TCCCEEC----CCSSCC
T ss_pred HHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHc---CCCceEEEECchhhCCc
Confidence 34455544443 357899999999999999988874 68999999999999988764322 23689999999988753
Q ss_pred cCCCceeEEEEccccccc
Q psy11730 356 VIHSKFDIILTSETIYSV 373 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~ 373 (496)
.+||+|+++.+++..
T Consensus 105 ---~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 105 ---PKFDVCTANIPYKIS 119 (299)
T ss_dssp ---CCCSEEEEECCGGGH
T ss_pred ---ccCCEEEEcCCcccc
Confidence 489999999887654
No 185
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=98.73 E-value=1.8e-08 Score=104.95 Aligned_cols=96 Identities=22% Similarity=0.204 Sum_probs=73.7
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
...+++.+.+...+ .+.+|||+|||+|.+++.+++. ..+|+|+|+|+.|++.|+++...++ ..+++|+.+|+.+.
T Consensus 271 ~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~---~~~v~f~~~d~~~~ 346 (433)
T 1uwv_A 271 NQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNG---LQNVTFYHENLEED 346 (433)
T ss_dssp HHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCTTSC
T ss_pred HHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEECCHHHH
Confidence 33456666555443 5679999999999999999887 5789999999999999987654332 45899999999874
Q ss_pred cc---cCCCceeEEEEcccccccc
Q psy11730 354 SA---VIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 354 ~~---~~~~~fD~Ii~~~~l~~~~ 374 (496)
.. ...++||+|+++++..-..
T Consensus 347 l~~~~~~~~~fD~Vv~dPPr~g~~ 370 (433)
T 1uwv_A 347 VTKQPWAKNGFDKVLLDPARAGAA 370 (433)
T ss_dssp CSSSGGGTTCCSEEEECCCTTCCH
T ss_pred hhhhhhhcCCCCEEEECCCCccHH
Confidence 32 1246899999999876553
No 186
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.71 E-value=2.9e-08 Score=95.56 Aligned_cols=90 Identities=16% Similarity=0.206 Sum_probs=69.8
Q ss_pred HHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 276 FDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 276 ~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
..+++.|.+...+ ++.+|||||||+|.++..+++.+..+|+|+|+++.|++.++++ ...+++++++|+.+++
T Consensus 17 ~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-------~~~~v~~i~~D~~~~~ 89 (249)
T 3ftd_A 17 EGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-------GDERLEVINEDASKFP 89 (249)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-------CCTTEEEECSCTTTCC
T ss_pred HHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-------cCCCeEEEEcchhhCC
Confidence 3455556555544 5789999999999999999988778999999999999999875 1357999999999876
Q ss_pred ccCC-CceeEEEEccccccc
Q psy11730 355 AVIH-SKFDIILTSETIYSV 373 (496)
Q Consensus 355 ~~~~-~~fD~Ii~~~~l~~~ 373 (496)
.... +.| .|+++.+++-.
T Consensus 90 ~~~~~~~~-~vv~NlPy~i~ 108 (249)
T 3ftd_A 90 FCSLGKEL-KVVGNLPYNVA 108 (249)
T ss_dssp GGGSCSSE-EEEEECCTTTH
T ss_pred hhHccCCc-EEEEECchhcc
Confidence 5421 234 78888887543
No 187
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.71 E-value=1.3e-08 Score=100.83 Aligned_cols=102 Identities=18% Similarity=0.141 Sum_probs=71.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccc-cCCCCceEEEecccCCcccc-CCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMN-TDNLEKCKFYHGDWGSLSAV-IHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~-~~~~~~v~~~~~d~~~~~~~-~~~~fD~I 364 (496)
.++++|||||||+|.++..+++.. ..+|+++|+++.+++.++++....+ .....+++++.+|+.+.... ..++||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 357899999999999999998874 4799999999999999987653211 12356899999998876543 36789999
Q ss_pred EEccccccccch----HhHhhe--eeecCCC
Q psy11730 365 LTSETIYSVANY----NKLLTV--WCLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~----~~~~~~--~~l~p~~ 389 (496)
+++.+.++.+.. ..+++. ..|.|+|
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG 204 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDG 204 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCc
Confidence 997766553322 334443 2566655
No 188
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.71 E-value=2.3e-08 Score=101.53 Aligned_cols=98 Identities=13% Similarity=0.130 Sum_probs=75.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
...+|||||||+|.++..+++..+ .+++++|+ +.+++.++++....+ ...+++|..+|+.+......+.||+|++.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLS--GSERIHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCT--TGGGEEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcC--cccceEEEEccccccCCCCCCCcCEEEEe
Confidence 567999999999999999998765 68999999 999999887653221 23689999999987531113789999999
Q ss_pred cccccccchH--hHhhee--eecCCC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
.++|++++.+ .++++. .|.|++
T Consensus 256 ~vlh~~~~~~~~~~l~~~~~~L~pgG 281 (363)
T 3dp7_A 256 QFLDCFSEEEVISILTRVAQSIGKDS 281 (363)
T ss_dssp SCSTTSCHHHHHHHHHHHHHHCCTTC
T ss_pred chhhhCCHHHHHHHHHHHHHhcCCCc
Confidence 9999987654 456552 566655
No 189
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.71 E-value=2.6e-08 Score=100.83 Aligned_cols=94 Identities=18% Similarity=0.111 Sum_probs=74.1
Q ss_pred hHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHcc-C-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 275 TFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNG-A-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 275 ~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~-~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
...++..+..... .++.+|||+|||+|.+++.++..+ + .+|+|+|+++.|++.|+++....+ ..+++|.++|+.
T Consensus 188 ~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g---~~~i~~~~~D~~ 264 (354)
T 3tma_A 188 TPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASG---LSWIRFLRADAR 264 (354)
T ss_dssp CHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTT---CTTCEEEECCGG
T ss_pred CHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcC---CCceEEEeCChh
Confidence 3345555555444 357799999999999999999876 3 789999999999999988764432 238999999999
Q ss_pred CccccCCCceeEEEEcccccc
Q psy11730 352 SLSAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~ 372 (496)
+++.. ...||+|++++++..
T Consensus 265 ~~~~~-~~~~D~Ii~npPyg~ 284 (354)
T 3tma_A 265 HLPRF-FPEVDRILANPPHGL 284 (354)
T ss_dssp GGGGT-CCCCSEEEECCCSCC
T ss_pred hCccc-cCCCCEEEECCCCcC
Confidence 98764 456899999998754
No 190
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.71 E-value=7.3e-09 Score=98.65 Aligned_cols=59 Identities=20% Similarity=0.199 Sum_probs=47.8
Q ss_pred chHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcc
Q psy11730 274 CTFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPN 332 (496)
Q Consensus 274 ~~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~ 332 (496)
....|...|.... ...+++|||||||||.++..+++.++.+|+|+|+|+.|++.++++.
T Consensus 21 g~~kL~~~L~~~~~~~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~ 80 (232)
T 3opn_A 21 GGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSD 80 (232)
T ss_dssp THHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTC
T ss_pred cHHHHHHHHHHcCCCCCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhC
Confidence 3455666666543 3567899999999999999999998789999999999998876543
No 191
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.71 E-value=2.2e-08 Score=94.53 Aligned_cols=97 Identities=13% Similarity=0.131 Sum_probs=71.4
Q ss_pred chHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCC-CceEEEecc
Q psy11730 274 CTFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNL-EKCKFYHGD 349 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~-~~v~~~~~d 349 (496)
....++..+...... ++.+|||||||+|..++.+++.. ..+|+++|+|+++++.|+++....+ .. .+++++.+|
T Consensus 40 ~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~~i~~~~gd 117 (221)
T 3dr5_A 40 MTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAG--YSPSRVRFLLSR 117 (221)
T ss_dssp HHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSC
T ss_pred HHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCcCcEEEEEcC
Confidence 334455555544322 24599999999999999999853 3799999999999999987654332 23 589999999
Q ss_pred cCCccccC-CCceeEEEEcccccc
Q psy11730 350 WGSLSAVI-HSKFDIILTSETIYS 372 (496)
Q Consensus 350 ~~~~~~~~-~~~fD~Ii~~~~l~~ 372 (496)
+.+..... .++||+|++......
T Consensus 118 a~~~l~~~~~~~fD~V~~d~~~~~ 141 (221)
T 3dr5_A 118 PLDVMSRLANDSYQLVFGQVSPMD 141 (221)
T ss_dssp HHHHGGGSCTTCEEEEEECCCTTT
T ss_pred HHHHHHHhcCCCcCeEEEcCcHHH
Confidence 87765433 579999999765443
No 192
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.70 E-value=2.5e-08 Score=94.29 Aligned_cols=83 Identities=22% Similarity=0.122 Sum_probs=69.2
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
..+.+|||||||+|.+++.+. +..+|+|+|+++.|++.++..... ...+..+..+|....+. .+.||+|++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~----~g~~~~~~v~D~~~~~~--~~~~DvvLll 175 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFARE----KDWDFTFALQDVLCAPP--AEAGDLALIF 175 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHH----TTCEEEEEECCTTTSCC--CCBCSEEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHh----cCCCceEEEeecccCCC--CCCcchHHHH
Confidence 357899999999999999977 778999999999999999877432 24678889999887665 5799999999
Q ss_pred cccccccchHh
Q psy11730 368 ETIYSVANYNK 378 (496)
Q Consensus 368 ~~l~~~~~~~~ 378 (496)
-+++++++.+.
T Consensus 176 k~lh~LE~q~~ 186 (253)
T 3frh_A 176 KLLPLLEREQA 186 (253)
T ss_dssp SCHHHHHHHST
T ss_pred HHHHHhhhhch
Confidence 99999965544
No 193
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.70 E-value=1.9e-08 Score=101.51 Aligned_cols=97 Identities=10% Similarity=0.067 Sum_probs=76.1
Q ss_pred CCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
+.+|||||||+|.++..+++..+ .+++++|+ +.+++.++++.... ....++++..+|+.+.+....+.||+|++..
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~ 256 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAH--DLGGRVEFFEKNLLDARNFEGGAADVVMLND 256 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHT--TCGGGEEEEECCTTCGGGGTTCCEEEEEEES
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhc--CCCCceEEEeCCcccCcccCCCCccEEEEec
Confidence 67999999999999999998766 68999999 88998887654322 2345799999999887522256799999999
Q ss_pred ccccccch--HhHhhee--eecCCC
Q psy11730 369 TIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
++|++++. ..+++.. .|.|++
T Consensus 257 vlh~~~~~~~~~~l~~~~~~L~pgG 281 (352)
T 3mcz_A 257 CLHYFDAREAREVIGHAAGLVKPGG 281 (352)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEEEEE
T ss_pred ccccCCHHHHHHHHHHHHHHcCCCC
Confidence 99999765 6666652 566654
No 194
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.70 E-value=1.1e-08 Score=99.91 Aligned_cols=91 Identities=18% Similarity=0.037 Sum_probs=64.4
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEE--ecc
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFY--HGD 349 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~--~~d 349 (496)
...+..|...+......++.+|||||||+|.++..+++. .+|+|+|+++ |+..++++... ......++.|+ .+|
T Consensus 65 sR~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~-~~~~~~~v~~~~~~~D 140 (276)
T 2wa2_A 65 SRGTAKLAWIDERGGVELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRL-VETFGWNLITFKSKVD 140 (276)
T ss_dssp CHHHHHHHHHHHTTSCCCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCC-CCCTTGGGEEEECSCC
T ss_pred chHHHHHHHHHHcCCCCCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhh-hhhcCCCeEEEeccCc
Confidence 334555666555533345789999999999999998888 6899999998 64433332111 01112378999 899
Q ss_pred cCCccccCCCceeEEEEccc
Q psy11730 350 WGSLSAVIHSKFDIILTSET 369 (496)
Q Consensus 350 ~~~~~~~~~~~fD~Ii~~~~ 369 (496)
+.+++ +++||+|+|+.+
T Consensus 141 ~~~l~---~~~fD~Vvsd~~ 157 (276)
T 2wa2_A 141 VTKME---PFQADTVLCDIG 157 (276)
T ss_dssp GGGCC---CCCCSEEEECCC
T ss_pred HhhCC---CCCcCEEEECCC
Confidence 88865 578999999877
No 195
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.70 E-value=1.3e-08 Score=98.94 Aligned_cols=93 Identities=17% Similarity=0.072 Sum_probs=65.4
Q ss_pred cchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEE--eccc
Q psy11730 273 ECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFY--HGDW 350 (496)
Q Consensus 273 ~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~--~~d~ 350 (496)
.++..|...+......++.+|||||||+|.++..+++. .+|+|||+++ |+..+++.... ......++.++ ++|+
T Consensus 58 R~a~KL~~i~~~~~~~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~-~~~~~~~v~~~~~~~D~ 133 (265)
T 2oxt_A 58 RGTAKLAWMEERGYVELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRI-TESYGWNIVKFKSRVDI 133 (265)
T ss_dssp THHHHHHHHHHHTSCCCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCC-CCBTTGGGEEEECSCCT
T ss_pred hHHHHHHHHHHcCCCCCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhh-hhccCCCeEEEecccCH
Confidence 34556666666633345789999999999999998887 6899999998 54333322111 01112378999 8999
Q ss_pred CCccccCCCceeEEEEccccccc
Q psy11730 351 GSLSAVIHSKFDIILTSETIYSV 373 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~~~ 373 (496)
.+++ +++||+|+|+.+ ++.
T Consensus 134 ~~l~---~~~fD~V~sd~~-~~~ 152 (265)
T 2oxt_A 134 HTLP---VERTDVIMCDVG-ESS 152 (265)
T ss_dssp TTSC---CCCCSEEEECCC-CCC
T ss_pred hHCC---CCCCcEEEEeCc-ccC
Confidence 8865 578999999876 443
No 196
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.69 E-value=9.2e-09 Score=96.77 Aligned_cols=96 Identities=13% Similarity=-0.013 Sum_probs=69.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC-----Cce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH-----SKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~f 361 (496)
++.+|||||||+|..++.+++.. ..+|+++|+|+.+++.++++....+ ...+++++.+|+.+...... ++|
T Consensus 64 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 64 QAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAG--LSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred CCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCC--CCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 57799999999999999999863 4799999999999999987654332 23569999999866432212 789
Q ss_pred eEEEEccccccccchHhHhhee--eecCCC
Q psy11730 362 DIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
|+|++.... .+...+++.. .|.|++
T Consensus 142 D~v~~~~~~---~~~~~~l~~~~~~L~pgG 168 (225)
T 3tr6_A 142 DLIYIDADK---ANTDLYYEESLKLLREGG 168 (225)
T ss_dssp EEEEECSCG---GGHHHHHHHHHHHEEEEE
T ss_pred cEEEECCCH---HHHHHHHHHHHHhcCCCc
Confidence 999987653 3334444431 455554
No 197
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.69 E-value=3e-08 Score=95.15 Aligned_cols=93 Identities=18% Similarity=0.207 Sum_probs=70.1
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc-c-CCeEEEEeCCHHHHHHhcCccccc-ccCCCCceEEEecccCCccccCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN-G-AAHVSFQDYNQEVIESLTLPNILM-NTDNLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~-~-~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
.++.+|||+|||+|.++..+++. + ..+|+++|+|+.+++.++++.... + ..++++..+|+.+.+.. .++||+|
T Consensus 95 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g---~~~v~~~~~d~~~~~~~-~~~~D~v 170 (258)
T 2pwy_A 95 APGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ---VENVRFHLGKLEEAELE-EAAYDGV 170 (258)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC---CCCEEEEESCGGGCCCC-TTCEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC---CCCEEEEECchhhcCCC-CCCcCEE
Confidence 35789999999999999999987 5 479999999999999998765332 2 46899999999876432 4789999
Q ss_pred EEccccccccchHhHhhee--eecCCC
Q psy11730 365 LTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++. +++..+++.. .|.|++
T Consensus 171 ~~~~-----~~~~~~l~~~~~~L~~gG 192 (258)
T 2pwy_A 171 ALDL-----MEPWKVLEKAALALKPDR 192 (258)
T ss_dssp EEES-----SCGGGGHHHHHHHEEEEE
T ss_pred EECC-----cCHHHHHHHHHHhCCCCC
Confidence 9843 3444555432 455544
No 198
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.69 E-value=2.1e-08 Score=97.74 Aligned_cols=92 Identities=11% Similarity=0.247 Sum_probs=68.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-c-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-G-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.++++..... ...++++..+|+.+... .++||+|++
T Consensus 110 ~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--g~~~v~~~~~d~~~~~~--~~~fD~Vi~ 185 (275)
T 1yb2_A 110 PGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFY--DIGNVRTSRSDIADFIS--DQMYDAVIA 185 (275)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTS--CCTTEEEECSCTTTCCC--SCCEEEEEE
T ss_pred CcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcC--CCCcEEEEECchhccCc--CCCccEEEE
Confidence 4779999999999999999887 3 4799999999999999887653320 14689999999887322 578999999
Q ss_pred ccccccccchHhHhhee--eecCCC
Q psy11730 367 SETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+ ++++..+++.. .|.|++
T Consensus 186 ~-----~~~~~~~l~~~~~~LkpgG 205 (275)
T 1yb2_A 186 D-----IPDPWNHVQKIASMMKPGS 205 (275)
T ss_dssp C-----CSCGGGSHHHHHHTEEEEE
T ss_pred c-----CcCHHHHHHHHHHHcCCCC
Confidence 3 44555555542 455554
No 199
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.69 E-value=8.2e-08 Score=91.18 Aligned_cols=114 Identities=12% Similarity=0.089 Sum_probs=76.1
Q ss_pred eeeecchH-HHHHHHHhCCC---C-CCCeEEEecCcCCHHHHHHHHc-c-CCeEEEEeCCHHHHHHhcCcccccccCCCC
Q psy11730 269 YKIWECTF-DLLNFIKDNVA---V-DKLSVLDVGCGAGLLGLYTLMN-G-AAHVSFQDYNQEVIESLTLPNILMNTDNLE 341 (496)
Q Consensus 269 ~~~~~~~~-~l~~~l~~~~~---~-~~~~VLDlGcGtG~~~~~la~~-~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~ 341 (496)
|+.|.... .++..|..... + +|.+|||||||+|.++..+++. + .++|+|+|+|+.|++.+.+.+.. ..
T Consensus 51 yr~w~~~~skla~~ll~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~-----r~ 125 (232)
T 3id6_C 51 YREWNAFRSKLAGAILKGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQR-----RP 125 (232)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHH-----CT
T ss_pred hhhhchHHHHHHHHHHhhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhh-----cC
Confidence 66675533 45566655433 3 4789999999999999999875 3 36999999999986543322211 24
Q ss_pred ceEEEecccCCcccc--CCCceeEEEEccccccccchHhHhh-e--eeecCCCC
Q psy11730 342 KCKFYHGDWGSLSAV--IHSKFDIILTSETIYSVANYNKLLT-V--WCLFPTHT 390 (496)
Q Consensus 342 ~v~~~~~d~~~~~~~--~~~~fD~Ii~~~~l~~~~~~~~~~~-~--~~l~p~~~ 390 (496)
|+.++.+|+...... ..+.||+|+++.+. ++...++. . ..|.|+|.
T Consensus 126 nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~ 176 (232)
T 3id6_C 126 NIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGD 176 (232)
T ss_dssp TEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEE
T ss_pred CeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeE
Confidence 799999998765421 24689999998664 34433332 2 24667653
No 200
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.69 E-value=1.6e-08 Score=95.83 Aligned_cols=96 Identities=13% Similarity=0.196 Sum_probs=71.2
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC--CCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--HSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~Ii 365 (496)
++.+|||||||+|..+..+++.. ..+|+++|+|+.+++.|+++....+ ...++.+..+|+.+..... .+.||+|+
T Consensus 54 ~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 54 APARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALG--LESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTT--CTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred CCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 57799999999999999999876 3799999999999999987653322 2357999999988753322 46899999
Q ss_pred EccccccccchHhHhhee--eecCCC
Q psy11730 366 TSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+..+.. +...+++.. .|.|++
T Consensus 132 ~~~~~~---~~~~~l~~~~~~L~pgG 154 (233)
T 2gpy_A 132 IDAAKG---QYRRFFDMYSPMVRPGG 154 (233)
T ss_dssp EEGGGS---CHHHHHHHHGGGEEEEE
T ss_pred ECCCHH---HHHHHHHHHHHHcCCCe
Confidence 987754 444444431 445544
No 201
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.68 E-value=1.5e-08 Score=95.29 Aligned_cols=96 Identities=13% Similarity=0.035 Sum_probs=69.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC----CCcee
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI----HSKFD 362 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD 362 (496)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.++++....+ ...+++++.+|+.+..... .+.||
T Consensus 58 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 58 GARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERAN--LNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp TCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred CCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 57899999999999999999874 3689999999999999887654322 3356999999987543211 15799
Q ss_pred EEEEccccccccchHhHhhe--eeecCCC
Q psy11730 363 IILTSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 363 ~Ii~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
+|++..... ....+++. ..|.|++
T Consensus 136 ~v~~d~~~~---~~~~~l~~~~~~L~pgG 161 (223)
T 3duw_A 136 FIFIDADKQ---NNPAYFEWALKLSRPGT 161 (223)
T ss_dssp EEEECSCGG---GHHHHHHHHHHTCCTTC
T ss_pred EEEEcCCcH---HHHHHHHHHHHhcCCCc
Confidence 999987643 33344443 1455554
No 202
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.68 E-value=5.6e-09 Score=100.14 Aligned_cols=89 Identities=13% Similarity=0.124 Sum_probs=69.6
Q ss_pred HHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 278 LLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 278 l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
+++.+.+...+ ++.+|||||||+|.++..+++.+ .+|+|+|+|+.|++.++++.. ...+++++++|+.+++..
T Consensus 17 ~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~-----~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 17 VLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLK-----LNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp THHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTT-----TCSEEEECCSCCTTTTCC
T ss_pred HHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhc-----cCCceEEEECChhhcCcc
Confidence 44555554443 57799999999999999999887 789999999999998877642 246899999999987753
Q ss_pred CCCceeEEEEccccccc
Q psy11730 357 IHSKFDIILTSETIYSV 373 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~ 373 (496)
..++| .|+++.+++..
T Consensus 91 ~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 91 NKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp CSSEE-EEEEECCSSSC
T ss_pred cCCCc-EEEEeCCcccc
Confidence 23678 88888886654
No 203
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=98.67 E-value=1.7e-08 Score=98.48 Aligned_cols=125 Identities=13% Similarity=0.038 Sum_probs=83.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc---CCCcee
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV---IHSKFD 362 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD 362 (496)
.++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.++++....+ ..+++++.+|+.++... ..+.||
T Consensus 82 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g---~~~v~~~~~D~~~~~~~~~~~~~~fD 158 (274)
T 3ajd_A 82 REDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMG---VLNTIIINADMRKYKDYLLKNEIFFD 158 (274)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEESCHHHHHHHHHHTTCCEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhC---CCcEEEEeCChHhcchhhhhccccCC
Confidence 35789999999999999999874 33799999999999999887654332 45899999998876542 156899
Q ss_pred EEEEccccccc------------------cchHhHhhe--eeecCCCCCcccEEEeeccCCcccccccchhhHhcC
Q psy11730 363 IILTSETIYSV------------------ANYNKLLTV--WCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYP 418 (496)
Q Consensus 363 ~Ii~~~~l~~~------------------~~~~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (496)
+|+++.+.... .....+++. ..+.|+|. +++.............+.++...++
T Consensus 159 ~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~---lv~stcs~~~~ene~~v~~~l~~~~ 231 (274)
T 3ajd_A 159 KILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGE---LVYSTCSMEVEENEEVIKYILQKRN 231 (274)
T ss_dssp EEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEE---EEEEESCCCTTSSHHHHHHHHHHCS
T ss_pred EEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCE---EEEEECCCChHHhHHHHHHHHHhCC
Confidence 99998665432 223344443 25666653 3443332233334555666655444
No 204
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.67 E-value=3.6e-08 Score=94.38 Aligned_cols=80 Identities=14% Similarity=0.163 Sum_probs=62.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccc---cC--CCCceEEEecccCC-ccc-cCCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMN---TD--NLEKCKFYHGDWGS-LSA-VIHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~---~~--~~~~v~~~~~d~~~-~~~-~~~~~ 360 (496)
++.+|||||||+|.+++.+++.++ ..|+|+|+|+.|++.++++..... .. ...++.++.+|+.+ ++. ...+.
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 467999999999999999999887 589999999999999877643321 00 34689999999887 432 22578
Q ss_pred eeEEEEcc
Q psy11730 361 FDIILTSE 368 (496)
Q Consensus 361 fD~Ii~~~ 368 (496)
+|.|+...
T Consensus 129 ~d~v~~~~ 136 (246)
T 2vdv_E 129 LSKMFFCF 136 (246)
T ss_dssp EEEEEEES
T ss_pred cCEEEEEC
Confidence 99998654
No 205
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.67 E-value=2.2e-08 Score=102.97 Aligned_cols=83 Identities=25% Similarity=0.279 Sum_probs=67.3
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCC-CCceEEEecccCCccccC---CCceeE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDN-LEKCKFYHGDWGSLSAVI---HSKFDI 363 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~-~~~v~~~~~d~~~~~~~~---~~~fD~ 363 (496)
.++++|||+|||+|.+++.+++.|..+|+|+|+|+.+++.|+++...++ . ..+++|+.+|+.+..... ...||+
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ng--l~~~~v~~~~~D~~~~~~~~~~~~~~fD~ 296 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNK--LDLSKAEFVRDDVFKLLRTYRDRGEKFDV 296 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcC--CCccceEEEECCHHHHHHHHHhcCCCCCE
Confidence 3688999999999999999999888899999999999999987764332 1 228999999988764321 368999
Q ss_pred EEEcccccc
Q psy11730 364 ILTSETIYS 372 (496)
Q Consensus 364 Ii~~~~l~~ 372 (496)
|+++++...
T Consensus 297 Ii~dpP~~~ 305 (396)
T 3c0k_A 297 IVMDPPKFV 305 (396)
T ss_dssp EEECCSSTT
T ss_pred EEECCCCCC
Confidence 999987643
No 206
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.67 E-value=5.6e-08 Score=91.46 Aligned_cols=86 Identities=19% Similarity=0.113 Sum_probs=66.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-C-CeEEEEeCCHHHHHHhcCccccccc--CCCCceEEEecccCCccccCCCceeE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-A-AHVSFQDYNQEVIESLTLPNILMNT--DNLEKCKFYHGDWGSLSAVIHSKFDI 363 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~-~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~~fD~ 363 (496)
.++.+|||||||+|..+..+++.. . .+|+|+|+|+.+++.++++....+. ....++.+..+|+...... .+.||+
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~fD~ 154 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE-EAPYDA 154 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG-GCCEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc-CCCcCE
Confidence 357899999999999999998874 4 5999999999999998876533210 0135799999998765432 568999
Q ss_pred EEEcccccccc
Q psy11730 364 ILTSETIYSVA 374 (496)
Q Consensus 364 Ii~~~~l~~~~ 374 (496)
|++..+++++.
T Consensus 155 i~~~~~~~~~~ 165 (226)
T 1i1n_A 155 IHVGAAAPVVP 165 (226)
T ss_dssp EEECSBBSSCC
T ss_pred EEECCchHHHH
Confidence 99998887663
No 207
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.66 E-value=3.8e-08 Score=100.11 Aligned_cols=95 Identities=17% Similarity=0.124 Sum_probs=74.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.++..+++..+ .+++++|+ +.+++.++++....+ ...+++|..+|+.+. . ...||+|++.
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~-~--~~~~D~v~~~ 255 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAG--LADRVTVAEGDFFKP-L--PVTADVVLLS 255 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTT--CTTTEEEEECCTTSC-C--SCCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCc-C--CCCCCEEEEe
Confidence 467999999999999999998875 68999999 999999887653322 234899999998752 2 2349999999
Q ss_pred cccccccchH--hHhhee--eecCCC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
.++|++++.. .+++.. .|.|++
T Consensus 256 ~vl~~~~~~~~~~~l~~~~~~L~pgG 281 (374)
T 1qzz_A 256 FVLLNWSDEDALTILRGCVRALEPGG 281 (374)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCc
Confidence 9999998775 566652 566654
No 208
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.66 E-value=2.2e-08 Score=95.58 Aligned_cols=90 Identities=14% Similarity=0.104 Sum_probs=67.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHc----c-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc---cccCCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN----G-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL---SAVIHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~----~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~ 360 (496)
++.+|||||||+|..+..+++. + ..+|+|||+|++|++.|+. ...+++++++|+.+. +.....+
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~--------~~~~v~~~~gD~~~~~~l~~~~~~~ 152 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS--------DMENITLHQGDCSDLTTFEHLREMA 152 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG--------GCTTEEEEECCSSCSGGGGGGSSSC
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc--------cCCceEEEECcchhHHHHHhhccCC
Confidence 4679999999999999999886 3 3799999999999887761 136899999999885 3322347
Q ss_pred eeEEEEccccccccchHhHhhee---eecCCC
Q psy11730 361 FDIILTSETIYSVANYNKLLTVW---CLFPTH 389 (496)
Q Consensus 361 fD~Ii~~~~l~~~~~~~~~~~~~---~l~p~~ 389 (496)
||+|++... | .+...++..+ .|.|++
T Consensus 153 fD~I~~d~~--~-~~~~~~l~~~~r~~LkpGG 181 (236)
T 2bm8_A 153 HPLIFIDNA--H-ANTFNIMKWAVDHLLEEGD 181 (236)
T ss_dssp SSEEEEESS--C-SSHHHHHHHHHHHTCCTTC
T ss_pred CCEEEECCc--h-HhHHHHHHHHHHhhCCCCC
Confidence 999998665 3 2566666642 466665
No 209
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=98.66 E-value=1.2e-08 Score=105.03 Aligned_cols=82 Identities=23% Similarity=0.169 Sum_probs=67.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc---CCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV---IHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~Ii 365 (496)
++++|||+|||+|.+++.+++.|..+|+|+|+|+.+++.|+++...++ ...+++|+.+|+.+.... ...+||+|+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~--~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNG--VEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC--CCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 678999999999999999999888899999999999999987764432 123899999998776432 146899999
Q ss_pred Ecccccc
Q psy11730 366 TSETIYS 372 (496)
Q Consensus 366 ~~~~l~~ 372 (496)
++++.+.
T Consensus 295 ~dpP~~~ 301 (396)
T 2as0_A 295 LDPPAFV 301 (396)
T ss_dssp ECCCCSC
T ss_pred ECCCCCC
Confidence 9988654
No 210
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.66 E-value=2.7e-08 Score=99.59 Aligned_cols=104 Identities=21% Similarity=0.114 Sum_probs=77.9
Q ss_pred HHHHhCCCCCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC
Q psy11730 280 NFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH 358 (496)
Q Consensus 280 ~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 358 (496)
..+.+..++.+.+|||||||+|.++..+++..+ .+++++|+ +.+++.++++....+ ...++++..+|+.+ +. .
T Consensus 158 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~-~~--~ 231 (334)
T 2ip2_A 158 HEIPRLLDFRGRSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLL--AGERVSLVGGDMLQ-EV--P 231 (334)
T ss_dssp HHHHHHSCCTTCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHH--HTTSEEEEESCTTT-CC--C
T ss_pred HHHHHhCCCCCCEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcC--CCCcEEEecCCCCC-CC--C
Confidence 334333343448999999999999999998765 68999999 999999887643221 23579999999877 32 4
Q ss_pred CceeEEEEccccccccchH--hHhhee--eecCCC
Q psy11730 359 SKFDIILTSETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
+.||+|++..++|++++.. .+++.. .|.|++
T Consensus 232 ~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG 266 (334)
T 2ip2_A 232 SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDG 266 (334)
T ss_dssp SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTC
T ss_pred CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCC
Confidence 6799999999999987665 666653 556654
No 211
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.65 E-value=1.5e-08 Score=94.50 Aligned_cols=95 Identities=17% Similarity=0.143 Sum_probs=69.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
++++|||||||+|..++.+++.. ..+|+++|+|+.+++.|+++....+ ...+++++.+|+.+......+ ||+|++
T Consensus 56 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~-fD~v~~ 132 (210)
T 3c3p_A 56 QPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNG--LIDRVELQVGDPLGIAAGQRD-IDILFM 132 (210)
T ss_dssp CCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHS--GGGGEEEEESCHHHHHTTCCS-EEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCceEEEEEecHHHHhccCCC-CCEEEE
Confidence 56799999999999999998864 3689999999999999987654322 235799999998765332246 999999
Q ss_pred ccccccccchHhHhhee--eecCCC
Q psy11730 367 SETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.... .+...+++.. .|.|++
T Consensus 133 ~~~~---~~~~~~l~~~~~~LkpgG 154 (210)
T 3c3p_A 133 DCDV---FNGADVLERMNRCLAKNA 154 (210)
T ss_dssp ETTT---SCHHHHHHHHGGGEEEEE
T ss_pred cCCh---hhhHHHHHHHHHhcCCCe
Confidence 7442 3444555442 455554
No 212
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.65 E-value=3.3e-08 Score=98.89 Aligned_cols=96 Identities=18% Similarity=0.222 Sum_probs=74.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.++..+++..+ .+++++|++ .+++.++++....+ ...+++|..+|+.+.+. ...||+|++.
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--~~~~D~v~~~ 239 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQG--VASRYHTIAGSAFEVDY--GNDYDLVLLP 239 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHT--CGGGEEEEESCTTTSCC--CSCEEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcC--CCcceEEEecccccCCC--CCCCcEEEEc
Confidence 567999999999999999998754 689999999 99999887643322 23479999999987643 3459999999
Q ss_pred cccccccch--HhHhhee--eecCCC
Q psy11730 368 ETIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
.+++++++. ..+++.. .+.|++
T Consensus 240 ~~l~~~~~~~~~~~l~~~~~~L~pgG 265 (335)
T 2r3s_A 240 NFLHHFDVATCEQLLRKIKTALAVEG 265 (335)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred chhccCCHHHHHHHHHHHHHhCCCCc
Confidence 999999544 5666652 455654
No 213
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.65 E-value=7e-08 Score=98.24 Aligned_cols=105 Identities=14% Similarity=0.153 Sum_probs=79.3
Q ss_pred HHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 279 LNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 279 ~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
+..+.+..+. .+.+|||||||+|.++..+++..+ .+++++|+ +.+++.++++.... +...+++|..+|+.+ +.
T Consensus 191 ~~~l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~l~~~v~~~~~d~~~-~~- 265 (369)
T 3gwz_A 191 AGQVAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGR--GLADRCEILPGDFFE-TI- 265 (369)
T ss_dssp HHHHHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTT-CC-
T ss_pred HHHHHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhc--CcCCceEEeccCCCC-CC-
Confidence 3444444443 467999999999999999998866 68999999 99999988765332 234689999999873 22
Q ss_pred CCCceeEEEEccccccccchH--hHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
...||+|++..+++++++.. .+++.. .|.|++
T Consensus 266 -p~~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG 301 (369)
T 3gwz_A 266 -PDGADVYLIKHVLHDWDDDDVVRILRRIATAMKPDS 301 (369)
T ss_dssp -CSSCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTC
T ss_pred -CCCceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCC
Confidence 23899999999999998876 566652 555654
No 214
>4diq_A Lysine-specific demethylase NO66; structural genomics, structural genomics consortium, SGC, HI demethylase, oxidoreductase; HET: PD2; 2.40A {Homo sapiens}
Probab=98.65 E-value=9.2e-08 Score=98.95 Aligned_cols=38 Identities=24% Similarity=0.413 Sum_probs=32.4
Q ss_pred CchhhhccCCceeeeCCcceEEEEeee--eeEEEeecccC
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLD--TTVAVTQNFCS 467 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~--~~i~v~~~~~~ 467 (496)
..++++++|||+||||.||||++.+++ .|+.+|+.+..
T Consensus 226 p~~e~~L~pGDvLYiP~g~~H~~~s~~~~~SlhlTi~~~~ 265 (489)
T 4diq_A 226 PVLQTVLEPGDLLYFPRGFIHQAECQDGVHSLHLTLSTYQ 265 (489)
T ss_dssp CSEEEEECTTCEEEECTTCEEEEEBCSSCCEEEEEEEECT
T ss_pred cceEEEECCCCEEEECCCCceEEEecCCCceEEEeecccC
Confidence 457899999999999999999999995 57777776543
No 215
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.65 E-value=5.3e-09 Score=100.26 Aligned_cols=96 Identities=18% Similarity=0.109 Sum_probs=70.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC-----CCce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI-----HSKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~f 361 (496)
++++|||||||+|..++.+++.. ..+|+++|+++++++.|+++....+ ...+++++.+|+.+..... .++|
T Consensus 60 ~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 60 RAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAK--QEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp TCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTT--CTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred CcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 57899999999999999999864 3799999999999988876653322 3468999999987754432 4789
Q ss_pred eEEEEccccccccchHhHhhe--eeecCCC
Q psy11730 362 DIILTSETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
|+|++.... .+...+++. ..|.|+|
T Consensus 138 D~V~~d~~~---~~~~~~l~~~~~~LkpGG 164 (242)
T 3r3h_A 138 DFIFIDADK---TNYLNYYELALKLVTPKG 164 (242)
T ss_dssp EEEEEESCG---GGHHHHHHHHHHHEEEEE
T ss_pred eEEEEcCCh---HHhHHHHHHHHHhcCCCe
Confidence 999997653 333344433 1455554
No 216
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.65 E-value=3.6e-08 Score=92.84 Aligned_cols=84 Identities=14% Similarity=0.127 Sum_probs=66.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC------CeEEEEeCCHHHHHHhcCccccccc--CCCCceEEEecccCCcc----cc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA------AHVSFQDYNQEVIESLTLPNILMNT--DNLEKCKFYHGDWGSLS----AV 356 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~------~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~v~~~~~d~~~~~----~~ 356 (496)
++.+|||||||+|.++..+++... .+|+|+|+++.+++.++++....+. ....++++..+|+.+.. ..
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 578999999999999999988753 5899999999999999876533220 01457999999988753 22
Q ss_pred CCCceeEEEEccccccc
Q psy11730 357 IHSKFDIILTSETIYSV 373 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~ 373 (496)
.++||+|++..+++++
T Consensus 160 -~~~fD~I~~~~~~~~~ 175 (227)
T 2pbf_A 160 -LGLFDAIHVGASASEL 175 (227)
T ss_dssp -HCCEEEEEECSBBSSC
T ss_pred -CCCcCEEEECCchHHH
Confidence 4789999999998876
No 217
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.65 E-value=7.7e-09 Score=100.08 Aligned_cols=82 Identities=15% Similarity=0.118 Sum_probs=62.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCH-------HHHHHhcCcccccccCCCCceEEEecccCCccc-cCC--
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQ-------EVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIH-- 358 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~-------~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~-- 358 (496)
++.+|||+|||+|.+++.++..+ .+|+|+|+|+ .+++.++++...++ ...+++++++|+.++.. ..+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g-~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~--~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLG-LTVTAFEQHPAVACLLSDGIRRALLNPETQD--TAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTT-CCEEEEECCHHHHHHHHHHHHHHHHSHHHHH--HHTTEEEEESCHHHHHHHHHHHH
T ss_pred CcCeEEEeeCccCHHHHHHHHhC-CEEEEEECChhhhHHHHHHHHHHHhHHHhhC--CccCeEEEECCHHHHHHhhhccC
Confidence 46799999999999999999875 5899999999 99998876543222 12359999999987533 212
Q ss_pred CceeEEEEccccccc
Q psy11730 359 SKFDIILTSETIYSV 373 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~ 373 (496)
++||+|++++++.+.
T Consensus 160 ~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 160 GKPDIVYLDPMYPER 174 (258)
T ss_dssp CCCSEEEECCCC---
T ss_pred CCccEEEECCCCCCc
Confidence 689999999988664
No 218
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.64 E-value=6.1e-08 Score=98.17 Aligned_cols=103 Identities=13% Similarity=0.080 Sum_probs=77.9
Q ss_pred HHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC
Q psy11730 281 FIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH 358 (496)
Q Consensus 281 ~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 358 (496)
.+.+... .++.+|||||||+|.++..+++..+ .+++++|+ +.+++.++++....+ ...+++++.+|+.+.+.
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~--- 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKG--VADRMRGIAVDIYKESY--- 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTT--CTTTEEEEECCTTTSCC---
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcC--CCCCEEEEeCccccCCC---
Confidence 3333333 3467999999999999999998865 68999999 999999887653322 23469999999987643
Q ss_pred CceeEEEEccccccccc--hHhHhhee--eecCCC
Q psy11730 359 SKFDIILTSETIYSVAN--YNKLLTVW--CLFPTH 389 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~~~--~~~~~~~~--~l~p~~ 389 (496)
..+|+|++..+++++++ ...+++.. .|.|++
T Consensus 255 ~~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG 289 (359)
T 1x19_A 255 PEADAVLFCRILYSANEQLSTIMCKKAFDAMRSGG 289 (359)
T ss_dssp CCCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTC
T ss_pred CCCCEEEEechhccCCHHHHHHHHHHHHHhcCCCC
Confidence 23499999999999987 66677652 555654
No 219
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.64 E-value=7.1e-08 Score=92.53 Aligned_cols=100 Identities=12% Similarity=0.072 Sum_probs=72.0
Q ss_pred HHHhCCC-CCCCeEEEecCcCCHHHHHHHHc-c-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 281 FIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN-G-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 281 ~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~-~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
.+..... .++.+|||+|||+|.++..+++. + ..+|+|+|+|+.+++.|+++....+ ...++++..+|+.+...
T Consensus 84 ~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~~-- 159 (255)
T 3mb5_A 84 LIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAG--FDDRVTIKLKDIYEGIE-- 159 (255)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHT--CTTTEEEECSCGGGCCC--
T ss_pred HHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcC--CCCceEEEECchhhccC--
Confidence 3333333 35789999999999999999987 5 4799999999999999987654332 23459999999886532
Q ss_pred CCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 358 HSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.++||+|+++.+ ++..+++.. .|.|++
T Consensus 160 ~~~~D~v~~~~~-----~~~~~l~~~~~~L~~gG 188 (255)
T 3mb5_A 160 EENVDHVILDLP-----QPERVVEHAAKALKPGG 188 (255)
T ss_dssp CCSEEEEEECSS-----CGGGGHHHHHHHEEEEE
T ss_pred CCCcCEEEECCC-----CHHHHHHHHHHHcCCCC
Confidence 578999999643 344444431 455554
No 220
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.63 E-value=4e-08 Score=108.09 Aligned_cols=92 Identities=12% Similarity=0.068 Sum_probs=71.7
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
....++... .++++|||+|||+|.+++.++..|+.+|+++|+|+.+++.++++...++ ....+++++++|+.+....
T Consensus 529 ~~r~~l~~~--~~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ng-l~~~~v~~i~~D~~~~l~~ 605 (703)
T 3v97_A 529 IARRMLGQM--SKGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNG-LTGRAHRLIQADCLAWLRE 605 (703)
T ss_dssp HHHHHHHHH--CTTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT-CCSTTEEEEESCHHHHHHH
T ss_pred HHHHHHHHh--cCCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcC-CCccceEEEecCHHHHHHh
Confidence 334444432 3688999999999999999999888899999999999999987764432 2225899999998875433
Q ss_pred CCCceeEEEEccccc
Q psy11730 357 IHSKFDIILTSETIY 371 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~ 371 (496)
..++||+|+++++..
T Consensus 606 ~~~~fD~Ii~DPP~f 620 (703)
T 3v97_A 606 ANEQFDLIFIDPPTF 620 (703)
T ss_dssp CCCCEEEEEECCCSB
T ss_pred cCCCccEEEECCccc
Confidence 357899999988753
No 221
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.63 E-value=5.4e-08 Score=97.41 Aligned_cols=94 Identities=14% Similarity=-0.010 Sum_probs=74.3
Q ss_pred CCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
..+|||||||+|.++..+++..+ .+++++|+ +.+++.++++.... +...+++|..+|+.+ +. ...||+|++..
T Consensus 170 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~--~~~~~v~~~~~d~~~-~~--p~~~D~v~~~~ 243 (332)
T 3i53_A 170 LGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDT--GLSGRAQVVVGSFFD-PL--PAGAGGYVLSA 243 (332)
T ss_dssp GSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHT--TCTTTEEEEECCTTS-CC--CCSCSEEEEES
T ss_pred CCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhc--CcCcCeEEecCCCCC-CC--CCCCcEEEEeh
Confidence 57999999999999999988765 68999999 99999988764332 234689999999873 22 23899999999
Q ss_pred ccccccch--HhHhhee--eecCCC
Q psy11730 369 TIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 369 ~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
++|++++. ..++++. .|.|++
T Consensus 244 vlh~~~~~~~~~~l~~~~~~L~pgG 268 (332)
T 3i53_A 244 VLHDWDDLSAVAILRRCAEAAGSGG 268 (332)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHTTTC
T ss_pred hhccCCHHHHHHHHHHHHHhcCCCC
Confidence 99999885 6666653 566665
No 222
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.63 E-value=2.3e-08 Score=96.01 Aligned_cols=97 Identities=16% Similarity=0.077 Sum_probs=71.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC------CCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI------HSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~ 360 (496)
++++|||||||+|..++.+++.. ..+|+++|+|+.+++.|+++....+ ...+++++.+|+.+..... .++
T Consensus 79 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 79 NAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAG--VDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp TCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred CcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 57799999999999999999864 3799999999999999987654322 2458999999987653221 478
Q ss_pred eeEEEEccccccccchHhHhhe--eeecCCCC
Q psy11730 361 FDIILTSETIYSVANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 361 fD~Ii~~~~l~~~~~~~~~~~~--~~l~p~~~ 390 (496)
||+|++.... .+...+++. ..|.|++.
T Consensus 157 fD~V~~d~~~---~~~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 157 YDFIFVDADK---DNYLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp BSEEEECSCS---TTHHHHHHHHHHHBCTTCC
T ss_pred EEEEEEcCch---HHHHHHHHHHHHhCCCCeE
Confidence 9999997653 334444443 14566653
No 223
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.62 E-value=9.2e-08 Score=88.13 Aligned_cols=86 Identities=19% Similarity=0.296 Sum_probs=63.8
Q ss_pred chHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHcc---CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecc
Q psy11730 274 CTFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNG---AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~---~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d 349 (496)
++..|.+.+.....+ ++.+|||||||+|.++..+++.. ..+|+|+|+|+.+ ...+++++++|
T Consensus 6 ~~~kl~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------------~~~~v~~~~~d 71 (201)
T 2plw_A 6 AAYKLIELDNKYLFLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------------PIPNVYFIQGE 71 (201)
T ss_dssp THHHHHHHHHHHCCCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------------CCTTCEEEECC
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------------CCCCceEEEcc
Confidence 455666666554433 46799999999999999999875 3789999999831 13468889999
Q ss_pred cCCccc------------------------cCCCceeEEEEccccccc
Q psy11730 350 WGSLSA------------------------VIHSKFDIILTSETIYSV 373 (496)
Q Consensus 350 ~~~~~~------------------------~~~~~fD~Ii~~~~l~~~ 373 (496)
+.+... ....+||+|+++.++++.
T Consensus 72 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~ 119 (201)
T 2plw_A 72 IGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCI 119 (201)
T ss_dssp TTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred ccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCC
Confidence 887650 124689999998887763
No 224
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.62 E-value=3.2e-08 Score=97.72 Aligned_cols=78 Identities=17% Similarity=0.174 Sum_probs=63.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC----CCceeE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI----HSKFDI 363 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~fD~ 363 (496)
++.+|||+|||+|.++..+++.. ..+|+|+|.|+.|++.|+++....+ .+++++++|+.+++... ...||.
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g----~~v~~v~~d~~~l~~~l~~~g~~~~D~ 101 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFS----DRVSLFKVSYREADFLLKTLGIEKVDG 101 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGT----TTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcC----CcEEEEECCHHHHHHHHHhcCCCCCCE
Confidence 57899999999999999999876 4799999999999999987654321 58999999998875321 158999
Q ss_pred EEEcccc
Q psy11730 364 ILTSETI 370 (496)
Q Consensus 364 Ii~~~~l 370 (496)
|+++..+
T Consensus 102 Vl~D~gv 108 (301)
T 1m6y_A 102 ILMDLGV 108 (301)
T ss_dssp EEEECSC
T ss_pred EEEcCcc
Confidence 9997754
No 225
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=98.61 E-value=6.4e-08 Score=97.28 Aligned_cols=84 Identities=19% Similarity=0.084 Sum_probs=67.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++.+|||+|||+|.+++. ++ ++.+|+|+|+|+.+++.++++...++ ...+++++++|+.+.. +.||+|++++
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~--l~~~v~~~~~D~~~~~----~~fD~Vi~dp 266 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNK--LEHKIIPILSDVREVD----VKGNRVIMNL 266 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTT--CTTTEEEEESCGGGCC----CCEEEEEECC
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEECChHHhc----CCCcEEEECC
Confidence 678999999999999999 77 77899999999999999987764433 2357999999988765 7899999987
Q ss_pred ccccccchHhHh
Q psy11730 369 TIYSVANYNKLL 380 (496)
Q Consensus 369 ~l~~~~~~~~~~ 380 (496)
+.....-...+.
T Consensus 267 P~~~~~~l~~~~ 278 (336)
T 2yx1_A 267 PKFAHKFIDKAL 278 (336)
T ss_dssp TTTGGGGHHHHH
T ss_pred cHhHHHHHHHHH
Confidence 765443333333
No 226
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.60 E-value=1.1e-07 Score=90.44 Aligned_cols=100 Identities=17% Similarity=0.125 Sum_probs=72.1
Q ss_pred HHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCC
Q psy11730 281 FIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHS 359 (496)
Q Consensus 281 ~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~ 359 (496)
.+..... .++.+|||+|||+|.++..+++. ..+|+++|+++.+++.++++....+ ...++++..+|+.+.... .+
T Consensus 82 ~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~--~~~~~~~~~~d~~~~~~~-~~ 157 (248)
T 2yvl_A 82 YIALKLNLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFN--LGKNVKFFNVDFKDAEVP-EG 157 (248)
T ss_dssp HHHHHTTCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTT--CCTTEEEECSCTTTSCCC-TT
T ss_pred HHHHhcCCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcC--CCCcEEEEEcChhhcccC-CC
Confidence 3333333 35789999999999999999988 6799999999999999887653321 236799999998875422 56
Q ss_pred ceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 360 KFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 360 ~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.||+|+++.+ ++..+++.. .|.|++
T Consensus 158 ~~D~v~~~~~-----~~~~~l~~~~~~L~~gG 184 (248)
T 2yvl_A 158 IFHAAFVDVR-----EPWHYLEKVHKSLMEGA 184 (248)
T ss_dssp CBSEEEECSS-----CGGGGHHHHHHHBCTTC
T ss_pred cccEEEECCc-----CHHHHHHHHHHHcCCCC
Confidence 8999998543 444444431 455554
No 227
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.60 E-value=4.4e-08 Score=95.68 Aligned_cols=82 Identities=20% Similarity=0.107 Sum_probs=65.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccc-cCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMN-TDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.+++|||||||+|.++..+++. +..+|+++|+++.+++.|+++....+ ....++++++.+|+.+......++||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5789999999999999998887 55899999999999999987653321 123578999999987643333578999999
Q ss_pred cccc
Q psy11730 367 SETI 370 (496)
Q Consensus 367 ~~~l 370 (496)
+.+.
T Consensus 155 d~~~ 158 (275)
T 1iy9_A 155 DSTE 158 (275)
T ss_dssp SCSS
T ss_pred CCCC
Confidence 7654
No 228
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.60 E-value=3.1e-08 Score=92.39 Aligned_cols=86 Identities=17% Similarity=0.188 Sum_probs=65.3
Q ss_pred HHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC
Q psy11730 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI 357 (496)
Q Consensus 278 l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 357 (496)
+++.+... .++.+|||||||+|.++..++ .+|+|+|+|+. ++.+..+|+.+++..
T Consensus 58 ~~~~l~~~--~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~------------------~~~~~~~d~~~~~~~- 112 (215)
T 2zfu_A 58 IARDLRQR--PASLVVADFGCGDCRLASSIR----NPVHCFDLASL------------------DPRVTVCDMAQVPLE- 112 (215)
T ss_dssp HHHHHHTS--CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS------------------STTEEESCTTSCSCC-
T ss_pred HHHHHhcc--CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC------------------CceEEEeccccCCCC-
Confidence 44555432 356799999999999988863 68999999976 356688898886543
Q ss_pred CCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 358 HSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+++||+|++..++++ .++..+++.. .|.|+|
T Consensus 113 ~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG 145 (215)
T 2zfu_A 113 DESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGG 145 (215)
T ss_dssp TTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEE
T ss_pred CCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCe
Confidence 578999999999975 7888887763 566655
No 229
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.60 E-value=4.5e-08 Score=95.98 Aligned_cols=83 Identities=14% Similarity=0.166 Sum_probs=64.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCccccccc-CCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNT-DNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++++|||||||+|.++..+++.. ..+|+++|+++.+++.|+++....+. ....+++++.+|+.+......++||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 357899999999999999998875 47999999999999999876533211 1246899999998775432257899999
Q ss_pred Ecccc
Q psy11730 366 TSETI 370 (496)
Q Consensus 366 ~~~~l 370 (496)
++.+.
T Consensus 157 ~d~~~ 161 (283)
T 2i7c_A 157 VDSSD 161 (283)
T ss_dssp EECCC
T ss_pred EcCCC
Confidence 96543
No 230
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=98.60 E-value=6.5e-08 Score=99.21 Aligned_cols=79 Identities=19% Similarity=0.150 Sum_probs=62.2
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
++++|||+|||+|.+++.+++.|+. |+|+|+|+.|++.++++...++. . ..+.++|+.+......+.||+|++++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga~-V~avDis~~al~~a~~n~~~ng~---~-~~~~~~D~~~~l~~~~~~fD~Ii~dp 288 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGAY-ALAVDKDLEALGVLDQAALRLGL---R-VDIRHGEALPTLRGLEGPFHHVLLDP 288 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTCE-EEEEESCHHHHHHHHHHHHHHTC---C-CEEEESCHHHHHHTCCCCEEEEEECC
T ss_pred CCCeEEEcccchhHHHHHHHHcCCe-EEEEECCHHHHHHHHHHHHHhCC---C-CcEEEccHHHHHHHhcCCCCEEEECC
Confidence 4889999999999999999998876 99999999999999887644432 1 34668888775433234599999998
Q ss_pred cccc
Q psy11730 369 TIYS 372 (496)
Q Consensus 369 ~l~~ 372 (496)
+...
T Consensus 289 P~f~ 292 (393)
T 4dmg_A 289 PTLV 292 (393)
T ss_dssp CCCC
T ss_pred CcCC
Confidence 8633
No 231
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.59 E-value=5.5e-08 Score=96.87 Aligned_cols=78 Identities=14% Similarity=0.114 Sum_probs=64.2
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||+|||+|..+..+++.. ..+|+|+|+|+.+++.++++....+ ..+++++++|+.+++.. .+.||+|+
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g---~~~v~~~~~D~~~~~~~-~~~fD~Il 192 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLG---VLNVILFHSSSLHIGEL-NVEFDKIL 192 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHT---CCSEEEESSCGGGGGGG-CCCEEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhC---CCeEEEEECChhhcccc-cccCCEEE
Confidence 357899999999999999999864 3789999999999999887754432 45799999999887653 57899999
Q ss_pred Eccc
Q psy11730 366 TSET 369 (496)
Q Consensus 366 ~~~~ 369 (496)
++.+
T Consensus 193 ~d~P 196 (315)
T 1ixk_A 193 LDAP 196 (315)
T ss_dssp EECC
T ss_pred EeCC
Confidence 9755
No 232
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.59 E-value=3.9e-08 Score=96.18 Aligned_cols=91 Identities=13% Similarity=0.065 Sum_probs=68.4
Q ss_pred HHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccCCe---EEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 276 FDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGAAH---VSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 276 ~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~~~---v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
..+++.|.+... .++.+|||||||+|.++..+++.+..+ |+|+|+++.|++.++++. ..+++++++|+.
T Consensus 28 ~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-------~~~v~~i~~D~~ 100 (279)
T 3uzu_A 28 HGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-------GELLELHAGDAL 100 (279)
T ss_dssp HHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-------GGGEEEEESCGG
T ss_pred HHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-------CCCcEEEECChh
Confidence 345555555544 357899999999999999999887543 999999999999998762 357999999999
Q ss_pred CccccC--C-C--ceeEEEEccccccc
Q psy11730 352 SLSAVI--H-S--KFDIILTSETIYSV 373 (496)
Q Consensus 352 ~~~~~~--~-~--~fD~Ii~~~~l~~~ 373 (496)
+++... + . ..+.|++|.+++-.
T Consensus 101 ~~~~~~~~~~~~~~~~~vv~NlPY~is 127 (279)
T 3uzu_A 101 TFDFGSIARPGDEPSLRIIGNLPYNIS 127 (279)
T ss_dssp GCCGGGGSCSSSSCCEEEEEECCHHHH
T ss_pred cCChhHhcccccCCceEEEEccCcccc
Confidence 876531 1 1 34578888887654
No 233
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=98.58 E-value=9.5e-08 Score=99.01 Aligned_cols=85 Identities=21% Similarity=0.272 Sum_probs=67.5
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
.|.+.+.+ ..++.+|||+|||+|.+++.+++. ..+|+|+|+|+.|++.|+++...++ .. ++|+.+|+.++..
T Consensus 280 ~l~~~~~~--~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ng---l~-v~~~~~d~~~~~~- 351 (425)
T 2jjq_A 280 NLVRKVSE--LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINN---VD-AEFEVASDREVSV- 351 (425)
T ss_dssp HHHHHHHH--HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHT---CC-EEEEECCTTTCCC-
T ss_pred HHHHHhhc--cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcC---Cc-EEEEECChHHcCc-
Confidence 44555554 335789999999999999998886 4689999999999999987654332 33 9999999998753
Q ss_pred CCCceeEEEEccccc
Q psy11730 357 IHSKFDIILTSETIY 371 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~ 371 (496)
..||+|+++++..
T Consensus 352 --~~fD~Vv~dPPr~ 364 (425)
T 2jjq_A 352 --KGFDTVIVDPPRA 364 (425)
T ss_dssp --TTCSEEEECCCTT
T ss_pred --cCCCEEEEcCCcc
Confidence 3899999998853
No 234
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.58 E-value=1.2e-07 Score=96.91 Aligned_cols=93 Identities=18% Similarity=0.148 Sum_probs=73.9
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccC---------------------------------------Ce
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGA---------------------------------------AH 314 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~---------------------------------------~~ 314 (496)
...|+..|...... ++..|||+|||+|.+++.++..+. .+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 34566666666554 477999999999999999887643 36
Q ss_pred EEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccc
Q psy11730 315 VSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 315 v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
|+|+|+++.|++.|+.+....+ ...+++|.++|+.++.. ...||+|++++++.
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~g--l~~~i~~~~~D~~~l~~--~~~~D~Iv~NPPyg 312 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAG--VDEYIEFNVGDATQFKS--EDEFGFIITNPPYG 312 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHT--CGGGEEEEECCGGGCCC--SCBSCEEEECCCCC
T ss_pred EEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhcCc--CCCCcEEEECCCCc
Confidence 9999999999999998764433 23479999999998765 46899999999975
No 235
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.58 E-value=8.8e-08 Score=93.22 Aligned_cols=96 Identities=17% Similarity=0.104 Sum_probs=69.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc-c-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN-G-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~-~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|+++..........++++..+|+.+.+.. .+.||+|+
T Consensus 98 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~-~~~~D~v~ 176 (280)
T 1i9g_A 98 FPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELP-DGSVDRAV 176 (280)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCC-TTCEEEEE
T ss_pred CCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCC-CCceeEEE
Confidence 35779999999999999999885 4 479999999999999988764322001245899999999877543 57899999
Q ss_pred EccccccccchHhHhhee--eecCCC
Q psy11730 366 TSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 366 ~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
++. +++..+++.. .|.|++
T Consensus 177 ~~~-----~~~~~~l~~~~~~L~pgG 197 (280)
T 1i9g_A 177 LDM-----LAPWEVLDAVSRLLVAGG 197 (280)
T ss_dssp EES-----SCGGGGHHHHHHHEEEEE
T ss_pred ECC-----cCHHHHHHHHHHhCCCCC
Confidence 943 3444444432 455554
No 236
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.58 E-value=4.9e-08 Score=95.60 Aligned_cols=80 Identities=23% Similarity=0.205 Sum_probs=64.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccC--------CCCceEEEecccCCccccCCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD--------NLEKCKFYHGDWGSLSAVIHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~--------~~~~v~~~~~d~~~~~~~~~~~ 360 (496)
.+++|||||||+|.++..+++.+..+|+++|+++.+++.|+++. ..+.. ...+++++.+|+.+.... .++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~ 152 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRG 152 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCC
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-cCC
Confidence 57899999999999999998886679999999999999998765 32111 356899999998764333 578
Q ss_pred eeEEEEcccc
Q psy11730 361 FDIILTSETI 370 (496)
Q Consensus 361 fD~Ii~~~~l 370 (496)
||+|+++.+.
T Consensus 153 fD~Ii~d~~~ 162 (281)
T 1mjf_A 153 FDVIIADSTD 162 (281)
T ss_dssp EEEEEEECCC
T ss_pred eeEEEECCCC
Confidence 9999997664
No 237
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.57 E-value=9e-08 Score=96.70 Aligned_cols=85 Identities=19% Similarity=0.198 Sum_probs=69.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.+.+|||||||+|.++..+++..+ .+++++|+ +.|++.+++. .+++|..+|+.+ +. . .||+|++.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~---------~~v~~~~~d~~~-~~--p-~~D~v~~~ 253 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS---------NNLTYVGGDMFT-SI--P-NADAVLLK 253 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB---------TTEEEEECCTTT-CC--C-CCSEEEEE
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC---------CCcEEEeccccC-CC--C-CccEEEee
Confidence 457999999999999999998765 68999999 9999887652 359999999865 32 2 39999999
Q ss_pred cccccccchH--hHhhee--eecC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFP 387 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p 387 (496)
.++|++++.+ .++++. .|.|
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p 277 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTN 277 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSG
T ss_pred hhhccCCHHHHHHHHHHHHHhCCC
Confidence 9999998887 777663 5666
No 238
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.56 E-value=6.7e-08 Score=95.75 Aligned_cols=83 Identities=19% Similarity=0.104 Sum_probs=64.5
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCccccc-ccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILM-NTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
..+++|||||||+|.++..+++... .+|+++|+++.+++.|+++.... +.....+++++.+|+.+......++||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4578999999999999999988754 79999999999999998765331 111256899999998764332357899999
Q ss_pred Ecccc
Q psy11730 366 TSETI 370 (496)
Q Consensus 366 ~~~~l 370 (496)
++.+.
T Consensus 174 ~d~~~ 178 (304)
T 2o07_A 174 TDSSD 178 (304)
T ss_dssp EECC-
T ss_pred ECCCC
Confidence 97654
No 239
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=98.56 E-value=4.6e-08 Score=100.11 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=65.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---CCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI---HSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~fD~Ii 365 (496)
++.+|||+|||+|.+++.+++. ..+|+|+|+|+.+++.|+++...++ ..+++|+.+|+.+..... ..+||+|+
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~---~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii 284 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNG---LGNVRVLEANAFDLLRRLEKEGERFDLVV 284 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTT---CTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcC---CCCceEEECCHHHHHHHHHhcCCCeeEEE
Confidence 6789999999999999999887 7789999999999999987754432 445999999988764321 46899999
Q ss_pred Ecccccc
Q psy11730 366 TSETIYS 372 (496)
Q Consensus 366 ~~~~l~~ 372 (496)
++++.+.
T Consensus 285 ~dpP~~~ 291 (382)
T 1wxx_A 285 LDPPAFA 291 (382)
T ss_dssp ECCCCSC
T ss_pred ECCCCCC
Confidence 9887644
No 240
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.56 E-value=5.2e-08 Score=96.20 Aligned_cols=81 Identities=16% Similarity=0.121 Sum_probs=63.2
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccc-cCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMN-TDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~-~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.+++|||||||+|.++..+++. +..+|+++|+++.+++.|+++....+ .....+++++.+|+.+......++||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999887 45899999999999999987653311 112468999999987643323578999998
Q ss_pred ccc
Q psy11730 367 SET 369 (496)
Q Consensus 367 ~~~ 369 (496)
+.+
T Consensus 170 d~~ 172 (296)
T 1inl_A 170 DST 172 (296)
T ss_dssp EC-
T ss_pred cCC
Confidence 654
No 241
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.55 E-value=1.1e-07 Score=96.20 Aligned_cols=95 Identities=18% Similarity=0.164 Sum_probs=73.7
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++.+|||||||+|.++..+++.++ .+++++|+ +.+++.++++....+ ...+++|+.+|+.+.. ...||+|++.
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~---~~~~D~v~~~ 256 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEG--LSDRVDVVEGDFFEPL---PRKADAIILS 256 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTT--CTTTEEEEECCTTSCC---SSCEEEEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcC--CCCceEEEeCCCCCCC---CCCccEEEEc
Confidence 467999999999999999998876 68999999 999999887653322 2348999999987522 2359999999
Q ss_pred cccccccchH--hHhhee--eecCCC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
.++|++++.+ .+++.. .|.|++
T Consensus 257 ~vl~~~~~~~~~~~l~~~~~~L~pgG 282 (360)
T 1tw3_A 257 FVLLNWPDHDAVRILTRCAEALEPGG 282 (360)
T ss_dssp SCGGGSCHHHHHHHHHHHHHTEEEEE
T ss_pred ccccCCCHHHHHHHHHHHHHhcCCCc
Confidence 9999997764 566552 555654
No 242
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.55 E-value=1e-07 Score=89.95 Aligned_cols=85 Identities=13% Similarity=0.070 Sum_probs=65.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-------CeEEEEeCCHHHHHHhcCccccccc--CCCCceEEEecccCCccccCCC
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-------AHVSFQDYNQEVIESLTLPNILMNT--DNLEKCKFYHGDWGSLSAVIHS 359 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-------~~v~giD~s~~~i~~a~~~~~~~~~--~~~~~v~~~~~d~~~~~~~~~~ 359 (496)
++.+|||||||+|.++..+++... .+|+++|+++.+++.++++....+. ....++++..+|..+... ..+
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~ 162 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP-PNA 162 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG-GGC
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC-cCC
Confidence 577999999999999999988532 5899999999999998876532210 003478999999876322 137
Q ss_pred ceeEEEEcccccccc
Q psy11730 360 KFDIILTSETIYSVA 374 (496)
Q Consensus 360 ~fD~Ii~~~~l~~~~ 374 (496)
.||+|++..+++++.
T Consensus 163 ~fD~I~~~~~~~~~~ 177 (227)
T 1r18_A 163 PYNAIHVGAAAPDTP 177 (227)
T ss_dssp SEEEEEECSCBSSCC
T ss_pred CccEEEECCchHHHH
Confidence 899999999988874
No 243
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.55 E-value=7.2e-08 Score=92.88 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=65.1
Q ss_pred HHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCe--EEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 277 DLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAH--VSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 277 ~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~--v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
.+++.|.+...+ ++.+|||||||+|.++. ++. + .+ |+|+|+++.|++.++++... ..+++++++|+.++
T Consensus 8 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~-----~~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 8 FVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFL-----GPKLTIYQQDAMTF 79 (252)
T ss_dssp HHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTT-----GGGEEEECSCGGGC
T ss_pred HHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhcc-----CCceEEEECchhhC
Confidence 344555554443 47799999999999999 654 3 45 99999999999999876522 25899999999887
Q ss_pred cccCC----CceeEEEEcccccc
Q psy11730 354 SAVIH----SKFDIILTSETIYS 372 (496)
Q Consensus 354 ~~~~~----~~fD~Ii~~~~l~~ 372 (496)
+.... +..|+|+++.+++-
T Consensus 80 ~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 80 NFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp CHHHHHHHHTSCEEEEEECCTTT
T ss_pred CHHHhhcccCCceEEEECCCCCc
Confidence 54210 23578999988754
No 244
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.54 E-value=8.6e-08 Score=88.35 Aligned_cols=84 Identities=14% Similarity=0.142 Sum_probs=63.8
Q ss_pred ecchHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
-.+++.|.+.+.....+ ++.+|||||||+|.++..+++. ..+|+|+|+++.. ...+++++++|+
T Consensus 7 ~Ra~~KL~ei~~~~~~~~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~--------------~~~~v~~~~~D~ 71 (191)
T 3dou_A 7 SRAAFKLEFLLDRYRVVRKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME--------------EIAGVRFIRCDI 71 (191)
T ss_dssp SHHHHHHHHHHHHHCCSCTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC--------------CCTTCEEEECCT
T ss_pred CcHHHHHHHHHHHcCCCCCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc--------------cCCCeEEEEccc
Confidence 34566777777765443 5789999999999999999888 6789999999731 235799999998
Q ss_pred CCcccc------CC----CceeEEEEcccc
Q psy11730 351 GSLSAV------IH----SKFDIILTSETI 370 (496)
Q Consensus 351 ~~~~~~------~~----~~fD~Ii~~~~l 370 (496)
.+.... .. ++||+|+++.+.
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~ 101 (191)
T 3dou_A 72 FKETIFDDIDRALREEGIEKVDDVVSDAMA 101 (191)
T ss_dssp TSSSHHHHHHHHHHHHTCSSEEEEEECCCC
T ss_pred cCHHHHHHHHHHhhcccCCcceEEecCCCc
Confidence 875421 01 489999997654
No 245
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.54 E-value=1.6e-07 Score=95.69 Aligned_cols=87 Identities=20% Similarity=0.150 Sum_probs=71.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.+.+|||||||+|.++..+++.++ .+++++|+ +.|++.+++ ..+++++.+|+.+ +. .. ||+|++.
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~--~~-~D~v~~~ 274 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPP---------LSGIEHVGGDMFA-SV--PQ-GDAMILK 274 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CC--CC-EEEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhh---------cCCCEEEeCCccc-CC--CC-CCEEEEe
Confidence 367999999999999999998876 68999999 999987764 2469999999877 32 23 9999999
Q ss_pred cccccccchH--hHhhee--eecCCC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
.++||+++.+ .++++. .|.|++
T Consensus 275 ~~lh~~~d~~~~~~l~~~~~~L~pgG 300 (372)
T 1fp1_D 275 AVCHNWSDEKCIEFLSNCHKALSPNG 300 (372)
T ss_dssp SSGGGSCHHHHHHHHHHHHHHEEEEE
T ss_pred cccccCCHHHHHHHHHHHHHhcCCCC
Confidence 9999998887 777663 566654
No 246
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.54 E-value=3.9e-08 Score=100.82 Aligned_cols=81 Identities=15% Similarity=0.119 Sum_probs=64.3
Q ss_pred CCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-CCCceeEEEEcc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-IHSKFDIILTSE 368 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~Ii~~~ 368 (496)
|.+|||+|||+|..++.+++.+ .+|+|+|+|+.|++.|+.+...... +..+++++++|+.+.... ....||+|++++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~-gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLN-EGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSC-TTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhcc-CCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 7899999999999999988775 5899999999999999887643310 136899999999875321 135899999988
Q ss_pred cccc
Q psy11730 369 TIYS 372 (496)
Q Consensus 369 ~l~~ 372 (496)
+...
T Consensus 172 Prr~ 175 (410)
T 3ll7_A 172 ARRS 175 (410)
T ss_dssp EEC-
T ss_pred CCcC
Confidence 7654
No 247
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.54 E-value=5.4e-08 Score=92.91 Aligned_cols=84 Identities=11% Similarity=0.028 Sum_probs=68.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
...+|||||||+|.+++.++... ..+|+|+|+++.|++.++.+...+ ..+..+...|...-+. .+.||+|++.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~----g~~~~~~v~D~~~~~p--~~~~DvaL~l 205 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRL----NVPHRTNVADLLEDRL--DEPADVTLLL 205 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHT----TCCEEEEECCTTTSCC--CSCCSEEEET
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhc----CCCceEEEeeecccCC--CCCcchHHHH
Confidence 36799999999999999988774 479999999999999998876443 2347788888765543 6889999999
Q ss_pred cccccccchHh
Q psy11730 368 ETIYSVANYNK 378 (496)
Q Consensus 368 ~~l~~~~~~~~ 378 (496)
-+++++++.++
T Consensus 206 kti~~Le~q~k 216 (281)
T 3lcv_B 206 KTLPCLETQQR 216 (281)
T ss_dssp TCHHHHHHHST
T ss_pred HHHHHhhhhhh
Confidence 99999976543
No 248
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.53 E-value=5.4e-08 Score=98.84 Aligned_cols=98 Identities=14% Similarity=0.105 Sum_probs=71.1
Q ss_pred HHHHHhCCCCCCCeEEEecCc------CCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 279 LNFIKDNVAVDKLSVLDVGCG------AGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 279 ~~~l~~~~~~~~~~VLDlGcG------tG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
.+.+......++.+||||||| +|..++.+++.. ..+|+|+|+|+.|.. ...+++|+++|+
T Consensus 206 Ye~lL~~l~~~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~~------------~~~rI~fv~GDa 273 (419)
T 3sso_A 206 YDRHFRDYRNQQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSHV------------DELRIRTIQGDQ 273 (419)
T ss_dssp HHHHHGGGTTSCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGGG------------CBTTEEEEECCT
T ss_pred HHHHHHhhcCCCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHhh------------cCCCcEEEEecc
Confidence 333333333467899999999 777777777652 479999999999831 235899999999
Q ss_pred CCcccc-----CCCceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 351 GSLSAV-----IHSKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 351 ~~~~~~-----~~~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
.+++.. ..++||+|+++.. +++.+....++++ .|.|+|
T Consensus 274 ~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGG 318 (419)
T 3sso_A 274 NDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGG 318 (419)
T ss_dssp TCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEE
T ss_pred cccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCe
Confidence 987653 1478999999754 6677777777762 566655
No 249
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.53 E-value=2.1e-07 Score=93.28 Aligned_cols=82 Identities=16% Similarity=0.199 Sum_probs=61.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCccccc------cc--CCCCceEEEecccCCccc-c
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILM------NT--DNLEKCKFYHGDWGSLSA-V 356 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~------~~--~~~~~v~~~~~d~~~~~~-~ 356 (496)
.++.+|||+|||+|.++..+++. ++ .+|+|+|+++.+++.|+++.... |. ....++++..+|+.+... .
T Consensus 104 ~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~ 183 (336)
T 2b25_A 104 NPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDI 183 (336)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHccccc
Confidence 45789999999999999999987 56 79999999999999998765431 11 123689999999987642 1
Q ss_pred CCCceeEEEEccc
Q psy11730 357 IHSKFDIILTSET 369 (496)
Q Consensus 357 ~~~~fD~Ii~~~~ 369 (496)
..+.||+|+++.+
T Consensus 184 ~~~~fD~V~~~~~ 196 (336)
T 2b25_A 184 KSLTFDAVALDML 196 (336)
T ss_dssp ----EEEEEECSS
T ss_pred CCCCeeEEEECCC
Confidence 2468999999654
No 250
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.52 E-value=1.1e-07 Score=95.27 Aligned_cols=82 Identities=11% Similarity=0.107 Sum_probs=63.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCccccccc-CCCCceEEEecccCCcccc-CCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNT-DNLEKCKFYHGDWGSLSAV-IHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~-~~~~~v~~~~~d~~~~~~~-~~~~fD~I 364 (496)
..+++|||||||+|.++..+++... .+|+++|+|+.+++.|+++....+. ....+++++.+|+.+.... ..++||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 3568999999999999999988754 7999999999999999876543211 1246899999998765322 24789999
Q ss_pred EEccc
Q psy11730 365 LTSET 369 (496)
Q Consensus 365 i~~~~ 369 (496)
+++.+
T Consensus 199 i~d~~ 203 (334)
T 1xj5_A 199 IVDSS 203 (334)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99654
No 251
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.52 E-value=6.8e-08 Score=96.46 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCccccc-ccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILM-NTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.+++|||||||+|.++..+++.. ..+|+++|+|+.+++.|+++.... +.....+++++.+|+.+......++||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 56899999999999999998874 479999999999999998765331 1112468999999987643322578999999
Q ss_pred ccc
Q psy11730 367 SET 369 (496)
Q Consensus 367 ~~~ 369 (496)
+.+
T Consensus 196 d~~ 198 (321)
T 2pt6_A 196 DSS 198 (321)
T ss_dssp ECC
T ss_pred CCc
Confidence 753
No 252
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.52 E-value=8.1e-08 Score=95.17 Aligned_cols=87 Identities=20% Similarity=0.205 Sum_probs=61.4
Q ss_pred chHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeC----CHHHHHHhcCcccccccCCCCceEEEec-
Q psy11730 274 CTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDY----NQEVIESLTLPNILMNTDNLEKCKFYHG- 348 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~----s~~~i~~a~~~~~~~~~~~~~~v~~~~~- 348 (496)
.++.|.+.+......++.+|||||||+|.++..+++. ++|+|+|+ ++.+++.+... ....+++.|+.+
T Consensus 67 ~a~KL~~i~~~~~~~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~ 139 (305)
T 2p41_A 67 GSAKLRWFVERNLVTPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPIPMS-----TYGWNLVRLQSGV 139 (305)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCCCCC-----STTGGGEEEECSC
T ss_pred HHHHHHHHHHcCCCCCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHHHhh-----hcCCCCeEEEecc
Confidence 4556666665532334789999999999999999888 57999999 56544221111 111357899998
Q ss_pred ccCCccccCCCceeEEEEcccc
Q psy11730 349 DWGSLSAVIHSKFDIILTSETI 370 (496)
Q Consensus 349 d~~~~~~~~~~~fD~Ii~~~~l 370 (496)
|+..++ ..+||+|+|+.++
T Consensus 140 D~~~l~---~~~fD~V~sd~~~ 158 (305)
T 2p41_A 140 DVFFIP---PERCDTLLCDIGE 158 (305)
T ss_dssp CTTTSC---CCCCSEEEECCCC
T ss_pred ccccCC---cCCCCEEEECCcc
Confidence 887664 4689999997765
No 253
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.52 E-value=5e-08 Score=91.96 Aligned_cols=79 Identities=13% Similarity=-0.001 Sum_probs=62.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC--C---Cce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--H---SKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--~---~~f 361 (496)
++++|||||||+|..++.+++.. ..+|+++|+++.+++.++++....+ ...+++++.+|+.+..... . ++|
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAE--AEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTT--CTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCC--CCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 57899999999999999998864 4799999999999999887653322 2368999999986542211 1 689
Q ss_pred eEEEEccc
Q psy11730 362 DIILTSET 369 (496)
Q Consensus 362 D~Ii~~~~ 369 (496)
|+|++...
T Consensus 147 D~v~~d~~ 154 (229)
T 2avd_A 147 DVAVVDAD 154 (229)
T ss_dssp EEEEECSC
T ss_pred cEEEECCC
Confidence 99999766
No 254
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=98.52 E-value=2.6e-07 Score=94.73 Aligned_cols=92 Identities=10% Similarity=0.114 Sum_probs=71.8
Q ss_pred HHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC---------------------------------------CeE
Q psy11730 276 FDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA---------------------------------------AHV 315 (496)
Q Consensus 276 ~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~---------------------------------------~~v 315 (496)
..|+..|..... ..+..|||.+||+|.+++.++..+. .+|
T Consensus 187 e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 187 ETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 345555555444 3477999999999999999887554 359
Q ss_pred EEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccc
Q psy11730 316 SFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 316 ~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+|+|+|+.|++.|+.+....+ ...+++|.++|+.+++. ..+||+|++++++.
T Consensus 267 ~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~~~~--~~~fD~Iv~NPPYg 318 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAG--LGDLITFRQLQVADFQT--EDEYGVVVANPPYG 318 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTT--CTTCSEEEECCGGGCCC--CCCSCEEEECCCCC
T ss_pred EEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHhCCC--CCCCCEEEECCCCc
Confidence 999999999999988764432 33469999999998765 46899999999974
No 255
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.51 E-value=7.5e-08 Score=95.85 Aligned_cols=84 Identities=15% Similarity=0.113 Sum_probs=66.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccC--CCCceEEEecccCCccccCCCceeEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTD--NLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~--~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.+++|||||||+|.++..+++.. ..+|+++|+++.+++.|+++....+.+ ...+++++.+|+.+......++||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 56899999999999999998874 479999999999999998765332211 256899999998775332367899999
Q ss_pred Ecccccc
Q psy11730 366 TSETIYS 372 (496)
Q Consensus 366 ~~~~l~~ 372 (496)
++.+.+.
T Consensus 157 ~d~~~~~ 163 (314)
T 1uir_A 157 IDLTDPV 163 (314)
T ss_dssp EECCCCB
T ss_pred ECCCCcc
Confidence 9876544
No 256
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=98.51 E-value=2.8e-07 Score=96.86 Aligned_cols=125 Identities=17% Similarity=0.219 Sum_probs=86.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
++.+|||+|||+|..+..+++.. ...|+|+|+|+.+++.++++....+ ..++.++++|+.++.....+.||+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g---~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCG---ISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHT---CCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---CCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 57899999999999999998863 3789999999999999887754432 457999999998876433678999999
Q ss_pred ccccccc------cc----------------hHhHhhe--eeecCCCCCcccEEEeeccCCcccccccchhhHhcCC
Q psy11730 367 SETIYSV------AN----------------YNKLLTV--WCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYPR 419 (496)
Q Consensus 367 ~~~l~~~------~~----------------~~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (496)
+.+..-. ++ ...+++. ..|.|+|. +++.............+.++...++.
T Consensus 194 D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~---LvysTcs~~~~Ene~vv~~~l~~~~~ 267 (479)
T 2frx_A 194 DAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGT---LVYSTCTLNQEENEAVCLWLKETYPD 267 (479)
T ss_dssp ECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEE---EEEEESCCSSTTTHHHHHHHHHHSTT
T ss_pred CCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCE---EEEecccCCcccCHHHHHHHHHHCCC
Confidence 7654321 11 1123332 25667664 44444333333455667777776665
No 257
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=98.50 E-value=8.9e-08 Score=99.93 Aligned_cols=124 Identities=13% Similarity=0.055 Sum_probs=85.9
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
++.+|||+|||+|..+..+++... .+|+|+|+|+.+++.++++....+ .. +.++++|+.++.....+.||+|++
T Consensus 101 ~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G---~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 101 PGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWG---AP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp TTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHC---CC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC---Ce-EEEEECCHHHhhhhccccCCEEEE
Confidence 588999999999999999987633 689999999999999887754433 34 899999988776433688999998
Q ss_pred ccccccc------cch----------------HhHhhe--eeecCCCCCcccEEEeeccCCcccccccchhhHhcCC
Q psy11730 367 SETIYSV------ANY----------------NKLLTV--WCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYPR 419 (496)
Q Consensus 367 ~~~l~~~------~~~----------------~~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (496)
+.+..-. ++. ..+++. ..|.|+|. +++..-..........+.+|...++.
T Consensus 177 D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~---LvysTCs~~~eEne~vv~~~l~~~~~ 250 (464)
T 3m6w_A 177 DAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGV---LVYSTCTFAPEENEGVVAHFLKAHPE 250 (464)
T ss_dssp ECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEE---EEEEESCCCGGGTHHHHHHHHHHCTT
T ss_pred CCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcE---EEEEeccCchhcCHHHHHHHHHHCCC
Confidence 6664211 111 223332 25666654 45544433444566677788776653
No 258
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.50 E-value=9.9e-08 Score=94.91 Aligned_cols=81 Identities=22% Similarity=0.235 Sum_probs=64.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccC-CCCceEEEecccCCccccCCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTD-NLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~-~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
.+++|||||||+|.++..+++.. ..+|+++|+++.+++.|+++....+.+ ...+++++.+|+.+......++||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 56899999999999999998875 479999999999999998765332111 2568999999987643323578999999
Q ss_pred ccc
Q psy11730 367 SET 369 (496)
Q Consensus 367 ~~~ 369 (496)
+.+
T Consensus 188 d~~ 190 (314)
T 2b2c_A 188 DSS 190 (314)
T ss_dssp CCC
T ss_pred cCC
Confidence 764
No 259
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.49 E-value=2.5e-07 Score=93.24 Aligned_cols=100 Identities=18% Similarity=0.138 Sum_probs=71.4
Q ss_pred HHHhCCCC-CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC
Q psy11730 281 FIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH 358 (496)
Q Consensus 281 ~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 358 (496)
.+.+..++ .+.+|||||||+|.++..+++..+ .+++++|++ .++. +++... .....+++|..+|+.+ +. .
T Consensus 175 ~~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~--~~~~~~--~~~~~~v~~~~~d~~~-~~--p 246 (348)
T 3lst_A 175 ILARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRA-EVVA--RHRLDA--PDVAGRWKVVEGDFLR-EV--P 246 (348)
T ss_dssp HHHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECH-HHHT--TCCCCC--GGGTTSEEEEECCTTT-CC--C
T ss_pred HHHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCH-HHhh--cccccc--cCCCCCeEEEecCCCC-CC--C
Confidence 33333344 367999999999999999998776 589999994 5554 222111 1234679999999862 21 3
Q ss_pred CceeEEEEccccccccch--HhHhhee--eecCCC
Q psy11730 359 SKFDIILTSETIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 359 ~~fD~Ii~~~~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
+||+|++..++|++++. ..++++. .|.|++
T Consensus 247 -~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG 280 (348)
T 3lst_A 247 -HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHG 280 (348)
T ss_dssp -CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTC
T ss_pred -CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCC
Confidence 89999999999999887 4677663 566665
No 260
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.49 E-value=1.6e-07 Score=96.99 Aligned_cols=86 Identities=14% Similarity=0.085 Sum_probs=67.5
Q ss_pred hHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccC
Q psy11730 275 TFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351 (496)
Q Consensus 275 ~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~ 351 (496)
...+++++.+... .++.+|||+|||+|.+++.+++. ...+|+|+|+++.+++.| .+++++++|+.
T Consensus 24 P~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a------------~~~~~~~~D~~ 91 (421)
T 2ih2_A 24 PPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP------------PWAEGILADFL 91 (421)
T ss_dssp CHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC------------TTEEEEESCGG
T ss_pred CHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC------------CCCcEEeCChh
Confidence 3456666666554 35679999999999999999876 347999999999998765 36788999988
Q ss_pred CccccCCCceeEEEEcccccccc
Q psy11730 352 SLSAVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 352 ~~~~~~~~~fD~Ii~~~~l~~~~ 374 (496)
+... .+.||+|++++++....
T Consensus 92 ~~~~--~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 92 LWEP--GEAFDLILGNPPYGIVG 112 (421)
T ss_dssp GCCC--SSCEEEEEECCCCCCBS
T ss_pred hcCc--cCCCCEEEECcCccCcc
Confidence 7643 47899999999986553
No 261
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.48 E-value=2e-07 Score=85.44 Aligned_cols=84 Identities=23% Similarity=0.257 Sum_probs=59.5
Q ss_pred hHHHHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHc-cC---------CeEEEEeCCHHHHHHhcCcccccccCCCCce
Q psy11730 275 TFDLLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMN-GA---------AHVSFQDYNQEVIESLTLPNILMNTDNLEKC 343 (496)
Q Consensus 275 ~~~l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~-~~---------~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v 343 (496)
.+.|.+.......+ ++.+|||||||+|.++..+++. +. .+|+|+|+|+.+ ...++
T Consensus 7 ~~kl~~l~~~~~~~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~--------------~~~~~ 72 (196)
T 2nyu_A 7 AFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF--------------PLEGA 72 (196)
T ss_dssp HHHHHHHHHHHCCCCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC--------------CCTTC
T ss_pred HHHHHHHHHhcCCCCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc--------------cCCCC
Confidence 44555555544433 4789999999999999999987 43 689999999831 12467
Q ss_pred EEE-ecccCCccc-------cCCCceeEEEEcccccc
Q psy11730 344 KFY-HGDWGSLSA-------VIHSKFDIILTSETIYS 372 (496)
Q Consensus 344 ~~~-~~d~~~~~~-------~~~~~fD~Ii~~~~l~~ 372 (496)
+++ .+|+.+... ...++||+|+++.+++.
T Consensus 73 ~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~ 109 (196)
T 2nyu_A 73 TFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNA 109 (196)
T ss_dssp EEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCC
T ss_pred eEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCC
Confidence 888 888766432 11358999999765543
No 262
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=98.48 E-value=9.8e-08 Score=99.47 Aligned_cols=125 Identities=16% Similarity=0.131 Sum_probs=87.3
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||+|||+|..++.+++. +..+|+|+|+|+.+++.++++....+ ..++.++++|..++.....+.||+|+
T Consensus 104 ~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g---~~nv~v~~~Da~~l~~~~~~~FD~Il 180 (456)
T 3m4x_A 104 KPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWG---VSNAIVTNHAPAELVPHFSGFFDRIV 180 (456)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHT---CSSEEEECCCHHHHHHHHTTCEEEEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCceEEEeCCHHHhhhhccccCCEEE
Confidence 35889999999999999999875 33689999999999999887764443 45799999998877643368999999
Q ss_pred Ecccccccc----chH------------------hHhhe--eeecCCCCCcccEEEeeccCCcccccccchhhHhcC
Q psy11730 366 TSETIYSVA----NYN------------------KLLTV--WCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYP 418 (496)
Q Consensus 366 ~~~~l~~~~----~~~------------------~~~~~--~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 418 (496)
++.+..-.. +++ .++.. ..|.|+|. +++..-..........+.+|...++
T Consensus 181 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~---LvYsTCs~~~eEne~vv~~~l~~~~ 254 (456)
T 3m4x_A 181 VDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQ---LIYSTCTFAPEENEEIISWLVENYP 254 (456)
T ss_dssp EECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEE---EEEEESCCCGGGTHHHHHHHHHHSS
T ss_pred ECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcE---EEEEEeecccccCHHHHHHHHHhCC
Confidence 987642211 111 22322 15666654 4554444444456667778877665
No 263
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.48 E-value=9.5e-08 Score=91.07 Aligned_cols=96 Identities=16% Similarity=0.076 Sum_probs=69.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC------CCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI------HSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~------~~~ 360 (496)
++++|||||||+|..++.+++.. ..+|+++|+++.+++.|+++....+ ...+++++.+|+.+..... .++
T Consensus 70 ~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 70 NAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAG--VEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp TCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 57899999999999999999863 3799999999999999987653322 2457999999987653221 478
Q ss_pred eeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 361 FDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 361 fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
||+|++.... .+...+++.. .|.|++
T Consensus 148 fD~I~~d~~~---~~~~~~l~~~~~~L~pGG 175 (237)
T 3c3y_A 148 YDFGFVDADK---PNYIKYHERLMKLVKVGG 175 (237)
T ss_dssp EEEEEECSCG---GGHHHHHHHHHHHEEEEE
T ss_pred cCEEEECCch---HHHHHHHHHHHHhcCCCe
Confidence 9999997543 2334444431 455554
No 264
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.48 E-value=3.5e-07 Score=89.08 Aligned_cols=77 Identities=13% Similarity=0.094 Sum_probs=62.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii 365 (496)
.++.+|||+|||+|.+++.+++. ++ .+|+++|+|+.+++.|+++....+ ...++++..+|+.+.. ..+.||+|+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~v~~~~~d~~~~~--~~~~~D~V~ 186 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWG--LIERVTIKVRDISEGF--DEKDVDALF 186 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTT--CGGGEEEECCCGGGCC--SCCSEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHcc--cCCccCEEE
Confidence 35789999999999999999987 53 799999999999999887643321 2257999999988762 246899999
Q ss_pred Ecc
Q psy11730 366 TSE 368 (496)
Q Consensus 366 ~~~ 368 (496)
++.
T Consensus 187 ~~~ 189 (277)
T 1o54_A 187 LDV 189 (277)
T ss_dssp ECC
T ss_pred ECC
Confidence 964
No 265
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=98.48 E-value=7.5e-08 Score=91.42 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=68.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---C--Cce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI---H--SKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~--~~f 361 (496)
++++|||||||+|..++.+++..+ .+|+++|+|+.+++.|+++....+ ...+++++.+|+.+..... + ++|
T Consensus 72 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g--~~~~i~~~~~d~~~~l~~l~~~~~~~~f 149 (232)
T 3cbg_A 72 GAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAG--VAEKISLRLGPALATLEQLTQGKPLPEF 149 (232)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHT--CGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 567999999999999999998643 689999999999999887643322 2357999999976532111 2 789
Q ss_pred eEEEEccccccccchHhHhhee--eecCCC
Q psy11730 362 DIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
|+|++.... .+...+++.. .|.|++
T Consensus 150 D~V~~d~~~---~~~~~~l~~~~~~LkpgG 176 (232)
T 3cbg_A 150 DLIFIDADK---RNYPRYYEIGLNLLRRGG 176 (232)
T ss_dssp EEEEECSCG---GGHHHHHHHHHHTEEEEE
T ss_pred CEEEECCCH---HHHHHHHHHHHHHcCCCe
Confidence 999987653 3344444431 445544
No 266
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=98.47 E-value=4.4e-07 Score=92.72 Aligned_cols=93 Identities=12% Similarity=0.111 Sum_probs=72.3
Q ss_pred HHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC---------------------------------------CeE
Q psy11730 276 FDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA---------------------------------------AHV 315 (496)
Q Consensus 276 ~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~---------------------------------------~~v 315 (496)
..|+..|..... ..+..|||.+||+|.+.+.++..+. .+|
T Consensus 180 e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 180 ENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 456665555444 3577999999999999999886554 359
Q ss_pred EEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcccccc
Q psy11730 316 SFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 316 ~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~ 372 (496)
+|+|+++.|++.|+.+....+ ....++|.++|+.+++. ...||+|++++++..
T Consensus 260 ~GvDid~~al~~Ar~Na~~~g--l~~~I~~~~~D~~~l~~--~~~fD~Iv~NPPYG~ 312 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVG--LEDVVKLKQMRLQDFKT--NKINGVLISNPPYGE 312 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTT--CTTTEEEEECCGGGCCC--CCCSCEEEECCCCTT
T ss_pred EEEECCHHHHHHHHHHHHHcC--CCCceEEEECChHHCCc--cCCcCEEEECCchhh
Confidence 999999999999987764432 34469999999998765 468999999999753
No 267
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.47 E-value=1.3e-07 Score=89.92 Aligned_cols=96 Identities=14% Similarity=0.042 Sum_probs=68.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---------
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--------- 357 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--------- 357 (496)
++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|+++....+ ...++++..+|+.+.....
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g--~~~~v~~~~~d~~~~~~~~~~~~~~~~~ 137 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENG--LENKIFLKLGSALETLQVLIDSKSAPSW 137 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcC--CCCCEEEEECCHHHHHHHHHhhcccccc
Confidence 57899999999999999999875 4799999999999999887653322 2345999999976532110
Q ss_pred ------C-CceeEEEEccccccccchHhHhhee--eecCCC
Q psy11730 358 ------H-SKFDIILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 358 ------~-~~fD~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
. ++||+|++.....+ ...+++.. .|.|++
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~~~---~~~~l~~~~~~L~pgG 175 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADKEN---YPNYYPLILKLLKPGG 175 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCGGG---HHHHHHHHHHHEEEEE
T ss_pred cccccCCCCCcCEEEEeCCHHH---HHHHHHHHHHHcCCCe
Confidence 1 78999999865433 33444431 455544
No 268
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.46 E-value=5.6e-07 Score=91.52 Aligned_cols=97 Identities=18% Similarity=0.164 Sum_probs=72.9
Q ss_pred HHHHHhCCC-CC-CCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 279 LNFIKDNVA-VD-KLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 279 ~~~l~~~~~-~~-~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
+..+..... +. +.+|||||||+|.++..+++..+ .+++++|+ +.+++.++. ..+++|+.+|+.+ +.
T Consensus 191 ~~~~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~ 259 (368)
T 3reo_A 191 MKKILEMYNGFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPA---------FSGVEHLGGDMFD-GV 259 (368)
T ss_dssp HHHHHTTCCTTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CC
T ss_pred HHHHHHhcccccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhh---------cCCCEEEecCCCC-CC
Confidence 344444433 44 57999999999999999998776 68999999 999987664 2579999999886 33
Q ss_pred cCCCceeEEEEccccccccchH--hHhhee--eecCCC
Q psy11730 356 VIHSKFDIILTSETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
+ . . |+|++..++|++++.+ .++++. .|.|++
T Consensus 260 p-~-~-D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG 294 (368)
T 3reo_A 260 P-K-G-DAIFIKWICHDWSDEHCLKLLKNCYAALPDHG 294 (368)
T ss_dssp C-C-C-SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTC
T ss_pred C-C-C-CEEEEechhhcCCHHHHHHHHHHHHHHcCCCC
Confidence 2 2 3 9999999999997654 556653 556654
No 269
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.45 E-value=3.2e-07 Score=88.83 Aligned_cols=92 Identities=13% Similarity=0.021 Sum_probs=68.5
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccccc-ccCCCCceEEEecccCCccccCCCceeEEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILM-NTDNLEKCKFYHGDWGSLSAVIHSKFDIILT 366 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~-~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~ 366 (496)
..+++|||||||+|.++..+++.+ .+|+++|+++.|++.|+++.... +....++++++.+|..+.. ++||+|++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~----~~fD~Ii~ 145 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI----KKYDLIFC 145 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC----CCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH----hhCCEEEE
Confidence 356899999999999999988886 89999999999999998865321 1113468999999987654 78999999
Q ss_pred ccccccccchHhHhhe--eeecCCC
Q psy11730 367 SETIYSVANYNKLLTV--WCLFPTH 389 (496)
Q Consensus 367 ~~~l~~~~~~~~~~~~--~~l~p~~ 389 (496)
+.. ++..+++. ..|.|+|
T Consensus 146 d~~-----dp~~~~~~~~~~L~pgG 165 (262)
T 2cmg_A 146 LQE-----PDIHRIDGLKRMLKEDG 165 (262)
T ss_dssp SSC-----CCHHHHHHHHTTEEEEE
T ss_pred CCC-----ChHHHHHHHHHhcCCCc
Confidence 732 33334443 2466655
No 270
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=98.41 E-value=1.9e-07 Score=94.08 Aligned_cols=81 Identities=19% Similarity=0.167 Sum_probs=64.6
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC------CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCcee
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA------AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFD 362 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~------~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 362 (496)
.+.+|||+|||+|.++..+++... .+|+|+|+++.+++.|+.+....+ . ++.+.++|...... ...||
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g---~-~~~i~~~D~l~~~~--~~~fD 203 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQR---Q-KMTLLHQDGLANLL--VDPVD 203 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHT---C-CCEEEESCTTSCCC--CCCEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCC---C-CceEEECCCCCccc--cCCcc
Confidence 467999999999999999887653 689999999999999987654322 2 67889999766432 57899
Q ss_pred EEEEccccccccc
Q psy11730 363 IILTSETIYSVAN 375 (496)
Q Consensus 363 ~Ii~~~~l~~~~~ 375 (496)
+|++++++.+++.
T Consensus 204 ~Ii~NPPfg~~~~ 216 (344)
T 2f8l_A 204 VVISDLPVGYYPD 216 (344)
T ss_dssp EEEEECCCSEESC
T ss_pred EEEECCCCCCcCc
Confidence 9999999876643
No 271
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.41 E-value=3.6e-07 Score=92.48 Aligned_cols=85 Identities=22% Similarity=0.149 Sum_probs=69.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
.+.+|||||||+|.++..+++..+ .+++++|+ +.+++.+++ ..++++..+|+.+ +. . .||+|++.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~d~~~-~~--~-~~D~v~~~ 258 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTG---------NENLNFVGGDMFK-SI--P-SADAVLLK 258 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCC---------CSSEEEEECCTTT-CC--C-CCSEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhccc---------CCCcEEEeCccCC-CC--C-CceEEEEc
Confidence 457999999999999999998876 58999999 788877654 2459999999877 32 2 49999999
Q ss_pred cccccccchH--hHhhee--eecC
Q psy11730 368 ETIYSVANYN--KLLTVW--CLFP 387 (496)
Q Consensus 368 ~~l~~~~~~~--~~~~~~--~l~p 387 (496)
.++|++++.+ .++++. .|.|
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p 282 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISH 282 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGG
T ss_pred ccccCCCHHHHHHHHHHHHHhCCC
Confidence 9999998877 777763 5666
No 272
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.40 E-value=2.7e-07 Score=89.41 Aligned_cols=97 Identities=11% Similarity=0.025 Sum_probs=66.9
Q ss_pred CCeEEEecCcC--CHHHHHHHH-c-cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC-----CCc
Q psy11730 290 KLSVLDVGCGA--GLLGLYTLM-N-GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI-----HSK 360 (496)
Q Consensus 290 ~~~VLDlGcGt--G~~~~~la~-~-~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~ 360 (496)
..+|||||||+ +.++..+++ . ...+|+++|.|+.|++.++.+.... ...+++|+++|+.+..... ...
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~---~~~~~~~v~aD~~~~~~~l~~~~~~~~ 155 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLAST---PEGRTAYVEADMLDPASILDAPELRDT 155 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCC---SSSEEEEEECCTTCHHHHHTCHHHHTT
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccC---CCCcEEEEEecccChhhhhcccccccc
Confidence 36899999997 434444444 3 3379999999999999988654221 2357999999998863110 234
Q ss_pred ee-----EEEEccccccccch---HhHhhee--eecCCC
Q psy11730 361 FD-----IILTSETIYSVANY---NKLLTVW--CLFPTH 389 (496)
Q Consensus 361 fD-----~Ii~~~~l~~~~~~---~~~~~~~--~l~p~~ 389 (496)
|| .|+++.+|||+++. ..+++.+ .|.|++
T Consensus 156 ~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG 194 (277)
T 3giw_A 156 LDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGS 194 (277)
T ss_dssp CCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTC
T ss_pred cCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCc
Confidence 55 68899999999884 4566653 344444
No 273
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.37 E-value=3.6e-07 Score=93.20 Aligned_cols=81 Identities=21% Similarity=0.197 Sum_probs=64.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccccC------------CCCceEEEecccCCccc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMNTD------------NLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~~~------------~~~~v~~~~~d~~~~~~ 355 (496)
.+.+|||+|||+|..++.+++. +..+|+++|+++.+++.++++...+... ...+++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999987 5578999999999999998776443100 23459999999887654
Q ss_pred cCCCceeEEEEccc
Q psy11730 356 VIHSKFDIILTSET 369 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~ 369 (496)
...+.||+|+.+++
T Consensus 127 ~~~~~fD~I~lDP~ 140 (378)
T 2dul_A 127 ERHRYFHFIDLDPF 140 (378)
T ss_dssp HSTTCEEEEEECCS
T ss_pred hccCCCCEEEeCCC
Confidence 33468999998764
No 274
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.37 E-value=1.5e-07 Score=90.85 Aligned_cols=82 Identities=15% Similarity=0.081 Sum_probs=60.8
Q ss_pred CeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccccc--ccC----CCCceEEEecccCCccccCCCceeEE
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILM--NTD----NLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~--~~~----~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
.+|||+|||+|..++.++..|. +|+++|.++.+++.++...... +.. ...+++++++|..++.......||+|
T Consensus 90 ~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV 168 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVV 168 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEE
T ss_pred CEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEE
Confidence 7999999999999999998876 7999999998755544332110 100 11579999999887644333579999
Q ss_pred EEccccccc
Q psy11730 365 LTSETIYSV 373 (496)
Q Consensus 365 i~~~~l~~~ 373 (496)
++++++.+-
T Consensus 169 ~lDP~y~~~ 177 (258)
T 2oyr_A 169 YLDPMFPHK 177 (258)
T ss_dssp EECCCCCCC
T ss_pred EEcCCCCCc
Confidence 999998664
No 275
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.35 E-value=5e-07 Score=89.51 Aligned_cols=77 Identities=14% Similarity=0.078 Sum_probs=61.5
Q ss_pred CCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-CCCceeEEEEc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-IHSKFDIILTS 367 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~fD~Ii~~ 367 (496)
..+|||||||+|.++..+++.. ..+|++||+++.|++.|+++.... ...+++++.+|..+.... ..++||+|+++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~---~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D 166 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIP---RAPRVKIRVDDARMVAESFTPASRDVIIRD 166 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCC---CTTTEEEEESCHHHHHHTCCTTCEEEEEEC
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhcccc---CCCceEEEECcHHHHHhhccCCCCCEEEEC
Confidence 3499999999999999999843 468999999999999998765321 356899999998776432 25789999996
Q ss_pred cc
Q psy11730 368 ET 369 (496)
Q Consensus 368 ~~ 369 (496)
..
T Consensus 167 ~~ 168 (317)
T 3gjy_A 167 VF 168 (317)
T ss_dssp CS
T ss_pred CC
Confidence 43
No 276
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.34 E-value=8.9e-07 Score=89.90 Aligned_cols=87 Identities=18% Similarity=0.084 Sum_probs=68.6
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
...+|||||||+|.++..+++..+ .+++++|+ +.+++.++. ..+++|+.+|+.+ +.+ . . |+|++.
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~---------~~~v~~~~~D~~~-~~p-~-~-D~v~~~ 266 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQ---------FPGVTHVGGDMFK-EVP-S-G-DTILMK 266 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCC---------CTTEEEEECCTTT-CCC-C-C-SEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhh---------cCCeEEEeCCcCC-CCC-C-C-CEEEeh
Confidence 357999999999999999998766 68999999 889887664 2579999999887 432 2 3 999999
Q ss_pred cccccccch--HhHhhee--eecCCC
Q psy11730 368 ETIYSVANY--NKLLTVW--CLFPTH 389 (496)
Q Consensus 368 ~~l~~~~~~--~~~~~~~--~l~p~~ 389 (496)
.++|++++. ..++++. .|.|++
T Consensus 267 ~vlh~~~d~~~~~~L~~~~~~L~pgG 292 (364)
T 3p9c_A 267 WILHDWSDQHCATLLKNCYDALPAHG 292 (364)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTC
T ss_pred HHhccCCHHHHHHHHHHHHHHcCCCC
Confidence 999999654 4566653 556654
No 277
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=98.34 E-value=7.1e-07 Score=93.26 Aligned_cols=80 Identities=14% Similarity=-0.002 Sum_probs=63.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-C-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCC-CceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-A-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIH-SKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~fD~I 364 (496)
.++.+|||+|||+|..+..+++.. . .+|+|+|+|+.+++.++++.... +..++.++.+|+.+++.... +.||+|
T Consensus 258 ~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~---g~~~v~~~~~D~~~~~~~~~~~~fD~V 334 (450)
T 2yxl_A 258 KPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRM---GIKIVKPLVKDARKAPEIIGEEVADKV 334 (450)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHT---TCCSEEEECSCTTCCSSSSCSSCEEEE
T ss_pred CCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHc---CCCcEEEEEcChhhcchhhccCCCCEE
Confidence 357899999999999999998853 3 68999999999999988765432 24579999999988753223 689999
Q ss_pred EEcccc
Q psy11730 365 LTSETI 370 (496)
Q Consensus 365 i~~~~l 370 (496)
+++.+.
T Consensus 335 l~D~Pc 340 (450)
T 2yxl_A 335 LLDAPC 340 (450)
T ss_dssp EEECCC
T ss_pred EEcCCC
Confidence 986544
No 278
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.29 E-value=4.1e-07 Score=92.96 Aligned_cols=78 Identities=15% Similarity=0.063 Sum_probs=63.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCc-eEEEecccCCccc-cCCCceeEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEK-CKFYHGDWGSLSA-VIHSKFDII 364 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~-v~~~~~d~~~~~~-~~~~~fD~I 364 (496)
++.+|||++||+|.+++.++.. |+.+|+++|+++.+++.++++...++ ...+ ++++.+|+.++.. ...+.||+|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ng--l~~~~v~v~~~Da~~~l~~~~~~~fD~V 129 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNN--IPEDRYEIHGMEANFFLRKEWGFGFDYV 129 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTT--CCGGGEEEECSCHHHHHHSCCSSCEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhC--CCCceEEEEeCCHHHHHHHhhCCCCcEE
Confidence 4779999999999999998884 45899999999999999887764433 2234 9999999877654 335689999
Q ss_pred EEcc
Q psy11730 365 LTSE 368 (496)
Q Consensus 365 i~~~ 368 (496)
++++
T Consensus 130 ~lDP 133 (392)
T 3axs_A 130 DLDP 133 (392)
T ss_dssp EECC
T ss_pred EECC
Confidence 9988
No 279
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.27 E-value=7.5e-07 Score=89.42 Aligned_cols=81 Identities=17% Similarity=0.089 Sum_probs=64.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccC--CC---CceEEEecccCCcccc---CCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD--NL---EKCKFYHGDWGSLSAV---IHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~--~~---~~v~~~~~d~~~~~~~---~~~~ 360 (496)
++++||+||||+|.++..+++.++.+|++||+++.+++.|+++....+.. .. .+++++.+|..+.... ..+.
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 57899999999999999999888889999999999999999875433221 11 3799999998876542 2578
Q ss_pred eeEEEEccc
Q psy11730 361 FDIILTSET 369 (496)
Q Consensus 361 fD~Ii~~~~ 369 (496)
||+|++..+
T Consensus 268 fDvII~D~~ 276 (364)
T 2qfm_A 268 FDYVINDLT 276 (364)
T ss_dssp EEEEEEECC
T ss_pred ceEEEECCC
Confidence 999999764
No 280
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.26 E-value=1.7e-07 Score=84.57 Aligned_cols=80 Identities=19% Similarity=0.059 Sum_probs=65.5
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCceeEEEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSKFDIILT 366 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~Ii~ 366 (496)
+|.+|||||||. +++|+|+.|++.|+++. ..++++..+|+++++.. .+++||+|++
T Consensus 12 ~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~-------~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 12 AGQFVAVVWDKS---------------SPVEALKGLVDKLQALT-------GNEGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp TTSEEEEEECTT---------------SCHHHHHHHHHHHHHHT-------TTTSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCEEEEecCCc---------------eeeeCCHHHHHHHHHhc-------ccCcEEEEechhcCccccCCCCCEeEEEE
Confidence 588999999996 23999999999998764 12489999999988751 3689999999
Q ss_pred ccccccc-cchHhHhhe--eeecCCCC
Q psy11730 367 SETIYSV-ANYNKLLTV--WCLFPTHT 390 (496)
Q Consensus 367 ~~~l~~~-~~~~~~~~~--~~l~p~~~ 390 (496)
..+++|+ ++...++++ ..|.|+|.
T Consensus 70 ~~~l~~~~~~~~~~l~~~~r~LkpgG~ 96 (176)
T 2ld4_A 70 GLVPGSTTLHSAEILAEIARILRPGGC 96 (176)
T ss_dssp CCSTTCCCCCCHHHHHHHHHHEEEEEE
T ss_pred CChhhhcccCHHHHHHHHHHHCCCCEE
Confidence 9999999 899888887 36777763
No 281
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.25 E-value=2.5e-06 Score=84.57 Aligned_cols=80 Identities=13% Similarity=0.073 Sum_probs=63.8
Q ss_pred CCCCeEEEecCcCCHHHHHHHHc--cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC--CCceeE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMN--GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--HSKFDI 363 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~--~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~ 363 (496)
.++.+|||+|||+|..++.+++. +..+|+|+|+++.+++.++++....+ ..+++++.+|+.++.... ...||+
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g---~~~v~~~~~D~~~~~~~~~~~~~fD~ 177 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG---VSCCELAEEDFLAVSPSDPRYHEVHY 177 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTT---CCSEEEEECCGGGSCTTCGGGTTEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcC---CCeEEEEeCChHhcCccccccCCCCE
Confidence 35789999999999999999875 34799999999999999887754432 467999999988765421 157999
Q ss_pred EEEcccc
Q psy11730 364 ILTSETI 370 (496)
Q Consensus 364 Ii~~~~l 370 (496)
|+++.+.
T Consensus 178 Vl~D~Pc 184 (309)
T 2b9e_A 178 ILLDPSC 184 (309)
T ss_dssp EEECCCC
T ss_pred EEEcCCc
Confidence 9987654
No 282
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.23 E-value=3.6e-06 Score=84.99 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=76.8
Q ss_pred HHHHHhCCCCC-CCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 279 LNFIKDNVAVD-KLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 279 ~~~l~~~~~~~-~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
+..+....++. ..+|||||||+|.++..+++..+ .+++..|. +.+++.+++.... ....+|+|+.+|+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~---~~~~rv~~~~gD~~~~~-- 241 (353)
T 4a6d_A 168 GRSVLTAFDLSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSF---QEEEQIDFQEGDFFKDP-- 241 (353)
T ss_dssp HHHHHHSSCGGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC-----CCSEEEEESCTTTSC--
T ss_pred HHHHHHhcCcccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhh---cccCceeeecCccccCC--
Confidence 34444444444 57999999999999999999887 57888887 7889888765422 23678999999987643
Q ss_pred CCCceeEEEEccccccccchH--hHhhee--eecCCC
Q psy11730 357 IHSKFDIILTSETIYSVANYN--KLLTVW--CLFPTH 389 (496)
Q Consensus 357 ~~~~fD~Ii~~~~l~~~~~~~--~~~~~~--~l~p~~ 389 (496)
...+|+|++..++|++++.+ .++++. .|.|++
T Consensus 242 -~~~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg 277 (353)
T 4a6d_A 242 -LPEADLYILARVLHDWADGKCSHLLERIYHTCKPGG 277 (353)
T ss_dssp -CCCCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTC
T ss_pred -CCCceEEEeeeecccCCHHHHHHHHHHHHhhCCCCC
Confidence 34689999999999998764 456552 455654
No 283
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=98.22 E-value=1.3e-06 Score=90.63 Aligned_cols=80 Identities=19% Similarity=0.106 Sum_probs=63.6
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc-cCCCceeEEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA-VIHSKFDIIL 365 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~~~fD~Ii 365 (496)
.++.+|||+|||+|..+..+++.+. .+|+|+|+|+.+++.++++....+ .++.++.+|+.++.. ...+.||+|+
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g----~~~~~~~~D~~~~~~~~~~~~fD~Vl 320 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLG----MKATVKQGDGRYPSQWCGEQQFDRIL 320 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTT----CCCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcC----CCeEEEeCchhhchhhcccCCCCEEE
Confidence 3578999999999999999998765 799999999999999887654332 247889999887753 1246899999
Q ss_pred Eccccc
Q psy11730 366 TSETIY 371 (496)
Q Consensus 366 ~~~~l~ 371 (496)
++.+..
T Consensus 321 ~D~Pcs 326 (429)
T 1sqg_A 321 LDAPCS 326 (429)
T ss_dssp EECCCC
T ss_pred EeCCCC
Confidence 866543
No 284
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=98.18 E-value=1.7e-06 Score=90.25 Aligned_cols=94 Identities=16% Similarity=0.129 Sum_probs=68.5
Q ss_pred HHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHc--------------cCCeEEEEeCCHHHHHHhcCcccccccCCCCc
Q psy11730 278 LLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN--------------GAAHVSFQDYNQEVIESLTLPNILMNTDNLEK 342 (496)
Q Consensus 278 l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~--------------~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~ 342 (496)
+++.+.+... ..+.+|||.|||+|.+.+.+++. ....++|+|+++.+++.|+.+....+. ...+
T Consensus 159 v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~-~~~~ 237 (445)
T 2okc_A 159 LIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGI-GTDR 237 (445)
T ss_dssp HHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTC-CSSC
T ss_pred HHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCC-CcCC
Confidence 4444444433 34679999999999999998764 236799999999999998865433221 1126
Q ss_pred eEEEecccCCccccCCCceeEEEEcccccccc
Q psy11730 343 CKFYHGDWGSLSAVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 343 v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~ 374 (496)
+.+.++|....+. ...||+|++++|+....
T Consensus 238 ~~i~~gD~l~~~~--~~~fD~Iv~NPPf~~~~ 267 (445)
T 2okc_A 238 SPIVCEDSLEKEP--STLVDVILANPPFGTRP 267 (445)
T ss_dssp CSEEECCTTTSCC--SSCEEEEEECCCSSCCC
T ss_pred CCEeeCCCCCCcc--cCCcCEEEECCCCCCcc
Confidence 7888999776554 35899999999998754
No 285
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.08 E-value=8.6e-06 Score=89.54 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=72.1
Q ss_pred hHHHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHccC-----------------------------------------
Q psy11730 275 TFDLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNGA----------------------------------------- 312 (496)
Q Consensus 275 ~~~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~~----------------------------------------- 312 (496)
...|+..+..... ..+..|||.+||+|.+.+.++..+.
T Consensus 175 ~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~ 254 (703)
T 3v97_A 175 KETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAE 254 (703)
T ss_dssp CHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhcccc
Confidence 3456666555544 3577999999999999999876531
Q ss_pred --CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC-CCceeEEEEcccccc
Q psy11730 313 --AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI-HSKFDIILTSETIYS 372 (496)
Q Consensus 313 --~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~~fD~Ii~~~~l~~ 372 (496)
..|+|+|+++.|++.|+.+....+ ....++|.++|+.++.... .+.||+|++++|+..
T Consensus 255 ~~~~i~G~Did~~av~~A~~N~~~ag--v~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~ 315 (703)
T 3v97_A 255 YSSHFYGSDSDARVIQRARTNARLAG--IGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGE 315 (703)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHTT--CGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC
T ss_pred CCccEEEEECCHHHHHHHHHHHHHcC--CCCceEEEECChhhCccccccCCCCEEEeCCCccc
Confidence 479999999999999987754432 3346999999998875432 238999999999854
No 286
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.08 E-value=2.5e-06 Score=91.88 Aligned_cols=81 Identities=15% Similarity=0.047 Sum_probs=59.1
Q ss_pred CCCCeEEEecCcCCHHHHHHHH---ccCC--eEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCcee
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM---NGAA--HVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFD 362 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~---~~~~--~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 362 (496)
..+..|||||||+|.+..+.++ .+.. +|+|||.|+.+ ..+++.. ..| +-...|+++++|++++.. .+++|
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp~A-~~a~~~v-~~N-~~~dkVtVI~gd~eev~L--PEKVD 430 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNPNA-VVTLENW-QFE-EWGSQVTVVSSDMREWVA--PEKAD 430 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCHHH-HHHHHHH-HHH-TTGGGEEEEESCTTTCCC--SSCEE
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCHHH-HHHHHHH-Hhc-cCCCeEEEEeCcceeccC--CcccC
Confidence 3456899999999999555444 4433 68999999854 4444432 222 346789999999999876 58999
Q ss_pred EEEEccccccc
Q psy11730 363 IILTSETIYSV 373 (496)
Q Consensus 363 ~Ii~~~~l~~~ 373 (496)
+|||..+-++.
T Consensus 431 IIVSEwMG~fL 441 (637)
T 4gqb_A 431 IIVSELLGSFA 441 (637)
T ss_dssp EEECCCCBTTB
T ss_pred EEEEEcCcccc
Confidence 99997776655
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.00 E-value=8.5e-06 Score=70.58 Aligned_cols=87 Identities=15% Similarity=0.119 Sum_probs=61.7
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCC-HHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAG-LLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG-~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
.|+++|.+... .+.+|||||||.| ..+..|++.....|+++|+|+..++ |++.|+-+...
T Consensus 24 ~LaeYI~~~~~-~~~rVlEVG~G~g~~vA~~La~~~g~~V~atDInp~Av~------------------~v~dDiF~P~~ 84 (153)
T 2k4m_A 24 DLAVYIIRCSG-PGTRVVEVGAGRFLYVSDYIRKHSKVDLVLTDIKPSHGG------------------IVRDDITSPRM 84 (153)
T ss_dssp HHHHHHHHHSC-SSSEEEEETCTTCCHHHHHHHHHSCCEEEEECSSCSSTT------------------EECCCSSSCCH
T ss_pred HHHHHHHhcCC-CCCcEEEEccCCChHHHHHHHHhCCCeEEEEECCccccc------------------eEEccCCCCcc
Confidence 46666665542 4679999999999 6999999744457999999986654 47777765433
Q ss_pred cCCCceeEEEE-ccccccccchHhHhhe
Q psy11730 356 VIHSKFDIILT-SETIYSVANYNKLLTV 382 (496)
Q Consensus 356 ~~~~~fD~Ii~-~~~l~~~~~~~~~~~~ 382 (496)
..-..||+|.+ +++.+..+..-.+-+.
T Consensus 85 ~~Y~~~DLIYsirPP~El~~~i~~lA~~ 112 (153)
T 2k4m_A 85 EIYRGAALIYSIRPPAEIHSSLMRVADA 112 (153)
T ss_dssp HHHTTEEEEEEESCCTTTHHHHHHHHHH
T ss_pred cccCCcCEEEEcCCCHHHHHHHHHHHHH
Confidence 21258999955 7777666666665554
No 288
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=97.87 E-value=2.4e-05 Score=83.22 Aligned_cols=97 Identities=14% Similarity=0.031 Sum_probs=69.9
Q ss_pred hHHHHHHHHhCC-CCCCCeEEEecCcCCHHHHHHHHc----cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecc
Q psy11730 275 TFDLLNFIKDNV-AVDKLSVLDVGCGAGLLGLYTLMN----GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349 (496)
Q Consensus 275 ~~~l~~~l~~~~-~~~~~~VLDlGcGtG~~~~~la~~----~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d 349 (496)
+..|++.+.... +..+.+|||.+||||.+.+.+++. +...++|+|+++.++..|+.+....+ ....++.+.++|
T Consensus 206 v~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g-i~~~~~~I~~gD 284 (542)
T 3lkd_A 206 AKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG-VPIENQFLHNAD 284 (542)
T ss_dssp HHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT-CCGGGEEEEESC
T ss_pred HHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC-CCcCccceEecc
Confidence 344555555332 235779999999999999988765 24689999999999999886543322 112567889998
Q ss_pred cCCc--cccCCCceeEEEEcccccc
Q psy11730 350 WGSL--SAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 350 ~~~~--~~~~~~~fD~Ii~~~~l~~ 372 (496)
.... +......||+|++++|+..
T Consensus 285 tL~~d~p~~~~~~fD~IvaNPPf~~ 309 (542)
T 3lkd_A 285 TLDEDWPTQEPTNFDGVLMNPPYSA 309 (542)
T ss_dssp TTTSCSCCSSCCCBSEEEECCCTTC
T ss_pred eecccccccccccccEEEecCCcCC
Confidence 7655 3333578999999999863
No 289
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=97.85 E-value=1.2e-05 Score=85.64 Aligned_cols=84 Identities=13% Similarity=-0.038 Sum_probs=62.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHHcc-------------------CCeEEEEeCCHHHHHHhcCcccccccCCCCc-----e
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNG-------------------AAHVSFQDYNQEVIESLTLPNILMNTDNLEK-----C 343 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~-------------------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~-----v 343 (496)
..+.+|||.|||||.+.+.+++.. ...++|+|+++.++..|+.+....+ ..+ +
T Consensus 168 ~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~g---i~~~~~~~~ 244 (541)
T 2ar0_A 168 QPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHD---IEGNLDHGG 244 (541)
T ss_dssp CTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTT---CCCBGGGTB
T ss_pred CCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhC---CCccccccC
Confidence 347799999999999999877531 2479999999999999886543322 222 7
Q ss_pred EEEecccCCccccCCCceeEEEEcccccccc
Q psy11730 344 KFYHGDWGSLSAVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 344 ~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~~~ 374 (496)
.+.++|....+......||+|++++|+....
T Consensus 245 ~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~ 275 (541)
T 2ar0_A 245 AIRLGNTLGSDGENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp SEEESCTTSHHHHTSCCEEEEEECCCCTTCS
T ss_pred CeEeCCCcccccccccCCeEEEECCCccccc
Confidence 7888887654432246899999999987653
No 290
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.81 E-value=2e-05 Score=76.08 Aligned_cols=87 Identities=20% Similarity=0.094 Sum_probs=66.3
Q ss_pred HHHHHHhCCCC-CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc
Q psy11730 278 LLNFIKDNVAV-DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV 356 (496)
Q Consensus 278 l~~~l~~~~~~-~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~ 356 (496)
|++.+.+...+ ++..+||.+||.|.++..+++. ..+|+|+|.++.+++.+++ ... .+++++++++.++...
T Consensus 10 Ll~e~le~L~~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~------~rv~lv~~~f~~l~~~ 81 (285)
T 1wg8_A 10 LYQEALDLLAVRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL------PGLTVVQGNFRHLKRH 81 (285)
T ss_dssp THHHHHHHHTCCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC------TTEEEEESCGGGHHHH
T ss_pred HHHHHHHhhCCCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc------CCEEEEECCcchHHHH
Confidence 33444443333 5789999999999999999998 5689999999999999886 311 5899999999987542
Q ss_pred C----CCceeEEEEcccccc
Q psy11730 357 I----HSKFDIILTSETIYS 372 (496)
Q Consensus 357 ~----~~~fD~Ii~~~~l~~ 372 (496)
. .+++|.|+++.-+..
T Consensus 82 L~~~g~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 82 LAALGVERVDGILADLGVSS 101 (285)
T ss_dssp HHHTTCSCEEEEEEECSCCH
T ss_pred HHHcCCCCcCEEEeCCcccc
Confidence 1 257999998654443
No 291
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=97.80 E-value=6.7e-05 Score=73.84 Aligned_cols=45 Identities=22% Similarity=0.266 Sum_probs=40.1
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChh
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFP 472 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~ 472 (496)
+...+.++|+|||.++++.|-.|.|.|.+-|+.+..|+...+.++
T Consensus 275 gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q 319 (332)
T 2xxz_A 275 NIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQ 319 (332)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCTTGG
T ss_pred CCCeEEEEECCCCEEEECCCceEEEEecceeeEEEEEeCCCcHHH
Confidence 455678899999999999999999999999999999999887653
No 292
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=97.79 E-value=3.8e-05 Score=83.91 Aligned_cols=84 Identities=14% Similarity=0.081 Sum_probs=58.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHccC----CeEEEEeCCHHHHHHh--cCccccccc-CCCCceEEEecccCCccccCCCce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGA----AHVSFQDYNQEVIESL--TLPNILMNT-DNLEKCKFYHGDWGSLSAVIHSKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~----~~v~giD~s~~~i~~a--~~~~~~~~~-~~~~~v~~~~~d~~~~~~~~~~~f 361 (496)
.+.+|||.|||+|.+.+.++.... .+++|+|+++.+++.| +.+...+.. .......+...|+..........|
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 577999999999999999887653 5799999999999988 322211110 122334555566655332225789
Q ss_pred eEEEEcccccc
Q psy11730 362 DIILTSETIYS 372 (496)
Q Consensus 362 D~Ii~~~~l~~ 372 (496)
|+|++++|+..
T Consensus 401 DVVIgNPPYg~ 411 (878)
T 3s1s_A 401 SVVVMNPPYVS 411 (878)
T ss_dssp EEEEECCBCCS
T ss_pred CEEEECCCccc
Confidence 99999999943
No 293
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=97.74 E-value=1.6e-05 Score=84.69 Aligned_cols=94 Identities=13% Similarity=-0.025 Sum_probs=63.9
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHcc----------------CCeEEEEeCCHHHHHHhcCcccccccCCC
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNG----------------AAHVSFQDYNQEVIESLTLPNILMNTDNL 340 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~----------------~~~v~giD~s~~~i~~a~~~~~~~~~~~~ 340 (496)
.++++|.+.......+|||.+||||.+.+.+++.- ...++|+|+++.++..|+.+....+ ..
T Consensus 232 ~Vv~lmv~ll~p~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g--i~ 309 (544)
T 3khk_A 232 SIVTLIVEMLEPYKGRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRG--ID 309 (544)
T ss_dssp HHHHHHHHHHCCCSEEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTT--CC
T ss_pred HHHHHHHHHHhcCCCeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhC--CC
Confidence 34444444333344499999999999988865421 3479999999999999887654332 12
Q ss_pred CceEEEecccCCccccCCCceeEEEEcccccc
Q psy11730 341 EKCKFYHGDWGSLSAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 341 ~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~~ 372 (496)
.++.+.++|....+......||+|++++|+..
T Consensus 310 ~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 310 FNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp CBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred cccceeccchhcCcccccccccEEEECCCcCC
Confidence 23444677755444333578999999999875
No 294
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.73 E-value=2e-05 Score=84.82 Aligned_cols=81 Identities=19% Similarity=0.187 Sum_probs=59.8
Q ss_pred CCeEEEecCcCCHHHHHHH--H--cc----------CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 290 KLSVLDVGCGAGLLGLYTL--M--NG----------AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la--~--~~----------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
++.|||||||+|.++.+++ . .+ ..+|+|||.|+.++..++..+. | +-...|+++++|++++..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~--N-g~~d~VtVI~gd~eev~l 486 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV--R-TWKRRVTIIESDMRSLPG 486 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH--H-TTTTCSEEEESCGGGHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh--c-CCCCeEEEEeCchhhccc
Confidence 4589999999999975432 2 22 2499999999987766554442 2 234679999999999865
Q ss_pred c----CCCceeEEEEccccccc
Q psy11730 356 V----IHSKFDIILTSETIYSV 373 (496)
Q Consensus 356 ~----~~~~fD~Ii~~~~l~~~ 373 (496)
+ ..+++|+|||..+-++.
T Consensus 487 p~~~~~~ekVDIIVSElmGsfl 508 (745)
T 3ua3_A 487 IAKDRGFEQPDIIVSELLGSFG 508 (745)
T ss_dssp HHHHTTCCCCSEEEECCCBTTB
T ss_pred ccccCCCCcccEEEEecccccc
Confidence 2 14789999998887654
No 295
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=97.67 E-value=6.2e-05 Score=73.65 Aligned_cols=73 Identities=19% Similarity=0.311 Sum_probs=51.2
Q ss_pred HHHHHHH-hCCCC-CCCeEEEecCcC------CHHHHHHHH-cc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEE-
Q psy11730 277 DLLNFIK-DNVAV-DKLSVLDVGCGA------GLLGLYTLM-NG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKF- 345 (496)
Q Consensus 277 ~l~~~l~-~~~~~-~~~~VLDlGcGt------G~~~~~la~-~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~- 345 (496)
.+.+++. ....+ ++.+|||||||+ |. ..+++ .+ ..+|+|+|+|+. + .+++|
T Consensus 49 ~l~~~l~~~~l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-v---------------~~v~~~ 110 (290)
T 2xyq_A 49 QLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-V---------------SDADST 110 (290)
T ss_dssp HHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-B---------------CSSSEE
T ss_pred HHHHHHHHhhcCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-C---------------CCCEEE
Confidence 3555653 23333 477999999955 66 33344 34 278999999987 1 25788
Q ss_pred EecccCCccccCCCceeEEEEccc
Q psy11730 346 YHGDWGSLSAVIHSKFDIILTSET 369 (496)
Q Consensus 346 ~~~d~~~~~~~~~~~fD~Ii~~~~ 369 (496)
+++|+.+++. .++||+|+++.+
T Consensus 111 i~gD~~~~~~--~~~fD~Vvsn~~ 132 (290)
T 2xyq_A 111 LIGDCATVHT--ANKWDLIISDMY 132 (290)
T ss_dssp EESCGGGCCC--SSCEEEEEECCC
T ss_pred EECccccCCc--cCcccEEEEcCC
Confidence 9999988654 478999999754
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.59 E-value=8.5e-05 Score=71.28 Aligned_cols=94 Identities=16% Similarity=0.025 Sum_probs=63.6
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
..+++.|.+.......-.+.+|||||||.|.++..+++. +...|+|+|++.++....... .....++..+..++
T Consensus 57 SRaA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-----~~~g~~ii~~~~~~ 131 (277)
T 3evf_A 57 SRGTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-----QSLGWNIITFKDKT 131 (277)
T ss_dssp STHHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-----CBTTGGGEEEECSC
T ss_pred ccHHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-----CcCCCCeEEEeccc
Confidence 667888999888844445679999999999999998775 557899999986541111110 00122555566665
Q ss_pred CCccccCCCceeEEEEccccc
Q psy11730 351 GSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+..... .+.||+|+|..+..
T Consensus 132 dv~~l~-~~~~DlVlsD~apn 151 (277)
T 3evf_A 132 DIHRLE-PVKCDTLLCDIGES 151 (277)
T ss_dssp CTTTSC-CCCCSEEEECCCCC
T ss_pred eehhcC-CCCccEEEecCccC
Confidence 433332 57899999977555
No 297
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.57 E-value=8.7e-05 Score=71.32 Aligned_cols=94 Identities=13% Similarity=0.005 Sum_probs=62.9
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHH-ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLM-NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~-~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
..+++.|.+...+....++.+|||||||.|.++..+++ .+...|+|+|++..+...+.... ....++.....+.
T Consensus 73 SRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~~-----~~g~~ii~~~~~~ 147 (282)
T 3gcz_A 73 SRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMRT-----TLGWNLIRFKDKT 147 (282)
T ss_dssp STHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCC-----BTTGGGEEEECSC
T ss_pred cHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCccccccccc-----cCCCceEEeeCCc
Confidence 56788899999887444577999999999999999875 45578999999876533222100 0123444444333
Q ss_pred CCccccCCCceeEEEEccccc
Q psy11730 351 GSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+-... ....+|+|+|..+..
T Consensus 148 dv~~l-~~~~~DvVLSDmApn 167 (282)
T 3gcz_A 148 DVFNM-EVIPGDTLLCDIGES 167 (282)
T ss_dssp CGGGS-CCCCCSEEEECCCCC
T ss_pred chhhc-CCCCcCEEEecCccC
Confidence 32222 257899999977665
No 298
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=97.56 E-value=0.00024 Score=74.13 Aligned_cols=45 Identities=20% Similarity=0.245 Sum_probs=39.6
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChh
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFP 472 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~ 472 (496)
+...+.++|+|||.++++.|-.|.|.|.+-++++..||...+.++
T Consensus 334 gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~~~q 378 (531)
T 3avr_A 334 NVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLTACQ 378 (531)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSSHHH
T ss_pred CCCeEEEEECCCCEEEECCCceEEEEecceeeeeEEEeccCchHH
Confidence 445577899999999999999999999999999999999887554
No 299
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.32 E-value=0.00018 Score=70.59 Aligned_cols=58 Identities=12% Similarity=-0.050 Sum_probs=47.2
Q ss_pred hHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCccc
Q psy11730 275 TFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNI 333 (496)
Q Consensus 275 ~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~ 333 (496)
...|++.+......++..|||++||+|.+++.+++.| .+++|+|+++.+++.|+++..
T Consensus 221 p~~l~~~~i~~~~~~~~~vlD~f~GsGt~~~~a~~~g-~~~~g~e~~~~~~~~a~~r~~ 278 (297)
T 2zig_A 221 PLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWG-RRALGVELVPRYAQLAKERFA 278 (297)
T ss_dssp CHHHHHHHHHHHCCTTCEEEETTCTTTHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHHH
Confidence 3456666655545578899999999999999977776 589999999999999987753
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.32 E-value=0.00045 Score=69.28 Aligned_cols=74 Identities=12% Similarity=0.112 Sum_probs=56.9
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
-+|.+||||||+.|.++..++++|. .|+|||+.+ |-..+. ..++|+++.+|....... ...||+|+|.
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~-l~~~l~---------~~~~V~~~~~d~~~~~~~-~~~~D~vvsD 277 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGP-MAQSLM---------DTGQVTWLREDGFKFRPT-RSNISWMVCD 277 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSC-CCHHHH---------TTTCEEEECSCTTTCCCC-SSCEEEEEEC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhh-cChhhc---------cCCCeEEEeCccccccCC-CCCcCEEEEc
Confidence 3588999999999999999998875 899999764 211111 256899999998876653 4689999998
Q ss_pred cccccc
Q psy11730 368 ETIYSV 373 (496)
Q Consensus 368 ~~l~~~ 373 (496)
.+.+..
T Consensus 278 m~~~p~ 283 (375)
T 4auk_A 278 MVEKPA 283 (375)
T ss_dssp CSSCHH
T ss_pred CCCChH
Confidence 776543
No 301
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=97.31 E-value=0.00062 Score=62.77 Aligned_cols=79 Identities=11% Similarity=0.058 Sum_probs=58.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc---------------
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL--------------- 353 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~--------------- 353 (496)
+.++|||+|| |..++.+|+...++|+.+|.+++..+.++++....+.....+++++.+|+.+.
T Consensus 30 ~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l 107 (202)
T 3cvo_A 30 EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSY 107 (202)
T ss_dssp HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGT
T ss_pred CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhH
Confidence 4679999998 57888888753579999999999999988765433211156899999996543
Q ss_pred cc-------c-CCCceeEEEEccc
Q psy11730 354 SA-------V-IHSKFDIILTSET 369 (496)
Q Consensus 354 ~~-------~-~~~~fD~Ii~~~~ 369 (496)
+. . ..++||+|+....
T Consensus 108 ~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 108 PDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp THHHHGGGGCTTCCCCSEEEECSS
T ss_pred HHHhhhhhccccCCCCCEEEEeCC
Confidence 11 1 1368999999775
No 302
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.15 E-value=0.00065 Score=63.36 Aligned_cols=89 Identities=24% Similarity=0.244 Sum_probs=62.7
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHH-ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEec-c
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLM-NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHG-D 349 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~-~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~-d 349 (496)
..+++.|.+.........+..||||||+.|.++..++. .++.+|+|+|+...-.+.-+. .....-+.++|..+ |
T Consensus 61 SRa~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~----~~s~gwn~v~fk~gvD 136 (267)
T 3p8z_A 61 SRGSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVP----MSTYGWNIVKLMSGKD 136 (267)
T ss_dssp STHHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCC----CCCTTTTSEEEECSCC
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcch----hhhcCcCceEEEeccc
Confidence 55677888888777444577999999999999998775 455889999987543321000 01123467889988 8
Q ss_pred cCCccccCCCceeEEEEc
Q psy11730 350 WGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 350 ~~~~~~~~~~~fD~Ii~~ 367 (496)
+..++ ...+|+|+|.
T Consensus 137 v~~~~---~~~~DtllcD 151 (267)
T 3p8z_A 137 VFYLP---PEKCDTLLCD 151 (267)
T ss_dssp GGGCC---CCCCSEEEEC
T ss_pred eeecC---CccccEEEEe
Confidence 76555 3669999994
No 303
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.13 E-value=0.0014 Score=63.90 Aligned_cols=81 Identities=15% Similarity=0.104 Sum_probs=67.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccc--cCCCCceEEEecccCCccccCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMN--TDNLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~--~~~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
...++||=||-|.|..+..+++... .+|+.+|+++++++.+++.....+ ....++++++.+|.........++||+|
T Consensus 82 p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvI 161 (294)
T 3o4f_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp SCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEE
T ss_pred CCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEE
Confidence 4678999999999999999888654 899999999999999987754433 2346899999999888776556899999
Q ss_pred EEcc
Q psy11730 365 LTSE 368 (496)
Q Consensus 365 i~~~ 368 (496)
+...
T Consensus 162 i~D~ 165 (294)
T 3o4f_A 162 ISDC 165 (294)
T ss_dssp EESC
T ss_pred EEeC
Confidence 9854
No 304
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=96.96 E-value=0.0013 Score=63.63 Aligned_cols=94 Identities=14% Similarity=-0.000 Sum_probs=60.6
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEeccc
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~ 350 (496)
..+++.|.+...+.+..++.+||||||+.|.++..+++. +...|+|+|+...+....... .....++.....+.
T Consensus 64 SRaa~KL~ei~ek~l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~-----~~~~~~iv~~~~~~ 138 (300)
T 3eld_A 64 SRGAAKIRWLHERGYLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHM-----QTLGWNIVKFKDKS 138 (300)
T ss_dssp STTHHHHHHHHHHTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-----CBTTGGGEEEECSC
T ss_pred chHHHHHHHHHHhCCCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccc-----cccCCceEEeecCc
Confidence 667888999998844456889999999999999999875 557899999976532111100 00112333333322
Q ss_pred CCccccCCCceeEEEEccccc
Q psy11730 351 GSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 351 ~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+-... ..+.+|+|+|..+-.
T Consensus 139 di~~l-~~~~~DlVlsD~APn 158 (300)
T 3eld_A 139 NVFTM-PTEPSDTLLCDIGES 158 (300)
T ss_dssp CTTTS-CCCCCSEEEECCCCC
T ss_pred eeeec-CCCCcCEEeecCcCC
Confidence 21111 157899999976655
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=96.87 E-value=0.0014 Score=63.13 Aligned_cols=96 Identities=18% Similarity=0.093 Sum_probs=63.0
Q ss_pred ecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHH-ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEec-c
Q psy11730 272 WECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLM-NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHG-D 349 (496)
Q Consensus 272 ~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~-~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~-d 349 (496)
..+++.|.+.........+..||||||++|.++.+++. .++..|+|+|+...-.+.-... ....-..|.|..+ |
T Consensus 77 SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~----~ql~w~lV~~~~~~D 152 (321)
T 3lkz_A 77 SRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLV----QSYGWNIVTMKSGVD 152 (321)
T ss_dssp STHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCC----CBTTGGGEEEECSCC
T ss_pred chHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchh----hhcCCcceEEEeccC
Confidence 56677888888775444577999999999999997765 4558899999876422100000 0011123666766 7
Q ss_pred cCCccccCCCceeEEEEccccccccc
Q psy11730 350 WGSLSAVIHSKFDIILTSETIYSVAN 375 (496)
Q Consensus 350 ~~~~~~~~~~~fD~Ii~~~~l~~~~~ 375 (496)
+..+.. ..+|+|+|.-. ..-++
T Consensus 153 v~~l~~---~~~D~ivcDig-eSs~~ 174 (321)
T 3lkz_A 153 VFYRPS---ECCDTLLCDIG-ESSSS 174 (321)
T ss_dssp TTSSCC---CCCSEEEECCC-CCCSC
T ss_pred HhhCCC---CCCCEEEEECc-cCCCC
Confidence 666553 66999999655 54444
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.85 E-value=0.00058 Score=65.96 Aligned_cols=97 Identities=14% Similarity=0.064 Sum_probs=73.0
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeEE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDII 364 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~I 364 (496)
+.+..+||+.+|||.+++.+.. +..+++.+|.++..+...+++.. ...++++++.|...... .+...||+|
T Consensus 90 ~n~~~~LDlfaGSGaLgiEaLS-~~d~~vfvE~~~~a~~~L~~Nl~-----~~~~~~V~~~D~~~~L~~l~~~~~~fdLV 163 (283)
T 2oo3_A 90 INLNSTLSYYPGSPYFAINQLR-SQDRLYLCELHPTEYNFLLKLPH-----FNKKVYVNHTDGVSKLNALLPPPEKRGLI 163 (283)
T ss_dssp HSSSSSCCEEECHHHHHHHHSC-TTSEEEEECCSHHHHHHHTTSCC-----TTSCEEEECSCHHHHHHHHCSCTTSCEEE
T ss_pred hcCCCceeEeCCcHHHHHHHcC-CCCeEEEEeCCHHHHHHHHHHhC-----cCCcEEEEeCcHHHHHHHhcCCCCCccEE
Confidence 3567899999999999999666 66999999999999998887653 24689999999654322 223579999
Q ss_pred EEccccccccchHhHhhe----eeecCCCC
Q psy11730 365 LTSETIYSVANYNKLLTV----WCLFPTHT 390 (496)
Q Consensus 365 i~~~~l~~~~~~~~~~~~----~~l~p~~~ 390 (496)
+..+++..-.+.+.+++. ..++|.+.
T Consensus 164 fiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi 193 (283)
T 2oo3_A 164 FIDPSYERKEEYKEIPYAIKNAYSKFSTGL 193 (283)
T ss_dssp EECCCCCSTTHHHHHHHHHHHHHHHCTTSE
T ss_pred EECCCCCCCcHHHHHHHHHHHhCccCCCeE
Confidence 999999865556555532 35666653
No 307
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.79 E-value=0.0022 Score=63.27 Aligned_cols=96 Identities=18% Similarity=0.171 Sum_probs=69.3
Q ss_pred HHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHc-cC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc
Q psy11730 278 LLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMN-GA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS 354 (496)
Q Consensus 278 l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~-~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~ 354 (496)
|++.+.+... .+|..++|..||.|..+..+++. ++ .+|+|+|.++++++.++ +. ...+++++++++.++.
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL------~~~Rv~lv~~nF~~l~ 117 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI------DDPRFSIIHGPFSALG 117 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC------CCTTEEEEESCGGGHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh------cCCcEEEEeCCHHHHH
Confidence 3344444433 45889999999999999999876 44 79999999999999984 32 2468999999988875
Q ss_pred ccC-----CCceeEEEEccccccc--cchHhHh
Q psy11730 355 AVI-----HSKFDIILTSETIYSV--ANYNKLL 380 (496)
Q Consensus 355 ~~~-----~~~fD~Ii~~~~l~~~--~~~~~~~ 380 (496)
... .+++|.|+.+.-+..+ .+.+.=|
T Consensus 118 ~~L~~~g~~~~vDgILfDLGVSS~QlD~~eRGF 150 (347)
T 3tka_A 118 EYVAERDLIGKIDGILLDLGVSSPQLDDAERGF 150 (347)
T ss_dssp HHHHHTTCTTCEEEEEEECSCCHHHHHCGGGCC
T ss_pred HHHHhcCCCCcccEEEECCccCHHHhcCCCCCC
Confidence 422 1369999986655433 4544433
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.61 E-value=0.0019 Score=65.40 Aligned_cols=76 Identities=20% Similarity=0.160 Sum_probs=61.4
Q ss_pred CeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-------CCCceeE
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-------IHSKFDI 363 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------~~~~fD~ 363 (496)
-+|+||.||.|.+++-+.+.|...|.++|+++.+++..+.+. ++..++.+|+.++... ....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~--------~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINF--------PRSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHC--------TTSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhC--------CCCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 379999999999999999999988999999999998766542 3567788888876431 1367999
Q ss_pred EEEcccccccc
Q psy11730 364 ILTSETIYSVA 374 (496)
Q Consensus 364 Ii~~~~l~~~~ 374 (496)
|+..++...++
T Consensus 75 i~ggpPCQ~fS 85 (376)
T 3g7u_A 75 IIGGPPCQGFS 85 (376)
T ss_dssp EEECCCCCTTC
T ss_pred EEecCCCCCcc
Confidence 99999977664
No 309
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.56 E-value=0.0012 Score=66.02 Aligned_cols=76 Identities=20% Similarity=0.138 Sum_probs=56.4
Q ss_pred CeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC-C-CceeEEEE
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI-H-SKFDIILT 366 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~-~-~~fD~Ii~ 366 (496)
.+||||.||.|.+++.+...| ...|.++|+++.+++..+.+. .+..++.+|+.++.... . ..+|+|+.
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~--------~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNF--------PHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhc--------cccccccCCHHHccHhHcCcCCcCEEEE
Confidence 479999999999999999988 468999999999999877653 23456788888764311 1 26999999
Q ss_pred cccccccc
Q psy11730 367 SETIYSVA 374 (496)
Q Consensus 367 ~~~l~~~~ 374 (496)
.++...++
T Consensus 75 gpPCq~fS 82 (343)
T 1g55_A 75 SPPCQPFT 82 (343)
T ss_dssp CCC-----
T ss_pred cCCCcchh
Confidence 99976664
No 310
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=96.55 E-value=0.0032 Score=60.37 Aligned_cols=80 Identities=15% Similarity=0.116 Sum_probs=52.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-------cC------CeEEEEeCCH---HHHHHhcCc-----------ccc-------
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-------GA------AHVSFQDYNQ---EVIESLTLP-----------NIL------- 334 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-------~~------~~v~giD~s~---~~i~~a~~~-----------~~~------- 334 (496)
++.+|||||||+|..++.+++. ++ .+++++|..+ +++..+... ...
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 3468999999999999997654 33 4899999766 555543221 100
Q ss_pred ---c-ccCCCCceEEEecccCCccccCCC----ceeEEEEcc
Q psy11730 335 ---M-NTDNLEKCKFYHGDWGSLSAVIHS----KFDIILTSE 368 (496)
Q Consensus 335 ---~-~~~~~~~v~~~~~d~~~~~~~~~~----~fD~Ii~~~ 368 (496)
. -.....+++++.+|+.+....... .||+|+...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~ 181 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG 181 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC
Confidence 0 011235788999998875433233 799999964
No 311
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.50 E-value=0.004 Score=61.87 Aligned_cols=76 Identities=17% Similarity=0.118 Sum_probs=59.8
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEcc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~ 368 (496)
.+.+|+||.||.|.+++.+...|...|.++|+++.+++..+.+... . ..+|+.++....-..+|+|+..+
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~--------~--~~~Di~~~~~~~~~~~D~l~~gp 79 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGE--------K--PEGDITQVNEKTIPDHDILCAGF 79 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSC--------C--CBSCGGGSCGGGSCCCSEEEEEC
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCC--------C--CcCCHHHcCHhhCCCCCEEEECC
Confidence 4568999999999999999999999999999999999887655311 1 15777766543234699999999
Q ss_pred cccccc
Q psy11730 369 TIYSVA 374 (496)
Q Consensus 369 ~l~~~~ 374 (496)
+...++
T Consensus 80 PCQ~fS 85 (327)
T 2c7p_A 80 PCQAFS 85 (327)
T ss_dssp CCTTTC
T ss_pred CCCCcc
Confidence 888774
No 312
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=96.48 E-value=0.0023 Score=61.34 Aligned_cols=57 Identities=21% Similarity=0.134 Sum_probs=46.8
Q ss_pred hHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcc
Q psy11730 275 TFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPN 332 (496)
Q Consensus 275 ~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~ 332 (496)
...|++.+.+....++..|||.+||+|..++.+.+.| .+++|+|+++.+++.++++.
T Consensus 198 p~~l~~~~i~~~~~~~~~vlD~f~GsGtt~~~a~~~g-r~~ig~e~~~~~~~~~~~r~ 254 (260)
T 1g60_A 198 PRDLIERIIRASSNPNDLVLDCFMGSGTTAIVAKKLG-RNFIGCDMNAEYVNQANFVL 254 (260)
T ss_dssp CHHHHHHHHHHHCCTTCEEEESSCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CeEEEEeCCHHHHHHHHHHH
Confidence 4566666665555678899999999999999977666 68999999999999988765
No 313
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=96.45 E-value=0.0041 Score=65.92 Aligned_cols=93 Identities=16% Similarity=0.133 Sum_probs=61.7
Q ss_pred HHHHHHHhCCC-CCCCeEEEecCcCCHHHHHHHHcc--------------CCeEEEEeCCHHHHHHhcCcccccccCCCC
Q psy11730 277 DLLNFIKDNVA-VDKLSVLDVGCGAGLLGLYTLMNG--------------AAHVSFQDYNQEVIESLTLPNILMNTDNLE 341 (496)
Q Consensus 277 ~l~~~l~~~~~-~~~~~VLDlGcGtG~~~~~la~~~--------------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~ 341 (496)
.+++++.+... ..+.+|+|-+||||.+.+.+...- ...++|+|+++.++..|+-+....+ ..
T Consensus 204 ~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg---~~ 280 (530)
T 3ufb_A 204 PVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHG---LE 280 (530)
T ss_dssp HHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHT---CS
T ss_pred HHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcC---Cc
Confidence 44555555443 347799999999999988865421 2459999999999998875533221 23
Q ss_pred ceEEEecccCCccccC---CCceeEEEEcccccc
Q psy11730 342 KCKFYHGDWGSLSAVI---HSKFDIILTSETIYS 372 (496)
Q Consensus 342 ~v~~~~~d~~~~~~~~---~~~fD~Ii~~~~l~~ 372 (496)
...+..+|....+... ...||+|++++|+.-
T Consensus 281 ~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~ 314 (530)
T 3ufb_A 281 YPRIDPENSLRFPLREMGDKDRVDVILTNPPFGG 314 (530)
T ss_dssp CCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSC
T ss_pred cccccccccccCchhhhcccccceEEEecCCCCc
Confidence 3455666654432211 247999999999953
No 314
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.40 E-value=0.0055 Score=62.00 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=54.9
Q ss_pred CCeEEEecCcCCHHHHHHHHc-----------------cC-CeEEEEeCC-----------HHHHHHhcCcccccccCCC
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMN-----------------GA-AHVSFQDYN-----------QEVIESLTLPNILMNTDNL 340 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~-----------------~~-~~v~giD~s-----------~~~i~~a~~~~~~~~~~~~ 340 (496)
.-+|+|+|||+|.+++.+... .+ -+|+..|+. +.+.+.+++.. +..
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~-----g~~ 127 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKEN-----GRK 127 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHT-----CCC
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhc-----cCC
Confidence 358999999999999988764 12 467888877 55444332111 111
Q ss_pred CceEEEecccCCcc--ccCCCceeEEEEccccccccchH
Q psy11730 341 EKCKFYHGDWGSLS--AVIHSKFDIILTSETIYSVANYN 377 (496)
Q Consensus 341 ~~v~~~~~d~~~~~--~~~~~~fD~Ii~~~~l~~~~~~~ 377 (496)
.+..|+.+...++- ..+.++||+|+|+.++|++.+.+
T Consensus 128 ~~~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p 166 (384)
T 2efj_A 128 IGSCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVP 166 (384)
T ss_dssp TTSEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSC
T ss_pred CCceEEEecchhhhhccCCCCceEEEEecceeeecCCCc
Confidence 23456666555531 22378999999999999997665
No 315
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=96.26 E-value=0.0044 Score=62.11 Aligned_cols=75 Identities=17% Similarity=0.101 Sum_probs=57.3
Q ss_pred chHHHHHHHHhCCCCC-------CCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEE
Q psy11730 274 CTFDLLNFIKDNVAVD-------KLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKF 345 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~~-------~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~ 345 (496)
....+++.|.+...+. +..|||||.|.|.++..|+..+ +++|+++|+++.++...+... ...++++
T Consensus 36 ~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~------~~~~l~i 109 (353)
T 1i4w_A 36 WNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF------EGSPLQI 109 (353)
T ss_dssp CCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT------TTSSCEE
T ss_pred CCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc------cCCCEEE
Confidence 3445556665554432 4789999999999999999864 578999999999998876543 1368999
Q ss_pred EecccCCcc
Q psy11730 346 YHGDWGSLS 354 (496)
Q Consensus 346 ~~~d~~~~~ 354 (496)
+.+|+.++.
T Consensus 110 i~~D~l~~~ 118 (353)
T 1i4w_A 110 LKRDPYDWS 118 (353)
T ss_dssp ECSCTTCHH
T ss_pred EECCccchh
Confidence 999986653
No 316
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=96.20 E-value=0.0055 Score=61.56 Aligned_cols=128 Identities=14% Similarity=0.061 Sum_probs=87.5
Q ss_pred CCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCccccccc---CCCCceEEEecccCCccccCCCceeE
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNT---DNLEKCKFYHGDWGSLSAVIHSKFDI 363 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~---~~~~~v~~~~~d~~~~~~~~~~~fD~ 363 (496)
.+|.+|||++||.|.=+..+++.+. ..|+++|+++.-+..++++...... ....++.+...|...+.....+.||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 3588999999999999999998776 5899999999988877655433221 13357888888887766544678999
Q ss_pred EEEccccccc------cc--------hHh----------Hhhe-e-eecCCCCCcccEEEeeccCCcccccccchhhHhc
Q psy11730 364 ILTSETIYSV------AN--------YNK----------LLTV-W-CLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIY 417 (496)
Q Consensus 364 Ii~~~~l~~~------~~--------~~~----------~~~~-~-~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (496)
|++..+..-. .+ .+. ++.. + .+.|+|. ++|..-.....+....+.+|...+
T Consensus 227 VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~---LVYsTCSl~~~ENE~vV~~~L~~~ 303 (359)
T 4fzv_A 227 VLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGH---VVYSTCSLSHLQNEYVVQGAIELL 303 (359)
T ss_dssp EEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEE---EEEEESCCCTTTTHHHHHHHHHHH
T ss_pred EEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcE---EEEEeCCCchhhCHHHHHHHHHhC
Confidence 9986554321 11 111 1111 1 5567664 677776666667777888776544
Q ss_pred C
Q psy11730 418 P 418 (496)
Q Consensus 418 ~ 418 (496)
+
T Consensus 304 ~ 304 (359)
T 4fzv_A 304 A 304 (359)
T ss_dssp H
T ss_pred C
Confidence 3
No 317
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=96.02 E-value=0.015 Score=54.96 Aligned_cols=90 Identities=17% Similarity=0.036 Sum_probs=55.7
Q ss_pred CceeeecchHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcCcccccccCCC-Cce-
Q psy11730 267 GGYKIWECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNG-AAHVSFQDYNQEVIESLTLPNILMNTDNL-EKC- 343 (496)
Q Consensus 267 ~~~~~~~~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~-~~v- 343 (496)
++|+ ..+++.|.+.-.+.+--++.+||||||+-|.++..+++.. ...|.|.++.... .. ... ... .++
T Consensus 52 g~yR-SRAayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~-~P~------~~~~~Gv~ 122 (269)
T 2px2_A 52 GHPV-SRGTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HE-EPM------LMQSYGWN 122 (269)
T ss_dssp SCCS-STHHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SC-CCC------CCCSTTGG
T ss_pred CCcc-cHHHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-cc-CCC------cccCCCce
Confidence 4454 6677888888888633448899999999999999987751 2334444443321 00 000 001 233
Q ss_pred --EEEec-ccCCccccCCCceeEEEEcc
Q psy11730 344 --KFYHG-DWGSLSAVIHSKFDIILTSE 368 (496)
Q Consensus 344 --~~~~~-d~~~~~~~~~~~fD~Ii~~~ 368 (496)
.|..+ |+.++. ...+|+|+|..
T Consensus 123 ~i~~~~G~Df~~~~---~~~~DvVLSDM 147 (269)
T 2px2_A 123 IVTMKSGVDVFYKP---SEISDTLLCDI 147 (269)
T ss_dssp GEEEECSCCGGGSC---CCCCSEEEECC
T ss_pred EEEeeccCCccCCC---CCCCCEEEeCC
Confidence 44446 887643 45899999954
No 318
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.94 E-value=0.0092 Score=59.04 Aligned_cols=74 Identities=20% Similarity=0.245 Sum_probs=60.8
Q ss_pred eEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEccccc
Q psy11730 292 SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIY 371 (496)
Q Consensus 292 ~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~~~l~ 371 (496)
+||||.||.|.+++-+-+.|...|.++|+++.+++..+.+. .-.++.+|+.++....-...|+|+..++..
T Consensus 2 kvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~---------~~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ 72 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNH---------SAKLIKGDISKISSDEFPKCDGIIGGPPSQ 72 (331)
T ss_dssp EEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHC---------CSEEEESCGGGCCGGGSCCCSEEECCCCGG
T ss_pred eEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHC---------CCCcccCChhhCCHhhCCcccEEEecCCCC
Confidence 69999999999999998999988999999999988766543 135678898887654346799999999888
Q ss_pred ccc
Q psy11730 372 SVA 374 (496)
Q Consensus 372 ~~~ 374 (496)
.++
T Consensus 73 ~fS 75 (331)
T 3ubt_Y 73 SWS 75 (331)
T ss_dssp GTE
T ss_pred CcC
Confidence 774
No 319
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=95.78 E-value=0.012 Score=59.34 Aligned_cols=88 Identities=14% Similarity=0.122 Sum_probs=51.4
Q ss_pred CCeEEEecCcCCHHHHHHHH--------cc-------C-CeEEEEeCCHHHHHHhcCccccc---------ccCCCCceE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLM--------NG-------A-AHVSFQDYNQEVIESLTLPNILM---------NTDNLEKCK 344 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~--------~~-------~-~~v~giD~s~~~i~~a~~~~~~~---------~~~~~~~v~ 344 (496)
.-+|+|+|||+|.+++.++. .. + -+|+..|+........=+..... ......+-.
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 45899999999999998732 11 2 56888887665532211110000 000011223
Q ss_pred EEecccCC---ccccCCCceeEEEEccccccccchHh
Q psy11730 345 FYHGDWGS---LSAVIHSKFDIILTSETIYSVANYNK 378 (496)
Q Consensus 345 ~~~~d~~~---~~~~~~~~fD~Ii~~~~l~~~~~~~~ 378 (496)
|+.+...+ -.+ ++++||+|+|+.++|++++.+.
T Consensus 133 f~~gvpgSFy~rlf-P~~S~d~v~Ss~aLHWls~~p~ 168 (374)
T 3b5i_A 133 FVAGVPGSFYRRLF-PARTIDFFHSAFSLHWLSQVPE 168 (374)
T ss_dssp EEEEEESCTTSCCS-CTTCEEEEEEESCTTBCSSCCG
T ss_pred EEEecChhhhcccC-CCcceEEEEecceeeeeccCch
Confidence 44443333 222 3789999999999999975543
No 320
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=95.53 E-value=0.015 Score=58.40 Aligned_cols=80 Identities=16% Similarity=0.069 Sum_probs=61.0
Q ss_pred CCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccC-----CCCceEEEecccCCcccc---CCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD-----NLEKCKFYHGDWGSLSAV---IHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~-----~~~~v~~~~~d~~~~~~~---~~~~ 360 (496)
++++||=||-|.|.....+++....+|+.+|+++++++.+++.....+.. ..++++++.+|.-+.... ..+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~ 284 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 284 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCc
Confidence 46899999999999999998887789999999999999998764332211 124688999997655421 1468
Q ss_pred eeEEEEcc
Q psy11730 361 FDIILTSE 368 (496)
Q Consensus 361 fD~Ii~~~ 368 (496)
||+|+...
T Consensus 285 yDvIIvDl 292 (381)
T 3c6k_A 285 FDYVINDL 292 (381)
T ss_dssp EEEEEEEC
T ss_pred eeEEEECC
Confidence 99999863
No 321
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.25 E-value=0.0077 Score=60.42 Aligned_cols=84 Identities=17% Similarity=0.296 Sum_probs=57.5
Q ss_pred CeEEEecCcCCHHHHHHHHc----------------cC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCc
Q psy11730 291 LSVLDVGCGAGLLGLYTLMN----------------GA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSL 353 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~----------------~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~ 353 (496)
-+|+|+||++|..++.+... .+ -+|+..|+.......+-+...... ...+..|+.+...++
T Consensus 53 ~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~--~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 53 LAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN--DVDGVCFINGVPGSF 130 (359)
T ss_dssp ECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC--SCTTCEEEEEEESCS
T ss_pred eEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc--ccCCCEEEEecchhh
Confidence 47999999999998876543 12 578999988888776655432111 001345566554443
Q ss_pred ---cccCCCceeEEEEccccccccchH
Q psy11730 354 ---SAVIHSKFDIILTSETIYSVANYN 377 (496)
Q Consensus 354 ---~~~~~~~fD~Ii~~~~l~~~~~~~ 377 (496)
.+ +.+++|+|+|+.++|++...+
T Consensus 131 y~rlf-p~~S~d~v~Ss~aLHWls~~p 156 (359)
T 1m6e_X 131 YGRLF-PRNTLHFIHSSYSLMWLSQVP 156 (359)
T ss_dssp SSCCS-CTTCBSCEEEESCTTBCSSCC
T ss_pred hhccC-CCCceEEEEehhhhhhcccCc
Confidence 33 378999999999999997644
No 322
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=94.95 E-value=0.029 Score=54.76 Aligned_cols=78 Identities=15% Similarity=0.105 Sum_probs=60.2
Q ss_pred CCeEEEecCcCCHHHHHHHHccCCe--EEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC---CCceeEE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGAAH--VSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI---HSKFDII 364 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~~~--v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~~fD~I 364 (496)
+-+|+||.||.|.+++.+.+.|... |.++|+++.+++..+.+. +...++.+|+.++.... .+.+|+|
T Consensus 16 ~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~--------~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 16 PIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRH--------QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHT--------TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhC--------CCCceeCCChHHccHHHhcccCCcCEE
Confidence 4589999999999999998898866 799999999987655432 23456788888765321 2469999
Q ss_pred EEccccccccc
Q psy11730 365 LTSETIYSVAN 375 (496)
Q Consensus 365 i~~~~l~~~~~ 375 (496)
+..++...++.
T Consensus 88 ~ggpPCQ~fS~ 98 (295)
T 2qrv_A 88 IGGSPCNDLSI 98 (295)
T ss_dssp EECCCCGGGBT
T ss_pred EecCCCccccc
Confidence 99998888753
No 323
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=94.84 E-value=0.02 Score=56.84 Aligned_cols=75 Identities=16% Similarity=0.123 Sum_probs=58.2
Q ss_pred eEEEecCcCCHHHHHHHHccC--CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC--CCceeEEEEc
Q psy11730 292 SVLDVGCGAGLLGLYTLMNGA--AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--HSKFDIILTS 367 (496)
Q Consensus 292 ~VLDlGcGtG~~~~~la~~~~--~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~Ii~~ 367 (496)
+|+||.||.|.+++.+...|. ..|.++|+++.+++..+.+. +...++.+|+.++.... ...+|+|+..
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~--------~~~~~~~~DI~~~~~~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNF--------PETNLLNRNIQQLTPQVIKKWNVDTILMS 76 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHC--------TTSCEECCCGGGCCHHHHHHTTCCEEEEC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhC--------CCCceeccccccCCHHHhccCCCCEEEec
Confidence 799999999999999888886 66889999999988766543 23345778887765321 2369999999
Q ss_pred ccccccc
Q psy11730 368 ETIYSVA 374 (496)
Q Consensus 368 ~~l~~~~ 374 (496)
++...++
T Consensus 77 pPCQ~fS 83 (333)
T 4h0n_A 77 PPCQPFT 83 (333)
T ss_dssp CCCCCSE
T ss_pred CCCcchh
Confidence 8888774
No 324
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=94.45 E-value=0.075 Score=54.70 Aligned_cols=42 Identities=24% Similarity=0.249 Sum_probs=36.9
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCC
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHT 469 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~ 469 (496)
+...+.++|+|||.++++.|-+|.|.+.+-++.+..|+...+
T Consensus 309 gIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t 350 (510)
T 4ask_A 309 NIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLT 350 (510)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSS
T ss_pred CCCeEEEEECCCCEEEECCCceEEEEecCeeeeeEEEecCCC
Confidence 445677899999999999999999999999888888887665
No 325
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.04 E-value=0.042 Score=54.44 Aligned_cols=74 Identities=12% Similarity=-0.041 Sum_probs=56.5
Q ss_pred CeEEEecCcCCHHHHHHHHccC--CeE-EEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC--CCceeEEE
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGA--AHV-SFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI--HSKFDIIL 365 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~--~~v-~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~Ii 365 (496)
-+|+||.||.|.+++.+.+.|. ..| .++|+++.+++..+.+.. .. ++.+|+.++.... ...+|+|+
T Consensus 11 ~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~--------~~-~~~~DI~~~~~~~i~~~~~Dil~ 81 (327)
T 3qv2_A 11 VNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFK--------EE-VQVKNLDSISIKQIESLNCNTWF 81 (327)
T ss_dssp EEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHC--------CC-CBCCCTTTCCHHHHHHTCCCEEE
T ss_pred CEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCC--------CC-cccCChhhcCHHHhccCCCCEEE
Confidence 3899999999999999988885 567 799999999987665431 11 4567777764321 12699999
Q ss_pred Eccccccc
Q psy11730 366 TSETIYSV 373 (496)
Q Consensus 366 ~~~~l~~~ 373 (496)
..++...+
T Consensus 82 ggpPCQ~f 89 (327)
T 3qv2_A 82 MSPPCQPY 89 (327)
T ss_dssp ECCCCTTC
T ss_pred ecCCccCc
Confidence 99998877
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.72 E-value=0.072 Score=52.56 Aligned_cols=57 Identities=14% Similarity=0.080 Sum_probs=46.5
Q ss_pred hHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcc
Q psy11730 275 TFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPN 332 (496)
Q Consensus 275 ~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~ 332 (496)
...|++.+......+|..|||-.||+|..+.++.+.| .+.+|+|+++..++.++.+.
T Consensus 238 p~~l~~~~i~~~~~~~~~VlDpF~GsGtt~~aa~~~g-r~~ig~e~~~~~~~~~~~r~ 294 (323)
T 1boo_A 238 PAKLPEFFIRMLTEPDDLVVDIFGGSNTTGLVAERES-RKWISFEMKPEYVAASAFRF 294 (323)
T ss_dssp CTHHHHHHHHHHCCTTCEEEETTCTTCHHHHHHHHTT-CEEEEEESCHHHHHHHHGGG
T ss_pred CHHHHHHHHHHhCCCCCEEEECCCCCCHHHHHHHHcC-CCEEEEeCCHHHHHHHHHHH
Confidence 3456666665555578899999999999999966665 68999999999999988875
No 327
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.64 E-value=0.048 Score=56.82 Aligned_cols=79 Identities=11% Similarity=0.129 Sum_probs=59.2
Q ss_pred CeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--------------
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-------------- 356 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------------- 356 (496)
-+|+||.||.|.+++-+.+.|...|.++|+++.+++..+.+. ...++..++.+|+.++...
T Consensus 89 ~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~-----~~~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANH-----YCDPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHS-----CCCTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred ceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhc-----ccCCCcceeccchhhhhhccccccchhhHHhhh
Confidence 489999999999999988888888999999999987765432 1123455677887765421
Q ss_pred --CCCceeEEEEcccccccc
Q psy11730 357 --IHSKFDIILTSETIYSVA 374 (496)
Q Consensus 357 --~~~~fD~Ii~~~~l~~~~ 374 (496)
....+|+|+..++...++
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS 183 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFS 183 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC-
T ss_pred hhcCCCCCEEEecCCCcchh
Confidence 124689999999888775
No 328
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=93.12 E-value=0.083 Score=51.09 Aligned_cols=80 Identities=13% Similarity=-0.017 Sum_probs=54.3
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc------CCeEEEEeCCHH--------------------------HHHHhcCcccccc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG------AAHVSFQDYNQE--------------------------VIESLTLPNILMN 336 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~------~~~v~giD~s~~--------------------------~i~~a~~~~~~~~ 336 (496)
..+.|||+||..|..++.++... ..+|+++|..+. .++.++++...
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~-- 183 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRN-- 183 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHH--
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHH--
Confidence 46799999999999999987531 468999996432 12333322211
Q ss_pred cCC-CCceEEEecccCCccccC-CCceeEEEEcccc
Q psy11730 337 TDN-LEKCKFYHGDWGSLSAVI-HSKFDIILTSETI 370 (496)
Q Consensus 337 ~~~-~~~v~~~~~d~~~~~~~~-~~~fD~Ii~~~~l 370 (496)
.+. ..+++++.+++.+..... .++||+|+...-.
T Consensus 184 ~gl~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD~ 219 (282)
T 2wk1_A 184 YDLLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL 219 (282)
T ss_dssp TTCCSTTEEEEESCHHHHSTTCCCCCEEEEEECCCS
T ss_pred cCCCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCCc
Confidence 122 378999999987654332 4789999997644
No 329
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=92.85 E-value=0.12 Score=52.63 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=47.7
Q ss_pred CCCeEEEecCcCCHHHHHHH-HccC--CeEEEEeCCHHHHHHhcCccccc-ccCCC-CceEEEecccCC
Q psy11730 289 DKLSVLDVGCGAGLLGLYTL-MNGA--AHVSFQDYNQEVIESLTLPNILM-NTDNL-EKCKFYHGDWGS 352 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la-~~~~--~~v~giD~s~~~i~~a~~~~~~~-~~~~~-~~v~~~~~d~~~ 352 (496)
++..|+||||+.|.+++.++ +.+. ++|+++|+++...+.++++.... | ... .+++++..-+.+
T Consensus 226 ~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N-~~~~~~v~~~~~al~~ 293 (409)
T 2py6_A 226 DSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTD-TNFASRITVHGCGAGE 293 (409)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTT-STTGGGEEEECSEECS
T ss_pred CCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhc-cCCCCCEEEEEeEEEC
Confidence 57899999999999999987 4443 79999999999999888765431 1 123 677777765543
No 330
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=92.03 E-value=0.65 Score=44.74 Aligned_cols=75 Identities=19% Similarity=0.226 Sum_probs=48.6
Q ss_pred HHHHHHHHhC-CC-CCCCeEEEecCc------CCHHHHHHHHccCC--eEEEEeCCHHHHHHhcCcccccccCCCCceEE
Q psy11730 276 FDLLNFIKDN-VA-VDKLSVLDVGCG------AGLLGLYTLMNGAA--HVSFQDYNQEVIESLTLPNILMNTDNLEKCKF 345 (496)
Q Consensus 276 ~~l~~~l~~~-~~-~~~~~VLDlGcG------tG~~~~~la~~~~~--~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~ 345 (496)
..|.++|... .. ..|.+|||||+| -|. ..+.+.++. .|+++|+.+-.. ..+ .+
T Consensus 94 tqlcqyl~~~~~~vp~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------------da~-~~ 156 (344)
T 3r24_A 94 TQLCQYLNTLTLAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------------DAD-ST 156 (344)
T ss_dssp HHHHHHHTTSCCCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------------SSS-EE
T ss_pred HHHHHHhccccEeecCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------------CCC-eE
Confidence 3567777442 23 348999999973 344 344555663 899999886221 122 44
Q ss_pred EecccCCccccCCCceeEEEEccc
Q psy11730 346 YHGDWGSLSAVIHSKFDIILTSET 369 (496)
Q Consensus 346 ~~~d~~~~~~~~~~~fD~Ii~~~~ 369 (496)
+++|..++.. .+.||+|+|..+
T Consensus 157 IqGD~~~~~~--~~k~DLVISDMA 178 (344)
T 3r24_A 157 LIGDCATVHT--ANKWDLIISDMY 178 (344)
T ss_dssp EESCGGGEEE--SSCEEEEEECCC
T ss_pred EEcccccccc--CCCCCEEEecCC
Confidence 8899765443 578999999544
No 331
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=91.81 E-value=0.13 Score=50.73 Aligned_cols=58 Identities=14% Similarity=0.100 Sum_probs=47.2
Q ss_pred chHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCH---HHHHHhcCcc
Q psy11730 274 CTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQ---EVIESLTLPN 332 (496)
Q Consensus 274 ~~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~---~~i~~a~~~~ 332 (496)
-...|++.+......+|..|||-.||+|..+.++.+.| .+.+|+|+++ ..++.++++.
T Consensus 227 kp~~l~~~~i~~~~~~~~~vlDpF~GsGtt~~aa~~~~-r~~ig~e~~~~~~~~~~~~~~Rl 287 (319)
T 1eg2_A 227 KPAAVIERLVRALSHPGSTVLDFFAGSGVTARVAIQEG-RNSICTDAAPVFKEYYQKQLTFL 287 (319)
T ss_dssp CCHHHHHHHHHHHSCTTCEEEETTCTTCHHHHHHHHHT-CEEEEEESSTHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHhCCCCCEEEecCCCCCHHHHHHHHcC-CcEEEEECCccHHHHHHHHHHHH
Confidence 44566666666555678899999999999999976665 6799999999 9998887765
No 332
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=90.19 E-value=0.28 Score=55.47 Aligned_cols=76 Identities=16% Similarity=0.132 Sum_probs=55.7
Q ss_pred CeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc---------------
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS--------------- 354 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~--------------- 354 (496)
-+++||.||.|.+++-+.+.|. ..|.++|+++.+++..+.+. ++..++.+|+.++.
T Consensus 541 l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~~di~~~~~~~ 612 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNN--------PGSTVFTEDCNILLKLVMAGETTNSRGQR 612 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHHHTCSBCTTCCB
T ss_pred CeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC--------CCCccccccHHHHhhhccchhhhhhhhhh
Confidence 4899999999999999988897 67889999999988765443 23445555543220
Q ss_pred ccCCCceeEEEEcccccccc
Q psy11730 355 AVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 355 ~~~~~~fD~Ii~~~~l~~~~ 374 (496)
....+.+|+|+..++...++
T Consensus 613 lp~~~~vDll~GGpPCQ~FS 632 (1002)
T 3swr_A 613 LPQKGDVEMLCGGPPCQGFS 632 (1002)
T ss_dssp CCCTTTCSEEEECCCCTTCC
T ss_pred cccCCCeeEEEEcCCCcchh
Confidence 11135799999988877764
No 333
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=86.38 E-value=0.66 Score=51.32 Aligned_cols=43 Identities=19% Similarity=0.184 Sum_probs=35.8
Q ss_pred CCeEEEecCcCCHHHHHHHHcc------CCeEEEEeCCHHHHHHhcCcc
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNG------AAHVSFQDYNQEVIESLTLPN 332 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~------~~~v~giD~s~~~i~~a~~~~ 332 (496)
..+||||.||.|.+++-+.+.| ...+.++|+++.+++.-+.+.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3489999999999999987776 467899999999998766553
No 334
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=83.87 E-value=1.2 Score=51.84 Aligned_cols=77 Identities=17% Similarity=0.147 Sum_probs=55.2
Q ss_pred CCeEEEecCcCCHHHHHHHHccC-CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc--------------
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS-------------- 354 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~-------------- 354 (496)
.-+++||.||.|.+++-+.+.|. ..|.++|+++.+++..+.+. ++..++.+|+.++.
T Consensus 851 ~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~--------p~~~~~~~DI~~l~~~~~~gdi~~~~~~ 922 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNN--------PGTTVFTEDCNVLLKLVMAGEVTNSLGQ 922 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHC--------TTSEEECSCHHHHHHHHTTTCSBCSSCC
T ss_pred CceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhC--------CCCcEeeccHHHHhHhhhccchhhhhhh
Confidence 44899999999999999988887 67899999999988765442 23344444433210
Q ss_pred -ccCCCceeEEEEcccccccc
Q psy11730 355 -AVIHSKFDIILTSETIYSVA 374 (496)
Q Consensus 355 -~~~~~~fD~Ii~~~~l~~~~ 374 (496)
....+.+|+|+..++...++
T Consensus 923 ~lp~~~~vDvl~GGpPCQ~FS 943 (1330)
T 3av4_A 923 RLPQKGDVEMLCGGPPCQGFS 943 (1330)
T ss_dssp BCCCTTTCSEEEECCCCTTTC
T ss_pred hccccCccceEEecCCCcccc
Confidence 01124689999988887774
No 335
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=82.33 E-value=1.2 Score=45.06 Aligned_cols=41 Identities=12% Similarity=0.011 Sum_probs=34.2
Q ss_pred CeEEEecCcCCHHHHHHHHccC--Ce----EEEEeCCHHHHHHhcCc
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNGA--AH----VSFQDYNQEVIESLTLP 331 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~~--~~----v~giD~s~~~i~~a~~~ 331 (496)
-+||||.||.|...+.+.+.|. .. |.++|+++.++..-+.+
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n 57 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAI 57 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHH
Confidence 4899999999999999988873 44 88999999988765544
No 336
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=82.17 E-value=0.66 Score=57.88 Aligned_cols=95 Identities=14% Similarity=0.021 Sum_probs=45.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc------CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCcee
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG------AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFD 362 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~------~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD 362 (496)
...+|||||.|+|..+..+.... ...++.+|+|+.+.+.++++.... .+..-.-|..+........||
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~------di~~~~~d~~~~~~~~~~~yd 1313 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL------HVTQGQWDPANPAPGSLGKAD 1313 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH------TEEEECCCSSCCCC-----CC
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc------ccccccccccccccCCCCcee
Confidence 35699999999998766554321 247899999998888777664211 111111122111000145799
Q ss_pred EEEEccccccccchHhHhhee--eecCCC
Q psy11730 363 IILTSETIYSVANYNKLLTVW--CLFPTH 389 (496)
Q Consensus 363 ~Ii~~~~l~~~~~~~~~~~~~--~l~p~~ 389 (496)
+|++..++|-.++....+... .|.|++
T Consensus 1314 lvia~~vl~~t~~~~~~l~~~~~lL~p~G 1342 (2512)
T 2vz8_A 1314 LLVCNCALATLGDPAVAVGNMAATLKEGG 1342 (2512)
T ss_dssp EEEEECC--------------------CC
T ss_pred EEEEcccccccccHHHHHHHHHHhcCCCc
Confidence 999999998887777766652 455554
No 337
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=73.89 E-value=1.4 Score=34.98 Aligned_cols=25 Identities=20% Similarity=0.001 Sum_probs=21.9
Q ss_pred hhhhccCCceeeeCCcceEEEEeee
Q psy11730 432 LELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 432 ~e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
.+..+.+|+.+|+|.|-||.+.|..
T Consensus 59 ~~~~l~~G~~~~ip~G~~H~~~N~g 83 (98)
T 3lag_A 59 SLAQLKTGRSYARKAGVQHDVRNES 83 (98)
T ss_dssp ECCCBCTTCCEEECTTCEEEEBCCS
T ss_pred EEEEecCCcEEEEcCCCcEECEECC
Confidence 3456799999999999999999984
No 338
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=73.77 E-value=2.6 Score=42.94 Aligned_cols=76 Identities=16% Similarity=0.267 Sum_probs=46.1
Q ss_pred CCeEEEecCcCCHHHHHHHHc----c--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCcee-
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMN----G--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFD- 362 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~----~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD- 362 (496)
.-.|+|+|.|+|.++.-++.. + ..+++.||+|+.+.+.-+++..........++.+.. ++ ...|.
T Consensus 138 ~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~~~~~~~v~W~~----~l----P~~~~g 209 (432)
T 4f3n_A 138 TRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGAQAPGLAARVRWLD----AL----PERFEG 209 (432)
T ss_dssp CCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHHHSTTTGGGEEEES----SC----CSCEEE
T ss_pred CCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhccccccCCCceecc----cC----CccCce
Confidence 469999999999998887542 2 357999999998876544432211001122444432 12 23354
Q ss_pred EEEEccccccc
Q psy11730 363 IILTSETIYSV 373 (496)
Q Consensus 363 ~Ii~~~~l~~~ 373 (496)
+|++++.+--+
T Consensus 210 ~iiANE~fDAl 220 (432)
T 4f3n_A 210 VVVGNEVLDAM 220 (432)
T ss_dssp EEEEESCGGGS
T ss_pred EEEeehhhccC
Confidence 77777776444
No 339
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=73.68 E-value=13 Score=37.28 Aligned_cols=74 Identities=14% Similarity=0.204 Sum_probs=46.1
Q ss_pred CCeEEEecCcCCHHHHHHHHc--------cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCce
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMN--------GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKF 361 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~--------~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~f 361 (496)
.-.|+|+|.|+|.++.-+.+. ...+++.||.|+...+.-++... ...++.+. .++++++. ..
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~-----~~~~v~W~-~~l~~lp~----~~ 150 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA-----GIRNIHWH-DSFEDVPE----GP 150 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST-----TCSSEEEE-SSGGGSCC----SS
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc-----CCCCeEEe-CChhhcCC----CC
Confidence 347999999999998877642 12379999999988875433221 11234433 23444431 24
Q ss_pred eEEEEccccccc
Q psy11730 362 DIILTSETIYSV 373 (496)
Q Consensus 362 D~Ii~~~~l~~~ 373 (496)
=+|++|+.+--+
T Consensus 151 ~~viANE~fDAl 162 (387)
T 1zkd_A 151 AVILANEYFDVL 162 (387)
T ss_dssp EEEEEESSGGGS
T ss_pred eEEEeccccccC
Confidence 578888776444
No 340
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=70.34 E-value=3.7 Score=41.19 Aligned_cols=43 Identities=28% Similarity=0.183 Sum_probs=35.8
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|||. |.++..+|+. |..+|+++|.+++.++.+++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 184 KPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3588999999986 8888888874 54589999999999988775
No 341
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=69.99 E-value=3.2 Score=40.92 Aligned_cols=44 Identities=18% Similarity=0.070 Sum_probs=37.9
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCCh
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNF 471 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~ 471 (496)
+.....++|+|||.++.-.+.+|.+.|.+.+++...||+...=+
T Consensus 258 GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl 301 (354)
T 3dxt_A 258 GIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWI 301 (354)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGH
T ss_pred CCceEEEEeCCCcEEEECCCceEEEeeccccHhHhhccCcHHHH
Confidence 45667789999999998889999999999999999999876533
No 342
>3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A
Probab=69.30 E-value=2 Score=42.46 Aligned_cols=30 Identities=33% Similarity=0.380 Sum_probs=24.7
Q ss_pred ceeeeCCcceEEEEeeeeeEEEeecccCCC
Q psy11730 440 ETVFVPGGWWHVVLNLDTTVAVTQNFCSHT 469 (496)
Q Consensus 440 e~l~iP~gWwh~v~~l~~~i~v~~~~~~~~ 469 (496)
+.++||.||||.+.|+++.-.|...+|+..
T Consensus 327 ~~~~ip~g~~h~~~n~~~~~~~~~~~~~~~ 356 (369)
T 3st7_A 327 EVVDIPVGYTHNIENLGDTDMVTIMWVNEM 356 (369)
T ss_dssp CEEEECTTEEEEEEECSSSCEEEEEEESSC
T ss_pred eEEEeCCCceEEeEEcCCCcEEEEEecCcc
Confidence 899999999999999985556777776643
No 343
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=68.95 E-value=6.6 Score=38.56 Aligned_cols=100 Identities=18% Similarity=0.176 Sum_probs=63.4
Q ss_pred CCCeEEEecCcCCHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCccccccc------------------CCCCceEEEecc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMN-GAAHVSFQDYNQEVIESLTLPNILMNT------------------DNLEKCKFYHGD 349 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~-~~~~v~giD~s~~~i~~a~~~~~~~~~------------------~~~~~v~~~~~d 349 (496)
....|+.||||.......+... ....++-||. |++++.-++....... ....+..++.+|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 3568999999999999998765 3357788888 6666543222111100 013678889899
Q ss_pred cCCccc-------c-CCCceeEEEEccccccccc--hHhHhhee-eecCCC
Q psy11730 350 WGSLSA-------V-IHSKFDIILTSETIYSVAN--YNKLLTVW-CLFPTH 389 (496)
Q Consensus 350 ~~~~~~-------~-~~~~fD~Ii~~~~l~~~~~--~~~~~~~~-~l~p~~ 389 (496)
+.+... . ......++++..++.+++. ...+++.. ..+|++
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~ 226 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHG 226 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCc
Confidence 876421 1 1256789999999999843 34445432 345543
No 344
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=65.41 E-value=9 Score=37.41 Aligned_cols=43 Identities=19% Similarity=0.107 Sum_probs=34.9
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.+|.+||=+|+|. |..+..+++....+|+++|.+++-.+.+++
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 218 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS 218 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 4588999999976 888888877555689999999988887764
No 345
>1ep0_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; racemase, DTDP-4-dehydrorhamnose epimerase, structural genomics, PSI; 1.50A {Methanothermobacterthermautotrophicus} SCOP: b.82.1.1 PDB: 1epz_A*
Probab=64.85 E-value=4.4 Score=36.25 Aligned_cols=30 Identities=23% Similarity=0.511 Sum_probs=23.4
Q ss_pred CCceeeeCCcceEEEEeeeeeEEEeecccCC
Q psy11730 438 PGETVFVPGGWWHVVLNLDTTVAVTQNFCSH 468 (496)
Q Consensus 438 ~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~ 468 (496)
.+..||||.|+||-+.++++. ++...+|+.
T Consensus 108 n~~~L~IP~G~aHgf~~lsd~-a~~~y~~s~ 137 (185)
T 1ep0_A 108 NRREFFIPEGFAHGFLALSDE-CIVNYKCTE 137 (185)
T ss_dssp TCCEEEECTTEEEEEEECSSE-EEEEEEESS
T ss_pred CCCEEEeCCCeEEEEEEcCCC-eEEEEecCC
Confidence 367899999999999999766 555555543
No 346
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=64.33 E-value=3 Score=37.40 Aligned_cols=26 Identities=31% Similarity=0.574 Sum_probs=22.8
Q ss_pred hhhhccCCceeeeCCcceEEEEeeee
Q psy11730 432 LELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 432 ~e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
....+++||++++|.+.+|.+.|..+
T Consensus 119 ~~~~l~~GD~v~ip~g~~H~~~N~g~ 144 (190)
T 1x82_A 119 KWISMEPGTVVYVPPYWAHRTVNIGD 144 (190)
T ss_dssp EEEEECTTCEEEECTTCEEEEEECSS
T ss_pred EEEEECCCcEEEECCCCeEEEEECCc
Confidence 44779999999999999999999853
No 347
>2ixk_A DTDP-4-dehydrorhamnose 3,5-epimerase; isomerase, lipopolysaccharide biosynthesis, epimerise, epimerize; HET: TDO; 1.7A {Pseudomonas aeruginosa} PDB: 2ixi_A* 2ixh_A* 1rtv_A* 2ixj_A*
Probab=63.30 E-value=4.9 Score=35.95 Aligned_cols=30 Identities=17% Similarity=0.221 Sum_probs=23.4
Q ss_pred CCceeeeCCcceEEEEeeeeeEEEeecccCC
Q psy11730 438 PGETVFVPGGWWHVVLNLDTTVAVTQNFCSH 468 (496)
Q Consensus 438 ~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~ 468 (496)
.+..||||.|+||-+.++++. ++...+|+.
T Consensus 109 n~~~L~IP~G~aHgf~~lsd~-a~~~y~~s~ 138 (184)
T 2ixk_A 109 NKRQMWIPAGFAHGFVVLSEY-AEFLYKTTD 138 (184)
T ss_dssp TCCEEEECTTEEEEEEECSSE-EEEEEEESS
T ss_pred cCCEEEeCCCeEEEEEEcCCC-EEEEEeCCC
Confidence 367899999999999999766 555555543
No 348
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=63.09 E-value=6.7 Score=31.16 Aligned_cols=28 Identities=21% Similarity=0.188 Sum_probs=23.7
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEE
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVA 460 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~ 460 (496)
...+++||++++|.+.-|...|.++...
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~~n~~~~~~ 96 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRWKVLEPVRK 96 (101)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCeeE
Confidence 3578999999999999999999876543
No 349
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=61.87 E-value=6.4 Score=33.97 Aligned_cols=29 Identities=21% Similarity=0.266 Sum_probs=23.9
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEE
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAV 461 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v 461 (496)
...++|||.+|||.|..|...|.+.+..+
T Consensus 103 ~~~l~~GD~i~iP~G~~h~~~n~~~a~~l 131 (151)
T 4axo_A 103 KVSASSGELIFIPKGSKIQFSVPDYARFI 131 (151)
T ss_dssp EEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCEEEEEeCCCEEEE
Confidence 45689999999999999999998655443
No 350
>1dzr_A DTDP-4-dehydrorhamnose 3\,5-epimerase; isomerase, 3\,5-hexulose epimerase; 2.17A {Salmonella typhimurium} SCOP: b.82.1.1 PDB: 1dzt_A*
Probab=61.39 E-value=5.6 Score=35.50 Aligned_cols=29 Identities=17% Similarity=0.253 Sum_probs=22.1
Q ss_pred CCceeeeCCcceEEEEeeeeeEEEeecccC
Q psy11730 438 PGETVFVPGGWWHVVLNLDTTVAVTQNFCS 467 (496)
Q Consensus 438 ~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~ 467 (496)
.+..||||.|+||-+.++++. ++...+|+
T Consensus 108 n~~~L~IP~G~aHgf~~lsd~-a~~~y~~s 136 (183)
T 1dzr_A 108 NKRQLWIPEGFAHGFVTLSEY-AEFLYKAT 136 (183)
T ss_dssp TCCEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCCEEEeCCCeEEEEEEcCCC-eEEEEEcC
Confidence 367899999999999999765 44444443
No 351
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=60.54 E-value=7.2 Score=38.52 Aligned_cols=43 Identities=26% Similarity=0.249 Sum_probs=35.0
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|||. |..+..+++. |...|+++|.+++.++.+++
T Consensus 189 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~ 233 (371)
T 1f8f_A 189 TPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ 233 (371)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3588999999986 8888888774 44579999999999888764
No 352
>3ejk_A DTDP sugar isomerase; YP_390184.1, structural genomics, JOIN for structural genomics, JCSG; HET: CIT; 1.95A {Desulfovibrio desulfuricans subsp}
Probab=60.41 E-value=4.1 Score=36.07 Aligned_cols=30 Identities=17% Similarity=0.137 Sum_probs=22.6
Q ss_pred CCceeeeCCcceEEEEeeeeeEEEeecccC
Q psy11730 438 PGETVFVPGGWWHVVLNLDTTVAVTQNFCS 467 (496)
Q Consensus 438 ~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~ 467 (496)
+...||||.|+||-+.++++.-++...+|+
T Consensus 112 n~~~L~IP~G~aHgf~~lsd~~av~ly~~s 141 (174)
T 3ejk_A 112 NYRLLRIPPQVWYGFAATGDTPALVANCTD 141 (174)
T ss_dssp BCEEEEECTTCEEEEEECTTSCEEEEEEES
T ss_pred CceEEEeCCCcEEEEEEccCCCEEEEEECC
Confidence 567999999999999999763344444444
No 353
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=59.94 E-value=11 Score=33.72 Aligned_cols=25 Identities=32% Similarity=0.521 Sum_probs=22.4
Q ss_pred hhhhccCCceeeeCCcceEEEEeee
Q psy11730 432 LELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 432 ~e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
+...+++||++++|.|.+|.+.|.+
T Consensus 119 ~~~~l~~GD~~~iP~g~~H~~~N~g 143 (201)
T 1fi2_A 119 YSRVVRAGETFVIPRGLMHFQFNVG 143 (201)
T ss_dssp EEEEEETTCEEEECTTCCEEEEECS
T ss_pred EEEEECCCCEEEECCCCeEEEEeCC
Confidence 3567899999999999999999984
No 354
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=58.75 E-value=16 Score=35.39 Aligned_cols=44 Identities=14% Similarity=0.037 Sum_probs=36.5
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~~ 331 (496)
.++.+||-+|+|. |..+..+++....+|+++|.+++..+.+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 4588999999986 8888888876556999999999998887653
No 355
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=57.98 E-value=7.1 Score=30.11 Aligned_cols=29 Identities=17% Similarity=0.271 Sum_probs=23.9
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEE
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAV 461 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v 461 (496)
...+.+||++++|.+-.|.+.+.+++..+
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~l 97 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMAKEECKIM 97 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEcCCCCEEE
Confidence 45689999999999999999998655443
No 356
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=57.35 E-value=9.9 Score=37.26 Aligned_cols=43 Identities=26% Similarity=0.315 Sum_probs=34.7
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |.++..+++. |..+|+++|.+++.++.+++
T Consensus 170 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 170 TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 3588999999985 8888888774 44589999999998887764
No 357
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=56.75 E-value=14 Score=39.77 Aligned_cols=78 Identities=15% Similarity=0.121 Sum_probs=50.7
Q ss_pred CeEEEecCcCCHHHHHHHHcc----------C---CeEEEEeC---CHHHHHHhcCccccc----------------c--
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNG----------A---AHVSFQDY---NQEVIESLTLPNILM----------------N-- 336 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~----------~---~~v~giD~---s~~~i~~a~~~~~~~----------------~-- 336 (496)
-+|+|+|.|+|...+.+.+.. . -+++.+|. +.+.+..+....... +
T Consensus 60 ~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 139 (689)
T 3pvc_A 60 CIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGCH 139 (689)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEEE
T ss_pred eEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCce
Confidence 489999999999999886631 1 46899998 666665433221100 0
Q ss_pred ----cCCCCceEEEecccCCccccC----CCceeEEEEcc
Q psy11730 337 ----TDNLEKCKFYHGDWGSLSAVI----HSKFDIILTSE 368 (496)
Q Consensus 337 ----~~~~~~v~~~~~d~~~~~~~~----~~~fD~Ii~~~ 368 (496)
....-.+++..+|+.+..... ...+|.++...
T Consensus 140 r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~ 179 (689)
T 3pvc_A 140 RILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDG 179 (689)
T ss_dssp EEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECS
T ss_pred EEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECC
Confidence 011236778888987655433 36899999844
No 358
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=56.26 E-value=4.8 Score=31.76 Aligned_cols=25 Identities=16% Similarity=0.161 Sum_probs=21.8
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+.+||++++|.+-.|.+.|.++
T Consensus 63 ~~~l~~Gd~~~i~~~~~H~~~~~~~ 87 (113)
T 2gu9_A 63 TQALQAGSLIAIERGQAHEIRNTGD 87 (113)
T ss_dssp EEEECTTEEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEcCCC
Confidence 3568999999999999999999753
No 359
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=56.24 E-value=9.6 Score=37.99 Aligned_cols=42 Identities=19% Similarity=0.127 Sum_probs=36.7
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCC
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHT 469 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~ 469 (496)
+.....++|+|||.++.=.+-+|.+.|.+-+++...||+...
T Consensus 276 GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~ 317 (381)
T 2ox0_A 276 GIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRR 317 (381)
T ss_dssp TCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTT
T ss_pred CCceEEEEecCCCEEEECCCcEEEeecCcccHHHHhccCcHH
Confidence 456677899999999988888999999999999999998764
No 360
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=56.22 E-value=5.4 Score=30.76 Aligned_cols=24 Identities=38% Similarity=0.482 Sum_probs=21.4
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|.+
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~ 91 (105)
T 1v70_A 68 EALLAPGMAAFAPAGAPHGVRNES 91 (105)
T ss_dssp EEEECTTCEEEECTTSCEEEECCS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCC
Confidence 356899999999999999999975
No 361
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=56.12 E-value=5.4 Score=35.25 Aligned_cols=24 Identities=17% Similarity=0.242 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.|..|.+.|.+
T Consensus 84 ~~~l~~GDv~~~P~g~~H~~~N~g 107 (178)
T 1dgw_A 84 TYKLDQGDAIKIQAGTPFYLINPD 107 (178)
T ss_dssp EEEEETTEEEEECTTCCEEEEECC
T ss_pred EEEECCCCEEEECCCCeEEEEeCC
Confidence 356899999999999999999984
No 362
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=55.70 E-value=9.2 Score=37.91 Aligned_cols=44 Identities=20% Similarity=0.173 Sum_probs=35.7
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCCh
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNF 471 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~ 471 (496)
+.....++|+|||.++.=.+-+|.+.|.+-+++...||+...=+
T Consensus 301 GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl 344 (373)
T 3opt_A 301 GIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWL 344 (373)
T ss_dssp TCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC---
T ss_pred CCceEEEEECCCCEEEECCCceEEEEecCccHHHHHccCcHHHH
Confidence 55667789999998887777899999999999999999876533
No 363
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=55.36 E-value=18 Score=29.87 Aligned_cols=68 Identities=16% Similarity=0.076 Sum_probs=43.4
Q ss_pred CCeEEEecCcCCHHHHHHHH---ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLM---NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDI 363 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~---~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~ 363 (496)
.++|+=+||| .++..+++ .....|+++|.+++.++.++.. .+.++.+|..+... .....+|+
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~----------~~~~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE----------GFDAVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------TCEEEECCTTCHHHHHHSCCTTCSE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC----------CCcEEECCCCCHHHHHhCCcccCCE
Confidence 4578888885 45555543 2235799999999988776532 34567777665321 11246888
Q ss_pred EEEccc
Q psy11730 364 ILTSET 369 (496)
Q Consensus 364 Ii~~~~ 369 (496)
|+..-.
T Consensus 74 vi~~~~ 79 (141)
T 3llv_A 74 VLITGS 79 (141)
T ss_dssp EEECCS
T ss_pred EEEecC
Confidence 887544
No 364
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=54.58 E-value=12 Score=37.40 Aligned_cols=43 Identities=26% Similarity=0.217 Sum_probs=35.1
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|||. |.++..+|+. |+..|+++|.+++.++.+++
T Consensus 184 ~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 184 GPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 3588999999876 8888888874 54589999999999888764
No 365
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=53.93 E-value=9.4 Score=37.51 Aligned_cols=43 Identities=19% Similarity=0.036 Sum_probs=33.3
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |.++..+++....+|+++|.+++.++.+++
T Consensus 178 ~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~ 221 (360)
T 1piw_A 178 GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK 221 (360)
T ss_dssp STTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 3588999999864 777777777544579999999887777654
No 366
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=53.80 E-value=10 Score=30.15 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=25.5
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEeec
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQN 464 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~ 464 (496)
...+++||.+++|++-.|.+.|.+++.-+...
T Consensus 77 ~~~l~~Gd~i~i~~~~~H~~~~~~~~~~~~i~ 108 (114)
T 2ozj_A 77 KIDLVPEDVLMVPAHKIHAIAGKGRFKMLQIT 108 (114)
T ss_dssp EEEECTTCEEEECTTCCBEEEEEEEEEEEEEE
T ss_pred EEEecCCCEEEECCCCcEEEEeCCCcEEEEEE
Confidence 35689999999999999999998766544433
No 367
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.34 E-value=24 Score=30.60 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=41.1
Q ss_pred CCCCeEEEecCcCCHHHHHHHH---cc-CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcc---cc-CCC
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM---NG-AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLS---AV-IHS 359 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~---~~-~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~---~~-~~~ 359 (496)
..+.+|+=+||| ..+..+++ .. ...|+++|.+++.++.++.. .+.++.+|..+.. .. ...
T Consensus 37 ~~~~~v~IiG~G--~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~----------g~~~~~gd~~~~~~l~~~~~~~ 104 (183)
T 3c85_A 37 PGHAQVLILGMG--RIGTGAYDELRARYGKISLGIEIREEAAQQHRSE----------GRNVISGDATDPDFWERILDTG 104 (183)
T ss_dssp CTTCSEEEECCS--HHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT----------TCCEEECCTTCHHHHHTBCSCC
T ss_pred CCCCcEEEECCC--HHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC----------CCCEEEcCCCCHHHHHhccCCC
Confidence 346688888875 44444432 22 45799999999988765532 2344666654321 11 134
Q ss_pred ceeEEEEc
Q psy11730 360 KFDIILTS 367 (496)
Q Consensus 360 ~fD~Ii~~ 367 (496)
.+|+|+..
T Consensus 105 ~ad~vi~~ 112 (183)
T 3c85_A 105 HVKLVLLA 112 (183)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEe
Confidence 68888874
No 368
>2c0z_A NOVW; isomerase, epimerase, antibiotic biosynthesis, RMLC-like cupin; 1.60A {Streptomyces sphaeroides} SCOP: b.82.1.1
Probab=52.69 E-value=9.3 Score=34.99 Aligned_cols=28 Identities=18% Similarity=0.198 Sum_probs=21.3
Q ss_pred CceeeeCCcceEEEEeeeeeEEEeecccC
Q psy11730 439 GETVFVPGGWWHVVLNLDTTVAVTQNFCS 467 (496)
Q Consensus 439 Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~ 467 (496)
+..||||.|+||-+.++++. ++...+|+
T Consensus 117 ~~~L~IP~G~aHgF~~Lsd~-a~~ly~~s 144 (216)
T 2c0z_A 117 RRAVYLSEGIGHGFCAISDE-ATLCYLSS 144 (216)
T ss_dssp CCEEEECTTEEEEEEECSSE-EEEEEEES
T ss_pred CCEEEeCCCeeEEEEEcCCC-eEEEEecC
Confidence 57899999999999999765 34444443
No 369
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=52.46 E-value=12 Score=29.36 Aligned_cols=26 Identities=19% Similarity=0.162 Sum_probs=22.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
...+.+||.+++|.|-.|.+.|.+.+
T Consensus 68 ~~~l~~Gd~~~ip~~~~H~~~~~~~~ 93 (107)
T 2i45_A 68 SMTIREGEMAVVPKSVSHRPRSENGC 93 (107)
T ss_dssp EEEECTTEEEEECTTCCEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEeeEeCCCe
Confidence 46789999999999999999996544
No 370
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=52.28 E-value=11 Score=30.02 Aligned_cols=28 Identities=21% Similarity=0.175 Sum_probs=23.9
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEE
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVA 460 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~ 460 (496)
...+.+||++++|.+-.|.+.|.+++..
T Consensus 73 ~~~l~~Gd~~~ip~~~~H~~~~~~~~~~ 100 (116)
T 2pfw_A 73 IKVLTAGDSFFVPPHVDHGAVCPTGGIL 100 (116)
T ss_dssp EEEECTTCEEEECTTCCEEEEESSCEEE
T ss_pred EEEeCCCCEEEECcCCceeeEeCCCcEE
Confidence 4568999999999999999999876543
No 371
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=52.14 E-value=6.3 Score=33.36 Aligned_cols=24 Identities=25% Similarity=0.401 Sum_probs=21.8
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|..
T Consensus 89 ~~~l~~Gd~i~ip~g~~H~~~n~~ 112 (148)
T 2oa2_A 89 QEEVFDDYAILIPAGTWHNVRNTG 112 (148)
T ss_dssp EEEEETTCEEEECTTCEEEEEECS
T ss_pred eEEECCCCEEEECCCCcEEEEECC
Confidence 467899999999999999999984
No 372
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=51.61 E-value=8.6 Score=35.81 Aligned_cols=46 Identities=9% Similarity=0.270 Sum_probs=34.0
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee-EEEeeccc----------CCCChhhHHHHh
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT-VAVTQNFC----------SHTNFPVVYHKT 478 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~-i~v~~~~~----------~~~~~~~~~~~~ 478 (496)
...+.|||++++|.|-.|.+.|.++. ..+.+.++ ++..++..+...
T Consensus 103 ~~~l~~GD~i~iP~g~~H~~~N~~~~~~~~~l~~~~~~~~~~~~~~p~~~e~~f~~l 159 (239)
T 2xlg_A 103 SIQSEPKQLIYSPNHYMHGFVNPTDKTLPIVFVWMRNEVAPDFPYHDGGMREYFQAV 159 (239)
T ss_dssp EEECCTTEEEEECTTEEEEEECCSSSCEEEEEEEEECSSCTTCSCTTCSHHHHHHHH
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCEEEEEEEEecccChhhccCcchHHHHHHHh
Confidence 56799999999999999999998543 22323444 667777777655
No 373
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=51.59 E-value=5.5 Score=32.40 Aligned_cols=25 Identities=16% Similarity=0.121 Sum_probs=21.9
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+++||++++|.+-+|.+.|.++
T Consensus 80 ~~~l~~Gd~~~i~~~~~H~~~n~~~ 104 (125)
T 3h8u_A 80 VTHLKAGDIAIAKPGQVHGAMNSGP 104 (125)
T ss_dssp EEEEETTEEEEECTTCCCEEEECSS
T ss_pred EEEeCCCCEEEECCCCEEEeEeCCC
Confidence 4568999999999999999999853
No 374
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=51.41 E-value=11 Score=33.23 Aligned_cols=26 Identities=19% Similarity=0.174 Sum_probs=22.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
++.+.|||.+.||.|-||.+.+.+.+
T Consensus 120 ~i~L~pGesvtIppg~~H~f~ageeg 145 (175)
T 2y0o_A 120 EIELEPGGQYTIPPNTKHWFQAGEEG 145 (175)
T ss_dssp EEEECTTCEEEECTTCCEEEEEEEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCC
Confidence 45799999999999999999995444
No 375
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=50.38 E-value=6.9 Score=30.38 Aligned_cols=24 Identities=25% Similarity=0.170 Sum_probs=21.7
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||.+++|.+-.|.+.|..
T Consensus 60 ~~~l~~Gd~~~~p~~~~H~~~N~g 83 (97)
T 2fqp_A 60 TSQLTRGVSYTRPEGVEHNVINPS 83 (97)
T ss_dssp EEEECTTCCEEECTTCEEEEECCS
T ss_pred EEEEcCCCEEEeCCCCcccCEeCC
Confidence 457899999999999999999985
No 376
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=49.99 E-value=26 Score=29.50 Aligned_cols=70 Identities=19% Similarity=0.172 Sum_probs=39.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHH---ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCce
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM---NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKF 361 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~---~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~f 361 (496)
..+.+|+=+||| .++..+++ .....|+++|.+++.++.++.. ..+.++.+|..+... ..-..+
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~---------~g~~~~~~d~~~~~~l~~~~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGHSVVVVDKNEYAFHRLNSE---------FSGFTVVGDAAEFETLKECGMEKA 85 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTT---------CCSEEEESCTTSHHHHHTTTGGGC
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhc---------CCCcEEEecCCCHHHHHHcCcccC
Confidence 357789999875 44443332 2235899999998776554311 123345555433211 102468
Q ss_pred eEEEEcc
Q psy11730 362 DIILTSE 368 (496)
Q Consensus 362 D~Ii~~~ 368 (496)
|+|+..-
T Consensus 86 d~Vi~~~ 92 (155)
T 2g1u_A 86 DMVFAFT 92 (155)
T ss_dssp SEEEECS
T ss_pred CEEEEEe
Confidence 8888753
No 377
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=49.69 E-value=12 Score=36.90 Aligned_cols=43 Identities=23% Similarity=0.139 Sum_probs=34.3
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |.++..+|+....+|+++|.+++.++.+++
T Consensus 193 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 193 GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 3588999999985 778888777555579999999988887664
No 378
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=49.24 E-value=13 Score=29.81 Aligned_cols=23 Identities=35% Similarity=0.404 Sum_probs=21.4
Q ss_pred hhccCCceeeeCCcceEEEEeee
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
..+++||.+++|++--|.+.|.+
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n~~ 97 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAWTD 97 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEEEC
T ss_pred EEECCCCEEEECCCCcEEEEeCC
Confidence 67899999999999999999985
No 379
>1upi_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, PSI, protein structure initiative, TB structural genomics consortium, TB; HET: CME; 1.7A {Mycobacterium tuberculosis} SCOP: b.82.1.1 PDB: 2ixc_A* 1pm7_A*
Probab=49.15 E-value=10 Score=34.94 Aligned_cols=27 Identities=26% Similarity=0.489 Sum_probs=20.7
Q ss_pred CceeeeCCcceEEEEeeeeeEEEeeccc
Q psy11730 439 GETVFVPGGWWHVVLNLDTTVAVTQNFC 466 (496)
Q Consensus 439 Ge~l~iP~gWwh~v~~l~~~i~v~~~~~ 466 (496)
+..||||.|+||-+.++++. ++...+|
T Consensus 128 ~~~L~IP~G~aHgF~~Lsd~-a~vly~~ 154 (225)
T 1upi_A 128 RRTIYVSEGLAHGFLALQDN-STVMYLC 154 (225)
T ss_dssp CCEEEECTTCEEEEEECSSS-EEEEEEE
T ss_pred CcEEEeCCCeeEEEEEcCCC-EEEEEec
Confidence 57899999999999999655 3444433
No 380
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=48.94 E-value=34 Score=32.99 Aligned_cols=91 Identities=10% Similarity=-0.084 Sum_probs=57.6
Q ss_pred CCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc--c------CCCce
Q psy11730 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA--V------IHSKF 361 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~--~------~~~~f 361 (496)
...|++||||-=.....+..-....|+=+| -++.++..++...........+..++.+|+.+ .. . .....
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 357999999988876665421225889999 47777765444322222245678888898875 21 0 01345
Q ss_pred eEEEEccccccccch--HhHhhe
Q psy11730 362 DIILTSETIYSVANY--NKLLTV 382 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~--~~~~~~ 382 (496)
-++++..+++|++.. ..+++.
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~ 203 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTE 203 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHH
T ss_pred EEEEEechHhhCCHHHHHHHHHH
Confidence 678889999998653 334443
No 381
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=48.85 E-value=30 Score=29.96 Aligned_cols=44 Identities=14% Similarity=-0.008 Sum_probs=34.9
Q ss_pred HHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccC-CeEEEEeC
Q psy11730 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGA-AHVSFQDY 320 (496)
Q Consensus 277 ~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~-~~v~giD~ 320 (496)
..+++.......-..-|||+|-|+|..--.|.+..+ ..|+.+|-
T Consensus 28 ~~L~~a~~~v~~~~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 28 ACLEHAIAQTAGLSGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp HHHHHHHHHTTTCCSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred HHHHHHHHHhcCCCCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 456666666555567899999999999999888777 68888883
No 382
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=48.11 E-value=13 Score=29.81 Aligned_cols=28 Identities=18% Similarity=0.194 Sum_probs=23.9
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEE
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVA 460 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~ 460 (496)
...+++||.+++|.+-.|.+.|.+++..
T Consensus 75 ~~~l~~Gd~i~ip~~~~H~~~~~~~~~~ 102 (114)
T 3fjs_A 75 QRRLHQGDLLYLGAGAAHDVNAITNTSL 102 (114)
T ss_dssp EEEECTTEEEEECTTCCEEEEESSSEEE
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCcEE
Confidence 4578999999999999999999976543
No 383
>1oi6_A PCZA361.16; epimerase, vancomycin group antibiotic, EVAD, isomerase; HET: TMP; 1.4A {Amycolatopsis orientalis} SCOP: b.82.1.1 PDB: 1ofn_A* 1wa4_A
Probab=48.03 E-value=10 Score=34.47 Aligned_cols=27 Identities=22% Similarity=0.380 Sum_probs=20.6
Q ss_pred CceeeeCCcceEEEEeeeeeEEEeeccc
Q psy11730 439 GETVFVPGGWWHVVLNLDTTVAVTQNFC 466 (496)
Q Consensus 439 Ge~l~iP~gWwh~v~~l~~~i~v~~~~~ 466 (496)
+..||||.|+||-+.++++. ++....|
T Consensus 109 ~~~L~IP~G~aHgf~~lsd~-a~~~y~~ 135 (205)
T 1oi6_A 109 PRAVYLPVGVGHAFVALEDD-TVMSYML 135 (205)
T ss_dssp CCEEEECTTCEEEEEECSTT-EEEEEEE
T ss_pred CCEEEeCCCeeEEEEEccCC-eEEEEec
Confidence 57899999999999999655 3444444
No 384
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=48.01 E-value=17 Score=35.38 Aligned_cols=43 Identities=21% Similarity=0.205 Sum_probs=34.0
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |..+..+++....+|+++|.+++.++.+++
T Consensus 167 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 167 QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN 210 (352)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 3588999999875 777777777544569999999998887764
No 385
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=48.00 E-value=17 Score=29.63 Aligned_cols=24 Identities=29% Similarity=0.574 Sum_probs=21.1
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.|-.|.+.|.+
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~~~~ 101 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIRSHE 101 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEEcCC
Confidence 356899999999999999998874
No 386
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=47.74 E-value=9.4 Score=30.10 Aligned_cols=25 Identities=24% Similarity=0.062 Sum_probs=22.3
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
+..+++||++++|.|-.|.+.|..+
T Consensus 60 ~~~l~aGd~~~~p~G~~H~~~N~g~ 84 (98)
T 2ozi_A 60 LAQLKTGRSYARKAGVQHDVRNEST 84 (98)
T ss_dssp CCCBCTTCCEEECTTCEEEEEECSS
T ss_pred EEEECCCCEEEECCCCceeCEECCC
Confidence 5678999999999999999999853
No 387
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=47.70 E-value=15 Score=35.70 Aligned_cols=42 Identities=10% Similarity=-0.021 Sum_probs=34.3
Q ss_pred CCCeEEEecCcC-CHHHHHHHHcc--CCeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGCGA-GLLGLYTLMNG--AAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGcGt-G~~~~~la~~~--~~~v~giD~s~~~i~~a~~ 330 (496)
++.+||-+|+|. |.++..+|+.. ..+|+++|.|++-++.+++
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE 214 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH
Confidence 788999999975 77777777754 4579999999998887764
No 388
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=47.27 E-value=14 Score=32.59 Aligned_cols=43 Identities=16% Similarity=0.030 Sum_probs=31.8
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||..|+ |.|.....+++....+|+++|.+++..+.+++
T Consensus 37 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~~ 81 (198)
T 1pqw_A 37 SPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR 81 (198)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT
T ss_pred CCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 35789999994 45666666665444589999999988877654
No 389
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=46.76 E-value=16 Score=28.84 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=24.0
Q ss_pred hhccCCceeeeCCcceEEEEeeeeeEEEe
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLDTTVAVT 462 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~ 462 (496)
..+.+||++++|.+-.|.+.|.+++.-+.
T Consensus 80 ~~l~~Gd~~~ip~~~~H~~~~~~~~~~~~ 108 (115)
T 1yhf_A 80 YRVAEGQTIVMPAGIPHALYAVEAFQMLL 108 (115)
T ss_dssp EEEETTCEEEECTTSCEEEEESSCEEEEE
T ss_pred EEECCCCEEEECCCCCEEEEECCCceEEE
Confidence 56899999999999999999987554333
No 390
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=46.75 E-value=9.2 Score=38.46 Aligned_cols=24 Identities=21% Similarity=0.264 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
.+..++||++++|.+.||.+.|..
T Consensus 333 ~~~~~~GD~~~iP~g~~H~~~N~g 356 (394)
T 3bu7_A 333 RFDWSEHDIFCVPAWTWHEHCNTQ 356 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECC
T ss_pred EEEEeCCCEEEECCCCeEEeEeCC
Confidence 466899999999999999999975
No 391
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=45.98 E-value=14 Score=30.42 Aligned_cols=28 Identities=11% Similarity=0.096 Sum_probs=24.1
Q ss_pred hhccCCceeeeCCcceEEEEeeeeeEEE
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLDTTVAV 461 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~~~i~v 461 (496)
+.+++||.+++|.|.-|...|.+..-.+
T Consensus 89 ~~l~~GD~~~ip~g~~h~~~~~~~~rK~ 116 (123)
T 3bcw_A 89 HAVKAGDAFIMPEGYTGRWEVDRHVKKI 116 (123)
T ss_dssp EEEETTCEEEECTTCCCEEEEEEEEEEE
T ss_pred EEECCCCEEEECCCCeEEEEECCceeEE
Confidence 5689999999999999999998765543
No 392
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=45.79 E-value=7.7 Score=38.16 Aligned_cols=25 Identities=24% Similarity=0.376 Sum_probs=22.3
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+++||++++|.+.+|.+.|.+.
T Consensus 279 ~~~l~~GD~~~ip~~~~H~~~n~~~ 303 (361)
T 2vqa_A 279 VSRLQQGDVGYVPKGYGHAIRNSSQ 303 (361)
T ss_dssp EEEECTTCEEEECTTCEEEEECCSS
T ss_pred EEEECCCCEEEECCCCeEEeEECCC
Confidence 5678999999999999999999853
No 393
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=44.88 E-value=13 Score=28.99 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=22.8
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
...+.+||++++|.+-.|.+.|.+++
T Consensus 75 ~~~l~~Gd~~~ip~~~~H~~~~~~~~ 100 (110)
T 2q30_A 75 VIPAPRGAVLVAPISTPHGVRAVTDM 100 (110)
T ss_dssp EEEECTTEEEEEETTSCEEEEESSSE
T ss_pred EEEECCCCEEEeCCCCcEEEEEcCCc
Confidence 35789999999999999999998664
No 394
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=44.79 E-value=13 Score=35.89 Aligned_cols=44 Identities=14% Similarity=0.126 Sum_probs=32.3
Q ss_pred hhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhhHHHHh
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKT 478 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~~~~~~ 478 (496)
..+++||++++|.+-+|.+.|.++. ..-..+.++..+...+...
T Consensus 87 ~~l~~Gd~~~~p~~~~H~~~n~~~~-~~~~~~~~p~~~~~~~~~~ 130 (337)
T 1y3t_A 87 YLLISGDYANIPAGTPHSYRMQSHR-TRLVSYTMKGNVAHLYSVI 130 (337)
T ss_dssp EEECTTCEEEECTTCCEEEEECSTT-EEEEEEEETTSSTHHHHHH
T ss_pred EEECCCCEEEECCCCcEEEEECCCC-eEEEEEECCCCHHHHHHHh
Confidence 5689999999999999999998654 2333445566777665443
No 395
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=44.77 E-value=8.5 Score=38.30 Aligned_cols=24 Identities=21% Similarity=0.358 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
++..++||++++|.|.||.+.|.+
T Consensus 143 ~~~~~~GD~v~iP~g~~H~~~N~g 166 (368)
T 3nw4_A 143 PVRMSRGDLLLTPGWCFHGHMNDT 166 (368)
T ss_dssp EEEEETTCEEEECTTCCEEEEECS
T ss_pred EEEEeCCCEEEECCCCcEEeEeCC
Confidence 566899999999999999999973
No 396
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=44.29 E-value=21 Score=34.96 Aligned_cols=43 Identities=21% Similarity=0.202 Sum_probs=35.1
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||=+|+|. |..+..+++....+|+++|.+++-++.+++
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~ 231 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFA 231 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHH
Confidence 3588999999886 888888877655689999999998887764
No 397
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=44.29 E-value=19 Score=34.88 Aligned_cols=44 Identities=20% Similarity=0.248 Sum_probs=36.2
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~~ 331 (496)
.++.+||=+|+|. |..+..+++. |..+|+++|.+++-++.+++.
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 3588999999976 8888888765 478999999999999887653
No 398
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=43.99 E-value=30 Score=37.06 Aligned_cols=78 Identities=15% Similarity=0.118 Sum_probs=49.6
Q ss_pred CeEEEecCcCCHHHHHHHHcc-----------C--CeEEEEeC---CHHHHHHhcCccccc----------------c--
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNG-----------A--AHVSFQDY---NQEVIESLTLPNILM----------------N-- 336 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~-----------~--~~v~giD~---s~~~i~~a~~~~~~~----------------~-- 336 (496)
-+|||+|-|+|...+...+.. . -+++++|. +.+.+..+....... +
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 389999999999999876531 1 36899998 888877443321110 0
Q ss_pred ----cCCCCceEEEecccCCccccC----CCceeEEEEcc
Q psy11730 337 ----TDNLEKCKFYHGDWGSLSAVI----HSKFDIILTSE 368 (496)
Q Consensus 337 ----~~~~~~v~~~~~d~~~~~~~~----~~~fD~Ii~~~ 368 (496)
......+++..+|+.+..... ...||+|+...
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~ 187 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDG 187 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECC
Confidence 001234566777876544432 36799999844
No 399
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=43.88 E-value=9.5 Score=32.87 Aligned_cols=25 Identities=24% Similarity=0.315 Sum_probs=21.8
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+.+||++++|.+-+|.+.|..+
T Consensus 83 ~~~l~~Gd~i~ip~~~~H~~~n~g~ 107 (156)
T 3kgz_A 83 ISDVAQGDLVFIPPMTWHQFRANRG 107 (156)
T ss_dssp EEEEETTCEEEECTTCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCC
Confidence 3568999999999999999999753
No 400
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=43.81 E-value=20 Score=34.96 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=34.9
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccC-CeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGA-AHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~-~~v~giD~s~~~i~~a~~~ 331 (496)
.++.+||=+|+|. |.++..+|+... .+|+++|.+++.++.+++.
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 4588999999876 888888877544 5899999999988877653
No 401
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=43.71 E-value=14 Score=29.92 Aligned_cols=25 Identities=28% Similarity=0.465 Sum_probs=22.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+.+||++++|.+-.|.+.|.+.
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~~ 104 (126)
T 4e2g_A 80 TRVLRPGMAYTIPGGVRHRARTFED 104 (126)
T ss_dssp EEEECTTEEEEECTTCCEEEECCTT
T ss_pred EEEeCCCCEEEECCCCcEEeEECCC
Confidence 3568999999999999999999876
No 402
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=43.14 E-value=34 Score=28.25 Aligned_cols=66 Identities=11% Similarity=0.039 Sum_probs=41.7
Q ss_pred CCeEEEecCcCCHHHHHHHH---ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc---CCCceeE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLM---NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV---IHSKFDI 363 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~---~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~~fD~ 363 (496)
..+|+=+||| .++..+++ .....|+++|.+++.++.++.. .+.++.+|..+.... ....+|+
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~----------g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER----------GVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT----------TCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc----------CCCEEECCCCCHHHHHhcCcccCCE
Confidence 3467778875 44444433 3335799999999998876532 355677876653221 1246888
Q ss_pred EEEc
Q psy11730 364 ILTS 367 (496)
Q Consensus 364 Ii~~ 367 (496)
|++.
T Consensus 75 vi~~ 78 (140)
T 3fwz_A 75 LILT 78 (140)
T ss_dssp EEEC
T ss_pred EEEE
Confidence 8864
No 403
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=43.05 E-value=49 Score=32.35 Aligned_cols=73 Identities=16% Similarity=0.227 Sum_probs=44.1
Q ss_pred CCCeEEEecCcCCHHHHHHHHcc--CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCceeEE
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLMNG--AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSKFDII 364 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~~~--~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~I 364 (496)
+..+||=||| |..+..+++.- ...|+..|.+.+.++.++.. +..+..|+.+.... .-...|+|
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~-----------~~~~~~d~~d~~~l~~~~~~~DvV 81 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF-----------ATPLKVDASNFDKLVEVMKEFELV 81 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT-----------SEEEECCTTCHHHHHHHHTTCSEE
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc-----------CCcEEEecCCHHHHHHHHhCCCEE
Confidence 3458999998 55555554422 25799999999998876643 23355565543211 12568999
Q ss_pred EEcc-cccccc
Q psy11730 365 LTSE-TIYSVA 374 (496)
Q Consensus 365 i~~~-~l~~~~ 374 (496)
++.- +.+|..
T Consensus 82 i~~~p~~~~~~ 92 (365)
T 3abi_A 82 IGALPGFLGFK 92 (365)
T ss_dssp EECCCGGGHHH
T ss_pred EEecCCcccch
Confidence 9843 444433
No 404
>1wlt_A 176AA long hypothetical DTDP-4-dehydrorhamnose 3, 5-epimerase; jelly roll-like topology, flattened barrel, isomerase; 1.90A {Sulfolobus tokodaii} SCOP: b.82.1.1 PDB: 2b9u_A
Probab=42.86 E-value=18 Score=32.59 Aligned_cols=22 Identities=18% Similarity=0.362 Sum_probs=19.0
Q ss_pred cCCceeeeCCcceEEEEeeeee
Q psy11730 437 GPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 437 ~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
+.+..||||.|+||-+.++++.
T Consensus 125 en~~~L~IP~G~aHgf~~lsd~ 146 (196)
T 1wlt_A 125 ENHYMLWIPPGFAHGFQALEDS 146 (196)
T ss_dssp TTCCEEEECTTEEEEEEESSSE
T ss_pred CCCCEEEeCCCeEEEEEEcCCC
Confidence 3568899999999999999764
No 405
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=42.75 E-value=90 Score=24.00 Aligned_cols=70 Identities=14% Similarity=0.220 Sum_probs=44.0
Q ss_pred CCeEEEecCcCCHHHHHHH----HccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCceeE
Q psy11730 290 KLSVLDVGCGAGLLGLYTL----MNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSKFDI 363 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la----~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~fD~ 363 (496)
+++|+=+|+ |..+..++ +.|..+|+++|.+++.++.+.. ..+.+...|+.+.... .-..+|+
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~----------~~~~~~~~d~~~~~~~~~~~~~~d~ 72 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR----------MGVATKQVDAKDEAGLAKALGGFDA 72 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT----------TTCEEEECCTTCHHHHHHHTTTCSE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh----------CCCcEEEecCCCHHHHHHHHcCCCE
Confidence 468898998 55555443 3554689999999988776542 2345566666543211 1246899
Q ss_pred EEEccccc
Q psy11730 364 ILTSETIY 371 (496)
Q Consensus 364 Ii~~~~l~ 371 (496)
|+..-+..
T Consensus 73 vi~~~~~~ 80 (118)
T 3ic5_A 73 VISAAPFF 80 (118)
T ss_dssp EEECSCGG
T ss_pred EEECCCch
Confidence 88865543
No 406
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=42.46 E-value=18 Score=35.54 Aligned_cols=43 Identities=23% Similarity=0.278 Sum_probs=33.8
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |..+..+|+. |..+|+++|.+++.++.+++
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 235 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKV 235 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 3588999999875 7777777765 44589999999988887764
No 407
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=41.70 E-value=13 Score=32.21 Aligned_cols=24 Identities=17% Similarity=0.278 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-+|.+.|..
T Consensus 95 ~~~l~~Gd~i~ip~~~~H~~~n~~ 118 (167)
T 3ibm_A 95 VEPLTPLDCVYIAPHAWHQIHATG 118 (167)
T ss_dssp EEEECTTCEEEECTTCCEEEEEES
T ss_pred EEEECCCCEEEECCCCcEEEEeCC
Confidence 456899999999999999999986
No 408
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=41.54 E-value=27 Score=33.45 Aligned_cols=45 Identities=18% Similarity=0.100 Sum_probs=33.4
Q ss_pred HHHHHhC---CCCCCCeEEEecCcCCHHHHHHHHccC-----CeEEEEeCCHH
Q psy11730 279 LNFIKDN---VAVDKLSVLDVGCGAGLLGLYTLMNGA-----AHVSFQDYNQE 323 (496)
Q Consensus 279 ~~~l~~~---~~~~~~~VLDlGcGtG~~~~~la~~~~-----~~v~giD~s~~ 323 (496)
+++|... ....+..|+-+|||.|.+...|++..+ -+.+.+|..+.
T Consensus 47 IeFLt~~~~~~~~~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~ 99 (307)
T 3mag_A 47 LFFLSKLQRHGILDGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHH 99 (307)
T ss_dssp HHHHHHHHHTTCSTTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCC
T ss_pred HHHHHHHHhcCCCCCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcc
Confidence 4555442 334567999999999999999987544 37889998554
No 409
>3ryk_A DTDP-4-dehydrorhamnose 3,5-epimerase; rhamnose pathway, STRU genomics, infectious diseases; HET: TYD; 1.63A {Bacillus anthracis str}
Probab=41.54 E-value=17 Score=33.00 Aligned_cols=22 Identities=23% Similarity=0.323 Sum_probs=18.9
Q ss_pred cCCceeeeCCcceEEEEeeeee
Q psy11730 437 GPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 437 ~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
+.+..||||.|+||-+.++++.
T Consensus 130 ~n~~~L~IP~G~aHGF~~Lsd~ 151 (205)
T 3ryk_A 130 DNHRQLLVPKGFAHGFCTLVPH 151 (205)
T ss_dssp TTCCEEEECTTEEEEEEECSSS
T ss_pred CCCCEEEeCCCceEEEEEcCCC
Confidence 3478999999999999999654
No 410
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=41.40 E-value=7.4 Score=32.05 Aligned_cols=40 Identities=20% Similarity=0.312 Sum_probs=27.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhh
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPV 473 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~ 473 (496)
...+.+||++++|.+-.|.+.|.+... ....+..+..+..
T Consensus 84 ~~~l~~Gd~~~ip~g~~H~~~~~~~~~-~~l~~~~p~~~~~ 123 (134)
T 2o8q_A 84 AVMLEAGGSAFQPPGVRHRELRHSDDL-EVLEIVSPAGFAT 123 (134)
T ss_dssp EEEEETTCEEECCTTCCEEEEEECTTC-EEEEEESSTTCCE
T ss_pred EEEecCCCEEEECCCCcEEeEeCCCCe-EEEEEECCCchhe
Confidence 457899999999999999999975332 2222344444443
No 411
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=41.38 E-value=21 Score=34.66 Aligned_cols=42 Identities=21% Similarity=0.222 Sum_probs=33.4
Q ss_pred CCCeEEEecCcC-CHHHHHHHHccC-CeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGCGA-GLLGLYTLMNGA-AHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGcGt-G~~~~~la~~~~-~~v~giD~s~~~i~~a~~ 330 (496)
++.+||-+|+|. |..+..+++... .+|+++|.+++.++.+++
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 788999999864 777777776544 489999999988887764
No 412
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=41.20 E-value=22 Score=29.56 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=21.8
Q ss_pred hhccCCceeeeCCcceEEEEeeeeeE
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLDTTV 459 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~~~i 459 (496)
..+++||.+++|.|.-|...+.+.+.
T Consensus 95 ~~l~~GD~i~~p~g~~h~~~~~~~~~ 120 (133)
T 2pyt_A 95 MIAKAGDVMFIPKGSSIEFGTPTSVR 120 (133)
T ss_dssp EEEETTCEEEECTTCEEEEEEEEEEE
T ss_pred EEECCCcEEEECCCCEEEEEeCCCEE
Confidence 46899999999999999998865543
No 413
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=41.04 E-value=12 Score=36.62 Aligned_cols=23 Identities=22% Similarity=0.479 Sum_probs=21.4
Q ss_pred hhccCCceeeeCCcceEEEEeee
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
..+++||++++|.|.+|.+.|.+
T Consensus 98 ~~l~~GD~~~ip~g~~H~~~n~~ 120 (361)
T 2vqa_A 98 ADVDKGGLWYFPRGWGHSIEGIG 120 (361)
T ss_dssp EEEETTEEEEECTTCEEEEEECS
T ss_pred EEEcCCCEEEECCCCeEEEEeCC
Confidence 57899999999999999999985
No 414
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=40.99 E-value=24 Score=34.86 Aligned_cols=42 Identities=17% Similarity=0.156 Sum_probs=34.2
Q ss_pred CCCeEEEecCcC-CHHHHHHHHccC-CeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGCGA-GLLGLYTLMNGA-AHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGcGt-G~~~~~la~~~~-~~v~giD~s~~~i~~a~~ 330 (496)
++.+||-+|+|. |..+..+|+... .+|++++.+++.++.+++
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~ 238 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEE 238 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHH
Confidence 488999999774 777777777555 699999999998888764
No 415
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=40.80 E-value=6.5 Score=32.02 Aligned_cols=24 Identities=4% Similarity=-0.029 Sum_probs=21.3
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|..
T Consensus 67 ~~~l~~Gd~i~i~~~~~H~~~~~~ 90 (125)
T 3cew_A 67 KIELQAGDWLRIAPDGKRQISAAS 90 (125)
T ss_dssp EEEEETTEEEEECTTCCEEEEEBT
T ss_pred EEEeCCCCEEEECCCCcEEEEcCC
Confidence 356899999999999999999973
No 416
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=40.68 E-value=13 Score=31.89 Aligned_cols=25 Identities=28% Similarity=0.227 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCc-ceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGG-WWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~g-Wwh~v~~l~~ 457 (496)
...+++||++++|.+ -.|.+.|..+
T Consensus 87 ~~~l~~Gd~i~i~~~~~~H~~~n~~~ 112 (162)
T 3l2h_A 87 QYPIAPGDFVGFPCHAAAHSISNDGT 112 (162)
T ss_dssp EEEECTTCEEEECTTSCCEEEECCSS
T ss_pred EEEeCCCCEEEECCCCceEEeEeCCC
Confidence 456899999999997 9999999753
No 417
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=40.19 E-value=19 Score=35.47 Aligned_cols=43 Identities=12% Similarity=0.106 Sum_probs=34.0
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||=+|+|. |.++..+|+. |..+|+++|.+++.++.+++
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 3588999999875 7777777764 44589999999988887764
No 418
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=39.94 E-value=21 Score=35.07 Aligned_cols=43 Identities=21% Similarity=0.196 Sum_probs=33.6
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~ 234 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKE 234 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3588999999875 7777777764 44589999999988887764
No 419
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=39.61 E-value=13 Score=35.67 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=28.5
Q ss_pred CCCCCeEEEecCcC-CH-HHHHHHHccCCeEEEEeCCH
Q psy11730 287 AVDKLSVLDVGCGA-GL-LGLYTLMNGAAHVSFQDYNQ 322 (496)
Q Consensus 287 ~~~~~~VLDlGcGt-G~-~~~~la~~~~~~v~giD~s~ 322 (496)
.+.+.+||=||||. |. .+..|+..|.++++.+|.+.
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDK 70 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCc
Confidence 35678999999994 44 55667888999999999654
No 420
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=39.44 E-value=35 Score=32.79 Aligned_cols=41 Identities=15% Similarity=-0.042 Sum_probs=33.7
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHh
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESL 328 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a 328 (496)
.++++||-.|| |.|..+..+++....+|++++.+++.++.+
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~ 190 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFL 190 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 35889999998 458888887775556999999999988877
No 421
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=39.12 E-value=22 Score=34.95 Aligned_cols=43 Identities=21% Similarity=0.195 Sum_probs=33.7
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||=+|+|. |.++..+|+. |+.+|+++|.+++.++.+++
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 238 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKA 238 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3588999999875 7777777765 44589999999988887764
No 422
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=39.09 E-value=11 Score=31.11 Aligned_cols=24 Identities=33% Similarity=0.498 Sum_probs=21.5
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|..
T Consensus 80 ~~~l~~Gd~~~ip~~~~H~~~~~~ 103 (145)
T 3ht1_A 80 TEEVGPGEAIFIPRGEPHGFVTGP 103 (145)
T ss_dssp EEEECTTCEEEECTTCCBEEECCT
T ss_pred EEEECCCCEEEECCCCeEEeEcCC
Confidence 456899999999999999999974
No 423
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=39.00 E-value=26 Score=34.24 Aligned_cols=43 Identities=21% Similarity=0.244 Sum_probs=34.4
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.+|.+||=+|+|. |.++..+|+. |+..|+++|.+++-.+.+++
T Consensus 178 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 222 (363)
T 3m6i_A 178 RLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE 222 (363)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 4588999999876 7888887765 44569999999999888765
No 424
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=38.96 E-value=19 Score=35.53 Aligned_cols=44 Identities=20% Similarity=0.101 Sum_probs=35.2
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~~ 331 (496)
.++.+||=+|+|. |.++..+|+. |+.+|+++|.+++-++.+++.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~l 237 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKF 237 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHc
Confidence 3588999999974 7788777764 545899999999999888754
No 425
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=38.66 E-value=48 Score=26.66 Aligned_cols=69 Identities=10% Similarity=0.185 Sum_probs=39.5
Q ss_pred CCeEEEecCcCCHHHHHHHH---ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLM---NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDI 363 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~---~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~ 363 (496)
+.+|+=+|| |..+..+++ .....|+++|.+++.++.+.... .+.++.+|..+... .....+|+
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~---------~~~~~~~d~~~~~~l~~~~~~~~d~ 72 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI---------DALVINGDCTKIKTLEDAGIEDADM 72 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC---------SSEEEESCTTSHHHHHHTTTTTCSE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc---------CcEEEEcCCCCHHHHHHcCcccCCE
Confidence 357877776 555555543 22357999999998876544210 23445566543211 11246898
Q ss_pred EEEccc
Q psy11730 364 ILTSET 369 (496)
Q Consensus 364 Ii~~~~ 369 (496)
|+..-.
T Consensus 73 vi~~~~ 78 (140)
T 1lss_A 73 YIAVTG 78 (140)
T ss_dssp EEECCS
T ss_pred EEEeeC
Confidence 887643
No 426
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=38.43 E-value=31 Score=33.38 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=34.1
Q ss_pred CCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
++++||-+|+ |.|..+..+++....+|++++.+++.++.+++
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~ 209 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA 209 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh
Confidence 5889999998 56888888877555689999999998887753
No 427
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=38.10 E-value=21 Score=35.05 Aligned_cols=43 Identities=19% Similarity=0.129 Sum_probs=33.5
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||-+|+|. |.++..+|+. |...|+++|.+++.++.+++
T Consensus 189 ~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 189 EPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 3588999999875 7777777764 44589999999988887764
No 428
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=37.75 E-value=28 Score=35.62 Aligned_cols=29 Identities=10% Similarity=0.171 Sum_probs=24.0
Q ss_pred CchhhhccCCceeeeCCcceEEEEeeeee
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
+.++..+.+||+++||.|+.|.+.|-+..
T Consensus 365 ~~~~~~l~~GDv~v~P~G~~H~~~ng~~~ 393 (459)
T 2e9q_A 365 SVFDGEVREGQVLMIPQNFVVIKRASDRG 393 (459)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEEEEE
T ss_pred EEEeeEEeCCcEEEECCCCEEEEEeCCCC
Confidence 44566799999999999999999995444
No 429
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=37.65 E-value=30 Score=33.99 Aligned_cols=44 Identities=20% Similarity=0.110 Sum_probs=34.8
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~~ 331 (496)
.++.+||=+|+|. |.++..+|+. |+..|+++|.+++..+.+++.
T Consensus 181 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 181 KAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3588999999876 7777777764 545999999999988877653
No 430
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=37.59 E-value=29 Score=33.36 Aligned_cols=42 Identities=17% Similarity=-0.038 Sum_probs=32.6
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhc
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLT 329 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~ 329 (496)
.++++||-.|| |.|..+..+++....+|+++|.+++.++.++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~ 187 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK 187 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35889999998 5677777766654458999999998887763
No 431
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=37.20 E-value=14 Score=37.66 Aligned_cols=24 Identities=21% Similarity=0.336 Sum_probs=21.8
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.|..|.+.|.+
T Consensus 104 ~~~l~~GDv~~iP~G~~H~~~N~g 127 (434)
T 2ea7_A 104 SYILEQGHAQKIPAGTTFFLVNPD 127 (434)
T ss_dssp EEEEETTEEEEECTTCEEEEEECC
T ss_pred EEEeCCCCEEEECCCccEEEEeCC
Confidence 456899999999999999999985
No 432
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=36.93 E-value=51 Score=31.25 Aligned_cols=54 Identities=20% Similarity=0.306 Sum_probs=41.7
Q ss_pred ecc-hHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHHh
Q psy11730 272 WEC-TFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESL 328 (496)
Q Consensus 272 ~~~-~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~a 328 (496)
|.. -..|+.+|....+....+.+|.-||+|..++.+. +..++..|++++.+..-
T Consensus 17 y~GgK~~l~~~i~~~lp~~~~~yvEpF~GggaV~~~~~---~~~~i~ND~n~~Lin~y 71 (284)
T 2dpm_A 17 WTGGKRQLLPVIRELIPKTYNRYFEPFVGGGALFFDLA---PKDAVINDFNAELINCY 71 (284)
T ss_dssp CTTCCGGGHHHHHHHSCSSCSCEEETTCTTCHHHHHHC---CSEEEEEESCHHHHHHH
T ss_pred cCccHHHHHHHHHHHhccccCEEEeecCCccHHHHhhh---ccceeeeecchHHHHHH
Confidence 444 3467888887776445789999999999988752 36899999999987653
No 433
>2pa7_A DTDP-6-deoxy-3,4-keto-hexulose isomerase; deoxysugar biosynthesis, S-layer biosynthesis, ketoisomerase; HET: TYD; 1.50A {Aneurinibacillus thermoaerophilus} SCOP: b.82.1.1 PDB: 2pae_A* 2pak_A* 2pam_A*
Probab=36.90 E-value=13 Score=31.61 Aligned_cols=29 Identities=17% Similarity=0.340 Sum_probs=23.2
Q ss_pred ceeeeCCcceEEEEeeeeeEEEeecccCCC
Q psy11730 440 ETVFVPGGWWHVVLNLDTTVAVTQNFCSHT 469 (496)
Q Consensus 440 e~l~iP~gWwh~v~~l~~~i~v~~~~~~~~ 469 (496)
-.|+||.|-||.+.++++. +|.+++.+..
T Consensus 87 ~gL~IppgvWh~~~~~s~~-avllvlas~~ 115 (141)
T 2pa7_A 87 VGLYVGPAVWHEMHDFSSD-CVMMVLASDY 115 (141)
T ss_dssp EEEEECTTCEEEEECCCTT-CEEEEEESSC
T ss_pred cEEEeCCCEEEEEEEcCCC-eEEEEECCCC
Confidence 4689999999999999776 7777766543
No 434
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=36.84 E-value=28 Score=33.77 Aligned_cols=42 Identities=31% Similarity=0.279 Sum_probs=33.2
Q ss_pred CCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
++.+||-+|+|. |..+..+++. |..+|+++|.+++.++.+++
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~ 210 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK 210 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 788999999964 7777777764 44489999999988887764
No 435
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=36.74 E-value=20 Score=35.29 Aligned_cols=45 Identities=16% Similarity=0.075 Sum_probs=33.7
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhhHHHHh
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKT 478 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~~~~~~ 478 (496)
...+++||++++|.+-.|.+.|.++.. .....+.+..|+..+...
T Consensus 95 ~~~L~~GD~v~ip~g~~H~~~n~~~~~-~~l~v~~p~~~~~~f~~l 139 (350)
T 1juh_A 95 TRVLSSGDYGSVPRNVTHTFQIQDPDT-EMTGVIVPGGFEDLFYYL 139 (350)
T ss_dssp EEEEETTCEEEECTTEEEEEEECSTTE-EEEEEEESSCTTHHHHHH
T ss_pred EEEECCCCEEEECCCCcEEEEeCCCCC-EEEEEEcCccHHHHHHHh
Confidence 467899999999999999999986443 334455566677776553
No 436
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=36.48 E-value=26 Score=33.89 Aligned_cols=42 Identities=14% Similarity=-0.047 Sum_probs=33.5
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhc
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLT 329 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~ 329 (496)
.++++||-+|| |.|..+..+++....+|++++.+++.++.++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~ 197 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLK 197 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35889999997 4677777777654458999999998888775
No 437
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=36.36 E-value=21 Score=34.41 Aligned_cols=45 Identities=16% Similarity=0.134 Sum_probs=33.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCChhhHHHHh
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKT 478 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~~~~~~~~~ 478 (496)
...+++||++++|.+-.|.+.|.+.. ..-..++++..++..+...
T Consensus 258 ~~~l~~GD~~~ip~~~~H~~~n~~~~-~~~l~v~~~~~~~~~~~~~ 302 (337)
T 1y3t_A 258 EIQLNPGDFLHVPANTVHSYRLDSHY-TKMVGVLVPGLFEPFFRTL 302 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSSS-EEEEEEEESSTTTHHHHHH
T ss_pred EEEECCCCEEEECCCCeEEEEECCCC-eEEEEEEcCccHHHHHHHh
Confidence 45689999999999999999998653 2333445666777766653
No 438
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=36.16 E-value=54 Score=26.43 Aligned_cols=68 Identities=13% Similarity=0.109 Sum_probs=40.4
Q ss_pred CCCeEEEecCcCCHHHHHHHH----ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCce
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLM----NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKF 361 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~----~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~f 361 (496)
.+++|+=+|+ |..+..+++ .| .+|+++|.+++.++.++.. ...++.+|..+... .....+
T Consensus 5 ~~~~v~I~G~--G~iG~~~a~~l~~~g-~~v~~~d~~~~~~~~~~~~----------~~~~~~~d~~~~~~l~~~~~~~~ 71 (144)
T 2hmt_A 5 KNKQFAVIGL--GRFGGSIVKELHRMG-HEVLAVDINEEKVNAYASY----------ATHAVIANATEENELLSLGIRNF 71 (144)
T ss_dssp -CCSEEEECC--SHHHHHHHHHHHHTT-CCCEEEESCHHHHHTTTTT----------CSEEEECCTTCHHHHHTTTGGGC
T ss_pred cCCcEEEECC--CHHHHHHHHHHHHCC-CEEEEEeCCHHHHHHHHHh----------CCEEEEeCCCCHHHHHhcCCCCC
Confidence 4567888887 555555543 34 5799999998877654432 12445566543211 112468
Q ss_pred eEEEEccc
Q psy11730 362 DIILTSET 369 (496)
Q Consensus 362 D~Ii~~~~ 369 (496)
|+|+..-.
T Consensus 72 d~vi~~~~ 79 (144)
T 2hmt_A 72 EYVIVAIG 79 (144)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 98887544
No 439
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=36.09 E-value=37 Score=32.84 Aligned_cols=43 Identities=19% Similarity=-0.016 Sum_probs=32.8
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||-+|+ |.|..+..+++....+|+++|.+++..+.+++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~ 212 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS 212 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH
Confidence 35889999998 46777777776444589999998887776653
No 440
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=36.08 E-value=76 Score=28.30 Aligned_cols=79 Identities=18% Similarity=0.164 Sum_probs=48.4
Q ss_pred CCCCeEEEecCcCCHHHHHHHH----ccCCeEEEEeCCHHHHHHhcCcccccccCCCCce-EEEecccC-CccccCCCce
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM----NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKC-KFYHGDWG-SLSAVIHSKF 361 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~----~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v-~~~~~d~~-~~~~~~~~~f 361 (496)
+.+++||=.|+ +|.++..+++ .| .+|++++-+++....... .++ .++.+|+. .+... -+..
T Consensus 19 l~~~~ilVtGa-tG~iG~~l~~~L~~~G-~~V~~~~R~~~~~~~~~~----------~~~~~~~~~Dl~~~~~~~-~~~~ 85 (236)
T 3e8x_A 19 FQGMRVLVVGA-NGKVARYLLSELKNKG-HEPVAMVRNEEQGPELRE----------RGASDIVVANLEEDFSHA-FASI 85 (236)
T ss_dssp --CCEEEEETT-TSHHHHHHHHHHHHTT-CEEEEEESSGGGHHHHHH----------TTCSEEEECCTTSCCGGG-GTTC
T ss_pred cCCCeEEEECC-CChHHHHHHHHHHhCC-CeEEEEECChHHHHHHHh----------CCCceEEEcccHHHHHHH-HcCC
Confidence 56889998885 4656655544 34 589999988776554321 246 77888876 22222 3578
Q ss_pred eEEEEccccccccchHhH
Q psy11730 362 DIILTSETIYSVANYNKL 379 (496)
Q Consensus 362 D~Ii~~~~l~~~~~~~~~ 379 (496)
|+|+.+-......+.+..
T Consensus 86 D~vi~~ag~~~~~~~~~~ 103 (236)
T 3e8x_A 86 DAVVFAAGSGPHTGADKT 103 (236)
T ss_dssp SEEEECCCCCTTSCHHHH
T ss_pred CEEEECCCCCCCCCcccc
Confidence 999987665544444433
No 441
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=35.90 E-value=39 Score=32.59 Aligned_cols=43 Identities=19% Similarity=0.047 Sum_probs=33.8
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||-+|+|. |..+..+++....+|+++|.+++.++.+++
T Consensus 163 ~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (339)
T 1rjw_A 163 KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE 206 (339)
T ss_dssp CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH
Confidence 3588999999964 777777776544699999999998887754
No 442
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=35.89 E-value=14 Score=32.08 Aligned_cols=24 Identities=25% Similarity=0.348 Sum_probs=21.4
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-+|.+.|..
T Consensus 92 ~~~l~~GD~i~ip~g~~H~~~n~~ 115 (166)
T 3jzv_A 92 VSAVAPYDLVTIPGWSWHQFRAPA 115 (166)
T ss_dssp EEEECTTCEEEECTTCCEEEECCT
T ss_pred EEEeCCCCEEEECCCCcEEeEeCC
Confidence 456899999999999999999974
No 443
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=35.54 E-value=24 Score=28.02 Aligned_cols=23 Identities=22% Similarity=0.325 Sum_probs=21.0
Q ss_pred hccCCceeeeCCcceEEEEeeee
Q psy11730 435 VQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 435 ~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
.+.+||++++|.+-.|.+.|.++
T Consensus 69 ~l~~Gd~i~ip~~~~H~~~~~~~ 91 (117)
T 2b8m_A 69 NYKEGNIVYVPFNVKMLIQNINS 91 (117)
T ss_dssp EEETTCEEEECTTCEEEEECCSS
T ss_pred EeCCCCEEEECCCCcEEeEcCCC
Confidence 68999999999999999999854
No 444
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=34.83 E-value=16 Score=31.57 Aligned_cols=25 Identities=28% Similarity=0.335 Sum_probs=21.9
Q ss_pred hhhccCCceeeeCCc--ceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGG--WWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~g--Wwh~v~~l~~ 457 (496)
+..+++||++++|.+ -.|.+.|...
T Consensus 84 ~~~l~~GD~i~ip~~~~~~H~~~n~~~ 110 (163)
T 3i7d_A 84 EHPMVPGDCAAFPAGDPNGHQFVNRTD 110 (163)
T ss_dssp EEEECTTCEEEECTTCCCCBEEECCSS
T ss_pred EEEeCCCCEEEECCCCCcceEEEECCC
Confidence 467899999999999 9999999753
No 445
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=34.67 E-value=33 Score=33.26 Aligned_cols=43 Identities=21% Similarity=0.216 Sum_probs=32.8
Q ss_pred CCCCeEEEecCc--CCHHHHHHHHcc-CCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCG--AGLLGLYTLMNG-AAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcG--tG~~~~~la~~~-~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||-+|+| .|..+..+++.. ..+|+++|.+++.++.+++
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~ 214 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR 214 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 358899999998 466666666654 4589999999988887653
No 446
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=34.47 E-value=26 Score=34.30 Aligned_cols=42 Identities=19% Similarity=0.162 Sum_probs=35.0
Q ss_pred CCCeEEEec-CcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVG-CGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlG-cGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~ 330 (496)
++.+||=+| +|. |.++..+|+. +..+|+++|.+++-++.+++
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~~ 215 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVKS 215 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 477899998 554 9999999986 67899999999998888764
No 447
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=34.43 E-value=17 Score=35.94 Aligned_cols=24 Identities=21% Similarity=0.306 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.+.||...|..
T Consensus 140 ~~~l~~GD~~~iP~g~~H~~~n~~ 163 (354)
T 2d40_A 140 RTPMNEGDFILTPQWRWHDHGNPG 163 (354)
T ss_dssp EEECCTTCEEEECTTSCEEEECCS
T ss_pred EEEEcCCCEEEECCCCcEEeEeCC
Confidence 456899999999999999999984
No 448
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=34.38 E-value=28 Score=30.59 Aligned_cols=23 Identities=22% Similarity=0.209 Sum_probs=21.2
Q ss_pred hhhccCCceeeeCCcceEEEEee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNL 455 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l 455 (496)
...+++||.+++|.+-.|.+.|.
T Consensus 163 ~~~l~~GD~~~~~~~~~H~~~n~ 185 (198)
T 2bnm_A 163 EALLPTGASMFVEEHVPHAFTAA 185 (198)
T ss_dssp EEEECTTCEEEECTTCCEEEEES
T ss_pred cEEECCCCEEEeCCCCceEEEec
Confidence 46789999999999999999998
No 449
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=34.12 E-value=37 Score=33.80 Aligned_cols=44 Identities=20% Similarity=0.180 Sum_probs=34.4
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHc-cCCeEEEEeCCHHHHHHhcCc
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMN-GAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~-~~~~v~giD~s~~~i~~a~~~ 331 (496)
.+|.+||=+|+|. |..+..+|+. |...|+++|.+++-++.+++.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~~l 257 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLAKEL 257 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 3588999999875 7777777764 445999999999988887643
No 450
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=33.88 E-value=18 Score=35.84 Aligned_cols=25 Identities=24% Similarity=0.293 Sum_probs=22.1
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+++||++++|.+.+|.+.|.+.
T Consensus 302 ~~~l~~GD~~~ip~~~~H~~~n~~~ 326 (385)
T 1j58_A 302 TFNYQAGDVGYVPFAMGHYVENIGD 326 (385)
T ss_dssp EEEEESSCEEEECTTCBEEEEECSS
T ss_pred EEEEcCCCEEEECCCCeEEEEECCC
Confidence 4678999999999999999999853
No 451
>1nxm_A DTDP-6-deoxy-D-XYLO-4-hexulose 3,5-epimerase; jelly roll-like structure, beta sheet, isomerase; 1.30A {Streptococcus suis} SCOP: b.82.1.1 PDB: 1nyw_A* 1nzc_A* 2ixl_A*
Probab=33.81 E-value=30 Score=31.09 Aligned_cols=26 Identities=23% Similarity=0.289 Sum_probs=21.2
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
.+.+..+..||||.|.||-..++++.
T Consensus 110 ~v~Ls~~~~L~IP~G~aHgf~~lsd~ 135 (197)
T 1nxm_A 110 QTVIDASKSIFVPRGVANGFQVLSDF 135 (197)
T ss_dssp EEEECTTEEEEECTTEEEEEEECSSE
T ss_pred EEEeCCCcEEEeCCCeEEEEEeccCC
Confidence 44555588899999999999999655
No 452
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=33.73 E-value=28 Score=36.14 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=24.0
Q ss_pred CchhhhccCCceeeeCCcceEEEEeeeeeE
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLDTTV 459 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i 459 (496)
+.+...+.+||+++||.|+.|.+.|.+..+
T Consensus 415 ~~~~~~l~~GDv~viP~G~~H~~~Ng~e~l 444 (510)
T 3c3v_A 415 RVYDEELQEGHVLVVPQNFAVAGKSQSDNF 444 (510)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEECSSEE
T ss_pred EEEeEEEcCCcEEEECCCCeEEEEeCCCCE
Confidence 345566999999999999999999954433
No 453
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=33.69 E-value=57 Score=31.33 Aligned_cols=45 Identities=20% Similarity=0.047 Sum_probs=33.9
Q ss_pred CCCCCeEEEecCcC-CHHHHHHHH-ccCCeEEEEeCCHHHHHHhcCc
Q psy11730 287 AVDKLSVLDVGCGA-GLLGLYTLM-NGAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 287 ~~~~~~VLDlGcGt-G~~~~~la~-~~~~~v~giD~s~~~i~~a~~~ 331 (496)
..++.+||=+|+|. |.++..+++ .+..+|+++|.+++-++.+++.
T Consensus 161 ~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~~~ 207 (348)
T 4eez_A 161 VKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKI 207 (348)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhhhhc
Confidence 34688999999986 445555554 5678999999999988776653
No 454
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=33.50 E-value=21 Score=34.64 Aligned_cols=43 Identities=19% Similarity=0.013 Sum_probs=34.1
Q ss_pred CCCCeEEEecCc--CCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCG--AGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcG--tG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||-+|+| .|..+..+++....+|+++|.+++.++.+++
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 187 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR 187 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 358899999987 5888888777555689999999887777664
No 455
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=33.40 E-value=12 Score=34.97 Aligned_cols=34 Identities=26% Similarity=0.477 Sum_probs=26.0
Q ss_pred CCCeEEEecCcC-C-HHHHHHHHccCCeEEEEeCCH
Q psy11730 289 DKLSVLDVGCGA-G-LLGLYTLMNGAAHVSFQDYNQ 322 (496)
Q Consensus 289 ~~~~VLDlGcGt-G-~~~~~la~~~~~~v~giD~s~ 322 (496)
.+++||=+|||. | ..+..|+..|.++++.+|.+.
T Consensus 30 ~~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 30 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred hCCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 467999999984 3 344556678889999999875
No 456
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=33.27 E-value=18 Score=33.43 Aligned_cols=25 Identities=16% Similarity=0.028 Sum_probs=22.0
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
...+.+||.+++|.+-.|.+.|..+
T Consensus 185 ~~~l~~Gd~i~ip~~~~H~~~n~~~ 209 (243)
T 3h7j_A 185 TVEMKFGTAYFCEPREDHGAINRSE 209 (243)
T ss_dssp EEEECTTCEEEECTTCCEEEEECSS
T ss_pred EEEECCCCEEEECCCCcEEeEeCCC
Confidence 4568999999999999999999843
No 457
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=33.25 E-value=36 Score=33.21 Aligned_cols=43 Identities=23% Similarity=0.155 Sum_probs=32.9
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHcc-CCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNG-AAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~-~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||=+|+|. |.++..+|+.. ..+|+++|.+++-++.+++
T Consensus 185 ~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~~ 229 (359)
T 1h2b_A 185 YPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER 229 (359)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHH
Confidence 3588999999864 66666666654 4589999999998887764
No 458
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=32.80 E-value=19 Score=36.08 Aligned_cols=24 Identities=25% Similarity=0.426 Sum_probs=21.5
Q ss_pred hhhccCCceeeeCCcceEEEEe-ee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLN-LD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~-l~ 456 (496)
.+..++||++++|.|.||.+.| .+
T Consensus 163 ~~~~~~GD~i~~P~g~~H~~~N~~g 187 (394)
T 3bu7_A 163 KVELGANDFVLTPNGTWHEHGILES 187 (394)
T ss_dssp EEEECTTCEEEECTTCCEEEEECTT
T ss_pred EEEEcCCCEEEECcCCCEEEEcCCC
Confidence 4678999999999999999999 63
No 459
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=32.68 E-value=35 Score=35.27 Aligned_cols=31 Identities=10% Similarity=0.078 Sum_probs=24.7
Q ss_pred CchhhhccCCceeeeCCcceEEEEeeeeeEE
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLDTTVA 460 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~ 460 (496)
+.+...+.+||+++||.|..|.+.|.+..+.
T Consensus 410 ~~~~~~l~~GDv~vvP~G~~H~~~n~~e~~~ 440 (493)
T 2d5f_A 410 AVFDGELRRGQLLVVPQNFVVAEQGGEQGLE 440 (493)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEEEEEEE
T ss_pred EEEeEEEcCCCEEEECCCCeEeeeeCCCCEE
Confidence 3345669999999999999999998764443
No 460
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=32.45 E-value=70 Score=30.66 Aligned_cols=45 Identities=24% Similarity=0.338 Sum_probs=34.4
Q ss_pred CCCCCeEEEecCcC-CHHHHHHHH-ccCCeEEEEeCCHHHHHHhcCc
Q psy11730 287 AVDKLSVLDVGCGA-GLLGLYTLM-NGAAHVSFQDYNQEVIESLTLP 331 (496)
Q Consensus 287 ~~~~~~VLDlGcGt-G~~~~~la~-~~~~~v~giD~s~~~i~~a~~~ 331 (496)
..++.+||=.|+|. |.++..+++ .|...++++|.+++-++.+++.
T Consensus 158 ~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~~l 204 (346)
T 4a2c_A 158 GCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALAKSF 204 (346)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT
T ss_pred cCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHHHHc
Confidence 35688999999875 666666665 4557789999999988887653
No 461
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=32.40 E-value=18 Score=29.87 Aligned_cols=24 Identities=21% Similarity=0.320 Sum_probs=21.4
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|..
T Consensus 97 ~~~l~~Gd~i~i~~~~~H~~~n~~ 120 (133)
T 1o4t_A 97 DVPIKAGDVCFTDSGESHSIENTG 120 (133)
T ss_dssp EEEEETTEEEEECTTCEEEEECCS
T ss_pred EEEeCCCcEEEECCCCcEEeEECC
Confidence 456899999999999999999974
No 462
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=31.85 E-value=44 Score=29.80 Aligned_cols=64 Identities=20% Similarity=0.209 Sum_probs=38.7
Q ss_pred EEEecCcCCHHHHHHHHc---cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeEEEE
Q psy11730 293 VLDVGCGAGLLGLYTLMN---GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDIILT 366 (496)
Q Consensus 293 VLDlGcGtG~~~~~la~~---~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~Ii~ 366 (496)
|+=+|+ |..+..+++. ....|+.+|.+++.++..... ..+.++.+|..+... ..-..+|+|++
T Consensus 3 iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 3 VIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---------LKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp EEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---------SSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---------cCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 444554 6666666542 235799999999988764321 134567777665321 11346788776
Q ss_pred c
Q psy11730 367 S 367 (496)
Q Consensus 367 ~ 367 (496)
.
T Consensus 72 ~ 72 (218)
T 3l4b_C 72 L 72 (218)
T ss_dssp C
T ss_pred e
Confidence 4
No 463
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=31.83 E-value=48 Score=31.55 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=31.8
Q ss_pred eEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 292 SVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 292 ~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
+||=+|+ |.|..+..+++....+|++++.+++-.+.+++
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~~ 189 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLKS 189 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHHH
T ss_pred eEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 4999997 45888888887655699999999988887764
No 464
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=31.81 E-value=20 Score=36.20 Aligned_cols=24 Identities=21% Similarity=0.291 Sum_probs=21.6
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.|..|.+.|.+
T Consensus 92 ~~~l~~GDv~~iP~G~~H~~~N~g 115 (416)
T 1uij_A 92 SYNLHPGDAQRIPAGTTYYLVNPH 115 (416)
T ss_dssp EEEECTTEEEEECTTCEEEEEECC
T ss_pred EEEecCCCEEEECCCCeEEEEecC
Confidence 456899999999999999999983
No 465
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=31.53 E-value=23 Score=33.63 Aligned_cols=42 Identities=12% Similarity=-0.073 Sum_probs=33.0
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhc
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLT 329 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~ 329 (496)
.++++||-+|+ |.|..+..+++....+|++++.+++.++.++
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~ 167 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL 167 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 35889999998 4588888877755568999999988777664
No 466
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=31.52 E-value=20 Score=30.64 Aligned_cols=25 Identities=28% Similarity=0.086 Sum_probs=22.5
Q ss_pred hhhhccCCceeeeCCcceEEEEeee
Q psy11730 432 LELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 432 ~e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
-...+.+||++++|.+-.|.+.|.+
T Consensus 88 ~~~~l~~Gd~i~ip~~~~H~~~n~~ 112 (163)
T 1lr5_A 88 QEIPFFQNTTFSIPVNDPHQVWNSD 112 (163)
T ss_dssp EEEEECTTEEEEECTTCCEEEECCC
T ss_pred EEEEeCCCCEEEECCCCcEEeEeCC
Confidence 4567899999999999999999986
No 467
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=31.16 E-value=19 Score=29.97 Aligned_cols=34 Identities=15% Similarity=0.328 Sum_probs=27.1
Q ss_pred hhhhccCCceeeeCCcceEEEEeeeeeEEEeecc
Q psy11730 432 LELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNF 465 (496)
Q Consensus 432 ~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~ 465 (496)
.+++..+|+..+||.+-||.|.-+++.+.+..+|
T Consensus 65 ~~~l~~~~~~~~i~Pq~wH~Ve~lsdd~~f~leF 98 (127)
T 3bb6_A 65 QVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDF 98 (127)
T ss_dssp EEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEE
T ss_pred EEEEeCCCCceEECCCCcEEEEEcCCCEEEEEEE
Confidence 3456788999999999999999986666665555
No 468
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=31.00 E-value=37 Score=33.50 Aligned_cols=26 Identities=23% Similarity=0.337 Sum_probs=22.6
Q ss_pred hhhccCCceeeeCCcceEEEEeeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTT 458 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~ 458 (496)
...+++||++++|.+.+|.+.|.+..
T Consensus 123 ~~~l~~GD~~~ip~g~~H~~~n~~~~ 148 (385)
T 1j58_A 123 IDDVGEGDLWYFPSGLPHSIQALEEG 148 (385)
T ss_dssp EEEEETTEEEEECTTCCEEEEEEEEE
T ss_pred EEEeCCCCEEEECCCCeEEEEECCCC
Confidence 34789999999999999999998654
No 469
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=30.67 E-value=60 Score=31.80 Aligned_cols=33 Identities=21% Similarity=0.486 Sum_probs=26.1
Q ss_pred CCCeEEEecCcC-C-HHHHHHHHccCCeEEEEeCC
Q psy11730 289 DKLSVLDVGCGA-G-LLGLYTLMNGAAHVSFQDYN 321 (496)
Q Consensus 289 ~~~~VLDlGcGt-G-~~~~~la~~~~~~v~giD~s 321 (496)
.+++||=+|||. | ..+..|+..|.++++.+|..
T Consensus 117 ~~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D 151 (353)
T 3h5n_A 117 KNAKVVILGCGGIGNHVSVILATSGIGEIILIDND 151 (353)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECC
T ss_pred hCCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCC
Confidence 578999999984 3 35556678899999999965
No 470
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=30.52 E-value=28 Score=35.84 Aligned_cols=43 Identities=9% Similarity=0.032 Sum_probs=0.0
Q ss_pred CCCchhhhccCCceeeeCCcceEEEEeeeeeEEEeecccCCCC
Q psy11730 428 EWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTN 470 (496)
Q Consensus 428 ~~~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~~~~~~~ 470 (496)
+.+.+...+.+||+++||.|+.|.+.|-+..+.+..-+.+...
T Consensus 379 G~~~~~~~l~~GDv~viP~G~~H~~~ng~~~l~~l~f~~s~~p 421 (476)
T 1fxz_A 379 GERVFDGELQEGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTP 421 (476)
T ss_dssp SCEEEEEEEETTCEEEECTTCEEEEEECSTTEEEEEEESSSSC
T ss_pred CCEEeeeEEcCCCEEEECCCCeEEEEeCCCCEEEEEEECCCCC
No 471
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Probab=30.42 E-value=1.9e+02 Score=25.97 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=50.7
Q ss_pred CCCCeEEEecCcCCHHHHHHHH----ccCCeEEEEeCCH--HHHHHhcCcccccccCCCCceEEEecccCCc-ccc----
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM----NGAAHVSFQDYNQ--EVIESLTLPNILMNTDNLEKCKFYHGDWGSL-SAV---- 356 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~----~~~~~v~giD~s~--~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~-~~~---- 356 (496)
+++++||=.|+ +|.++..+++ .|...|+.++-++ +.++..... ....++.++.+|+.+. ...
T Consensus 3 l~~k~vlVtGa-s~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~------~~~~~~~~~~~D~~~~~~~~~~~~ 75 (254)
T 1sby_A 3 LTNKNVIFVAA-LGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAI------NPKVNITFHTYDVTVPVAESKKLL 75 (254)
T ss_dssp CTTCEEEEETT-TSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHH------CTTSEEEEEECCTTSCHHHHHHHH
T ss_pred CCCcEEEEECC-CChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHh------CCCceEEEEEEecCCChHHHHHHH
Confidence 46788888886 4666666554 5554588888765 333322211 0134678888888764 211
Q ss_pred -----CCCceeEEEEccccccccchHhHh
Q psy11730 357 -----IHSKFDIILTSETIYSVANYNKLL 380 (496)
Q Consensus 357 -----~~~~fD~Ii~~~~l~~~~~~~~~~ 380 (496)
..+..|+++.+-.+....+++..+
T Consensus 76 ~~~~~~~g~id~lv~~Ag~~~~~~~~~~~ 104 (254)
T 1sby_A 76 KKIFDQLKTVDILINGAGILDDHQIERTI 104 (254)
T ss_dssp HHHHHHHSCCCEEEECCCCCCTTCHHHHH
T ss_pred HHHHHhcCCCCEEEECCccCCHHHHhhhh
Confidence 013689999876654445555544
No 472
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=30.33 E-value=36 Score=33.48 Aligned_cols=25 Identities=8% Similarity=-0.039 Sum_probs=21.4
Q ss_pred hhhccCCceeeeCCcceEEEEeeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
.+..++||+++||.+.||.+.|.++
T Consensus 307 ~~~~~~GD~~~vP~~~~H~~~n~e~ 331 (354)
T 2d40_A 307 TFSFSAKDIFVVPTWHGVSFQTTQD 331 (354)
T ss_dssp EEEEETTCEEEECTTCCEEEEEEEE
T ss_pred EEEEcCCCEEEECCCCeEEEEeCCC
Confidence 3568999999999999999999644
No 473
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=30.32 E-value=30 Score=35.13 Aligned_cols=33 Identities=24% Similarity=0.309 Sum_probs=25.5
Q ss_pred CCCeEEEecCcC--CHHHHHHHHccCCeEEEEeCC
Q psy11730 289 DKLSVLDVGCGA--GLLGLYTLMNGAAHVSFQDYN 321 (496)
Q Consensus 289 ~~~~VLDlGcGt--G~~~~~la~~~~~~v~giD~s 321 (496)
.+.+||=||||. ...+..|+..|.++++.+|..
T Consensus 39 ~~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D 73 (434)
T 1tt5_B 39 DTCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMD 73 (434)
T ss_dssp HTCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECC
T ss_pred cCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 457899999985 345566678899999999854
No 474
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=29.92 E-value=26 Score=34.34 Aligned_cols=34 Identities=21% Similarity=0.289 Sum_probs=25.8
Q ss_pred CCCCeEEEecCcC-C-HHHHHHHHccCCeEEEEeCC
Q psy11730 288 VDKLSVLDVGCGA-G-LLGLYTLMNGAAHVSFQDYN 321 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G-~~~~~la~~~~~~v~giD~s 321 (496)
+.+.+||=+|||. | ..+..|+..|.++++.+|..
T Consensus 34 L~~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d 69 (346)
T 1y8q_A 34 LRASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHE 69 (346)
T ss_dssp HHTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred HhCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECC
Confidence 3578999999974 3 44555677899999999864
No 475
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=29.74 E-value=1e+02 Score=30.38 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=51.6
Q ss_pred CCCeEEEecCcCCHHHHHHHH----ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc----CCCc
Q psy11730 289 DKLSVLDVGCGAGLLGLYTLM----NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV----IHSK 360 (496)
Q Consensus 289 ~~~~VLDlGcGtG~~~~~la~----~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~~ 360 (496)
++++||=.|+ +|.+|..+++ .|+..|++++-++..+................++.++.+|+.+.... ....
T Consensus 34 ~~k~vLVTGa-tG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLGG-AGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEETT-TSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEcC-ChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 4678888885 4666665544 55578999999987765433221111111135788899998765321 1357
Q ss_pred eeEEEEccccccc
Q psy11730 361 FDIILTSETIYSV 373 (496)
Q Consensus 361 fD~Ii~~~~l~~~ 373 (496)
+|+|+......+.
T Consensus 113 ~D~Vih~Aa~~~~ 125 (399)
T 3nzo_A 113 YDYVLNLSALKHV 125 (399)
T ss_dssp CSEEEECCCCCCG
T ss_pred CCEEEECCCcCCC
Confidence 8999976555443
No 476
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=29.50 E-value=37 Score=33.09 Aligned_cols=41 Identities=20% Similarity=0.154 Sum_probs=32.1
Q ss_pred CCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhc
Q psy11730 289 DKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLT 329 (496)
Q Consensus 289 ~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~ 329 (496)
++.+||=+|+|. |..+..+++....+|++++.+++.++.++
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~ 221 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEAL 221 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH
Confidence 688999999864 67777777654458999999988877765
No 477
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=29.39 E-value=25 Score=33.60 Aligned_cols=42 Identities=24% Similarity=0.097 Sum_probs=33.4
Q ss_pred CCCCeEEEecCcC-CHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGCGA-GLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGcGt-G~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++.+||=+|+|. |.++..+++....+|++++ +++-.+.+++
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~~ 183 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALAAK 183 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHHH
Confidence 3588999999964 8888888875555999999 8887777764
No 478
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=28.82 E-value=41 Score=34.72 Aligned_cols=31 Identities=13% Similarity=0.165 Sum_probs=24.8
Q ss_pred CchhhhccCCceeeeCCcceEEEEeeeeeEE
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLDTTVA 460 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~ 460 (496)
+.+...+.+||+.+||.|+.|...+.+..+.
T Consensus 401 ~~f~~~l~~GDV~v~P~G~~H~~~a~~e~~~ 431 (496)
T 3ksc_A 401 TVFDGELEAGRALTVPQNYAVAAKSLSDRFS 431 (496)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEECSSEEE
T ss_pred EEEEEEecCCeEEEECCCCEEEEEeCCCCEE
Confidence 4456678999999999999999888754433
No 479
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=28.73 E-value=40 Score=35.07 Aligned_cols=32 Identities=13% Similarity=0.050 Sum_probs=24.5
Q ss_pred CchhhhccCCceeeeCCcceEEEEeeeeeEEE
Q psy11730 430 KPLELVQGPGETVFVPGGWWHVVLNLDTTVAV 461 (496)
Q Consensus 430 ~p~e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v 461 (496)
+.+...+.+||+++||.|+.|...+.+..+.+
T Consensus 437 ~v~~~~L~~GDV~v~P~G~~H~~~ag~e~l~f 468 (531)
T 3fz3_A 437 AILDQEVQQGQLFIVPQNHGVIQQAGNQGFEY 468 (531)
T ss_dssp EEEEEEEETTCEEEECTTCEEEEEEEEEEEEE
T ss_pred EEEEEEecCCeEEEECCCCeEEEecCCCCEEE
Confidence 44567899999999999999987765444443
No 480
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=28.66 E-value=47 Score=31.39 Aligned_cols=52 Identities=25% Similarity=0.325 Sum_probs=39.9
Q ss_pred ecc-hHHHHHHHHhCCCCCCCeEEEecCcCCHHHHHHHHccCCeEEEEeCCHHHHHH
Q psy11730 272 WEC-TFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIES 327 (496)
Q Consensus 272 ~~~-~~~l~~~l~~~~~~~~~~VLDlGcGtG~~~~~la~~~~~~v~giD~s~~~i~~ 327 (496)
|.. -..|+.+|...++. ..+.+|.-||+|..++.+. +..++..|++++.+..
T Consensus 10 y~GgK~~l~~~i~~~~p~-~~~yvEpF~Ggg~V~~~~~---~~~~i~ND~n~~lin~ 62 (278)
T 2g1p_A 10 WAGGKYPLLDDIKRHLPK-GECLVEPFVGAGSVFLNTD---FSRYILADINSDLISL 62 (278)
T ss_dssp CTTCCGGGHHHHHHHCCC-CSEEEETTCTTCHHHHTCC---CSEEEEEESCHHHHHH
T ss_pred ccchHHHHHHHHHHhccc-cCeEEeeccCccHHHHhhc---ccceEEEeccHHHHHH
Confidence 444 34678888877653 6799999999999977642 4689999999998743
No 481
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=28.57 E-value=48 Score=33.86 Aligned_cols=64 Identities=14% Similarity=0.165 Sum_probs=42.3
Q ss_pred eEEEecCcCCHHHHHHHHccC---CeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeEEE
Q psy11730 292 SVLDVGCGAGLLGLYTLMNGA---AHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDIIL 365 (496)
Q Consensus 292 ~VLDlGcGtG~~~~~la~~~~---~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~Ii 365 (496)
+|+= ||.|..|..+|+... ..|+.||.+++.++.+..+. .+..+.+|..+... ..-...|+++
T Consensus 5 ~iiI--~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~---------~~~~i~Gd~~~~~~L~~Agi~~ad~~i 73 (461)
T 4g65_A 5 KIII--LGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY---------DLRVVNGHASHPDVLHEAGAQDADMLV 73 (461)
T ss_dssp EEEE--ECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS---------SCEEEESCTTCHHHHHHHTTTTCSEEE
T ss_pred EEEE--ECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc---------CcEEEEEcCCCHHHHHhcCCCcCCEEE
Confidence 4444 455677777776432 46999999999998765332 35668888775432 1235788887
Q ss_pred E
Q psy11730 366 T 366 (496)
Q Consensus 366 ~ 366 (496)
+
T Consensus 74 a 74 (461)
T 4g65_A 74 A 74 (461)
T ss_dssp E
T ss_pred E
Confidence 6
No 482
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=28.38 E-value=76 Score=29.47 Aligned_cols=77 Identities=13% Similarity=0.128 Sum_probs=52.1
Q ss_pred CCCCCeEEEecCcCCH---HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC------
Q psy11730 287 AVDKLSVLDVGCGAGL---LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI------ 357 (496)
Q Consensus 287 ~~~~~~VLDlGcGtG~---~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~------ 357 (496)
.++|+.+|=-|.+.|. .+..|++.|. +|+.+|.+++.++.+.+.... ...++.++.+|+.+.....
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~----~g~~~~~~~~Dvt~~~~v~~~~~~~ 78 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRG----MGKEVLGVKADVSKKKDVEEFVRRT 78 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHH----TTCCEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHh----cCCcEEEEEccCCCHHHHHHHHHHH
Confidence 4688999999987775 3444455564 799999999887765544321 2357888888887654321
Q ss_pred ---CCceeEEEEcc
Q psy11730 358 ---HSKFDIILTSE 368 (496)
Q Consensus 358 ---~~~fD~Ii~~~ 368 (496)
-+..|+++.+-
T Consensus 79 ~~~~G~iDiLVNNA 92 (254)
T 4fn4_A 79 FETYSRIDVLCNNA 92 (254)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 24789988754
No 483
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=28.20 E-value=33 Score=27.54 Aligned_cols=24 Identities=21% Similarity=0.332 Sum_probs=21.2
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+++||++++|.+-.|.+.|.+
T Consensus 73 ~~~l~~Gd~~~i~~~~~H~~~~~~ 96 (128)
T 4i4a_A 73 DFPVTKGDLIIIPLDSEHHVINNN 96 (128)
T ss_dssp EEEEETTCEEEECTTCCEEEEECS
T ss_pred EEEECCCcEEEECCCCcEEeEeCC
Confidence 456899999999999999999973
No 484
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=27.91 E-value=33 Score=31.21 Aligned_cols=31 Identities=6% Similarity=-0.018 Sum_probs=25.7
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQ 463 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~ 463 (496)
+..+.+||.+++|++-.|.+.+.+++.-+..
T Consensus 76 ~~~l~~Gd~~~~p~~~~H~~~a~~~~~~l~i 106 (227)
T 3rns_A 76 KKTISNGDFLEITANHNYSIEARDNLKLIEI 106 (227)
T ss_dssp EEEEETTEEEEECSSCCEEEEESSSEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEECCCcEEEEE
Confidence 3568999999999999999999987655433
No 485
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=27.55 E-value=24 Score=30.92 Aligned_cols=32 Identities=19% Similarity=0.210 Sum_probs=25.0
Q ss_pred hhhccCCceeeeCCcceEEEEeeeeeEEEeec
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAVTQN 464 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~~~i~v~~~ 464 (496)
+..+.+|++.+.|.+..|.|.|..+..+|+..
T Consensus 118 ~~~l~~G~~~~~~~~~iH~V~N~~~~~aVSlH 149 (171)
T 3eqe_A 118 SYFVHEGECLISTKGLIHKMSNPTSERMVSLH 149 (171)
T ss_dssp EEEEETTCEEEECTTCEEEEECCSSSCEEEEE
T ss_pred eEEeCCCcEEEeCCCCEEEEECCCCCCEEEEE
Confidence 45678999999999999999998544444443
No 486
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=27.34 E-value=51 Score=31.99 Aligned_cols=42 Identities=19% Similarity=0.030 Sum_probs=32.8
Q ss_pred CCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 289 DKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 289 ~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
++++||-.|+ |.|..+..+++....+|++++.+++.++.+++
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 213 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ 213 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHHH
Confidence 5889999997 45777777776555689999999988876653
No 487
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=27.22 E-value=19 Score=29.22 Aligned_cols=24 Identities=25% Similarity=0.071 Sum_probs=21.4
Q ss_pred hhhccCCceeeeCCcceEEEEeee
Q psy11730 433 ELVQGPGETVFVPGGWWHVVLNLD 456 (496)
Q Consensus 433 e~~~~~Ge~l~iP~gWwh~v~~l~ 456 (496)
...+.+||++++|.+-.|.+.|..
T Consensus 87 ~~~l~~Gd~i~ip~g~~H~~~~~~ 110 (126)
T 1vj2_A 87 EETVEEGFYIFVEPNEIHGFRNDT 110 (126)
T ss_dssp EEEEETTEEEEECTTCCEEEECCS
T ss_pred EEEECCCCEEEECCCCcEEeEeCC
Confidence 356899999999999999999975
No 488
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=27.10 E-value=88 Score=29.52 Aligned_cols=89 Identities=12% Similarity=0.075 Sum_probs=48.9
Q ss_pred HHHHHhC-CCCCCCeEEEecCcCC--HHHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc
Q psy11730 279 LNFIKDN-VAVDKLSVLDVGCGAG--LLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA 355 (496)
Q Consensus 279 ~~~l~~~-~~~~~~~VLDlGcGtG--~~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~ 355 (496)
..-|.+. ..+.+++||=+|+|.- ..+..|++.|..+|+.++-+.+-.+...+..... ...+.+...+++++..
T Consensus 115 ~~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~----~~~~~i~~~~~~~l~~ 190 (283)
T 3jyo_A 115 GRGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA----VGREAVVGVDARGIED 190 (283)
T ss_dssp HHHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHH----HTSCCEEEECSTTHHH
T ss_pred HHHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhh----cCCceEEEcCHHHHHH
Confidence 3334333 3578999999999721 1233445677778999998887655433221110 0112223333333322
Q ss_pred cCCCceeEEEEcccccc
Q psy11730 356 VIHSKFDIILTSETIYS 372 (496)
Q Consensus 356 ~~~~~fD~Ii~~~~l~~ 372 (496)
. -..+|+|+..-++-.
T Consensus 191 ~-l~~~DiVInaTp~Gm 206 (283)
T 3jyo_A 191 V-IAAADGVVNATPMGM 206 (283)
T ss_dssp H-HHHSSEEEECSSTTS
T ss_pred H-HhcCCEEEECCCCCC
Confidence 1 246899998666543
No 489
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=27.07 E-value=30 Score=30.27 Aligned_cols=24 Identities=13% Similarity=-0.079 Sum_probs=21.5
Q ss_pred hhccCCceeeeCCcceEEEEeeee
Q psy11730 434 LVQGPGETVFVPGGWWHVVLNLDT 457 (496)
Q Consensus 434 ~~~~~Ge~l~iP~gWwh~v~~l~~ 457 (496)
..+.+||.+++|.+--|.+.|.++
T Consensus 146 ~~l~~GD~i~i~~~~~H~~~n~~~ 169 (192)
T 1y9q_A 146 HELQQGEHIRFFSDQPHGYAAVTE 169 (192)
T ss_dssp EEECTTCEEEEECSSSEEEEESSS
T ss_pred EEeCCCCEEEEcCCCCeEeECCCC
Confidence 468999999999999999999854
No 490
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=26.62 E-value=58 Score=31.74 Aligned_cols=43 Identities=19% Similarity=0.098 Sum_probs=34.3
Q ss_pred CCCCeEEEec--CcCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVG--CGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlG--cGtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||=+| .|.|..+..+++....+|++++.+++.++.+++
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~ 206 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS 206 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH
Confidence 3588999999 356888888887655589999999988877664
No 491
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=26.38 E-value=2.8e+02 Score=26.04 Aligned_cols=81 Identities=17% Similarity=0.114 Sum_probs=48.6
Q ss_pred HHHHHHHHh-CCCCCCCeEEEecCcCCH--HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCC
Q psy11730 276 FDLLNFIKD-NVAVDKLSVLDVGCGAGL--LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352 (496)
Q Consensus 276 ~~l~~~l~~-~~~~~~~~VLDlGcGtG~--~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~ 352 (496)
.-+...|.. ...+.+++||=||+|.-. ....|++.|..+|+.++-+.+-.+...... . ..++++
T Consensus 107 ~G~~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~-----------~--~~~~~~ 173 (282)
T 3fbt_A 107 IGFGKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEF-----------K--VISYDE 173 (282)
T ss_dssp HHHHHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTS-----------E--EEEHHH
T ss_pred HHHHHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhc-----------C--cccHHH
Confidence 334455554 345779999999998432 233445677778999998887665443321 1 112223
Q ss_pred ccccCCCceeEEEEcccccc
Q psy11730 353 LSAVIHSKFDIILTSETIYS 372 (496)
Q Consensus 353 ~~~~~~~~fD~Ii~~~~l~~ 372 (496)
+.. - .+|+||..-++-.
T Consensus 174 l~~--l-~~DivInaTp~Gm 190 (282)
T 3fbt_A 174 LSN--L-KGDVIINCTPKGM 190 (282)
T ss_dssp HTT--C-CCSEEEECSSTTS
T ss_pred HHh--c-cCCEEEECCccCc
Confidence 222 2 6899998665543
No 492
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=26.37 E-value=1.2e+02 Score=27.76 Aligned_cols=66 Identities=12% Similarity=-0.039 Sum_probs=46.3
Q ss_pred CeEEEecCcCCHHHHHHHHcc---CCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEEEEc
Q psy11730 291 LSVLDVGCGAGLLGLYTLMNG---AAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTS 367 (496)
Q Consensus 291 ~~VLDlGcGtG~~~~~la~~~---~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~Ii~~ 367 (496)
++||=.|| |.++..+++.. ..+|++++-++....... ..+++++.+|+.++. ...+|+|+..
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~----------~~~~~~~~~D~~d~~---~~~~d~vi~~ 70 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR----------ASGAEPLLWPGEEPS---LDGVTHLLIS 70 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH----------HTTEEEEESSSSCCC---CTTCCEEEEC
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh----------hCCCeEEEecccccc---cCCCCEEEEC
Confidence 57999994 88888877532 357999998876544322 135788899988855 4678999875
Q ss_pred cccc
Q psy11730 368 ETIY 371 (496)
Q Consensus 368 ~~l~ 371 (496)
-...
T Consensus 71 a~~~ 74 (286)
T 3ius_A 71 TAPD 74 (286)
T ss_dssp CCCB
T ss_pred CCcc
Confidence 5443
No 493
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=26.21 E-value=1.1e+02 Score=27.90 Aligned_cols=80 Identities=20% Similarity=0.232 Sum_probs=51.4
Q ss_pred CCCCeEEEecC-cCCH---HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccC------
Q psy11730 288 VDKLSVLDVGC-GAGL---LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVI------ 357 (496)
Q Consensus 288 ~~~~~VLDlGc-GtG~---~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~------ 357 (496)
+++++||=.|+ |.|. ++..|++.| .+|+.++.+.+.++.+.+.... ....++.++.+|+.+.....
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G-~~V~~~~r~~~~~~~~~~~l~~---~~~~~~~~~~~Dl~~~~~v~~~~~~~ 95 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEG-ADVVISDYHERRLGETRDQLAD---LGLGRVEAVVCDVTSTEAVDALITQT 95 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHT---TCSSCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCC-CEEEEecCCHHHHHHHHHHHHh---cCCCceEEEEeCCCCHHHHHHHHHHH
Confidence 56888998887 5554 444455565 4699999998776654433211 12357889999987653210
Q ss_pred ---CCceeEEEEccccc
Q psy11730 358 ---HSKFDIILTSETIY 371 (496)
Q Consensus 358 ---~~~fD~Ii~~~~l~ 371 (496)
.+..|+++.+-.+.
T Consensus 96 ~~~~g~id~li~~Ag~~ 112 (266)
T 3o38_A 96 VEKAGRLDVLVNNAGLG 112 (266)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHHhCCCcEEEECCCcC
Confidence 13689999865543
No 494
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.14 E-value=1.1e+02 Score=28.58 Aligned_cols=75 Identities=12% Similarity=0.152 Sum_probs=50.5
Q ss_pred CCCCeEEEecCcCCH---HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--------
Q psy11730 288 VDKLSVLDVGCGAGL---LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV-------- 356 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~---~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-------- 356 (496)
++|+.+|=-|.+.|. .+..|++.|+ +|+.+|.+.+.++.+.+.. ..++.++.+|+.+....
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~-------g~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI-------GGGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-------CTTCEEEECCTTCHHHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc-------CCCeEEEEecCCCHHHHHHHHHHHH
Confidence 688999999987774 3444455665 7999999999887654332 24567788887654321
Q ss_pred -CCCceeEEEEcccc
Q psy11730 357 -IHSKFDIILTSETI 370 (496)
Q Consensus 357 -~~~~fD~Ii~~~~l 370 (496)
..+..|+++.+--+
T Consensus 99 ~~~G~iDiLVNNAG~ 113 (273)
T 4fgs_A 99 AEAGRIDVLFVNAGG 113 (273)
T ss_dssp HHHSCEEEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 12468988875543
No 495
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=26.09 E-value=1.6e+02 Score=27.56 Aligned_cols=75 Identities=16% Similarity=0.195 Sum_probs=44.5
Q ss_pred CCCCCeEEEecCcC-CH-HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccccCCCceeEE
Q psy11730 287 AVDKLSVLDVGCGA-GL-LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDII 364 (496)
Q Consensus 287 ~~~~~~VLDlGcGt-G~-~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I 364 (496)
.+.++++|=+|+|. |. .+..|++.|..+|+.++-+.+-.+...+... . .++.. .+++++. ...+|+|
T Consensus 117 ~l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~-----~-~~~~~--~~~~~l~---~~~~Div 185 (272)
T 3pwz_A 117 PLRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELD-----H-SRLRI--SRYEALE---GQSFDIV 185 (272)
T ss_dssp CCTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHC-----C-TTEEE--ECSGGGT---TCCCSEE
T ss_pred CccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhc-----c-CCeeE--eeHHHhc---ccCCCEE
Confidence 46789999999972 11 2233455777789999988876554332210 0 12332 2344432 2679999
Q ss_pred EEcccccc
Q psy11730 365 LTSETIYS 372 (496)
Q Consensus 365 i~~~~l~~ 372 (496)
+..-+.-.
T Consensus 186 InaTp~gm 193 (272)
T 3pwz_A 186 VNATSASL 193 (272)
T ss_dssp EECSSGGG
T ss_pred EECCCCCC
Confidence 98655443
No 496
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=25.91 E-value=32 Score=31.17 Aligned_cols=31 Identities=26% Similarity=0.279 Sum_probs=25.0
Q ss_pred hhhccCCceeeeCC--cceEEEEee-e--eeEEEee
Q psy11730 433 ELVQGPGETVFVPG--GWWHVVLNL-D--TTVAVTQ 463 (496)
Q Consensus 433 e~~~~~Ge~l~iP~--gWwh~v~~l-~--~~i~v~~ 463 (496)
+.++.+|++.+++. |..|.|.|. . .+|++.+
T Consensus 129 ~~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHv 164 (208)
T 2gm6_A 129 PTRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHV 164 (208)
T ss_dssp CEEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEE
T ss_pred eEEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEE
Confidence 56789999999998 999999997 3 4666554
No 497
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=25.85 E-value=79 Score=29.38 Aligned_cols=81 Identities=16% Similarity=0.061 Sum_probs=52.7
Q ss_pred CCCCCeEEEecCcCCH---HHHHHHHccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc-------
Q psy11730 287 AVDKLSVLDVGCGAGL---LGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV------- 356 (496)
Q Consensus 287 ~~~~~~VLDlGcGtG~---~~~~la~~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~------- 356 (496)
.++|+.+|=-|++.|. .+..|++.|. +|+.+|.+++.++.+.+.... ...++.++.+|+.+....
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~----~g~~~~~~~~Dv~~~~~v~~~~~~~ 80 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTR----KGYDAHGVAFDVTDELAIEAAFSKL 80 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHH----TTCCEEECCCCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHh----cCCcEEEEEeeCCCHHHHHHHHHHH
Confidence 5789999998987764 3444455664 799999999887765443221 234677788887654321
Q ss_pred --CCCceeEEEEcccccc
Q psy11730 357 --IHSKFDIILTSETIYS 372 (496)
Q Consensus 357 --~~~~fD~Ii~~~~l~~ 372 (496)
..+..|+++.+--+..
T Consensus 81 ~~~~G~iDiLVNNAG~~~ 98 (255)
T 4g81_D 81 DAEGIHVDILINNAGIQY 98 (255)
T ss_dssp HHTTCCCCEEEECCCCCC
T ss_pred HHHCCCCcEEEECCCCCC
Confidence 1357899887654443
No 498
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=25.29 E-value=1.5e+02 Score=28.26 Aligned_cols=78 Identities=18% Similarity=0.306 Sum_probs=49.6
Q ss_pred CCCCeEEEecCcCCHHHHHHHH----c-cCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCcccc--CCCc
Q psy11730 288 VDKLSVLDVGCGAGLLGLYTLM----N-GAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSAV--IHSK 360 (496)
Q Consensus 288 ~~~~~VLDlGcGtG~~~~~la~----~-~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~--~~~~ 360 (496)
+++++||=.| |+|.++..+++ . |..+|++++-++.-........ ...++.++.+|+.+.... .-..
T Consensus 19 ~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~------~~~~v~~~~~Dl~d~~~l~~~~~~ 91 (344)
T 2gn4_A 19 LDNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEF------NDPRMRFFIGDVRDLERLNYALEG 91 (344)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHH------CCTTEEEEECCTTCHHHHHHHTTT
T ss_pred hCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHh------cCCCEEEEECCCCCHHHHHHHHhc
Confidence 4578888777 45777766654 4 5558999999876554332211 124688899998764321 1246
Q ss_pred eeEEEEcccccc
Q psy11730 361 FDIILTSETIYS 372 (496)
Q Consensus 361 fD~Ii~~~~l~~ 372 (496)
+|+|+..-.+.+
T Consensus 92 ~D~Vih~Aa~~~ 103 (344)
T 2gn4_A 92 VDICIHAAALKH 103 (344)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 899998665544
No 499
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=25.28 E-value=60 Score=32.61 Aligned_cols=66 Identities=20% Similarity=0.270 Sum_probs=42.2
Q ss_pred CCeEEEecCcCCHHHHHHHH---ccCCeEEEEeCCHHHHHHhcCcccccccCCCCceEEEecccCCccc---cCCCceeE
Q psy11730 290 KLSVLDVGCGAGLLGLYTLM---NGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGSLSA---VIHSKFDI 363 (496)
Q Consensus 290 ~~~VLDlGcGtG~~~~~la~---~~~~~v~giD~s~~~i~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~---~~~~~fD~ 363 (496)
+.+|+=+|| |.++..+++ .....|++||.+++.++.++.. .+.++.+|..+... ..-...|+
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~----------g~~vi~GDat~~~~L~~agi~~A~~ 71 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF----------GMKVFYGDATRMDLLESAGAAKAEV 71 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT----------TCCCEESCTTCHHHHHHTTTTTCSE
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC----------CCeEEEcCCCCHHHHHhcCCCccCE
Confidence 346777776 555555543 3336799999999999887642 24557788765432 11356787
Q ss_pred EEEc
Q psy11730 364 ILTS 367 (496)
Q Consensus 364 Ii~~ 367 (496)
|++.
T Consensus 72 viv~ 75 (413)
T 3l9w_A 72 LINA 75 (413)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7763
No 500
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=25.18 E-value=42 Score=32.44 Aligned_cols=43 Identities=19% Similarity=0.090 Sum_probs=34.2
Q ss_pred CCCCeEEEecC--cCCHHHHHHHHccCCeEEEEeCCHHHHHHhcC
Q psy11730 288 VDKLSVLDVGC--GAGLLGLYTLMNGAAHVSFQDYNQEVIESLTL 330 (496)
Q Consensus 288 ~~~~~VLDlGc--GtG~~~~~la~~~~~~v~giD~s~~~i~~a~~ 330 (496)
.++++||=+|+ |.|..+..+++....+|++++.+++..+.+++
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~ 202 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS 202 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 35889999997 45888888887655699999999888777664
Done!