RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11730
(496 letters)
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 68.1 bits (165), Expect = 4e-13
Identities = 21/171 (12%), Positives = 45/171 (26%), Gaps = 35/171 (20%)
Query: 47 KFKIVKENVERIHVKDYSPQEFIEKYEKPNKPVVIKGVTENWNATYKWTLEKLGKKYRNQ 106
+ + R+ D E+ + +PVV+ + A KW LE L + N
Sbjct: 20 SYSFPTRPIPRLSQSD----PRAEELIENEEPVVLTDTNLVYPA-LKWDLEYLQENIGNG 74
Query: 107 KFKCGEDNHGYSKLGKKYRNQKFKCGEDNHGYSH-------------------------- 140
F + + + F+ +
Sbjct: 75 DFSVYSASTHKFLYYDEKKMANFQNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQ 134
Query: 141 ----PRRKKLLDDYEVPIYFQDDLFQYAGEDKRPPYRWFVMGPARSGTGIH 187
+K++ D+ + + Q + ++G + T H
Sbjct: 135 TLNDTVGRKIVMDFLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAH 185
Score = 43.8 bits (102), Expect = 3e-05
Identities = 16/85 (18%), Positives = 27/85 (31%), Gaps = 6/85 (7%)
Query: 382 VWCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYPRTQLPSWPTEWKPLELVQGPGET 441
P +Q + P + E V GPG+
Sbjct: 202 CILFPPDQFECLYPYPVHHPCDRQ-----SQVDFDNPDYERFPNFQNVVGYETVVGPGDV 256
Query: 442 VFVPGGWWHVVLNLDT-TVAVTQNF 465
+++P WWH + +L + +T NF
Sbjct: 257 LYIPMYWWHHIESLLNGGITITVNF 281
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC
{Bacillus subtilis [TaxId: 1423]}
Length = 319
Score = 52.6 bits (125), Expect = 4e-08
Identities = 22/133 (16%), Positives = 39/133 (29%), Gaps = 7/133 (5%)
Query: 64 SPQEFIEKYEKPNKPVVIKGVTENWNATYKWT----LEKLGKKYRNQKFKCGEDNHGYSK 119
+ EF+E+Y P KP+V +G E + + + LE + Y N G+ S+
Sbjct: 10 TMSEFLEEYW-PVKPLVARGEVERFTSIPGFEKVRTLENVLAIYNNPVMVVGDAVIEESE 68
Query: 120 LGKKYRNQKFKCGED--NHGYSHPRRKKLLDDYEVPIYFQDDLFQYAGEDKRPPYRWFVM 177
+ G + L +V + + +
Sbjct: 69 GITDRFLVSPAEALEWYEKGAALEFDFTDLFIPQVRRWIEKLKAELRLPAGTSSKAIVYA 128
Query: 178 GPARSGTGIHIDP 190
G H D
Sbjct: 129 AKNGGGFKAHFDA 141
Score = 49.9 bits (118), Expect = 3e-07
Identities = 14/90 (15%), Positives = 29/90 (32%), Gaps = 7/90 (7%)
Query: 383 WCLFPTHTPKDLLKVTSAEGGKQRDEAIT-WFSIIYPRTQLPSWPTEWKPLELVQGPGET 441
W L + ++ + + ++ P+ LP + PG
Sbjct: 155 WKLAKNENVSNPMQHYDLSEAPYYPDDLQSYWKGDPPKEDLPDA------EIVNLTPGTM 208
Query: 442 VFVPGGWWHVVLNLDTTVAVTQNFCSHTNF 471
+++P G WH + T+A+ F
Sbjct: 209 LYLPRGLWHSTKSDQATLALNITFGQPAWL 238
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 39.4 bits (91), Expect = 6e-04
Identities = 17/85 (20%), Positives = 28/85 (32%), Gaps = 4/85 (4%)
Query: 280 NFIKDNVAVDK-LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD 338
N + N + K VLDVG G G+L ++ GA V + + + I+
Sbjct: 23 NSMFHNRHLFKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSSISDYA---VKIVKANK 79
Query: 339 NLEKCKFYHGDWGSLSAVIHSKFDI 363
G + + I
Sbjct: 80 LDHVVTIIKGKVEEVELPVEKVDII 104
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 39.1 bits (90), Expect = 8e-04
Identities = 21/86 (24%), Positives = 37/86 (43%), Gaps = 4/86 (4%)
Query: 280 NFIKDNVAVDK-LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD 338
+FI N + K VLDVGCG G+L ++ GA V D ++ + +++ +I+
Sbjct: 25 DFIYQNPHIFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSEILYQAM---DIIRLNK 81
Query: 339 NLEKCKFYHGDWGSLSAVIHSKFDII 364
+ G + + II
Sbjct: 82 LEDTITLIKGKIEEVHLPVEKVDVII 107
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 35.7 bits (81), Expect = 0.008
Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 6/109 (5%)
Query: 280 NFIKDNVAVDKL----SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILM 335
NFIK + SVLD+GCG G L G D + I
Sbjct: 11 NFIKACLIRLYTKRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDAR--VRAR 68
Query: 336 NTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWC 384
N K F D + +FD+I + + + + ++ L +
Sbjct: 69 NMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQ 117
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB
{Salmonella typhimurium [TaxId: 90371]}
Length = 198
Score = 35.3 bits (80), Expect = 0.009
Identities = 31/196 (15%), Positives = 55/196 (28%), Gaps = 10/196 (5%)
Query: 265 YEGGYKIWECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEV 324
+ Y + D+L K V LD+GCG G LY NG D
Sbjct: 9 FTEKYGLTRTHSDVLAAAK---VVAPGRTLDLGCGNGRNSLYLAANGY------DVTAWD 59
Query: 325 IESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWC 384
++ N+ + ++D IL++ + + +
Sbjct: 60 KNPASMANLERIKAAEGLDNLQTDLVDLNTLTFDGEYDFILSTVVMMFLEAQTIPGLIAN 119
Query: 385 LFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYPRTQLPSWPTEWKPLELVQGPGETVFV 444
+ P + A F + +L + W L+ + GE
Sbjct: 120 MQRCTKPGGYN-LIVAAMDTPDFPCTVGFPFAFKEGELRRYYEGWDMLKYNEDVGELHRT 178
Query: 445 PGGWWHVVLNLDTTVA 460
+ L T +A
Sbjct: 179 DENGNRIKLRFATMLA 194
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 35.6 bits (81), Expect = 0.011
Identities = 32/151 (21%), Positives = 57/151 (37%), Gaps = 19/151 (12%)
Query: 280 NFIKDNVAVDK-LSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTD 338
N I N + K VLDVGCG G+L ++ +GA HV D + + + L+ +
Sbjct: 28 NAIIQNKDLFKDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS----SIIEMAKELVELN 83
Query: 339 NLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWC-----------LFP 387
+ K DII++ Y + + + TV +FP
Sbjct: 84 GFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143
Query: 388 THTPKDLLKVTSAEGGKQRDEAITWFSIIYP 418
L + ++ +DE + ++ +Y
Sbjct: 144 DKCSIHLAGLEDSQ---YKDEKLNYWQDVYG 171
>d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 309
Score = 35.1 bits (80), Expect = 0.015
Identities = 15/76 (19%), Positives = 27/76 (35%), Gaps = 5/76 (6%)
Query: 293 VLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD--- 349
VL++ G+ L GA D +++ I N ++ ++ D
Sbjct: 136 VLNLFGYTGVASLVAAAAGAEVTHV-DASKKAIG-WAKENQVLAGLEQAPIRWICEDAMK 193
Query: 350 WGSLSAVIHSKFDIIL 365
+ S +DIIL
Sbjct: 194 FIQREERRGSTYDIIL 209
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 280
Score = 35.0 bits (79), Expect = 0.016
Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 12/107 (11%)
Query: 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLT------------LPNILMNT 337
++ +L +G GAG + L L A N EV+E + N+
Sbjct: 41 EIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVK 100
Query: 338 DNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWC 384
K L K+D I + +Y V + L +
Sbjct: 101 FAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFH 147
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793
{Pyrococcus horikoshii [TaxId: 53953]}
Length = 260
Score = 34.8 bits (79), Expect = 0.018
Identities = 26/162 (16%), Positives = 53/162 (32%), Gaps = 11/162 (6%)
Query: 209 SKEFKPIDEILTNIISELGKQVENLTSVSNIKLLRTPLFEYETFVNISHTDLKPNVYEGG 268
E +P + + +E+ V+ + +I + + + T N +
Sbjct: 24 RPELEPYKHRIAEVYAEV-LGVKTVLRKGHIHGETRKPDYELLYGSDTVTVHVENGIKYK 82
Query: 269 YKIWECTFDLLNF-----IKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQE 323
+ + F N + D+ V+D+ G G L L + G A V + +
Sbjct: 83 LDVAKIMFSPANVKERVRMAKVAKPDE-LVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPY 141
Query: 324 VIESLTLPNILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIIL 365
+ L L ++ + Y+ D + D IL
Sbjct: 142 TFKFLVENIHLNKVED--RMSAYNMDN--RDFPGENIADRIL 179
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 32.5 bits (73), Expect = 0.092
Identities = 19/108 (17%), Positives = 41/108 (37%), Gaps = 10/108 (9%)
Query: 277 DLLNFIKDNVA--VDKLSVLDVGCGAGLLGLY--TLMNGAAHVSFQDYNQEVIESLTLPN 332
D ++F+ + V + ++D GCG G LGL L+ + + D + ++
Sbjct: 13 DYVSFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELF 72
Query: 333 ILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLL 380
L+ D+ ++ K+DI + + + +L
Sbjct: 73 RLLPYDSEFLEGDATEIE------LNDKYDIAICHAFLLHMTTPETML 114
>d2esra1 c.66.1.46 (A:28-179) Putative methyltransferase SPy1538
{Streptococcus pyogenes [TaxId: 1314]}
Length = 152
Score = 30.6 bits (68), Expect = 0.22
Identities = 12/108 (11%), Positives = 34/108 (31%), Gaps = 8/108 (7%)
Query: 273 ECTFDLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPN 332
F+++ + VLD+ G+G L + + G + + N++ +
Sbjct: 3 GAIFNMIGPY-----FNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNI 57
Query: 333 ILMNTDNLEKCKFYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLL 380
I+ +N + + ++ + Y+ +
Sbjct: 58 IMTKAENRFTLLKMEAERAI---DCLTGRFDLVFLDPPYAKETIVATI 102
>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 197
Score = 30.5 bits (68), Expect = 0.28
Identities = 26/149 (17%), Positives = 55/149 (36%), Gaps = 17/149 (11%)
Query: 278 LLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNT 337
L I ++ + SV+D G G G+L + + GA V+ D + + IE+
Sbjct: 37 FLIEIYNDGNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDPDAIETA--------K 88
Query: 338 DNLEKCKFYHGDWGSLS-----AVIHSKFDIILTSETIYSV-ANYNKLLTVWCLFPTHTP 391
N F D +S +++ F ++ + + + ++ +
Sbjct: 89 RNCGGVNFMVADVSEISGKYDTWIMNPPFGSVVKHSDRAFIDKAFETSMWIYSIGNAKA- 147
Query: 392 KDLLKVTSAEGGKQRDEAITWFSIIYPRT 420
+D L+ + G E + ++ PR
Sbjct: 148 RDFLRREFSARGDVFREEKVYITV--PRI 174
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 30.5 bits (68), Expect = 0.32
Identities = 14/133 (10%), Positives = 32/133 (24%), Gaps = 5/133 (3%)
Query: 289 DKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHG 348
+D+G GA + ++ + N+ N +
Sbjct: 61 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 120
Query: 349 DWGSLSAVIHS----KFDIILTSETIYSVANYNKLLTVWCLFPTHTPKDLLKVTSAEGGK 404
L + +D + + ++ K + P + E
Sbjct: 121 QKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRR-PPPSSVNTGGITEIMA 179
Query: 405 QRDEAITWFSIIY 417
+ E II+
Sbjct: 180 EGGELEFVKRIIH 192
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 30.7 bits (68), Expect = 0.33
Identities = 8/86 (9%), Positives = 20/86 (23%), Gaps = 4/86 (4%)
Query: 293 VLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352
+LD+G G+G + + + D + +
Sbjct: 37 ILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYV 96
Query: 353 LSAVIHSKFDIILTSETIYSVANYNK 378
+ K D+ + +
Sbjct: 97 A----NEKCDVAACVGATWIAGGFAG 118
>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa
(LmjF30.0810) {Leishmania major [TaxId: 5664]}
Length = 254
Score = 29.9 bits (66), Expect = 0.66
Identities = 12/71 (16%), Positives = 17/71 (23%)
Query: 280 NFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDN 339
NFI LD G G G + L A + + ++E M
Sbjct: 84 NFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGK 143
Query: 340 LEKCKFYHGDW 350
Sbjct: 144 FILASMETATL 154
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 29.6 bits (65), Expect = 0.67
Identities = 9/58 (15%), Positives = 17/58 (29%), Gaps = 1/58 (1%)
Query: 293 VLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350
VLDV G G + V D +++++ +E +
Sbjct: 19 VLDVATGGGHVANA-FAPFVKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQM 75
>d1j58a_ b.82.1.2 (A:) Oxalate decarboxylase OxdC (YvrK) {Bacillus
subtilis [TaxId: 1423]}
Length = 372
Score = 29.6 bits (66), Expect = 0.97
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 437 GPGETVFVPGGWWHVVLNLDTTVAV 461
G+ +VP H V N+ V
Sbjct: 299 QAGDVGYVPFAMGHYVENIGDEPLV 323
Score = 27.3 bits (60), Expect = 4.6
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 438 PGETVFVPGGWWHVVLNLD 456
G+ + P G H + L+
Sbjct: 121 EGDLWYFPSGLPHSIQALE 139
>d1lr5a_ b.82.1.2 (A:) Auxin binding protein {Maize (Zea mays)
[TaxId: 4577]}
Length = 160
Score = 28.7 bits (63), Expect = 1.1
Identities = 12/61 (19%), Positives = 20/61 (32%), Gaps = 4/61 (6%)
Query: 405 QRDEAITWFSIIYPRTQL----PSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVA 460
R F+++ + L S +P E+ T +P H V N D
Sbjct: 57 HRHSCEEVFTVLKGKGTLLMGSSSLKYPGQPQEIPFFQNTTFSIPVNDPHQVWNSDEHED 116
Query: 461 V 461
+
Sbjct: 117 L 117
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 28.9 bits (63), Expect = 1.1
Identities = 16/129 (12%), Positives = 34/129 (26%), Gaps = 8/129 (6%)
Query: 292 SVLDVGCGAGLLGLYTLMNGAAHV-------SFQDYNQEVIESLTLPNILMNTDNLEKCK 344
LD+ CG G L + + P + +
Sbjct: 40 DYLDLACGTGNLTENLCPKFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN 99
Query: 345 FYHGDWGSLSAVIHSKFDIILTSETIYSVANYNKLLTVWCLFPTHTPKDLLKVTSAEGGK 404
+ D + +V+N+ K V+ F ++ L +V
Sbjct: 100 RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFI-FDINSYYKLSQVLGNNDFN 158
Query: 405 QRDEAITWF 413
D+ + ++
Sbjct: 159 YDDDEVFYY 167
>d1juha_ b.82.1.5 (A:) Quercetin 2,3-dioxygenase {Aspergillus
japonicus [TaxId: 34381]}
Length = 348
Score = 29.4 bits (65), Expect = 1.1
Identities = 6/29 (20%), Positives = 8/29 (27%)
Query: 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAV 461
V G+ VP H D +
Sbjct: 93 TRVLSSGDYGSVPRNVTHTFQIQDPDTEM 121
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 28.8 bits (63), Expect = 1.3
Identities = 14/87 (16%), Positives = 30/87 (34%), Gaps = 3/87 (3%)
Query: 292 SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWG 351
VLDV CG G+ + + G + S ++ + +L +K +W
Sbjct: 59 RVLDVACGTGVDSIMLVEEGFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 118
Query: 352 SLSAVIH---SKFDIILTSETIYSVAN 375
+L + +I + + +
Sbjct: 119 TLDKDVPAGDGFDAVICLGNSFAHLPD 145
>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 186
Score = 28.2 bits (62), Expect = 1.4
Identities = 16/72 (22%), Positives = 21/72 (29%), Gaps = 3/72 (4%)
Query: 293 VLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352
+DVGCG G + L V D N E I + L + GD
Sbjct: 37 AVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTE--MNLQRHGLGDNVTLMEGDAPE 93
Query: 353 LSAVIHSKFDII 364
I +
Sbjct: 94 ALCKIPDIDIAV 105
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 28.1 bits (61), Expect = 1.8
Identities = 11/50 (22%), Positives = 17/50 (34%), Gaps = 1/50 (2%)
Query: 277 DLLNFIKDNVAVDKLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIE 326
DL + V VL CG + L HV + ++ +E
Sbjct: 8 DLQQYWSSLNVVPGARVLVPLCGKSQDMSW-LSGQGYHVVGAELSEAAVE 56
>d2jioa1 b.52.2.2 (A:601-723) Periplasmic nitrate reductase alpha
chain, NapA {Desulfovibrio desulfuricans [TaxId: 876]}
Length = 123
Score = 27.3 bits (60), Expect = 2.3
Identities = 12/104 (11%), Positives = 31/104 (29%), Gaps = 9/104 (8%)
Query: 360 KFDIILTSETIYSVANYNKLLTVWCLFPTHTPKDLLKVTSAEGGKQ--RDEAITWFSIIY 417
++ + LTS + + + P +++ + + +
Sbjct: 8 EYPLYLTSMRVIDHWHTATMTGKVPELQKANPIAFVEINEEDAARTGIKHGDSVIVETRR 67
Query: 418 PRTQLPSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAV 461
+LP+ ++ PG + VP ++N A
Sbjct: 68 DAMELPARVSDVCR------PG-LIAVPFFDPKKLVNKLFLDAT 104
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 28.0 bits (61), Expect = 2.3
Identities = 17/92 (18%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 293 VLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDWGS 352
VLD+G GAG L D +E++E + +N+ +
Sbjct: 20 VLDIGAGAGHTALA-FSPYVQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLP- 77
Query: 353 LSAVIHSKFDIILTSETIYSVANYNKLLTVWC 384
FDII + ++ K +
Sbjct: 78 ---FPDDSFDIITCRYAAHHFSDVRKAVREVA 106
>d2ah2a2 b.68.1.1 (A:1-399) Trypanosoma sialidase {Parasitic
flagellate protozoan (Trypanosoma cruzi) [TaxId: 5693]}
Length = 399
Score = 28.2 bits (62), Expect = 2.6
Identities = 16/81 (19%), Positives = 29/81 (35%), Gaps = 4/81 (4%)
Query: 373 VANYNKLLTVWCLFPTHTPKDLL----KVTSAEGGKQRDEAITWFSIIYPRTQLPSWPTE 428
V +YN + W D+L +VT + G + +I W S + + P+
Sbjct: 110 VGSYNSSRSYWTSHGDARDWDILLAVGEVTKSTAGGKITASIKWGSPVSLKEFFPAEMEG 169
Query: 429 WKPLELVQGPGETVFVPGGWW 449
+ + G G + G
Sbjct: 170 MHTNQFLGGAGVAIVASNGNL 190
>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine
N-methyltransferase, PNMTase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 263
Score = 27.9 bits (61), Expect = 2.8
Identities = 6/39 (15%), Positives = 18/39 (46%)
Query: 290 KLSVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESL 328
+++D+G G + L + + ++ D+ + + L
Sbjct: 55 GRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQEL 93
>d2d40a1 b.82.1.23 (A:35-342) Gentisate 1,2-dioxygenase {Escherichia
coli [TaxId: 562]}
Length = 308
Score = 27.8 bits (61), Expect = 3.0
Identities = 11/72 (15%), Positives = 21/72 (29%), Gaps = 7/72 (9%)
Query: 405 QRDEAITWFSIIYPRTQLPSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQN 464
R I+ + + E P+ G+ + P WH N +
Sbjct: 70 HRHNQSALRFIVEGKGAFTAVDGERTPM----NEGDFILTPQWRWHDHGNPGDEPVI--- 122
Query: 465 FCSHTNFPVVYH 476
+ + P+V
Sbjct: 123 WLDGLDLPLVNI 134
Score = 26.3 bits (57), Expect = 8.8
Identities = 3/26 (11%), Positives = 6/26 (23%)
Query: 437 GPGETVFVPGGWWHVVLNLDTTVAVT 462
+ VP +V +
Sbjct: 265 SAKDIFVVPTWHGVSFQTTQDSVLFS 290
>d3bu7a1 b.82.1.23 (A:19-373) Gentisate 1,2-dioxygenase
{Silicibacter pomeroyi [TaxId: 89184]}
Length = 355
Score = 27.7 bits (61), Expect = 3.0
Identities = 5/25 (20%), Positives = 6/25 (24%)
Query: 437 GPGETVFVPGGWWHVVLNLDTTVAV 461
+ VP WH N
Sbjct: 299 SEHDIFCVPAWTWHEHCNTQERDDA 323
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus
aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Length = 106
Score = 26.4 bits (58), Expect = 4.0
Identities = 8/68 (11%), Positives = 24/68 (35%), Gaps = 13/68 (19%)
Query: 7 TSKVLDSRARKRIKETKKRARPELNGKDAWFELGYADKFDKFKIVKENVERIHVKDYSPQ 66
R +++ +K+ L KF++ + + + +++ Q
Sbjct: 50 AVYDNIRRTGDLVEDYEKK-------------LELYQKFEQRREIYDEMKQHLSNPEQIQ 96
Query: 67 EFIEKYEK 74
+I++ E
Sbjct: 97 RYIQQLED 104
>d1zroa1 a.264.1.1 (A:8-282) Erythrocyte binding antigen region II
{Plasmodium falciparum [TaxId: 5833]}
Length = 275
Score = 27.3 bits (60), Expect = 4.2
Identities = 9/46 (19%), Positives = 16/46 (34%)
Query: 86 ENWNATYKWTLEKLGKKYRNQKFKCGEDNHGYSKLGKKYRNQKFKC 131
+W K+ L K+Y QK + K+ + + K
Sbjct: 216 RDWIIRSKFEWHTLSKEYETQKVPKENAENYLIKISENKNDAKVSL 261
>d1iica2 d.108.1.2 (A:219-455) N-myristoyl transferase, NMT {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 27.2 bits (60), Expect = 4.2
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 4/45 (8%)
Query: 305 LYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349
L L+ A ++ ++ N +V +L NT L+ KF GD
Sbjct: 159 LCELIYDACILA-KNANMDVFNAL---TSQDNTLFLDDLKFGPGD 199
>d1iyka2 d.108.1.2 (A:225-451) N-myristoyl transferase, NMT {Yeast
(Candida albicans) [TaxId: 5476]}
Length = 227
Score = 27.1 bits (60), Expect = 4.5
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 4/45 (8%)
Query: 305 LYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGD 349
L L+ A S + + +V L NT L+ CKF GD
Sbjct: 148 LNELITDALITS-KKFGVDVFNCL---TCQDNTYFLKDCKFGSGD 188
>d2et1a1 b.82.1.2 (A:1-201) Germin {Barley (Hordeum vulgare) [TaxId:
4513]}
Length = 201
Score = 26.8 bits (59), Expect = 4.5
Identities = 13/56 (23%), Positives = 19/56 (33%), Gaps = 3/56 (5%)
Query: 409 AITWFSIIYPRTQL---PSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAV 461
A ++ + S + K V GET +P G H N+ T A
Sbjct: 93 ATEIGMVMKGELLVGILGSLDSGNKLYSRVVRAGETFVIPRGLMHFQFNVGKTEAY 148
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus
pyogenes [TaxId: 1314]}
Length = 106
Score = 25.9 bits (57), Expect = 4.5
Identities = 7/68 (10%), Positives = 17/68 (25%), Gaps = 13/68 (19%)
Query: 7 TSKVLDSRARKRIKETKKRARPELNGKDAWFELGYADKFDKFKIVKENVERIHVKDYSPQ 66
R K ++ + + L + + +++ + D Q
Sbjct: 48 AVYDNIKRTEKILETYEMK-------------LHMYSDYVVRSEIFDDMIAHYPHDEYLQ 94
Query: 67 EFIEKYEK 74
E I
Sbjct: 95 EKISILTS 102
>d1y3ta1 b.82.1.5 (A:5-334) Hypothetical protein YxaG {Bacillus
subtilis [TaxId: 1423]}
Length = 330
Score = 27.2 bits (59), Expect = 5.0
Identities = 5/25 (20%), Positives = 8/25 (32%)
Query: 437 GPGETVFVPGGWWHVVLNLDTTVAV 461
PG+ + VP H +
Sbjct: 258 NPGDFLHVPANTVHSYRLDSHYTKM 282
>d1sfna_ b.82.1.11 (A:) Hypothetical protein DR1152 {Deinococcus
radiodurans [TaxId: 1299]}
Length = 245
Score = 27.0 bits (59), Expect = 5.8
Identities = 4/25 (16%), Positives = 9/25 (36%)
Query: 437 GPGETVFVPGGWWHVVLNLDTTVAV 461
+ V++P G H++
Sbjct: 91 REYDYVYLPAGEKHMLTAKTDARVS 115
>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase,
INMT {Human (Homo sapiens) [TaxId: 9606]}
Length = 257
Score = 26.6 bits (57), Expect = 6.3
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 292 SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIE 326
+++D+G G + + + ++ D+ E
Sbjct: 54 TLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNRE 88
>d1fxza2 b.82.1.2 (A:297-470) Seed storage 7S protein {Soybean
(Glycine max), proglycinin [TaxId: 3847]}
Length = 174
Score = 26.1 bits (57), Expect = 6.9
Identities = 6/50 (12%), Positives = 13/50 (26%), Gaps = 3/50 (6%)
Query: 438 PGETVFVPGGWWHVVLNLDTT---VAVTQNFCSHTNFPVVYHKTIRGRPK 484
G + VP + + V+ N + + P+
Sbjct: 93 EGRVLIVPQNFVVAARSQSDNFEYVSFKTNDTPMIGTLAGANSLLNALPE 142
>d1j83a_ b.18.1.12 (A:) Endo-1,4-beta glucanase EngF {Clostridium
cellulovorans [TaxId: 1493]}
Length = 180
Score = 26.1 bits (57), Expect = 7.5
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 202 DDSPAVESKEFKPIDEILTNIISELGKQVENLTSVSNIKL 241
+DSP + D ++TN+I +G +N+ S+ NIK
Sbjct: 140 NDSPNFNTIATDAADSVVTNMILFVGSNSDNI-SLDNIKF 178
>d1x82a_ b.82.1.7 (A:) Glucose-6-phosphate isomerase, GPI {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 190
Score = 26.2 bits (57), Expect = 7.8
Identities = 9/56 (16%), Positives = 18/56 (32%)
Query: 412 WFSIIYPRTQLPSWPTEWKPLELVQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCS 467
+ + + + E + PG V+VP W H +N+ +
Sbjct: 99 VYVALKGKGGMLLQTPEGDAKWISMEPGTVVYVPPYWAHRTVNIGDEPFIFLAIYP 154
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 26.4 bits (57), Expect = 8.3
Identities = 7/59 (11%), Positives = 18/59 (30%), Gaps = 1/59 (1%)
Query: 292 SVLDVGCGAGLLGLYTLMNGAAHVSFQDYNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350
++L++G G L ++ + ++E I T + +
Sbjct: 23 NLLELGSFKGDFTSR-LQEHFNDITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPR 80
>d1rc6a_ b.82.1.11 (A:) Hypothetical protein YlbA {Escherichia coli
[TaxId: 562]}
Length = 253
Score = 26.3 bits (57), Expect = 8.5
Identities = 4/29 (13%), Positives = 8/29 (27%)
Query: 433 ELVQGPGETVFVPGGWWHVVLNLDTTVAV 461
G ++ P G +N +
Sbjct: 92 TFALSEGGYLYCPPGSLMTFVNAQAEDSQ 120
>d2f8la1 c.66.1.45 (A:2-329) Hypothetical protein Lmo1582 {Listeria
monocytogenes [TaxId: 1639]}
Length = 328
Score = 26.5 bits (57), Expect = 9.5
Identities = 25/151 (16%), Positives = 49/151 (32%), Gaps = 20/151 (13%)
Query: 217 EILTNIISELGKQVENLTSVSNIKLLRTPLFEYETFVNISHTDLKPNVYEGGYKIWECTF 276
E N+ + Q E L+S +KL +E N S+ +++ +
Sbjct: 33 ETGENLFQKEVLQKEELSSEKQLKLQA--SYESIELENFSNEEIR-KGLQLALLKGMKHG 89
Query: 277 -------------DLLNFIKDNVAVDK--LSVLDVGCGAG--LLGLYTLMNGAAHVSFQD 319
++ ++ + V K +S+LD CG L + + V
Sbjct: 90 IQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHA 149
Query: 320 YNQEVIESLTLPNILMNTDNLEKCKFYHGDW 350
+V + L ++ +K H D
Sbjct: 150 SGVDVDDLLISLALVGADLQRQKMTLLHQDG 180
>d1ci9a_ e.3.1.1 (A:) Esterase EstB {Burkholderia gladioli [TaxId:
28095]}
Length = 377
Score = 26.2 bits (56), Expect = 9.5
Identities = 18/106 (16%), Positives = 27/106 (25%)
Query: 375 NYNKLLTVWCLFPTHTPKDLLKVTSAEGGKQRDEAITWFSIIYPRTQLPSWPTEWKPLEL 434
+ P T LL TS G + A + + + + +
Sbjct: 91 PEFRPRLADGSEPLVTIHHLLTHTSGLGYWLLEGAGSVYDRLGISDGIDLRDFDLDENLR 150
Query: 435 VQGPGETVFVPGGWWHVVLNLDTTVAVTQNFCSHTNFPVVYHKTIR 480
F PG W L LD AV + V +
Sbjct: 151 RLASAPLSFAPGSGWQYSLALDVLGAVVERATGQPLAAAVDALVAQ 196
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 26.2 bits (57), Expect = 9.9
Identities = 8/36 (22%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 293 VLDVGCGAGLLGLY--TLMNGAAHVSFQDYNQEVIE 326
+L+VG G+G + Y +NG ++ + +++ ++
Sbjct: 89 ILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLK 124
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.137 0.425
Gapped
Lambda K H
0.267 0.0534 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,975,150
Number of extensions: 97761
Number of successful extensions: 406
Number of sequences better than 10.0: 1
Number of HSP's gapped: 403
Number of HSP's successfully gapped: 67
Length of query: 496
Length of database: 2,407,596
Length adjustment: 89
Effective length of query: 407
Effective length of database: 1,185,626
Effective search space: 482549782
Effective search space used: 482549782
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.4 bits)