Your job contains 1 sequence.
>psy11733
MTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNI
CVKISIQYVMQTYNVNLYIQLHRKLSESLSSLKELFLVMFYLELYYFPHPIMENQLNFSF
YLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESI
RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSY
VNKAEATPDFAEGKDNNQAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLS
PNNIATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLL
AQIMDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELM
TLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNIC
VKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQTHTRTNDFK
VAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQD
LESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHRKLSESLS
SLKELFLVMFYLELYYFPHPIMENQLNFSFYLNSTGALPDVASSGNMGPQDIPTLDPLLI
ETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDY
CTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEVIFSSGFKLFLELEPQLR
DILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF
EKSLNVGKEYARKSNMLILRSAMQVDVHMEDNDNNEQEMIIVENASLSPTISRSDENGRG
SEMSVATGSEL
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11733
(971 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-041111-240 - symbol:gps1 "G protein pathway... 1334 3.1e-140 2
FB|FBgn0027057 - symbol:CSN1b "COP9 complex homolog subun... 1313 4.4e-139 2
UNIPROTKB|F1NB10 - symbol:GPS1 "Uncharacterized protein" ... 1310 1.1e-137 2
UNIPROTKB|F1NJQ7 - symbol:GPS1 "Uncharacterized protein" ... 1310 1.1e-137 2
MGI|MGI:2384801 - symbol:Gps1 "G protein pathway suppress... 1309 1.1e-137 2
UNIPROTKB|F1P996 - symbol:GPS1 "Uncharacterized protein" ... 1309 1.1e-137 2
UNIPROTKB|F1MP10 - symbol:GPS1 "Uncharacterized protein" ... 1307 1.7e-137 2
RGD|621532 - symbol:Gps1 "G protein pathway suppressor 1"... 1306 2.2e-137 2
UNIPROTKB|C9JFE4 - symbol:GPS1 "G protein pathway suppres... 1296 2.5e-136 2
UNIPROTKB|Q13098 - symbol:GPS1 "COP9 signalosome complex ... 1296 2.5e-136 2
DICTYBASE|DDB_G0283587 - symbol:csn1 "COP9 signalosome co... 860 5.4e-86 1
TAIR|locus:2098851 - symbol:FUS6 "FUSCA 6" species:3702 "... 847 1.3e-84 1
UNIPROTKB|J3KSA5 - symbol:GPS1 "COP9 signalosome complex ... 485 3.1e-61 2
ASPGD|ASPL0000047276 - symbol:csnA species:162425 "Emeric... 584 4.5e-56 1
FB|FBgn0028838 - symbol:CSN1a "COP9 complex homolog subun... 515 5.2e-56 3
POMBASE|SPBC215.03c - symbol:csn1 "COP9/signalosome compl... 423 1.2e-38 1
WB|WBGene00000813 - symbol:csn-1 species:6239 "Caenorhabd... 237 2.4e-29 2
UNIPROTKB|Q9GS00 - symbol:csn-1 "COP9 signalosome complex... 237 2.4e-29 2
UNIPROTKB|J3KTB0 - symbol:GPS1 "COP9 signalosome complex ... 177 1.1e-22 2
UNIPROTKB|Q6UV22 - symbol:PSMD6 "KIAA0107 isoform" specie... 262 2.3e-21 1
UNIPROTKB|F1N903 - symbol:PSMD6 "Uncharacterized protein"... 274 3.1e-21 1
RGD|735127 - symbol:Psmd6 "proteasome (prosome, macropain... 266 2.4e-20 1
UNIPROTKB|J3QS88 - symbol:GPS1 "COP9 signalosome complex ... 177 3.6e-20 2
UNIPROTKB|F1MXE4 - symbol:PSMD6 "26S proteasome non-ATPas... 263 5.6e-20 1
UNIPROTKB|Q3T0B2 - symbol:PSMD6 "26S proteasome non-ATPas... 263 5.6e-20 1
MGI|MGI:1913663 - symbol:Psmd6 "proteasome (prosome, macr... 263 5.6e-20 1
UNIPROTKB|Q15008 - symbol:PSMD6 "26S proteasome non-ATPas... 262 7.4e-20 1
UNIPROTKB|C9IZE4 - symbol:PSMD6 "Proteasome (Prosome, mac... 262 1.9e-19 1
ZFIN|ZDB-GENE-040426-1038 - symbol:psmd6 "proteasome (pro... 258 2.2e-19 1
UNIPROTKB|E2RN00 - symbol:PSMD6 "Uncharacterized protein"... 264 2.2e-19 1
DICTYBASE|DDB_G0270188 - symbol:psmD6 "26S proteasome non... 256 3.4e-19 1
FB|FBgn0028688 - symbol:Rpn7 "Regulatory particle non-ATP... 255 5.4e-19 1
WB|WBGene00004463 - symbol:rpn-7 species:6239 "Caenorhabd... 246 8.8e-18 1
GENEDB_PFALCIPARUM|PF11_0303 - symbol:PF11_0303 "26S prot... 245 8.9e-18 1
TAIR|locus:2126798 - symbol:AT4G24820 "AT4G24820" species... 241 2.4e-17 1
SGD|S000006312 - symbol:RPN7 "non-ATPase regulatory subun... 233 3.2e-16 1
UNIPROTKB|J3QL53 - symbol:GPS1 "COP9 signalosome complex ... 177 2.7e-12 1
CGD|CAL0003998 - symbol:RPN7 species:5476 "Candida albica... 186 4.4e-11 1
POMBASE|SPBC582.07c - symbol:rpn7 "19S proteasome regulat... 172 1.6e-09 1
ASPGD|ASPL0000043868 - symbol:AN1922 species:162425 "Emer... 121 9.5e-09 2
>ZFIN|ZDB-GENE-041111-240 [details] [associations]
symbol:gps1 "G protein pathway suppressor 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-041111-240 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 HOGENOM:HOG000091977 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOVERGEN:HBG030722
EMBL:BX897685 IPI:IPI00774251 UniGene:Dr.52385
Ensembl:ENSDART00000141106 Uniprot:B0S7K9
Length = 490
Score = 1334 (474.7 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 260/366 (71%), Positives = 307/366 (83%)
Query: 121 YLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESI 180
+L G +PD G + P P LD E+ KKA +KLEKLD DLKNYK NSIKESI
Sbjct: 105 FLEVQG-VPDAVPEGAVEP---PPLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESI 160
Query: 181 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSY 240
RRGHDDLGDHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSY
Sbjct: 161 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSY 220
Query: 241 VNKAEATPDFAE--G-KDN-NQAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFP 296
V+KAE+TP+ AE G +D+ NQAV TKLK AAG AELA+RKYK AA+ FLQA FD+CDFP
Sbjct: 221 VSKAESTPEIAEQRGERDSQNQAVLTKLKCAAGKAELASRKYKPAAKCFLQASFDHCDFP 280
Query: 297 ELLSPNNIATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATC 356
ELLSP+N+A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+C
Sbjct: 281 ELLSPSNVAVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASC 340
Query: 357 LNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALE 416
L +L ++ DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD+NKM+VAFNTT+ ALE
Sbjct: 341 LKMLDEMKDNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMNKMAVAFNTTVAALE 400
Query: 417 NELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIK 476
+EL LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+++
Sbjct: 401 DELTQLILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMGKEFQRRAKAMILRAAVLR 460
Query: 477 HNICVK 482
+ I VK
Sbjct: 461 NQIHVK 466
Score = 497 (180.0 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 95/132 (71%), Positives = 107/132 (81%)
Query: 691 YLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESI 750
+L G +PD G + P P LD E+ KKA +KLEKLD DLKNYK NSIKESI
Sbjct: 105 FLEVQG-VPDAVPEGAVEP---PPLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESI 160
Query: 751 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSY 810
RRGHDDLGDHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSY
Sbjct: 161 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSY 220
Query: 811 VNKAEATPDFAE 822
V+KAE+TP+ AE
Sbjct: 221 VSKAESTPEIAE 232
Score = 243 (90.6 bits), Expect = 1.2e-36, Sum P(3) = 1.2e-36
Identities = 46/64 (71%), Positives = 54/64 (84%)
Query: 540 KVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 599
K AAG AELA+RKYK AA+ FLQA FD+CDFPELLSP+N+A YGGLCALATFDR EL++
Sbjct: 249 KCAAGKAELASRKYKPAAKCFLQASFDHCDFPELLSPSNVAVYGGLCALATFDRQELQRN 308
Query: 600 DLES 603
+ S
Sbjct: 309 VISS 312
Score = 238 (88.8 bits), Expect = 6.9e-18, Sum P(2) = 6.9e-18
Identities = 51/97 (52%), Positives = 66/97 (68%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 300 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 359
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD+NKM+VAFNTT+
Sbjct: 360 HVRTLYTQIRNRALIQYFSPYVSADMNKMAVAFNTTV 396
Score = 217 (81.4 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 50/114 (43%), Positives = 76/114 (66%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLA-----QIMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + +N +A + ALE+EL LIL+G I ARIDSH+KIL
Sbjct: 364 LYTQIRNRALIQYFSPYVSADMNKMAVAFNTTVAALEDELTQLILEGLINARIDSHSKIL 423
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEM 939
YA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+
Sbjct: 424 YARDVDQRSTTFEKSLQMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGEL 477
Score = 194 (73.4 bits), Expect = 9.5e-12, P = 9.5e-12
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 406 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLQMGKEFQRRAKAMILRAAVLRNQIHV 465
Query: 63 K 63
K
Sbjct: 466 K 466
Score = 178 (67.7 bits), Expect = 3.1e-83, Sum P(3) = 3.1e-83
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA+SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 43 DLEQYASSYSGLMRIERLQFIADHCPQLRVEALKMALSFVQRTFNVDVYEEIHR 96
Score = 140 (54.3 bits), Expect = 3.7e-75, Sum P(3) = 3.7e-75
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 309 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 357
Score = 59 (25.8 bits), Expect = 3.1e-140, Sum P(2) = 3.1e-140
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 75 LKMALSFVQRTFNVDVYEEIHR 96
>FB|FBgn0027057 [details] [associations]
symbol:CSN1b "COP9 complex homolog subunit 1 b" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 EMBL:AE014296 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
GO:GO:0000338 eggNOG:COG5187 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
EMBL:AF129080 EMBL:AY051972 RefSeq:NP_524152.2 UniGene:Dm.2527
ProteinModelPortal:Q9VVU5 STRING:Q9VVU5 PaxDb:Q9VVU5 PRIDE:Q9VVU5
EnsemblMetazoa:FBtr0075074 GeneID:40063 KEGG:dme:Dmel_CG3889
CTD:40063 FlyBase:FBgn0027057 InParanoid:Q9VVU5 OrthoDB:EOG4PVMDW
PhylomeDB:Q9VVU5 GenomeRNAi:40063 NextBio:816813 Bgee:Q9VVU5
GermOnline:CG3889 GO:GO:0019781 Uniprot:Q9VVU5
Length = 525
Score = 1313 (467.3 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 249/365 (68%), Positives = 307/365 (84%)
Query: 122 LNSTGALPDVASSGNMGP---QDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKE 178
L A P + G P +D D ++TK KKAA+KLEKLD+DLKNYKSNSIKE
Sbjct: 132 LPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKE 191
Query: 179 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVL 238
SIRRGHDDL DHYL CGDL+NALKCYSRARDYCT+GKHVV+MCLNVI+VS+YLQNW+HV+
Sbjct: 192 SIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVM 251
Query: 239 SYVNKAEATPDFAEG-KDNNQAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPE 297
SY++KAE+TPDFAEG K+ N V T+L+ AAGLAEL +KYK AA+ FL A+FD+CDFPE
Sbjct: 252 SYISKAESTPDFAEGSKEANAQVHTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPE 311
Query: 298 LLSPNNIATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCL 357
++S +N+A YGGLCALATFDR EL++ VI S+ FKLFLELEPQLRDI+ +FY SKYA+CL
Sbjct: 312 MISTSNVAVYGGLCALATFDRQELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCL 371
Query: 358 NLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALEN 417
LL +I DNLL+DMYIAPHV TLYT+IRNRALIQYFSPY+SAD++KM++AFN+++ LEN
Sbjct: 372 TLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLEN 431
Query: 418 ELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKH 477
E+M LILDGQIQARIDSHNKIL+AK+ DQR++TFE++L +GK+Y R + ML+LR+AM+K
Sbjct: 432 EVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMGKQYQRHTRMLVLRAAMLKS 491
Query: 478 NICVK 482
+I VK
Sbjct: 492 HIHVK 496
Score = 495 (179.3 bits), Expect = 4.2e-98, Sum P(4) = 4.2e-98
Identities = 93/134 (69%), Positives = 109/134 (81%)
Query: 692 LNSTGALPDVASSGNMGP---QDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKE 748
L A P + G P +D D ++TK KKAA+KLEKLD+DLKNYKSNSIKE
Sbjct: 132 LPDIAAQPVAQAQGQAQPAVEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKE 191
Query: 749 SIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVL 808
SIRRGHDDL DHYL CGDL+NALKCYSRARDYCT+GKHVV+MCLNVI+VS+YLQNW+HV+
Sbjct: 192 SIRRGHDDLADHYLSCGDLTNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVM 251
Query: 809 SYVNKAEATPDFAE 822
SY++KAE+TPDFAE
Sbjct: 252 SYISKAESTPDFAE 265
Score = 230 (86.0 bits), Expect = 4.2e-98, Sum P(4) = 4.2e-98
Identities = 51/110 (46%), Positives = 75/110 (68%)
Query: 850 KYATCLNLLAQIMALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKE 909
K A N + + LENE+M LILDGQIQARIDSHNKIL+AK+ DQR++TFE++L +GK+
Sbjct: 417 KMAMAFN--SSVGDLENEVMQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMGKQ 474
Query: 910 YARKSNMLILRSAM-QVDVHM-----EDNDNNEQEMIIVENASLSPTISR 953
Y R + ML+LR+AM + +H+ E N+ E+ + +S + ++R
Sbjct: 475 YQRHTRMLVLRAAMLKSHIHVKSISREGGSNHGAELCVSAGSSTTAQLAR 524
Score = 228 (85.3 bits), Expect = 1.4e-47, Sum P(4) = 1.4e-47
Identities = 43/68 (63%), Positives = 54/68 (79%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
Q HTR + AAGLAEL +KYK AA+ FL A+FD+CDFPE++S +N+A YGGLCALAT
Sbjct: 273 QVHTR---LECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGLCALAT 329
Query: 591 FDRSELEK 598
FDR EL++
Sbjct: 330 FDRQELKR 337
Score = 216 (81.1 bits), Expect = 4.3e-14, P = 4.3e-14
Identities = 42/63 (66%), Positives = 55/63 (87%)
Query: 1 MTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNI 60
M LILDGQIQARIDSHNKIL+AK+ DQR++TFE++L +GK+Y R + ML+LR+AM+K +I
Sbjct: 434 MQLILDGQIQARIDSHNKILFAKEADQRNSTFERALIMGKQYQRHTRMLVLRAAMLKSHI 493
Query: 61 CVK 63
VK
Sbjct: 494 HVK 496
Score = 213 (80.0 bits), Expect = 1.6e-35, Sum P(3) = 1.6e-35
Identities = 37/50 (74%), Positives = 49/50 (98%)
Query: 481 VKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
++DNLL+DMYIAPHV TLYT+IRNRALIQYFSPY+SAD++KM++AFN+++
Sbjct: 377 IRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSV 426
Score = 185 (70.2 bits), Expect = 4.2e-98, Sum P(4) = 4.2e-98
Identities = 37/54 (68%), Positives = 40/54 (74%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YAN Y G+ RL RLIYVAD CP L EAL+MAI YV TYNVNLY LH+
Sbjct: 44 DLEVYANQYAGIVRLHRLIYVADVCPVLAVEALKMAITYVQTTYNVNLYQVLHK 97
Score = 142 (55.0 bits), Expect = 4.2e-98, Sum P(4) = 4.2e-98
Identities = 28/39 (71%), Positives = 33/39 (84%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQI 861
VI S+ FKLFLELEPQLRDI+ +FY SKYA+CL LL +I
Sbjct: 339 VIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEI 377
Score = 69 (29.3 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K++I YV TYNVNLY LH+
Sbjct: 76 LKMAITYVQTTYNVNLYQVLHK 97
Score = 45 (20.9 bits), Expect = 1.0e-65, Sum P(3) = 1.0e-65
Identities = 39/174 (22%), Positives = 68/174 (39%)
Query: 815 EATPDFAEVIFS---SGFKLFLELEPQLRD-ILVQFYNSKYATCL------NLLAQI--- 861
E P ++IF S + L L ++RD +LV Y + + T L L Q
Sbjct: 350 ELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKIRNRALIQYFSP 409
Query: 862 -MALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILR 920
M+ + M + + + + +++ Q R + K L KE A + N R
Sbjct: 410 YMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKIL-FAKE-ADQRNSTFER 467
Query: 921 SAMQVDVHMEDNDNNEQEMIIVENASLSP-----TISRSDENGRGSEMSVATGS 969
+ + M M+++ A L +ISR + G+E+ V+ GS
Sbjct: 468 ALI-----MGKQYQRHTRMLVLRAAMLKSHIHVKSISREGGSNHGAELCVSAGS 516
>UNIPROTKB|F1NB10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00580463 PRIDE:F1NB10 Ensembl:ENSGALT00000004462
ArrayExpress:F1NB10 Uniprot:F1NB10
Length = 487
Score = 1310 (466.2 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 253/358 (70%), Positives = 299/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 109 PDAVPDSGIEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 165
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 166 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 225
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 226 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 285
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 286 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 345
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+ ALE+EL LIL
Sbjct: 346 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLIL 405
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 406 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 463
Score = 494 (179.0 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 109 PDAVPDSGIEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 165
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 166 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 225
Query: 819 DFAE 822
+ AE
Sbjct: 226 EIAE 229
Score = 246 (91.7 bits), Expect = 1.6e-36, Sum P(3) = 1.6e-36
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 237 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 296
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 297 FDRQELQRNVISS 309
Score = 229 (85.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 297 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 356
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+
Sbjct: 357 HVRTLYTQIRNRALIQYFSPYVSADMHKMATAFNTTV 393
Score = 212 (79.7 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 54/127 (42%), Positives = 78/127 (61%)
Query: 835 LEPQLRD-ILVQFYNS-------KYATCLNLLAQIMALENELMTLILDGQIQARIDSHNK 886
L Q+R+ L+Q+++ K AT N + ALE+EL LIL+G I ARIDSH+K
Sbjct: 361 LYTQIRNRALIQYFSPYVSADMHKMATAFN--TTVAALEDELTQLILEGLINARIDSHSK 418
Query: 887 ILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVE 943
ILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+
Sbjct: 419 ILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPAN 478
Query: 944 NASLSPT 950
+ S T
Sbjct: 479 SQSRMST 485
Score = 191 (72.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 403 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 462
Query: 63 K 63
K
Sbjct: 463 K 463
Score = 178 (67.7 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA+SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 43 DLEQYASSYSGLMRIERLQFIADHCPQLRVEALKMALSFVQRTFNVDVYEEIHR 96
Score = 140 (54.3 bits), Expect = 7.9e-75, Sum P(3) = 7.9e-75
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 306 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 354
Score = 59 (25.8 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 75 LKMALSFVQRTFNVDVYEEIHR 96
>UNIPROTKB|F1NJQ7 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00818730 Ensembl:ENSGALT00000038889 OMA:SHERARS
ArrayExpress:F1NJQ7 Uniprot:F1NJQ7
Length = 491
Score = 1310 (466.2 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 253/358 (70%), Positives = 299/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 113 PDAVPDSGIEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 169
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 170 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 229
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 230 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 289
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 290 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 349
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+ ALE+EL LIL
Sbjct: 350 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLIL 409
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 410 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 467
Score = 494 (179.0 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 113 PDAVPDSGIEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 169
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 170 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 229
Query: 819 DFAE 822
+ AE
Sbjct: 230 EIAE 233
Score = 246 (91.7 bits), Expect = 1.7e-36, Sum P(3) = 1.7e-36
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 241 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 300
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 301 FDRQELQRNVISS 313
Score = 229 (85.7 bits), Expect = 7.2e-17, Sum P(2) = 7.2e-17
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 301 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 360
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+
Sbjct: 361 HVRTLYTQIRNRALIQYFSPYVSADMHKMATAFNTTV 397
Score = 212 (79.7 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 54/127 (42%), Positives = 78/127 (61%)
Query: 835 LEPQLRD-ILVQFYNS-------KYATCLNLLAQIMALENELMTLILDGQIQARIDSHNK 886
L Q+R+ L+Q+++ K AT N + ALE+EL LIL+G I ARIDSH+K
Sbjct: 365 LYTQIRNRALIQYFSPYVSADMHKMATAFN--TTVAALEDELTQLILEGLINARIDSHSK 422
Query: 887 ILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVE 943
ILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+
Sbjct: 423 ILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPAN 482
Query: 944 NASLSPT 950
+ S T
Sbjct: 483 SQSRMST 489
Score = 191 (72.3 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 407 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 466
Query: 63 K 63
K
Sbjct: 467 K 467
Score = 178 (67.7 bits), Expect = 2.2e-82, Sum P(3) = 2.2e-82
Identities = 31/54 (57%), Positives = 45/54 (83%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA+SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 47 DLEQYASSYSGLMRIERLQFIADHCPQLRVEALKMALSFVQRTFNVDVYEEIHR 100
Score = 140 (54.3 bits), Expect = 7.9e-75, Sum P(3) = 7.9e-75
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 310 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 358
Score = 59 (25.8 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 79 LKMALSFVQRTFNVDVYEEIHR 100
>MGI|MGI:2384801 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008180 "signalosome" evidence=ISO;IDA]
[GO:0010388 "cullin deneddylation" evidence=ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 MGI:MGI:2384801
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 EMBL:AL663090 GO:GO:0010388
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOVERGEN:HBG030722
EMBL:AK088490 EMBL:BC003350 IPI:IPI00116793 IPI:IPI00480341
UniGene:Mm.30195 ProteinModelPortal:Q99LD4 STRING:Q99LD4
PhosphoSite:Q99LD4 PaxDb:Q99LD4 PRIDE:Q99LD4 NextBio:372621
Bgee:Q99LD4 CleanEx:MM_GPS1 Genevestigator:Q99LD4
GermOnline:ENSMUSG00000025156 Uniprot:Q99LD4
Length = 471
Score = 1309 (465.8 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 253/358 (70%), Positives = 299/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 210 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 269
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 270 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 329
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+ ALE+EL LIL
Sbjct: 330 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLIL 389
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 390 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 447
Score = 493 (178.6 bits), Expect = 5.2e-81, Sum P(3) = 5.2e-81
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 819 DFAE 822
+ AE
Sbjct: 210 EIAE 213
Score = 246 (91.7 bits), Expect = 1.5e-36, Sum P(3) = 1.5e-36
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 221 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 280
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 281 FDRQELQRNVISS 293
Score = 229 (85.7 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 281 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 340
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+
Sbjct: 341 HVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTV 377
Score = 210 (79.0 bits), Expect = 5.2e-81, Sum P(3) = 5.2e-81
Identities = 51/125 (40%), Positives = 79/125 (63%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + ++ +A + ALE+EL LIL+G I ARIDSH+KIL
Sbjct: 345 LYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKIL 404
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVENA 945
YA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+ +
Sbjct: 405 YARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQ 464
Query: 946 SLSPT 950
S T
Sbjct: 465 SRMST 469
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 387 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 446
Query: 63 K 63
K
Sbjct: 447 K 447
Score = 168 (64.2 bits), Expect = 5.2e-81, Sum P(3) = 5.2e-81
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++AD CP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADRCPPLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 140 (54.3 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 290 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 338
Score = 60 (26.2 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>UNIPROTKB|F1P996 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 EMBL:AAEX03006161
Ensembl:ENSCAFT00000009593 Uniprot:F1P996
Length = 433
Score = 1309 (465.8 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 253/358 (70%), Positives = 299/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 55 PDTIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 111
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 112 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 171
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 172 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 231
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 232 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 291
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+ ALE+EL LIL
Sbjct: 292 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLIL 351
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 352 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 409
Score = 493 (178.6 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 55 PDTIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 111
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 112 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 171
Query: 819 DFAE 822
+ AE
Sbjct: 172 EIAE 175
Score = 246 (91.7 bits), Expect = 5.7e-37, Sum P(3) = 5.7e-37
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 183 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 242
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 243 FDRQELQRNVISS 255
Score = 229 (85.7 bits), Expect = 2.6e-17, Sum P(2) = 2.6e-17
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 243 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 302
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+
Sbjct: 303 HVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTV 339
Score = 210 (79.0 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 51/125 (40%), Positives = 79/125 (63%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + ++ +A + ALE+EL LIL+G I ARIDSH+KIL
Sbjct: 307 LYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINARIDSHSKIL 366
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVENA 945
YA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+ +
Sbjct: 367 YARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQ 426
Query: 946 SLSPT 950
S T
Sbjct: 427 SRMST 431
Score = 191 (72.3 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 349 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 408
Query: 63 K 63
K
Sbjct: 409 K 409
Score = 140 (54.3 bits), Expect = 8.6e-70, Sum P(3) = 8.6e-70
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 252 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 300
Score = 131 (51.2 bits), Expect = 3.9e-77, Sum P(3) = 3.9e-77
Identities = 22/41 (53%), Positives = 34/41 (82%)
Query: 613 RLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 2 RIERLQFIADHCPPLRVEALKMALSFVQRTFNVDMYEEIHR 42
Score = 60 (26.2 bits), Expect = 1.1e-137, Sum P(2) = 1.1e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 21 LKMALSFVQRTFNVDMYEEIHR 42
>UNIPROTKB|F1MP10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:DAAA02049401
IPI:IPI00867147 Ensembl:ENSBTAT00000025728 ArrayExpress:F1MP10
Uniprot:F1MP10
Length = 478
Score = 1307 (465.1 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 253/358 (70%), Positives = 297/358 (82%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 100 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 156
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 157 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 216
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 217 EIAEQRGERDTQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 276
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 277 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 336
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD+ KM+ AFNTT+ ALE+EL LIL
Sbjct: 337 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMRKMATAFNTTVAALEDELTQLIL 396
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 397 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 454
Score = 493 (178.6 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 100 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 156
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 157 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 216
Query: 819 DFAE 822
+ AE
Sbjct: 217 EIAE 220
Score = 246 (91.7 bits), Expect = 1.1e-36, Sum P(3) = 1.1e-36
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 228 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 287
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 288 FDRQELQRNVISS 300
Score = 228 (85.3 bits), Expect = 6.3e-17, Sum P(2) = 6.3e-17
Identities = 49/97 (50%), Positives = 64/97 (65%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 288 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 347
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD+ KM+ AFNTT+
Sbjct: 348 HVRTLYTQIRNRALIQYFSPYVSADMRKMATAFNTTV 384
Score = 212 (79.7 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 54/127 (42%), Positives = 78/127 (61%)
Query: 835 LEPQLRD-ILVQFYNS-------KYATCLNLLAQIMALENELMTLILDGQIQARIDSHNK 886
L Q+R+ L+Q+++ K AT N + ALE+EL LIL+G I ARIDSH+K
Sbjct: 352 LYTQIRNRALIQYFSPYVSADMRKMATAFN--TTVAALEDELTQLILEGLINARIDSHSK 409
Query: 887 ILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVE 943
ILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+
Sbjct: 410 ILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPAN 469
Query: 944 NASLSPT 950
+ S T
Sbjct: 470 SQSRMST 476
Score = 191 (72.3 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 38/61 (62%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 394 LILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 453
Query: 63 K 63
K
Sbjct: 454 K 454
Score = 176 (67.0 bits), Expect = 4.6e-82, Sum P(3) = 4.6e-82
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 34 DLEQYAASYSGLMRIERLQFIADHCPPLRVEALKMALSFVQRTFNVDMYEEIHR 87
Score = 140 (54.3 bits), Expect = 1.7e-74, Sum P(3) = 1.7e-74
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 297 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 345
Score = 60 (26.2 bits), Expect = 1.7e-137, Sum P(2) = 1.7e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 66 LKMALSFVQRTFNVDMYEEIHR 87
>RGD|621532 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
RGD:621532 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 CTD:2873 HOVERGEN:HBG030722 EMBL:X87885 EMBL:BC061746
IPI:IPI00208644 PIR:S57449 RefSeq:NP_001257868.1 RefSeq:NP_446421.3
UniGene:Rn.16873 PhosphoSite:P97834 PRIDE:P97834 GeneID:117039
KEGG:rno:117039 NextBio:619843 Genevestigator:P97834 Uniprot:P97834
Length = 471
Score = 1306 (464.8 bits), Expect = 2.2e-137, Sum P(2) = 2.2e-137
Identities = 252/358 (70%), Positives = 299/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+
Sbjct: 210 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNV 269
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 270 AVYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 329
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+ ALE+EL +IL
Sbjct: 330 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVIL 389
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I VK
Sbjct: 390 EGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVK 447
Score = 493 (178.6 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 819 DFAE 822
+ AE
Sbjct: 210 EIAE 213
Score = 246 (91.7 bits), Expect = 3.1e-36, Sum P(3) = 3.1e-36
Identities = 48/73 (65%), Positives = 55/73 (75%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ FL A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 221 QTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALAT 280
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 281 FDRQELQRNVISS 293
Score = 229 (85.7 bits), Expect = 4.5e-17, Sum P(2) = 4.5e-17
Identities = 49/97 (50%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 281 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 340
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD++KM+ AFNTT+
Sbjct: 341 HVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTV 377
Score = 207 (77.9 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 50/125 (40%), Positives = 79/125 (63%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + ++ +A + ALE+EL +IL+G I ARIDSH+KIL
Sbjct: 345 LYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINARIDSHSKIL 404
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVENA 945
YA+ DQRSTTFEKSL +GKE+ R++ +ILR+A+ Q+ V + ++ E+ +
Sbjct: 405 YARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGELTPANSQ 464
Query: 946 SLSPT 950
S T
Sbjct: 465 SRMST 469
Score = 188 (71.2 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 37/61 (60%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
+IL+G I ARIDSH+KILYA+ DQRSTTFEKSL +GKE+ R++ +ILR+A++++ I V
Sbjct: 387 VILEGLINARIDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMILRAAVLRNQIHV 446
Query: 63 K 63
K
Sbjct: 447 K 447
Score = 168 (64.2 bits), Expect = 1.1e-80, Sum P(3) = 1.1e-80
Identities = 30/54 (55%), Positives = 43/54 (79%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++AD CP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADRCPPLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 140 (54.3 bits), Expect = 1.1e-73, Sum P(3) = 1.1e-73
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 290 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 338
Score = 60 (26.2 bits), Expect = 2.2e-137, Sum P(2) = 2.2e-137
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>UNIPROTKB|C9JFE4 [details] [associations]
symbol:GPS1 "G protein pathway suppressor 1, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:CH471099 HOGENOM:HOG000091977
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 IPI:IPI00300386
UniGene:Hs.268530 HGNC:HGNC:4549 ChiTaRS:GPS1 STRING:C9JFE4
Ensembl:ENST00000320548 OrthoDB:EOG469QTM Uniprot:C9JFE4
Length = 471
Score = 1296 (461.3 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 249/358 (69%), Positives = 298/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ L A FD+CDFPELLSP+N+
Sbjct: 210 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNV 269
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 270 AIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 329
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD+++M+ AFNTT+ ALE+EL LIL
Sbjct: 330 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLIL 389
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I AR+DSH+KILYA+ DQRSTTFEKSL +GKE+ R++ ++LR+A++++ I VK
Sbjct: 390 EGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVK 447
Score = 494 (179.0 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 819 DFAE 822
+ AE
Sbjct: 210 EIAE 213
Score = 239 (89.2 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ L A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 221 QTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALAT 280
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 281 FDRQELQRNVISS 293
Score = 226 (84.6 bits), Expect = 9.8e-17, Sum P(2) = 9.8e-17
Identities = 48/97 (49%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 281 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 340
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD+++M+ AFNTT+
Sbjct: 341 HVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTV 377
Score = 206 (77.6 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 49/125 (39%), Positives = 79/125 (63%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + ++ +A + ALE+EL LIL+G I AR+DSH+KIL
Sbjct: 345 LYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKIL 404
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVENA 945
YA+ DQRSTTFEKSL +GKE+ R++ ++LR+A+ Q+ V + ++ E+ +
Sbjct: 405 YARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQ 464
Query: 946 SLSPT 950
S T
Sbjct: 465 SRMST 469
Score = 187 (70.9 bits), Expect = 5.1e-11, P = 5.1e-11
Identities = 36/61 (59%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I AR+DSH+KILYA+ DQRSTTFEKSL +GKE+ R++ ++LR+A++++ I V
Sbjct: 387 LILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHV 446
Query: 63 K 63
K
Sbjct: 447 K 447
Score = 177 (67.4 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 140 (54.3 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 290 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 338
Score = 60 (26.2 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>UNIPROTKB|Q13098 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IDA] [GO:0010388 "cullin
deneddylation" evidence=IDA] [GO:0000188 "inactivation of MAPK
activity" evidence=TAS] [GO:0005095 "GTPase inhibitor activity"
evidence=TAS] [GO:0007049 "cell cycle" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0000188
GO:GO:0007254 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049
GO:GO:0005095 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
eggNOG:COG5187 HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 EMBL:U20285 EMBL:AK093283
EMBL:AC135056 EMBL:BC000155 EMBL:BC064503 EMBL:BT009834
IPI:IPI00156282 IPI:IPI00300386 IPI:IPI00414289 IPI:IPI00921488
PIR:G01646 RefSeq:NP_004118.3 RefSeq:NP_997657.1 UniGene:Hs.268530
ProteinModelPortal:Q13098 DIP:DIP-42077N IntAct:Q13098
MINT:MINT-1203964 STRING:Q13098 PhosphoSite:Q13098 DMDM:223590263
PaxDb:Q13098 PRIDE:Q13098 DNASU:2873 Ensembl:ENST00000306823
Ensembl:ENST00000355130 Ensembl:ENST00000392358
Ensembl:ENST00000578552 GeneID:2873 KEGG:hsa:2873 UCSC:uc002kdk.1
UCSC:uc002kdl.1 UCSC:uc002kdm.1 CTD:2873 GeneCards:GC17P080009
HGNC:HGNC:4549 MIM:601934 neXtProt:NX_Q13098 PharmGKB:PA28944
HOVERGEN:HBG030722 ChiTaRS:GPS1 GenomeRNAi:2873 NextBio:11339
ArrayExpress:Q13098 Bgee:Q13098 CleanEx:HS_GPS1
Genevestigator:Q13098 GermOnline:ENSG00000169727 Uniprot:Q13098
Length = 491
Score = 1296 (461.3 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 249/358 (69%), Positives = 298/358 (83%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 113 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 169
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 170 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 229
Query: 249 DFAE--G-KDNN-QAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNI 304
+ AE G +D+ QA+ TKLK AAGLAELA RKYK AA+ L A FD+CDFPELLSP+N+
Sbjct: 230 EIAEQRGERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNV 289
Query: 305 ATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIM 364
A YGGLCALATFDR EL++ VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++
Sbjct: 290 AIYGGLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK 349
Query: 365 DNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLIL 424
DNLLLDMY+APHV TLYTQIRNRALIQYFSPY+SAD+++M+ AFNTT+ ALE+EL LIL
Sbjct: 350 DNLLLDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLIL 409
Query: 425 DGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK 482
+G I AR+DSH+KILYA+ DQRSTTFEKSL +GKE+ R++ ++LR+A++++ I VK
Sbjct: 410 EGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVK 467
Score = 494 (179.0 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 113 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 169
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 170 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 229
Query: 819 DFAE 822
+ AE
Sbjct: 230 EIAE 233
Score = 239 (89.2 bits), Expect = 3.9e-35, Sum P(3) = 3.9e-35
Identities = 47/73 (64%), Positives = 54/73 (73%)
Query: 531 QTHTRTNDFKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALAT 590
QT K AAGLAELA RKYK AA+ L A FD+CDFPELLSP+N+A YGGLCALAT
Sbjct: 241 QTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGLCALAT 300
Query: 591 FDRSELEKQDLES 603
FDR EL++ + S
Sbjct: 301 FDRQELQRNVISS 313
Score = 226 (84.6 bits), Expect = 1.2e-16, Sum P(2) = 1.2e-16
Identities = 48/97 (49%), Positives = 65/97 (67%)
Query: 440 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVK------DNLLLDMYIAP 493
+ +Q+ QR+ S + E + +I + K+ C+K DNLLLDMY+AP
Sbjct: 301 FDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAP 360
Query: 494 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
HV TLYTQIRNRALIQYFSPY+SAD+++M+ AFNTT+
Sbjct: 361 HVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTV 397
Score = 206 (77.6 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 49/125 (39%), Positives = 79/125 (63%)
Query: 835 LEPQLRD-ILVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKIL 888
L Q+R+ L+Q+++ + ++ +A + ALE+EL LIL+G I AR+DSH+KIL
Sbjct: 365 LYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISARVDSHSKIL 424
Query: 889 YAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM---QVDVHMEDNDNNEQEMIIVENA 945
YA+ DQRSTTFEKSL +GKE+ R++ ++LR+A+ Q+ V + ++ E+ +
Sbjct: 425 YARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHVKSPPREGSQGELTPANSQ 484
Query: 946 SLSPT 950
S T
Sbjct: 485 SRMST 489
Score = 187 (70.9 bits), Expect = 5.6e-11, P = 5.6e-11
Identities = 36/61 (59%), Positives = 51/61 (83%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICV 62
LIL+G I AR+DSH+KILYA+ DQRSTTFEKSL +GKE+ R++ ++LR+A++++ I V
Sbjct: 407 LILEGLISARVDSHSKILYARDVDQRSTTFEKSLLMGKEFQRRAKAMMLRAAVLRNQIHV 466
Query: 63 K 63
K
Sbjct: 467 K 467
Score = 177 (67.4 bits), Expect = 1.2e-81, Sum P(3) = 1.2e-81
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 43 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 96
Score = 140 (54.3 bits), Expect = 1.0e-74, Sum P(3) = 1.0e-74
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLIL 873
VI SS FKLFLELEPQ+RDI+ +FY SKYA+CL +L ++ +N L+ + L
Sbjct: 310 VISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMK--DNLLLDMYL 358
Score = 60 (26.2 bits), Expect = 2.5e-136, Sum P(2) = 2.5e-136
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 75 LKMALSFVQRTFNVDMYEEIHR 96
>DICTYBASE|DDB_G0283587 [details] [associations]
symbol:csn1 "COP9 signalosome complex subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0283587 GO:GO:0005737 GO:GO:0043161
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AAFI02000055 GO:GO:0008180 eggNOG:COG5187 KO:K12175
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602 EMBL:DQ309429
RefSeq:XP_639011.1 ProteinModelPortal:Q54QX3 STRING:Q54QX3
PRIDE:Q54QX3 EnsemblProtists:DDB0233099 GeneID:8624141
KEGG:ddi:DDB_G0283587 ProtClustDB:CLSZ2728967 Uniprot:Q54QX3
Length = 458
Score = 860 (307.8 bits), Expect = 5.4e-86, P = 5.4e-86
Identities = 170/341 (49%), Positives = 236/341 (69%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
LDP+ IE +KK +++L+KL+ DL KSN +K+SIR +DLG+ Y GD NALKC+
Sbjct: 92 LDPVYIENLSKKNSLQLDKLEQDLNTAKSNMVKDSIRFAQNDLGEFYYKIGDHQNALKCF 151
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
R RDYCT KHV+ MC N+I++ V QN++H SY+ KAE +PD DN KL
Sbjct: 152 IRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKAEQSPDL----DNVSNA--KL 205
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCD-FPELLSPNNIATYGGLCALATFDRSELEK 323
+ GL L +YK AAR F++ F+ + F +++SP +IA YGGLCALATFDR+EL+K
Sbjct: 206 RSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQDIAYYGGLCALATFDRNELKK 265
Query: 324 QVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQ 383
+VI FK +LEL P+LR+++ FYN+KY +CL L ++ LLLD+++ HV LY +
Sbjct: 266 KVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKPILLLDIHLYKHVEILYQR 325
Query: 384 IRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQ 443
IR++AL+QYFSPY S D+N M+ AFNTT+ LE E+ LI++ +IQARIDSHNK LYA++
Sbjct: 326 IRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQARIDSHNKRLYARK 385
Query: 444 QDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNICVKDN 484
DQR+TTFEK++ VG ++ SN L+LR M+ +NI N
Sbjct: 386 ADQRTTTFEKTVQVGSDFQNSSNSLLLRLEMLNNNISTVSN 426
Score = 299 (110.3 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 55/109 (50%), Positives = 75/109 (68%)
Query: 715 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 774
LDP+ IE +KK +++L+KL+ DL KSN +K+SIR +DLG+ Y GD NALKC+
Sbjct: 92 LDPVYIENLSKKNSLQLDKLEQDLNTAKSNMVKDSIRFAQNDLGEFYYKIGDHQNALKCF 151
Query: 775 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEV 823
R RDYCT KHV+ MC N+I++ V QN++H SY+ KAE +PD V
Sbjct: 152 IRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKAEQSPDLDNV 200
Score = 192 (72.6 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 843 LVQFYNSKYATCLNLLAQ-----IMALENELMTLILDGQIQARIDSHNKILYAKQQDQRS 897
LVQ+++ + +N++A + LE E+ LI++ +IQARIDSHNK LYA++ DQR+
Sbjct: 331 LVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQARIDSHNKRLYARKADQRT 390
Query: 898 TTFEKSLNVGKEYARKSNMLILRSAM 923
TTFEK++ VG ++ SN L+LR M
Sbjct: 391 TTFEKTVQVGSDFQNSSNSLLLRLEM 416
Score = 177 (67.4 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 33/58 (56%), Positives = 46/58 (79%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKHNI 60
LI++ +IQARIDSHNK LYA++ DQR+TTFEK++ VG ++ SN L+LR M+ +NI
Sbjct: 364 LIMENEIQARIDSHNKRLYARKADQRTTTFEKTVQVGSDFQNSSNSLLLRLEMLNNNI 421
Score = 149 (57.5 bits), Expect = 3.0e-22, Sum P(2) = 3.0e-22
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 544 GLAELATRKYKTAARFFLQAHFDYCD-FPELLSPNNIATYGGLCALATFDRSELEKQDLE 602
GL L +YK AAR F++ F+ + F +++SP +IA YGGLCALATFDR+EL+K+ ++
Sbjct: 210 GLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQDIAYYGGLCALATFDRNELKKKVID 269
Score = 149 (57.5 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 28/50 (56%), Positives = 39/50 (78%)
Query: 481 VKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
+K LLLD+++ HV LY +IR++AL+QYFSPY S D+N M+ AFNTT+
Sbjct: 305 MKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTV 354
Score = 127 (49.8 bits), Expect = 1.4e-48, Sum P(3) = 1.4e-48
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLY 648
DLE+Y N+Y+G ++ RLI++AD+C L EA MA++ V +T N+ LY
Sbjct: 31 DLETYINNYSGFTKIHRLIFIADNCKQLEVEAYNMALKEVQKTPNLELY 79
Score = 96 (38.9 bits), Expect = 1.4e-38, Sum P(3) = 1.4e-38
Identities = 25/70 (35%), Positives = 40/70 (57%)
Query: 822 EVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQARI 881
+VI FK +LEL P+LR+++ FYN+KY +CL L ++ + L+LD +
Sbjct: 266 KVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKPI------LLLD----IHL 315
Query: 882 DSHNKILYAK 891
H +ILY +
Sbjct: 316 YKHVEILYQR 325
Score = 56 (24.8 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
Identities = 30/114 (26%), Positives = 46/114 (40%)
Query: 471 RSAMIKHNICVKDNLLLDMY--IAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNT 528
+S M+K +I N L + Y I H N L IR R L+ N + + +T
Sbjct: 119 KSNMVKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDT 178
Query: 529 TIQTHT--------------RTNDFKVAA--GLAELATRKYKTAARFFLQAHFD 566
TH ++ K+ + GL L +YK AAR F++ F+
Sbjct: 179 QNYTHAPSYIAKAEQSPDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFE 232
>TAIR|locus:2098851 [details] [associations]
symbol:FUS6 "FUSCA 6" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008180 "signalosome" evidence=TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0000338
"protein deneddylation" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0009646 "response to absence of light"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000003 "reproduction" evidence=RCA]
[GO:0006325 "chromatin organization" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006461 GO:GO:0009651
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0006972
GO:GO:0009646 EMBL:AL137898 GO:GO:0009585 GO:GO:0008180
GO:GO:0010388 EMBL:L26498 EMBL:AF395057 EMBL:AF360295 EMBL:AK117532
EMBL:AY051056 EMBL:AJ243015 IPI:IPI00545799 PIR:T47906
RefSeq:NP_567109.1 UniGene:At.303 ProteinModelPortal:P45432
IntAct:P45432 STRING:P45432 PaxDb:P45432 PRIDE:P45432
EnsemblPlants:AT3G61140.1 GeneID:825286 KEGG:ath:AT3G61140
TAIR:At3g61140 eggNOG:COG5187 HOGENOM:HOG000091977
InParanoid:P45432 KO:K12175 OMA:CPPLRVE PhylomeDB:P45432
ProtClustDB:CLSN2689283 Genevestigator:P45432 GermOnline:AT3G61140
InterPro:IPR019585 Pfam:PF10602 Uniprot:P45432
Length = 441
Score = 847 (303.2 bits), Expect = 1.3e-84, P = 1.3e-84
Identities = 167/334 (50%), Positives = 234/334 (70%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
+D E +++A K KL+N+L +Y++N IKESIR G++D GD Y CG L +A K Y
Sbjct: 103 MDLAWCEAVDRRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNY 162
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
R RDYCT KH++ MC+N I VS+ + ++HV SYVNKAE P+ E N KL
Sbjct: 163 IRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLEPMVN-----AKL 217
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCD-FPELLSPNNIATYGGLCALATFDRSELEK 323
+ A+GLA L +KYK AAR FL + + + + E+++P +IATYGGLCALA+FDRSEL++
Sbjct: 218 RCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQ 277
Query: 324 QVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQ 383
+VI + F+ FLEL P +R+++ FY+S+YA+CL LA + NLLLD+++ HV+TLY Q
Sbjct: 278 KVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYDQ 337
Query: 384 IRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQ 443
IR +ALIQY P++S DL++M+ AF T++ LE EL LI D QIQARIDSHNKILYA+
Sbjct: 338 IRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYARH 397
Query: 444 QDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKH 477
DQR+ TF+K L +G E+ R ++LR+ ++KH
Sbjct: 398 ADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKH 431
Score = 279 (103.3 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 52/108 (48%), Positives = 72/108 (66%)
Query: 715 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 774
+D E +++A K KL+N+L +Y++N IKESIR G++D GD Y CG L +A K Y
Sbjct: 103 MDLAWCEAVDRRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNY 162
Query: 775 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAE 822
R RDYCT KH++ MC+N I VS+ + ++HV SYVNKAE P+ E
Sbjct: 163 IRTRDYCTTTKHIIHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETLE 210
Score = 172 (65.6 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 861 IMALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILR 920
+ LE EL LI D QIQARIDSHNKILYA+ DQR+ TF+K L +G E+ R ++LR
Sbjct: 366 VSGLEKELEALITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLR 425
Query: 921 S 921
+
Sbjct: 426 A 426
Score = 169 (64.5 bits), Expect = 4.1e-09, P = 4.1e-09
Identities = 32/56 (57%), Positives = 42/56 (75%)
Query: 3 LILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAMIKH 58
LI D QIQARIDSHNKILYA+ DQR+ TF+K L +G E+ R ++LR+ ++KH
Sbjct: 376 LITDNQIQARIDSHNKILYARHADQRNATFQKVLQMGNEFDRDVRAMLLRANLLKH 431
Score = 158 (60.7 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 540 KVAAGLAELATRKYKTAARFFLQAHFDYCD-FPELLSPNNIATYGGLCALATFDRSELEK 598
+ A+GLA L +KYK AAR FL + + + + E+++P +IATYGGLCALA+FDRSEL++
Sbjct: 218 RCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELKQ 277
Query: 599 QDLES 603
+ +++
Sbjct: 278 KVIDN 282
Score = 147 (56.8 bits), Expect = 6.1e-21, Sum P(3) = 6.1e-21
Identities = 27/59 (45%), Positives = 45/59 (76%)
Query: 472 SAMIKHNICVKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTI 530
++ +++ +K NLLLD+++ HV+TLY QIR +ALIQY P++S DL++M+ AF T++
Sbjct: 308 ASCLEYLASLKSNLLLDIHLHDHVDTLYDQIRKKALIQYTLPFVSVDLSRMADAFKTSV 366
Score = 103 (41.3 bits), Expect = 2.4e-34, Sum P(3) = 2.4e-34
Identities = 23/65 (35%), Positives = 38/65 (58%)
Query: 822 EVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQARI 881
+VI + F+ FLEL P +R+++ FY+S+YA+CL LA + + N L+ + L +
Sbjct: 278 KVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKS--NLLLDIHLHDHVDTLY 335
Query: 882 DSHNK 886
D K
Sbjct: 336 DQIRK 340
Score = 102 (41.0 bits), Expect = 1.6e-41, Sum P(3) = 1.6e-41
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 597 EKQDLESYANSYTGLARLFRLIYVADHCP---ALRHEALRMAIQYVMQTYNVNLY 648
E D+E+YA Y G ++ RL+++A+HC AL+ +ALRMA + + N L+
Sbjct: 32 EPLDIEAYAALYKGRTKIMRLLFIANHCGGNHALQFDALRMAYDEIKKGENTQLF 86
Score = 53 (23.7 bits), Expect = 6.1e-21, Sum P(3) = 6.1e-21
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 129 PDVASSGN--MGPQDIPTLDPLLIETKNKKAAMKLEKLDN-DLKNYKS--NSIKESIRRG 183
P++ +S N + PQDI T L ++ +K + +DN + +N+ ++E I
Sbjct: 243 PELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELI--- 299
Query: 184 HDDLGDHYLDCGDLSNALK 202
+D Y C + +LK
Sbjct: 300 NDFYSSRYASCLEYLASLK 318
Score = 53 (23.7 bits), Expect = 2.5e-16, Sum P(3) = 2.5e-16
Identities = 20/79 (25%), Positives = 37/79 (46%)
Query: 699 PDVASSGN--MGPQDIPTLDPLLIETKNKKAAMKLEKLDN-DLKNYKS--NSIKESIRRG 753
P++ +S N + PQDI T L ++ +K + +DN + +N+ ++E I
Sbjct: 243 PELGNSYNEVIAPQDIATYGGLCALASFDRSELKQKVIDNINFRNFLELVPDVRELI--- 299
Query: 754 HDDLGDHYLDCGDLSNALK 772
+D Y C + +LK
Sbjct: 300 NDFYSSRYASCLEYLASLK 318
>UNIPROTKB|J3KSA5 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 HGNC:HGNC:4549
ChiTaRS:GPS1 Ensembl:ENST00000585084 Uniprot:J3KSA5
Length = 210
Score = 485 (175.8 bits), Expect = 3.1e-61, Sum P(2) = 3.1e-61
Identities = 90/121 (74%), Positives = 100/121 (82%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 758
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 759 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 818
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 819 D 819
+
Sbjct: 210 E 210
Score = 485 (175.8 bits), Expect = 6.3e-49, Sum P(2) = 6.3e-49
Identities = 90/121 (74%), Positives = 100/121 (82%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLG 188
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKESIRRGHDDLG
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLG 149
Query: 189 DHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATP 248
DHYLDCGDLSNALKCYSRARDYCT+ KHV++MCLNVI+VSVYLQNWSHVLSYV+KAE+TP
Sbjct: 150 DHYLDCGDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTP 209
Query: 249 D 249
+
Sbjct: 210 E 210
Score = 177 (67.4 bits), Expect = 3.1e-61, Sum P(2) = 3.1e-61
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 60 (26.2 bits), Expect = 6.3e-49, Sum P(2) = 6.3e-49
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>ASPGD|ASPL0000047276 [details] [associations]
symbol:csnA species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0090329 "regulation of DNA-dependent
DNA replication" evidence=IEA] [GO:0060625 "regulation of protein
deneddylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0051445 "regulation of meiotic cell cycle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 EMBL:AACD01000022
HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 eggNOG:NOG325807 EMBL:AY574249 RefSeq:XP_659095.1
STRING:Q5BD89 EnsemblFungi:CADANIAT00008114 GeneID:2874595
KEGG:ani:AN1491.2 OrthoDB:EOG4GTPP1 Uniprot:Q5BD89
Length = 498
Score = 584 (210.6 bits), Expect = 4.5e-56, P = 4.5e-56
Identities = 137/375 (36%), Positives = 215/375 (57%)
Query: 121 YLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESI 180
YL + AL DVA + P+ T+D +E K + ++L+++L+ YK+N IKESI
Sbjct: 101 YLRAVQALADVAPNE---PE--ATIDSDWVERSQKVVKAETDRLEHELRGYKNNLIKESI 155
Query: 181 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSY 240
R G+++LG HY GDL++A K YSR RD+CT H+ M +I V++ +W +V S
Sbjct: 156 RMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSN 215
Query: 241 VNKAEATPDFAEGKDNNQAVFT-KLKVAAGLAELATRKYKTAARFFLQAHFDYCD-FPEL 298
V++ + GK QA K+ A GL++L + Y AA F+ D F E+
Sbjct: 216 VHRLRSQG----GKPEEQAKHQPKISAAMGLSQLHSGSYLEAANSFIATDPSLGDTFNEV 271
Query: 299 LSPNNIATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLN 358
L+ N++A YGGLCALA+ DR+EL+++V+ +S F+ FLELEP +R + F NSK+ CL
Sbjct: 272 LTSNDVAVYGGLCALASMDRNELQRRVLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLE 331
Query: 359 LLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAF---NTTIQAL 415
+L + LLD+++ HV LY +IR +++ QY P+ L M+ F N T Q+
Sbjct: 332 ILEAYRADYLLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQSS 391
Query: 416 EN--------ELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNM 467
++ EL++LI DG + ARID +L + Q D+R E L+ Y R++++
Sbjct: 392 QSDSKSAFVQELISLIQDGTLDARIDLEKHVLVSTQGDKRIEVQEAVLDSLDNYVREAHL 451
Query: 468 LILRSAMIKHNICVK 482
+LRS +I+ + V+
Sbjct: 452 RLLRSNIIRAGLEVR 466
Score = 233 (87.1 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 48/123 (39%), Positives = 75/123 (60%)
Query: 691 YLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESI 750
YL + AL DVA + P+ T+D +E K + ++L+++L+ YK+N IKESI
Sbjct: 101 YLRAVQALADVAPNE---PE--ATIDSDWVERSQKVVKAETDRLEHELRGYKNNLIKESI 155
Query: 751 RRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSY 810
R G+++LG HY GDL++A K YSR RD+CT H+ M +I V++ +W +V S
Sbjct: 156 RMGNEELGQHYHRIGDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSN 215
Query: 811 VNK 813
V++
Sbjct: 216 VHR 218
Score = 127 (49.8 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 35/113 (30%), Positives = 62/113 (54%)
Query: 542 AAGLAELATRKYKTAARFFLQAHFDYCD-FPELLSPNNIATYGGLCALATFDRSELEKQD 600
A GL++L + Y AA F+ D F E+L+ N++A YGGLCALA+ DR+EL+++
Sbjct: 239 AMGLSQLHSGSYLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCALASMDRNELQRRV 298
Query: 601 LESYA-NSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLH 652
L++ + ++ L R ++ C + L + Y Y +++++Q H
Sbjct: 299 LDNSSFRNFLELEPHIRRA-ISFFCNSKFRPCLEILEAY-RADYLLDIHLQRH 349
Score = 93 (37.8 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 863 ALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRS 921
A EL++LI DG + ARID +L + Q D+R E L+ Y R++++ +LRS
Sbjct: 398 AFVQELISLIQDGTLDARIDLEKHVLVSTQGDKRIEVQEAVLDSLDNYVREAHLRLLRS 456
Score = 86 (35.3 bits), Expect = 6.7e-23, Sum P(3) = 6.7e-23
Identities = 21/56 (37%), Positives = 32/56 (57%)
Query: 823 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQ 878
V+ +S F+ FLELEP +R + F NSK+ CL +L A + L+ + L +Q
Sbjct: 298 VLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLEILEAYRA--DYLLDIHLQRHVQ 351
Score = 81 (33.6 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 486 LLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAF---NTTIQT 532
LLD+++ HV LY +IR +++ QY P+ L M+ F N T Q+
Sbjct: 341 LLDIHLQRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQS 390
Score = 69 (29.3 bits), Expect = 1.3e-23, Sum P(3) = 1.3e-23
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 595 ELEKQDLESYANSYTGLARLFRLIYVADHCPA-LRHEALRMAIQYVMQTYNVNLYIQ 650
E K +LESY +YTG R RL Y+ C + L +AL+ AI +V Y++
Sbjct: 48 EAPKFELESYIANYTGRTRFNRL-YLIGTCSSYLAVDALKAAIAEAKSGKDVARYLR 103
>FB|FBgn0028838 [details] [associations]
symbol:CSN1a "COP9 complex homolog subunit 1 a" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS;NAS] EMBL:AE014134
GO:GO:0008180 InterPro:IPR019585 Pfam:PF10602 eggNOG:NOG325807
GeneTree:ENSGT00510000046608 OMA:MFRNLIR EMBL:BT022388
RefSeq:NP_609720.1 UniGene:Dm.12169 IntAct:Q9VJR9 MINT:MINT-332295
STRING:Q9VJR9 EnsemblMetazoa:FBtr0080671 GeneID:34857
KEGG:dme:Dmel_CG4697 UCSC:CG4697-RA CTD:34857 FlyBase:FBgn0028838
InParanoid:Q9VJR9 OrthoDB:EOG4TB2SR GenomeRNAi:34857 NextBio:790568
Uniprot:Q9VJR9
Length = 364
Score = 515 (186.3 bits), Expect = 5.2e-56, Sum P(3) = 5.2e-56
Identities = 109/277 (39%), Positives = 172/277 (62%)
Query: 114 NQLNFSFYLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKS 173
NQ + L++TG SSG G +P D +E +A + L++LD +L KS
Sbjct: 75 NQSKGNEELHTTGGSEPSTSSGR-GRVVVP-YDSYWVEDNIMEATLMLQELDAELNFKKS 132
Query: 174 NSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQN 233
NS +RR +++GDH+ G+L A+K Y+RAR YCT+ ++V++M N+IRVS+Y++N
Sbjct: 133 NSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMEN 192
Query: 234 WSHVLSYVNKAEATPDFAEGKDN-NQAVFTKLKVAAGLAELATRKYKTAARFFLQAHFDY 292
W HVL+Y+++A+ +A G +N Q V +L AGLA L + YK+AA++FL +
Sbjct: 193 WWHVLTYIDEAK---QYAYGFENLAQEVPARLSCVAGLAHLGLKIYKSAAQYFLSTPYGR 249
Query: 293 CDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSK 352
D+ ++++P ++ Y GLCALATFDR L+ I S FK F +L P++ IL +FY +
Sbjct: 250 YDYDKIVAPEDVTLYAGLCALATFDRETLQLNAINSEAFKPFFQLSPKMWTILAKFYAGE 309
Query: 353 YATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRAL 389
+ C+ LL +I +++ LD+Y++PHV+ LY I R L
Sbjct: 310 FDACMTLLREIENHVRLDVYLSPHVSALYDLIMARML 346
Score = 243 (90.6 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 52/132 (39%), Positives = 84/132 (63%)
Query: 684 NQLNFSFYLNSTGALPDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKS 743
NQ + L++TG SSG G +P D +E +A + L++LD +L KS
Sbjct: 75 NQSKGNEELHTTGGSEPSTSSGR-GRVVVP-YDSYWVEDNIMEATLMLQELDAELNFKKS 132
Query: 744 NSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQN 803
NS +RR +++GDH+ G+L A+K Y+RAR YCT+ ++V++M N+IRVS+Y++N
Sbjct: 133 NSGSSYVRRILEEIGDHHEKSGNLQMAVKFYARARPYCTSSENVINMFRNLIRVSIYMEN 192
Query: 804 WSHVLSYVNKAE 815
W HVL+Y+++A+
Sbjct: 193 WWHVLTYIDEAK 204
Score = 143 (55.4 bits), Expect = 2.6e-11, Sum P(3) = 2.6e-11
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 543 AGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQDLE 602
AGLA L + YK+AA++FL + D+ ++++P ++ Y GLCALATFDR L+ +
Sbjct: 225 AGLAHLGLKIYKSAAQYFLSTPYGRYDYDKIVAPEDVTLYAGLCALATFDRETLQLNAIN 284
Query: 603 SYA 605
S A
Sbjct: 285 SEA 287
Score = 127 (49.8 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 592 DRSELEKQDLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQL 651
D E L SYA+ YT + RL RL ++A CP L AL +A+ +V TYNV LY +L
Sbjct: 2 DNGEETMLHLPSYADRYTDIPRLIRLKFIAQVCPELSVLALELALNHVKTTYNVKLYDEL 61
Query: 652 HR 653
++
Sbjct: 62 YK 63
Score = 80 (33.2 bits), Expect = 1.8e-31, Sum P(3) = 1.8e-31
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 824 IFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENEL-MTLILDGQIQARID 882
I S FK F +L P++ IL +FY ++ C+ LL +I EN + + + L + A D
Sbjct: 283 INSEAFKPFFQLSPKMWTILAKFYAGEFDACMTLLREI---ENHVRLDVYLSPHVSALYD 339
Score = 63 (27.2 bits), Expect = 5.2e-56, Sum P(3) = 5.2e-56
Identities = 11/27 (40%), Positives = 20/27 (74%)
Query: 481 VKDNLLLDMYIAPHVNTLYTQIRNRAL 507
+++++ LD+Y++PHV+ LY I R L
Sbjct: 320 IENHVRLDVYLSPHVSALYDLIMARML 346
Score = 53 (23.7 bits), Expect = 5.2e-56, Sum P(3) = 5.2e-56
Identities = 8/24 (33%), Positives = 18/24 (75%)
Query: 60 ICVKISIQYVMQTYNVNLYIQLHR 83
+ +++++ +V TYNV LY +L++
Sbjct: 40 LALELALNHVKTTYNVKLYDELYK 63
>POMBASE|SPBC215.03c [details] [associations]
symbol:csn1 "COP9/signalosome complex subunit Csn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] [GO:0030163 "protein catabolic process" evidence=IGI]
[GO:0051445 "regulation of meiotic cell cycle" evidence=IMP]
[GO:0060625 "regulation of protein deneddylation" evidence=IMP]
[GO:0090329 "regulation of DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPBC215.03c GO:GO:0005829 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CU329671_GR GO:GO:0006974
GO:GO:0030163 GO:GO:0008180 GO:GO:0051445 GO:GO:0010388 KO:K12175
InterPro:IPR019585 Pfam:PF10602 eggNOG:NOG325807 OrthoDB:EOG4GTPP1
EMBL:AF314169 EMBL:AB027783 PIR:T39893 RefSeq:NP_596680.1
IntAct:O94308 STRING:O94308 EnsemblFungi:SPBC215.03c.1
GeneID:2540352 KEGG:spo:SPBC215.03c OMA:MFRNLIR NextBio:20801480
GO:GO:0090329 GO:GO:0060625 Uniprot:O94308
Length = 422
Score = 423 (154.0 bits), Expect = 1.2e-38, P = 1.2e-38
Identities = 99/328 (30%), Positives = 171/328 (52%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
LD +E+ LE+L +LK YK+N I+ESIR DL + D G +AL+ Y
Sbjct: 76 LDVEWVESVTFHRKQNLEQLRRELKAYKNNLIRESIRAAQLDLASFFADVGQFDSALRSY 135
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
++ R+YCTN + + L ++R+S+++ N+SHVL++ ++A++T A + + +
Sbjct: 136 AKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAA------MELTSPI 189
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 324
GLA Y+ A FL+ D D +++ +I+ Y LCALA +D L ++
Sbjct: 190 YAYCGLANFCLGDYEEALAHFLKVETDTSD--GIITKTDISVYISLCALACWDHKRLIQE 247
Query: 325 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQI 384
+ + F +L+P LR L N KY+ L+ L Q + LDMY+AP + L++ I
Sbjct: 248 LERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLI 307
Query: 385 RNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQ 444
R R+L+ Y PY + +K++V F+ +E L+ +I ++ ++DS K +Y +
Sbjct: 308 RERSLLDYLIPYSALPFSKIAVDFHIDENFIEKNLLEIIEAKKLNGKVDSLQKRVYIEPS 367
Query: 445 DQRSTTFEKSLNVGKEYARKSNMLILRS 472
+ FE N+ + S L L++
Sbjct: 368 SEPEN-FEDIKNIAQTSLLYSKALYLQT 394
Score = 204 (76.9 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 38/103 (36%), Positives = 65/103 (63%)
Query: 715 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 774
LD +E+ LE+L +LK YK+N I+ESIR DL + D G +AL+ Y
Sbjct: 76 LDVEWVESVTFHRKQNLEQLRRELKAYKNNLIRESIRAAQLDLASFFADVGQFDSALRSY 135
Query: 775 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEAT 817
++ R+YCTN + + L ++R+S+++ N+SHVL++ ++A++T
Sbjct: 136 AKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKST 178
Score = 77 (32.2 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 596 LEKQDLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQ-TYNVNLYIQL 651
+ +++L+ Y + Y +++FR ++VA + LR + AI+ + + TYN+ LY L
Sbjct: 7 VNQEELKRYLDEYGVWSKIFRALFVARNSKPLRSFCVHYAIKELKEKTYNLELYQSL 63
Score = 51 (23.0 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 14/70 (20%), Positives = 32/70 (45%)
Query: 864 LENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTFEKSLNVGKEYARKSNMLILRSAM 923
+E L+ +I ++ ++DS K +Y + + FE N+ + S L L++
Sbjct: 338 IEKNLLEIIEAKKLNGKVDSLQKRVYIEPSSEPEN-FEDIKNIAQTSLLYSKALYLQTLA 396
Query: 924 QVDVHMEDND 933
++ D++
Sbjct: 397 AMNTENTDDE 406
Score = 48 (22.0 bits), Expect = 1.7e-18, Sum P(4) = 1.7e-18
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 829 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQ 860
F +L+P LR L N KY+ L+ L Q
Sbjct: 254 FNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQ 285
Score = 38 (18.4 bits), Expect = 4.9e-16, Sum P(3) = 4.9e-16
Identities = 21/85 (24%), Positives = 39/85 (45%)
Query: 866 NELMTLILDGQIQARIDSHNKILYAKQQ--DQRSTTFEKSLNVGKEYARKSNMLILRSAM 923
N +L+LD +Q ++ +Y Q + S E+SL +Y + L S +
Sbjct: 273 NRKYSLLLD-TLQQNAQDYSLDMYLAPQLTNLFSLIRERSL---LDYLIPYSALPF-SKI 327
Query: 924 QVDVHMEDNDNNEQEMIIVENASLS 948
VD H+++N + + I+E L+
Sbjct: 328 AVDFHIDENFIEKNLLEIIEAKKLN 352
>WB|WBGene00000813 [details] [associations]
symbol:csn-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0009792 GO:GO:0005737 GO:GO:0030154
GO:GO:0048477 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910
GO:GO:0040035 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 EMBL:AL132895 RefSeq:NP_507507.1
ProteinModelPortal:Q9GS00 DIP:DIP-26112N IntAct:Q9GS00
MINT:MINT-1040684 STRING:Q9GS00 PaxDb:Q9GS00
EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2 GeneID:180168
KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168 WormBase:Y59A8A.1
eggNOG:NOG325807 GeneTree:ENSGT00510000046608 HOGENOM:HOG000017865
InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304 Uniprot:Q9GS00
Length = 601
Score = 237 (88.5 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 63/229 (27%), Positives = 117/229 (51%)
Query: 256 NNQAVFTKL-KVAAG--LAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCA 312
N Q + T L K A L +L ++Y LQ + ++ +++ YG L A
Sbjct: 307 NRQLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSA 366
Query: 313 LATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMY 372
+AT R++L+ QV + F+ LE EPQL ++L + +S++ C ++ + LLLD +
Sbjct: 367 MATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLDPF 426
Query: 373 IAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARI 432
I+ +V+ L+ +IR + ++QY PY + + M+ A + L+ L+ LI + +I
Sbjct: 427 ISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKI 486
Query: 433 DSHNKILYAKQQDQRS-TTFEKSLNVGKEYA-RKSNMLILRSAMIKHNI 479
D + I+ + D+R K +NV + A +K+ L+ ++ + NI
Sbjct: 487 DQNEGIV--RILDERDENAILKRVNVTCDRATQKAKSLLWKTTLAGANI 533
Score = 174 (66.3 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 142 IPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNAL 201
IP D IE ++L + K +K +KES RR +DL HY+ G + A+
Sbjct: 159 IPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAI 218
Query: 202 KCYSRA-RDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKA-EATPDFAEGKDNNQ 258
+ YSR RDYCT KH ++M +N + V++ +W + + N A + D + + N+Q
Sbjct: 219 RLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTAYRSLKDADDAEKNSQ 277
Score = 168 (64.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 712 IPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNAL 771
IP D IE ++L + K +K +KES RR +DL HY+ G + A+
Sbjct: 159 IPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAI 218
Query: 772 KCYSRA-RDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKA 814
+ YSR RDYCT KH ++M +N + V++ +W + + N A
Sbjct: 219 RLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTA 262
Score = 86 (35.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 481 VKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVA 525
VK LLLD +I+ +V+ L+ +IR + ++QY PY + + M+ A
Sbjct: 417 VKPRLLLDPFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEA 461
Score = 82 (33.9 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQ-TYNVNLYI 649
D+ES A SY A R ++A HCP LR +A I Y+ + T ++ Y+
Sbjct: 85 DIESLACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYV 135
Score = 62 (26.9 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 829 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQARID 882
F+ LE EPQL ++L + +S++ C ++ + L+LD I +D
Sbjct: 385 FRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKP------RLLLDPFISRNVD 432
Score = 61 (26.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 545 LAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 599
L +L ++Y LQ + ++ +++ YG L A+AT R++L+ Q
Sbjct: 324 LLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSAMATMSRADLKLQ 378
>UNIPROTKB|Q9GS00 [details] [associations]
symbol:csn-1 "COP9 signalosome complex subunit 1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
GO:GO:0009792 GO:GO:0005737 GO:GO:0030154 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000910 GO:GO:0040035
GO:GO:0008180 KO:K12175 InterPro:IPR019585 Pfam:PF10602
EMBL:AL132895 RefSeq:NP_507507.1 ProteinModelPortal:Q9GS00
DIP:DIP-26112N IntAct:Q9GS00 MINT:MINT-1040684 STRING:Q9GS00
PaxDb:Q9GS00 EnsemblMetazoa:Y59A8A.1.1 EnsemblMetazoa:Y59A8A.1.2
GeneID:180168 KEGG:cel:CELE_Y59A8A.1 UCSC:Y59A8A.1 CTD:180168
WormBase:Y59A8A.1 eggNOG:NOG325807 GeneTree:ENSGT00510000046608
HOGENOM:HOG000017865 InParanoid:Q9GS00 OMA:RAMEDLF NextBio:908304
Uniprot:Q9GS00
Length = 601
Score = 237 (88.5 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 63/229 (27%), Positives = 117/229 (51%)
Query: 256 NNQAVFTKL-KVAAG--LAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCA 312
N Q + T L K A L +L ++Y LQ + ++ +++ YG L A
Sbjct: 307 NRQLIETALAKCLAAQVLLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSA 366
Query: 313 LATFDRSELEKQVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMY 372
+AT R++L+ QV + F+ LE EPQL ++L + +S++ C ++ + LLLD +
Sbjct: 367 MATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKPRLLLDPF 426
Query: 373 IAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARI 432
I+ +V+ L+ +IR + ++QY PY + + M+ A + L+ L+ LI + +I
Sbjct: 427 ISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQKHVSLKI 486
Query: 433 DSHNKILYAKQQDQRS-TTFEKSLNVGKEYA-RKSNMLILRSAMIKHNI 479
D + I+ + D+R K +NV + A +K+ L+ ++ + NI
Sbjct: 487 DQNEGIV--RILDERDENAILKRVNVTCDRATQKAKSLLWKTTLAGANI 533
Score = 174 (66.3 bits), Expect = 2.4e-29, Sum P(2) = 2.4e-29
Identities = 38/119 (31%), Positives = 61/119 (51%)
Query: 142 IPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNAL 201
IP D IE ++L + K +K +KES RR +DL HY+ G + A+
Sbjct: 159 IPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAI 218
Query: 202 KCYSRA-RDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKA-EATPDFAEGKDNNQ 258
+ YSR RDYCT KH ++M +N + V++ +W + + N A + D + + N+Q
Sbjct: 219 RLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTAYRSLKDADDAEKNSQ 277
Score = 168 (64.2 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 35/104 (33%), Positives = 54/104 (51%)
Query: 712 IPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNAL 771
IP D IE ++L + K +K +KES RR +DL HY+ G + A+
Sbjct: 159 IPLRDQKWIEENGATWQSTTDQLQAEYKRHKDEGVKESTRRAMEDLFQHYMMAGKIDEAI 218
Query: 772 KCYSRA-RDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKA 814
+ YSR RDYCT KH ++M +N + V++ +W + + N A
Sbjct: 219 RLYSRGIRDYCTQLKHSINMWINWMEVAICANDWGKLDTVTNTA 262
Score = 86 (35.3 bits), Expect = 2.9e-13, Sum P(2) = 2.9e-13
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 481 VKDNLLLDMYIAPHVNTLYTQIRNRALIQYFSPYLSADLNKMSVA 525
VK LLLD +I+ +V+ L+ +IR + ++QY PY + + M+ A
Sbjct: 417 VKPRLLLDPFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEA 461
Score = 82 (33.9 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQ-TYNVNLYI 649
D+ES A SY A R ++A HCP LR +A I Y+ + T ++ Y+
Sbjct: 85 DIESLACSYDSNAFFLRARFIARHCPILRADAYISLINYLKEHTTDITHYV 135
Score = 62 (26.9 bits), Expect = 4.8e-14, Sum P(3) = 4.8e-14
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 829 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMALENELMTLILDGQIQARID 882
F+ LE EPQL ++L + +S++ C ++ + L+LD I +D
Sbjct: 385 FRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKP------RLLLDPFISRNVD 432
Score = 61 (26.5 bits), Expect = 1.5e-12, Sum P(3) = 1.5e-12
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 545 LAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 599
L +L ++Y LQ + ++ +++ YG L A+AT R++L+ Q
Sbjct: 324 LLKLRNKRYSQVVETILQIKTECLQSKWFVTSSDLGIYGMLSAMATMSRADLKLQ 378
>UNIPROTKB|J3KTB0 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 HGNC:HGNC:4549
ChiTaRS:GPS1 Ensembl:ENST00000581418 Uniprot:J3KTB0
Length = 139
Score = 177 (67.4 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 125 (49.1 bits), Expect = 1.1e-22, Sum P(2) = 1.1e-22
Identities = 27/50 (54%), Positives = 30/50 (60%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKE 748
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKE
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE 139
Score = 125 (49.1 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 27/50 (54%), Positives = 30/50 (60%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKE 178
PD + P P LD +E KKA +KLEKLD DLKNYK NSIKE
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKE 139
Score = 60 (26.2 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>UNIPROTKB|Q6UV22 [details] [associations]
symbol:PSMD6 "KIAA0107 isoform" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 HOVERGEN:HBG023924
OrthoDB:EOG4DV5MB UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564
ChiTaRS:PSMD6 EMBL:AY359879 IPI:IPI00794383 RefSeq:NP_001258709.1
STRING:Q6UV22 Ensembl:ENST00000394431 UCSC:uc003dmd.1
Uniprot:Q6UV22
Length = 351
Score = 262 (97.3 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 75/307 (24%), Positives = 139/307 (45%)
Query: 153 KNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 211
K KKA +L++LD +L++ + N + IR ++ GD AL + + D
Sbjct: 34 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT 93
Query: 212 TNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLA 271
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 94 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGLY 149
Query: 272 ELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGF 331
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 150 CVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEI 208
Query: 332 KLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQ 391
L P +R L Y +Y+ LA + + D APH ++R A Q
Sbjct: 209 LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQ 268
Query: 392 YFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y S L M+ AF ++ ++ EL I G++ +ID N+I+ + D ++ +
Sbjct: 269 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQY 328
Query: 452 EKSLNVG 458
++++ G
Sbjct: 329 QETIKKG 335
>UNIPROTKB|F1N903 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 OMA:YTVYVCM EMBL:AADN02014237
IPI:IPI00601017 Ensembl:ENSGALT00000011836 Uniprot:F1N903
Length = 398
Score = 274 (101.5 bits), Expect = 3.1e-21, P = 3.1e-21
Identities = 76/314 (24%), Positives = 142/314 (45%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
+D L+ K +L++LDN+L++ + + IR ++ GD AL +
Sbjct: 74 IDTELLNKMKKANEEELKRLDNELEDAEKILGESEIRDAMMAKAEYLCRIGDKEGALTAF 133
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
+ D H +D+ ++R+ ++ + + + KA++ + EG D ++ +L
Sbjct: 134 RKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNIEKAKSLIE--EGGDWDRR--NRL 189
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 324
KV GL +A R +K AA FL + + EL+ TY ++ DR +L ++
Sbjct: 190 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALDRPDLREK 248
Query: 325 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQI 384
VI + L P +R L Y +YA LA + + D APH ++
Sbjct: 249 VIKGAEILEVLHSLPAVRQYLFSLYECRYAAFFQSLAIVEQEMKKDWLFAPHYRYYVREM 308
Query: 385 RNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQ 444
R A Q Y S L M+ AF +++ ++ EL I G++ +ID N+I+ +
Sbjct: 309 RIHAYSQLLESYRSLTLGYMAEAFGVSVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 368
Query: 445 DQRSTTFEKSLNVG 458
D ++ +++++ G
Sbjct: 369 DSKNWQYQETIKKG 382
>RGD|735127 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 RGD:735127 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOGENOM:HOG000214998
KO:K03037 OMA:YTVYVCM CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:CH474010 EMBL:BC059159 IPI:IPI00189463 RefSeq:NP_942025.1
UniGene:Rn.103875 IntAct:Q6PCT9 STRING:Q6PCT9
Ensembl:ENSRNOT00000009249 GeneID:289924 KEGG:rno:289924
InParanoid:Q6PCT9 NextBio:630485 Genevestigator:Q6PCT9
Uniprot:Q6PCT9
Length = 389
Score = 266 (98.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 75/308 (24%), Positives = 140/308 (45%)
Query: 152 TKNKKA-AMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDY 210
+K KKA +L++LD +L++ + N + IR ++ GD AL + + D
Sbjct: 71 SKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDK 130
Query: 211 CTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGL 270
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGL 186
Query: 271 AELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSG 330
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 187 YCVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAE 245
Query: 331 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALI 390
L P +R L Y +Y+ LA + + D APH ++R A
Sbjct: 246 ILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYS 305
Query: 391 QYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTT 450
Q Y S L M+ AF ++ ++ EL I G++ +ID N+I+ + D ++
Sbjct: 306 QLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQ 365
Query: 451 FEKSLNVG 458
+++++ G
Sbjct: 366 YQETIKKG 373
>UNIPROTKB|J3QS88 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC135056 HGNC:HGNC:4549 ChiTaRS:GPS1 Ensembl:ENST00000582327
Uniprot:J3QS88
Length = 134
Score = 177 (67.4 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 27 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 80
Score = 101 (40.6 bits), Expect = 3.6e-20, Sum P(2) = 3.6e-20
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 699 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYK 742
PD + P P LD +E KKA +KLEKLD DLKNYK
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYK 133
Score = 101 (40.6 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 22/44 (50%), Positives = 25/44 (56%)
Query: 129 PDVASSGNMGPQDIPTLDPLLIETKNKKAAMKLEKLDNDLKNYK 172
PD + P P LD +E KKA +KLEKLD DLKNYK
Sbjct: 93 PDAIPESGVEP---PALDTAWVEATRKKALLKLEKLDTDLKNYK 133
Score = 60 (26.2 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 8/22 (36%), Positives = 19/22 (86%)
Query: 62 VKISIQYVMQTYNVNLYIQLHR 83
+K+++ +V +T+NV++Y ++HR
Sbjct: 59 LKMALSFVQRTFNVDMYEEIHR 80
>UNIPROTKB|F1MXE4 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
OMA:YTVYVCM IPI:IPI00697833 UniGene:Bt.3193 EMBL:DAAA02054147
Ensembl:ENSBTAT00000020108 Uniprot:F1MXE4
Length = 389
Score = 263 (97.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 75/307 (24%), Positives = 139/307 (45%)
Query: 153 KNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 211
K KKA +L++LD +L++ + N + IR ++ GD AL + R D
Sbjct: 72 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRRTYDKT 131
Query: 212 TNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLA 271
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 132 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGLY 187
Query: 272 ELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGF 331
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 188 CVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEI 246
Query: 332 KLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQ 391
L P +R L Y +Y+ LA + + D APH ++R A Q
Sbjct: 247 LEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQ 306
Query: 392 YFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y S L M+ AF ++ ++ EL I G++ +ID N+++ + D ++ +
Sbjct: 307 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKNWQY 366
Query: 452 EKSLNVG 458
++++ G
Sbjct: 367 QETIKKG 373
>UNIPROTKB|Q3T0B2 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 EMBL:BC102468 IPI:IPI00697833 RefSeq:NP_001029821.1
UniGene:Bt.3193 ProteinModelPortal:Q3T0B2 STRING:Q3T0B2
PRIDE:Q3T0B2 GeneID:538625 KEGG:bta:538625 CTD:9861
HOVERGEN:HBG023924 InParanoid:Q3T0B2 OrthoDB:EOG4DV5MB
NextBio:20877481 Uniprot:Q3T0B2
Length = 389
Score = 263 (97.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 75/307 (24%), Positives = 139/307 (45%)
Query: 153 KNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 211
K KKA +L++LD +L++ + N + IR ++ GD AL + R D
Sbjct: 72 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRRTYDKT 131
Query: 212 TNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLA 271
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 132 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGLY 187
Query: 272 ELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGF 331
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 188 CVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEI 246
Query: 332 KLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQ 391
L P +R L Y +Y+ LA + + D APH ++R A Q
Sbjct: 247 LEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYSQ 306
Query: 392 YFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y S L M+ AF ++ ++ EL I G++ +ID N+++ + D ++ +
Sbjct: 307 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKNWQY 366
Query: 452 EKSLNVG 458
++++ G
Sbjct: 367 QETIKKG 373
>MGI|MGI:1913663 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1913663 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
GO:GO:0022624 HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM CTD:9861
HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:AJ252147 EMBL:AK010287
EMBL:BC006869 IPI:IPI00319965 RefSeq:NP_079826.2 UniGene:Mm.27591
ProteinModelPortal:Q99JI4 IntAct:Q99JI4 STRING:Q99JI4
PhosphoSite:Q99JI4 PaxDb:Q99JI4 PRIDE:Q99JI4 DNASU:66413
Ensembl:ENSMUST00000022256 GeneID:66413 KEGG:mmu:66413
UCSC:uc007sgj.1 InParanoid:Q99JI4 NextBio:321623 Bgee:Q99JI4
Genevestigator:Q99JI4 GermOnline:ENSMUSG00000021737 Uniprot:Q99JI4
Length = 389
Score = 263 (97.6 bits), Expect = 5.6e-20, P = 5.6e-20
Identities = 75/308 (24%), Positives = 139/308 (45%)
Query: 152 TKNKKA-AMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDY 210
+K KKA +L++LD +L++ + N + IR ++ GD AL + + D
Sbjct: 71 SKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTAFRKTYDK 130
Query: 211 CTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGL 270
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 131 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGL 186
Query: 271 AELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSG 330
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 187 YCVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAE 245
Query: 331 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALI 390
L P +R L Y +Y+ LA + + D APH ++R A
Sbjct: 246 ILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHAYS 305
Query: 391 QYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTT 450
Q Y S L M+ AF + ++ EL I G++ +ID N+I+ + D ++
Sbjct: 306 QLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQ 365
Query: 451 FEKSLNVG 458
+++++ G
Sbjct: 366 YQETIKKG 373
>UNIPROTKB|Q15008 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0016887 "ATPase activity" evidence=NAS] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=NAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 EMBL:CH471055 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:AF215935 EMBL:AF530062 EMBL:AY568086 EMBL:D14663 EMBL:AK290205
EMBL:BC000630 EMBL:BC000904 EMBL:BC012369 IPI:IPI00014151
RefSeq:NP_055629.1 UniGene:Hs.152536 ProteinModelPortal:Q15008
DIP:DIP-27590N IntAct:Q15008 MINT:MINT-5004632 STRING:Q15008
PhosphoSite:Q15008 DMDM:2494625 PaxDb:Q15008 PRIDE:Q15008
Ensembl:ENST00000295901 GeneID:9861 KEGG:hsa:9861 UCSC:uc003dlz.1
GeneCards:GC03M063973 HGNC:HGNC:9564 HPA:HPA036922
neXtProt:NX_Q15008 PharmGKB:PA33910 InParanoid:Q15008
PhylomeDB:Q15008 ChiTaRS:PSMD6 GenomeRNAi:9861 NextBio:37172
ArrayExpress:Q15008 Bgee:Q15008 CleanEx:HS_PSMD6
Genevestigator:Q15008 GermOnline:ENSG00000163636 Uniprot:Q15008
Length = 389
Score = 262 (97.3 bits), Expect = 7.4e-20, P = 7.4e-20
Identities = 75/307 (24%), Positives = 139/307 (45%)
Query: 153 KNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 211
K KKA +L++LD +L++ + N + IR ++ GD AL + + D
Sbjct: 72 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT 131
Query: 212 TNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLA 271
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 132 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGLY 187
Query: 272 ELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGF 331
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 188 CVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEI 246
Query: 332 KLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQ 391
L P +R L Y +Y+ LA + + D APH ++R A Q
Sbjct: 247 LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQ 306
Query: 392 YFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y S L M+ AF ++ ++ EL I G++ +ID N+I+ + D ++ +
Sbjct: 307 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQY 366
Query: 452 EKSLNVG 458
++++ G
Sbjct: 367 QETIKKG 373
>UNIPROTKB|C9IZE4 [details] [associations]
symbol:PSMD6 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 6, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 OMA:YTVYVCM OrthoDB:EOG4DV5MB
UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564 ChiTaRS:PSMD6
IPI:IPI00793381 RefSeq:NP_001258708.1 STRING:C9IZE4
Ensembl:ENST00000492933 UCSC:uc003dmb.1 Uniprot:C9IZE4
Length = 442
Score = 262 (97.3 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 75/307 (24%), Positives = 139/307 (45%)
Query: 153 KNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYC 211
K KKA +L++LD +L++ + N + IR ++ GD AL + + D
Sbjct: 125 KMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTAFRKTYDKT 184
Query: 212 TNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLA 271
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 185 VALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGLY 240
Query: 272 ELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSGF 331
+A R +K AA FL + + EL+ TY ++ +R +L ++VI +
Sbjct: 241 CVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREKVIKGAEI 299
Query: 332 KLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALIQ 391
L P +R L Y +Y+ LA + + D APH ++R A Q
Sbjct: 300 LEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHAYSQ 359
Query: 392 YFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y S L M+ AF ++ ++ EL I G++ +ID N+I+ + D ++ +
Sbjct: 360 LLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQY 419
Query: 452 EKSLNVG 458
++++ G
Sbjct: 420 QETIKKG 426
>ZFIN|ZDB-GENE-040426-1038 [details] [associations]
symbol:psmd6 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 6" species:7955 "Danio rerio" [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0070306 "lens fiber cell differentiation"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1038 GO:GO:0043161 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0070306 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:BC049452
EMBL:BC153637 IPI:IPI00501573 RefSeq:NP_956585.1 UniGene:Dr.84195
STRING:Q7ZWE5 GeneID:393261 KEGG:dre:393261 InParanoid:Q7ZWE5
NextBio:20814320 Uniprot:Q7ZWE5
Length = 386
Score = 258 (95.9 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 75/308 (24%), Positives = 140/308 (45%)
Query: 152 TKNKKAAM-KLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDY 210
+K KKA +L++LD+ L++ + N + IR ++ + GD AL + + D
Sbjct: 68 SKMKKANEDELKRLDDVLEDAEKNLGESEIRDAMMAKAEYLIRIGDKEGALTAFRKTYDK 127
Query: 211 CTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGL 270
H +D+ ++R+ ++ + + KA++ + EG D ++ +LKV GL
Sbjct: 128 TVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRLKVYQGL 183
Query: 271 AELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSG 330
+A R +K AA FL + + EL+ TY + R +L ++VI +
Sbjct: 184 YCVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVCMIALKRPDLREKVIKGAE 242
Query: 331 FKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQIRNRALI 390
L P +R L Y +Y+ LA++ + D APH ++R A
Sbjct: 243 ILEVLHSLPAVRQYLFSLYECRYSVFFQSLARVEQEMKQDWLFAPHYRYYVREMRILAYS 302
Query: 391 QYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTT 450
Q Y S L M+ AF + + ++ EL I G++ +ID N+I+ + D ++
Sbjct: 303 QLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKNWQ 362
Query: 451 FEKSLNVG 458
+++++ G
Sbjct: 363 YQETIKKG 370
>UNIPROTKB|E2RN00 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AAEX03012146
Ensembl:ENSCAFT00000011009 OMA:HRARESH NextBio:20858788
Uniprot:E2RN00
Length = 516
Score = 264 (98.0 bits), Expect = 2.2e-19, P = 2.2e-19
Identities = 75/314 (23%), Positives = 140/314 (44%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
LD L+ K +L++LD +L++ + N + IR ++ GD AL +
Sbjct: 192 LDTDLLNKMRKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRVGDKDGALTAF 251
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
+ D H +D+ ++R+ ++ + + KA++ + EG D ++ +L
Sbjct: 252 RKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE--EGGDWDRR--NRL 307
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 324
KV GL +A R +K AA FL + + EL+ TY ++ +R +L ++
Sbjct: 308 KVYQGLYCVAIRDFKQAAELFLDTVSTFTSY-ELMDYKTFVTYTVYVSMIALERPDLREK 366
Query: 325 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQI 384
VI + L P +R L Y +Y+ LA + + D APH ++
Sbjct: 367 VIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREM 426
Query: 385 RNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQ 444
R A Q Y S L M+ AF ++ ++ EL I G++ +ID N+I+ +
Sbjct: 427 RIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRP 486
Query: 445 DQRSTTFEKSLNVG 458
D ++ +++++ G
Sbjct: 487 DSKNWQYQETIKKG 500
>DICTYBASE|DDB_G0270188 [details] [associations]
symbol:psmD6 "26S proteasome non-ATPase regulatory
subunit 6" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0270188 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0006511 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 KO:K03037 OMA:YTVYVCM
RefSeq:XP_646606.1 ProteinModelPortal:Q55C75 STRING:Q55C75
PRIDE:Q55C75 EnsemblProtists:DDB0232985 GeneID:8617578
KEGG:ddi:DDB_G0270188 ProtClustDB:CLSZ2444089 Uniprot:Q55C75
Length = 382
Score = 256 (95.2 bits), Expect = 3.4e-19, P = 3.4e-19
Identities = 73/315 (23%), Positives = 141/315 (44%)
Query: 144 TLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKC 203
T D L+ + +L+ LDN + + N + IR + D Y GD A++
Sbjct: 57 TEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAYLAKSDFYCRIGDKDTAVEM 116
Query: 204 YSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTK 263
Y + + +D+ +IR+ ++ + V + KA++ + EG D ++ +
Sbjct: 117 YRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKAQSLVE--EGGDWDRK--NR 172
Query: 264 LKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEK 323
LK + +++ R++K A+ +L+ + E + + Y +L DR L++
Sbjct: 173 LKTYEAVYKMSIRQFKEASDLYLETVASFTS-TEFIDYSRFIQYLIFTSLLHLDRVSLKQ 231
Query: 324 QVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQ 383
+VI S + P+L+D+L FYN YA LA D++ D Y+A H +
Sbjct: 232 KVIDSPDVLSVINDTPKLQDLLQSFYNGDYANFFGALAHFSDSIKGDRYLAEHSRFFTRE 291
Query: 384 IRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQ 443
+R A Q+ Y S L MS F + ++ EL + G++ +ID + ++ +
Sbjct: 292 MRILAYNQFLESYSSVKLESMSNQFGVSYDFIDRELSRFVAAGRLNCKIDKVSGVIETTR 351
Query: 444 QDQRSTTFEKSLNVG 458
D ++ ++ +L G
Sbjct: 352 SDAKNHLYKTTLQQG 366
>FB|FBgn0028688 [details] [associations]
symbol:Rpn7 "Regulatory particle non-ATPase 7" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;NAS;IDA] [GO:0006508
"proteolysis" evidence=ISS;NAS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 EMBL:AE014297
GO:GO:0022008 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0008541 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 BRENDA:3.4.25.1 KO:K03037
EMBL:AF145308 EMBL:AY052008 RefSeq:NP_651048.1 UniGene:Dm.3424
ProteinModelPortal:Q9V3G7 DIP:DIP-23841N IntAct:Q9V3G7
MINT:MINT-845287 STRING:Q9V3G7 PaxDb:Q9V3G7 PRIDE:Q9V3G7
EnsemblMetazoa:FBtr0084294 GeneID:42641 KEGG:dme:Dmel_CG5378
UCSC:CG5378-RA CTD:42641 FlyBase:FBgn0028688 InParanoid:Q9V3G7
OMA:PWYEHIC OrthoDB:EOG4XPNXD PhylomeDB:Q9V3G7 GenomeRNAi:42641
NextBio:829829 Bgee:Q9V3G7 GermOnline:CG5378 Uniprot:Q9V3G7
Length = 389
Score = 255 (94.8 bits), Expect = 5.4e-19, P = 5.4e-19
Identities = 73/315 (23%), Positives = 144/315 (45%)
Query: 144 TLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKC 203
T+D L+ + +++E+LD +++ + N + +R + ++ GD + A
Sbjct: 64 TVDKDLLARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETA 123
Query: 204 YSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTK 263
+ + + + H +D+ ++IR+ ++ + + ++KA+ + EG D ++ +
Sbjct: 124 FRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIE--EGGDWDRR--NR 179
Query: 264 LKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEK 323
LKV G+ +A R +K AA FFL + + EL+ Y A+ R+EL
Sbjct: 180 LKVYQGVYSVAVRDFKAAATFFLDTVSTFTSY-ELMDYPTFVRYTVYVAMIALPRNELRD 238
Query: 324 QVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQ 383
+VI S + L P ++ L YN +Y LA + L LD I PH +
Sbjct: 239 KVIKGSEIQEVLHGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVRE 298
Query: 384 IRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQ 443
+R Q Y S L M+ +F T++ ++ EL I G++ A++D I+ +
Sbjct: 299 MRILGYTQLLESYRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVETNR 358
Query: 444 QDQRSTTFEKSLNVG 458
D ++ ++ ++ G
Sbjct: 359 PDNKNWQYQATIKQG 373
>WB|WBGene00004463 [details] [associations]
symbol:rpn-7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0002119 GO:GO:0018996 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM EMBL:Z68227 PIR:T22413
RefSeq:NP_501632.1 ProteinModelPortal:Q20585 DIP:DIP-26993N
IntAct:Q20585 MINT:MINT-211626 STRING:Q20585 PaxDb:Q20585
EnsemblMetazoa:F49C12.8.1 EnsemblMetazoa:F49C12.8.2 GeneID:177753
KEGG:cel:CELE_F49C12.8 UCSC:F49C12.8 CTD:177753 WormBase:F49C12.8
InParanoid:Q20585 NextBio:898240 Uniprot:Q20585
Length = 410
Score = 246 (91.7 bits), Expect = 8.8e-18, P = 8.8e-18
Identities = 76/313 (24%), Positives = 150/313 (47%)
Query: 156 KAA--MKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDYCTN 213
KAA K++++ ++++ + N + +R+G ++Y GD NALK Y+ +
Sbjct: 88 KAANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVG 147
Query: 214 GKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGLAEL 273
+ +D+ +IRV ++ + + ++ KA+ + +G D + +L+ L +
Sbjct: 148 MGYRIDVVFAMIRVGLFFLDHHLINKFITKAKELME--QGGDWERK--NRLRSYEALYRM 203
Query: 274 ATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSS---- 329
+ R + AA FL+A + + EL++ N+ Y + DR +L +VI +
Sbjct: 204 SVRDFAGAADLFLEAVPTFGSY-ELMTYENLILYTVITTTFALDRPDLRTKVIRCNEVQE 262
Query: 330 ---GFKLFLELEPQLRDILVQFYNSKYATCLNLLAQI-MDNLLLDMYIAPHVNTLYTQIR 385
G L L P +R+ L +Y+ Y LA + + D Y++PH N +R
Sbjct: 263 QLTGGGLNGTLIP-VREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMR 321
Query: 386 NRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQD 445
+RA Q+ +PY + ++ M+ F + ++ EL LI GQ+Q RID+ N ++ +D
Sbjct: 322 HRAYEQFLTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRD 381
Query: 446 QRSTTFEKSLNVG 458
++ ++ + G
Sbjct: 382 SKNHLYKAVIKDG 394
>GENEDB_PFALCIPARUM|PF11_0303 [details] [associations]
symbol:PF11_0303 "26S proteasome regulatory
complex subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 EMBL:AE014186
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
ProtClustDB:CLSZ2444089 RefSeq:XP_001347974.2
ProteinModelPortal:Q8II71 IntAct:Q8II71 MINT:MINT-1646226
PRIDE:Q8II71 EnsemblProtists:PF11_0303:mRNA GeneID:810850
KEGG:pfa:PF11_0303 EuPathDB:PlasmoDB:PF3D7_1129200 Uniprot:Q8II71
Length = 393
Score = 245 (91.3 bits), Expect = 8.9e-18, P = 8.9e-18
Identities = 71/315 (22%), Positives = 142/315 (45%)
Query: 146 DPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDL--GDHYLDCGDLSNALKC 203
D ++ +KA +L +++N L N +S+ +D L + + D NA K
Sbjct: 70 DEEYFKSLKEKADEELNQIENKLSESAENF--DSLDNKNDVLLKANFFCKISDKENAFKE 127
Query: 204 YSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTK 263
Y +D+ L +IR+ ++ + ++ Y+ +A + +G D + K
Sbjct: 128 YEETYKKGIGMGMKLDILLTMIRICIFYNDVKNLKKYLEQARTQME--KGGDWERK--NK 183
Query: 264 LKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEK 323
LK+ L + R + A++ + A + E++S I Y + + T +R+ L+K
Sbjct: 184 LKIYEALNYIMIRNFAEASKILIDAASTFTA-TEIISYEKIIFYVVILGIMTEERTVLDK 242
Query: 324 QVIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQ 383
+++ SS + L L FY+ Y T + +I + D Y+ H
Sbjct: 243 KILNSSVILQITSSDEDLHTYLHSFYHCDYRTFMEKTIKIAMRVKRDRYLGRHYRYFIRN 302
Query: 384 IRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQ 443
R RA Q+ P+ + L M+ AF + + +ENE+ + I +G++ +ID N + + Q
Sbjct: 303 TRVRAYKQFLEPFKNVTLKNMAFAFGVSEEFIENEISSFIANGKLNCKIDKVNGSIESNQ 362
Query: 444 QDQRSTTFEKSLNVG 458
++R+T ++ ++ G
Sbjct: 363 PNERNTMYQNTIKKG 377
>TAIR|locus:2126798 [details] [associations]
symbol:AT4G24820 "AT4G24820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009735 "response to
cytokinin stimulus" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0051302
"regulation of cell division" evidence=RCA] [GO:0051510 "regulation
of unidimensional cell growth" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0051788 "response to misfolded
protein" evidence=RCA] [GO:0080129 "proteasome core complex
assembly" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0030163 GO:GO:0000502 EMBL:AL161562
EMBL:AL049657 eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602
EMBL:AY054500 EMBL:AY093269 EMBL:BT000653 EMBL:AY087847
IPI:IPI00520982 PIR:T06666 RefSeq:NP_567709.1 RefSeq:NP_974611.1
UniGene:At.3132 ProteinModelPortal:Q93Y35 IntAct:Q93Y35
STRING:Q93Y35 PaxDb:Q93Y35 PRIDE:Q93Y35 DNASU:828585
EnsemblPlants:AT4G24820.1 EnsemblPlants:AT4G24820.2 GeneID:828585
KEGG:ath:AT4G24820 TAIR:At4g24820 HOGENOM:HOG000214998
InParanoid:Q93Y35 KO:K03037 OMA:YTVYVCM PhylomeDB:Q93Y35
ProtClustDB:CLSN2689595 Genevestigator:Q93Y35 GermOnline:AT4G24820
Uniprot:Q93Y35
Length = 387
Score = 241 (89.9 bits), Expect = 2.4e-17, P = 2.4e-17
Identities = 69/314 (21%), Positives = 136/314 (43%)
Query: 145 LDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 204
LD L+E+ +L+KLD + + + N + +R H +++ D AL+
Sbjct: 63 LDQSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQL 122
Query: 205 SRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKL 264
+D+ ++++ + ++ V ++KA+ F EG D + +L
Sbjct: 123 KLTEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKL--FEEGGDWERK--NRL 178
Query: 265 KVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQ 324
KV GL ++TR +K AA FL + + + E+ Y L ++ T DR L+++
Sbjct: 179 KVYEGLYCMSTRNFKKAASLFLDSISTFTTY-EIFPYETFIFYTVLTSIITLDRVSLKQK 237
Query: 325 VIFSSGFKLFLELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLLDMYIAPHVNTLYTQI 384
V+ + L P L + L Y +Y + A + + D Y+ PH ++
Sbjct: 238 VVDAPEILTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREV 297
Query: 385 RNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQ 444
R Q+ Y S + M+ AF ++ ++ EL I G++ +ID +L +
Sbjct: 298 RTVVYSQFLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRP 357
Query: 445 DQRSTTFEKSLNVG 458
D ++ ++ ++ G
Sbjct: 358 DAKNALYQATIKQG 371
>SGD|S000006312 [details] [associations]
symbol:RPN7 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF01399 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00088
SGD:S000006312 GO:GO:0005634 GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BK006949 Gene3D:1.25.40.10 GO:GO:0008541
GO:GO:0006511 EMBL:U32445 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 PDB:4B4T PDBsum:4B4T
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM OrthoDB:EOG40S3QF
EMBL:AY692769 PIR:S59773 RefSeq:NP_015433.1
ProteinModelPortal:Q06103 DIP:DIP-2880N IntAct:Q06103
MINT:MINT-531082 STRING:Q06103 PaxDb:Q06103 PeptideAtlas:Q06103
EnsemblFungi:YPR108W GeneID:856223 KEGG:sce:YPR108W NextBio:981456
Genevestigator:Q06103 GermOnline:YPR108W Uniprot:Q06103
Length = 429
Score = 233 (87.1 bits), Expect = 3.2e-16, P = 3.2e-16
Identities = 75/312 (24%), Positives = 139/312 (44%)
Query: 151 ETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRARDY 210
E+K K+ K++KL+ D ++++ + +LG++Y GD NA K ++
Sbjct: 107 ESKIKELNEKIQKLEED----DEGELEQA--QAWINLGEYYAQIGDKDNAEKTLGKSLSK 160
Query: 211 CTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAAGL 270
+ +D+ L + R+ + + +V K EA E K + + K G+
Sbjct: 161 AISTGAKIDVMLTIARLGFFYNDQLYVKE---KLEAVNSMIE-KGGDWERRNRYKTYYGI 216
Query: 271 AELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFSSG 330
LA R +K AA+ + + + EL S +IATY + L T +R++L+ +VI S
Sbjct: 217 HCLAVRNFKEAAKLLVDSLATFTSI-ELTSYESIATYASVTGLFTLERTDLKSKVIDSPE 275
Query: 331 FKLFLELEPQLRDI---LVQFYNSKYATCLNLLAQIMDNLLLDM-YIAPHVNTLYTQIRN 386
+ L+ I + Y S YA+ L + N+L+ Y+ H + ++R
Sbjct: 276 LLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVREMRR 335
Query: 387 RALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQ 446
+ Q Y + L M+ AF ++ L+N+L I + Q+ ID N I+ + D
Sbjct: 336 KVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETNRPDN 395
Query: 447 RSTTFEKSLNVG 458
++ + + G
Sbjct: 396 KNAQYHLLVKQG 407
>UNIPROTKB|J3QL53 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
EMBL:AC135056 HGNC:HGNC:4549 ChiTaRS:GPS1 Ensembl:ENST00000583961
Uniprot:J3QL53
Length = 168
Score = 177 (67.4 bits), Expect = 2.7e-12, P = 2.7e-12
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 600 DLESYANSYTGLARLFRLIYVADHCPALRHEALRMAIQYVMQTYNVNLYIQLHR 653
DLE YA SY+GL R+ RL ++ADHCP LR EAL+MA+ +V +T+NV++Y ++HR
Sbjct: 83 DLEQYAASYSGLMRIERLQFIADHCPTLRVEALKMALSFVQRTFNVDMYEEIHR 136
>CGD|CAL0003998 [details] [associations]
symbol:RPN7 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0031144 "proteasome localization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF01399 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00088 CGD:CAL0003998 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 EMBL:AACQ01000069
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998
KO:K03037 RefSeq:XP_716421.1 ProteinModelPortal:Q5A421
STRING:Q5A421 GeneID:3641909 KEGG:cal:CaO19.7286 Uniprot:Q5A421
Length = 400
Score = 186 (70.5 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 68/329 (20%), Positives = 133/329 (40%)
Query: 141 DIPTLDPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKE-SIRRGHDDLGDHYLDCGDLSN 199
D P + L E ++ + +E+L + +K + E + L ++Y D N
Sbjct: 61 DFPYDESLYRELASENEKV-IEELKSKIKEAEDEEDTELDVASTTTKLAEYYTKIIDRKN 119
Query: 200 ALKCYSRARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQA 259
A + + + + N +D L + R+ + + V ++ + + +G D +
Sbjct: 120 ATETFKKVLELTPNTGSKIDHLLTLTRIDFFFNDLPSVQKHLEQIGQLSE--KGGDWERR 177
Query: 260 VFTKLKVAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRS 319
+ K G+ LATR + AA+ + + + EL S IA + + + +R
Sbjct: 178 --NRFKAYNGIYMLATRNFAEAAKLLIDSLATFTS-TELCSYEAIAHCAIVAGVLSLERV 234
Query: 320 ELEKQVIFSSGFKLFLELEPQLRDILV---QFYNSKYATCLNLLAQIMDNLLL-DMYIAP 375
+L+ ++I S P L +L Y +Y L + + LLL + Y+
Sbjct: 235 DLKNKIIDSPEILSIASTTPNLEPLLNLTNSLYTCEYNCFFQYLLESYEKLLLPNKYLYK 294
Query: 376 HVNTLYTQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSH 435
H N ++R +A Q Y S L M+ FN + + L+ +L I + ++ ID
Sbjct: 295 HANFFLREMRCKAYNQLLESYKSLSLKSMATNFNISEEFLDQDLCKFIPNKKLNCTIDKV 354
Query: 436 NKILYAKQQDQRSTTFEKSLNVGKEYARK 464
N I+ + D ++ + + G K
Sbjct: 355 NGIIETNRPDNKNNQYHALIKQGDNLLTK 383
>POMBASE|SPBC582.07c [details] [associations]
symbol:rpn7 "19S proteasome regulatory subunit Rpn7"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0031144 "proteasome
localization" evidence=IGI] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0043248 "proteasome
assembly" evidence=IGI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 PomBase:SPBC582.07c GO:GO:0005829 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10 InterPro:IPR011991
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0043248
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 GO:GO:0031144
GO:GO:0008540 GO:GO:0031595 HOGENOM:HOG000214998 KO:K03037
OMA:YTVYVCM EMBL:D89258 PIR:T37976 PIR:T43183 RefSeq:NP_595175.1
ProteinModelPortal:Q10335 STRING:Q10335 EnsemblFungi:SPBC582.07c.1
GeneID:2540794 KEGG:spo:SPBC582.07c OrthoDB:EOG40S3QF
NextBio:20801912 Uniprot:Q10335
Length = 409
Score = 172 (65.6 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 58/317 (18%), Positives = 133/317 (41%)
Query: 146 DPLLIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYS 205
D + + KK KL + D +++ + + + I + D+Y + D ++
Sbjct: 77 DSNFLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERGVQLCD 136
Query: 206 RARDYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLK 265
+ T +D+ + IR++ + V + K + P +G D + +LK
Sbjct: 137 ETFERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLK--PLIEKGGDWERK--NRLK 192
Query: 266 VAAGLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQV 325
G+ ++ R + AA L + ELL ++ Y + + DR +++ ++
Sbjct: 193 AYQGIYLMSIRNFSGAADLLLDCMSTFSS-TELLPYYDVVRYAVISGAISLDRVDVKTKI 251
Query: 326 IFSSGFKLFL---ELEPQLRDILVQFYNSKYATCLNLLAQI-MDNLLLDMYIAPHVNTLY 381
+ S L E L + Y Y+ LA + +++L D ++ H
Sbjct: 252 VDSPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYV 311
Query: 382 TQIRNRALIQYFSPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYA 441
++R RA Q Y + ++ M+ +F ++ ++ +L + I D ++ ID N +++
Sbjct: 312 REMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFT 371
Query: 442 KQQDQRSTTFEKSLNVG 458
+ D+++ +++ + G
Sbjct: 372 NRPDEKNRQYQEVVKQG 388
>ASPGD|ASPL0000043868 [details] [associations]
symbol:AN1922 species:162425 "Emericella nidulans"
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0043248 "proteasome
assembly" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031144 "proteasome
localization" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:BN001307 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000502 EMBL:AACD01000029 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037 OrthoDB:EOG40S3QF
RefSeq:XP_659526.1 ProteinModelPortal:Q5BC08 STRING:Q5BC08
EnsemblFungi:CADANIAT00008582 GeneID:2874584 KEGG:ani:AN1922.2
OMA:FTSYELC Uniprot:Q5BC08
Length = 484
Score = 121 (47.7 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 32/118 (27%), Positives = 53/118 (44%)
Query: 335 LELEPQLRDILVQFYNSKYATCLNLLAQIMDNLLL-DMYIAPHVNTLYTQIRNRALIQYF 393
++ P L +++ YN Y T LA + D+ L D Y+ H ++R RA Q
Sbjct: 339 IDFTP-LSNLVSSLYNGNYRTFFLALAAVEDHFLTQDRYLYEHRAWFVREMRLRAYQQLL 397
Query: 394 SPYLSADLNKMSVAFNTTIQALENELMTLILDGQIQARIDSHNKILYAKQQDQRSTTF 451
Y LN M+ F T+ L+ +L I + +I ID N I+ + D ++ +
Sbjct: 398 QSYRVVGLNSMANDFGVTVDYLDRDLARFISNNRIACTIDRVNGIIETNRPDDKNKQY 455
Score = 95 (38.5 bits), Expect = 9.5e-09, Sum P(2) = 9.5e-09
Identities = 37/187 (19%), Positives = 80/187 (42%)
Query: 149 LIETKNKKAAMKLEKLDNDLKNYKSNSIKESIRRGHDDLGDHYLDCGDLSNALKCYSRAR 208
L+E N+K + +K +++ + ++ ++ + + GD A++ +
Sbjct: 106 LVED-NRKELAEFQKEEDEAEEAAGDT---EVQAARGKRAEFWARVGDKDKAIESHETLL 161
Query: 209 DYCTNGKHVVDMCLNVIRVSVYLQNWSHVLSYVNKAEATPDFAEGKDNNQAVFTKLKVAA 268
+ T +D+ L +IR+ ++ + +V + +AE + G D ++ +LK
Sbjct: 162 EKTTFLGSKIDLVLAMIRIGLFFGDTLYVKKNIERAEGLIE--SGGDWDRR--NRLKAYK 217
Query: 269 GLAELATRKYKTAARFFLQAHFDYCDFPELLSPNNIATYGGLCALATFDRSELEKQVIFS 328
GL L R Y AA L + + + EL S + + Y L + R + + +V+ +
Sbjct: 218 GLHLLTVRSYSAAAPLLLDSLSTFTSY-ELCSYSALVIYAVLAGSLSLKRVDFKAKVVDA 276
Query: 329 SGFKLFL 335
K L
Sbjct: 277 PEIKAIL 283
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 971 947 0.00094 122 3 11 22 0.36 34
38 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 40
No. of states in DFA: 607 (65 KB)
Total size of DFA: 404 KB (2189 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 80.77u 0.10s 80.87t Elapsed: 00:01:03
Total cpu time: 80.79u 0.10s 80.89t Elapsed: 00:01:04
Start: Thu Aug 15 13:48:43 2013 End: Thu Aug 15 13:49:47 2013