Query psy11734
Match_columns 817
No_of_seqs 327 out of 4424
Neff 9.3
Searched_HMMs 46136
Date Fri Aug 16 17:33:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11734.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11734hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2532|consensus 100.0 1.6E-32 3.6E-37 304.2 22.0 323 1-445 134-458 (466)
2 KOG2532|consensus 100.0 3.9E-28 8.5E-33 269.3 30.0 289 513-802 65-457 (466)
3 TIGR00894 2A0114euk Na(+)-depe 100.0 3.2E-27 6.9E-32 269.1 36.8 344 444-800 12-458 (465)
4 COG2271 UhpC Sugar phosphate p 100.0 1.7E-27 3.6E-32 248.5 23.8 304 443-793 21-435 (448)
5 TIGR00894 2A0114euk Na(+)-depe 100.0 2.3E-27 4.9E-32 270.2 23.8 326 1-447 137-463 (465)
6 PRK09556 uhpT sugar phosphate 100.0 1.9E-26 4E-31 262.5 28.2 300 446-792 24-449 (467)
7 COG2271 UhpC Sugar phosphate p 99.9 1.4E-27 3.1E-32 249.0 14.4 310 3-439 125-439 (448)
8 COG2814 AraJ Arabinose efflux 99.9 3.9E-25 8.5E-30 234.9 29.3 300 444-794 6-388 (394)
9 COG2223 NarK Nitrate/nitrite t 99.9 2.4E-25 5.3E-30 233.2 25.5 307 440-793 3-402 (417)
10 PRK03545 putative arabinose tr 99.9 1.6E-24 3.6E-29 240.9 31.0 295 448-793 6-381 (390)
11 PRK11663 regulatory protein Uh 99.9 4.4E-24 9.4E-29 240.7 33.1 403 201-794 21-426 (434)
12 PRK09705 cynX putative cyanate 99.9 1.8E-24 3.9E-29 240.5 27.5 295 446-793 5-382 (393)
13 PRK15034 nitrate/nitrite trans 99.9 2.7E-24 5.9E-29 237.0 26.7 310 435-794 18-456 (462)
14 PLN00028 nitrate transmembrane 99.9 7.6E-24 1.6E-28 241.0 30.9 404 198-794 28-435 (476)
15 PRK03699 putative transporter; 99.9 6.5E-24 1.4E-28 236.4 27.5 300 447-797 3-385 (394)
16 TIGR02332 HpaX 4-hydroxyphenyl 99.9 4.7E-24 1E-28 238.5 25.5 288 446-782 3-411 (412)
17 PRK10489 enterobactin exporter 99.9 3.9E-23 8.4E-28 232.0 30.7 384 195-791 9-398 (417)
18 PRK10406 alpha-ketoglutarate t 99.9 3.8E-23 8.3E-28 233.0 30.2 296 446-791 17-423 (432)
19 PRK11551 putative 3-hydroxyphe 99.9 3.2E-23 7E-28 231.9 28.3 295 446-791 10-395 (406)
20 PRK11273 glpT sn-glycerol-3-ph 99.9 3.3E-23 7E-28 234.9 28.5 307 445-797 23-440 (452)
21 PRK10504 putative transporter; 99.9 5E-22 1.1E-26 226.8 38.0 404 203-766 10-417 (471)
22 COG2814 AraJ Arabinose efflux 99.9 2.1E-24 4.6E-29 229.3 14.3 285 1-439 107-391 (394)
23 TIGR00897 2A0118 polyol permea 99.9 7.4E-22 1.6E-26 220.4 35.5 381 202-792 12-401 (402)
24 TIGR00712 glpT glycerol-3-phos 99.9 1.4E-22 3E-27 228.9 29.7 406 201-796 25-437 (438)
25 PRK09556 uhpT sugar phosphate 99.9 1E-24 2.3E-29 248.1 12.5 319 1-439 128-455 (467)
26 TIGR00890 2A0111 Oxalate/Forma 99.9 3.4E-23 7.4E-28 228.7 22.9 285 450-785 2-375 (377)
27 TIGR00893 2A0114 d-galactonate 99.9 3.8E-22 8.3E-27 221.6 30.6 388 217-790 8-397 (399)
28 PRK09528 lacY galactoside perm 99.9 1.3E-22 2.8E-27 227.9 26.7 391 198-795 5-406 (420)
29 TIGR00891 2A0112 putative sial 99.9 1E-22 2.3E-27 227.4 25.7 286 442-776 3-400 (405)
30 TIGR00892 2A0113 monocarboxyla 99.9 9.7E-23 2.1E-27 230.7 25.6 296 445-787 13-416 (455)
31 PRK10642 proline/glycine betai 99.9 5.3E-22 1.1E-26 227.2 31.7 294 450-792 15-430 (490)
32 TIGR02332 HpaX 4-hydroxyphenyl 99.9 1.6E-23 3.4E-28 234.2 18.0 288 1-366 102-397 (412)
33 PRK12307 putative sialic acid 99.9 2.2E-22 4.8E-27 226.7 27.4 279 440-766 7-385 (426)
34 TIGR00899 2A0120 sugar efflux 99.9 7.8E-22 1.7E-26 218.1 30.3 367 210-791 4-373 (375)
35 TIGR00903 2A0129 major facilit 99.9 6.9E-22 1.5E-26 216.6 29.2 359 215-789 3-362 (368)
36 PRK09952 shikimate transporter 99.9 7.3E-22 1.6E-26 222.7 29.6 298 445-791 16-432 (438)
37 TIGR01299 synapt_SV2 synaptic 99.9 5.7E-22 1.2E-26 231.4 29.0 296 445-792 161-734 (742)
38 PRK15402 multidrug efflux syst 99.9 1.1E-21 2.5E-26 219.4 29.9 274 446-766 8-372 (406)
39 PRK14995 methyl viologen resis 99.9 1.2E-23 2.7E-28 240.8 13.3 310 1-365 100-414 (495)
40 PRK10091 MFS transport protein 99.9 1.2E-21 2.6E-26 217.2 28.1 290 452-792 4-376 (382)
41 PRK03633 putative MFS family t 99.9 1.2E-21 2.5E-26 217.2 27.8 283 453-790 8-370 (381)
42 PRK15075 citrate-proton sympor 99.9 2.3E-21 4.9E-26 218.7 28.3 275 445-766 9-396 (434)
43 TIGR00893 2A0114 d-galactonate 99.9 1.7E-22 3.7E-27 224.5 18.8 283 1-365 88-374 (399)
44 PRK11663 regulatory protein Uh 99.9 7.3E-23 1.6E-27 230.7 16.0 309 2-438 118-428 (434)
45 PRK03545 putative arabinose tr 99.9 6.9E-23 1.5E-27 227.9 15.6 281 1-437 103-383 (390)
46 TIGR00711 efflux_EmrB drug res 99.9 1.3E-20 2.7E-25 216.2 34.4 398 206-765 5-411 (485)
47 PRK05122 major facilitator sup 99.9 9.6E-21 2.1E-25 211.4 31.5 369 201-793 13-390 (399)
48 PRK10213 nepI ribonucleoside t 99.9 1.1E-20 2.4E-25 210.0 31.7 287 447-784 16-383 (394)
49 TIGR00900 2A0121 H+ Antiporter 99.9 2.8E-21 6E-26 212.5 26.6 354 208-765 4-364 (365)
50 TIGR00903 2A0129 major facilit 99.9 1.1E-22 2.5E-27 222.8 15.0 255 1-362 85-340 (368)
51 PRK10054 putative transporter; 99.9 2.2E-21 4.7E-26 215.7 25.2 369 202-786 6-378 (395)
52 PRK15011 sugar efflux transpor 99.9 1.6E-20 3.4E-25 209.1 31.8 373 202-791 14-390 (393)
53 PRK03893 putative sialic acid 99.9 2.2E-20 4.7E-25 214.9 33.8 419 204-782 21-443 (496)
54 PRK14995 methyl viologen resis 99.9 2.6E-20 5.6E-25 213.4 34.2 399 205-764 8-413 (495)
55 PRK09874 drug efflux system pr 99.9 9.4E-21 2E-25 212.1 29.8 374 202-791 13-397 (408)
56 PRK11010 ampG muropeptide tran 99.9 4.9E-20 1.1E-24 210.2 35.6 386 197-793 6-404 (491)
57 PRK11043 putative transporter; 99.9 3.9E-20 8.6E-25 206.6 34.0 346 209-765 9-358 (401)
58 TIGR00710 efflux_Bcr_CflA drug 99.9 1.7E-20 3.8E-25 208.1 30.2 343 212-764 14-361 (385)
59 TIGR00881 2A0104 phosphoglycer 99.9 4.3E-21 9.3E-26 212.1 24.9 367 212-766 4-374 (379)
60 TIGR00711 efflux_EmrB drug res 99.9 5.4E-23 1.2E-27 235.8 9.4 310 1-366 96-412 (485)
61 PRK10133 L-fucose transporter; 99.9 8.8E-21 1.9E-25 213.2 27.0 288 448-787 23-428 (438)
62 PRK11646 multidrug resistance 99.9 1.8E-20 3.9E-25 208.7 28.4 369 206-789 13-385 (400)
63 cd06174 MFS The Major Facilita 99.9 2.6E-20 5.6E-25 203.3 29.1 345 207-790 3-350 (352)
64 PRK11273 glpT sn-glycerol-3-ph 99.9 4E-22 8.7E-27 226.0 15.1 311 2-441 127-442 (452)
65 PRK12382 putative transporter; 99.9 8.9E-20 1.9E-24 203.1 31.6 367 201-791 13-388 (392)
66 TIGR00712 glpT glycerol-3-phos 99.9 7.6E-22 1.7E-26 222.8 14.9 307 2-438 125-437 (438)
67 PRK11102 bicyclomycin/multidru 99.9 9.5E-20 2.1E-24 201.7 31.0 361 218-791 6-371 (377)
68 TIGR00882 2A0105 oligosacchari 99.9 4E-20 8.7E-25 206.1 28.2 380 202-789 1-392 (396)
69 PRK10642 proline/glycine betai 99.9 2.2E-21 4.7E-26 222.1 17.0 269 1-365 124-405 (490)
70 TIGR00902 2A0127 phenyl propri 99.9 9.8E-20 2.1E-24 201.8 29.7 368 206-788 7-375 (382)
71 COG2223 NarK Nitrate/nitrite t 99.9 2.2E-21 4.7E-26 203.6 14.7 284 2-437 112-404 (417)
72 TIGR00898 2A0119 cation transp 99.9 7.9E-20 1.7E-24 210.7 28.5 277 495-792 98-495 (505)
73 PRK10406 alpha-ketoglutarate t 99.9 2.9E-21 6.2E-26 217.7 15.9 256 1-365 130-399 (432)
74 PRK15403 multidrug efflux syst 99.9 1.8E-19 4E-24 201.4 29.8 284 453-783 18-388 (413)
75 PF07690 MFS_1: Major Facilita 99.9 2.8E-20 6.1E-25 203.5 22.5 346 209-755 2-352 (352)
76 KOG2533|consensus 99.9 1.7E-21 3.7E-26 216.8 12.1 276 1-357 140-423 (495)
77 PF05977 MFS_3: Transmembrane 99.9 6.3E-19 1.4E-23 199.5 33.0 383 199-792 6-394 (524)
78 PRK09952 shikimate transporter 99.9 6E-21 1.3E-25 215.2 16.1 289 1-434 131-433 (438)
79 PRK11652 emrD multidrug resist 99.8 6.7E-19 1.5E-23 196.2 32.0 270 449-764 6-360 (394)
80 TIGR00886 2A0108 nitrite extru 99.8 5.6E-20 1.2E-24 202.6 22.9 360 204-751 2-366 (366)
81 PLN00028 nitrate transmembrane 99.8 1.2E-20 2.5E-25 214.9 17.1 299 1-437 130-436 (476)
82 PRK09705 cynX putative cyanate 99.8 6E-21 1.3E-25 212.2 14.2 285 1-443 103-391 (393)
83 PRK10473 multidrug efflux syst 99.8 1.3E-18 2.9E-23 193.6 33.1 346 203-766 3-351 (392)
84 TIGR00924 yjdL_sub1_fam amino 99.8 2.9E-18 6.3E-23 194.6 36.2 435 200-792 6-468 (475)
85 TIGR00889 2A0110 nucleoside tr 99.8 1.9E-19 4E-24 201.5 26.1 266 515-793 32-403 (418)
86 PRK11128 putative 3-phenylprop 99.8 7E-19 1.5E-23 195.0 30.4 360 212-786 13-373 (382)
87 PRK11902 ampG muropeptide tran 99.8 1.6E-18 3.4E-23 193.6 33.2 372 209-794 5-392 (402)
88 PRK10091 MFS transport protein 99.8 6.3E-21 1.4E-25 211.4 13.7 278 1-434 97-376 (382)
89 TIGR00897 2A0118 polyol permea 99.8 2.5E-20 5.3E-25 208.1 17.8 285 1-433 111-400 (402)
90 PRK10504 putative transporter; 99.8 1.7E-20 3.8E-25 214.1 16.9 309 1-366 104-417 (471)
91 PRK10077 xylE D-xylose transpo 99.8 1.2E-19 2.6E-24 207.8 23.5 308 445-793 6-458 (479)
92 TIGR00879 SP MFS transporter, 99.8 1.6E-19 3.4E-24 206.2 24.4 300 452-792 29-470 (481)
93 PRK11551 putative 3-hydroxyphe 99.8 1.2E-20 2.7E-25 211.0 14.6 285 1-435 109-397 (406)
94 PRK11195 lysophospholipid tran 99.8 9.1E-19 2E-23 194.6 29.3 376 202-792 2-380 (393)
95 TIGR00899 2A0120 sugar efflux 99.8 1.7E-20 3.8E-25 207.3 15.2 278 2-433 94-373 (375)
96 TIGR00895 2A0115 benzoate tran 99.8 1.4E-19 3E-24 201.5 22.5 377 205-761 19-397 (398)
97 TIGR00896 CynX cyanate transpo 99.8 3E-19 6.5E-24 196.0 24.4 331 222-767 19-351 (355)
98 PRK15402 multidrug efflux syst 99.8 5.2E-20 1.1E-24 206.0 16.8 261 1-365 107-371 (406)
99 KOG1330|consensus 99.8 2.6E-20 5.7E-25 196.6 13.4 284 445-765 27-413 (493)
100 TIGR00890 2A0111 Oxalate/Forma 99.8 3.1E-20 6.7E-25 205.0 14.7 260 1-365 97-358 (377)
101 TIGR00881 2A0104 phosphoglycer 99.8 4.5E-20 9.7E-25 203.9 13.9 283 1-366 89-374 (379)
102 PRK10207 dipeptide/tripeptide 99.8 1.5E-17 3.2E-22 189.0 34.6 434 203-793 14-477 (489)
103 PRK03699 putative transporter; 99.8 3.9E-18 8.5E-23 189.9 29.0 346 203-670 7-360 (394)
104 TIGR00792 gph sugar (Glycoside 99.8 1.5E-18 3.3E-23 196.2 25.7 358 214-766 10-382 (437)
105 PRK10213 nepI ribonucleoside t 99.8 9.6E-20 2.1E-24 202.5 15.5 254 1-365 114-367 (394)
106 TIGR00887 2A0109 phosphate:H+ 99.8 9.3E-19 2E-23 201.1 24.2 306 443-791 8-488 (502)
107 TIGR00710 efflux_Bcr_CflA drug 99.8 1.9E-19 4E-24 199.8 16.9 254 1-359 99-356 (385)
108 TIGR00885 fucP L-fucose:H+ sym 99.8 9.9E-18 2.1E-22 186.9 30.2 390 205-782 5-402 (410)
109 TIGR00887 2A0109 phosphate:H+ 99.8 1.5E-19 3.3E-24 207.7 15.6 285 1-365 121-455 (502)
110 TIGR00883 2A0106 metabolite-pr 99.8 8.8E-19 1.9E-23 194.7 21.2 274 461-782 3-391 (394)
111 TIGR00900 2A0121 H+ Antiporter 99.8 6.3E-20 1.4E-24 201.7 11.7 265 1-365 98-364 (365)
112 TIGR00892 2A0113 monocarboxyla 99.8 1E-19 2.2E-24 206.1 13.4 282 2-366 115-397 (455)
113 PRK09584 tppB putative tripept 99.8 4.1E-17 8.9E-22 186.3 34.7 434 196-791 13-478 (500)
114 TIGR00879 SP MFS transporter, 99.8 1.9E-19 4.2E-24 205.5 13.9 320 1-437 133-473 (481)
115 KOG2504|consensus 99.8 4.1E-18 8.9E-23 191.9 24.0 411 219-792 62-476 (509)
116 PRK15075 citrate-proton sympor 99.8 3.1E-19 6.8E-24 201.3 15.0 260 1-366 123-396 (434)
117 PRK11102 bicyclomycin/multidru 99.8 6.5E-19 1.4E-23 195.0 16.3 254 1-357 85-342 (377)
118 PRK11195 lysophospholipid tran 99.8 2.3E-19 5E-24 199.3 12.4 258 1-361 94-353 (393)
119 PRK06814 acylglycerophosphoeth 99.8 2E-17 4.3E-22 209.2 31.5 385 197-785 5-415 (1140)
120 TIGR00883 2A0106 metabolite-pr 99.8 4.2E-19 9.2E-24 197.2 14.4 262 1-366 102-377 (394)
121 PRK10489 enterobactin exporter 99.8 3.5E-19 7.6E-24 200.0 13.8 258 2-365 117-375 (417)
122 COG2807 CynX Cyanate permease 99.8 1.6E-17 3.5E-22 170.5 24.4 261 515-793 41-386 (395)
123 PRK11010 ampG muropeptide tran 99.8 6.1E-19 1.3E-23 201.2 15.5 285 2-435 114-404 (491)
124 PRK15034 nitrate/nitrite trans 99.8 3.5E-19 7.6E-24 196.6 12.9 281 1-438 134-458 (462)
125 TIGR02718 sider_RhtX_FptX side 99.8 4.4E-17 9.5E-22 181.3 29.7 369 205-787 3-386 (390)
126 PRK12307 putative sialic acid 99.8 4.9E-19 1.1E-23 199.5 14.2 268 1-365 112-384 (426)
127 PF07690 MFS_1: Major Facilita 99.8 1.2E-19 2.5E-24 198.6 8.6 257 1-355 91-352 (352)
128 PRK15011 sugar efflux transpor 99.8 5.4E-19 1.2E-23 196.7 13.7 270 9-434 119-391 (393)
129 PRK10077 xylE D-xylose transpo 99.8 5.5E-19 1.2E-23 202.3 13.8 282 1-362 126-424 (479)
130 PF06609 TRI12: Fungal trichot 99.8 8.8E-16 1.9E-20 173.1 38.4 444 200-794 37-556 (599)
131 PRK05122 major facilitator sup 99.8 1.7E-18 3.6E-23 193.4 16.3 277 1-440 118-395 (399)
132 COG0738 FucP Fucose permease [ 99.8 5.3E-17 1.2E-21 169.4 24.5 287 451-788 13-405 (422)
133 PRK11646 multidrug resistance 99.8 1.5E-18 3.3E-23 193.2 14.1 255 1-366 105-361 (400)
134 TIGR00886 2A0108 nitrite extru 99.8 2.1E-18 4.6E-23 190.0 14.8 257 1-351 97-366 (366)
135 PRK08633 2-acyl-glycerophospho 99.8 1.2E-16 2.7E-21 202.7 32.8 391 198-784 4-402 (1146)
136 TIGR00891 2A0112 putative sial 99.8 3.2E-17 6.9E-22 183.1 24.1 347 203-669 12-394 (405)
137 TIGR00895 2A0115 benzoate tran 99.8 2.6E-18 5.7E-23 191.2 15.2 282 2-361 112-397 (398)
138 TIGR01299 synapt_SV2 synaptic 99.8 8.3E-19 1.8E-23 205.0 10.7 335 1-434 261-734 (742)
139 KOG2533|consensus 99.8 2.6E-17 5.7E-22 183.4 21.8 273 443-758 37-424 (495)
140 PRK15403 multidrug efflux syst 99.8 2.6E-18 5.7E-23 192.1 13.5 264 1-364 110-373 (413)
141 PRK09874 drug efflux system pr 99.8 2.8E-18 6.1E-23 192.1 13.5 282 2-436 114-400 (408)
142 TIGR00902 2A0127 phenyl propri 99.8 3.8E-18 8.2E-23 189.1 14.1 255 2-365 101-356 (382)
143 PRK12382 putative transporter; 99.8 6.4E-18 1.4E-22 188.2 15.6 272 1-435 118-390 (392)
144 PRK11043 putative transporter; 99.7 2.4E-17 5.2E-22 184.1 17.8 256 2-364 101-357 (401)
145 PRK10133 L-fucose transporter; 99.7 8E-18 1.7E-22 189.3 13.7 259 1-365 123-408 (438)
146 KOG1330|consensus 99.7 6.4E-18 1.4E-22 178.7 11.9 285 1-370 127-418 (493)
147 COG2807 CynX Cyanate permease 99.7 1.4E-17 3E-22 171.0 13.9 280 3-438 107-389 (395)
148 TIGR00901 2A0125 AmpG-related 99.7 1.3E-16 2.8E-21 175.2 22.5 326 222-748 7-355 (356)
149 KOG4686|consensus 99.7 1.9E-17 4.1E-22 162.4 13.8 271 514-796 72-447 (459)
150 KOG0253|consensus 99.7 9.5E-17 2E-21 163.5 19.0 299 444-795 71-522 (528)
151 TIGR00898 2A0119 cation transp 99.7 1.6E-17 3.5E-22 191.4 15.4 278 1-359 186-467 (505)
152 PRK10473 multidrug efflux syst 99.7 3.3E-17 7.1E-22 182.4 17.0 192 2-299 98-289 (392)
153 PF13347 MFS_2: MFS/sugar tran 99.7 5.3E-16 1.1E-20 174.7 27.0 354 213-766 11-386 (428)
154 TIGR00896 CynX cyanate transpo 99.7 1.3E-17 2.7E-22 183.1 11.8 256 2-369 94-353 (355)
155 cd06174 MFS The Major Facilita 99.7 5.9E-17 1.3E-21 176.8 16.8 257 1-433 93-351 (352)
156 PRK11128 putative 3-phenylprop 99.7 2.9E-17 6.3E-22 182.1 14.0 255 2-365 101-356 (382)
157 PRK06814 acylglycerophosphoeth 99.7 1.5E-17 3.2E-22 210.3 12.9 263 1-364 114-396 (1140)
158 PRK10429 melibiose:sodium symp 99.7 6.1E-16 1.3E-20 176.3 24.8 360 210-766 13-395 (473)
159 PF01306 LacY_symp: LacY proto 99.7 3.6E-16 7.9E-21 168.6 21.0 387 200-795 4-403 (412)
160 PRK11902 ampG muropeptide tran 99.7 6.1E-17 1.3E-21 180.8 15.0 279 4-434 103-390 (402)
161 PF11700 ATG22: Vacuole efflux 99.7 1.4E-14 3E-19 162.5 33.6 358 242-792 73-468 (477)
162 TIGR00901 2A0125 AmpG-related 99.7 5.4E-17 1.2E-21 178.2 13.9 241 4-348 92-355 (356)
163 PRK11652 emrD multidrug resist 99.7 1.5E-16 3.4E-21 177.2 17.5 257 1-363 102-359 (394)
164 PRK15462 dipeptide/tripeptide 99.7 3.3E-14 7.2E-19 159.1 35.9 178 202-434 8-189 (493)
165 PRK03633 putative MFS family t 99.7 2E-15 4.3E-20 167.4 25.8 272 202-568 5-282 (381)
166 TIGR01272 gluP glucose/galacto 99.7 1.3E-16 2.7E-21 170.7 15.4 257 3-365 18-291 (310)
167 KOG0252|consensus 99.7 3E-17 6.5E-22 172.6 10.1 308 447-795 37-501 (538)
168 PRK03893 putative sialic acid 99.7 4E-17 8.6E-22 187.8 12.1 303 1-365 114-429 (496)
169 KOG0569|consensus 99.7 1.1E-15 2.3E-20 168.2 22.5 260 523-797 62-459 (485)
170 PRK09669 putative symporter Ya 99.7 1.8E-15 3.9E-20 171.2 24.6 353 213-767 19-391 (444)
171 PRK09848 glucuronide transport 99.7 9.2E-16 2E-20 173.9 22.2 161 596-766 221-390 (448)
172 PF03825 Nuc_H_symport: Nucleo 99.7 8E-15 1.7E-19 161.4 28.8 185 597-791 201-394 (400)
173 PRK10054 putative transporter; 99.7 3.5E-17 7.5E-22 182.0 10.0 255 2-365 103-360 (395)
174 KOG2504|consensus 99.7 5.7E-17 1.2E-21 182.7 10.9 331 3-434 143-476 (509)
175 PRK09528 lacY galactoside perm 99.7 3.3E-17 7.2E-22 184.1 8.2 274 19-438 127-407 (420)
176 KOG3764|consensus 99.7 1.7E-16 3.7E-21 164.2 12.5 267 513-793 98-455 (464)
177 TIGR00805 oat sodium-independe 99.7 2.1E-16 4.6E-21 184.5 15.0 197 1-269 178-397 (633)
178 PRK08633 2-acyl-glycerophospho 99.7 1.7E-16 3.7E-21 201.4 14.3 263 1-362 109-382 (1146)
179 PTZ00207 hypothetical protein; 99.7 1.5E-14 3.2E-19 164.4 27.3 465 215-791 39-551 (591)
180 PF06609 TRI12: Fungal trichot 99.7 4.9E-16 1.1E-20 175.1 15.1 392 3-436 139-556 (599)
181 TIGR02718 sider_RhtX_FptX side 99.7 6.1E-16 1.3E-20 172.1 15.5 246 12-365 114-367 (390)
182 KOG3764|consensus 99.7 1.8E-16 3.9E-21 164.0 9.1 258 1-365 165-430 (464)
183 TIGR00792 gph sugar (Glycoside 99.6 1.7E-16 3.8E-21 179.3 8.8 260 4-366 108-382 (437)
184 TIGR01301 GPH_sucrose GPH fami 99.6 1.8E-13 3.9E-18 152.6 30.7 405 208-794 9-473 (477)
185 TIGR00882 2A0105 oligosacchari 99.6 9.9E-16 2.2E-20 170.8 12.1 283 2-432 106-393 (396)
186 TIGR00805 oat sodium-independe 99.6 5.6E-14 1.2E-18 164.2 27.2 286 229-669 58-397 (633)
187 PRK11462 putative transporter; 99.6 1.1E-13 2.4E-18 156.6 27.4 356 212-766 18-389 (460)
188 TIGR00885 fucP L-fucose:H+ sym 99.6 4.6E-15 1E-19 165.4 14.6 255 2-365 101-382 (410)
189 COG2211 MelB Na+/melibiose sym 99.6 1E-13 2.2E-18 151.0 23.8 361 213-766 22-398 (467)
190 PRK10207 dipeptide/tripeptide 99.6 9.1E-15 2E-19 166.2 15.1 307 2-361 112-438 (489)
191 TIGR00889 2A0110 nucleoside tr 99.6 3.6E-13 7.8E-18 150.8 26.8 334 208-669 7-375 (418)
192 KOG0255|consensus 99.6 4E-13 8.8E-18 155.4 27.4 255 493-763 87-467 (521)
193 PF05977 MFS_3: Transmembrane 99.6 1.8E-14 3.8E-19 163.4 14.9 259 3-365 111-370 (524)
194 COG2270 Permeases of the major 99.6 8.5E-13 1.9E-17 139.2 25.5 383 222-792 34-429 (438)
195 TIGR00788 fbt folate/biopterin 99.6 8.7E-14 1.9E-18 157.7 18.8 370 205-766 28-415 (468)
196 TIGR00806 rfc RFC reduced fola 99.5 2.2E-13 4.8E-18 147.6 18.7 284 455-786 32-442 (511)
197 TIGR01272 gluP glucose/galacto 99.5 6.6E-13 1.4E-17 142.1 22.2 165 598-778 135-301 (310)
198 KOG0569|consensus 99.5 4.7E-14 1E-18 155.2 12.2 289 2-365 123-431 (485)
199 COG3104 PTR2 Dipeptide/tripept 99.5 5.2E-12 1.1E-16 136.4 26.6 187 196-437 13-209 (498)
200 KOG0253|consensus 99.5 4.8E-13 1E-17 136.8 16.6 280 1-358 172-490 (528)
201 KOG0254|consensus 99.5 5.5E-13 1.2E-17 153.5 19.3 249 521-786 89-476 (513)
202 KOG4686|consensus 99.5 5.8E-13 1.3E-17 131.2 14.3 268 1-369 142-419 (459)
203 PF00083 Sugar_tr: Sugar (and 99.5 6.2E-16 1.4E-20 175.6 -8.7 286 1-365 108-412 (451)
204 KOG2615|consensus 99.4 8.7E-13 1.9E-17 136.2 13.9 239 516-765 63-415 (451)
205 TIGR00924 yjdL_sub1_fam amino 99.4 2.5E-12 5.4E-17 146.2 18.1 313 2-362 109-441 (475)
206 PF00083 Sugar_tr: Sugar (and 99.4 2.9E-16 6.2E-21 178.4 -16.6 261 519-795 44-439 (451)
207 PRK15462 dipeptide/tripeptide 99.4 1.6E-11 3.5E-16 137.6 19.6 178 601-791 7-188 (493)
208 PF13347 MFS_2: MFS/sugar tran 99.4 6.5E-12 1.4E-16 141.5 15.3 255 8-366 116-386 (428)
209 KOG2563|consensus 99.4 2.1E-11 4.6E-16 129.4 17.3 305 444-794 38-452 (480)
210 PTZ00207 hypothetical protein; 99.3 4.1E-12 9E-17 144.6 12.1 394 2-439 127-557 (591)
211 PF11700 ATG22: Vacuole efflux 99.3 3E-11 6.5E-16 135.8 18.8 285 14-438 145-472 (477)
212 COG0738 FucP Fucose permease [ 99.3 1.1E-10 2.4E-15 122.5 20.4 343 222-669 31-388 (422)
213 PRK09584 tppB putative tripept 99.3 1.1E-10 2.4E-15 133.5 19.6 181 598-791 15-200 (500)
214 KOG0254|consensus 99.3 1.7E-11 3.6E-16 141.3 12.8 280 1-353 148-446 (513)
215 PRK09848 glucuronide transport 99.3 1E-11 2.2E-16 140.9 9.7 162 195-366 220-390 (448)
216 PRK09669 putative symporter Ya 99.3 2E-11 4.3E-16 138.3 11.4 250 11-366 125-390 (444)
217 KOG0252|consensus 99.3 5.8E-12 1.3E-16 133.2 6.4 318 1-438 150-502 (538)
218 TIGR00788 fbt folate/biopterin 99.2 1.7E-11 3.8E-16 138.9 8.7 275 2-366 127-415 (468)
219 KOG2563|consensus 99.2 5.8E-11 1.3E-15 126.0 10.6 255 12-365 157-422 (480)
220 PF03209 PUCC: PUCC protein; 99.2 1.9E-10 4.1E-15 122.2 13.2 297 4-437 98-401 (403)
221 KOG0255|consensus 99.1 1.6E-10 3.6E-15 133.6 12.0 277 1-360 177-464 (521)
222 PF03209 PUCC: PUCC protein; 99.1 2.2E-08 4.7E-13 106.7 26.7 187 595-791 200-397 (403)
223 COG2211 MelB Na+/melibiose sym 99.1 4.1E-10 9E-15 123.1 14.1 252 14-366 131-398 (467)
224 PRK10429 melibiose:sodium symp 99.1 1.5E-10 3.2E-15 132.1 9.6 254 12-366 123-395 (473)
225 COG2270 Permeases of the major 99.1 1.1E-09 2.3E-14 116.1 13.4 189 193-436 242-431 (438)
226 KOG2615|consensus 99.1 2.5E-10 5.4E-15 118.3 8.5 275 2-365 128-415 (451)
227 PF01306 LacY_symp: LacY proto 99.1 5.4E-10 1.2E-14 121.0 11.2 187 196-438 213-404 (412)
228 KOG3626|consensus 99.1 1.7E-09 3.6E-14 123.3 14.5 197 3-270 245-460 (735)
229 PRK11462 putative transporter; 99.0 3.2E-09 6.9E-14 120.4 14.8 242 17-366 131-389 (460)
230 PF03137 OATP: Organic Anion T 99.0 5.6E-11 1.2E-15 135.5 0.4 294 2-365 148-515 (539)
231 PF03825 Nuc_H_symport: Nucleo 99.0 3.3E-09 7.1E-14 117.1 14.2 192 196-436 200-397 (400)
232 KOG3626|consensus 99.0 1.7E-07 3.7E-12 107.1 26.8 283 229-669 122-459 (735)
233 TIGR00806 rfc RFC reduced fola 98.9 4.7E-08 1E-12 106.7 19.8 161 623-796 45-207 (511)
234 KOG3762|consensus 98.9 1.2E-08 2.5E-13 110.6 14.3 178 599-791 367-546 (618)
235 COG3104 PTR2 Dipeptide/tripept 98.9 8.9E-09 1.9E-13 111.7 12.7 188 597-797 14-211 (498)
236 TIGR01301 GPH_sucrose GPH fami 98.8 2E-07 4.3E-12 104.5 21.0 183 603-795 4-221 (477)
237 PF03137 OATP: Organic Anion T 98.8 4.2E-10 9.1E-15 128.4 -1.1 381 229-765 28-515 (539)
238 PF05631 DUF791: Protein of un 98.8 7.4E-08 1.6E-12 101.1 15.1 147 515-666 63-305 (354)
239 TIGR00880 2_A_01_02 Multidrug 98.8 4.3E-08 9.2E-13 91.0 11.0 131 647-791 6-137 (141)
240 PF03092 BT1: BT1 family; Int 98.7 3.7E-07 8E-12 102.3 15.5 131 226-365 12-151 (433)
241 KOG2816|consensus 98.6 6E-06 1.3E-10 92.2 24.7 247 249-591 72-346 (463)
242 KOG2325|consensus 98.6 6.8E-07 1.5E-11 98.3 15.7 114 444-591 27-145 (488)
243 TIGR00880 2_A_01_02 Multidrug 98.6 6.2E-08 1.4E-12 89.9 6.6 137 243-435 2-139 (141)
244 PF06963 FPN1: Ferroportin1 (F 98.6 8E-05 1.7E-09 82.2 30.1 393 204-764 3-417 (432)
245 KOG2816|consensus 98.4 6.7E-07 1.4E-11 99.7 9.1 263 10-367 127-395 (463)
246 PF06813 Nodulin-like: Nodulin 98.3 1.5E-05 3.2E-10 81.2 14.8 140 613-764 12-157 (250)
247 KOG2325|consensus 98.3 1.6E-06 3.4E-11 95.6 8.1 88 1-89 136-235 (488)
248 PF03092 BT1: BT1 family; Int 98.2 3.4E-06 7.4E-11 94.6 8.2 298 14-439 105-418 (433)
249 KOG3098|consensus 98.1 0.00037 8.1E-09 76.9 22.5 224 527-760 56-410 (461)
250 PF01770 Folate_carrier: Reduc 98.1 0.00085 1.8E-08 72.9 24.1 362 224-753 24-391 (412)
251 KOG4332|consensus 98.1 6.4E-05 1.4E-09 74.6 12.9 257 515-788 66-427 (454)
252 PF05631 DUF791: Protein of un 98.0 0.00053 1.1E-08 72.5 19.0 251 202-548 36-305 (354)
253 PF06813 Nodulin-like: Nodulin 97.9 4.5E-05 9.8E-10 77.7 9.6 137 214-362 13-155 (250)
254 TIGR00926 2A1704 Peptide:H+ sy 97.9 0.00023 4.9E-09 83.4 16.2 166 618-793 2-183 (654)
255 KOG0637|consensus 97.9 6E-05 1.3E-09 81.0 10.4 382 204-671 33-476 (498)
256 PF06779 DUF1228: Protein of u 97.9 1.5E-05 3.3E-10 65.7 4.6 79 464-579 5-83 (85)
257 KOG3762|consensus 97.7 0.00042 9.1E-09 76.0 12.2 157 198-366 366-524 (618)
258 PF12832 MFS_1_like: MFS_1 lik 97.6 0.00042 9.2E-09 56.7 8.6 65 606-671 3-67 (77)
259 PF12832 MFS_1_like: MFS_1 lik 97.4 0.0004 8.7E-09 56.8 6.5 63 208-271 5-67 (77)
260 TIGR00926 2A1704 Peptide:H+ sy 97.4 0.0006 1.3E-08 79.9 10.5 171 218-436 2-184 (654)
261 PF06963 FPN1: Ferroportin1 (F 97.3 0.0025 5.5E-08 70.5 13.2 149 193-353 249-407 (432)
262 PF01770 Folate_carrier: Reduc 97.2 0.0053 1.1E-07 66.9 13.8 277 14-357 112-395 (412)
263 TIGR00769 AAA ADP/ATP carrier 96.8 1.4 3.1E-05 49.6 29.1 256 519-783 41-345 (472)
264 KOG1237|consensus 96.7 0.22 4.8E-06 57.5 22.1 176 205-435 39-246 (571)
265 PF07672 MFS_Mycoplasma: Mycop 96.7 0.0081 1.8E-07 60.5 9.0 57 26-82 1-61 (267)
266 TIGR00769 AAA ADP/ATP carrier 96.7 0.14 3E-06 57.6 19.7 146 603-763 7-190 (472)
267 COG0477 ProP Permeases of the 96.4 0.13 2.8E-06 53.8 17.2 154 618-783 17-176 (338)
268 KOG3810|consensus 96.4 0.0085 1.8E-07 62.4 7.4 309 16-440 115-427 (433)
269 PF13000 Acatn: Acetyl-coenzym 96.2 0.81 1.8E-05 50.8 21.2 162 596-764 271-467 (544)
270 KOG3098|consensus 96.1 0.088 1.9E-06 58.5 14.0 155 196-357 233-407 (461)
271 PRK03612 spermidine synthase; 96.0 0.46 9.9E-06 54.6 19.8 152 608-766 19-174 (521)
272 COG0477 ProP Permeases of the 96.0 0.013 2.9E-07 61.5 6.8 75 515-591 31-109 (338)
273 PF06779 DUF1228: Protein of u 95.7 0.022 4.7E-07 47.2 5.2 77 215-302 4-80 (85)
274 KOG3574|consensus 95.7 1.3 2.8E-05 47.4 19.0 163 596-765 258-432 (510)
275 PF02487 CLN3: CLN3 protein; 95.2 3.1 6.6E-05 45.7 21.0 67 523-591 61-127 (402)
276 PF02487 CLN3: CLN3 protein; 94.7 0.11 2.4E-06 56.8 8.5 74 6-86 123-198 (402)
277 PRK03612 spermidine synthase; 94.7 0.24 5.3E-06 56.8 11.6 148 208-362 19-169 (521)
278 PF05978 UNC-93: Ion channel r 94.5 1.4 3E-05 41.6 14.4 140 612-763 5-150 (156)
279 KOG3810|consensus 93.8 0.7 1.5E-05 48.7 11.5 266 515-794 35-423 (433)
280 PF00854 PTR2: POT family; In 92.8 0.89 1.9E-05 50.0 11.6 110 683-795 5-126 (372)
281 KOG0637|consensus 92.2 0.24 5.1E-06 54.1 5.7 151 603-759 32-200 (498)
282 KOG3574|consensus 91.7 1.6 3.4E-05 46.7 10.8 166 196-366 258-433 (510)
283 PF13000 Acatn: Acetyl-coenzym 90.8 3.2 6.9E-05 46.3 12.6 166 197-366 272-469 (544)
284 PF05978 UNC-93: Ion channel r 90.8 2.2 4.9E-05 40.2 10.1 63 526-591 42-104 (156)
285 KOG1479|consensus 89.8 14 0.0003 40.5 16.2 177 604-789 19-201 (406)
286 TIGR00939 2a57 Equilibrative N 89.6 40 0.00087 37.9 22.7 56 702-757 371-427 (437)
287 KOG1237|consensus 88.4 13 0.00028 43.2 15.9 174 605-791 39-244 (571)
288 PF03219 TLC: TLC ATP/ADP tran 88.0 18 0.00038 41.2 16.4 46 718-763 158-205 (491)
289 PF00854 PTR2: POT family; In 86.1 0.45 9.7E-06 52.4 2.4 74 4-78 42-118 (372)
290 KOG1479|consensus 84.9 66 0.0014 35.3 21.5 132 201-339 16-153 (406)
291 PF07672 MFS_Mycoplasma: Mycop 83.9 13 0.00028 38.0 11.2 159 593-762 84-266 (267)
292 KOG4332|consensus 83.2 16 0.00036 37.3 11.4 41 231-271 64-104 (454)
293 COG3202 ATP/ADP translocase [E 81.8 73 0.0016 35.8 16.8 174 603-791 27-244 (509)
294 TIGR00939 2a57 Equilibrative N 78.9 65 0.0014 36.2 15.9 34 708-741 111-144 (437)
295 KOG3097|consensus 74.5 63 0.0014 34.3 12.9 56 533-591 70-125 (390)
296 PF09605 Trep_Strep: Hypotheti 71.7 1E+02 0.0022 30.0 14.9 132 529-670 36-183 (186)
297 KOG4830|consensus 67.8 1.1 2.4E-05 45.0 -1.3 144 515-658 46-256 (412)
298 COG2962 RarD Predicted permeas 66.3 1.7E+02 0.0037 30.4 15.6 70 592-670 58-128 (293)
299 PF01733 Nucleoside_tran: Nucl 64.7 1.8 3.8E-05 46.3 -0.7 52 307-358 252-304 (309)
300 PF02990 EMP70: Endomembrane p 59.9 30 0.00064 39.9 8.1 71 197-268 252-322 (521)
301 COG5336 Uncharacterized protei 53.8 45 0.00098 28.8 5.9 32 734-765 38-69 (116)
302 KOG2601|consensus 50.7 3.7E+02 0.0081 29.4 14.4 172 603-783 27-217 (503)
303 TIGR02185 Trep_Strep conserved 44.8 3.1E+02 0.0067 26.8 14.9 55 529-588 38-92 (189)
304 PF03547 Mem_trans: Membrane t 41.1 2.2E+02 0.0048 31.1 11.2 47 649-699 5-51 (385)
305 PF03219 TLC: TLC ATP/ADP tran 34.8 7.4E+02 0.016 28.3 30.8 144 519-668 56-205 (491)
306 COG3202 ATP/ADP translocase [E 34.7 7.3E+02 0.016 28.2 28.7 146 519-669 59-210 (509)
307 PRK15097 cytochrome d terminal 34.3 7.6E+02 0.016 28.3 14.8 35 533-570 108-142 (522)
308 KOG2601|consensus 32.9 1.5E+02 0.0033 32.2 7.3 162 201-365 25-202 (503)
309 PRK15430 putative chlorampheni 30.8 6.4E+02 0.014 26.4 17.0 35 634-671 95-130 (296)
310 PF09605 Trep_Strep: Hypotheti 30.1 1.5E+02 0.0033 28.8 6.6 28 243-270 156-183 (186)
311 PF11947 DUF3464: Protein of u 30.0 1.8E+02 0.0038 27.3 6.5 28 726-753 118-145 (153)
312 PF06645 SPC12: Microsomal sig 28.5 1.6E+02 0.0034 24.0 5.3 34 750-788 19-52 (76)
313 TIGR02185 Trep_Strep conserved 26.0 2.9E+02 0.0063 26.9 7.8 26 245-270 161-186 (189)
314 PF01925 TauE: Sulfite exporte 25.1 6.9E+02 0.015 24.9 10.9 31 446-476 122-153 (240)
315 PF07857 DUF1632: CEO family ( 24.2 5.6E+02 0.012 26.3 9.6 22 212-233 187-208 (254)
316 COG2119 Predicted membrane pro 23.8 4E+02 0.0087 25.8 7.7 36 531-566 144-179 (190)
317 PF11947 DUF3464: Protein of u 23.3 1.1E+02 0.0024 28.6 3.9 46 305-350 97-142 (153)
318 PRK15035 cytochrome bd-II oxid 20.8 1.3E+03 0.028 26.4 14.3 24 546-570 119-142 (514)
319 COG2962 RarD Predicted permeas 20.3 9.6E+02 0.021 25.1 10.2 35 193-227 59-93 (293)
No 1
>KOG2532|consensus
Probab=100.00 E-value=1.6e-32 Score=304.25 Aligned_cols=323 Identities=38% Similarity=0.732 Sum_probs=294.1
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~ 79 (817)
+|++||++.|..+|....+.++|.|++||++..++..++..+|++++.+++|++.+ . .||+++|++.+.+++++.+++
T Consensus 134 ~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~-s~~GW~sifY~~g~~g~i~~~~w 212 (466)
T KOG2532|consen 134 LRFLQGLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCE-SSLGWPSIFYVFGIVGLIWFILW 212 (466)
T ss_pred HHHHhHHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhc-cCCCCchHHHHHHHHHHHHHHHH
Confidence 59999999999999999999999999999999999999999999999999999999 7 999999999999999999999
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+.+..|+|++++..+++|++.+.++..+...
T Consensus 213 ~~~~~d~P~~h~~is~~El~~I~~~k~~~~~------------------------------------------------- 243 (466)
T KOG2532|consen 213 FLFYSDSPSKHPNISEKELKYIEKGKSEAHV------------------------------------------------- 243 (466)
T ss_pred HHHhcCCcccCCCCCHHHHHHHHhccccccc-------------------------------------------------
Confidence 9999999999999999998877665444110
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
+++.+.|+++++++|.+|.+.+..++.+++++.+..|+|.|+++++|+|..
T Consensus 244 -----------------------------~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~ 294 (466)
T KOG2532|consen 244 -----------------------------KKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVR 294 (466)
T ss_pred -----------------------------CCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChh
Confidence 111367999999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMG 318 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g 318 (817)
+.|+....+.+.+.+..+++|.++||..+| .++++.+||.+..++....+++++.+.+.++. .....+.+.+..+..|
T Consensus 295 ~~G~~salP~l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g 373 (466)
T KOG2532|consen 295 ETGFLSALPFLAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSG 373 (466)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcc
Confidence 999999999999999999999999999999 78999999999999999999999999988754 4467777777778888
Q ss_pred hccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734 319 FCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL 398 (817)
Q Consensus 319 ~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (817)
...++......+..|++.+..+|+.|++..+.+.++|.+.|.+..+
T Consensus 374 ~~~~Gf~~~~~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~---------------------------------- 419 (466)
T KOG2532|consen 374 FNISGFYKNHQDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTD---------------------------------- 419 (466)
T ss_pred cchhhhHhhhhhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCC----------------------------------
Confidence 8888888888898999999999999999999999999999887732
Q ss_pred cccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734 399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI 445 (817)
Q Consensus 399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (817)
.+.++|+.+|++.+++.+++.+++.++.+.++++|.++.
T Consensus 420 --------~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~~ 458 (466)
T KOG2532|consen 420 --------NTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKSE 458 (466)
T ss_pred --------CCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCCc
Confidence 124589999999999999999999999999999998753
No 2
>KOG2532|consensus
Probab=99.96 E-value=3.9e-28 Score=269.35 Aligned_cols=289 Identities=40% Similarity=0.750 Sum_probs=266.2
Q ss_pred cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-
Q psy11734 513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED- 591 (817)
Q Consensus 513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~- 591 (817)
++++++|++|.+++.+++..|+.+++++.|++.||||.|+++..+.++.++++++.+++.+.+++.+++.|++||++.|
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 5699999999999999999999999999999999999999999999999999999999987788899999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~ 224 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHP 224 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCC
Confidence
Q ss_pred ----------------------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH
Q psy11734 592 ----------------------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF 649 (817)
Q Consensus 592 ----------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 649 (817)
.+.|++++++++.+|.+.+..++.+++++.+..|+|+|+++++|+|..+.|++.+++.
T Consensus 225 ~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP~ 304 (466)
T KOG2532|consen 225 NISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALPF 304 (466)
T ss_pred CCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHHH
Confidence 1457899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhc
Q psy11734 650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNP 728 (817)
Q Consensus 650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (817)
+.+.+..+.+|.++||..+| .++.++.||++..+++...+++++.+.+.+.+ .+..+.++.+.....+...+......
T Consensus 305 l~~~~~k~~~g~lsD~l~~~-~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~~~ 383 (466)
T KOG2532|consen 305 LAMAIVKFVAGQLSDRLTFR-ILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYKNH 383 (466)
T ss_pred HHHHHHHHHHHHHHHHHhhc-cCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHhhh
Confidence 99999999999999999998 88899999999999999999999999988743 35677777777788788888888888
Q ss_pred cccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcccccccc
Q psy11734 729 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWNEK 802 (817)
Q Consensus 729 ~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 802 (817)
.+..|++.+..+|+.|....+.+.++|.+.|.+.++....+|+..|++.+++.+++.+.+.++.+.++++++++
T Consensus 384 ~~~apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~s~e~~~w~~~ 457 (466)
T KOG2532|consen 384 QDIAPQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFGSGEPAPWTKS 457 (466)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEeecCcccCccCC
Confidence 88899999999999999999999999999999995334467999999999999999999988888888877663
No 3
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.96 E-value=3.2e-27 Score=269.07 Aligned_cols=344 Identities=29% Similarity=0.550 Sum_probs=263.9
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ 523 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (817)
...+.+|.+..++++++.+++.||.+++.+.|.|.++.+.++ ..|. +. .+...+....|+++++.+.
T Consensus 12 ~~~~~r~~i~~~~~~~~~~~y~dr~~~~~a~~~~~~~~~~~~------~~~~---~~----~~~~~~~~~~~~~~s~~~~ 78 (465)
T TIGR00894 12 YFCSFRLFLSFLLHICNVIIIAQRICLSLTMVAMVNKENSTD------LACL---SA----ENELDNIKNPNFKWSGALQ 78 (465)
T ss_pred cccCcHHHHHHHHHHHHHHHHHHHhhheEEEEEcccCCCCCC------cccc---cc----ccccccccCCCCCCCHHHh
Confidence 456788999999999999999999999999999876221111 1111 00 0011122344899999999
Q ss_pred HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------ 591 (817)
Q Consensus 524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------ 591 (817)
|++.+.+.+++.+++++.|+++||+|||+++..+.+++++++++++++...+++.+++.|+++|++++
T Consensus 79 g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~ 158 (465)
T TIGR00894 79 GLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVK 158 (465)
T ss_pred hHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHh
Confidence 99999999999999999999999999999999999999999999876642268899999999999998
Q ss_pred -------------------------------------------------------------cC-----------------
Q psy11734 592 -------------------------------------------------------------LE----------------- 593 (817)
Q Consensus 592 -------------------------------------------------------------~~----------------- 593 (817)
..
T Consensus 159 ~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~i~ 238 (465)
T TIGR00894 159 WAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPCISKFEKKYIN 238 (465)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHH
Confidence 00
Q ss_pred -------------chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy11734 594 -------------TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSS 660 (817)
Q Consensus 594 -------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g 660 (817)
.++++++++|.+|...+..++.....+.+.+|+|.|+++++|++..+.+...+.+.+++.++.++.|
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g 318 (465)
T TIGR00894 239 SSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAG 318 (465)
T ss_pred hhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHH
Confidence 0245677888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHH
Q psy11734 661 ALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIM 740 (817)
Q Consensus 661 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 740 (817)
+++||+++|+.......|+.....+..+..+..+.......+....+..+.+.+++.+...+.......+..|+.+|++.
T Consensus 319 ~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 398 (465)
T TIGR00894 319 YLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVLINSLDLAPRFLGFIK 398 (465)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhhhchhhcChhHHHHHH
Confidence 99999987765442333344444443333332222222222344444444455555444455555667788899999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Q psy11734 741 ALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQYWN 800 (817)
Q Consensus 741 g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 800 (817)
|+.+..+++++.++|.+.|.+.|..+.++|...|.+.++..+++.+......+.++++++
T Consensus 399 g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~ 458 (465)
T TIGR00894 399 GITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWA 458 (465)
T ss_pred HHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeeeecceecCCC
Confidence 999999999999999999998886533458999999999999988877766655555554
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.96 E-value=1.7e-27 Score=248.50 Aligned_cols=304 Identities=17% Similarity=0.176 Sum_probs=260.1
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
+.+++.|+.+++..+++|...|+.|.+++.+.|.+.+ |.++|.+|
T Consensus 21 ~~y~~~r~qif~~~fiGYa~fYl~RknF~~a~p~l~e-----------------------------------~~~lsk~~ 65 (448)
T COG2271 21 KTYKRWRIQIFLSIFIGYAAFYLTRKNFNLAMPALIE-----------------------------------DGGLSKTQ 65 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccHHHHH-----------------------------------hcCCCHHH
Confidence 3457788999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-----------
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------- 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------- 591 (817)
.|++.|.+.++|+++..+.|.++||.++|+.+.+++++.++..++.++.+ |.+.+.++-++.|...|
T Consensus 66 lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~--s~~~~~~l~~lng~fQg~Gwpp~~~~i~ 143 (448)
T COG2271 66 LGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP--SLFLFAVLWVLNGWFQGMGWPPCARTIT 143 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh--HHHHHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999888888
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 144 ~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~ 223 (448)
T COG2271 144 HWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG 223 (448)
T ss_pred HHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc
Confidence
Q ss_pred ---------cCc---h-----hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHH
Q psy11734 592 ---------LET---P-----WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWL 654 (817)
Q Consensus 592 ---------~~~---~-----~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~i 654 (817)
... + .+.+++||.+|.++++..+....=+++..|.|.|+.|+.|+|...++...+++-.++++
T Consensus 224 d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~ 303 (448)
T COG2271 224 DPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLP 303 (448)
T ss_pred CchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhH
Confidence 000 1 13468899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734 655 VSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP 733 (817)
Q Consensus 655 g~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (817)
|+++.||+|||+-+.| |.+..++.++...+++..+...+++ .+....+++..+++.....-..-..+.|..|
T Consensus 304 G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~p 376 (448)
T COG2271 304 GTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVP 376 (448)
T ss_pred HHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHHHHHHHHhcccc
Confidence 9999999999986443 4455566666666666666655433 3555555555555555444444477789999
Q ss_pred -CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 734 -NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 734 -~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+..|++.|+.+.++++ |++.+....|++.|.+| |...|+++.+.++++.+++....+
T Consensus 377 K~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g---W~g~Fi~~~~~a~l~~lll~~~~~ 435 (448)
T COG2271 377 KKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG---WDGGFIVLSIAALLAILLLLPVWN 435 (448)
T ss_pred HhhccchhchhhhHHHHhhHHhcCCcceeeEecCC---CcchHHHHHHHHHHHHHHHHHHHh
Confidence 6799999999999999 99999999999999965 989999888888888777766543
No 5
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.95 E-value=2.3e-27 Score=270.25 Aligned_cols=326 Identities=31% Similarity=0.588 Sum_probs=254.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|+++|++++..+|....++.||+|++||++++++...+..+|.++++++++.+.+ . .|||++|++.+++++++.+++
T Consensus 137 ~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~-~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 137 CRVIQGLAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCE-SWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred HHHHHHHhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccCCCCeehhhhhHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999998 7 499999999999998888888
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+.+.+|+|+++++.++++++...+.... +++
T Consensus 216 ~~~~~~~p~~~~~~~~~~~~~i~~~~~~----~~~--------------------------------------------- 246 (465)
T TIGR00894 216 FVFPADDPSIHPCISKFEKKYINSSLQG----QKG--------------------------------------------- 246 (465)
T ss_pred HHHhcCCcccCCCCCHHHHHHHHhhccc----ccC---------------------------------------------
Confidence 8888888876655444444332211110 000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
+++.+.++++++++|.+|...+..++.....+.+.+|+|.|+++.+|++..
T Consensus 247 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~ 297 (465)
T TIGR00894 247 -----------------------------STRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGK 297 (465)
T ss_pred -----------------------------CCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChH
Confidence 001234688999999999999999999999999999999999999999999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
++|+....+.++..++.+++|+++||.++|+...++..++.....+..+..+..+.......+.......+.+++++.+.
T Consensus 298 ~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 377 (465)
T TIGR00894 298 ENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSG 377 (465)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhh
Confidence 99999999999999999999999999988765444444455555544433333333333222333344444455555544
Q ss_pred ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
..+.......+..|+.+|.+.|+.|+.+++++.++|.+.|.+.|..+
T Consensus 378 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~--------------------------------- 424 (465)
T TIGR00894 378 PLAGVLINSLDLAPRFLGFIKGITGLPGFIGGLIASTLAGNILSQDS--------------------------------- 424 (465)
T ss_pred hhhhhhhchhhcChhHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCC---------------------------------
Confidence 55555566678888999999999999999999999999998877531
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCc
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILP 447 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 447 (817)
..+|+..|.+.+++.+++.+++.++.+.++++|+++.+|
T Consensus 425 ---------~~~~~~~f~~~~~~~~i~~i~~~~~~~~~~~~w~~~~~~ 463 (465)
T TIGR00894 425 ---------KNVWLIVFLIMAFVNILCVIFYLIFGSAERQDWAKEEKD 463 (465)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHHeeeeecceecCCCCCccc
Confidence 126999999999999999999999988898888865443
No 6
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.95 E-value=1.9e-26 Score=262.50 Aligned_cols=300 Identities=16% Similarity=0.090 Sum_probs=234.2
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
.++.+.++.+++++++..++||..++++.|++.+ |+|+|+++.|+
T Consensus 24 ~~~~~~i~~~~~~~~~~~y~~r~~~~~~~~~i~~-----------------------------------~~~~s~~~~g~ 68 (467)
T PRK09556 24 FKPFMQSYLVVFIGYLTMYLIRKNFKAAQNDMIS-----------------------------------TYGLSTTELGM 68 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHH-----------------------------------hcCCCHHHHHH
Confidence 4567778899999999999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHH-----hhhcchHHHHHHHHHHhhhcc---------
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPL-----IAHSGPVSMTVLRFLEGVGED--------- 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~-----a~~~s~~~l~~~R~l~Gig~~--------- 591 (817)
+.+++.+++++++++.|+++||+|||+++.++++++++++++.++ ++ +++.+++.|+++|++++
T Consensus 69 ~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~ 146 (467)
T PRK09556 69 IGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSV--SLGLMIALWALSGFFQSTGGPCSYST 146 (467)
T ss_pred HHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccc--hHHHHHHHHHHHHHHHhccchHHHHH
Confidence 999999999999999999999999999999999999888887776 46 99999999999999887
Q ss_pred ----------------------------------------------------------------------cC--------
Q psy11734 592 ----------------------------------------------------------------------LE-------- 593 (817)
Q Consensus 592 ----------------------------------------------------------------------~~-------- 593 (817)
++
T Consensus 147 i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~ 226 (467)
T PRK09556 147 ITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKAEE 226 (467)
T ss_pred HHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCChhh
Confidence 00
Q ss_pred -------ch--------------h-HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHH
Q psy11734 594 -------TP--------------W-AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLI 651 (817)
Q Consensus 594 -------~~--------------~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~ 651 (817)
.+ + ++.+|+|.+|...+..++....++++..|+|.|+++.+|+|..+++...+...++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~ 306 (467)
T PRK09556 227 IFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIG 306 (467)
T ss_pred cccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHH
Confidence 00 0 1146788899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH-hhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734 652 MWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS-YVGCNTSMVAICFTIGMAFMGFCYASIRVNPID 730 (817)
Q Consensus 652 ~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (817)
+.++++++|+++||+++|+.+. .......++...+. ....+........+..+++.............|
T Consensus 307 ~~ig~~~~G~lsDr~g~r~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 376 (467)
T PRK09556 307 ALVGSLLWGWLSDLANGRRALV----------ACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVG 376 (467)
T ss_pred HHHHHHHHHHHHHHHCCCchHH----------HHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHh
Confidence 9999999999999999886421 11111112211111 122233333233333332222222222244557
Q ss_pred cCC-CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcC-C--------ccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 731 LSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQN-K--------TLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 731 ~~~-~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~-~--------g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
..| +.+|++.|+.|..+++ |++++|.+.|.+.|. . ...+|+..|+++.++.+++.+..++.+
T Consensus 377 ~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 377 FVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred hcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 788 6899999999999997 779999999999992 1 023499999999888888877776654
No 7
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=1.4e-27 Score=249.00 Aligned_cols=310 Identities=17% Similarity=0.192 Sum_probs=239.6
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhh--hhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCS--GLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~--~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+++|..+|..+|.+...++.|||++|||+..++|+.+.++|..+.|++. +++.. +.+||..|++.+++++++.++.+
T Consensus 125 ~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~-~~~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 125 VLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAF-HGGWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred HHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHh-ccchhHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999 88888 88999999999999999999999
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||+|++...++.++......+..+ ++.+.+....+
T Consensus 204 ~~~rd~Pqs~GLP~ie~~~~d~~e~~~-~~~~~~~ls~~----------------------------------------- 241 (448)
T COG2271 204 FLLRDRPQSEGLPPIEEYRGDPLEIYE-EEKENEGLTAW----------------------------------------- 241 (448)
T ss_pred HHhCCCccccCCCCHHHhhcCchhhhh-hhccCCCccHH-----------------------------------------
Confidence 999999998876555443221111100 00000000000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
..-.+.+++||.+|.+.+..++.+..-|++..|.|.|+.|.+|+|..+
T Consensus 242 --------------------------------~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~~~ 289 (448)
T COG2271 242 --------------------------------QIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSLVK 289 (448)
T ss_pred --------------------------------HHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCHHH
Confidence 112467899999999999999999999999999999999999999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~ 319 (817)
++...+..-++++.|++++|+++||+.+.+ |....++.++...+++......++. .....+.+.+.++....
T Consensus 290 a~~a~~lfE~agl~G~Ll~GwlSDklfkgr-------R~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyG 362 (448)
T COG2271 290 ANWAISLFEVAGLPGTLLAGWLSDKLFKGR-------RGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYG 362 (448)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHhcccc-------cchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999976433 2224555555555555555555433 34444444444444333
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP 397 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (817)
..........|+.| +..|++.|+.+.+.++ |++.+....|.+.|.+
T Consensus 363 PqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~-------------------------------- 410 (448)
T COG2271 363 PQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTW-------------------------------- 410 (448)
T ss_pred HHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecC--------------------------------
Confidence 33444667788888 5799999999999999 8899999999988875
Q ss_pred ccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
+|...|++..+..+++.++.+.+.+.+++
T Consensus 411 -------------gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 411 -------------GWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred -------------CCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 69999998888888777766666554433
No 8
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.94 E-value=3.9e-25 Score=234.88 Aligned_cols=300 Identities=12% Similarity=0.116 Sum_probs=257.3
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ 523 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (817)
.+++..|..++.+.++.|....++......+|++.+ |+|+|..+.
T Consensus 6 ~~~~~~~~~l~aLa~~~F~igttEfv~~gLLp~iA~-----------------------------------dl~vs~~~a 50 (394)
T COG2814 6 TARKPMWLALLALALAAFAIGTTEFVPVGLLPPIAA-----------------------------------DLGVSEGAA 50 (394)
T ss_pred cccccchHHHHHHHHHHHHHHhHHHHHHhchHHHHH-----------------------------------HcCCCHHHH
Confidence 345566788889999999999999999999999999 999999999
Q ss_pred HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------ 591 (817)
Q Consensus 524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------ 591 (817)
|++.|.|.++++++.|+...+.||+.||++++..+.++.++.+++++++ ||+.++++|++.|+..|
T Consensus 51 G~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp--~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~ 128 (394)
T COG2814 51 GQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAP--SFAVLLLARALAGLAHGVFWSIAAALAAR 128 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ------------------------------------------------------------c-------C-ch---hHHhh
Q psy11734 592 ------------------------------------------------------------L-------E-TP---WAAIL 600 (817)
Q Consensus 592 ------------------------------------------------------------~-------~-~~---~~~~l 600 (817)
+ + .+ ..+++
T Consensus 129 lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~~~~~~~~~~~~~~~l 208 (394)
T COG2814 129 LVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEISGSLPGPLRTLLRLL 208 (394)
T ss_pred HcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccCCCCCCcchhHHHHHh
Confidence 1 0 11 45688
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~ 680 (817)
|+|+++......++...+.|..++|..++++++.|+|....++....+++++.+|+.++|+++|| +.++.+
T Consensus 209 ~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l-------- 279 (394)
T COG2814 209 RRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRAL-------- 279 (394)
T ss_pred cCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHH--------
Confidence 99999999999999999999999999999999999999999999999999999999999999999 655543
Q ss_pred HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734 681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF 760 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~ 760 (817)
.....+.++.++.+.+...+.+.......+.++..............+..|+.+..+.+++....|+|...|..++|.
T Consensus 280 --~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~ 357 (394)
T COG2814 280 --IAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGL 357 (394)
T ss_pred --HHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355566666666666666566555555555444444444444455566677999999999999999999999999999
Q ss_pred hhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 761 LTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 761 ~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
+.|+.| +....+..+.+.+++.+..+...+.
T Consensus 358 v~~~~g---~~~~~~~~a~l~~~a~~~~~~~~~~ 388 (394)
T COG2814 358 VLDALG---YAATGWVGAALLLLALLLALLSARK 388 (394)
T ss_pred HHHhhc---hHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999976 8888888998888888777765443
No 9
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.94 E-value=2.4e-25 Score=233.18 Aligned_cols=307 Identities=18% Similarity=0.206 Sum_probs=267.3
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734 440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD 519 (817)
Q Consensus 440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 519 (817)
.|+...++.+++.+++.++...++++..+.+++..+.|.+ |+|+|
T Consensus 3 ~~~~~~k~~~~~~L~~S~~af~v~F~VW~l~s~l~~~i~~-----------------------------------~~~LS 47 (417)
T COG2223 3 FWEARGKRIARRNLWLSTLAFDVGFMVWTLFSPLGVFIKS-----------------------------------DFGLS 47 (417)
T ss_pred hHHhccccchhHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-----------------------------------ccCCC
Confidence 3455556677888999999999999999999999999988 99999
Q ss_pred hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc-------
Q psy11734 520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED------- 591 (817)
Q Consensus 520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~------- 591 (817)
++|.+++.++..+..++..++.|.+.||||.|++..+++++..+..+..+++. ..|++++++.+++.|++.+
T Consensus 48 ~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~GasFav~m~ 127 (417)
T COG2223 48 EGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGASFAVGMP 127 (417)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccceehcccc
Confidence 99999999999999999999999999999999999999999999999999997 1134599999999999998
Q ss_pred ------------------------------------------------------------------------------cC
Q psy11734 592 ------------------------------------------------------------------------------LE 593 (817)
Q Consensus 592 ------------------------------------------------------------------------------~~ 593 (817)
..
T Consensus 128 ~~s~~fP~~~qG~AlGI~g~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~ 207 (417)
T COG2223 128 NASFFFPKEKQGLALGIAGAGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQL 207 (417)
T ss_pred cccccCChhhhhHHHHHhccccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccc
Confidence 11
Q ss_pred -chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734 594 -TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL 672 (817)
Q Consensus 594 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 672 (817)
.+++.+.++|+.|.+++.|+....++.++..++|.|++++++.|+.+++.+.+...+.+.+.++.+|+++||+|.+++.
T Consensus 208 ~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~ 287 (417)
T COG2223 208 PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVT 287 (417)
T ss_pred hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHH
Confidence 2345578899999999999999999999999999999999999999999999999999999999999999999988754
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhc------CchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHH
Q psy11734 673 SRTNVRKVFATLGAVLPGVGALAASYVG------CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGL 746 (817)
Q Consensus 673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 746 (817)
...+..+.++........ .+....+..+.....+.+..+...+..+..++|++.|.+.|+...+
T Consensus 288 ----------~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~ 357 (417)
T COG2223 288 ----------LAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAI 357 (417)
T ss_pred ----------HHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHHHhhhhHHHHHHHHh
Confidence 366666666666666553 2345555556667777777788888889999999999999999999
Q ss_pred HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+.+|+..-|...|...|.+| ++...|+.+..+.+++.+..+....
T Consensus 358 G~lGGf~lp~~~g~~~~~tg--~~~~~f~~~~~~~~~a~v~~~~~y~ 402 (417)
T COG2223 358 GGLGGFFLPLAFGVSLDLTG--SYTGAFMLLLAFYLVALVLTWALYA 402 (417)
T ss_pred ccccccchhHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999986 4899999999999998887766533
No 10
>PRK03545 putative arabinose transporter; Provisional
Probab=99.94 E-value=1.6e-24 Score=240.91 Aligned_cols=295 Identities=13% Similarity=0.045 Sum_probs=231.0
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHH
Q psy11734 448 ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVIL 527 (817)
Q Consensus 448 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~ 527 (817)
++|..++.+.++.+....+.....+..|.+.+ |+|+|+++.|++.
T Consensus 6 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~~~~s~~~~g~~~ 50 (390)
T PRK03545 6 VAWLRVVTLALAAFIFNTTEFVPVGLLSDIAQ-----------------------------------SFHMQTAQVGLML 50 (390)
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHcchHHHHh-----------------------------------HcCCCHHHHHHHH
Confidence 35655555555545444444455566788888 9999999999999
Q ss_pred HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------------
Q psy11734 528 SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------- 591 (817)
Q Consensus 528 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------- 591 (817)
+.+.+++.+++++.|.++||+|||+++..++++.+++++++++++ |++.+++.|+++|++.+
T Consensus 51 ~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~ 128 (390)
T PRK03545 51 TIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAW--NFTVLLISRIGIAFAHAIFWSITASLAIRVAPA 128 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh
Confidence 999999999999999999999999999999999999999999999 99999999999999877
Q ss_pred --------------------------------------------------------c------C---chhHHhhcCHhHH
Q psy11734 592 --------------------------------------------------------L------E---TPWAAILSSLPVW 606 (817)
Q Consensus 592 --------------------------------------------------------~------~---~~~~~~l~~~~~~ 606 (817)
+ + ++.++.+|+|+++
T Consensus 129 ~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (390)
T PRK03545 129 GKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPSEHSGSLKSLPLLFRRPALV 208 (390)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcchHHHHHHHHhCcHHH
Confidence 1 0 1234677888888
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734 607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA 686 (817)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 686 (817)
......++.....+....+.|.|+++..|.|..+++...+...++++++++..|+++||+++|.. ..+.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~-----------~~~~ 277 (390)
T PRK03545 209 SLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFL-----------LIAI 277 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHH-----------HHHH
Confidence 77777777777777778889999998889999999999999999999999999999999987643 2333
Q ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734 687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g 766 (817)
.+.......+....++.+.......+.+.+.....+.......+..|+++++++|+.+...++|..+||.+.|.+.|+.|
T Consensus 278 ~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g 357 (390)
T PRK03545 278 ALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHLG 357 (390)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 33333333332222244444444444444444444445566667788899999999999999999999999999999976
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 767 LLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 767 ~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
++..|+..+.+.+++.+.++...+
T Consensus 358 ---~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 358 ---LSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred ---hhHHHHHHHHHHHHHHHHHHHHcc
Confidence 889999999998888888776643
No 11
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.94 E-value=4.4e-24 Score=240.68 Aligned_cols=403 Identities=14% Similarity=0.134 Sum_probs=266.5
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
+.+.++...+..++.+...+.+..++|.+.++ +|.|..+.|++.....++..+++++.|++.||+|+|+.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~--------- 90 (434)
T PRK11663 21 RRHILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYF--------- 90 (434)
T ss_pred HHHHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchh---------
Confidence 34445566666666666667778889988877 79999999999999999999999999999999999986
Q ss_pred HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc
Q psy11734 281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG 359 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g 359 (817)
+..+.++..++.+.....+ +.........+.+.+.+...+.......+..| ++|++++++.+....+|+.++|.+.+
T Consensus 91 -~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 91 -MGIGLIATGIINILFGFSS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVG 168 (434)
T ss_pred -HHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777777766665544 44444444444455555555666666677666 68999999999999999999999988
Q ss_pred eecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 360 FLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 360 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
.+.+.. +|++.|++.+++.++..++..++-+++++
T Consensus 169 ~l~~~~---------------------------------------------gw~~~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 169 AIALHY---------------------------------------------GWRYGMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHHcc---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 876653 69999998887666544433333233222
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734 440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD 519 (817)
Q Consensus 440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 519 (817)
....+ +. .+ +..+.++. .++-
T Consensus 204 ~~~~~--~~-----------------------------~~---------------------~~~~~~~~----~~~~--- 224 (434)
T PRK11663 204 AMGLP--SV-----------------------------GE---------------------WRHDALEL----AQQQ--- 224 (434)
T ss_pred hcCCC--Cc-----------------------------cc---------------------cccccccc----chhc---
Confidence 11000 00 00 00000000 0000
Q ss_pred hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh-HH
Q psy11734 520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW-AA 598 (817)
Q Consensus 520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~-~~ 598 (817)
++ .+ . +. ++.+ ..
T Consensus 225 --------------------------~~--~~--------------------~--~~----------------~~~~~~~ 238 (434)
T PRK11663 225 --------------------------EG--AG--------------------L--SR----------------KEILTKY 238 (434)
T ss_pred --------------------------cc--cC--------------------C--Ch----------------hhhHHHH
Confidence 00 00 0 00 0001 13
Q ss_pred hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
.+++|++|......++....++++..|+|.|+++.+|+|..+++...+...+++.+++++.|+++||+.+++. +..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r----~~~ 314 (434)
T PRK11663 239 VLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNR----GPM 314 (434)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCc----cHH
Confidence 5678888888888888888888899999999988889999999999999999999999999999999953320 001
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
......+.....+++..+. ..+...........+++.............|.+| +++|+++|+.+...++|+.++|.+
T Consensus 315 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~ 392 (434)
T PRK11663 315 NLIFAAGILLSVGSLWLMP--FASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYP 392 (434)
T ss_pred HHHHHHHHHHHHHHHHHcc--cccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhccc
Confidence 1111222222222222111 1122222222222222211112222345567776 789999999999999999999999
Q ss_pred HHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
.|++.|..| |...|...+++.+++.+..+...++
T Consensus 393 ~g~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~ 426 (434)
T PRK11663 393 LAKVLEIWH---WTGFFVVISIAAGISALLLLPFLNA 426 (434)
T ss_pred HHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999875 8889999988888877766655433
No 12
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.93 E-value=1.8e-24 Score=240.52 Aligned_cols=295 Identities=17% Similarity=0.194 Sum_probs=230.4
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
.+..|..+...+++.+...++ ..+++..|++.+ |+|+|.++.|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~lp~i~~-----------------------------------~~~~s~~~~g~ 48 (393)
T PRK09705 5 FPLNFMLLVLVLIGLNMRPLL-TSVGPLLPQLRQ-----------------------------------ASGMSFSVAAL 48 (393)
T ss_pred cchHHHHHHHHHHHHHcchhh-hccchhHHHHHH-----------------------------------HhCCCHHHHHH
Confidence 344555555555555544444 677888888888 99999999999
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------- 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------- 591 (817)
+.+.+.+++.+++++.|++.||+|||+++..++++++++++++++++ |++.+++.|+++|+|.+
T Consensus 49 ~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~--~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~ 126 (393)
T PRK09705 49 LTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYP--QSALLLSSALLGGVGIGIIQAVMPSVIKRRF 126 (393)
T ss_pred HHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCc--chHHHHHHHHHHHhHHHHHhhhhhHHHHHHc
Confidence 99999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred ----------------------------------------------------------cC---------chhHHhhcCHh
Q psy11734 592 ----------------------------------------------------------LE---------TPWAAILSSLP 604 (817)
Q Consensus 592 ----------------------------------------------------------~~---------~~~~~~l~~~~ 604 (817)
.. .+.++.+++|+
T Consensus 127 ~~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 206 (393)
T PRK09705 127 QQRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSAREVASSHKTTTTPVRVVFTPR 206 (393)
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCcCCcccccCHh
Confidence 00 11234567888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734 605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL 684 (817)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 684 (817)
.|...+..++....++++..|+|.|+++ +|.+..+++...++..+++++|++..|++.||+++|+.+ ..
T Consensus 207 ~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~----------~~ 275 (393)
T PRK09705 207 AWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLL----------ML 275 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHH----------HH
Confidence 8888888888888999999999999987 799999999999999999999999999999999987543 24
Q ss_pred HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccC-C-CchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734 685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS-P-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 762 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~ 762 (817)
+..+..++.+.+...+.+.... ...+.+.+.+...+.......+.. | +++++..|+.+..+++++.++|.+.|++.
T Consensus 276 ~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~ 353 (393)
T PRK09705 276 ALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLR 353 (393)
T ss_pred HHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4444444444443333222221 122333444444454444444444 4 67999999999999999999999999999
Q ss_pred cCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 763 QNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 763 ~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
|..|+ |...|.+.+++.++..+..+.+++
T Consensus 354 ~~~g~--~~~~~~~~~~~~~~~~~~~~~~~~ 382 (393)
T PRK09705 354 SISGN--YLMDWAFHALCVVGLMIITLRFAP 382 (393)
T ss_pred HHhCC--chHHHHHHHHHHHHHHHHHHHhcc
Confidence 99853 788888888887777666655543
No 13
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.93 E-value=2.7e-24 Score=236.99 Aligned_cols=310 Identities=11% Similarity=0.050 Sum_probs=244.6
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccc
Q psy11734 435 SGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDA 514 (817)
Q Consensus 435 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (817)
+|+++.|+++-++-.++.+.+.++++++.+.+.+.+++..+.+.+ +
T Consensus 18 pe~~~~w~~~~~~~a~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~----------------------------------~ 63 (462)
T PRK15034 18 PENPAFWENKGKHIARRNLWISVSCLLLAFCVWMLFSAVTVNLNK----------------------------------I 63 (462)
T ss_pred CCChHHHhhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------------------h
Confidence 666677877767777889999999999999999999998888754 2
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh-----hhcchHHHHHHHHHHhhh
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-----AHSGPVSMTVLRFLEGVG 589 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a-----~~~s~~~l~~~R~l~Gig 589 (817)
|+|+|++|.+++.+++.+++++++++.|.+.||+|+|+++.++++++++.+++.+++ + |++.+++.|++.|++
T Consensus 64 ~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~--s~~~lli~r~l~Gig 141 (462)
T PRK15034 64 GFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNT--PFGIFIVIALLCGFA 141 (462)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCC--CHHHHHHHHHHHHHH
Confidence 799999999999999999999999999999999999999999999999999999987 7 999999999999998
Q ss_pred cc------------------------------------------------------------------------------
Q psy11734 590 ED------------------------------------------------------------------------------ 591 (817)
Q Consensus 590 ~~------------------------------------------------------------------------------ 591 (817)
.+
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~ 221 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLL 221 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHH
Confidence 55
Q ss_pred -----------c-----C---chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHH
Q psy11734 592 -----------L-----E---TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIM 652 (817)
Q Consensus 592 -----------~-----~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~ 652 (817)
+ + .+.++++|+|+.|.+.+.+++....+.++..++|.|+++.+ +.........+..+.+
T Consensus 222 iv~~i~~~~~~~~~~~~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~~l~~l~~ 299 (462)
T PRK15034 222 AIATIAAWSGMNDIASSRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLAFFGPFIG 299 (462)
T ss_pred HHHHHHHHHhCCCccccccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHHHHHHHHH
Confidence 0 0 11345788999999999999999999999999999998854 4433433344567889
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH-HHhhcC----chHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734 653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA-ASYVGC----NTSMVAICFTIGMAFMGFCYASIRVN 727 (817)
Q Consensus 653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (817)
.+.++++|+++||+|+++++ .+++....++... +...+. +.+.....+.....+.+..+...+..
T Consensus 300 ~l~rplgG~LADRiG~~~vl----------~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ 369 (462)
T PRK15034 300 AIARSVGGAISDKFGGVRVT----------LINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQM 369 (462)
T ss_pred HHHHHhhHHHHHhcCchHHH----------HHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHh
Confidence 99999999999999988753 2444433333322 112221 22333333333444445555555555
Q ss_pred ccccCCC----------------------chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHH
Q psy11734 728 PIDLSPN----------------------FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISN 785 (817)
Q Consensus 728 ~~~~~~~----------------------~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~ 785 (817)
+.+++|+ +.|.+.|+.+..+.+|+++-|.+.|...+.+|. +...|+...+..++|.
T Consensus 370 ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~--~~~~~~~~~~~~~~~~ 447 (462)
T PRK15034 370 IAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGS--PVGAMKVFLIFYIVCV 447 (462)
T ss_pred hHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCC--cHHHHHHHHHHHHHHH
Confidence 5555553 688999999999999999999999999988854 8899999999999999
Q ss_pred HHHHHhccC
Q psy11734 786 VFFVLFGSG 794 (817)
Q Consensus 786 ~~~~~~~~~ 794 (817)
++.++...+
T Consensus 448 ~~~w~~y~r 456 (462)
T PRK15034 448 LLTWLVYGR 456 (462)
T ss_pred HHHHHHhcc
Confidence 888877433
No 14
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.93 E-value=7.6e-24 Score=241.02 Aligned_cols=404 Identities=12% Similarity=0.058 Sum_probs=261.7
Q ss_pred HHhhchhHHHHHHH---HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734 198 AILYSLPVWSLIIS---EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR 274 (817)
Q Consensus 198 ~l~~~~~~~~~~i~---~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~ 274 (817)
..+++++.+..... .++.....+....+.|.+ ++.+|.|..+.+++.....++..++.++.|+++||+|+|+.
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~--- 103 (476)
T PLN00028 28 FSFARPHMRAFHLSWISFFTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYG--- 103 (476)
T ss_pred cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHH---
Confidence 34555554433333 333444444444445544 55589999999998888889999999999999999999985
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734 275 TNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV 353 (817)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~ 353 (817)
+..+.++..++.+...+.. +.........+.+.+.+...+ ......+..| ++||.++|+.+...++|+.+
T Consensus 104 -------~~~~~~~~~~~~~~~~~~~-s~~~l~~~r~l~G~~~~~~~~-~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~ 174 (476)
T PLN00028 104 -------SAFLLMLTAPAVFCMSLVS-SATGFIAVRFFIGFSLATFVS-CQYWMSTMFNGKIVGTANGIAAGWGNLGGGV 174 (476)
T ss_pred -------HHHHHHHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhhHH-HHHHHHHhcChhheeHHHHHHHHHHHHHHHH
Confidence 5566666666666555554 433333333333333332222 2334556555 79999999999999999988
Q ss_pred cccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734 354 APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF 433 (817)
Q Consensus 354 ~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 433 (817)
++.+.+.+.+...... ..+..+||+.|++.+++.++..++..++
T Consensus 175 ~~~~~~~i~~~~~~~~------------------------------------~~~~~gWr~~f~i~g~l~l~~~l~~~~~ 218 (476)
T PLN00028 175 TQLLMPLVFPLIKDAG------------------------------------APSFTAWRIAFFVPGLLHIIMGILVLTL 218 (476)
T ss_pred HHHHHHHHHHHHHhcC------------------------------------CcchhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 8887765443211000 0012379999999988877666555554
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccc
Q psy11734 434 GSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLD 513 (817)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (817)
.+++++.. . .+ ..+
T Consensus 219 ~~~~p~~~--~-~~-----------------------------~~~---------------------------------- 232 (476)
T PLN00028 219 GQDLPDGN--Y-RE-----------------------------LKK---------------------------------- 232 (476)
T ss_pred cCcCCCCc--h-hh-----------------------------HHh----------------------------------
Confidence 43322110 0 00 000
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC
Q psy11734 514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE 593 (817)
Q Consensus 514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~ 593 (817)
+-. . + ++ +. .
T Consensus 233 -~~~--~-------------------------~---~~-----------------------~~----------------~ 242 (476)
T PLN00028 233 -SGT--M-------------------------P---KD-----------------------SF----------------S 242 (476)
T ss_pred -cCc--c-------------------------c---cc-----------------------cH----------------H
Confidence 000 0 0 00 00 0
Q ss_pred chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy11734 594 TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILS 673 (817)
Q Consensus 594 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~ 673 (817)
..+++.++++++|.+.+.+++.....+.+..+.|.|+.+.+|++..+++.+.+...++++++++++|+++||++||...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~- 321 (476)
T PLN00028 243 KVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGM- 321 (476)
T ss_pred HHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCc-
Confidence 1245667888888888887777777788889999999988899999999999999999999999999999999987431
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhH
Q psy11734 674 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMV 753 (817)
Q Consensus 674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 753 (817)
..|++.......+.+++++++...+ +....+....+.+++.+...+..+....+..|+++|++.|+.+..+++|+.+
T Consensus 322 --~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i 398 (476)
T PLN00028 322 --RGRLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMILFSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVL 398 (476)
T ss_pred --chhHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHHHHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHH
Confidence 2245555555555544444443332 3333333334444444445555666677788899999999998888888888
Q ss_pred HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 754 APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 754 ~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
+|.+.+ ..+..+|+..|+..+++.+++.++.++.+.+
T Consensus 399 ~~~l~~----~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~ 435 (476)
T PLN00028 399 TQLLFF----TGSSYSTETGISLMGVMIIACTLPVAFIHFP 435 (476)
T ss_pred HHHHHH----hcCCccHhhHHHHHHHHHHHHHHHHHheecc
Confidence 887754 2222358899999999988888877776533
No 15
>PRK03699 putative transporter; Provisional
Probab=99.93 E-value=6.5e-24 Score=236.35 Aligned_cols=300 Identities=14% Similarity=0.073 Sum_probs=239.9
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
++||++.+.++++++....+...++...|++.+ |+|+|+++.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-----------------------------------~~~~s~~~~g~~ 47 (394)
T PRK03699 3 SNRIKLTWISFLSYALTGALVIVTGMVMGPIAE-----------------------------------YFNLPVSSMSNT 47 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhhhHHHHH-----------------------------------HhCCCHHHHHHH
Confidence 567888889999999999999999999999998 999999999999
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------- 591 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------- 591 (817)
.+.+.+++.+++++.|++.||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+
T Consensus 48 ~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~--~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~ 125 (394)
T PRK03699 48 FTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSH--SLALFSIAMFVLGVVSGITMSIGTFLITHVYE 125 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcc--hHHHHHHHHHHHHHhhHhhccchhHHhhhhcc
Confidence 9999999999999999999999999999999999999999999999 99999999999999887
Q ss_pred --------------------------------------------------------cCch---------hH---HhhcCH
Q psy11734 592 --------------------------------------------------------LETP---------WA---AILSSL 603 (817)
Q Consensus 592 --------------------------------------------------------~~~~---------~~---~~l~~~ 603 (817)
.+.| .+ +...+|
T Consensus 126 ~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 205 (394)
T PRK03699 126 GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPALGKHAPKADKPVAKEKWGI 205 (394)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCccccccCccccCccccccCCh
Confidence 0000 00 011235
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734 604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT 683 (817)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 683 (817)
+++...+..++....++.+..|+|.|+++.+|+|+.+++.+.+...++..+|+++.|+++||+++|+.+ .
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l----------~ 275 (394)
T PRK03699 206 GVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRIL----------T 275 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHH----------H
Confidence 567777777888888889999999999998999999999999999999999999999999999988653 2
Q ss_pred HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
....+..+.+.++...+ +........+..+++.+..++.......+..|+.+++..|......++|+.++|.+.|++.|
T Consensus 276 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~ 354 (394)
T PRK03699 276 VLAGLALVLMYLFVNTD-DPSHLLYAILGLGFFSSAIYTTIITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVA 354 (394)
T ss_pred HHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 33333334444443333 34333344444555555555666666667777777888899999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ 797 (817)
Q Consensus 764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 797 (817)
..| ++..++..+++..++.+.+....+.+|+
T Consensus 355 ~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (394)
T PRK03699 355 HFG---LQAALLTANGLYAVVFVMCILLGFVSKH 385 (394)
T ss_pred HhC---chhhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 875 6788888888877776666665444443
No 16
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.93 E-value=4.7e-24 Score=238.47 Aligned_cols=288 Identities=18% Similarity=0.212 Sum_probs=221.9
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
+|.+|.+..+++++++.+++||.+++.+.|.+.+ |+|+|+++.|+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-----------------------------------~~~~s~~~~g~ 47 (412)
T TIGR02332 3 KKLFRRLIIFLFILFIFSFLDRINIGFAGLTMGK-----------------------------------DLGLSATMFGL 47 (412)
T ss_pred eeehhHHHHHHHHHHHHHHhhhhhHHHHHHhhHh-----------------------------------hcCCCHHHHHH
Confidence 3457889999999999999999999999999888 99999999999
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------- 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------- 591 (817)
+.+++.+++++++++.|+++||+|||+++..++++++++++++++++ |++.+++.|+++|++.+
T Consensus 48 ~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (412)
T TIGR02332 48 AATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFAT--GPESLYLLRILVGIAEAGFLPGILLYLTFWF 125 (412)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHhhHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999 99999999999999998
Q ss_pred ----------------------------------------------------------------cCch----h-----H-
Q psy11734 592 ----------------------------------------------------------------LETP----W-----A- 597 (817)
Q Consensus 592 ----------------------------------------------------------------~~~~----~-----~- 597 (817)
++.+ + +
T Consensus 126 ~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~ 205 (412)
T TIGR02332 126 PAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKK 205 (412)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHH
Confidence 0000 0 0
Q ss_pred -------------------------------HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH-hCCChhHHHHHH
Q psy11734 598 -------------------------------AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV-IGLSVAENGVLS 645 (817)
Q Consensus 598 -------------------------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~-~g~s~~~~~~~~ 645 (817)
+.+++|.+|...+.+++....++++.+|+|.|+++. .|.+..+++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~ 285 (412)
T TIGR02332 206 ALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREIFTPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLA 285 (412)
T ss_pred HHHHHHHhccccccccccccccccccHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHh
Confidence 001234566677778888888999999999999883 467888899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhh
Q psy11734 646 ALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIR 725 (817)
Q Consensus 646 ~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 725 (817)
.+..+++.+|++..|+++||+++|+.. .........+.+++..... +............++.....+..+
T Consensus 286 ~~~~l~~~~g~l~~g~l~dr~~~r~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~ 355 (412)
T TIGR02332 286 AIPQFCTIFGMIWWSRHSDRLKERKHH---------TALPYLFAAAGWLLASATD-HNLIQLLGIIMASMGSFSAMAIFW 355 (412)
T ss_pred hHHHHHHHHHHHHHHHHhcccCccHHH---------HHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHHHHHhhhhhhHHH
Confidence 999999999999999999999976421 1122233333332222222 222222222222222222223333
Q ss_pred hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHH
Q psy11734 726 VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLF 782 (817)
Q Consensus 726 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~ 782 (817)
....+..| ++|+++.|+.+..+++|++++|.+.|.+.|..| +|+..++.++++.+
T Consensus 356 ~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g--~~~~~~~~~~~~~~ 411 (412)
T TIGR02332 356 TTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG--SFNSGLWFVAALLV 411 (412)
T ss_pred hhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC--CCchhHHHHHHHHh
Confidence 44456666 789999999999999999999999999999874 38888877666543
No 17
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.92 E-value=3.9e-23 Score=232.04 Aligned_cols=384 Identities=13% Similarity=0.043 Sum_probs=260.8
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734 195 PWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR 274 (817)
Q Consensus 195 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~ 274 (817)
|++.+.|||++....+..++............|.+.++ .+.++.+.|+......++..+++++.|+++||++||+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~--- 84 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKL--- 84 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceE---
Confidence 34455679999988888888888888888889988877 57799999999999999999999999999999999986
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhh---cc-CCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhh
Q psy11734 275 TNVRKVFATLGAVLPGVGALAAS---YV-GCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCV 349 (817)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~l 349 (817)
+..+..+..++...+. +. .++.+.......+.+.+.+...+.......+.. +++++++.++.+...++
T Consensus 85 -------l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (417)
T PRK10489 85 -------ILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL 157 (417)
T ss_pred -------EEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH
Confidence 3444443333333221 11 223334444444444444444455555555544 47899999999999999
Q ss_pred cccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhh
Q psy11734 350 SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVF 429 (817)
Q Consensus 350 g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~ 429 (817)
|..+||.+.+.+.+.. +|++.|++.++..+++.++
T Consensus 158 g~~~g~~l~g~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~ 192 (417)
T PRK10489 158 GSVISPALGGLLIAAG---------------------------------------------GVAWNYGLAAAGTFITLLP 192 (417)
T ss_pred HHHhHHHHHHHHHHHH---------------------------------------------hhHHHHHHHHHHHHHHHHH
Confidence 9999999999887654 5888888877776666555
Q ss_pred heeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccc
Q psy11734 430 FVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTY 509 (817)
Q Consensus 430 ~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (817)
...+++.++++ ++ + +
T Consensus 193 ~~~l~~~~~~~--~~--~-------------------------------~------------------------------ 207 (417)
T PRK10489 193 LLRLPALPPPP--QP--R-------------------------------E------------------------------ 207 (417)
T ss_pred HHhCCCCCCCC--cc--c-------------------------------c------------------------------
Confidence 44332211100 00 0 0
Q ss_pred ccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhh
Q psy11734 510 TTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVG 589 (817)
Q Consensus 510 ~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig 589 (817)
++.. + .
T Consensus 208 ----~~~~----~-----------------------------------------------~------------------- 213 (417)
T PRK10489 208 ----HPLR----S-----------------------------------------------L------------------- 213 (417)
T ss_pred ----cchH----H-----------------------------------------------H-------------------
Confidence 0000 0 0
Q ss_pred cccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 590 EDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 590 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
.++++.++++|.++...+..++.. ...+...+.|.|+++.+|.++.+.+.+.+...++.+++.++.+++.||.+++
T Consensus 214 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~ 289 (417)
T PRK10489 214 ---LAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG 289 (417)
T ss_pred ---HHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc
Confidence 012334566676655554444333 3456778899999998999999999999999999999999999999986554
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH
Q psy11734 670 DILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC 748 (817)
Q Consensus 670 ~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 748 (817)
+.+ ..+..+..++++++...+ +.+.......+.+.+.+...+...+..++..| +.||+++|+.+...+
T Consensus 290 ~~l----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 358 (417)
T PRK10489 290 LLM----------LLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNV 358 (417)
T ss_pred hHH----------HHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 432 344455555555544433 34444444444555555545555577788888 679999999999999
Q ss_pred HHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 749 VSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 749 ~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
+|+.++|.+.|.+.|..| +...+...+++.++..++....
T Consensus 359 ~g~~~g~~l~G~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 359 TGDAIGAALLGGLGAMMT---PVASASASGFGLLIIGVLLLLV 398 (417)
T ss_pred hhHhHHHHHHHHHHHHhc---hhhHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999875 5566666666555544444333
No 18
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.92 E-value=3.8e-23 Score=232.97 Aligned_cols=296 Identities=12% Similarity=0.118 Sum_probs=214.4
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc---CChhh
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD---WDERT 522 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~s~~~ 522 (817)
.++++..+..++++++++++|+..++.+.|.+.+ |++ .+..+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~-----------------------------------~~~~~~~~~~~ 61 (432)
T PRK10406 17 TRRRIWAIVGASSGNLVEWFDFYVYSFCSLYFAH-----------------------------------IFFPSGNTTTQ 61 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCCCchHH
Confidence 3456667778889999999999999999998888 763 55665
Q ss_pred HHHHHHHHHHHHH---HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhcc
Q psy11734 523 QGVILSAFYYGYI---LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGED 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~---i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~~ 591 (817)
.+...+.+..++. ++++++|+++||+|||+++..++++++++++++++++ ++. .++++|+++|+|.|
T Consensus 62 ~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~g~g 139 (432)
T PRK10406 62 LLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLP--GYETIGTWAPALLLLARLFQGLSVG 139 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcC--CchhHHHHHHHHHHHHHHHHHhhhh
Confidence 5555555555555 9999999999999999999999999999999999998 764 59999999999988
Q ss_pred -------------------------------------------------------------------------------c
Q psy11734 592 -------------------------------------------------------------------------------L 592 (817)
Q Consensus 592 -------------------------------------------------------------------------------~ 592 (817)
+
T Consensus 140 ~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~~~~~~~ 219 (432)
T PRK10406 140 GEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALWLRRQLD 219 (432)
T ss_pred hhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHhcCC
Confidence 0
Q ss_pred C------------chhHHhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHH
Q psy11734 593 E------------TPWAAILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSS 659 (817)
Q Consensus 593 ~------------~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~ 659 (817)
+ .++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|++..+.+.......+...++.++.
T Consensus 220 e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~ 299 (432)
T PRK10406 220 ETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLI 299 (432)
T ss_pred CCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 124457777777776665554 367788999999999998889999999988888888889999999
Q ss_pred HHHHhhhhcccccccchhhHHHHHHHHHHHHHHHH-HHH-hh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cc
Q psy11734 660 SALADYLIVRDILSRTNVRKVFATLGAVLPGVGAL-AAS-YV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NF 735 (817)
Q Consensus 660 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 735 (817)
|+++||++||+.+ ..+..+..+... .+. .. ..+.........+..+..+...+..+...+|.+| +.
T Consensus 300 G~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~ 369 (432)
T PRK10406 300 GALSDKIGRRTSM----------LCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEMFPAQV 369 (432)
T ss_pred HHHHHHcCchHHH----------HHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 9999999987642 122222212211 111 11 1123322222222333333334455677889998 78
Q ss_pred hHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 736 SGTIMALSNGLGCV-SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 736 ~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
|+++.|+.+..++. .+...|.+.+.+ +..+ .|...++..++..+++.+..++.
T Consensus 370 r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g--~~~~~~~~~~~~~~i~~~~~~~l 423 (432)
T PRK10406 370 RALGVGLSYAVANALFGGSAEYVALSL-KSIG--METAFFWYVTLMAVVAFLVSLML 423 (432)
T ss_pred cchhhhHHHHHHHHHHHhHHHHHHHHH-HHhC--CCcHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988775 355688888854 5543 25566666666666666665554
No 19
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.92 E-value=3.2e-23 Score=231.94 Aligned_cols=295 Identities=20% Similarity=0.125 Sum_probs=233.4
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
.+++|.++.++++..+...+|+..+++..|.+.+ |+|+|+++.|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~g~ 54 (406)
T PRK11551 10 SSRLALTIGLCFLVALLEGLDLQSAGVAAPRMAQ-----------------------------------EFGLDVAQMGW 54 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHHH
Confidence 3488999999999999999999999999999988 99999999999
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------- 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------- 591 (817)
+.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+
T Consensus 55 ~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~ 132 (406)
T PRK11551 55 AFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAW--DFPSLLVARLLTGVGLGGALPNLIALTSEAV 132 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999 99999999999999987
Q ss_pred ----------------------------------------------------------cCch---------------hHH
Q psy11734 592 ----------------------------------------------------------LETP---------------WAA 598 (817)
Q Consensus 592 ----------------------------------------------------------~~~~---------------~~~ 598 (817)
++.+ .++
T Consensus 133 ~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 212 (406)
T PRK11551 133 GPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQRAPVLRA 212 (406)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhhhhhHHH
Confidence 0000 011
Q ss_pred hhcC---HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734 599 ILSS---LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT 675 (817)
Q Consensus 599 ~l~~---~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 675 (817)
.+++ ++.+......++.....+....|.|.|+++ .|++..+.+...+...++.+++++..|+++||+++|+.+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~--- 288 (406)
T PRK11551 213 LFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVV--- 288 (406)
T ss_pred HhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH---
Confidence 1221 223444455556666777888899999987 699999999999999999999999999999999987643
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHH
Q psy11734 676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA 754 (817)
Q Consensus 676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~ 754 (817)
..+.....++++.+...+ +.+.......+.+++.....+.......|..| ++|+++.|+.+...++++.++
T Consensus 289 -------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g 360 (406)
T PRK11551 289 -------LLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAG 360 (406)
T ss_pred -------HHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHH
Confidence 234444444444444433 44444444444444444555666677778777 789999999999999999999
Q ss_pred HHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 755 PLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 755 p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
|.+.|.+.|+.+ ++...++....+.+++.+..+..
T Consensus 361 ~~~~g~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 361 PLLAGQLLALGR--STVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hhhHhhhhccCC--chHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999763 37777777777766666665554
No 20
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.92 E-value=3.3e-23 Score=234.87 Aligned_cols=307 Identities=18% Similarity=0.190 Sum_probs=231.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
.++++|.++..+++.+...++||..++...|.+.+ + |+|+++.|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~-----------------------------------~-g~s~~~~g 66 (452)
T PRK11273 23 YRRLRWQIFLGIFFGYAAYYLVRKNFALAMPYLVE-----------------------------------Q-GFSRGDLG 66 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHH-----------------------------------c-CCCHHHHH
Confidence 45677888888889999999999999999988877 8 99999999
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHHHHHHHHHHhhhcc-----------
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVSMTVLRFLEGVGED----------- 591 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~l~~~R~l~Gig~~----------- 591 (817)
++.+.+.+++++++++.|+++||+|||+++..+.++++++.+++++++ ..+++.+++.|+++|++.+
T Consensus 67 ~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~ 146 (452)
T PRK11273 67 FALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMV 146 (452)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHH
Confidence 999999999999999999999999999999999999999999998863 1167789999999998887
Q ss_pred --------------------------------------------------------------cCc---------------
Q psy11734 592 --------------------------------------------------------------LET--------------- 594 (817)
Q Consensus 592 --------------------------------------------------------------~~~--------------- 594 (817)
++.
T Consensus 147 ~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 226 (452)
T PRK11273 147 HWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYKND 226 (452)
T ss_pred HhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhhhc
Confidence 000
Q ss_pred -------------hhH-----HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734 595 -------------PWA-----AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS 656 (817)
Q Consensus 595 -------------~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 656 (817)
+.+ .++|+|.+|...+..++.....+++..|+|.|++++.|++..+++....+..++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~ 306 (452)
T PRK11273 227 YPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGT 306 (452)
T ss_pred cccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 011 25577888988888888888889999999999999889999999998888999999999
Q ss_pred HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-C
Q psy11734 657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-N 734 (817)
Q Consensus 657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 734 (817)
++.|+++||+++++. +...+..+.+..+..+.+.... .+...........+...............|..| +
T Consensus 307 ~~~G~l~dr~~~~r~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~ 379 (452)
T PRK11273 307 LLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKK 379 (452)
T ss_pred HHHHHHHHHHccCCc-------chHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChh
Confidence 999999999954321 1111122222222222222221 122222222222222221222222344567777 7
Q ss_pred chHHHHHHHHHHHHHHHhH-HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734 735 FSGTIMALSNGLGCVSGMV-APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ 797 (817)
Q Consensus 735 ~~g~~~g~~~~~~~~g~~i-~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 797 (817)
.+|+++|+.+...++++.+ +|.+.|.+.|..| |+..|++++++++++++....+.+.+++
T Consensus 380 ~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g---~~~~f~~~~~~~~~~~~~~~~~~~~~~~ 440 (452)
T PRK11273 380 AAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEKR 440 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc---chHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 8999999999999998765 7999999999976 8899998888888887777766555443
No 21
>PRK10504 putative transporter; Provisional
Probab=99.92 E-value=5e-22 Score=226.81 Aligned_cols=404 Identities=14% Similarity=0.107 Sum_probs=266.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734 203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA 282 (817)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~ 282 (817)
+.++...+..++.....+.+..++|.+.++ +|.|+.+.+++.....++..++.++.|+++||+|||+. .
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~ 78 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNI----------F 78 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH----------H
Confidence 457788888888888888888999999887 89999999999999999999999999999999999985 4
Q ss_pred HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734 283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
..+..+..++.+.....+ +.........+.+.+.+...+.......+..| ++++++.|+.+....+|..++|.+.|.+
T Consensus 79 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l 157 (471)
T PRK10504 79 FTAIVLFTLGSLFCALSG-TLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLL 157 (471)
T ss_pred HHHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 555555555555444433 44444555555555555555656666666555 7899999999999999999999999988
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
.++. +|++.|++...+..++.+......++.+..
T Consensus 158 ~~~~---------------------------------------------gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~- 191 (471)
T PRK10504 158 VEYA---------------------------------------------SWHWIFLINIPVGIIGAIATLMLMPNYTMQ- 191 (471)
T ss_pred Hhhc---------------------------------------------cHHHHHHHHHHHHHHHHHHHHHhCCCcccc-
Confidence 7754 699999998877776666554443322211
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
.++.++.-......+.....
T Consensus 192 ---~~r~~~~~~~~~~~~~~~~~--------------------------------------------------------- 211 (471)
T PRK10504 192 ---TRRFDLSGFLLLAVGMATLT--------------------------------------------------------- 211 (471)
T ss_pred ---CCCCChHHHHHHHHHHHHHH---------------------------------------------------------
Confidence 01111111111111111000
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
+.. .+ .++.|.........++.++..+......+.. . ..+....+++|
T Consensus 212 ------------~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~-~~~~~~~~l~~ 259 (471)
T PRK10504 212 ------------LAL----DG--SKGLGLSPLAIAGLVAVGVVALLLYLLHARN-------------N-NRALFSLKLFR 259 (471)
T ss_pred ------------HHH----hc--CCcCCcchHHHHHHHHHHHHHHHHHHHHHhc-------------C-CCCccCHHHhc
Confidence 000 00 0000111122222222222222221111000 0 00111235789
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
||+++......++..........+.|.|+++..|.++.++++......++..++.++.|+++||+|+|+.+
T Consensus 260 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~--------- 330 (471)
T PRK10504 260 TRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVL--------- 330 (471)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH---------
Confidence 99999888888888888777778899999988899999999998888889999999999999999987653
Q ss_pred HHHHHHHHHHHHHHHHhhcC-c-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHH
Q psy11734 682 ATLGAVLPGVGALAASYVGC-N-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTV 758 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~ 758 (817)
..+..+..+..+++.+... + .+......++.+.+.+..++.......+..| +.+++++|+.++.+++|..++|.+.
T Consensus 331 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~ 409 (471)
T PRK10504 331 -VATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIA 409 (471)
T ss_pred -HHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 3455545554444444321 2 2222233334445555555666666656665 8899999999999999999999999
Q ss_pred HHhhcCCc
Q psy11734 759 GFLTQNKT 766 (817)
Q Consensus 759 g~~~~~~g 766 (817)
|.+.+..+
T Consensus 410 g~ll~~~g 417 (471)
T PRK10504 410 GLLLGLFG 417 (471)
T ss_pred HHHHHHhh
Confidence 99988754
No 22
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.91 E-value=2.1e-24 Score=229.35 Aligned_cols=285 Identities=15% Similarity=0.186 Sum_probs=242.6
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|++.|+..|..++.+.++..|..|++||++++++...+..++.++|.++|.++.+ .+|||+.|++.++++++..+..+
T Consensus 107 aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~-~~GWR~~F~~ia~l~ll~~~~~~ 185 (394)
T COG2814 107 ARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQ-LFGWRATFLAIAVLALLALLLLW 185 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+| |++.+...+.
T Consensus 186 ~~lP--~~~~~~~~~~---------------------------------------------------------------- 199 (394)
T COG2814 186 KLLP--PSEISGSLPG---------------------------------------------------------------- 199 (394)
T ss_pred HhCC--CccCCCCCCc----------------------------------------------------------------
Confidence 9888 2111100000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+..+..+++|+|+++...+..++...+.|+..+|+-++++++.|+|...
T Consensus 200 -------------------------------~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~ 248 (394)
T COG2814 200 -------------------------------PLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA 248 (394)
T ss_pred -------------------------------chhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH
Confidence 0112568899999999999999999999999999999999999999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.++....+++++++|..++|+++|| +.|+. ......+..+.+..+.+..++.........+.++.....
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~----------l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~ 317 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPRRA----------LIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA 317 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cchhH----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh
Confidence 9999999999999999999999999 77664 566666667777777777666666666666666666666
Q ss_pred cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccc
Q psy11734 321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTV 400 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (817)
.+.......+..|+++..+.+++....|+|.+.|..++|.+.|+.
T Consensus 318 ~~~~~~~~a~~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~----------------------------------- 362 (394)
T COG2814 318 LQGLQTRLARLAPDAADLAGSLNVAAFNLGIALGAALGGLVLDAL----------------------------------- 362 (394)
T ss_pred hhHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----------------------------------
Confidence 666666667777899999999999999999999999999999985
Q ss_pred cccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 401 GFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 401 ~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
++....+..+++.+++..+.+...+.+++
T Consensus 363 ----------g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 363 ----------GYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred ----------chHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 68999999999999999888776655443
No 23
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.91 E-value=7.4e-22 Score=220.37 Aligned_cols=381 Identities=15% Similarity=0.102 Sum_probs=252.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
.+++....+..++.....+....++|.++++ +|.|+.+.|+......++..++.++.|++.||+|||+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~---------- 80 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKT---------- 80 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH----------
Confidence 4566777777777777777777888998866 79999999999999999999999999999999999986
Q ss_pred HHHHhHHHHHHHHhhh---ccCCChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcc-ccccc
Q psy11734 282 ATLGAVLPGVGALAAS---YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSG-MVAPL 356 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~-~~~~~ 356 (817)
...+..+..++..... ...++.........+.+.+.+...+.......+ .++++|++++|+.+....+|. ..+|.
T Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~ 160 (402)
T TIGR00897 81 MMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSY 160 (402)
T ss_pred HHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566666555544332 222233333333333333333333333333444 566899999999999999886 57888
Q ss_pred ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
+.+.+.+.. +|+..++.......++.++..++.++
T Consensus 161 ~~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (402)
T TIGR00897 161 YSSYAIPAF---------------------------------------------GEMNTLWSALAFVLTGGVIALFSNKD 195 (402)
T ss_pred HHHhccccc---------------------------------------------chHHHHHHHHHHHHHHHHHHHhccCC
Confidence 877776654 23333333332222333333333222
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc
Q psy11734 437 EVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF 516 (817)
Q Consensus 437 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (817)
++++.+++ + + ++.
T Consensus 196 ~~~~~~~~--~-------------------------------~----------------------------------~~~ 208 (402)
T TIGR00897 196 IFTPQHMQ--T-------------------------------R----------------------------------EKF 208 (402)
T ss_pred CCCccccc--C-------------------------------C----------------------------------cch
Confidence 21110000 0 0 000
Q ss_pred cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh
Q psy11734 517 DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW 596 (817)
Q Consensus 517 ~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~ 596 (817)
++ . .+++
T Consensus 209 --~~--~---------------------------------------------------------------------~~~~ 215 (402)
T TIGR00897 209 --SE--L---------------------------------------------------------------------GKAA 215 (402)
T ss_pred --hh--H---------------------------------------------------------------------HHHH
Confidence 00 0 0113
Q ss_pred HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734 597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~ 676 (817)
++++|+|++|...+..++.....+++.+|.|.|+++ +|++..+.+.......+++.++++..|+++||++||+..
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~---- 290 (402)
T TIGR00897 216 TILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTV---- 290 (402)
T ss_pred HHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHH----
Confidence 456788999988888888888999999999999876 899999999988899999999999999999999987542
Q ss_pred hhHHHHHHHHHHHHHHHHHHH---h-hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHh
Q psy11734 677 VRKVFATLGAVLPGVGALAAS---Y-VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM 752 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 752 (817)
...+.....++.+.+. . ..++.+.......+.+.+.+...+ ......+..|++||++.|+.|...++++.
T Consensus 291 -----~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~ 364 (402)
T TIGR00897 291 -----RWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAF 364 (402)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHH
Confidence 1122222222211111 1 112333333334444444443333 34455677888999999999999999999
Q ss_pred HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
++|.+.|.+.|..| +...+++.+++.+++.+...+.|
T Consensus 365 ~gp~i~g~l~~~~g---~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 365 LAPAIAVLFIGFFG---AIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHhhcc---hHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999875 77888888888888877776653
No 24
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.91 E-value=1.4e-22 Score=228.86 Aligned_cols=406 Identities=15% Similarity=0.155 Sum_probs=255.9
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
+++.++...+...+.+.....+..+.| ++++ +|+|+.+.++......++..+++++.|+++||+|||+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~--------- 93 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMP-YLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVF--------- 93 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhH-HHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCcee---------
Confidence 344455555555555555555566666 4555 49999999999999999999999999999999999886
Q ss_pred HHHHHhHHHHHHHHhhhccC---CChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhccccccc
Q psy11734 281 FATLGAVLPGVGALAASYVG---CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPL 356 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~ 356 (817)
+..+..+..++.......+ ++.....+...+.+.+.+...+.......+.. +++|++++++.+....+|+.+++.
T Consensus 94 -~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~ 172 (438)
T TIGR00712 94 -LPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPL 172 (438)
T ss_pred -hHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHH
Confidence 5666666666555544332 22333333344444455555554545555655 579999999999999999999988
Q ss_pred ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
+.+...+.. .+|+..|++.+++.++..+...++.|+
T Consensus 173 l~~~~~~~~--------------------------------------------~~w~~~f~~~~~~~~i~~~~~~~~~~~ 208 (438)
T TIGR00712 173 LVLLGMAWF--------------------------------------------NDWHAALYFPAICAIIVALFAFAMMRD 208 (438)
T ss_pred HHHHHHHHh--------------------------------------------hhhHHHHHHHHHHHHHHHHHHHHhccC
Confidence 876544321 169999999888877766554444444
Q ss_pred ccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc
Q psy11734 437 EVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF 516 (817)
Q Consensus 437 ~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (817)
+++..+.+ +. .+ +++|.. ++ .+++ ++-
T Consensus 209 ~~~~~~~~--~~-----------------------------~~-----~~~~~~----------~~-~~~~------~~~ 235 (438)
T TIGR00712 209 TPQSCGLP--PI-----------------------------EE-----YRNDYP----------DD-YNEK------AEQ 235 (438)
T ss_pred CHHhcCCC--Cc-----------------------------hh-----cccccc----------cc-cccc------ccc
Confidence 33211100 00 00 000000 00 0000 000
Q ss_pred cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh
Q psy11734 517 DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW 596 (817)
Q Consensus 517 ~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~ 596 (817)
+.+. | + .-.
T Consensus 236 ~~~~------------------------------~--------------------~---------------------~~~ 244 (438)
T TIGR00712 236 ELTA------------------------------K--------------------E---------------------IFM 244 (438)
T ss_pred ccch------------------------------H--------------------H---------------------HHH
Confidence 0000 0 0 001
Q ss_pred HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734 597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~ 676 (817)
+.++|+|.+|...+..++.....+++..|.|.|+++..|+|+.+++.......+.++++++++|+++||+++++..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~---- 320 (438)
T TIGR00712 245 QYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG---- 320 (438)
T ss_pred HHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCccc----
Confidence 2467889999988888888888899999999999998899999999999999999999999999999999755321
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH-hH
Q psy11734 677 VRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG-MV 753 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~-~i 753 (817)
...........++.+.+...+ .+.+......+..++..............|..| +.||+++|+.+...++++ .+
T Consensus 321 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~ 397 (438)
T TIGR00712 321 ---ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVA 397 (438)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhh
Confidence 111111111112222222211 122322222222222211111111234557777 789999999999988875 68
Q ss_pred HHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCcc
Q psy11734 754 APLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEV 796 (817)
Q Consensus 754 ~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 796 (817)
+|.+.|.+.|+.| |...+.++++..+++.+..+++.+++|
T Consensus 398 gp~l~G~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 398 ASAIVGYTVDFFG---WDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred cchhHHHHHHhcc---chHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999875 788888888888888777777655443
No 25
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.91 E-value=1e-24 Score=248.14 Aligned_cols=319 Identities=15% Similarity=0.093 Sum_probs=219.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---CcchhHHHHhhhHHHHHh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA---SWANVFYIFGAIAVLWFA 77 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~---gWr~~f~i~~~~~~i~~~ 77 (817)
+|+++|+++|...|...++++||+|++|||+++|++..+.++|.++++++..++.+ .. +||..|.+.+.+++++.+
T Consensus 128 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~-~~~~~~~~~~f~~~g~~~~~~~i 206 (467)
T PRK09556 128 LWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGAN-YFFDGHVIGMFIFPSIIALIIGF 206 (467)
T ss_pred HHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHH-hhccCcchhHHHHHHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999887766 32 699999999988888888
Q ss_pred hhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734 78 FWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG 157 (817)
Q Consensus 78 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (817)
+.+++.+++|+++++.++++.. .+.... +..++++.+.+
T Consensus 207 ~~~~~~~~~p~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~-------------------------------------- 245 (467)
T PRK09556 207 IGLRYGSDSPEELGWGKAEEIF--GEPISE-EDKETESTDMT-------------------------------------- 245 (467)
T ss_pred HHHHhCCCChhhcCCCChhhcc--cCccch-hhhccccccCc--------------------------------------
Confidence 8888888888765544332210 000000 00000000000
Q ss_pred HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCC
Q psy11734 158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGL 236 (817)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~ 236 (817)
..+. .++++|||.+|...+..++.....++...|.|.|+++.+|+
T Consensus 246 ----------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~ 291 (467)
T PRK09556 246 ----------------------------------KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAFQELGF 291 (467)
T ss_pred ----------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 0011 22478999999999999999999999999999999998999
Q ss_pred cccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh-ccCCChhHHHHHHHHHH-
Q psy11734 237 SVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS-YVGCNTSMVAIFFTIGM- 314 (817)
Q Consensus 237 s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~- 314 (817)
|..++++......++..++.+++|+++||+++|+. ......+..++...+. ...++.....+.+.+.+
T Consensus 292 s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 292 SKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRA----------LVACIALALIIFTLGVYQHATSEYMYLASLFALGF 361 (467)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCch----------HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999998874 2222222222221111 12223323322222222
Q ss_pred HHhhhccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734 315 AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS 392 (817)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (817)
+..+... .......|..| +++|++.|+.|..+++ |++++|.+.|.+.|.... +
T Consensus 362 ~~~~~~~-~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~-----------g------------- 416 (467)
T PRK09556 362 LVFGPQL-LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKN-----------G------------- 416 (467)
T ss_pred HHhhHHH-HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccc-----------c-------------
Confidence 2221111 11233446555 7899999999999997 779999999999983210 0
Q ss_pred cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec-ccccc
Q psy11734 393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG-SGEVQ 439 (817)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~-~~~~~ 439 (817)
....+ ....+|+..|++.+++.+++.+.++++. +++++
T Consensus 417 ----~~~~~-----~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 455 (467)
T PRK09556 417 ----TPIFG-----YTLTGWAGTFAALDIAAIGCICLMAIVAVMEERK 455 (467)
T ss_pred ----ccccc-----ccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000 0023699999999999998887777664 44433
No 26
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.91 E-value=3.4e-23 Score=228.67 Aligned_cols=285 Identities=13% Similarity=0.069 Sum_probs=225.4
Q ss_pred HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734 450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA 529 (817)
Q Consensus 450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~ 529 (817)
|++..+.++.......+++.+++..|++.+ |+|+|+++.|++.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~g~~~s~ 46 (377)
T TIGR00890 2 WWYVLVGTVIMCFTSGYVYTWTLLAPPLGR-----------------------------------YFGVGVTAVAIWFTL 46 (377)
T ss_pred eEEEeHHHHHHHHHhhHHhhhhhHHHHHHH-----------------------------------HhCCCHHHHHHHHHH
Confidence 334445555555566668888888988888 999999999999999
Q ss_pred HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------------
Q psy11734 530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------------ 591 (817)
Q Consensus 530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------------ 591 (817)
+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+
T Consensus 47 ~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 124 (377)
T TIGR00890 47 LLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIAD--SLAALYLTYGLASAGVGIAYGIALNTAVKWFPDKR 124 (377)
T ss_pred HHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHH--HHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcCccc
Confidence 9999999999999999999999999999999999999999999 99999999999999987
Q ss_pred -----------------------------------------------------c--C--------------chhHHhhcC
Q psy11734 592 -----------------------------------------------------L--E--------------TPWAAILSS 602 (817)
Q Consensus 592 -----------------------------------------------------~--~--------------~~~~~~l~~ 602 (817)
+ + .+.++.+|+
T Consensus 125 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (377)
T TIGR00890 125 GLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQLIKTNIEVSVKDYTVWEMLRT 204 (377)
T ss_pred HHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhccccCcccchhhhhHHHHHcC
Confidence 0 0 012456778
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHH
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFA 682 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~ 682 (817)
|+++......++..........+.+.|.++ +|.+..+.+...+...+...++++..|+++||++||+.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~---------- 273 (377)
T TIGR00890 205 PQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTM---------- 273 (377)
T ss_pred ccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh----------
Confidence 888888777777777777777778888765 789988899999999999999999999999999988654
Q ss_pred HHHHHHHHHHHHHHHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734 683 TLGAVLPGVGALAASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF 760 (817)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~ 760 (817)
..+..+..++.+++...+... ........+.+...+...+.......|..| ++|+++.|+.+...++|+.++|.+.|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~ 353 (377)
T TIGR00890 274 SIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASH 353 (377)
T ss_pred hHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 355555555555554443211 222222333444444444555566777777 789999999999999999999999999
Q ss_pred hhcCCccccHHHHHHHHHHHHHHHH
Q psy11734 761 LTQNKTLLEWRVVFWIMFLTLFISN 785 (817)
Q Consensus 761 ~~~~~g~~~~~~~~~~~~~~~~i~~ 785 (817)
+.|+.| |+..|.+.+++.+++.
T Consensus 354 l~~~~g---~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 354 ALTEIG---FEYTFIVTGAFALTSL 375 (377)
T ss_pred HHhhhc---hhhHHHHHHHHHHHhc
Confidence 999875 8888888887777654
No 27
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.91 E-value=3.8e-22 Score=221.59 Aligned_cols=388 Identities=20% Similarity=0.214 Sum_probs=265.0
Q ss_pred HHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734 217 YGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAA 296 (817)
Q Consensus 217 ~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (817)
...+......|. +++.+|.|..+.+++.....++..++.++.|+++||+|||+. ...+..+..++....
T Consensus 8 ~~~~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~~~~~~~~~~~~~~~ 76 (399)
T TIGR00893 8 LDRANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKT----------LAVFIVIWGVFTGLQ 76 (399)
T ss_pred HHHHhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCccee----------eHHHHHHHHHHHHHH
Confidence 333444455555 555689999999999999999999999999999999999987 566666666666666
Q ss_pred hccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCC
Q psy11734 297 SYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSP 375 (817)
Q Consensus 297 ~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~ 375 (817)
.+.+ +.+...+...+.+.+.+...+.......|..| |+|++++++.+....+|..++|.+.+.+.+..
T Consensus 77 ~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~---------- 145 (399)
T TIGR00893 77 AFAG-AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHF---------- 145 (399)
T ss_pred HHHc-CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhC----------
Confidence 5554 55555555566666666667777777888776 78999999999999999999999988776653
Q ss_pred CCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHH
Q psy11734 376 NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIM 455 (817)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~ 455 (817)
+|++.|++.+++.++..+...++.++++++......+.+.
T Consensus 146 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 185 (399)
T TIGR00893 146 -----------------------------------SWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWLTEEEKY----- 185 (399)
T ss_pred -----------------------------------CchHHHHHHHHHHHHHHHHhhheecCCCCccccCCHHHHh-----
Confidence 5999999988887766665555444432211100000000
Q ss_pred HHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHH
Q psy11734 456 GCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYI 535 (817)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~ 535 (817)
. ..+ .. . .+.
T Consensus 186 ------------~--------~~~--------~~-------~----------------~~~------------------- 195 (399)
T TIGR00893 186 ------------I--------VVG--------GL-------L----------------AEQ------------------- 195 (399)
T ss_pred ------------h--------cch--------hh-------c----------------ccc-------------------
Confidence 0 000 00 0 000
Q ss_pred HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHH
Q psy11734 536 LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGH 615 (817)
Q Consensus 536 i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~ 615 (817)
.++-.++ + .+.+.++.+++|+++...+..++.
T Consensus 196 ---------~~~~~~~--------------------~-------------------~~~~~~~~~~~~~~~~~~~~~~~~ 227 (399)
T TIGR00893 196 ---------QGKGPST--------------------P-------------------KKYQIKELLKDRRVWGLALGQFLV 227 (399)
T ss_pred ---------ccccccC--------------------C-------------------CccchHHHhcCHHHHHHHHHHHHH
Confidence 0000000 0 112356778899999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734 616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695 (817)
Q Consensus 616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 695 (817)
......+..+.|.|+++.+|.|..+.+...+...+.++++.++.|+++||++||+... .........+.....+....
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 305 (399)
T TIGR00893 228 NIGLGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSL--VFARKTAIIAGLVLSLLMFA 305 (399)
T ss_pred HhHHHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccch--hHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999985210 00000111111111111111
Q ss_pred HHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHH
Q psy11734 696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774 (817)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~ 774 (817)
... .++.+.......+..+..+ ..+.......|..| ++|+++.|+.+...++++.++|.+.|.+.|..+ +|+..+
T Consensus 306 ~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g--~~~~~~ 381 (399)
T TIGR00893 306 TNY-VNIPYAALALVALGFFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTG--SFAGAL 381 (399)
T ss_pred hcc-chhHHHHHHHHHHHHhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCC--chhHHH
Confidence 111 1122333333333333333 56667778888887 789999999999999999999999999999874 278888
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11734 775 WIMFLTLFISNVFFVL 790 (817)
Q Consensus 775 ~~~~~~~~i~~~~~~~ 790 (817)
.+.+++.+++.+..+.
T Consensus 382 ~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 382 MVVAALALIGALSYLL 397 (399)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888887777666543
No 28
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.91 E-value=1.3e-22 Score=227.94 Aligned_cols=391 Identities=12% Similarity=0.074 Sum_probs=258.2
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734 198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV 277 (817)
Q Consensus 198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~ 277 (817)
+.+|||.+|...+..++...+......++|.|+++.+|+|+.+.|+......++..+++++.|+++||+|+|+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~------ 78 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKH------ 78 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH------
Confidence 56789999999999999988888889999999999899999999999999999999999999999999999985
Q ss_pred HHHHHHHHhHHHHHHHHhhhc-cCCCh-h-HHHHHHHHHHHHhhhcccccccccccc---CCCchhHHHHHHHhhhhhcc
Q psy11734 278 RKVFATLGAVLPGVGALAASY-VGCNT-S-MVAIFFTIGMAFMGFCYASIRVNPIDL---SPNFSGTIMALSNGLGCVSG 351 (817)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~~~~~~~l~~~~~g~~~~~~~~~~~~~---~p~~~g~a~g~~~~~~~lg~ 351 (817)
+..+..+.++....+.. ...+. . .......++....+...........+. .+++++..+|..+....+|.
T Consensus 79 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 154 (420)
T PRK09528 79 ----LLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVSRRSGFEYGRARMWGSLGW 154 (420)
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHHhhccccchhhHHhhhHHH
Confidence 33333332222211111 00000 0 011112222222222222221112222 23466778899999999999
Q ss_pred cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734 352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV 431 (817)
Q Consensus 352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~ 431 (817)
+++|.+.|.+.+. +|+..|++.+++.++..++.+
T Consensus 155 ~i~~~~~g~l~~~----------------------------------------------~~~~~f~~~~~~~~~~~~~~~ 188 (420)
T PRK09528 155 ALCAFIAGILFNI----------------------------------------------NPQINFWLGSGSALILLVLLF 188 (420)
T ss_pred HHHHHHHHHHHhc----------------------------------------------CchHhHHHHHHHHHHHHHHHh
Confidence 9999998877653 478889888887777776666
Q ss_pred eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734 432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (817)
+..++++++++++..+ + +
T Consensus 189 ~~~~~~~~~~~~~~~~-------------------------------~---------------------------~---- 206 (420)
T PRK09528 189 FAKPDAPSTAKVANAL-------------------------------G---------------------------A---- 206 (420)
T ss_pred cccccccchhhhccch-------------------------------h---------------------------c----
Confidence 5544432211100000 0 0
Q ss_pred ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
++...+
T Consensus 207 --~~~~~~------------------------------------------------------------------------ 212 (420)
T PRK09528 207 --NASAVS------------------------------------------------------------------------ 212 (420)
T ss_pred --cccccc------------------------------------------------------------------------
Confidence 000000
Q ss_pred cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734 592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI---GLSVAENGVLSALPFLIMWLVSMSSSALADYLIV 668 (817)
Q Consensus 592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~ 668 (817)
.++.++.+|+|++|...+...+....+.....+.|.|+.+.. +.+..+.+...+...+...++.+..|+++||+++
T Consensus 213 -~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~ 291 (420)
T PRK09528 213 -LKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGA 291 (420)
T ss_pred -HHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 012345667777766666555555555556667888887653 5666778888888999999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH-HHHH
Q psy11734 669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL-SNGL 746 (817)
Q Consensus 669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~ 746 (817)
|+.+ ..+..+..+...++.+.+ +++..+....+.+...+...+.......+..| +.+++..+. .+..
T Consensus 292 ~~~~----------~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 360 (420)
T PRK09528 292 KNAL----------LLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFA 360 (420)
T ss_pred chhh----------HHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHH
Confidence 8754 355555555555555543 55555544444444444444444455566556 778887665 5777
Q ss_pred HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
..+|+.++|.+.|.+.|..| |+..|...+++.++..+..+...+++
T Consensus 361 ~~lg~~ig~~~~G~l~~~~G---~~~~f~~~~~~~~i~~~~~~~~~~~~ 406 (420)
T PRK09528 361 KQLGAVFLSTLAGNLYDSIG---FQGTYLILGGIVLLFTLISVFTLSGD 406 (420)
T ss_pred HHHHHHHHHHHHHHHHHhhC---chHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 88999999999999999875 88999988888877766665554433
No 29
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.91 E-value=1e-22 Score=227.43 Aligned_cols=286 Identities=14% Similarity=0.168 Sum_probs=218.8
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
.++..+++|..+.+++++++...+|+..+++..|.+.+ |+|+|+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----------------------------------~~~~s~~ 47 (405)
T TIGR00891 3 YRHLTRAQWNAFSAAWLGWLLDAFDFFLVALVLAEVAG-----------------------------------EFGLTTV 47 (405)
T ss_pred CCcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCChh
Confidence 34456788999999999999999999999999999988 9999999
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------- 591 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------- 591 (817)
+.+++.+.+.+++.+++++.|.++||+|||+++..+.++.+++++++++++ +++.+++.|+++|++.+
T Consensus 48 ~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i 125 (405)
T TIGR00891 48 DAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAP--GYITMFIARLVIGIGMGGEYGSSAAYV 125 (405)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHhhhhhhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 99999999999999987
Q ss_pred ---------------------------------------------------------------cCc-hh-----------
Q psy11734 592 ---------------------------------------------------------------LET-PW----------- 596 (817)
Q Consensus 592 ---------------------------------------------------------------~~~-~~----------- 596 (817)
++. +.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (405)
T TIGR00891 126 IESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRKNIPEAEDWKEKHAGKALVR 205 (405)
T ss_pred HHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHhhhhhhhh
Confidence 000 00
Q ss_pred ---HHhhcCH-------------------h----HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734 597 ---AAILSSL-------------------P----VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL 650 (817)
Q Consensus 597 ---~~~l~~~-------------------~----~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 650 (817)
++..+++ + +........+..........++|.|+++.+|++..+.+.+.+...+
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~ 285 (405)
T TIGR00891 206 TMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNI 285 (405)
T ss_pred hHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 0001100 0 1222333344445555667889999999899999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734 651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPID 730 (817)
Q Consensus 651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (817)
++++++++.|+++||++||+.+ ..+..+..+..........+.+.......+.+++.....+.......|
T Consensus 286 ~~~~g~~~~g~l~dr~g~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (405)
T TIGR00891 286 GAIVGGCVFGFLGDWLGRRKAY----------VCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGE 355 (405)
T ss_pred HHHHHHHHHHHHHHHhCchhhh----------HHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhh
Confidence 9999999999999999988753 233333322222222222233333333233334434444555666778
Q ss_pred cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHH
Q psy11734 731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWI 776 (817)
Q Consensus 731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~ 776 (817)
..| ++|++++|+.+...++++.++|.+.|.+.|+.|. |+..+..
T Consensus 356 ~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~--~~~~~~~ 400 (405)
T TIGR00891 356 YFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDE--YGTALAS 400 (405)
T ss_pred hCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccc--cchhHHh
Confidence 777 7899999999999999999999999999998753 6555544
No 30
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.91 E-value=9.7e-23 Score=230.71 Aligned_cols=296 Identities=14% Similarity=0.141 Sum_probs=232.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
..+++|.++..+++....++.+++.++...|.+.+ ++|++.++.+
T Consensus 13 ~~~~~w~i~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------------------------------~~g~s~~~~~ 57 (455)
T TIGR00892 13 DGGWGWVVLGATFVSIGFSYAFPKAVTVFFKELQQ-----------------------------------IFQATYSETA 57 (455)
T ss_pred CCCcchHHHHHHHHHHHHHHhhhcchhhhHHHHHH-----------------------------------HhCcchhHHH
Confidence 34678999999999999888899889998888888 9999999999
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHH-HHHHHhhhcc------------
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTV-LRFLEGVGED------------ 591 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~-~R~l~Gig~~------------ 591 (817)
++.+.+.+++.++.++.|+++||+|||++++.+.++.+++++++++++ +++.+++ .|+++|++.+
T Consensus 58 ~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~ 135 (455)
T TIGR00892 58 WISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSS--NVIELYLTAGFITGLGLAFNFQPSLTMLGK 135 (455)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHhcchhhhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9998865 5799999887
Q ss_pred -----------------------------------------------------------c--Cc----------------
Q psy11734 592 -----------------------------------------------------------L--ET---------------- 594 (817)
Q Consensus 592 -----------------------------------------------------------~--~~---------------- 594 (817)
. ..
T Consensus 136 ~~~~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (455)
T TIGR00892 136 YFYRRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSKEGLPPDG 215 (455)
T ss_pred HHHhhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCcccccccccccccCCCCC
Confidence 0 00
Q ss_pred ---h---------h-----HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHH
Q psy11734 595 ---P---------W-----AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSM 657 (817)
Q Consensus 595 ---~---------~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~ 657 (817)
+ . .+++++|.++......++....++....++|.|+++ .|++..+++...+..+++.+++++
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~ 294 (455)
T TIGR00892 216 STKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARP 294 (455)
T ss_pred ccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 134667778877777777788888888999999987 699999999999999999999999
Q ss_pred HHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cch
Q psy11734 658 SSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFS 736 (817)
Q Consensus 658 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 736 (817)
+.|+++||...++ .|+.....+....+++.++....+ +.+......++.+++.+...+...+...|..| +++
T Consensus 295 ~~g~l~d~~~~~~------~~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~ 367 (455)
T TIGR00892 295 SCGLIAGLKWIRP------HVQYLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRF 367 (455)
T ss_pred HHHHHhcccccCH------HHHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHH
Confidence 9999999843211 022222233333333333333333 45555555555566656666666677777766 789
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734 737 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF 787 (817)
Q Consensus 737 g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 787 (817)
+++.|+.+...++|++++|.+.|.+.|..+ +|+..|++.+++.+++.+.
T Consensus 368 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g--~~~~~f~~~~~~~li~~~~ 416 (455)
T TIGR00892 368 SSAVGLVTIVECCAVLIGPPLAGRLVDATK--NYKYIFYASGSIVVSAGLF 416 (455)
T ss_pred hhHHhHHHHHHHHHHHccccceeeeehhcC--CcchHHHHhhHHHHHHHHH
Confidence 999999999999999999999999999874 3778888877776666543
No 31
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.91 E-value=5.3e-22 Score=227.18 Aligned_cols=294 Identities=13% Similarity=0.132 Sum_probs=208.9
Q ss_pred HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh----HHH
Q psy11734 450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT----QGV 525 (817)
Q Consensus 450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~----~g~ 525 (817)
+.++..++++++++.+|...++...|.+.+ +++.+.++ .+.
T Consensus 15 ~~~~~~~~~g~~~~~~d~~~~~~~~~~i~~-----------------------------------~~~~~~~~~~~~~~~ 59 (490)
T PRK10642 15 RKAITAASLGNAMEWFDFGVYGFVAYALGK-----------------------------------VFFPGADPSVQMIAA 59 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------hhCCCCCcHHHHHHH
Confidence 567788899999999999999999998888 76543322 222
Q ss_pred --HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHH--------HHHHHHHHhhhcc----
Q psy11734 526 --ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVS--------MTVLRFLEGVGED---- 591 (817)
Q Consensus 526 --~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~--------l~~~R~l~Gig~~---- 591 (817)
+.++..+++.+++++.|+++||+|||+++.+++++++++++++++++ |+++ ++++|+++|+|.|
T Consensus 60 ~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~--~~~~~g~~a~~~l~~~R~l~G~g~g~~~~ 137 (490)
T PRK10642 60 LATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIP--SYATIGIWAPILLLLCKMAQGFSVGGEYT 137 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcc--cHHHHHHHHHHHHHHHHHHHHhHhHhhHH
Confidence 25788899999999999999999999999999999999999999999 8864 8999999999998
Q ss_pred ---------------------------------------------------------------------------cCc--
Q psy11734 592 ---------------------------------------------------------------------------LET-- 594 (817)
Q Consensus 592 ---------------------------------------------------------------------------~~~-- 594 (817)
++.
T Consensus 138 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~~~~~~~~~~esp~ 217 (490)
T PRK10642 138 GASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGIIGLYLRHALEETPA 217 (490)
T ss_pred HHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHHHHHHHHcCCCChh
Confidence 000
Q ss_pred ----------------------hhHHhhc-CHhHHH-HHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734 595 ----------------------PWAAILS-SLPVWS-LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL 650 (817)
Q Consensus 595 ----------------------~~~~~l~-~~~~~~-~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 650 (817)
+++++++ +++.+. .....++....++++..|+|+|+++.+|++..+.+.......+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 297 (490)
T PRK10642 218 FQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI 297 (490)
T ss_pred HHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 1112222 122222 2223345567888899999999998889998888888788889
Q ss_pred HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH-HHHHHHHh-hcCchHHHHHHHHHHHHHHhhhhhhhhhhc
Q psy11734 651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG-VGALAASY-VGCNTSMVAICFTIGMAFMGFCYASIRVNP 728 (817)
Q Consensus 651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (817)
+..++.++.|+++||+|||+.+ ..+.+... .+...+.. ...+.........+.+++.+...+......
T Consensus 298 ~~~~~~~~~g~l~dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 367 (490)
T PRK10642 298 GMLFVQPVMGLLSDRFGRRPFV----------ILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTL 367 (490)
T ss_pred HHHHHHHHHHHHHHHhccHHHH----------HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998643 23332222 12221221 122233333333333443344444455566
Q ss_pred cccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 729 IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 729 ~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
.+.+| +.|+++.|..+.....++.++|.+.+++.+..+ +|+..++...+..+++.+..++.+
T Consensus 368 ~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~--~~~~~~~~~~~~~~i~~~~~~~~p 430 (490)
T PRK10642 368 PAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQ--NLMMPAYYLMVVAVIGLITGVTMK 430 (490)
T ss_pred HHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhC--CchHHHHHHHHHHHHHHHHHHHhc
Confidence 67788 789999998777778888999999999988653 255555555556666655555553
No 32
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.91 E-value=1.6e-23 Score=234.22 Aligned_cols=288 Identities=16% Similarity=0.178 Sum_probs=201.3
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-----cccCcchhHHHHhhhHHHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-----FTASWANVFYIFGAIAVLW 75 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-----~~~gWr~~f~i~~~~~~i~ 75 (817)
.|+++|++.|...|...+++.||+|+|||++++++++.+..+|..+++++++++.+ ...|||++|++.++++++.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 102 LRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999998864 1369999999999888888
Q ss_pred HhhhhheeccCCCCCCCCCHHHHhHhhhhccccccc-cccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734 76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERR-KDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL 154 (817)
Q Consensus 76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (817)
.++.++++||+|+++++.++++++...+..+..+.. ++++ +..+
T Consensus 182 ~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~---------------------------------- 226 (412)
T TIGR02332 182 GVMTWFWLDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPE-GAFA---------------------------------- 226 (412)
T ss_pred HHHHhhccCCCcccCCCCCHHHHHHHHHHHHhccccccccc-cccc----------------------------------
Confidence 777888889988876666554443222211110000 0000 0000
Q ss_pred hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH-h
Q psy11734 155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE-V 233 (817)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~-~ 233 (817)
....+.+..+++++ +|.+|...+.+++.....+++.+|+|.|+++ .
T Consensus 227 --------------------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 273 (412)
T TIGR02332 227 --------------------------------HAAMPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFN 273 (412)
T ss_pred --------------------------------cccccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 00000112344444 6889999999999999999999999999988 3
Q ss_pred hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHH
Q psy11734 234 IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIG 313 (817)
Q Consensus 234 ~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (817)
.|++..+++.+..+..+++.++.+++|+++||+++|+. ..........+++....... +.......+...
T Consensus 274 ~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 343 (412)
T TIGR02332 274 QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKH---------HTALPYLFAAAGWLLASATD-HNLIQLLGIIMA 343 (412)
T ss_pred CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHH---------HHHHHHHHHHHHHHHHHhcC-CHHHHHHHHHHH
Confidence 47788899999999999999999999999999987763 12223333333332222222 222222222222
Q ss_pred HHHhhhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 314 MAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 314 ~~~~g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
..+.....+.......+. ++|+|++++|+.|..+++|++++|.+.|.+.|..|
T Consensus 344 ~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g 397 (412)
T TIGR02332 344 SMGSFSAMAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATG 397 (412)
T ss_pred HHHhhhhhhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCC
Confidence 222212222233444554 45899999999999999999999999999998865
No 33
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.91 E-value=2.2e-22 Score=226.73 Aligned_cols=279 Identities=15% Similarity=0.123 Sum_probs=214.3
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734 440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD 519 (817)
Q Consensus 440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 519 (817)
+|.+...++++..+..+.++++...+|+...+...|.+.+ |+|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-----------------------------------~~~~s 51 (426)
T PRK12307 7 PWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKA-----------------------------------DLGLT 51 (426)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-----------------------------------HhCCC
Confidence 4555556788888899999999999999999999988888 99999
Q ss_pred hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------
Q psy11734 520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------- 591 (817)
Q Consensus 520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------- 591 (817)
+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++ +++.++++|+++|++.+
T Consensus 52 ~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~g~~~~~~~~ 129 (426)
T PRK12307 52 DMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLAS--GVIMLTLSRFIVGMGMAGEYACAST 129 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh--HHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999987
Q ss_pred ---------------------------------------------------------------cCc--------------
Q psy11734 592 ---------------------------------------------------------------LET-------------- 594 (817)
Q Consensus 592 ---------------------------------------------------------------~~~-------------- 594 (817)
++.
T Consensus 130 ~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 209 (426)
T PRK12307 130 YAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGKGKH 209 (426)
T ss_pred HHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHHHHHHCCCChHHHHhhhhccccc
Confidence 000
Q ss_pred ----------hhHHhhcCHhHHHHHHH---HHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHH
Q psy11734 595 ----------PWAAILSSLPVWSLIIS---EVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSA 661 (817)
Q Consensus 595 ----------~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~ 661 (817)
++++++++|.++..... .++.....+.+..++|.|+++ .|.++.+.+...+...+++++++++.|+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~g~~~~g~ 288 (426)
T PRK12307 210 SQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAAFGTVLGNIVWGL 288 (426)
T ss_pred cccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22345566665443332 223333445577889999988 5999999999989999999999999999
Q ss_pred HHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHH-HHHhhhhhhhhhhccccCC-CchHHH
Q psy11734 662 LADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTI 739 (817)
Q Consensus 662 l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~g~~ 739 (817)
+.||++||+.+ ..+.++..+..+.+.....+.........+.. +......+.......|..| +.||++
T Consensus 289 l~dr~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~ 358 (426)
T PRK12307 289 CADRIGLKKTF----------SIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLG 358 (426)
T ss_pred HHHHhccHHHH----------HHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhh
Confidence 99999987643 24444444443333332222222222212211 1111223344456678888 779999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734 740 MALSNGLGCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 740 ~g~~~~~~~~g~~i~p~~~g~~~~~~g 766 (817)
+|+.+....+++.++|.+.|++.|..+
T Consensus 359 ~g~~~~~~~~~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 359 TGLIYNLAATSGTFNSMAATWLGITMG 385 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHHHccc
Confidence 999999999999999999999999876
No 34
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.90 E-value=7.8e-22 Score=218.14 Aligned_cols=367 Identities=14% Similarity=0.118 Sum_probs=246.6
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHH
Q psy11734 210 ISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLP 289 (817)
Q Consensus 210 i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~ 289 (817)
+.+++...+.......+|.|+++.+|.|..+.|++.....+...+.+++.|+++||+|||+. +...+....
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~---------~~~~~~~~~ 74 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKG---------LILFCCLLA 74 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchH---------HHHHHHHHH
Confidence 45666777777788889999988899999999999999999999999999999999999875 133444444
Q ss_pred HHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHH--HHHHHhhhhhcccccccccceeccccc
Q psy11734 290 GVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTI--MALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a--~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.++.....+.+ +.+.....-.+.+.+.+...+.......+..| +.|+.+ .+..+....+|..++|.+.+.+.+..
T Consensus 75 ~~~~~~~~~~~-~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~- 152 (375)
T TIGR00899 75 ALACLLFAWNR-NYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGF- 152 (375)
T ss_pred HHHHHHHHhcc-hHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhc-
Confidence 44444444433 43333322222222333334444444555444 455543 67777888899999999988876653
Q ss_pred ccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCC
Q psy11734 367 SINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESIL 446 (817)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (817)
+|+..|++.+++.++..++..++.++.+++.+++
T Consensus 153 --------------------------------------------~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 186 (375)
T TIGR00899 153 --------------------------------------------GFTVMFLTAALAFVLCGVLVWLFLPSYPRGAPGA-- 186 (375)
T ss_pred --------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCcccCcccc--
Confidence 6999999998887776665544333322110000
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
+ ++.
T Consensus 187 --------------------------------~----------------------------------~~~---------- 190 (375)
T TIGR00899 187 --------------------------------L----------------------------------TRL---------- 190 (375)
T ss_pred --------------------------------c----------------------------------Ccc----------
Confidence 0 000
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHH
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVW 606 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~ 606 (817)
+.++.+++|+++
T Consensus 191 --------------------------------------------------------------------~~~~~~~~~~~~ 202 (375)
T TIGR00899 191 --------------------------------------------------------------------EVRGLLASRDTR 202 (375)
T ss_pred --------------------------------------------------------------------hhhhhhcCcchH
Confidence 001122334444
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734 607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA 686 (817)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 686 (817)
......++..........+.|.|+++++|.++.+.+...........++.+..|++.||+++|+.+ ..+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~ 272 (375)
T TIGR00899 203 LLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLM----------LLAA 272 (375)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHH----------HHHH
Confidence 444444444444455567789999888999999999888887788888999999999999988653 2333
Q ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734 687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g 766 (817)
....+....+...+ +.+.......+.+++.+...+......+|..|++++++.|+.+...++|..++|.+.|.+.|..+
T Consensus 273 ~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g 351 (375)
T TIGR00899 273 LAGVAFYTGLAADN-SLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERWS 351 (375)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 33333333333332 34444444445555555556666677788889888899999999999999999999999999865
Q ss_pred cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 767 LLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 767 ~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
|+..|+..+++.+++.+...+.
T Consensus 352 ---~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 352 ---YHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred ---chhHHHHHHHHHHHHHHHHhee
Confidence 7888888888888877766544
No 35
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.90 E-value=6.9e-22 Score=216.59 Aligned_cols=359 Identities=12% Similarity=-0.002 Sum_probs=244.7
Q ss_pred HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734 215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL 294 (817)
Q Consensus 215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (817)
+...+..+...+|.+.+| +|.|..+.|++.+...++..++++..|+++||+|||+. ..........+..
T Consensus 3 ~~~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~----------~~~~~~~~~~~~~ 71 (368)
T TIGR00903 3 SQAIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWF----------LFGSLATFAAAAG 71 (368)
T ss_pred hhHHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHH----------HHHHHHHHHHHHH
Confidence 455667777778877766 79999999999999999999999999999999997764 3333333333322
Q ss_pred hhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCC
Q psy11734 295 AASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLS 374 (817)
Q Consensus 295 ~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~ 374 (817)
.. ...++.......-.+.+.+.+...+......+..++|+|++++++.+....+|..+++.+.+.+.++.
T Consensus 72 ~~-~~~~~~~~l~~~R~l~G~g~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~--------- 141 (368)
T TIGR00903 72 RL-LDPFNYEWLLACQLLAALGQPFLLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAG--------- 141 (368)
T ss_pred HH-HHhccHHHHHHHHHHHHhHhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---------
Confidence 22 22235555555555555555443333333344466689999999999999999999998888776543
Q ss_pred CCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHH
Q psy11734 375 PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGI 454 (817)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~ 454 (817)
+||..|++.+++.++..++..++-|+.++. . + +
T Consensus 142 ------------------------------------gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~-~-~--~------- 174 (368)
T TIGR00903 142 ------------------------------------GLQLLIIPIAAVAAAGIILVLAALPALPFQ-A-A--E------- 174 (368)
T ss_pred ------------------------------------chHHHHHHHHHHHHHHHHHHHHHcCCCCCC-C-C--C-------
Confidence 699999998887776655544433332210 0 0 0
Q ss_pred HHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHH
Q psy11734 455 MGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGY 534 (817)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~ 534 (817)
+. +.
T Consensus 175 ------------------------------------------------------------~~--~~-------------- 178 (368)
T TIGR00903 175 ------------------------------------------------------------GF--GF-------------- 178 (368)
T ss_pred ------------------------------------------------------------Cc--ch--------------
Confidence 00 00
Q ss_pred HHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHH
Q psy11734 535 ILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVG 614 (817)
Q Consensus 535 ~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~ 614 (817)
++ . . +++++++|+|.+|.+.+..++
T Consensus 179 ----------------~~-----------------~-~---------------------~~~~~ll~~~~~~~~~~~~~~ 203 (368)
T TIGR00903 179 ----------------KD-----------------A-V---------------------KEFGALAGRKDLWIIGAILGF 203 (368)
T ss_pred ----------------HH-----------------H-H---------------------HHHHHHHcChhHHHHHHHHHH
Confidence 00 0 0 124567889999999999999
Q ss_pred HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHH
Q psy11734 615 HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGAL 694 (817)
Q Consensus 615 ~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~ 694 (817)
....++++.+|+|+|+++ .|++.. .+....+..+.+.++ .++++||..||+. |+........+.++.+.
T Consensus 204 ~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~ 272 (368)
T TIGR00903 204 GVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFL 272 (368)
T ss_pred HHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHH
Confidence 999999999999999977 688865 666666666655555 5889999877532 23323323333344444
Q ss_pred HHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHH
Q psy11734 695 AASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVV 773 (817)
Q Consensus 695 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~ 773 (817)
.+.... +....+....+.+++....++..+...+|.+| +.||++.|+.+..+++++..+|.+.+.+.. + .+..
T Consensus 273 ~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~~--~---~~~~ 346 (368)
T TIGR00903 273 ALAFEL-NRLALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFIS--S---AEAY 346 (368)
T ss_pred HHHHcc-ccHHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHhc--C---HHHH
Confidence 444333 34444444455555555566667788899999 689999999999999999999999998874 2 5677
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11734 774 FWIMFLTLFISNVFFV 789 (817)
Q Consensus 774 ~~~~~~~~~i~~~~~~ 789 (817)
|...+...+++.+...
T Consensus 347 f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 347 FTFLAILITIAFAIAL 362 (368)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777777777776654
No 36
>PRK09952 shikimate transporter; Provisional
Probab=99.90 E-value=7.3e-22 Score=222.67 Aligned_cols=298 Identities=16% Similarity=0.123 Sum_probs=216.9
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEee-ecccccccccCCCCCCCCCCCCCCceeeecccccccccc--cCChh
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEM-VRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF--DWDER 521 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~ 521 (817)
..++++.+....+++++++++|+..++...|.. .+ ++ +.++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~ 60 (438)
T PRK09952 16 SLSRARRAALGSFAGAVVDWYDFLLYGITAALVFNR-----------------------------------EFFPQVSPA 60 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------hcCCCCCcH
Confidence 456677888899999999999999999877653 33 33 45554
Q ss_pred hHHHHH-----HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhh
Q psy11734 522 TQGVIL-----SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGV 588 (817)
Q Consensus 522 ~~g~~~-----s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gi 588 (817)
.+++. ++..++..+++++.|+++||+|||+++..++++++++++++++++ +++ .++++|+++|+
T Consensus 61 -~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~R~l~G~ 137 (438)
T PRK09952 61 -MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLP--SFSTIGWWAPVLLVTLRAIQGF 137 (438)
T ss_pred -HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHHh
Confidence 35443 345566779999999999999999999999999999999999999 876 58999999999
Q ss_pred hcc-----------------------------------------------------------------------------
Q psy11734 589 GED----------------------------------------------------------------------------- 591 (817)
Q Consensus 589 g~~----------------------------------------------------------------------------- 591 (817)
+.|
T Consensus 138 ~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~~~l~~ 217 (438)
T PRK09952 138 AVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIALWVRN 217 (438)
T ss_pred hhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHHHHHHH
Confidence 998
Q ss_pred --cCc-----------------hh-HHhhcCHhHHHHHH-HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734 592 --LET-----------------PW-AAILSSLPVWSLII-SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL 650 (817)
Q Consensus 592 --~~~-----------------~~-~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 650 (817)
++. +. +.++++|+.|.... ..++.....+....|.|.|+++.+|++...........++
T Consensus 218 ~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~ 297 (438)
T PRK09952 218 GMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGG 297 (438)
T ss_pred hCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 000 01 11345555555543 4556667888889999999999899998776666666778
Q ss_pred HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHh--hcCc-hHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734 651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASY--VGCN-TSMVAICFTIGMAFMGFCYASIRVN 727 (817)
Q Consensus 651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (817)
.+.++.++.|+++||+|||+.+ ..+.++..++.+.+.. ...+ .+.......+.+++.+...+..+..
T Consensus 298 ~~~i~~~~~g~l~Dr~grr~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 367 (438)
T PRK09952 298 LSCLTIPCFAWLADRFGRRRVY----------ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPM 367 (438)
T ss_pred HHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999988653 2333333332222211 1212 2232333344445555556667788
Q ss_pred ccccCC-CchHHHHHHHHHHHH-HHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 728 PIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 728 ~~~~~~-~~~g~~~g~~~~~~~-~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
..|.+| +.|+++.|+.+..+. +++.++|.+.+++.|..+ ++|...+...+++.+++.+..+..
T Consensus 368 ~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 368 FTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-GSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHHHHHHHHc
Confidence 889888 789999999776655 799999999999998653 347788888888888877776655
No 37
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.90 E-value=5.7e-22 Score=231.36 Aligned_cols=296 Identities=14% Similarity=0.146 Sum_probs=234.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
..+++|.++++++++++...+|...++..+|.+.+ +++++..+.+
T Consensus 161 ~~~~~~~l~~i~~l~~~~~g~d~~~is~ilp~i~~-----------------------------------~~gls~~~~g 205 (742)
T TIGR01299 161 HGRFQWALFFVLGLALMADGVEVFVVGFVLPSAEK-----------------------------------DLCIPDSGKG 205 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHH
Confidence 35788999999999999999999999999998888 9999999999
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------- 591 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------- 591 (817)
++.+++.++++++++++|+++||+|||+++++++++++++++++++++ +++.++++|+++|++.+
T Consensus 206 ~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~--s~~~llv~R~l~G~g~g~~~p~~~~~isE~ 283 (742)
T TIGR01299 206 MLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQ--GYGFFLFCRLLSGFGIGGAIPIVFSYFAEF 283 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 99999999999999988
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 284 ~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ll~~~~lPESPrwL~~ 363 (742)
T TIGR01299 284 LAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAIGALTFMPESPRFFLE 363 (742)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH
Confidence
Q ss_pred -----------------c-C---ch----------------------------------------------hHHhhc---
Q psy11734 592 -----------------L-E---TP----------------------------------------------WAAILS--- 601 (817)
Q Consensus 592 -----------------~-~---~~----------------------------------------------~~~~l~--- 601 (817)
. + .+ ++++++
T Consensus 364 ~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~ 443 (742)
T TIGR01299 364 NGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEV 443 (742)
T ss_pred CCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccH
Confidence 0 0 00 000111
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH----h-----------------CCCh----------------------
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQV----I-----------------GLSV---------------------- 638 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~----~-----------------g~s~---------------------- 638 (817)
.++.+.+++.+++..+++|++..|+|.++++. + +++.
T Consensus 444 ~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 523 (742)
T TIGR01299 444 REITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKS 523 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccc
Confidence 12346777888999999999999999886541 0 0000
Q ss_pred -----------------------------------------------------------------------hHHHHHHHH
Q psy11734 639 -----------------------------------------------------------------------AENGVLSAL 647 (817)
Q Consensus 639 -----------------------------------------------------------------------~~~~~~~~~ 647 (817)
........+
T Consensus 524 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l 603 (742)
T TIGR01299 524 VSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFL 603 (742)
T ss_pred cccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHH
Confidence 012233556
Q ss_pred HHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhh
Q psy11734 648 PFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVN 727 (817)
Q Consensus 648 ~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 727 (817)
..++.++|.++.|+++||+|||+++ ..++++.+++++++.+.. +....+++.++.+++.+...+....+
T Consensus 604 ~~l~~i~G~il~g~L~Dr~GRr~~l----------~~~~~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~ 672 (742)
T TIGR01299 604 GTLAVLPGNIVSALLMDKIGRLRML----------AGSMVLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVL 672 (742)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6789999999999999999988654 477777777777766654 34444444445555555566777788
Q ss_pred ccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 728 PIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 728 ~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
+.|.+| +.|++++|+.+..+.+|++++|.+.+.+.+.. ...+|++.+++.++++++.++++
T Consensus 673 ~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~~----~~~pf~i~a~~lll~~ll~~~LP 734 (742)
T TIGR01299 673 TVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGIT----KAAPILFASAALACGGLLALKLP 734 (742)
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----hHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 78999999999999999999999999887753 45678788888777777766653
No 38
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.90 E-value=1.1e-21 Score=219.38 Aligned_cols=274 Identities=15% Similarity=0.075 Sum_probs=220.6
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
+++++.+...+.+..+...++...+.+..|.+.+ |+|+|+.+.++
T Consensus 8 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~s~~~~~~ 52 (406)
T PRK15402 8 GRQALLFPLCLVLFEFATYIANDMIQPGMLAVVE-----------------------------------DFNAGAEWVPT 52 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHhcchHHHHH-----------------------------------HhCCCHHHHHH
Confidence 4567777888888888999999999998888888 99999999999
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------- 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------- 591 (817)
..+.+.+++.+++++.|+++||+|||+++..+..+.+++.+++++++ +++.+++.|+++|++.+
T Consensus 53 ~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~ 130 (406)
T PRK15402 53 SMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQ--SIEQFTLLRFLQGIGLCFIGAVGYAAIQESF 130 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhHhhhHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 99999999999999877
Q ss_pred ----------------------------------------------------------c--------C-------chhHH
Q psy11734 592 ----------------------------------------------------------L--------E-------TPWAA 598 (817)
Q Consensus 592 ----------------------------------------------------------~--------~-------~~~~~ 598 (817)
+ + +++++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (406)
T PRK15402 131 EEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVGEKLSLKELGRDYKL 210 (406)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCccccccccHHHHHHHHHH
Confidence 0 0 01245
Q ss_pred hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
++++|+++...+..++.....+....+.|.|+++.+|.++.+.+.......++.+++.++.|+++||+++|+.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~------ 284 (406)
T PRK15402 211 VLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLI------ 284 (406)
T ss_pred HHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH------
Confidence 67888888888877777777777778899999988999999999888878888999999999999999987643
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHH
Q psy11734 679 KVFATLGAVLPGVGALAASYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA 754 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~ 754 (817)
..+..+..++.+++... ..+.++......+.+.+.+...+..........++++|++.+..+..+.++..++
T Consensus 285 ----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 360 (406)
T PRK15402 285 ----RMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVG 360 (406)
T ss_pred ----HHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHH
Confidence 34444444444444332 1123334444444555555545555444444556889999999999999999999
Q ss_pred HHHHHHhhcCCc
Q psy11734 755 PLTVGFLTQNKT 766 (817)
Q Consensus 755 p~~~g~~~~~~g 766 (817)
+.+.+.+.+..+
T Consensus 361 ~~~~~~l~~~~~ 372 (406)
T PRK15402 361 IELSKHAYLGGG 372 (406)
T ss_pred HHHHHhcccCCc
Confidence 999999988875
No 39
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.90 E-value=1.2e-23 Score=240.83 Aligned_cols=310 Identities=11% Similarity=0.016 Sum_probs=215.0
Q ss_pred CcccccCCcccccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|++||+|.+...|....++.+++ |+|||++++|++.....+|..+||.+++++.+ +.||||+|+++.++.++..++.
T Consensus 100 ~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~-~~gwr~~f~i~~~~~~~~~~l~ 178 (495)
T PRK14995 100 TRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLE-HFYWGSVFLINVPIVLVVMGLT 178 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCChHHHHHHHHHHHHHHHHHH
Confidence 489999999999999998888877 67999999999999999999999999999999 9999999999999988888888
Q ss_pred hheeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734 80 CILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF 158 (817)
Q Consensus 80 ~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (817)
++++|++|++++ ..+..+....... ...+-+.+.... .++.....+....+
T Consensus 179 ~~~l~~~~~~~~~~~d~~g~~~~~~~------------------------~~~l~~~~~~~~----~~~~~~~~~~~~~~ 230 (495)
T PRK14995 179 ARYVPRQAGRRDQPLNLGHALMLIVA------------------------ILLLVYSAKTAL----KGFLSLWVTSLTLL 230 (495)
T ss_pred HHhCCCCCCCCCCCCChHhHHHHHHH------------------------HHHHHHHHHhcc----ccCCchHHHHHHHH
Confidence 787776543221 1111110000000 000000000000 00111111222211
Q ss_pred HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734 159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV 238 (817)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 238 (817)
.....+..+ ..++...+.+.-..+++|||.+....+..++....+++...+.|.|+|+++|+|+
T Consensus 231 ~~~~~l~~f----------------~~~e~~~~~p~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~ 294 (495)
T PRK14995 231 TGALLLGLF----------------IRTQLAASRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSP 294 (495)
T ss_pred HHHHHHHHH----------------HHHHhcCCCCCcCHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 121111111 1111122222223689999999999999999999999999999999999999999
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--CChhHHHHHHHHHHHH
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAIFFTIGMAF 316 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 316 (817)
.++|+...+..++..+++++.|++.||+++|+. +..+..+..++...+.... ++.+.......+.+.+
T Consensus 295 ~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g 364 (495)
T PRK14995 295 LEAGMFMLPVMVASGFSGPIAGILVSRLGLRLV----------ATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFS 364 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHh
Confidence 999999999999999999999999999998774 5666666666555443322 2333344445555555
Q ss_pred hhhccccccc-cccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 317 MGFCYASIRV-NPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 317 ~g~~~~~~~~-~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+...+.... ...+.++++++.+.++.++.+++|+++|+.+.|.+.++.
T Consensus 365 ~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~~~ 414 (495)
T PRK14995 365 AASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLSRS 414 (495)
T ss_pred HHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555554444 444456689999999999999999999999999998763
No 40
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.90 E-value=1.2e-21 Score=217.17 Aligned_cols=290 Identities=15% Similarity=0.102 Sum_probs=216.2
Q ss_pred HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734 452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY 531 (817)
Q Consensus 452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~ 531 (817)
.+....+..+.....+....+.+|.+.+ |+|.|.++.|++.+.+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------------------------~~g~s~~~~g~~~s~~~ 48 (382)
T PRK10091 4 VILSLALGTFGLGMAEFGIMGVLTELAH-----------------------------------DVGISIPAAGHMISYYA 48 (382)
T ss_pred hHHHHHHHHHHHHhhHHHHHhChHHHHH-----------------------------------HcCCCHHHHhHHHHHHH
Confidence 3455566777777788888888888888 99999999999999999
Q ss_pred HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--------------------
Q psy11734 532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-------------------- 591 (817)
Q Consensus 532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-------------------- 591 (817)
+++.+++++.|++.||+|||+++.++.++.+++.+++++++ +++.+++.|+++|++.+
T Consensus 49 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 126 (382)
T PRK10091 49 LGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSS--SYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVT 126 (382)
T ss_pred HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhC--cHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhh
Confidence 99999999999999999999999999999999999999999 99999999999999877
Q ss_pred ----------------------------------------------------cC------ch---hHHhhcCHhHHHHHH
Q psy11734 592 ----------------------------------------------------LE------TP---WAAILSSLPVWSLII 610 (817)
Q Consensus 592 ----------------------------------------------------~~------~~---~~~~l~~~~~~~~~~ 610 (817)
++ .+ ..+.+|+++.|....
T Consensus 127 ~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (382)
T PRK10091 127 AAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDEAKGGLREQFHFLRSPAPWLIFA 206 (382)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcccccCHHHHHHHhcChHHHHHHH
Confidence 00 00 124566777777666
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH
Q psy11734 611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG 690 (817)
Q Consensus 611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~ 690 (817)
..++.....+....+.+.|+++..|+++.+.+.+.....++.++++++.|++.||+++|+.+ ..+..+.+
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~~----------~~~~~~~~ 276 (382)
T PRK10091 207 ATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPLRIA----------AVTDFIIV 276 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCchhHH----------HHHHHHHH
Confidence 66665566666677888899888899999999999999999999999999999999987653 34555555
Q ss_pred HHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhh-hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccc
Q psy11734 691 VGALAASYVGCNTSMVAICFTIGMAFMGFCYASIR-VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLL 768 (817)
Q Consensus 691 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~ 768 (817)
++.+++....++.+.......+.+.+.....++.. ....+..+ +.++.+ ..+...++|+.++|.+.|.+.|..+
T Consensus 277 i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~-- 352 (382)
T PRK10091 277 LALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGL-- 352 (382)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHccc--
Confidence 55544433322333333333333332222222222 23333333 445544 3467788999999999999999753
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 769 EWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 769 ~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
+|+..+...+++..+.........
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 353 AYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHh
Confidence 388888888777776665555553
No 41
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.90 E-value=1.2e-21 Score=217.22 Aligned_cols=283 Identities=17% Similarity=0.099 Sum_probs=218.3
Q ss_pred HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHH
Q psy11734 453 GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYY 532 (817)
Q Consensus 453 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~ 532 (817)
+...+++.++...+...+.+..|.+.+ |+|.|+.+.|++.+.+.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~lp~~~~-----------------------------------~~~~s~~~~G~~~s~~~l 52 (381)
T PRK03633 8 VLLLLCGLLLLTLAIAVLNTLVPLWLA-----------------------------------QEHLPTWQVGVVSSSYFT 52 (381)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHH-----------------------------------HcCCCHHHHHHHHHHHHH
Confidence 556667777888888999999999888 999999999999999999
Q ss_pred HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------------
Q psy11734 533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------------- 591 (817)
Q Consensus 533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------------- 591 (817)
++.+++++.|+++||+|||+++..+.++.+++.+++++++ |++.+++.|+++|++.+
T Consensus 53 ~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (381)
T PRK03633 53 GNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMV--GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGR 130 (381)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999999987
Q ss_pred ---------------------------------------------------c-------CchhHHhhcCHhHHHHHHHHH
Q psy11734 592 ---------------------------------------------------L-------ETPWAAILSSLPVWSLIISEV 613 (817)
Q Consensus 592 ---------------------------------------------------~-------~~~~~~~l~~~~~~~~~~~~~ 613 (817)
+ ..+.++.+|+|.++......+
T Consensus 131 ~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (381)
T PRK03633 131 LLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWVTGLVLAAILPLLFTRILNQQAENHDSTSIWPMLKLRQARLGVNGCI 210 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCHHHHHHhcchHHHHHHHH
Confidence 0 112345667777666554444
Q ss_pred HHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHH
Q psy11734 614 GHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGA 693 (817)
Q Consensus 614 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~ 693 (817)
.....+....+++|.|+++ .|.+..+++.+.+...++.+++++..|++.||+++|+.+ ..+.....++.
T Consensus 211 ~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l----------~~~~~~~~~~~ 279 (381)
T PRK03633 211 ISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVL----------RVQVFVVILGS 279 (381)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHH----------HHHHHHHHHHH
Confidence 4444556667789999987 699999999999999999999999999999999987643 23444444433
Q ss_pred HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHH
Q psy11734 694 LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRV 772 (817)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~ 772 (817)
+.+. . .. .......+.+.......+.......|..| ++++...+..+...++|+.++|.+.|++.|+.+ ++.
T Consensus 280 ~~~~--~-~~-~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g---~~~ 352 (381)
T PRK03633 280 IAML--S-QA-AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYS---DNL 352 (381)
T ss_pred HHHh--h-hH-HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC---ccH
Confidence 3332 1 11 11122222333333445666666667666 567888888888889999999999999999875 678
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy11734 773 VFWIMFLTLFISNVFFVL 790 (817)
Q Consensus 773 ~~~~~~~~~~i~~~~~~~ 790 (817)
.|.+.+.+.++.....++
T Consensus 353 ~f~~~~~~~l~~~~~~~~ 370 (381)
T PRK03633 353 LFIMIASVSFIYLLMLLR 370 (381)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888877777766544443
No 42
>PRK15075 citrate-proton symporter; Provisional
Probab=99.89 E-value=2.3e-21 Score=218.71 Aligned_cols=275 Identities=17% Similarity=0.121 Sum_probs=197.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
.++.|++....+++++++.++|+..++++.|.+.+ |++.++.+.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~i~~-----------------------------------~~~~~~~~~~ 53 (434)
T PRK15075 9 SRESKARAILRVTSGNFLEMFDFFLFGFYATAIAK-----------------------------------TFFPAGNEFA 53 (434)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCCCchH
Confidence 34566778999999999999999999999999999 9999887765
Q ss_pred HHH-HHH--HHHH---HHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhc
Q psy11734 525 VIL-SAF--YYGY---ILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGE 590 (817)
Q Consensus 525 ~~~-s~~--~~~~---~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~ 590 (817)
.+. +.. ..++ .+++++.|+++||+|||+++..++++++++++++++++ +++ .++++|+++|++.
T Consensus 54 ~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~l~~~R~l~G~~~ 131 (434)
T PRK15075 54 SLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVP--GYATIGLAAPLLVLLGRLLQGFSA 131 (434)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHhhccc
Confidence 443 322 2222 47899999999999999999999999999999999999 876 4789999999998
Q ss_pred c-------------------------------------------------------------------------------
Q psy11734 591 D------------------------------------------------------------------------------- 591 (817)
Q Consensus 591 ~------------------------------------------------------------------------------- 591 (817)
+
T Consensus 132 g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~~ 211 (434)
T PRK15075 132 GVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIVPFIFLIRRSL 211 (434)
T ss_pred cccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHHHHHhc
Confidence 7
Q ss_pred cCc-h-------------hHHhhcCHhHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734 592 LET-P-------------WAAILSSLPVWSL-IISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS 656 (817)
Q Consensus 592 ~~~-~-------------~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 656 (817)
++. + +++..++++.+.. ....++....++....|.|.|+++++|++..+.+....+..+++++++
T Consensus 212 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 291 (434)
T PRK15075 212 EETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVGVSNFIWL 291 (434)
T ss_pred CCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 000 0 0111223333333 233344556677888999999999899999999988888999999999
Q ss_pred HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH-HHHHHH-h-hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734 657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV-GALAAS-Y-VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP 733 (817)
Q Consensus 657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (817)
+++|+++||++||+.. ..+..+..+ ....+. . ...+.........+.+++.+...+..+....|..|
T Consensus 292 ~~~g~l~Dr~g~r~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~~p 361 (434)
T PRK15075 292 PIGGALSDRIGRRPVL----------IAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEVMP 361 (434)
T ss_pred HHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHHCC
Confidence 9999999999987642 122222211 111111 1 11122222222233334444444555566778887
Q ss_pred -CchHHHHHHHHHHHHH-HHhHHHHHHHHhhcCCc
Q psy11734 734 -NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 734 -~~~g~~~g~~~~~~~~-g~~i~p~~~g~~~~~~g 766 (817)
+.|+++.|+.+..+.. ++.++|.+.|.+.|+.|
T Consensus 362 ~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 362 AEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred CCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 7899999997666664 68899999999999876
No 43
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.89 E-value=1.7e-22 Score=224.46 Aligned_cols=283 Identities=23% Similarity=0.399 Sum_probs=205.6
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|||++++++......+|..+++.+++.+.+ ..+||+.|++.+.+.++..++.+
T Consensus 88 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 88 LRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILI-HFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHH-hCCchHHHHHHHHHHHHHHHHhh
Confidence 37899999999999999999999999999999999999999999999999999998 89999999999988888877777
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||+|+++++.++++++...++... +. +++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---------------------------------------------- 198 (399)
T TIGR00893 167 KFIPDPPQKAKWLTEEEKYIVVGGLLA-EQ-QGK---------------------------------------------- 198 (399)
T ss_pred heecCCCCccccCCHHHHhhcchhhcc-cc-ccc----------------------------------------------
Confidence 777777655444333322211111000 00 000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
..++..+...++++|+|+++...+..++.....+....+.|.|+++.+|.+..+
T Consensus 199 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (399)
T TIGR00893 199 --------------------------GPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE 252 (399)
T ss_pred --------------------------cccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence 001112345678899999999999999999999999999999999989999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH--HHHHhhhcc-CCChhHHHHHHHHHHHHh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG--VGALAASYV-GCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~~~~~~l~~~~~ 317 (817)
++.+.....+++.+++++.|+++||+++|+.. ............ ......... .++.........++.+..
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKS------LVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL 326 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccc------hhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch
Confidence 99999999999999999999999999998620 000111111111 111111111 112333333333333333
Q ss_pred hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 318 GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 318 g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
+ ..+.......|..| ++|+++.|+.+...++|+.++|.+.|.+.|..
T Consensus 327 ~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~ 374 (399)
T TIGR00893 327 G-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATT 374 (399)
T ss_pred h-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCC
Confidence 3 44555666666555 79999999999999999999999999998875
No 44
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.89 E-value=7.3e-23 Score=230.73 Aligned_cols=309 Identities=18% Similarity=0.162 Sum_probs=209.0
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.|..++...+++.|++|+|||++++++++.+..+|..+++.+.+++.+ ..|||+.|++.+++.++..++.++
T Consensus 118 ~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~-~~gw~~~f~~~~i~~~~~~~~~~~ 196 (434)
T PRK11663 118 WVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIAL-HYGWRYGMMIAGIIAIVVGLFLCW 196 (434)
T ss_pred HHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHHHH
Confidence 7788999999999999999999999999999999999999999999999999999 899999999998877776666666
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
.+||+|++.+..+.++.++ +..+..+..++++.++
T Consensus 197 ~~~~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~------------------------------------------- 231 (434)
T PRK11663 197 RLRDKPQAMGLPSVGEWRH--DALELAQQQEGAGLSR------------------------------------------- 231 (434)
T ss_pred HcCCCHhhcCCCCcccccc--cccccchhccccCCCh-------------------------------------------
Confidence 6677654322111100000 0000000000000000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchH-HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPW-AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+..+ ...+|+|.++...+..++.....+++..|+|.|+++.+|+|..+
T Consensus 232 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 232 -------------------------------KEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred -------------------------------hhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 0111 23678899999888888888888888899999998878999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
++.......+++.++++++|+++||+.+++.. ........+.....+.+..+ ...+...........+++....
T Consensus 281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~----~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~ 354 (434)
T PRK11663 281 ANSAVSMFELGGFIGALVAGWGSDKLFNGNRG----PMNLIFAAGILLSVGSLWLM--PFASYVMQAACFFTIGFFVFGP 354 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhccCCcc----HHHHHHHHHHHHHHHHHHHc--ccccHHHHHHHHHHHHHHHhhH
Confidence 99999999999999999999999998433210 00111122222222222222 1112222222222111111111
Q ss_pred cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
.........|..| +++|+++|+.++..++|++++|.+.|.+.|..
T Consensus 355 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~---------------------------------- 400 (434)
T PRK11663 355 QMLIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIW---------------------------------- 400 (434)
T ss_pred HHHHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhc----------------------------------
Confidence 1112334456554 79999999999999999999999999998865
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
+|+..|++.+++.+++.+..+...|+++
T Consensus 401 -----------g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 428 (434)
T PRK11663 401 -----------HWTGFFVVISIAAGISALLLLPFLNAQA 428 (434)
T ss_pred -----------ccHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 5889999998888877766655444433
No 45
>PRK03545 putative arabinose transporter; Provisional
Probab=99.89 E-value=6.9e-23 Score=227.86 Aligned_cols=281 Identities=15% Similarity=0.069 Sum_probs=216.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+..+|...+++.|++|+|||++++|++..+.++|..++|++++.+.+ ..|||++|++.+++.++..+..+
T Consensus 103 ~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~l~~~~~~ 181 (390)
T PRK03545 103 SRIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQ-YLGWRTTFLAIGGGALITLLLLI 181 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHH-HhcHHHHHHHHHHHHHHHHHHHH
Confidence 38899999998999999999999999999999999999999999999999999999 89999999999988877766666
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..|++|++++ + +
T Consensus 182 ~~~~~~~~~~~---~-~--------------------------------------------------------------- 194 (390)
T PRK03545 182 KLLPLLPSEHS---G-S--------------------------------------------------------------- 194 (390)
T ss_pred HhCCCCCCCCc---c-h---------------------------------------------------------------
Confidence 65554332110 0 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
..+.++++|||.++......++.....+....+.|.++++.+|+|..+
T Consensus 195 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 242 (390)
T PRK03545 195 --------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF 242 (390)
T ss_pred --------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 012456789999887777777777777777788999998888999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
++.+..+..+++++++++.|+++||.++|+ ...+..+...+...+....++.........+.+.+....
T Consensus 243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~-----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~ 311 (390)
T PRK03545 243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSGF-----------LLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI 311 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchhH-----------HHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence 999999999999999999999999998764 333333333333333222334333333333333333333
Q ss_pred cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccc
Q psy11734 321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTV 400 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (817)
.+.......+..|+++++++|+.+...++|.++||.+.|.+.|+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~----------------------------------- 356 (390)
T PRK03545 312 GLAMQVKVLKLAPDATDVAMALFSGIFNIGIGAGALLGNQVSLHL----------------------------------- 356 (390)
T ss_pred hHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----------------------------------
Confidence 344456666778889999999999999999999999999999886
Q ss_pred cccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 401 GFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 401 ~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
+++..|++.+++.+++++......|++
T Consensus 357 ----------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (390)
T PRK03545 357 ----------GLSSIGYVGAALALAALVWSILIFRRF 383 (390)
T ss_pred ----------ChhHHHHHHHHHHHHHHHHHHHHcccc
Confidence 589999999999998888776666543
No 46
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.89 E-value=1.3e-20 Score=216.22 Aligned_cols=398 Identities=16% Similarity=0.128 Sum_probs=265.4
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734 206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG 285 (817)
Q Consensus 206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~ 285 (817)
..+.+..++............|.+.++ +|.|..+.++......++..++.++.|+++||+|||+. ...+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~ 73 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRL----------FLIS 73 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHH----------HHHH
Confidence 344455555556666666778877766 79999999999999999999999999999999999986 6677
Q ss_pred hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
..+..++.......+ +.........+.+.+.+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.++
T Consensus 74 ~~~~~~~~~~~~~~~-~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~ 152 (485)
T TIGR00711 74 TFAFTLGSLLCGVAP-NLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIEN 152 (485)
T ss_pred HHHHHHHHHHHhCcC-CHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccC
Confidence 777777666665554 55555555555566666666666677777665 8999999999999999999999999888765
Q ss_pred ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734 365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES 444 (817)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
. +|++.|++.+.+.++..++..++.++++++.
T Consensus 153 ~---------------------------------------------~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--- 184 (485)
T TIGR00711 153 Y---------------------------------------------HWRWIFLINVPIGIIVVVVAFFILPRDKPAA--- 184 (485)
T ss_pred c---------------------------------------------CceehhhhhhHHHHHHHHHHHHHcCCccccc---
Confidence 4 6999999888777766655544444322211
Q ss_pred CCchhHHHHHHH--HHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 445 ILPARYVLGIMG--CMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 445 ~~~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
..+.++.-.... .+.......++. + +.++.+.
T Consensus 185 ~~~~d~~g~~l~~~~~~~~~~~~~~~----------~-----------------------------------~~~~~~~- 218 (485)
T TIGR00711 185 SENFDFLGLLLLSVGLGSLLYGLSEG----------P-----------------------------------ERGWFDS- 218 (485)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHhhC----------C-----------------------------------CCCCCCc-
Confidence 112222211111 111111110000 0 1111111
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch--hHHhh
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP--WAAIL 600 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~--~~~~l 600 (817)
+... .....++..+...... .. -.+++ ..+.+
T Consensus 219 ----------------------------~~~~--~~~~~~~~~~~~~~~~--~~--------------~~~~~~~~~~~~ 252 (485)
T TIGR00711 219 ----------------------------NEIL--ILSITGLVAIIAFVVW--EL--------------TDDNPLVDLRLF 252 (485)
T ss_pred ----------------------------hHHH--HHHHHHHHHHHHHHHH--HH--------------cCCCCccCHHHH
Confidence 0000 0000000000000000 00 00111 23678
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~ 680 (817)
++|+++...+..++.....++...++|.|+++.+|+++.+++.......++..++.++.|++.||+++|+.+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~-------- 324 (485)
T TIGR00711 253 KYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLV-------- 324 (485)
T ss_pred cCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHH--------
Confidence 889998888888888899999999999999999999999999999999999999999999999999987543
Q ss_pred HHHHHHHHHHHHHHHHHh--hcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHH
Q psy11734 681 FATLGAVLPGVGALAASY--VGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPL 756 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~ 756 (817)
..+..+..++..++.+ .+. +.+.......+.+++.+...++......+..| ++++++.|+.+..+++|+.+++.
T Consensus 325 --~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~ 402 (485)
T TIGR00711 325 --TIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTA 402 (485)
T ss_pred --HHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 3566666666655552 121 23344444555566665555555544445455 88999999999999999999999
Q ss_pred HHHHhhcCC
Q psy11734 757 TVGFLTQNK 765 (817)
Q Consensus 757 ~~g~~~~~~ 765 (817)
+.+.+.++.
T Consensus 403 i~g~~~~~~ 411 (485)
T TIGR00711 403 LITTILTNR 411 (485)
T ss_pred HHHHHHHHH
Confidence 999998864
No 47
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.89 E-value=9.6e-21 Score=211.42 Aligned_cols=369 Identities=12% Similarity=0.066 Sum_probs=243.2
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
.++++....+..+....+.......+|.++++.+|.|..+.|+......++..+++++.|+++||+|||+.
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~--------- 83 (399)
T PRK05122 13 LTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKA--------- 83 (399)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcch---------
Confidence 35667778888888888888888899999988899999999999999999999999999999999999996
Q ss_pred HHHHHhHHHHHHHHhhhc---cCC----ChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccc
Q psy11734 281 FATLGAVLPGVGALAASY---VGC----NTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGM 352 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~---~~~----~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~ 352 (817)
+..+.++..++...... ..+ +.......-.+.+.+.+...+.......+ .++|+|+++.++.+....+|..
T Consensus 84 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~ 162 (399)
T PRK05122 84 -VVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALA 162 (399)
T ss_pred -HHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHH
Confidence 66665555443332222 211 11122333334444444445544554455 4458999999999998889999
Q ss_pred ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734 353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL 432 (817)
Q Consensus 353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 432 (817)
+++.+.+.+.+.. +|+..+++.+++.++.....
T Consensus 163 ~g~~l~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~-- 195 (399)
T PRK05122 163 IGAPLGVLLYHWG---------------------------------------------GLAGLGLLIMLLALLGLLLA-- 195 (399)
T ss_pred HHHHHHHHHHHcc---------------------------------------------cHHHHHHHHHHHHHHHHHHH--
Confidence 9999988776654 58888777665544333222
Q ss_pred ecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734 433 FGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL 512 (817)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (817)
++.++..+++ + +
T Consensus 196 --~~~~~~~~~~--~-------------------------------~--------------------------------- 207 (399)
T PRK05122 196 --RPRPAVPPVK--G-------------------------------E--------------------------------- 207 (399)
T ss_pred --hcCCCCCCCC--c-------------------------------c---------------------------------
Confidence 1111100000 0 0
Q ss_pred cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhccc
Q psy11734 513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDL 592 (817)
Q Consensus 513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~ 592 (817)
+. +. +
T Consensus 208 --~~--~~------------------------------~----------------------------------------- 212 (399)
T PRK05122 208 --RL--PF------------------------------R----------------------------------------- 212 (399)
T ss_pred --ch--hH------------------------------H-----------------------------------------
Confidence 00 00 0
Q ss_pred CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734 593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL 672 (817)
Q Consensus 593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 672 (817)
+.++ +.+.......+....+.....+.|.|+++ .|.+ +.+.......++.+++++..|++.||+++|+.+
T Consensus 213 -----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~ 282 (399)
T PRK05122 213 -----RVLG--RVWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLFGNLINRLGGLRVA 282 (399)
T ss_pred -----HHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 0000 00000011122233444556677888776 4653 456666778888999999999999999987543
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH
Q psy11734 673 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG 751 (817)
Q Consensus 673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 751 (817)
..+..+..++.+.+...+ +.+.......+.+++.+..++.......+..| ++||++.|+.+...++|.
T Consensus 283 ----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (399)
T PRK05122 283 ----------IVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSL 351 (399)
T ss_pred ----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555543 44444444555555555556555555556666 889999999999999999
Q ss_pred hHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 752 MVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 752 ~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
.++|.+.|.+.|..| |+..++..+++.+++.+.....++
T Consensus 352 ~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~ 390 (399)
T PRK05122 352 GITGPLAGLVASWFG---YPSIFLAAALAALLGLALTWLLYR 390 (399)
T ss_pred HHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999865 889999988888888777666543
No 48
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.89 E-value=1.1e-20 Score=210.03 Aligned_cols=287 Identities=9% Similarity=-0.025 Sum_probs=218.1
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
+..|..+..+..+.+....+.+.....+|++.+ |+|+++++.|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----------------------------------~~g~s~~~~g~~ 60 (394)
T PRK10213 16 RPNWSAVFSVAFCVACLIIVEFLPVSLLTPMAQ-----------------------------------DLGISEGVAGQS 60 (394)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH-----------------------------------HcCCCHHHHHHH
Confidence 336676666666666666666666666788888 999999999999
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------- 591 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------- 591 (817)
.+.+.+++.+++++.|.++||+|||+++..+.++.+++.+++++++ +++.+++.|+++|++.+
T Consensus 61 ~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~ 138 (394)
T PRK10213 61 VTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFAN--SFSLLLIGRACLGLALGGFWAMSASLTMRLVP 138 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHC--hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcC
Confidence 9999999999999999999999999999999999999999999999 99999999999999988
Q ss_pred ---------------------------------------------------------cC---------chhHHhhcCHhH
Q psy11734 592 ---------------------------------------------------------LE---------TPWAAILSSLPV 605 (817)
Q Consensus 592 ---------------------------------------------------------~~---------~~~~~~l~~~~~ 605 (817)
++ .+.++.+|+|++
T Consensus 139 ~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~~~~~~~~~~~~~l~~~~~ 218 (394)
T PRK10213 139 PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPGEPSHQKQNTFRLLQRPGV 218 (394)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCcccccchhHHHHHhcCHHH
Confidence 00 123467788999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG 685 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 685 (817)
|...+..++.....++...+.++++.+++|+++.+.+......++++.++.++.+++.||.+++.. ....
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l----------~~~~ 288 (394)
T PRK10213 219 MAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKLAL----------AGAP 288 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHH
Confidence 888777777777777777787555555679999999999999999999999999999999543321 1222
Q ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734 686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
.......+++.... ++.+.......+.+++.+...+...+..++..|++++.+.+......++|..+||.+.|.+.|..
T Consensus 289 ~~~~~~~~~l~~~~-~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 289 LVLAVSALVLTLWG-SDKIVATGVAIIWGLTFALVPVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred HHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22222223333333 24455555555566666666666666666667777788888888888999999999999999987
Q ss_pred ccccHHHHHHHHHHHHHHH
Q psy11734 766 TLLEWRVVFWIMFLTLFIS 784 (817)
Q Consensus 766 g~~~~~~~~~~~~~~~~i~ 784 (817)
| ++..+...++..++.
T Consensus 368 g---~~~~~~~~~~~~~~~ 383 (394)
T PRK10213 368 G---LTSPLMLSGTLMLLT 383 (394)
T ss_pred C---hhhHHHHHHHHHHHH
Confidence 5 556666665554443
No 49
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.89 E-value=2.8e-21 Score=212.49 Aligned_cols=354 Identities=15% Similarity=0.107 Sum_probs=255.6
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV 287 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~ 287 (817)
.....++...........+|.|..+ .+.+..+.+++.....++..+++++.|+++||+|||+. ...+..
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~----------~~~~~~ 72 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKV----------MIGADL 72 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHH----------HHHHHH
Confidence 4455566666666667778888877 69999999999999999999999999999999999986 555555
Q ss_pred HHHHHHHhhhccC----CChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 288 LPGVGALAASYVG----CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 288 ~~~~~~~~~~~~~----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
+..++........ .+.+.......+.+.+.+...+.......|..| ++|++++++.+....+|..++|.+.+.+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~ 152 (365)
T TIGR00900 73 IRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMY 152 (365)
T ss_pred HHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 4444433333222 144555555555566666667777777778766 79999999999999999999999998877
Q ss_pred ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734 363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN 442 (817)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 442 (817)
+.. +|+..|++.++..+++.++...+..+++++.+
T Consensus 153 ~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (365)
T TIGR00900 153 ATL---------------------------------------------GIKWAIWVDAVGFAISALLIVSVRIPELAASE 187 (365)
T ss_pred HHh---------------------------------------------hHHHHHHHHHHHHHHHHHHHHhcccccCCCcc
Confidence 654 69999998877766665544333222111000
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
++ +. ++..
T Consensus 188 ~~----------------------------------------------------------------------~~--~~~~ 195 (365)
T TIGR00900 188 IQ----------------------------------------------------------------------AL--SNAV 195 (365)
T ss_pred cc----------------------------------------------------------------------cc--chhH
Confidence 00 00 0000
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcC
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSS 602 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~ 602 (817)
..+ ..+++++++|+
T Consensus 196 -----------------------------------------------~~~-------------------~~~~~~~~~~~ 209 (365)
T TIGR00900 196 -----------------------------------------------LRD-------------------TREGIKFVLKN 209 (365)
T ss_pred -----------------------------------------------HHH-------------------HHhHHHHHHcC
Confidence 000 00124567788
Q ss_pred HhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 603 LPVWSLIISEVGHDYGFYLIS-SDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
|.++......++......... .+.|.|.++.+|.+..+.+.......++.+++.+..+++.||++||+.+
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--------- 280 (365)
T TIGR00900 210 PLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRMALM--------- 280 (365)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchhHHH---------
Confidence 888888888888877777776 8899999988899999999999999999999999999999999887543
Q ss_pred HHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734 682 ATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF 760 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~ 760 (817)
..+..+.+++++.+.+.+++.+......++.+++.+...+.......|..| ++|+++.|+.+...++++.++|.+.|.
T Consensus 281 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~ 359 (365)
T TIGR00900 281 -TGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGP 359 (365)
T ss_pred -HHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555555555555543224444555556666666667777777888777 789999999999999999999999999
Q ss_pred hhcCC
Q psy11734 761 LTQNK 765 (817)
Q Consensus 761 ~~~~~ 765 (817)
+.|+.
T Consensus 360 l~~~~ 364 (365)
T TIGR00900 360 LADHL 364 (365)
T ss_pred HHHHc
Confidence 98875
No 50
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.89 E-value=1.1e-22 Score=222.75 Aligned_cols=255 Identities=14% Similarity=0.023 Sum_probs=186.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|+|++. .+.....++|++|+|||++++++.+.+..+|..+++++++++.+ ..|||+.|++.+.++++..++++
T Consensus 85 ~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~-~~gWr~~f~~~~~l~~~~~~~~~ 162 (368)
T TIGR00903 85 CQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYT-AGGLQLLIIPIAAVAAAGIILVL 162 (368)
T ss_pred HHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccchHHHHHHHHHHHHHHHHHHH
Confidence 49999999995 66777778999999999999999999999999999999999999 89999999999998888888888
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+||+|+++++.. +.+ +
T Consensus 163 ~~lp~~p~~~~~~~--~~~-------~----------------------------------------------------- 180 (368)
T TIGR00903 163 AALPALPFQAAEGF--GFK-------D----------------------------------------------------- 180 (368)
T ss_pred HHcCCCCCCCCCCc--chH-------H-----------------------------------------------------
Confidence 88888764321100 000 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
...++++++|||.+|...+..++....++++.+|+|.|+++ +|++..
T Consensus 181 -------------------------------~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~- 227 (368)
T TIGR00903 181 -------------------------------AVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI- 227 (368)
T ss_pred -------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-
Confidence 01136789999999999999999999999999999999977 688865
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.+.......+.+.++ .++++||.+||+. |+...........+.+..+.... +.......+.+.+++....
T Consensus 228 ~~~~~~l~~~~g~~g---~~~~~d~~~r~~~------r~~~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~ 297 (368)
T TIGR00903 228 AGDAVALAILAGLIG---VAVIPDRVARAGL------RSIYIRAAALLIAAFFLALAFEL-NRLALFAFIGIAGLLMLPA 297 (368)
T ss_pred HHHHHHHHHHHHHHH---HHHhhHHhhhhhh------HHHHHHHHHHHHHHHHHHHHHcc-ccHHHHHHHHHHHHhhhhh
Confidence 555555555544444 5889999876542 22222222233333333333333 2333344444444545455
Q ss_pred cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
.+....+..|..| +.||++.|+.+..+++++..+|.+.+.+.
T Consensus 298 ~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~~~ 340 (368)
T TIGR00903 298 YAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAMLFI 340 (368)
T ss_pred HHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHHHh
Confidence 5556677788777 68999999999999999999998877554
No 51
>PRK10054 putative transporter; Provisional
Probab=99.88 E-value=2.2e-21 Score=215.72 Aligned_cols=369 Identities=15% Similarity=0.135 Sum_probs=253.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
+++++...+..++...+.+....++|.|+++.+|+|..+.|+..+...++..++++..|+++||+|+|+.
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~---------- 75 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRY---------- 75 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchh----------
Confidence 3457788888999999999999999999998899999999999999999999999999999999999986
Q ss_pred HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccce
Q psy11734 282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGF 360 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~ 360 (817)
+..+..+..++...+.+.+ +.+.......+.+...+...+.......|.. +++|+++.|+.+...++|.+++|.+.+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 76 MLLAITAFASGFIAIPLVN-NVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666666666666665554 3333333333333333333444555555654 5789999999999999999999999887
Q ss_pred ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
+.+ . +|+..|++.+++.+++.++..++.++++++
T Consensus 155 l~~-~---------------------------------------------g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~ 188 (395)
T PRK10054 155 LVM-Q---------------------------------------------SINLPFWLAAICSAFPLVFIQIWVQRSEKA 188 (395)
T ss_pred HHH-h---------------------------------------------ccCcHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 653 2 588899988877776654443322222111
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734 441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE 520 (817)
Q Consensus 441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 520 (817)
.+++ + + +
T Consensus 189 ~~~~----------------------------------------------------------------------~-~--~ 195 (395)
T PRK10054 189 IATE----------------------------------------------------------------------T-G--S 195 (395)
T ss_pred cccc----------------------------------------------------------------------h-h--h
Confidence 0000 0 0 0
Q ss_pred hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734 521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL 600 (817)
Q Consensus 521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l 600 (817)
. .+.++.+
T Consensus 196 ---------------------------------------------------~---------------------~~~~~~~ 203 (395)
T PRK10054 196 ---------------------------------------------------V---------------------WSPSVLL 203 (395)
T ss_pred ---------------------------------------------------h---------------------hhhhhhc
Confidence 0 0123567
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh--CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI--GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~--g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
|+|+++...+..++.......+..+.+.|+.+.. +.+....+.......+.....++..|++.||.++|+.+
T Consensus 204 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l------ 277 (395)
T PRK10054 204 QDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIRPLM------ 277 (395)
T ss_pred cCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCchhHH------
Confidence 7888888877777777777777778888876543 44555667777777777777788889999999877643
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
..++.+..+....+....++.+...+...+.+.+.....+.......+..| +.+++..+..+ ...+|..++|.+
T Consensus 278 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~ 352 (395)
T PRK10054 278 ----TAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLV 352 (395)
T ss_pred ----HHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHH
Confidence 355555555555554432234333444444455444445555566767777 67899988765 677899999999
Q ss_pred HHHhhcCCccccHHHHHHHHHHHHHHHHH
Q psy11734 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNV 786 (817)
Q Consensus 758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~ 786 (817)
+|.+.|+.| ++..|++.+....+..+
T Consensus 353 ~G~l~~~~g---~~~~~~~~~~~~~~~~~ 378 (395)
T PRK10054 353 SGVILTTLP---PWSLFVILALAIVAAWL 378 (395)
T ss_pred HHHHHHHcC---hhhHHHHHHHHHHHHHH
Confidence 999999986 55666665555444443
No 52
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.88 E-value=1.6e-20 Score=209.06 Aligned_cols=373 Identities=11% Similarity=0.070 Sum_probs=239.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
|.+.+...+..++...........+|.|+++.+|.|+.+.|+......+ +...+.+.+++ +||+|+||.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~--------- 83 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKS--------- 83 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhH---------
Confidence 6677788888888888888888999999998899999999998766555 45555555566 999999875
Q ss_pred HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-Cch--hHHHHHHHhhhhhcccccccc
Q psy11734 281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~--g~a~g~~~~~~~lg~~~~~~i 357 (817)
++..+.+...+......+.+ +.+.......+..+......+.......+..+ +.| +...+..+....+|.+++|.+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i 162 (393)
T PRK15011 84 LIVFCCLLGVLACTLFAWNR-NYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPL 162 (393)
T ss_pred HHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHH
Confidence 13344444334444443432 33322222122222222333334444455433 333 345578888899999999999
Q ss_pred cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
.+.+.++. +|+..|++.++..++..+...++.|+.
T Consensus 163 ~~~l~~~~---------------------------------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~ 197 (393)
T PRK15011 163 AYALAMGF---------------------------------------------SFTVMYLSAAVAFIVCGVMVWLFLPSM 197 (393)
T ss_pred HHHHHHhc---------------------------------------------ChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 99888765 699999998887776655544433332
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734 438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD 517 (817)
Q Consensus 438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (817)
+++.++. + + +.+
T Consensus 198 ~~~~~~~--~-------------------------------~-----------------------------------~~~ 209 (393)
T PRK15011 198 RKELPLA--T-------------------------------G-----------------------------------TLE 209 (393)
T ss_pred CCCCccc--c-------------------------------c-----------------------------------ccc
Confidence 2110000 0 0 000
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734 518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA 597 (817)
Q Consensus 518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~ 597 (817)
. .|..+|.
T Consensus 210 --~-------------------------~~~~~~~--------------------------------------------- 217 (393)
T PRK15011 210 --A-------------------------PRRNRRD--------------------------------------------- 217 (393)
T ss_pred --c-------------------------ccccccc---------------------------------------------
Confidence 0 0000010
Q ss_pred HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchh
Q psy11734 598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNV 677 (817)
Q Consensus 598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~ 677 (817)
.+.............+.+..+.|.|+++.+|+++.+.+.+.....+..+++.++.|+++||+++|+.+
T Consensus 218 -------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~----- 285 (393)
T PRK15011 218 -------TLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLM----- 285 (393)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH-----
Confidence 11111112222234444567899999998999999999888888888899999999999999987542
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 678 RKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 678 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
..+.....+.+......+ +.+.......+.++..+...+......+|..|+++++++++.+...++|+.++|.+
T Consensus 286 -----~~~~~~~~~~~~~~~~~~-~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l 359 (393)
T PRK15011 286 -----RVAAVAGVCFYAGMLMAH-SPAILLGLQLLNAIYIGILGGIGMLYFQDLMPGQAGSATTLYTNTSRVGWIIAGSL 359 (393)
T ss_pred -----HHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 233333333332232222 44444444444444444444445566678889889999999999999999999999
Q ss_pred HHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
.|.+.|..+ |+..+++.+++.+++.+..++.
T Consensus 360 ~G~i~~~~g---~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 360 AGIVAEIWN---YHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhh
Confidence 999999865 8889888888888877777665
No 53
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.88 E-value=2.2e-20 Score=214.85 Aligned_cols=419 Identities=13% Similarity=0.075 Sum_probs=240.2
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734 204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT 283 (817)
Q Consensus 204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~ 283 (817)
.+....+..++............|.+.+ .+|.|..+.++......++..++.++.|+++||+|||+. +.
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~ 89 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQG-EFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLA----------MV 89 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------HH
Confidence 4455566666666666666666776554 589999999999999999999999999999999999985 66
Q ss_pred HHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 284 LGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
.+..+..++.....+.+ +.+.......+.+.+.+...+.......+..| ++|+.+.++.+....+|..++|.+.+.+.
T Consensus 90 ~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~ 168 (496)
T PRK03893 90 ISIVLFSVGTLACGFAP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVV 168 (496)
T ss_pred HHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666666665544 44444444444455555555555556666555 78999999999999999999999988776
Q ss_pred ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734 363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN 442 (817)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 442 (817)
+.. +|+..|++.++..++........++.++.+.+
T Consensus 169 ~~~---------------------------------------------~w~~~f~~~~~~~~~~~~~~~~~p~~~~~~~~ 203 (496)
T PRK03893 169 PVW---------------------------------------------GWRALFFIGILPIIFALWLRKNLPEAEDWKEK 203 (496)
T ss_pred ccC---------------------------------------------CHHHHHHHHHHHHHHHHHHHHhCCCchhhhhh
Confidence 543 69999987554443332221111111000000
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc-ccCChh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK-FDWDER 521 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~ 521 (817)
++ .+.+. .+..+. +..+..
T Consensus 204 ~~-~~~~~-----------------------------------------------------------~~~~~~~~~~~~~ 223 (496)
T PRK03893 204 HA-GKAPV-----------------------------------------------------------RTMVDILYRGEHR 223 (496)
T ss_pred cc-ccccc-----------------------------------------------------------hhHHHHHhcchhH
Confidence 00 00000 000000 000001
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
..+.......... +.. ......+.........+.. ......+.. ..+..+
T Consensus 224 ~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------------~~~~~~ 273 (496)
T PRK03893 224 IINILLTLAAAAA-LWF-----CFAGNLQNAAIVAVLGLLC-AAIFISFMV-----------------------QSSGKR 273 (496)
T ss_pred HHHHHHHHHHHHH-HHH-----HHHhhhcchhHHHHHHHHH-HHHHHHHHH-----------------------Hhcccc
Confidence 1111111000000 000 0000001111111111111 111111111 000011
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
.+.........+......+....++|.|+++.+|++..+++.+.+...++.+++.++.|+++||+++|+.+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~--------- 344 (496)
T PRK03893 274 WPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAY--------- 344 (496)
T ss_pred hhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH---------
Confidence 22222223333333333345678899999888999999999999999999999999999999999987643
Q ss_pred HHHHHHHHHHHHHHHHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHH
Q psy11734 682 ATLGAVLPGVGALAASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG 759 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g 759 (817)
..+..+..+..+.+....... +.......+.++......+......++..| ++||+++|+.+....+|+.++|.+.|
T Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g 423 (496)
T PRK03893 345 -VCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGA 423 (496)
T ss_pred -HHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHH
Confidence 234444333333333222222 222222222222222233444566777777 78999999999999999999999999
Q ss_pred HhhcCCccccHHHHHHHHHHHHH
Q psy11734 760 FLTQNKTLLEWRVVFWIMFLTLF 782 (817)
Q Consensus 760 ~~~~~~g~~~~~~~~~~~~~~~~ 782 (817)
.+.|..| |+..+...+....
T Consensus 424 ~l~~~~g---~~~~~~~~~~~~~ 443 (496)
T PRK03893 424 LIAQRLD---LGTALASLSFSLT 443 (496)
T ss_pred HHhccCC---hHHHHHHHHHHHH
Confidence 9999976 6666655444433
No 54
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.88 E-value=2.6e-20 Score=213.41 Aligned_cols=399 Identities=13% Similarity=0.073 Sum_probs=264.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL 284 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~ 284 (817)
+....+..++...-...+..-+|.+.++ +|.+..+.++......++..+..+..|+++||+|||+. ...
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~----------l~~ 76 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRL----------LML 76 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHH
Confidence 4455556666666666677778888766 79999999999999999999999999999999999986 777
Q ss_pred HhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccc-cccccC-CCchhHHHHHHHhhhhhcccccccccceec
Q psy11734 285 GAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRV-NPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~-~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
+..+..++.......+ +.....+.-.+.+.+.+...+.... ...+.. +++|+++.|+......+|..+||.+.|.+.
T Consensus 77 ~~~~~~~~~~~~~~a~-~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~ 155 (495)
T PRK14995 77 GGTLFGLASLAAAFSP-TASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILL 155 (495)
T ss_pred HHHHHHHHHHHHHHcC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777777766666654 5554444444445555555444433 335554 479999999999999999999999999988
Q ss_pred ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccccc
Q psy11734 363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWN 442 (817)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~ 442 (817)
++. +||+.|++...+.++..++..+..++++++..
T Consensus 156 ~~~---------------------------------------------gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~~ 190 (495)
T PRK14995 156 EHF---------------------------------------------YWGSVFLINVPIVLVVMGLTARYVPRQAGRRD 190 (495)
T ss_pred ccC---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 765 69999999887777666655444443322111
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
+ +.++.-.....
T Consensus 191 ~---~~d~~g~~~~~----------------------------------------------------------------- 202 (495)
T PRK14995 191 Q---PLNLGHALMLI----------------------------------------------------------------- 202 (495)
T ss_pred C---CCChHhHHHHH-----------------------------------------------------------------
Confidence 1 11110000000
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchh--HHhh
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPW--AAIL 600 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~--~~~l 600 (817)
.+...+.+.+.. +. -+.. ...........++..+......+. - .+.|. .+++
T Consensus 203 ----~~~~~l~~~~~~---~~-~~~~--~~~~~~~~~~~~~~~l~~f~~~e~--------------~--~~~p~~~~~lf 256 (495)
T PRK14995 203 ----VAILLLVYSAKT---AL-KGFL--SLWVTSLTLLTGALLLGLFIRTQL--------------A--ASRPMIDMRLF 256 (495)
T ss_pred ----HHHHHHHHHHHh---cc-ccCC--chHHHHHHHHHHHHHHHHHHHHHh--------------c--CCCCCcCHHHh
Confidence 000000000000 00 0000 111111111111111111111100 0 11222 4688
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~ 680 (817)
|+|.++...+..++.....++...+.|.|+++++|+|+.+++....+..++..++.++.|++.||+|+|+.+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~-------- 328 (495)
T PRK14995 257 THRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVA-------- 328 (495)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHH--------
Confidence 999998888888888888899999999999999999999999999999999999999999999999986542
Q ss_pred HHHHHHHHHHHHHHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 681 FATLGAVLPGVGALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
..+..+..++..++.... .+.+......++.+++.+...+.......+..| ++++.+.++.++.+++|+.+|+.+
T Consensus 329 --~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai 406 (495)
T PRK14995 329 --TGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYELGAGLGIAI 406 (495)
T ss_pred --HHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHH
Confidence 355555555554443322 233444445556666666666666655555555 889999999999999999999999
Q ss_pred HHHhhcC
Q psy11734 758 VGFLTQN 764 (817)
Q Consensus 758 ~g~~~~~ 764 (817)
.|.+.++
T Consensus 407 ~g~i~~~ 413 (495)
T PRK14995 407 FGLLLSR 413 (495)
T ss_pred HHHHHHH
Confidence 9988764
No 55
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.88 E-value=9.4e-21 Score=212.10 Aligned_cols=374 Identities=16% Similarity=0.151 Sum_probs=246.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc-----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchh
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE-----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTN 276 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~-----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~ 276 (817)
++++....+..++..........++|.|.++ +|.+..+ .|.......+...++.++.|+++||++||+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----- 86 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIM----- 86 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHH-----
Confidence 3455566677777777877788889999987 6888665 3788888899999999999999999999875
Q ss_pred hHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccc
Q psy11734 277 VRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAP 355 (817)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~ 355 (817)
...+.....++...+...+ +.+...+...+.+.+.+. .+.......+ .++++|+++.++.+....+|..++|
T Consensus 87 -----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 159 (408)
T PRK09874 87 -----LLRSALGMGIVMVLMGLAQ-NIWQFLILRALLGLLGGF-VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGP 159 (408)
T ss_pred -----HHHHHHHHHHHHHHHHHHh-hHHHHHHHHHHHHHhhhh-HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 5556666566555554443 443333333333333332 3333334444 4457899999999999999999999
Q ss_pred cccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734 356 LTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 356 ~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
.+.+.+.+.. +|+..|++.+++.+++.+...++.+
T Consensus 160 ~~~~~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (408)
T PRK09874 160 LAGGLLADSY---------------------------------------------GLRPVFFITASVLFLCFLVTLFCIR 194 (408)
T ss_pred HHHHHHHHHh---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9988876653 6999999988877766655544433
Q ss_pred cccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734 436 GEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK 515 (817)
Q Consensus 436 ~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (817)
+++++.+++ + +
T Consensus 195 ~~~~~~~~~----------------------------------~-----------------------------------~ 205 (408)
T PRK09874 195 ENFQPVSKK----------------------------------E-----------------------------------M 205 (408)
T ss_pred cCcccccch----------------------------------h-----------------------------------h
Confidence 322110000 0 0
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP 595 (817)
Q Consensus 516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~ 595 (817)
.+ .. +
T Consensus 206 ~~--~~-------------------------------------------------------------------------~ 210 (408)
T PRK09874 206 LH--MR-------------------------------------------------------------------------E 210 (408)
T ss_pred hH--HH-------------------------------------------------------------------------H
Confidence 00 00 0
Q ss_pred hHHhhcCHhHHHH-HHHHHHHHHHHHHHHhhHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734 596 WAAILSSLPVWSL-IISEVGHDYGFYLISSDLPKYMSQVIGLSVA---ENGVLSALPFLIMWLVSMSSSALADYLIVRDI 671 (817)
Q Consensus 596 ~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 671 (817)
..+.+++|+.+.. ....+........+..+.|.|+.+..+.... ..+.+.....++.+++.+..|+++||++||+.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~ 290 (408)
T PRK09874 211 VVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI 290 (408)
T ss_pred HHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh
Confidence 0112233333222 2222233334444566778888775432221 24556666778889999999999999998875
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHH
Q psy11734 672 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS 750 (817)
Q Consensus 672 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 750 (817)
+ ..+..+..++++.....+ +.+......++.+++.+...+...+...+..| +++|+..++.+....+|
T Consensus 291 ~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g 359 (408)
T PRK09874 291 L----------ITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIG 359 (408)
T ss_pred H----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHH
Confidence 4 244444444444444433 44554455555566666666666666666665 78999999999999999
Q ss_pred HhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 751 GMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 751 ~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
..++|.+.|.+.|..+ |+..|++.+++.+++.+..+..
T Consensus 360 ~~~gp~~~G~l~~~~g---~~~~f~~~~~~~l~~~~~~~~~ 397 (408)
T PRK09874 360 NVTGPLMGAAISANYG---FRAVFLVTAGVVLFNAVYSWNS 397 (408)
T ss_pred HHhhHHHHHHHHhhcc---hhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999865 8899999999888887776654
No 56
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.88 E-value=4.9e-20 Score=210.19 Aligned_cols=386 Identities=16% Similarity=0.147 Sum_probs=263.1
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCc
Q psy11734 197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDI 271 (817)
Q Consensus 197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~ 271 (817)
.+..++|+.+......+..+...+.....+|.++++ .|.|..+.|.... .+... ++.++.|+++||+ |||+.
T Consensus 6 l~~~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~-~g~~~~~ig~~~~-~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~ 82 (491)
T PRK11010 6 LRIFQQPNSAILLILGFASGLPLALTSGTLQAWMTV-ENIDLKTIGFFSL-VGQAY-VFKFLWSPLMDRYTPPFLGRRRG 82 (491)
T ss_pred HHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCCHHHHHHHHH-HHHHH-HHHHHHHHHHHcccccCCCCchH
Confidence 356677888888888888888888888899999988 4999999988633 22222 6889999999999 77764
Q ss_pred ccchhhHHHHHHHHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh
Q psy11734 272 LSRTNVRKVFATLGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC 348 (817)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~ 348 (817)
.+..+.+...++...+.+..+ +.+.......+..++.....+...++..|..| |+|+++.++......
T Consensus 83 ---------~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~ 153 (491)
T PRK11010 83 ---------WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYR 153 (491)
T ss_pred ---------HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence 355666665555555544432 33344444444455555555556677777665 899999999999999
Q ss_pred hcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhh
Q psy11734 349 VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNV 428 (817)
Q Consensus 349 lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 428 (817)
+|..+++.+.+.+.+.. .+|+..|++.+++.++..+
T Consensus 154 lG~llg~~l~~~l~~~~--------------------------------------------~GWr~~f~i~a~l~ll~~l 189 (491)
T PRK11010 154 LAMLVSGGLALWLADRY--------------------------------------------LGWQGMYWLMAALLIPCII 189 (491)
T ss_pred HHHHHHHHHHHHHHhcc--------------------------------------------cCHHHHHHHHHHHHHHHHH
Confidence 99999988877766521 1799999999888777655
Q ss_pred hheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecc
Q psy11734 429 FFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKT 508 (817)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (817)
..++. |++++. +++ +
T Consensus 190 ~~~~~-~e~~~~-~~~----------------------------------~----------------------------- 204 (491)
T PRK11010 190 ATLLA-PEPTDT-IPV----------------------------------P----------------------------- 204 (491)
T ss_pred HHHhc-CCCccc-ccc----------------------------------c-----------------------------
Confidence 54443 221110 000 0
Q ss_pred cccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhh
Q psy11734 509 YTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGV 588 (817)
Q Consensus 509 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gi 588 (817)
+ + .. + +
T Consensus 205 ------~-~--~~-----------------------------~--------------------~---------------- 210 (491)
T PRK11010 205 ------K-T--LE-----------------------------Q--------------------A---------------- 210 (491)
T ss_pred ------c-c--hh-----------------------------h--------------------h----------------
Confidence 0 0 00 0 0
Q ss_pred hcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHH-HHHHHHHHHHHHHHHHHhhhh
Q psy11734 589 GEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSA-LPFLIMWLVSMSSSALADYLI 667 (817)
Q Consensus 589 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~-~~~~~~~ig~~~~g~l~dr~g 667 (817)
...++++.+++++.|......++.....+....+.|+|+.+++|+|..+.+.... ...++.++|.+++|+++||++
T Consensus 211 ---~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g 287 (491)
T PRK11010 211 ---VVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLS 287 (491)
T ss_pred ---HHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 0012455666777776666666777777777888999998889999999999874 566899999999999999999
Q ss_pred cccccccchhhHHHHHHHHHHHHHHH---HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH
Q psy11734 668 VRDILSRTNVRKVFATLGAVLPGVGA---LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS 743 (817)
Q Consensus 668 ~~~~~~~~~~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~ 743 (817)
+|+.+ ..+.++.++.. ..+....++.+.......+..++.+...+...+...+..+ +.+++..|+.
T Consensus 288 ~~~~l----------~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~~l~~~~~~~t~~gl~ 357 (491)
T PRK11010 288 LFRAL----------MIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLMTLCNKSFSATQFALL 357 (491)
T ss_pred HHHHH----------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHH
Confidence 87532 12222222222 2222222233333333333333334444555666667666 6799999999
Q ss_pred HHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 744 NGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 744 ~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+....+|+.+++.+.|.+.|..| |+..|.+.+++.+++.+.....++
T Consensus 358 ~s~~~lg~~~~~~~~G~l~~~~G---~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 358 SALSAVGRVYVGPVAGWFVEAHG---WPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999875 888999999998888877776643
No 57
>PRK11043 putative transporter; Provisional
Probab=99.88 E-value=3.9e-20 Score=206.59 Aligned_cols=346 Identities=16% Similarity=0.139 Sum_probs=233.2
Q ss_pred HHHHHHHHHHHHHHhhchhhH--HHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHh
Q psy11734 209 IISEVGHDYGLYLISTDLPKY--MSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGA 286 (817)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~p~~--l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~ 286 (817)
..........+++...+.|.+ +++.+|.|+.+.++......++..++++++|+++||+|||+. +..+.
T Consensus 9 ~~~~~~~~~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~ 78 (401)
T PRK11043 9 VYLAGLSMLGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPV----------LLAGL 78 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHH----------HHHHH
Confidence 333333444555555666655 556689999999999999999999999999999999999986 66666
Q ss_pred HHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 287 VLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+..++.....+.+ +.+...+...+.+.+.+...+.......|..| ++++...+..+....++..++|.+.+.+.+..
T Consensus 79 ~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 157 (401)
T PRK11043 79 SLFALGSLGMLWVE-SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHF 157 (401)
T ss_pred HHHHHHHHHHHHhc-CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 66666655555544 44444433333333333333334445556555 67888889998888999999999988877654
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI 445 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (817)
+|+..|++.+++.++..+...++.++++++ +
T Consensus 158 ---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~- 188 (401)
T PRK11043 158 ---------------------------------------------GWQAIFATLFAITLLLILPTLRLKPSKKAR---K- 188 (401)
T ss_pred ---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHcCCCCCcc---c-
Confidence 699999988887776665554443221100 0
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
.+ +
T Consensus 189 --------------------------------~~-----------------------------------~---------- 191 (401)
T PRK11043 189 --------------------------------QS-----------------------------------Q---------- 191 (401)
T ss_pred --------------------------------cc-----------------------------------h----------
Confidence 00 0
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV 605 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~ 605 (817)
. +.++++++|+|+.
T Consensus 192 ----------------------------------------------~--------------------~~~~~~~~~~~~~ 205 (401)
T PRK11043 192 ----------------------------------------------D--------------------ALTFKQLLKSKTY 205 (401)
T ss_pred ----------------------------------------------H--------------------HHHHHHHHcChhH
Confidence 0 0123456667777
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG 685 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 685 (817)
+...+...+....++.+..+.|.|+++ .|+++.+.+.......++..+|.+..+++.||+++|+.. ......
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~-------~~~~~~ 277 (401)
T PRK11043 206 LGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL-------PWLLVL 277 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH-------HHHHHH
Confidence 666666666666777788889998876 799999999888888889999999999999999887532 111122
Q ss_pred HHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734 686 AVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 686 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~ 764 (817)
..+..+.+...... .++.+.......+.++..+..++.......+..|+++|++.|+.+..+..++..++.+.|.+.|.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 278 FAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 22222222222221 22333334444455555566666666666677788999999999999999999999999999875
Q ss_pred C
Q psy11734 765 K 765 (817)
Q Consensus 765 ~ 765 (817)
.
T Consensus 358 ~ 358 (401)
T PRK11043 358 P 358 (401)
T ss_pred C
Confidence 4
No 58
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.88 E-value=1.7e-20 Score=208.11 Aligned_cols=343 Identities=16% Similarity=0.167 Sum_probs=238.0
Q ss_pred HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734 212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV 291 (817)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~ 291 (817)
.+.............|.+.+ .+|.|..+.+++.....++..+++++.|+++||+|||+. ...+..+..+
T Consensus 14 ~~~~~~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~----------~~~~~~~~~~ 82 (385)
T TIGR00710 14 SILGPLGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPV----------LLLGLFIFAL 82 (385)
T ss_pred HHHHHHHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHH----------HHHHHHHHHH
Confidence 33344444455555666555 489999999999999999999999999999999999885 6666666666
Q ss_pred HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCC
Q psy11734 292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINP 370 (817)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~ 370 (817)
+.......+ +.....+...+.+.+.+...+.......|..| ++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 83 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~----- 156 (385)
T TIGR00710 83 SSLGLALSN-NIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWL----- 156 (385)
T ss_pred HHHHHHHHc-cHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----
Confidence 666665554 44444444455555555555656666777655 78999999999999999999999988776653
Q ss_pred CCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhH
Q psy11734 371 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARY 450 (817)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (817)
+|+..|++.+++.++..+...++.++++++.++
T Consensus 157 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 189 (385)
T TIGR00710 157 ----------------------------------------SWHAIFAFLSLAGILLSALIFFILPETLPYEAR------- 189 (385)
T ss_pred ----------------------------------------CHHHHHHHHHHHHHHHHHHHHHhCCCCCCCccc-------
Confidence 699999988877776665544433322110000
Q ss_pred HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHH
Q psy11734 451 VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAF 530 (817)
Q Consensus 451 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~ 530 (817)
+ +.+
T Consensus 190 ----------------------------~-----------------------------------~~~------------- 193 (385)
T TIGR00710 190 ----------------------------I-----------------------------------QIS------------- 193 (385)
T ss_pred ----------------------------C-----------------------------------CHH-------------
Confidence 0 000
Q ss_pred HHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHH
Q psy11734 531 YYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLII 610 (817)
Q Consensus 531 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~ 610 (817)
+ . .+++++.+|+|+++...+
T Consensus 194 -----------------------------------------~--~-----------------~~~~~~~~~~~~~~~~~~ 213 (385)
T TIGR00710 194 -----------------------------------------T--Y-----------------FETFLLLLKSKMFWGYAL 213 (385)
T ss_pred -----------------------------------------H--H-----------------HHHHHHHHcCchhHHHHH
Confidence 0 0 012345677888888777
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHH
Q psy11734 611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPG 690 (817)
Q Consensus 611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~ 690 (817)
...+.....+....+.|.++++++|.++.+.+.+.....++.+++.++.|++.||+++|+.+ ..+..+..
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~----------~~~~~~~~ 283 (385)
T TIGR00710 214 IYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAKSLL----------RMGLILFA 283 (385)
T ss_pred HHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH----------HHHHHHHH
Confidence 77777778888888999999988999999999999999999999999999999999987643 23333333
Q ss_pred HHHHHHHhhc--C-ch-HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734 691 VGALAASYVG--C-NT-SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 691 ~~~~~~~~~~--~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~ 764 (817)
++.+++.... . +. ........+.+++.+...+.......|..|++++++.++.+...+.++.+.+.+.+...+.
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~~~~~~ 361 (385)
T TIGR00710 284 VSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVSLIHGN 361 (385)
T ss_pred HHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3333332221 1 12 2223333444455555566666667777788899999999999888666666666754443
No 59
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.88 E-value=4.3e-21 Score=212.07 Aligned_cols=367 Identities=17% Similarity=0.109 Sum_probs=244.7
Q ss_pred HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734 212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV 291 (817)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~ 291 (817)
+++.......+....|. +++.+|.|..+.+++.....++..++.++.|+++||+|||+. +..+..+..+
T Consensus 4 ~~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~~~~~~ 72 (379)
T TIGR00881 4 YAAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVF----------LPIGLILCAI 72 (379)
T ss_pred hhHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeeh----------hHHHHHHHHH
Confidence 44555566666666775 455589999999999999999999999999999999999986 6777777777
Q ss_pred HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccc-ccceecccccccC
Q psy11734 292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPL-TVGFLTQNIISIN 369 (817)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~-i~g~l~~~~~~~~ 369 (817)
+.+.....+ +.+...+...+.+.+.+...+.......+..| ++|+++.++.+....+|..++|. +.+.+.+.
T Consensus 73 ~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----- 146 (379)
T TIGR00881 73 VNLFFGFST-SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAEL----- 146 (379)
T ss_pred HHHHHHHhh-hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhc-----
Confidence 766666654 55555555555566666666777777777666 68999999999999999999985 44333322
Q ss_pred CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchh
Q psy11734 370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPAR 449 (817)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (817)
.+|+..|++.+++.++..++..++.+++++....+..+
T Consensus 147 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 184 (379)
T TIGR00881 147 ----------------------------------------YSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAE-- 184 (379)
T ss_pred ----------------------------------------CCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccc--
Confidence 16899999888777766555555444433221110000
Q ss_pred HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734 450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA 529 (817)
Q Consensus 450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~ 529 (817)
+ .++.+. +++.+..+++.
T Consensus 185 -----------------------------~---------~~~~~~-----------~~~~~~~~~~~------------- 202 (379)
T TIGR00881 185 -----------------------------E---------MPNEEP-----------DGDAEKKEEEL------------- 202 (379)
T ss_pred -----------------------------c---------Cccccc-----------ccccccccccc-------------
Confidence 0 000000 00000000000
Q ss_pred HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734 530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI 609 (817)
Q Consensus 530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~ 609 (817)
+ . .+...++++++|.+|...
T Consensus 203 ---------------------~--------------------~-------------------~~~~~~~~~~~~~~~~~~ 222 (379)
T TIGR00881 203 ---------------------T--------------------K-------------------KQIFLQYVLLNKVLWYIS 222 (379)
T ss_pred ---------------------c--------------------c-------------------hHHHHHHHHhcchHHHHH
Confidence 0 0 011235677889999998
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734 610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP 689 (817)
Q Consensus 610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 689 (817)
+..++.......+..+.|.|+++.+|+++.+.+...+...+++++++++.|++.||..+++. ...........
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~~~~~~~~ 295 (379)
T TIGR00881 223 LGYVFVYVVRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRR-------GPLAVFFMALI 295 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc-------hHHHHHHHHHH
Confidence 88888888999999999999999899999999999999999999999999999999754432 11111222222
Q ss_pred HHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc
Q psy11734 690 GVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 690 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g 766 (817)
.+++....... .+...........+.+.....+.......|..| ++|+++.|+.+...++++.++|.+.|.+.|+.|
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 296 IVSLLVYWLNPAANPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 22222222211 122222233333333333333444456677777 789999999999999999999999999999875
No 60
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.88 E-value=5.4e-23 Score=235.81 Aligned_cols=310 Identities=17% Similarity=0.145 Sum_probs=215.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|+|+++++++.....+|..+||.+++++.+ +.|||+.|++.+++.++..++.+
T Consensus 96 ~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~w~~~f~~~~~~~~~~~~~~~ 174 (485)
T TIGR00711 96 FRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIE-NYHWRWIFLINVPIGIIVVVVAF 174 (485)
T ss_pred HHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhcc-CcCceehhhhhhHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999 99999999999988888777777
Q ss_pred heeccCCCCCC-CCCHHHHhHhhhhccc--cccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734 81 ILCFNDPKSHP-YISEKERKYLLDSIGA--AERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG 157 (817)
Q Consensus 81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (817)
+..|++++.++ ..+..+.......... ....+.++.+|.+ .+.+....
T Consensus 175 ~~~~~~~~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~~~~~ 225 (485)
T TIGR00711 175 FILPRDKPAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFD-----------------------------SNEILILS 225 (485)
T ss_pred HHcCCccccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCC-----------------------------chHHHHHH
Confidence 76665433221 1111111000000000 0000111122221 11111111
Q ss_pred HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734 158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS 237 (817)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s 237 (817)
.........+ ..++.+++.+....+++|+|+++...+..++.+...++..+++|.|+++.+|++
T Consensus 226 ~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s 289 (485)
T TIGR00711 226 ITGLVAIIAF----------------VVWELTDDNPLVDLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYT 289 (485)
T ss_pred HHHHHHHHHH----------------HHHHHcCCCCccCHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1111111111 111112222223357899999999999999999999999999999999999999
Q ss_pred ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc-c-CC-ChhHHHHHHHHHH
Q psy11734 238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY-V-GC-NTSMVAIFFTIGM 314 (817)
Q Consensus 238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~-~~~~~~~~~~l~~ 314 (817)
+.++|+...+..++..+++++.|++.||+++|+. ...+..+..++...+.. . ++ +.........+.+
T Consensus 290 ~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 359 (485)
T TIGR00711 290 ALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKL----------VTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRG 359 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHH----------HHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999998875 56666666666665542 2 21 2333333344444
Q ss_pred HHhhhccccc-cccccccCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 315 AFMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 315 ~~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.+.+...+.. .....+.+++++++++|+.++.+++|+++|+.+.+.+.++..
T Consensus 360 ~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~~ 412 (485)
T TIGR00711 360 FGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNRT 412 (485)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4454444333 444455666899999999999999999999999999998653
No 61
>PRK10133 L-fucose transporter; Provisional
Probab=99.88 E-value=8.8e-21 Score=213.23 Aligned_cols=288 Identities=17% Similarity=0.184 Sum_probs=225.8
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHH
Q psy11734 448 ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVIL 527 (817)
Q Consensus 448 ~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~ 527 (817)
....-++..++.++.-.+++...+...|.+.+ ++|+|+.+.|++.
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~-----------------------------------~~~~s~~~~gl~~ 67 (438)
T PRK10133 23 SYIIPFALLCSLFFLWAVANNLNDILLPQFQQ-----------------------------------AFTLTNFQAGLIQ 67 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----------------------------------HhCCCHHHHHHHH
Confidence 34445567778888888899999998888877 9999999999999
Q ss_pred HHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH---HHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734 528 SAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT---PLIAHSGPVSMTVLRFLEGVGED------------- 591 (817)
Q Consensus 528 s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~---~~a~~~s~~~l~~~R~l~Gig~~------------- 591 (817)
+.+.+++.+++++.|++.||+|||+++..++++++++++++ .+++ +++.++++|+++|+|.+
T Consensus 68 ~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~--~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~ 145 (438)
T PRK10133 68 SAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIM--NYTLFLVGLFIIAAGLGCLETAANPFVTVL 145 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcC--CHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 99999999999999999999999999999999999999886 4577 99999999999999988
Q ss_pred -------------------------------c-Cc------------------hh-------------------------
Q psy11734 592 -------------------------------L-ET------------------PW------------------------- 596 (817)
Q Consensus 592 -------------------------------~-~~------------------~~------------------------- 596 (817)
. .. .+
T Consensus 146 ~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~ 225 (438)
T PRK10133 146 GPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALL 225 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 00 00
Q ss_pred --------------------------HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHH-HHHhCCChhHHHHHHHHHH
Q psy11734 597 --------------------------AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYM-SQVIGLSVAENGVLSALPF 649 (817)
Q Consensus 597 --------------------------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l-~~~~g~s~~~~~~~~~~~~ 649 (817)
++++++|+++...+..++.....++...|.|.|+ ++.+|+++.+++.......
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~ 305 (438)
T PRK10133 226 IMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTM 305 (438)
T ss_pred HHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHH
Confidence 0122344556666667777788888888999996 5678999999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy11734 650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPI 729 (817)
Q Consensus 650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (817)
+++++|++.++++.||+++|+++ ..+..+..+.+++....+ +. .....+.+.+++.+..+|..++...
T Consensus 306 ~~~~vG~~~~g~l~~r~g~~~~l----------~~~~~~~~~~~~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~ 373 (438)
T PRK10133 306 VCFFIGRFTGTWLISRFAPHKVL----------AAYALIAMALCLISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGI 373 (438)
T ss_pred HHHHHHHHHHHHHHHHcCHHHHH----------HHHHHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987653 244444444444443433 32 3345566678888888999998888
Q ss_pred ccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734 730 DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF 787 (817)
Q Consensus 730 ~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 787 (817)
+..|++.+++.++.. ...+++.++|.+.|.+.|..| +.+..|++...+.+.....
T Consensus 374 ~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g--~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 374 KNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAAG--NIPTAELIPALCFAVIFIF 428 (438)
T ss_pred cccchhhccchhHHh-HHhccchHHHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHH
Confidence 888888888888886 456789999999999999864 2456666555544444333
No 62
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.87 E-value=1.8e-20 Score=208.74 Aligned_cols=369 Identities=12% Similarity=0.103 Sum_probs=250.5
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734 206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG 285 (817)
Q Consensus 206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~ 285 (817)
+...+..++...+.+.+..++|.|+++++|.|+.+.|+...+..+...+.++++|+++||+++|+. +..+
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~----------l~~~ 82 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPM----------IVTG 82 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHH----------HHHH
Confidence 455677777888888889999999998899999999999999999999999999999999999886 6777
Q ss_pred hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
..+..++++.....+ +.+...+...+.+.+.+...+.......+.. +++|++++|+.+...++|..+||.+.+.+. .
T Consensus 83 ~~~~~~~~~~~~~~~-~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~ 160 (400)
T PRK11646 83 MLMRAAGFATMAIAH-EPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-Q 160 (400)
T ss_pred HHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 777777776665544 5554455455555555555555555556654 589999999999999999999999998876 3
Q ss_pred ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734 365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES 444 (817)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
. +|+..|++.++..++..++..+..+++++ +
T Consensus 161 ~---------------------------------------------g~~~~f~~~~~~~~~~~i~~~~~~~~~~~----~ 191 (400)
T PRK11646 161 Y---------------------------------------------DFRLVCATGAVLFVLAAAFNAWLLPAYKL----S 191 (400)
T ss_pred h---------------------------------------------hHHHHHHHHHHHHHHHHHHHHHhCCcccc----c
Confidence 2 69999998887766655443332221100 0
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
+ + .++.
T Consensus 192 --~-------------------------------~---------------------------------~~~~-------- 197 (400)
T PRK11646 192 --T-------------------------------V---------------------------------RTPV-------- 197 (400)
T ss_pred --c-------------------------------c---------------------------------chhh--------
Confidence 0 0 0000
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP 604 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~ 604 (817)
.+++++.+++|+
T Consensus 198 --------------------------------------------------------------------~~~~~~~~~~~~ 209 (400)
T PRK11646 198 --------------------------------------------------------------------REGMTRVLRDKR 209 (400)
T ss_pred --------------------------------------------------------------------HHHHHHHHcCch
Confidence 012345567777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccccchhhHHHHH
Q psy11734 605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILSRTNVRKVFAT 683 (817)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~~~r~~~~~ 683 (817)
++......+...........+.|.|+++..+ ++.+.+.+.+...+....+....+++.|| ++.++. ..
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~----------~~ 278 (400)
T PRK11646 210 FVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLEHR----------LM 278 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH----------HH
Confidence 6665555544444444456789999988655 67788888777777666666555666654 433321 13
Q ss_pred HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734 684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 762 (817)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~ 762 (817)
.++.+..+..+++...+ +.+.......+.+.+.+...+...+...+..| +++|++.|+.+...++|+.++|.+.|.+.
T Consensus 279 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~ 357 (400)
T PRK11646 279 AGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLF 357 (400)
T ss_pred HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHH
Confidence 45555555555555443 34333333344444445555666677777777 88999999999999999999999999999
Q ss_pred cCCcccc-HHHHHHHHHHHHHHHHHHHH
Q psy11734 763 QNKTLLE-WRVVFWIMFLTLFISNVFFV 789 (817)
Q Consensus 763 ~~~g~~~-~~~~~~~~~~~~~i~~~~~~ 789 (817)
|+.+..+ ....++..+.+.+++.+...
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 358 DLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred HHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 9863212 34555555555555554433
No 63
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.87 E-value=2.6e-20 Score=203.34 Aligned_cols=345 Identities=23% Similarity=0.326 Sum_probs=276.4
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHh
Q psy11734 207 SLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGA 286 (817)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~ 286 (817)
......++.....+......|.+.++ +|.+..+.+.......++..++.++.|+++||+|||+. +..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~----------~~~~~ 71 (352)
T cd06174 3 LLFLGFFLSGLDRGLLSPALPLLAED-LGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRV----------LLLGL 71 (352)
T ss_pred HHHHHHHHHHHhhhhhHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchh----------hHHHH
Confidence 44556667777788888888988877 69999999999999999999999999999999999986 77777
Q ss_pred HHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 287 VLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+..++.......+ +.........+.+.+.+...+.......|..| |+|++++++.+....+|..++|.+.+.+.+..
T Consensus 72 ~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 150 (352)
T cd06174 72 LLFALGSLLLAFAS-SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESL 150 (352)
T ss_pred HHHHHHHHHHHHhc-cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 77777766665553 55555555555566666666667777778776 69999999999999999999999998877653
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI 445 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (817)
+|+..|++.++..+++.+...++.
T Consensus 151 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~----------- 174 (352)
T cd06174 151 ---------------------------------------------GWRWLFLILAILGLLLALLLLFLL----------- 174 (352)
T ss_pred ---------------------------------------------hHHHHHHHHHHHHHHHHHHHHHHH-----------
Confidence 588888887777666555443321
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
T Consensus 175 -------------------------------------------------------------------------------- 174 (352)
T cd06174 175 -------------------------------------------------------------------------------- 174 (352)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV 605 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~ 605 (817)
|++
T Consensus 175 -----------------------------------------------------------------------------~~~ 177 (352)
T cd06174 175 -----------------------------------------------------------------------------RLL 177 (352)
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 345
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-ccccchhhHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD-ILSRTNVRKVFATL 684 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~-~~~~~~~r~~~~~~ 684 (817)
+......++..........+.|.++++..|.+..+.+.......++..++.+..+++.||+++|+ .+ ..
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~----------~~ 247 (352)
T cd06174 178 LLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLL----------LI 247 (352)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH----------HH
Confidence 55666677777788888899999999988999999999999999999999999999999999886 43 46
Q ss_pred HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
+..+..++.+.....+ +.+.......+.+.+.+...+.......|..| ++|++.+|+.+...++++.++|.+.|.+.|
T Consensus 248 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~ 326 (352)
T cd06174 248 GLLLAALGLLLLALAP-SLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLD 326 (352)
T ss_pred HHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6666666666666654 45556666666777777777878888888888 889999999999999999999999999998
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHHH
Q psy11734 764 NKTLLEWRVVFWIMFLTLFISNVFFVL 790 (817)
Q Consensus 764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~ 790 (817)
..+ |+..+.+.+++.+++.+..++
T Consensus 327 ~~~---~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 327 TGG---YGGVFLILAALALLAALLLLL 350 (352)
T ss_pred ccC---cchHHHHHHHHHHHHHHHhee
Confidence 754 788898888888887766543
No 64
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.87 E-value=4e-22 Score=225.95 Aligned_cols=311 Identities=15% Similarity=0.149 Sum_probs=207.6
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHH-HhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVL-ATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~i-g~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
|+++|++.|..+|...+.+.|++|+|+|+++++++..+..+|..+ +|.++..+.. ..|||+.|++.+++.++..++.+
T Consensus 127 ~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~~~~~l~~ 205 (452)
T PRK11273 127 LFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAW-FNDWHAALYMPAFAAILVALFAF 205 (452)
T ss_pred HHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH-hccHHHHHHHHHHHHHHHHHHHH
Confidence 788999999999988899999999999999999999999998754 5544444444 56999999999988888777777
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+++||+|++.+..++++.++... ...+..++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------------------------- 238 (452)
T PRK11273 206 AMMRDTPQSCGLPPIEEYKNDYP--DDYNEKHEQE--------------------------------------------- 238 (452)
T ss_pred HHccCCHhhcCCCChhhhhhccc--cccccccCCC---------------------------------------------
Confidence 77888776543222211100000 0000000000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
++.++. ...++|||.+|...+..++.+...++...|+|.|+++.+|++..
T Consensus 239 -----------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~ 289 (452)
T PRK11273 239 -----------------------------LTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFALD 289 (452)
T ss_pred -----------------------------ccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH
Confidence 000111 23478899999999999998888899999999999998899999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMG 318 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g 318 (817)
+++.+..+..++.+++.++.|+++||+++++. +........+..++...+.... .+.......+...+....
T Consensus 290 ~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~-------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 362 (452)
T PRK11273 290 KSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNR-------GATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIY 362 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCc-------chHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHH
Confidence 99998889999999999999999999954331 0012222222222222222221 122222222222222111
Q ss_pred hccccccccccccC-CCchhHHHHHHHhhhhhcccc-cccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734 319 FCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMV-APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA 396 (817)
Q Consensus 319 ~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~-~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (817)
...........|.. ++++|+++|+.+...++|+++ +|.+.|.+.|..
T Consensus 363 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~------------------------------- 411 (452)
T PRK11273 363 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------------------------------- 411 (452)
T ss_pred hHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHh-------------------------------
Confidence 11111223344544 479999999999999998765 799999998875
Q ss_pred cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734 397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
+|+..|++.+++.+++.+....+.+.|++++
T Consensus 412 --------------g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 412 --------------GWDGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred --------------cchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 5899999998888888777666655554443
No 65
>PRK12382 putative transporter; Provisional
Probab=99.87 E-value=8.9e-20 Score=203.10 Aligned_cols=367 Identities=13% Similarity=0.091 Sum_probs=236.1
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
.|+.++...+..++...........+|.++++.+|.|+.+.|+..+...++..+++++.|+++||+|||+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~--------- 83 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRS--------- 83 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHH---------
Confidence 34556667777777777777777889989888899999999999999999999999999999999999986
Q ss_pred HHHHHhHHHHHHHH---hhhccC----CChhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccc
Q psy11734 281 FATLGAVLPGVGAL---AASYVG----CNTSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGM 352 (817)
Q Consensus 281 ~~~~~~~~~~~~~~---~~~~~~----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~ 352 (817)
+..+.+...++.. .....+ ++.....+.-.+.+.+.+...+.......+ .++|+|++++++.+.....|..
T Consensus 84 -l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~ 162 (392)
T PRK12382 84 -ALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALA 162 (392)
T ss_pred -HHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHH
Confidence 5555444433322 111111 122333333334444444444444444445 4458999999999998889999
Q ss_pred ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734 353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL 432 (817)
Q Consensus 353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 432 (817)
++|.+.+.+.+.. +|+..+.+..+..++....
T Consensus 163 ~g~~~~~~l~~~~---------------------------------------------g~~~~~~~~~~~~~~~~~~--- 194 (392)
T PRK12382 163 AGAPLGLLLHSHF---------------------------------------------GFAALALTTMVLPLLAWAF--- 194 (392)
T ss_pred HHHHHHHHHHhcc---------------------------------------------ChHHHHHHHHHHHHHHHHH---
Confidence 9999988776543 5777666554443322221
Q ss_pred ecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734 433 FGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL 512 (817)
Q Consensus 433 ~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (817)
. ++.++..+++ + + .+
T Consensus 195 ~-~~~~~~~~~~----------------------------------~---------------------------~-~~-- 209 (392)
T PRK12382 195 N-GTVRKVPAHA----------------------------------G---------------------------E-RP-- 209 (392)
T ss_pred H-HhccCCCCCc----------------------------------c---------------------------c-Cc--
Confidence 1 1111100000 0 0 00
Q ss_pred cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhccc
Q psy11734 513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDL 592 (817)
Q Consensus 513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~ 592 (817)
++ .+. . |
T Consensus 210 --~~----~~~--~------------------------~----------------------------------------- 216 (392)
T PRK12382 210 --SL----WSV--V------------------------G----------------------------------------- 216 (392)
T ss_pred --hH----HHH--H------------------------H-----------------------------------------
Confidence 00 000 0 0
Q ss_pred CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734 593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL 672 (817)
Q Consensus 593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 672 (817)
... .+. ....+..........+.|.|+++ .|.+. .+.......++.+++++..|++.||+++|+.+
T Consensus 217 -----~~~-~~~-----~~~~l~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~ 282 (392)
T PRK12382 217 -----LIW-KPG-----LGLALQGVGFAVIGTFVSLYFAS-KGWAM--AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVA 282 (392)
T ss_pred -----HHH-HhH-----HHHHHHHHHHhHHHHHHHHHHHh-cCCch--hHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeh
Confidence 000 000 01111223344455677788876 46553 45556667788899999999999999998764
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHH
Q psy11734 673 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSG 751 (817)
Q Consensus 673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 751 (817)
..+..+..++.+++...+ +.+.......+.+.+.+...+.......+..| ++||++.|+.+...++++
T Consensus 283 ----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 351 (392)
T PRK12382 283 ----------IVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAY 351 (392)
T ss_pred ----------HHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 245555555555554443 44444444555555555555655555566665 889999999999999999
Q ss_pred hHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 752 MVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 752 ~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
.++|.+.|.+.|+.| |+..|...+.+.+++.+..+..
T Consensus 352 ~ig~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 352 GVSGPLAGMLATSFG---YPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHhC---chHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999875 8899999998888887776655
No 66
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.87 E-value=7.6e-22 Score=222.81 Aligned_cols=307 Identities=15% Similarity=0.192 Sum_probs=210.5
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.|..++.....+.|++|+|||++++++++.+..+|..+++++.+...+...|||+.|++.+++.++..+..++
T Consensus 125 ~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~ 204 (438)
T TIGR00712 125 LFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFA 204 (438)
T ss_pred HHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 77889999999999999999999999999999999999999999999887765441579999999999888887777777
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
++||+|++++..+.++.+. +... +..++.+.++
T Consensus 205 ~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~------------------------------------------- 237 (438)
T TIGR00712 205 MMRDTPQSCGLPPIEEYRN---DYPD-DYNEKAEQEL------------------------------------------- 237 (438)
T ss_pred hccCCHHhcCCCCchhccc---cccc-cccccccccc-------------------------------------------
Confidence 7787765432111110000 0000 0000000000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+.++. ...++|||.+|...+..++.....+++.+|+|.|+++.+|+|+.+
T Consensus 238 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 288 (438)
T TIGR00712 238 -----------------------------TAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALDK 288 (438)
T ss_pred -----------------------------chHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChhh
Confidence 00111 235789999999988888888888999999999999988999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~ 319 (817)
++++..+..+++.++++++|+++||+++++.. ...........++...+...+ .+.......+...++. .
T Consensus 289 ~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~ 359 (438)
T TIGR00712 289 SSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRG-------ATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL--I 359 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCccc-------HHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH--H
Confidence 99999999999999999999999999765421 011111111112222221111 1222222222221211 1
Q ss_pred ccccc--cccccccCC-CchhHHHHHHHhhhhhcc-cccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734 320 CYASI--RVNPIDLSP-NFSGTIMALSNGLGCVSG-MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV 395 (817)
Q Consensus 320 ~~~~~--~~~~~~~~p-~~~g~a~g~~~~~~~lg~-~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (817)
..+.. .....+..| ++||+++|+.+..+++|+ +++|.+.|.+.|+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~------------------------------ 409 (438)
T TIGR00712 360 YGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFF------------------------------ 409 (438)
T ss_pred ccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhc------------------------------
Confidence 11111 223445555 799999999999999875 68999999998875
Q ss_pred ccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
+|+..|++.+++.+++.+..+++.++|+
T Consensus 410 ---------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 437 (438)
T TIGR00712 410 ---------------GWDGGFMVMIGGSILAVILLIVVMIGEK 437 (438)
T ss_pred ---------------cchHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 5888999988888888888888777765
No 67
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.87 E-value=9.5e-20 Score=201.70 Aligned_cols=361 Identities=14% Similarity=0.209 Sum_probs=238.3
Q ss_pred HHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh
Q psy11734 218 GLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS 297 (817)
Q Consensus 218 ~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (817)
+.......+|.+.++ +|.|..+.++......++..+++++.|+++||+|||+. +..+..+..++...+.
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~----------~~~~~~~~~i~~~~~~ 74 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPV----------ILGGTLVFALAAVACA 74 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHH----------HHHHHHHHHHHHHHHH
Confidence 344455667777776 79999999999999999999999999999999999885 6677777777666665
Q ss_pred ccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCC
Q psy11734 298 YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPN 376 (817)
Q Consensus 298 ~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~ 376 (817)
..+ +.........+.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+.+..
T Consensus 75 ~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~----------- 142 (377)
T PRK11102 75 LAQ-TIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWF----------- 142 (377)
T ss_pred HHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-----------
Confidence 554 44444444445455555555555666666655 78999999999999999999999988776653
Q ss_pred CccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHH
Q psy11734 377 FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMG 456 (817)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~ 456 (817)
+|+..|++.+.+.++..++..++.++++++.+++
T Consensus 143 ----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 176 (377)
T PRK11102 143 ----------------------------------SWHAIFWVLALAAILAAALVFFFIPETLPKERRQ------------ 176 (377)
T ss_pred ----------------------------------ChHHHHHHHHHHHHHHHHHHHHhCCccCcccccC------------
Confidence 6999999888877766555443333321110000
Q ss_pred HHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHH
Q psy11734 457 CMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYIL 536 (817)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i 536 (817)
+.+
T Consensus 177 ----------------------------------------------------------~~~------------------- 179 (377)
T PRK11102 177 ----------------------------------------------------------PFH------------------- 179 (377)
T ss_pred ----------------------------------------------------------CCC-------------------
Confidence 000
Q ss_pred hhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHH
Q psy11734 537 THIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHD 616 (817)
Q Consensus 537 ~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~ 616 (817)
.|. . ..++++.+++|+.+...+..++..
T Consensus 180 -------------~~~-------------------~--------------------~~~~~~~~~~~~~~~~~~~~~~~~ 207 (377)
T PRK11102 180 -------------LRT-------------------T--------------------IRNFASLFRHKRVLGYMLASGFSF 207 (377)
T ss_pred -------------hHH-------------------H--------------------HHHHHHHHcChHHHHHHHHHHHHH
Confidence 000 0 012356677888877777777777
Q ss_pred HHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH---HHHH
Q psy11734 617 YGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP---GVGA 693 (817)
Q Consensus 617 ~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~---~~~~ 693 (817)
...+.+..+.|.++.+.+|+++.+.+.......++.++++++.|++.||+|+|+.+ ..+..+. .+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~----------~~~~~~~~~~~~~~ 277 (377)
T PRK11102 208 AGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGALNML----------RFGLWIQFIMGIWL 277 (377)
T ss_pred HHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH----------HHHHHHHHHHHHHH
Confidence 77888888899999988899999999999999999999999999999999988653 2333222 2222
Q ss_pred HHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHH-HHHhHHHHHHHHhhcCCccccHHH
Q psy11734 694 LAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNKTLLEWRV 772 (817)
Q Consensus 694 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~i~p~~~g~~~~~~g~~~~~~ 772 (817)
......+.+.+.......+.....+...+.......|..|++++++.++.+.... +++.+++.+.+. .+. .+..
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~~~~-~~~----~~~~ 352 (377)
T PRK11102 278 VVSALLDLGFWALVVGVAAFVGCVSMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALLSLA-PFT----SAWP 352 (377)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHhc-cCC----ChHH
Confidence 2222222223333333333333333333444455667778999999999887765 456666655432 222 1333
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy11734 773 VFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 773 ~~~~~~~~~~i~~~~~~~~ 791 (817)
.+...+++.+++.+..++.
T Consensus 353 ~~~~~~~~~~~~~~~~~~~ 371 (377)
T PRK11102 353 MVWSMAFCSILSILFYLYA 371 (377)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4444455555555444444
No 68
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.87 E-value=4e-20 Score=206.11 Aligned_cols=380 Identities=11% Similarity=0.048 Sum_probs=249.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
||.+|......++...++..+..++|.|+++.+|.|+.+.|.+.....++..++++..|+++||+|||+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~---------- 70 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKH---------- 70 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------
Confidence 6789999999999999999999999999999899999999999999999999999999999999999985
Q ss_pred HHHHhHHHHHHHH---hhhccCC---Chh-HHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhccccc
Q psy11734 282 ATLGAVLPGVGAL---AASYVGC---NTS-MVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA 354 (817)
Q Consensus 282 ~~~~~~~~~~~~~---~~~~~~~---~~~-~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~ 354 (817)
...+.....+... .....+. +.. ...+.....+.+.+...+.......+..+ +++...|.......+|.+++
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~~g 149 (396)
T TIGR00882 71 LLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVSR-NSNFEYGKARMFGCVGWALC 149 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhhh-hcccccchhhhhcccHHHHH
Confidence 3333222222211 1111110 011 11111112222333333333434334323 33456778888888999999
Q ss_pred ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
|.+.|.+.+. +|+..|++.+++.++..++..+..
T Consensus 150 ~~~~g~l~~~----------------------------------------------~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 150 ASIAGILFSI----------------------------------------------DPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred HHHHhhhhcc----------------------------------------------CchHHHHHHHHHHHHHHHHHHHhC
Confidence 9998876542 588999988887776665544433
Q ss_pred ccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccc
Q psy11734 435 SGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDA 514 (817)
Q Consensus 435 ~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (817)
++.+++.+++ .+ ..+ + +
T Consensus 184 ~~~~~~~~~~-~~-----------------------------~~~---------------------------~---~--- 200 (396)
T TIGR00882 184 PKAPSSATVA-NA-----------------------------LGA---------------------------N---A--- 200 (396)
T ss_pred CCCchhhhhh-cc-----------------------------ccc---------------------------c---c---
Confidence 2221110000 00 000 0 0
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCc
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLET 594 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~ 594 (817)
+-+ +.+
T Consensus 201 ~~~--------------------------------------------------------------------------~~~ 206 (396)
T TIGR00882 201 SAF--------------------------------------------------------------------------SLK 206 (396)
T ss_pred CCC--------------------------------------------------------------------------CHH
Confidence 000 001
Q ss_pred hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh---CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI---GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI 671 (817)
Q Consensus 595 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 671 (817)
+.++++|+|+++...+..++....+.....+.|.|+++.. +.+....+...+...+...++.+..|++.||+++|+.
T Consensus 207 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~ 286 (396)
T TIGR00882 207 LALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNA 286 (396)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh
Confidence 3456788888887777766666666667778899988865 4566678888888889999999999999999999875
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH-HHHHHHH
Q psy11734 672 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL-SNGLGCV 749 (817)
Q Consensus 672 ~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~-~~~~~~~ 749 (817)
+ ..+..+.++...+..... +++.......+.+.+.............+..+ +.++++.+. .+....+
T Consensus 287 l----------~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l 355 (396)
T TIGR00882 287 L----------LIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL 355 (396)
T ss_pred H----------HHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH
Confidence 4 355555555555544433 55555444444444433333333334445444 667776665 5788899
Q ss_pred HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734 750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV 789 (817)
Q Consensus 750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~ 789 (817)
|+.++|.+.|++.|..| |+..|.+.+++.++..+...
T Consensus 356 g~~~~~~l~G~l~~~~G---~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 356 AMIFLSTLAGNMYDSIG---FQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred HHHHHHHhHHHHHHhcc---cHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999876 88999998888887766544
No 69
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.86 E-value=2.2e-21 Score=222.13 Aligned_cols=269 Identities=15% Similarity=0.195 Sum_probs=174.8
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~ 72 (817)
+|++||+|.|+.+|.+.++++||+|+|+||++.++...+..+|..+|+.+...+. + .+|||++|++.++++
T Consensus 124 ~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~-~~gWR~~f~i~~~~~ 202 (490)
T PRK10642 124 CKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFL-DWGWRIPFFIALPLG 202 (490)
T ss_pred HHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhc-CccHHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999888888888886655432 3 579999999987665
Q ss_pred HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734 73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH 152 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (817)
++.. +....+||+|+ +...+++. .+. . ++. .
T Consensus 203 l~~~-~~~~~~~esp~---~~~~~~~~--~~~--~----~~~---~---------------------------------- 233 (490)
T PRK10642 203 IIGL-YLRHALEETPA---FQQHVDKL--EQG--D----REG---L---------------------------------- 233 (490)
T ss_pred HHHH-HHHHcCCCChh---HHHHHHhh--hhh--c----ccc---c----------------------------------
Confidence 5433 33334444432 11111100 000 0 000 0
Q ss_pred chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc-hh-HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS-LP-VWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~-~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
.++++.++++++++ +. ........++....+|++..|+|.|+
T Consensus 234 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 277 (490)
T PRK10642 234 ------------------------------------QDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYL 277 (490)
T ss_pred ------------------------------------cccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00013346666653 22 33333344556678889999999999
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH-HHHHhhhc-cCCChhHHHH
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG-VGALAASY-VGCNTSMVAI 308 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~ 308 (817)
++.+|++..++++......++..++.++.|+++||+|||+. +..+..+.. .+...+.. ..++......
T Consensus 278 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (490)
T PRK10642 278 SHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPF----------VILGSVALFVLAIPAFILINSNVIGLIFA 347 (490)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 88889998888888888889999999999999999999875 444433222 22221211 1222333333
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
...+.+++.+...+.......+..| +.|+++.|+.+.+..+++.++|.+.+.+.+..
T Consensus 348 ~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~ 405 (490)
T PRK10642 348 GLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVEST 405 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3333333333333334444445555 78999999877777778889999999887654
No 70
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.86 E-value=9.8e-20 Score=201.81 Aligned_cols=368 Identities=13% Similarity=0.038 Sum_probs=258.3
Q ss_pred HHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734 206 WSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG 285 (817)
Q Consensus 206 ~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~ 285 (817)
+...+.+++...+......++|.|+++ +|.|..+.|+......+...+++++.|+++||.+|+.. .++.... +
T Consensus 7 ~~l~~~~~~~~~~~~~~~p~l~~~l~~-~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~-----~~~~~~~-~ 79 (382)
T TIGR00902 7 RWLALGFFGYFCAYGIFLPFFPAWLKG-IGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIII-----ALRLLAL-A 79 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHH-----HHHHHHH-H
Confidence 445566666666666677889999987 69999999999999999999999999999999987542 1111111 1
Q ss_pred hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..+... .+....++.+...+...+.+.+.....+.......+ .++++++++|.......+|.+++|.+.|.+.++.
T Consensus 80 ~~l~~~---~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~-~~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~ 155 (382)
T TIGR00902 80 SAIFAA---AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANT-WQKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMF 155 (382)
T ss_pred HHHHHH---HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHH-HHHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 111111 111122344444444433444444444544444443 3477899999999999999999999999988775
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI 445 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (817)
+|+..|++.+.+.++..... .+.++.+++ +++
T Consensus 156 ---------------------------------------------g~~~~f~~~~~~~~~~~~~~-~~~~~~~~~-~~~- 187 (382)
T TIGR00902 156 ---------------------------------------------DEQNILAILTAGLAFMLIGF-LIKPTIPPK-DAI- 187 (382)
T ss_pred ---------------------------------------------ChhHHHHHHHHHHHHHHHHH-HcCCCCCCC-ccc-
Confidence 68888887765533333322 222111110 000
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
+. + +..
T Consensus 188 -~~------------------------------~-----------------------------------~~~-------- 193 (382)
T TIGR00902 188 -PE------------------------------D-----------------------------------ESQ-------- 193 (382)
T ss_pred -cc------------------------------c-----------------------------------ccc--------
Confidence 00 0 000
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV 605 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~ 605 (817)
..+++++++|+|++
T Consensus 194 ------------------------------------------------------------------~~~~~~~~l~~~~~ 207 (382)
T TIGR00902 194 ------------------------------------------------------------------GDSAFIALLKNPMN 207 (382)
T ss_pred ------------------------------------------------------------------cchhHHHHHcChHH
Confidence 00124577899999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG 685 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 685 (817)
|...+..++...+...+.++.|.|+++ .|.+..+++.......++.+++.++.+++.||+++|+.+ ..+
T Consensus 208 ~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l----------~~~ 276 (382)
T TIGR00902 208 LRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLL----------LIS 276 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHH----------HHH
Confidence 999999999999999999999999987 899999999999988899999999999999999987653 477
Q ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHH-HHHHHHhHHHHHHHHhhcC
Q psy11734 686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNG-LGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~-~~~~g~~i~p~~~g~~~~~ 764 (817)
.+...+...++.+.+ +.+.......+-++..+...+....+..+..+++++++.++.+. ...+|.+++|.+.|.+.|+
T Consensus 277 ~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~ 355 (382)
T TIGR00902 277 AIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCHLAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPT 355 (382)
T ss_pred HHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777766666644 56666767777777777777777777777744789999999874 4568999999999999999
Q ss_pred CccccHHHHHHHHHHHHHHHHHHH
Q psy11734 765 KTLLEWRVVFWIMFLTLFISNVFF 788 (817)
Q Consensus 765 ~g~~~~~~~~~~~~~~~~i~~~~~ 788 (817)
.+ + ..|+.++.+.+++.+..
T Consensus 356 ~g---~-~~~~~~~~~~~~~~~~~ 375 (382)
T TIGR00902 356 LG---A-GTFVFMAIIAAAAFFLI 375 (382)
T ss_pred cc---H-HHHHHHHHHHHHHHHHH
Confidence 85 4 55777777777665443
No 71
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.86 E-value=2.2e-21 Score=203.59 Aligned_cols=284 Identities=16% Similarity=0.165 Sum_probs=234.3
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC---cchhHHHHhhhHHHHHhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS---WANVFYIFGAIAVLWFAF 78 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g---Wr~~f~i~~~~~~i~~~~ 78 (817)
+.+.|++.| .+..++..+++|||||++|.++|+.. ..++|..+...++..++. ..| ||.+-.+..+..++..+.
T Consensus 112 gll~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~-~~g~~~w~~~~~i~~~~l~v~~v~ 188 (417)
T COG2223 112 GLLLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAV-AFGFLAWRNVAGIYVVALAIAAVL 188 (417)
T ss_pred HHHHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHH
Confidence 567788666 89999999999999999999999999 889999999999999999 888 999999999999998888
Q ss_pred hhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734 79 WCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF 158 (817)
Q Consensus 79 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (817)
.++..+|.|+.++..++.+
T Consensus 189 ~~~~~~d~p~~r~~~~~~~------------------------------------------------------------- 207 (417)
T COG2223 189 AWLGMNDVPEHRASVKPQL------------------------------------------------------------- 207 (417)
T ss_pred HHHHhCCChhhhccccccc-------------------------------------------------------------
Confidence 8888888775421111000
Q ss_pred HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734 159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV 238 (817)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 238 (817)
+...+.+++|++.|...+.++.+.+++-++..++|.|+++.+|.+.
T Consensus 208 ----------------------------------~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~ 253 (417)
T COG2223 208 ----------------------------------PAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSP 253 (417)
T ss_pred ----------------------------------hhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh
Confidence 0236778999999999999999999999999999999999999999
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC------CChhHHHHHHHH
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG------CNTSMVAIFFTI 312 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l 312 (817)
.++|.........+.+.++.+|+++||+|.+|. .......+.++...+.... .+.......+..
T Consensus 254 ~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv----------~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~ 323 (417)
T COG2223 254 VTAGLIAFLFPLIGALARPLGGWLSDRIGGRRV----------TLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLA 323 (417)
T ss_pred hhHHHHHHHHHHHHHHHHhccchhhhhccchhH----------HHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHH
Confidence 999999999999999999999999999999986 5555555555555554443 223333443444
Q ss_pred HHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734 313 GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS 392 (817)
Q Consensus 313 ~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (817)
...+.+.....+...+....|++.|.+.|+....+.+|+..-|...|...|.+|
T Consensus 324 l~~~~G~GnGsvfk~Ip~if~~~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg-------------------------- 377 (417)
T COG2223 324 LFVFAGLGNGSVFKMIPVIFPKETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTG-------------------------- 377 (417)
T ss_pred HHHHhccCcchheeechHHHHhhhhHHHHHHHHhccccccchhHHHHHHHHhcc--------------------------
Confidence 455666777777777888888999999999999999999999999999888875
Q ss_pred cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
+++..|++...+.+++.+.....++++
T Consensus 378 ------------------~~~~~f~~~~~~~~~a~v~~~~~y~r~ 404 (417)
T COG2223 378 ------------------SYTGAFMLLLAFYLVALVLTWALYARR 404 (417)
T ss_pred ------------------cHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 589999999999998888776666554
No 72
>TIGR00898 2A0119 cation transport protein.
Probab=99.86 E-value=7.9e-20 Score=210.65 Aligned_cols=277 Identities=17% Similarity=0.174 Sum_probs=204.3
Q ss_pred CCCCCCCceeeecccccccccccCC---hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh
Q psy11734 495 FPNANGNHTVVSKTYTTLDAKFDWD---ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI 571 (817)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~s---~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a 571 (817)
..|.+++.++.+...|.+.+|+|++ +.+.+++.+++.+++.+++++.|+++||+|||+++.++.++.+++.++++++
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~ 177 (505)
T TIGR00898 98 EPCLDGWEYSYDTFSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFS 177 (505)
T ss_pred CCCCCCcEecCCcccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHc
Confidence 4677888888777889999999999 9999999999999999999999999999999999999999999999999999
Q ss_pred hhcchHHHHHHHHHHhhhcc------------------------------------------------------------
Q psy11734 572 AHSGPVSMTVLRFLEGVGED------------------------------------------------------------ 591 (817)
Q Consensus 572 ~~~s~~~l~~~R~l~Gig~~------------------------------------------------------------ 591 (817)
+ +++.+++.|+++|++.+
T Consensus 178 ~--~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~wr~~~~~~~i~~~~ 255 (505)
T TIGR00898 178 P--NYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPDWRWLQLAVSLPTFL 255 (505)
T ss_pred c--cHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9 99999999999999998
Q ss_pred --------cC------------------------------------------------chhHHhhcCHhHHHHHHHHHHH
Q psy11734 592 --------LE------------------------------------------------TPWAAILSSLPVWSLIISEVGH 615 (817)
Q Consensus 592 --------~~------------------------------------------------~~~~~~l~~~~~~~~~~~~~~~ 615 (817)
.+ .++++++++|+++...+.....
T Consensus 256 ~~~~~~~~~esp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 335 (505)
T TIGR00898 256 FFLLSWFVPESPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMML 335 (505)
T ss_pred HHHHHHhcCCChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHH
Confidence 00 0123455566665554443332
Q ss_pred HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734 616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695 (817)
Q Consensus 616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 695 (817)
...........+.++ +..+.+.. .......+..+++.++.+++.||+|||+.+ ..+.++.++++++
T Consensus 336 ~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~i~~~~~~~~l~dr~grr~~~----------~~~~~~~~~~~l~ 401 (505)
T TIGR00898 336 WFTTAFSYYGLVLDL-GNLGGNIY---LDLFISGLVELPAKLITLLLIDRLGRRYTM----------AASLLLAGVALLL 401 (505)
T ss_pred HHHHHHHHHHHhccc-cccCCChH---HHHHHHHHHHHHHHHHHHHHHHHhCCHHHH----------HHHHHHHHHHHHH
Confidence 222221111222222 22455533 333455678889999999999999987653 4556666666666
Q ss_pred HHhhcCch-HHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHH
Q psy11734 696 ASYVGCNT-SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVV 773 (817)
Q Consensus 696 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~ 773 (817)
+.+.+... +.......+..++....++..+.+..|.+| +.|++++|+.+..+.+|++++|.+.+ +.+. + +...
T Consensus 402 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~~~-~---~~~~ 476 (505)
T TIGR00898 402 LLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-LGEK-W---LFLP 476 (505)
T ss_pred HHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HHHH-H---HhhH
Confidence 65554332 444444455555556667777788899999 77999999999999999999999998 4333 2 4567
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy11734 774 FWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 774 ~~~~~~~~~i~~~~~~~~~ 792 (817)
+.+.+++.+++.+..++++
T Consensus 477 ~~~~~~~~~~~~~~~~~lp 495 (505)
T TIGR00898 477 LVLFGGLALLAGILTLFLP 495 (505)
T ss_pred HHHHHHHHHHHHHHHHcCc
Confidence 7777777777766666553
No 73
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.86 E-value=2.9e-21 Score=217.74 Aligned_cols=256 Identities=12% Similarity=0.121 Sum_probs=174.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~ 72 (817)
+|++||+|.|+.+|.+.++++|++|+|||+++.++...+...|..+++.+...+. + .+|||++|++.+++.
T Consensus 130 ~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~gWr~~F~i~~~~~ 208 (432)
T PRK10406 130 ARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELR-EWGWRIPFALGAVLA 208 (432)
T ss_pred HHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh-ccchHHHHHHHHHHH
Confidence 4999999999999999999999999999999999999998899888887765543 2 579999999987766
Q ss_pred HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734 73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH 152 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (817)
++...+ ...+ ||++++ ++++ . +
T Consensus 209 ll~~~~-~~~~---~e~~~~----~~~~------~----~---------------------------------------- 230 (432)
T PRK10406 209 VVALWL-RRQL---DETSQQ----ETRA------L----K---------------------------------------- 230 (432)
T ss_pred HHHHHH-HhcC---CCCchH----HHhh------h----c----------------------------------------
Confidence 654322 2222 322211 1000 0 0
Q ss_pred chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHH-HHHHHHHhhchhhHHH
Q psy11734 153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGH-DYGLYLISTDLPKYMS 231 (817)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~-~~~~~~~~~~~p~~l~ 231 (817)
++.++++++|+|+.+...+...+. ...+|.+..|+|.|++
T Consensus 231 ---------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~ 271 (432)
T PRK10406 231 ---------------------------------------EAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLV 271 (432)
T ss_pred ---------------------------------------ccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 012467788999888776665543 6778889999999999
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH-hh--hccCCChhHHHH
Q psy11734 232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL-AA--SYVGCNTSMVAI 308 (817)
Q Consensus 232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~ 308 (817)
+.+|++..+++.......++..++.++.|+++||++||+. ...+..+..+... .. ....++......
T Consensus 272 ~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (432)
T PRK10406 272 NTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTS----------MLCFGSLAALFTVPILSALQNVSSPYAAFG 341 (432)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHHHHHcCCcHHHHHH
Confidence 8889999898888888888888999999999999998874 3333222222211 11 111112222222
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhh-cccccccccceecccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNI 365 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~ 365 (817)
.+.+..+..+...+.......|..| |+|++++|+.+.+.++ .+...|.+.+ +.+..
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~-~l~~~ 399 (432)
T PRK10406 342 LVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL-SLKSI 399 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH-HHHHh
Confidence 3333333333333445666777776 7899999999988775 3445677666 33443
No 74
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.86 E-value=1.8e-19 Score=201.45 Aligned_cols=284 Identities=13% Similarity=0.042 Sum_probs=208.4
Q ss_pred HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHH
Q psy11734 453 GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYY 532 (817)
Q Consensus 453 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~ 532 (817)
...+.+..+...++...+.+.+|.+.+ ++|.+.++.++..++|.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~p~l~~i~~-----------------------------------~~~~~~~~~~~~~s~~~~ 62 (413)
T PRK15403 18 PMALILYDFAAYLTTDLIQPGIINVVR-----------------------------------DFNADVSLAPASVSLYLA 62 (413)
T ss_pred HHHHHHHHHHHHHHHHhhccCHHHHHH-----------------------------------HhCCCHHHHHHHHHHHHH
Confidence 335566667778888889999988888 999999999999999999
Q ss_pred HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------------
Q psy11734 533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------------- 591 (817)
Q Consensus 533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------------- 591 (817)
++++++++.|.++||+|||+++..++++++++++++++++ |++.++++|+++|++.+
T Consensus 63 ~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~--~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~ 140 (413)
T PRK15403 63 GGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTT--SMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIK 140 (413)
T ss_pred HHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 9999999999999999999999999999999999999999 99999999999999877
Q ss_pred ---------------------------------------------------c------C---------chhHHhhcCHhH
Q psy11734 592 ---------------------------------------------------L------E---------TPWAAILSSLPV 605 (817)
Q Consensus 592 ---------------------------------------------------~------~---------~~~~~~l~~~~~ 605 (817)
+ + +++++++|||.+
T Consensus 141 ~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~ll~~~~~ 220 (413)
T PRK15403 141 LMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKRGAVPFSAKSVLRDFRNVFRNRLF 220 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccccCCCCChHHHHHHHHHHHcCHHH
Confidence 0 0 123467889999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG 685 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 685 (817)
|...+..++.....+.+..+.|.++++..|.++.+.++.......+..++..+.+++.+|..+++... .......++
T Consensus 221 ~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~---~~~~~~~ig 297 (413)
T PRK15403 221 LTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPRFIW---RAVPIQLVG 297 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHH---HHHHHHHHH
Confidence 99988888888888888899999999989999999999887788888888877777665444332210 000111122
Q ss_pred HHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734 686 AVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 686 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
..+...... ...++.+.......+.+.+.+...+..........+..+|++.++.+..+..+...++...+++.++.
T Consensus 298 ~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~~ 374 (413)
T PRK15403 298 LALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLIFPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFNG 374 (413)
T ss_pred HHHHHHHHH---HccccHHHHHHHHHHHHHHHHHHhHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 221111110 11212222334444455555555555553333333345899999999999999999999999988774
Q ss_pred ccccHHHHHHHHHHHHHH
Q psy11734 766 TLLEWRVVFWIMFLTLFI 783 (817)
Q Consensus 766 g~~~~~~~~~~~~~~~~i 783 (817)
. ...|...+++..+
T Consensus 375 ~----~~~~~~~~~~~~~ 388 (413)
T PRK15403 375 G----RLPFHLLAVVAGV 388 (413)
T ss_pred C----chHHHHHHHHHHH
Confidence 3 3455444444443
No 75
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.86 E-value=2.8e-20 Score=203.48 Aligned_cols=346 Identities=23% Similarity=0.322 Sum_probs=246.7
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHH
Q psy11734 209 IISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVL 288 (817)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~ 288 (817)
++..++...........+|.++++.+|.|..+.+++.....++..+++++.|+++||+|||+. +..+..+
T Consensus 2 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------l~~~~~~ 71 (352)
T PF07690_consen 2 FLAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRV----------LIIGLLL 71 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHH----------HHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeee----------Eeehhhh
Confidence 345556666666677777867777789999999999999999999999999999999999985 7777777
Q ss_pred HHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccc
Q psy11734 289 PGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIIS 367 (817)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~ 367 (817)
..++.+...+.. +.+.......+.+.+.+...+.......+..| ++|++++++.+....+|..++|.+.+.+.++.
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~-- 148 (352)
T PF07690_consen 72 FALGSLLLAFAS-NFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYF-- 148 (352)
T ss_dssp HHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHC--
T ss_pred hhhHHHHhhhhh-hHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhcc--
Confidence 777744444333 44456666666666666777777777777666 69999999999999999999999999888664
Q ss_pred cCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc-cccccccCCCC
Q psy11734 368 INPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS-GEVQYWNESIL 446 (817)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 446 (817)
+|+..|++.+++.+++.++..++.+ +++++..++..
T Consensus 149 -------------------------------------------~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~ 185 (352)
T PF07690_consen 149 -------------------------------------------GWRWAFLISAILSLIAAILFILFLPEPPPPRERESPK 185 (352)
T ss_dssp -------------------------------------------HHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SST
T ss_pred -------------------------------------------ccccccccccchhhhhhhhHhhhhhhccccccccccc
Confidence 6999999999999888775333322 22221111100
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
+. +
T Consensus 186 ~~------------------------------------------------------------------~----------- 188 (352)
T PF07690_consen 186 ES------------------------------------------------------------------E----------- 188 (352)
T ss_dssp TT------------------------------------------------------------------T-----------
T ss_pred cc------------------------------------------------------------------c-----------
Confidence 00 0
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch-hHHhhcCHhH
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP-WAAILSSLPV 605 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~-~~~~l~~~~~ 605 (817)
.-.+ + ...+ ++++.++|.+
T Consensus 189 ------------------------------------------~~~~--~----------------~~~~~~~~~~~~~~~ 208 (352)
T PF07690_consen 189 ------------------------------------------SKKP--K----------------PLKPGFKSLFKNPVL 208 (352)
T ss_dssp --------------------------------------------HH--H----------------CCCH-CTHHHHHHCC
T ss_pred ------------------------------------------cccc--c----------------ccccccccccccchh
Confidence 0000 0 1112 5667777777
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLS-VAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL 684 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 684 (817)
|......++.....+....+.|.|+++.+|.+ ..+.+.......+.+.++.++.|+++||+++++.. .....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-------~~~~~ 281 (352)
T PF07690_consen 209 WILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRRL-------LIAIL 281 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH-------HHHHH
T ss_pred hhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH-------HHHHH
Confidence 76666667777788889999999988889999 89999999999999999999999999999976432 12222
Q ss_pred HHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHH
Q psy11734 685 GAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAP 755 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p 755 (817)
...+..+.+...... .+.........+.+++.+...+.......+..| +++|++.|+.+...++++.++|
T Consensus 282 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 282 LLILGALGLLLLPFS-SSPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHCCSHHH-CHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 222222222222222 133444445555666667777888888888887 8899999999999999999998
No 76
>KOG2533|consensus
Probab=99.85 E-value=1.7e-21 Score=216.77 Aligned_cols=276 Identities=15% Similarity=0.140 Sum_probs=200.8
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-----cccCcchhHHHHhhhHHHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-----FTASWANVFYIFGAIAVLW 75 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-----~~~gWr~~f~i~~~~~~i~ 75 (817)
+|++.|+.+++.+|....+++.||.++||++.+|++.+..++|+++|..+...+.+ ...||||.|++.|.++++.
T Consensus 140 lr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~ 219 (495)
T KOG2533|consen 140 LRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVL 219 (495)
T ss_pred HHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999999988632 2689999999999999999
Q ss_pred HhhhhheeccCCCCCCCCCHHHHhHhhhhcccccccc-ccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734 76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRK-DAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL 154 (817)
Q Consensus 76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (817)
.++.++++|+.|++.+..+++|+....++.++..... ++++
T Consensus 220 gi~~f~~lp~~P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~-------------------------------------- 261 (495)
T KOG2533|consen 220 GIVVFFFLPDNPSKAWFLTDEEKELVVERLRESPSGGIENKF-------------------------------------- 261 (495)
T ss_pred HheEEEEecCChhhccccchHHHHHHHHHHHhccCCCccccc--------------------------------------
Confidence 9999999999999887777666544433333211111 1101
Q ss_pred hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734 155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI 234 (817)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~ 234 (817)
++..+++.+++|.+|...+..++.....+++.+|+|.|+.+..
T Consensus 262 -------------------------------------~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~ 304 (495)
T KOG2533|consen 262 -------------------------------------KWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG 304 (495)
T ss_pred -------------------------------------CHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC
Confidence 2334789999999999999999999999999999999999966
Q ss_pred CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHH
Q psy11734 235 GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGM 314 (817)
Q Consensus 235 g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 314 (817)
|+|..+++.+..|..++++++.+++|.++||...- ...|........+...++...+.... ........+..+.
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~-----~~~~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~ 378 (495)
T KOG2533|consen 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTI-----FARRLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGP 378 (495)
T ss_pred CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcc
Confidence 79999999999999999999999999999996400 01122234444444445545554442 3333333333333
Q ss_pred HHhhhccccccccccc-cCC-CchhHHHHHHHhhhhhcccccccc
Q psy11734 315 AFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 315 ~~~g~~~~~~~~~~~~-~~p-~~~g~a~g~~~~~~~lg~~~~~~i 357 (817)
.+.....+......++ ..+ .++-+..++.......+++++|++
T Consensus 379 ~~~~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~ 423 (495)
T KOG2533|consen 379 YGLIATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQL 423 (495)
T ss_pred hhhHHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhh
Confidence 3333333333333333 344 345555555555566666666554
No 77
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.85 E-value=6.3e-19 Score=199.46 Aligned_cols=383 Identities=18% Similarity=0.128 Sum_probs=280.2
Q ss_pred HhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhH
Q psy11734 199 ILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVR 278 (817)
Q Consensus 199 l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~ 278 (817)
-+|||.|...++...+.+.+......-.+-++.+ ..-|+...+++.....+..++.++++|.++||++||++
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrri------- 77 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRI------- 77 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHH-------
Confidence 4889999999999999888888888778877766 47788889999999999999999999999999999986
Q ss_pred HHHHHHHhHHHHHHHHh---hhccC-CChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734 279 KVFATLGAVLPGVGALA---ASYVG-CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV 353 (817)
Q Consensus 279 ~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~ 353 (817)
+.....+..+.... +.... .+.+..++..++.+.+..+..|...+...++.| ++...++++++...++...+
T Consensus 78 ---li~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~i 154 (524)
T PF05977_consen 78 ---LILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARII 154 (524)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhc
Confidence 44444444322222 22222 245556666666677777778888888888666 68999999999999999999
Q ss_pred cccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734 354 APLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF 433 (817)
Q Consensus 354 ~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 433 (817)
||.++|.+.... |...+|.+-++..+++......+
T Consensus 155 GPalgG~Lva~~---------------------------------------------G~~~~f~inalsfl~~i~~l~~~ 189 (524)
T PF05977_consen 155 GPALGGILVAFF---------------------------------------------GAAAAFLINALSFLISILALLRW 189 (524)
T ss_pred cchHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHHHHHHHHHc
Confidence 999999988765 45667777776666554443333
Q ss_pred cccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccc
Q psy11734 434 GSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLD 513 (817)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (817)
+++ .++.+.+ .+ .+.
T Consensus 190 ~~~-~~~~~~~-~e---------------------------------------------------------------~~~ 204 (524)
T PF05977_consen 190 KPP-PPPSSLP-RE---------------------------------------------------------------RFF 204 (524)
T ss_pred ccc-ccccccc-hh---------------------------------------------------------------hhh
Confidence 222 1110000 00 000
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC
Q psy11734 514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE 593 (817)
Q Consensus 514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~ 593 (817)
+++ +
T Consensus 205 ~~l----------------------------------------------------------------------------~ 208 (524)
T PF05977_consen 205 SAL----------------------------------------------------------------------------R 208 (524)
T ss_pred hhH----------------------------------------------------------------------------H
Confidence 000 1
Q ss_pred chhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Q psy11734 594 TPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILS 673 (817)
Q Consensus 594 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~ 673 (817)
..++-+.++|.+.......++++.....+...+|.+.++.+|.++...|++.+..++++++|.++.+++.+|+++++.+
T Consensus 209 ~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv- 287 (524)
T PF05977_consen 209 EGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLV- 287 (524)
T ss_pred HHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhh-
Confidence 1234445567666666655666666666677799999999999999999999999999999999999999998876643
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHh
Q psy11734 674 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGM 752 (817)
Q Consensus 674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~ 752 (817)
..+.+..+++++.+.+.+ +.+.....+++.+++.........+..++..| +.||+++++.+++...+..
T Consensus 288 ---------~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~ 357 (524)
T PF05977_consen 288 ---------LLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMP 357 (524)
T ss_pred ---------HHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHH
Confidence 356666666666666654 56666666677777766666777777888888 7799999999999999999
Q ss_pred HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
+|..+.|.+.|..| .+.++.+.++..+++.++....+
T Consensus 358 lGsll~G~la~~~g---~~~al~~a~~~lll~~~~~~~~~ 394 (524)
T PF05977_consen 358 LGSLLWGFLADHFG---VRTALLIAGAALLLSALIALRFP 394 (524)
T ss_pred HHHHHHHHHHHHhC---HHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999986 56677777776666666665553
No 78
>PRK09952 shikimate transporter; Provisional
Probab=99.85 E-value=6e-21 Score=215.25 Aligned_cols=289 Identities=16% Similarity=0.168 Sum_probs=196.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-------cccCcchhHHHHhhhHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-------FTASWANVFYIFGAIAV 73 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-------~~~gWr~~f~i~~~~~~ 73 (817)
+|++||++.|+.+|.+.+++.|++|+|||++..+....+..+|..++..+..++.. ..+|||+.|++.+++.+
T Consensus 131 ~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l 210 (438)
T PRK09952 131 LRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVL 210 (438)
T ss_pred HHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999888776652 14799999998876544
Q ss_pred HHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccc
Q psy11734 74 LWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHT 153 (817)
Q Consensus 74 i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (817)
+... ..+..||++++.+.+++. ++ .+
T Consensus 211 ~~~~----l~~~~~es~~~~~~~~~~------~~----~~---------------------------------------- 236 (438)
T PRK09952 211 IALW----VRNGMEESAEFEQQQHEQ------AA----AK---------------------------------------- 236 (438)
T ss_pred HHHH----HHHhCCCChhHHHHHhhc------cc----cc----------------------------------------
Confidence 3221 112223332211110000 00 00
Q ss_pred hhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHH-HHHHHHHHHHHHhhchhhHHH
Q psy11734 154 LGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLII-SEVGHDYGLYLISTDLPKYMS 231 (817)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i-~~~~~~~~~~~~~~~~p~~l~ 231 (817)
++.+ .+.++|+|+.+...+ ..++.....|....|.|.|++
T Consensus 237 --------------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~ 278 (438)
T PRK09952 237 --------------------------------------KRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYST 278 (438)
T ss_pred --------------------------------------ccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0112 234667777665543 455667788888899999999
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc---cCCChhHHHH
Q psy11734 232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY---VGCNTSMVAI 308 (817)
Q Consensus 232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 308 (817)
+.+|++...........++...++.++.|+++||++||+. ...+.++..++...+.. ..++......
T Consensus 279 ~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (438)
T PRK09952 279 QNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRV----------YITGALIGTLSAFPFFMALEAQSIFWIVFF 348 (438)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH----------HHHHHHHHHHHHHHHHHHHHcCChHHHHHH
Confidence 8889888765555556677888899999999999999875 34444433333222211 1212222233
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccccccceecccccccCCCCCCCCCccchhhccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSN 386 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (817)
...+.+++.+...+.......|..| ++|+++.|+.+.+.. ++++++|.+.+.+.|..+
T Consensus 349 ~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~-------------------- 408 (438)
T PRK09952 349 SIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFG-------------------- 408 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcC--------------------
Confidence 3334344555555556677778666 789999999776654 899999999999887542
Q ss_pred CccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 387 GLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
.+|...+.+.+++.+++.+..+..+
T Consensus 409 -----------------------~~~~~~~~~~~~~~~i~~v~~~~~~ 433 (438)
T PRK09952 409 -----------------------GSWHSVAIYLLAGCLISAMTALLMK 433 (438)
T ss_pred -----------------------CCchHHHHHHHHHHHHHHHHHHHcc
Confidence 1477888888888888887776553
No 79
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.85 E-value=6.7e-19 Score=196.16 Aligned_cols=270 Identities=18% Similarity=0.209 Sum_probs=209.5
Q ss_pred hHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHH
Q psy11734 449 RYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILS 528 (817)
Q Consensus 449 ~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s 528 (817)
.++.+.++.+..+...+....+.+..|.+.+ |+|+|+.+.+++.+
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~p~~~~i~~-----------------------------------~~~~s~~~~~~~~~ 50 (394)
T PRK11652 6 NVNLLFMLVLLVAVGQMAQTIYVPAIADMAR-----------------------------------DLNVREGAVQAVMA 50 (394)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhccHHHHHH-----------------------------------HhCCCHHHHHHHHH
Confidence 3455555666666777777888888888888 99999999999999
Q ss_pred HHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-----------------
Q psy11734 529 AFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED----------------- 591 (817)
Q Consensus 529 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~----------------- 591 (817)
.+.+++.+++++.|+++||+|||+++.++.+..+++.+++.+++ +++.+++.|+++|++.+
T Consensus 51 ~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 128 (394)
T PRK11652 51 AYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAH--SLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGT 128 (394)
T ss_pred HHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHc--cHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHH
Confidence 99999999999999999999999999999999999999999999 99999999999999876
Q ss_pred -------------------------------------------------------c------------CchhHHhhcCHh
Q psy11734 592 -------------------------------------------------------L------------ETPWAAILSSLP 604 (817)
Q Consensus 592 -------------------------------------------------------~------------~~~~~~~l~~~~ 604 (817)
+ ..++++.+|+|+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (394)
T PRK11652 129 QLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPADARRTRVLASYRTLLSNRR 208 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccccchhHHHHHHHHHHcChH
Confidence 0 011345677888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734 605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL 684 (817)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 684 (817)
++...+..+........+..+.|.++++.+|.+..+.+.......++..++..+.+++.||.+++. .....
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~---------~~~~~ 279 (394)
T PRK11652 209 FNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTLM---------WQSVI 279 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHH
Confidence 877666666666666667778889999989999999999888888888889999999999987432 11122
Q ss_pred HHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 685 GAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
......+........ ..+.+.......+.+++.+...+.......+..|+++|++.++.+....+|+.+++.+.+.+.+
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 280 CCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 222222222222221 1233444445555666666677777777788889999999999999999999999999998766
Q ss_pred C
Q psy11734 764 N 764 (817)
Q Consensus 764 ~ 764 (817)
.
T Consensus 360 ~ 360 (394)
T PRK11652 360 T 360 (394)
T ss_pred C
Confidence 5
No 80
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.85 E-value=5.6e-20 Score=202.64 Aligned_cols=360 Identities=18% Similarity=0.136 Sum_probs=237.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734 204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT 283 (817)
Q Consensus 204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~ 283 (817)
+++...+..++.....+....+.|.++++.+|.|..+.+++.....++..++.++.|+++||+|||+. +.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~----------~~ 71 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYT----------TT 71 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHH----------HH
Confidence 46777888888888889999999988888899999999999999999999999999999999999986 66
Q ss_pred HHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 284 LGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
.+..+..++.+...+.+++.+...+...+.+.+.+. .........+..| ++|+++.++.....++|..+++.+.+.+.
T Consensus 72 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~ 150 (366)
T TIGR00886 72 LSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPII 150 (366)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 777777777666655541333333333333333332 2333445556554 79999999999999999888888877665
Q ss_pred ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHH-HHHHHHHHhhhhheeecccccccc
Q psy11734 363 QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFW-IMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
+..... .++....+|++.|+ +.+++..+..++..++.++++++.
T Consensus 151 ~~~~~~-----------------------------------~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (366)
T TIGR00886 151 GSLIFG-----------------------------------AGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGK 195 (366)
T ss_pred HHHHhc-----------------------------------ccccccccccchhHHHHHHHHHHHHHHHHHhcccCCccc
Confidence 532100 00011236898884 334444433333333323322110
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
+++ .+. + .+ . + ..+.
T Consensus 196 ~~~-~~~------------------------------~---------~~--~-------------~-------~~~~--- 210 (366)
T TIGR00886 196 PAT-GKL------------------------------S---------FK--G-------------A-------RWSV--- 210 (366)
T ss_pred ccc-hhc------------------------------c---------cc--c-------------c-------cccc---
Confidence 000 000 0 00 0 0 0000
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
+ + . + ..+.++.++
T Consensus 211 ------------------------~----~--------------------~--~-----------------~~~~~~~~~ 223 (366)
T TIGR00886 211 ------------------------G----T--------------------G--A-----------------LGDQLKVFR 223 (366)
T ss_pred ------------------------c----c--------------------h--h-----------------HHHHHHHHh
Confidence 0 0 0 0 001345677
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
+|++|...+..++.....+.+..+.|.|+++.+|.++.+++.+.....+.+++++++.|+++||+|+|+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~--------- 294 (366)
T TIGR00886 224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARKL--------- 294 (366)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchhH---------
Confidence 88888888888888888888999999999999999999999999999999999999999999999987542
Q ss_pred HHHHHHHHHHHHHHHHhhcC---chHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHH
Q psy11734 682 ATLGAVLPGVGALAASYVGC---NTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSG 751 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 751 (817)
..+......+..++..... +.+.......+.....+...+..+....+..|+++|+++|+.+..+++|+
T Consensus 295 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 295 -LMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred -HHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 1233333333333332221 23333444444555556666667777888889999999999999988763
No 81
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.85 E-value=1.2e-20 Score=214.92 Aligned_cols=299 Identities=12% Similarity=0.054 Sum_probs=204.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc--------cccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS--------FTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~--------~~~gWr~~f~i~~~~~ 72 (817)
.|+++|++.+.. +.....++|++|+++|++++|+......+|..+++.+.+.+.. ...|||+.|++.+++.
T Consensus 130 ~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~ 208 (476)
T PLN00028 130 VRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLH 208 (476)
T ss_pred HHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHH
Confidence 388999998865 4456789999999999999999988777777777666654422 0258999999999988
Q ss_pred HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734 73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH 152 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (817)
+++.++.+++.+++|+++ .++.+++ .. .++.
T Consensus 209 l~~~l~~~~~~~~~p~~~--~~~~~~~------~~---~~~~-------------------------------------- 239 (476)
T PLN00028 209 IIMGILVLTLGQDLPDGN--YRELKKS------GT---MPKD-------------------------------------- 239 (476)
T ss_pred HHHHHHHHHHcCcCCCCc--hhhHHhc------Cc---cccc--------------------------------------
Confidence 888777766655544321 0000000 00 0000
Q ss_pred chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy11734 153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE 232 (817)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~ 232 (817)
.....+++.++++++|...+..++.....+....|+|.|+.+
T Consensus 240 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~ 281 (476)
T PLN00028 240 --------------------------------------SFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYD 281 (476)
T ss_pred --------------------------------------cHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 001125677889999988888777777778888899999988
Q ss_pred hhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHH
Q psy11734 233 VIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTI 312 (817)
Q Consensus 233 ~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 312 (817)
.+|++..+++.+.....+++.++++++|+++||+++|+. ...|+........+.++.++.+.... +.......+.+
T Consensus 282 ~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~---~~~r~~~~~~~~~l~~i~~~~~~~~~-~~~~~~~~~~l 357 (476)
T PLN00028 282 RFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFG---MRGRLWALWIVQTLGGVFCIWLGRAN-SLGAAIVVMIL 357 (476)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcC---cchhHHHHHHHHHHHHHHHHHhcccc-hHHHHHHHHHH
Confidence 889999999999999999999999999999999998752 11244444444444444444333333 33333333333
Q ss_pred HHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccc
Q psy11734 313 GMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVS 392 (817)
Q Consensus 313 ~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (817)
..++.+...+.......++.|+++|++.|+.+...++|+.++|.+.+ ..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~g~lg~~i~~~l~~----~~~-------------------------- 407 (476)
T PLN00028 358 FSIFVQAACGATFGIVPFVSRRSLGVISGLTGAGGNVGAVLTQLLFF----TGS-------------------------- 407 (476)
T ss_pred HHHHHHHhhhhhcccCcccChhhchhhhhhhhccccHHHHHHHHHHH----hcC--------------------------
Confidence 44444344444555566778899999999998877777777665533 110
Q ss_pred cccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 393 GMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
..+|+..|++.+++.+++.++.++....+
T Consensus 408 ----------------~~~y~~~f~~~~~~~~i~~~~~~~~~~~~ 436 (476)
T PLN00028 408 ----------------SYSTETGISLMGVMIIACTLPVAFIHFPQ 436 (476)
T ss_pred ----------------CccHhhHHHHHHHHHHHHHHHHHheeccc
Confidence 12599999999998888888877765333
No 82
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.85 E-value=6e-21 Score=212.25 Aligned_cols=285 Identities=16% Similarity=0.170 Sum_probs=205.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc-CcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA-SWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~-gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|+++|+|.+...+...+++.|++| |||+++++++.++...|..+|+.+++++.+ +. +||+.+.+.+...++.....
T Consensus 103 ~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~-~~~~w~~~~~~~~~~~~~~~~~~ 180 (393)
T PRK09705 103 SALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQ-HSETWYQTLAWWALPAVVALFAW 180 (393)
T ss_pred HHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHH
Confidence 3899999999999999999999996 889999999999999999999999999988 64 89999887765554443333
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+...+++|+++ ++ +
T Consensus 181 ~~~~~~~~~~~------~~--------~---------------------------------------------------- 194 (393)
T PRK09705 181 WWQSAREVASS------HK--------T---------------------------------------------------- 194 (393)
T ss_pred HHHhcCCCccc------cC--------C----------------------------------------------------
Confidence 32222222110 00 0
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
+.+.++.+++|..+...+..++....+++...|.|.|+++ +|.+..
T Consensus 195 ---------------------------------~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~ 240 (393)
T PRK09705 195 ---------------------------------TTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQ 240 (393)
T ss_pred ---------------------------------CcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence 0001234567777777777777788888999999999988 799999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
++|....+..+++++++++.|++.||.++|+. ...+..+..++...+...+++..... ..+.+.+.+.
T Consensus 241 ~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~----------~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~g~ 308 (393)
T PRK09705 241 YSGSLLALMTLGQAAGALLMPAMARHQDRRKL----------LMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGLGG 308 (393)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccchHH----------HHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhccc
Confidence 99999999999999999999999999998875 55555555555554433332222221 2222333333
Q ss_pred cccccc-ccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734 320 CYASIR-VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP 397 (817)
Q Consensus 320 ~~~~~~-~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (817)
..+... ....+.+| +++++++|+.+.+.++++.++|.+.|.+.|..|
T Consensus 309 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g------------------------------- 357 (393)
T PRK09705 309 AFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISG------------------------------- 357 (393)
T ss_pred hHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-------------------------------
Confidence 334333 23344544 689999999999999999999999999999865
Q ss_pred ccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc-ccccC
Q psy11734 398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV-QYWNE 443 (817)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~-~~~~~ 443 (817)
+|+..|++.+++.+++.++...+.+|++ +.|.|
T Consensus 358 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK09705 358 -------------NYLMDWAFHALCVVGLMIITLRFAPARFPQLWVK 391 (393)
T ss_pred -------------CchHHHHHHHHHHHHHHHHHHHhccccccchhcc
Confidence 5788888888888877776555555543 33433
No 83
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.85 E-value=1.3e-18 Score=193.63 Aligned_cols=346 Identities=14% Similarity=0.097 Sum_probs=218.0
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734 203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA 282 (817)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~ 282 (817)
|-+....+..+....+.......+|.+.++ +|.|..+.++......++..++.++.|+++||+|||+. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~----------l 71 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPV----------A 71 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHH----------H
Confidence 334455555566666666666778887766 79999999999999999999999999999999999885 6
Q ss_pred HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhccccccccccee
Q psy11734 283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
..+..+..++.......+ +.........+.+.+.+...+.......|.. +++|+++.++.+....++..++|.+.+.+
T Consensus 72 ~~~~~~~~i~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l 150 (392)
T PRK10473 72 IPGAALFIIASLLCSLAE-TSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLI 150 (392)
T ss_pred HHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666665544 4333333333344444444444455666655 48999999999999999999999887766
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
.+.. +|+..|++.+++.++..++..+..++++++.
T Consensus 151 ~~~~---------------------------------------------g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (392)
T PRK10473 151 MLKF---------------------------------------------PWQSLFYTMAAMGILVLLLSLFILKETRPAR 185 (392)
T ss_pred HhCc---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence 5443 6999999988877766655444333322110
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
+++ +. +..
T Consensus 186 ~~~----------------------------------------------------------------------~~--~~~ 193 (392)
T PRK10473 186 APA----------------------------------------------------------------------AS--SKP 193 (392)
T ss_pred cCC----------------------------------------------------------------------cc--chH
Confidence 000 00 000
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
+..++.++
T Consensus 194 ------------------------------------------------------------------------~~~~~~~~ 201 (392)
T PRK10473 194 ------------------------------------------------------------------------RENSESLL 201 (392)
T ss_pred ------------------------------------------------------------------------HHHHHHHh
Confidence 01123455
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
+|+++.......+.......+..+.|.++++.+|++..+.+.......+.++++.++.+++.||+++|+.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~~--------- 272 (392)
T PRK10473 202 NRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPRTLM--------- 272 (392)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH---------
Confidence 66655544444444444555666778888888999999999999999999999999999999999987643
Q ss_pred HHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--CchHHHHHHHHHHHHHHHhHHHHHHH
Q psy11734 682 ATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVG 759 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~p~~~g 759 (817)
..+..+..++.+.+.... +.+.......+...+.+...+.. ...+..| +..+.+.++ ..++..++|.+.+
T Consensus 273 -~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~----~~~~~~~g~~~~~ 344 (392)
T PRK10473 273 -LTSQVLFLAAGITLALSP-SHAVSLFGITLICAGFSVGFGVA--MSQALGPFSLRAGVASST----LGIAQVCGSSLWI 344 (392)
T ss_pred -HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccccHHHHH----HHHHHHHHHHHHH
Confidence 345555455554444433 22222222222222222222222 2233334 333444444 4455566666666
Q ss_pred HhhcCCc
Q psy11734 760 FLTQNKT 766 (817)
Q Consensus 760 ~~~~~~g 766 (817)
.+.+..+
T Consensus 345 ~l~~~~g 351 (392)
T PRK10473 345 WLAAVLG 351 (392)
T ss_pred HHHHHhc
Confidence 6666655
No 84
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.85 E-value=2.9e-18 Score=194.65 Aligned_cols=435 Identities=11% Similarity=0.050 Sum_probs=273.6
Q ss_pred hhch-hHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccch
Q psy11734 200 LYSL-PVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRT 275 (817)
Q Consensus 200 ~~~~-~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~ 275 (817)
+++| .++...+..++...++|+...++|.|+++. +|++..++|.......++..++++++|+++|| +|||+.
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~---- 81 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKT---- 81 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHH----
Confidence 4554 466777788888999999999999999986 89999999999999999999999999999999 799986
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C---chhHHHHHHHhhhhhcc
Q psy11734 276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSG 351 (817)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~---~~g~a~g~~~~~~~lg~ 351 (817)
+..+..+..++...+...+ +.........+.+.+.+...+.......+..| + +|+++.++.+...++|+
T Consensus 82 ------l~~~~~~~~~g~~~~~~~~-~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~ 154 (475)
T TIGR00924 82 ------MVLGGIVLMLGHFMLAMSI-YPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGS 154 (475)
T ss_pred ------HHHHHHHHHHHHHHHHhcc-cHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHH
Confidence 7777777777777766544 33333334444455555666666666666554 3 38889999999999999
Q ss_pred cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734 352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV 431 (817)
Q Consensus 352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~ 431 (817)
++||.+.+.+.++. +|+..|.+.++..+++.+.++
T Consensus 155 ~ig~~l~g~l~~~~---------------------------------------------g~~~~f~~~~~~~~~~~l~~~ 189 (475)
T TIGR00924 155 FISPLLAGVIAENY---------------------------------------------GYHVGFNLAAVGMVIGLLTFF 189 (475)
T ss_pred HHHHHHHHHHHHhc---------------------------------------------ChHHHHHHHHHHHHHHHHHHH
Confidence 99999999887654 699999998877777666555
Q ss_pred eecccccccc-cCC-CC--ch---hHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCcee
Q psy11734 432 LFGSGEVQYW-NES-IL--PA---RYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTV 504 (817)
Q Consensus 432 ~~~~~~~~~~-~~~-~~--~~---~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 504 (817)
+..+..++.. +++ .. +. ++.......+....
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------------------ 227 (475)
T TIGR00924 190 AGRHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVF------------------------------------------ 227 (475)
T ss_pred HcccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHH------------------------------------------
Confidence 4443221110 000 00 00 00000000000000
Q ss_pred eecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHH
Q psy11734 505 VSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRF 584 (817)
Q Consensus 505 ~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~ 584 (817)
..++..++-.......................+
T Consensus 228 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 260 (475)
T TIGR00924 228 -----------------------------------FCAWLMHHVVIANILLMTVTLAVIIFFFRLAFK------------ 260 (475)
T ss_pred -----------------------------------HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHh------------
Confidence 000000000000000000000000000000000
Q ss_pred HHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH----HHHHHHHHHHHHHHHHHHHH
Q psy11734 585 LEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE----NGVLSALPFLIMWLVSMSSS 660 (817)
Q Consensus 585 l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~----~~~~~~~~~~~~~ig~~~~g 660 (817)
+.....+-.|.+.+..+.+...++...+....+.+|.+.++..+.+... .+++.++..+..++..++..
T Consensus 261 -------~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~ 333 (475)
T TIGR00924 261 -------PRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLA 333 (475)
T ss_pred -------ccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHH
Confidence 0001111122234455555555666666666677888877754544322 66788888888888887766
Q ss_pred HHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh--------cCchHHHHHHHHHHHHHHhhhhhhhhhhccccC
Q psy11734 661 ALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV--------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS 732 (817)
Q Consensus 661 ~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 732 (817)
++-.|.+||+.- .....=..+++++.+++++.+... ..+.++.+...++.+.+..+..|.......+..
T Consensus 334 ~~~~~l~~~~~~---~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~a 410 (475)
T TIGR00924 334 MIWTRLGRKGKD---PTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIA 410 (475)
T ss_pred HHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 665666654210 001111256777776666665531 236677788888888888888888889999998
Q ss_pred C-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 733 P-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 733 ~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
| +.||+.+|+......+|..+++.+.....+..+ |...|..++...++..+..+...
T Consensus 411 P~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 411 PQRLMGQMLGMWFLAQAMGSLLGGYLATFGAVPQG---VTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---hhhHHHHHHHHHHHHHHHHHHHH
Confidence 8 679999999999999999999999887766643 66777777777777666665553
No 85
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.85 E-value=1.9e-19 Score=201.48 Aligned_cols=266 Identities=10% Similarity=0.120 Sum_probs=205.2
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCc-hHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGG-KHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-- 591 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-- 591 (817)
|+|+|..|.|++.+++.+++.+++++.|+++||+|| |+++.++.+..+++..+..+.+ +++.+++.|++.|++.+
T Consensus 32 ~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 109 (418)
T TIGR00889 32 TLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVT--TPAGMFPVLLANSLAYMPT 109 (418)
T ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHccH
Confidence 899999999999999999999999999999999965 7789999999999999999998 99999999999888532
Q ss_pred ----------------------------------------------------------------------cC--------
Q psy11734 592 ----------------------------------------------------------------------LE-------- 593 (817)
Q Consensus 592 ----------------------------------------------------------------------~~-------- 593 (817)
++
T Consensus 110 ~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G~lG~~ig~~l~g~l~~~~~~~~f~~~~~~~~~~~~~~~~~~e~~~~~~~~ 189 (418)
T TIGR00889 110 IALTNSISYANLPQAGLDVVTDFPPIRVMGTIGFIAAMWAVSLLDIELSNIQLYITAGSSALLGVFALTLPDIPVAKSTA 189 (418)
T ss_pred HHHHHHHHHHHHhhcCCCchhcCCCeeeehhHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHhcCCCCCCCcccc
Confidence 00
Q ss_pred -c--------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCCh--------hHHHHHHHHHHHHHHHHH
Q psy11734 594 -T--------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSV--------AENGVLSALPFLIMWLVS 656 (817)
Q Consensus 594 -~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~--------~~~~~~~~~~~~~~~ig~ 656 (817)
. +.++++|+|+++...+..++..........+.|.|+++ .|.++ ...+...+...+..+++.
T Consensus 190 ~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~ 268 (418)
T TIGR00889 190 KMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIWMSLSQFSEIFFI 268 (418)
T ss_pred ccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHHHHHHHHHHHHHH
Confidence 0 01246677887777777777766666677888999877 45443 566888889999999999
Q ss_pred HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCch---HHHHHHHHHHHHHHhhhhhhhhhhccccCC
Q psy11734 657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT---SMVAICFTIGMAFMGFCYASIRVNPIDLSP 733 (817)
Q Consensus 657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 733 (817)
+..|+++||+|+|+.+ ..+.++..++..++.....+. +..+...++.+...+...+.......|..|
T Consensus 269 ~~~g~l~dr~g~r~~l----------~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p 338 (418)
T TIGR00889 269 LTIPFFLKRFGIKKVM----------LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVP 338 (418)
T ss_pred HHHHHHHHHhCcHHHH----------HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 9999999999988654 466666666555555432222 223333444455445555665677788888
Q ss_pred -CchHHHHHHHH-HHHHHHHhHHHHHHHHhhcCCcc---ccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 734 -NFSGTIMALSN-GLGCVSGMVAPLTVGFLTQNKTL---LEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 734 -~~~g~~~g~~~-~~~~~g~~i~p~~~g~~~~~~g~---~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
++|+++.|+.+ ....+|+.++|.+.|.+.|+.+. .+|+.+|.+.+++.+++.+.++++-+
T Consensus 339 ~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~ 403 (418)
T TIGR00889 339 VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFK 403 (418)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 78999999997 56788999999999999998753 35999999888888887777766644
No 86
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.85 E-value=7e-19 Score=195.03 Aligned_cols=360 Identities=15% Similarity=0.073 Sum_probs=245.7
Q ss_pred HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734 212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV 291 (817)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~ 291 (817)
+++...+...+..++|.|+++ +|.|..+.|+......++..+++++.|+++||.+|++. .++.+... ..+..
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~-----~~~~~~~~-~~~~~- 84 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIP-----ALRLLALL-TLLFA- 84 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHH-----HHHHHHHH-HHHHH-
Confidence 455556667777789999987 69999999999999999999999999999999998542 11222222 11111
Q ss_pred HHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCC
Q psy11734 292 GALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPI 371 (817)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~ 371 (817)
.......++.+...+...+.+.+.+...+...+...+. +++++.+.+.......+|.++||.+.+.+.++.
T Consensus 85 --~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~------ 155 (382)
T PRK11128 85 --VAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWF------ 155 (382)
T ss_pred --HHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHc------
Confidence 12222233444444444434444444555444444444 456788888888888999999999999998875
Q ss_pred CCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHH
Q psy11734 372 DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYV 451 (817)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (817)
+|+..|++.++..++..+...+. ++++++ +++
T Consensus 156 ---------------------------------------g~~~~f~~~~~~~~~~~~~~~~~-~~~~~~-~~~------- 187 (382)
T PRK11128 156 ---------------------------------------GEQAILWILTAGVASMLLGQLLR-PTIMPQ-GES------- 187 (382)
T ss_pred ---------------------------------------ChhHHHHHHHHHHHHHHHHHHcc-CCCCCc-ccc-------
Confidence 69999988776555544433322 211100 000
Q ss_pred HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734 452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY 531 (817)
Q Consensus 452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~ 531 (817)
+-+..+
T Consensus 188 ---------------------------------------------------------------~~~~~~----------- 193 (382)
T PRK11128 188 ---------------------------------------------------------------RQQESA----------- 193 (382)
T ss_pred ---------------------------------------------------------------cccccc-----------
Confidence 000000
Q ss_pred HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHH
Q psy11734 532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIIS 611 (817)
Q Consensus 532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~ 611 (817)
...++++++|+|++|.....
T Consensus 194 ------------------------------------------------------------~~~~~~~i~~~~~~~~~~~~ 213 (382)
T PRK11128 194 ------------------------------------------------------------GWPAWKALLKEPTVWRFLLC 213 (382)
T ss_pred ------------------------------------------------------------ccchHHHHHcChhHHHHHHH
Confidence 01235678899999998888
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH
Q psy11734 612 EVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV 691 (817)
Q Consensus 612 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~ 691 (817)
.++.........++.|.|+++ .|.+..+.+.+.+...+..++..+..|++.||+++|+.+ ..+....++
T Consensus 214 ~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l----------~~~~~~~~~ 282 (382)
T PRK11128 214 VSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLL----------LLSAICGVV 282 (382)
T ss_pred HHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH----------HHHHHHHHH
Confidence 888888888888899999976 799999999999988899999999999999999987643 356666666
Q ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHH-HHHHHhHHHHHHHHhhcCCccccH
Q psy11734 692 GALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGL-GCVSGMVAPLTVGFLTQNKTLLEW 770 (817)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~i~p~~~g~~~~~~g~~~~ 770 (817)
..+++...+ +.+......++.+++.+...+.......+..++++++..++.+.. ...|..++|.+.|.+.|..+ +
T Consensus 283 ~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g---~ 358 (382)
T PRK11128 283 RWGLMGSTT-ALPWLIVIQILHCGTFTVCHLAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLG---A 358 (382)
T ss_pred HHHHHHhhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---H
Confidence 655555543 556555566666666666566666666666666778889988744 45677999999999999985 3
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11734 771 RVVFWIMFLTLFISNV 786 (817)
Q Consensus 771 ~~~~~~~~~~~~i~~~ 786 (817)
..++..+++.+++..
T Consensus 359 -~~~~~~~~~~~~~~~ 373 (382)
T PRK11128 359 -GVFWVMALVALPALF 373 (382)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 456666666555443
No 87
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.84 E-value=1.6e-18 Score=193.62 Aligned_cols=372 Identities=15% Similarity=0.105 Sum_probs=236.9
Q ss_pred HHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCcccchhhHHHHHH
Q psy11734 209 IISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDILSRTNVRKVFAT 283 (817)
Q Consensus 209 ~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~~~~~~~~~~~~~ 283 (817)
...++.++....-...-+|.|+++ .|+|.++.|+....... .+..+++|+++||+ ||||. .+.
T Consensus 5 ~~l~~~~~~~~~~~~~~~~~~l~~-~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~---------~l~ 72 (402)
T PRK11902 5 LLLGFASGLPLALTSGTLQAWMTV-EGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRG---------WLL 72 (402)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchh---------HHH
Confidence 445566666666677889999998 59999999988665554 58899999999999 66653 255
Q ss_pred HHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734 284 LGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF 360 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~ 360 (817)
.+..+.++++..+.+.++ +.+.......+..++.....+...+...|..| |+|+++.++......+|..+++.+.+.
T Consensus 73 ~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~ 152 (402)
T PRK11902 73 LTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALW 152 (402)
T ss_pred HHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHH
Confidence 666666655555555432 23333333233344444555556666777665 679999999998888899988888776
Q ss_pred ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
+.+.. .+|+..|++.+++.++..+...+. ++++++
T Consensus 153 l~~~~--------------------------------------------~gw~~~f~i~a~~~l~~~l~~~~~-~e~~~~ 187 (402)
T PRK11902 153 LADRV--------------------------------------------LGWGNTYLLMAGLMLAGALTTLWA-PEPEVP 187 (402)
T ss_pred HHhcc--------------------------------------------cCHHHHHHHHHHHHHHHHHHHHhc-CCCccc
Confidence 65532 169999999888776655543332 221110
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734 441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE 520 (817)
Q Consensus 441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 520 (817)
+++ + + + .
T Consensus 188 -~~~--~-------------------------------------------------------------------~-~--~ 194 (402)
T PRK11902 188 -ARP--P-------------------------------------------------------------------R-S--L 194 (402)
T ss_pred -ccc--c-------------------------------------------------------------------c-h--h
Confidence 000 0 0 0 0
Q ss_pred hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734 521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL 600 (817)
Q Consensus 521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l 600 (817)
. |. . .+++++++
T Consensus 195 ~-----------------------------~~-----------------~----------------------~~~~~~l~ 206 (402)
T PRK11902 195 G-----------------------------EA-----------------V----------------------VGPLRDFF 206 (402)
T ss_pred H-----------------------------HH-----------------H----------------------HHHHHHHH
Confidence 0 00 0 02356788
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRK 679 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~ 679 (817)
|+|.++...+..++..........+.+.++.+++|+++++.+.+....+ ++.+++.+++|++.||+++|+.+
T Consensus 207 ~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l------- 279 (402)
T PRK11902 207 SRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSL------- 279 (402)
T ss_pred hCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHH-------
Confidence 8998888777777766655555556677788878999999998876654 56899999999999999987542
Q ss_pred HHHHHHHHHHHHHHH---HHHhhcCchHHHHHHHHHHHHH----HhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHh
Q psy11734 680 VFATLGAVLPGVGAL---AASYVGCNTSMVAICFTIGMAF----MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGM 752 (817)
Q Consensus 680 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 752 (817)
..+..+..+..+ .+...+++.+.......+..+. .+..+.......++..| ++..+..+....++..
T Consensus 280 ---~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~ 353 (402)
T PRK11902 280 ---MLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS---ATQYALLSALASVGRV 353 (402)
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHH
Confidence 223332222222 2223332334333333322222 22333334445555555 3345566666667777
Q ss_pred HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
+++.+.|.+.|..| |+..|...+++.+++.+..+..+++
T Consensus 354 ~~~~~~G~l~~~~G---~~~~f~~~~~~~~~~~~~~~~~~~~ 392 (402)
T PRK11902 354 YVGPTSGYLVEAYG---WPGFYLMTVVIALPGLALLWLMRGT 392 (402)
T ss_pred HHHHHHHHHHHHhC---hHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 67778999999986 8888988888888877666554333
No 88
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.84 E-value=6.3e-21 Score=211.40 Aligned_cols=278 Identities=15% Similarity=0.131 Sum_probs=198.6
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.|...+....++.|++|++||++++++...+..+|..+++++++++.+ ..|||++|++.+++.++..+..+
T Consensus 97 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 97 GRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQ-EFSWRYTFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhh-hccHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999 89999999999887777766655
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+||.+++++ .+.
T Consensus 176 ~~lp~~~~~~~---~~~--------------------------------------------------------------- 189 (382)
T PRK10091 176 FWVPDIRDEAK---GGL--------------------------------------------------------------- 189 (382)
T ss_pred HhCCCCCcccc---cCH---------------------------------------------------------------
Confidence 55555322110 000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+ +..+.+|++..+...+..++.....+....++|.++++.+|+++.+
T Consensus 190 --------------------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 236 (382)
T PRK10091 190 --------------------------------R-EQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS 236 (382)
T ss_pred --------------------------------H-HHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0 0123466777777666666666666666777888888888999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh-hh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM-GF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-g~ 319 (817)
.+.+..+..+++.+++++.|++.||+++|+. ...+..+.+++.+.+....++.+.......+...+. +.
T Consensus 237 ~~~~~~~~~~~~~ig~~~~g~l~~r~~~~~~----------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 306 (382)
T PRK10091 237 MTFIMMLVGLGMVLGNLLSGRLSGRYSPLRI----------AAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFAL 306 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHheeccccCchhH----------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999998875 555555555555444333323333333222222222 22
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL 398 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (817)
..+.......+.+| +.++.+ ..+...++|+++||.+.|.+.|..+
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~~~Gp~~~G~l~~~~~-------------------------------- 352 (382)
T PRK10091 307 SAPLQILLLQNAKGGELLGAA--GGQIAFNLGSAIGAYCGGMMLTLGL-------------------------------- 352 (382)
T ss_pred hHHHHHHHHHhCCcchHHHHH--HHHHHHHHHHHHHHHHhHHHHHccc--------------------------------
Confidence 22222233334433 455554 3467788999999999999998753
Q ss_pred cccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
+|+..+.+.+++.+++......+.
T Consensus 353 ------------~~~~~~~~~~~~~~~~~~~~~~~~ 376 (382)
T PRK10091 353 ------------AYNYVALPAALLSFAAMSSLLLYG 376 (382)
T ss_pred ------------CcchHHHHHHHHHHHHHHHHHHHh
Confidence 688888888877776664444333
No 89
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.84 E-value=2.5e-20 Score=208.13 Aligned_cols=285 Identities=15% Similarity=0.109 Sum_probs=203.6
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhH-HHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGS-VLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~-~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|+++|+|.+...+...+.+.+++|+|||++++|+.+++.++|. .++|++++++.+ ..||+..+|......++..++.
T Consensus 111 ~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~ 189 (402)
T TIGR00897 111 FYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIP-AFGEMNTLWSALAFVLTGGVIA 189 (402)
T ss_pred HHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-ccchHHHHHHHHHHHHHHHHHH
Confidence 37889999998888888899999999999999999999999997 689999999998 8897777666544444444444
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+++.++++++++. +++++ +++
T Consensus 190 ~~~~~~~~~~~~~-~~~~~-------------------~~~--------------------------------------- 210 (402)
T TIGR00897 190 LFSNKDIFTPQHM-QTREK-------------------FSE--------------------------------------- 210 (402)
T ss_pred HhccCCCCCcccc-cCCcc-------------------hhh---------------------------------------
Confidence 4555554321110 00000 000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
.+.++++++|||+++...+..++.....++..+|.|.|+++ +|++..
T Consensus 211 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~ 257 (402)
T TIGR00897 211 --------------------------------LGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTS 257 (402)
T ss_pred --------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence 01235678999999998888888888999999999999876 899999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---c-cCCChhHHHHHHHHHHH
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCNTSMVAIFFTIGMA 315 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~l~~~ 315 (817)
+.+.+.....+++.++++..|+++||+++|+. ....+.....+....+. . ..++.........+.+.
T Consensus 258 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---------~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~ 328 (402)
T TIGR00897 258 EWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNT---------VRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGI 328 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchhH---------HHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Confidence 99998888999999999999999999998774 11222222222211211 1 12233333333333333
Q ss_pred HhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734 316 FMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV 395 (817)
Q Consensus 316 ~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (817)
+.+...+ ......+.+|++||+++|+.|...++|+.++|.+.|.+.|..
T Consensus 329 ~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~------------------------------ 377 (402)
T TIGR00897 329 FLAGYVP-LAAVFPTLAPKHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFF------------------------------ 377 (402)
T ss_pred HHHHHHH-HHHHHHhhCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc------------------------------
Confidence 3333333 234456788899999999999999999999999999998875
Q ss_pred ccccccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734 396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF 433 (817)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 433 (817)
++...|++.+++.+++.++..|.
T Consensus 378 ---------------g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 378 ---------------GAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred ---------------chHHHHHHHHHHHHHHHHHHHHh
Confidence 58889999988888777766554
No 90
>PRK10504 putative transporter; Provisional
Probab=99.84 E-value=1.7e-20 Score=214.12 Aligned_cols=309 Identities=13% Similarity=0.052 Sum_probs=207.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|+|.+...|...+.+.|++|+++|+++.++......+|..+||++++.+.+ ..|||+.|++..++..+..+...
T Consensus 104 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~-~~gw~~~f~~~~~~~~l~~~~~~ 182 (471)
T PRK10504 104 ARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVE-YASWHWIFLINIPVGIIGAIATL 182 (471)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999999 89999999999888877776666
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhcccc--ccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAA--ERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF 158 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (817)
...|++++++++.+.............. ...+++..+| ....+.....
T Consensus 183 ~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~ 232 (471)
T PRK10504 183 MLMPNYTMQTRRFDLSGFLLLAVGMATLTLALDGSKGLGL------------------------------SPLAIAGLVA 232 (471)
T ss_pred HhCCCccccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCc------------------------------chHHHHHHHH
Confidence 6655544333222221111000000000 0000000001 0011111111
Q ss_pred HHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734 159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV 238 (817)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 238 (817)
......+. ...++.+++++....+++|||++....+..++..........+.|.|++..+|.++
T Consensus 233 ~~~~~~~~----------------~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 296 (471)
T PRK10504 233 VGVVALLL----------------YLLHARNNNRALFSLKLFRTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSP 296 (471)
T ss_pred HHHHHHHH----------------HHHHHhcCCCCccCHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 11111111 11111111122223468999999999888888888877777889999998889999
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC-Ch-hHHHHHHHHHHHH
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC-NT-SMVAIFFTIGMAF 316 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~l~~~~ 316 (817)
.++++...+..++..++.++.|++.||+++|+. ...+..+..+....+..... ++ ........+.+.+
T Consensus 297 ~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 366 (471)
T PRK10504 297 FHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRV----------LVATTLGLALVSLLFMLVALLGWYYLLPFVLFLQGMV 366 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHH----------HHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999885 55566655555444444322 22 2222223333344
Q ss_pred hhhccccccccc-cccCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 317 MGFCYASIRVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 317 ~g~~~~~~~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.+...+...... +..++++++.++|+.++.+.+|.++|+.+.|.+.+..+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 367 NSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 444444444444 44556899999999999999999999999999998865
No 91
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.84 E-value=1.2e-19 Score=207.76 Aligned_cols=308 Identities=13% Similarity=0.153 Sum_probs=208.8
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
+.++.+.+.+++.++.+...+|...+++..|.+.+ ..++...+++++++.+.+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~ 58 (479)
T PRK10077 6 NSSYIFSITLVATLGGLLFGYDTAVISGTVESLNT---------------------------VFVAPQNLSESAANSLLG 58 (479)
T ss_pred cchHHHHHHHHHHHHHHhcCcccceehHhHHHHHH---------------------------HhcccccccccCChhHHH
Confidence 34566777888888999999999999988877665 112234446799999999
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh---------h-hcchHHHHHHHHHHhhhcc---
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI---------A-HSGPVSMTVLRFLEGVGED--- 591 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a---------~-~~s~~~l~~~R~l~Gig~~--- 591 (817)
++.+++.+++.+++++.|+++||+|||+++.++.++++++.++++++ + ...++.+++.|+++|++.|
T Consensus 59 ~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~ 138 (479)
T PRK10077 59 FCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLAS 138 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHh
Confidence 99999999999999999999999999999999999999999988874 1 1135678999999999998
Q ss_pred ----------------------------------------------------------------------------cCch
Q psy11734 592 ----------------------------------------------------------------------------LETP 595 (817)
Q Consensus 592 ----------------------------------------------------------------------------~~~~ 595 (817)
.+.+
T Consensus 139 ~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~~~~l~~s~ 218 (479)
T PRK10077 139 MLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLMLLYFVPETP 218 (479)
T ss_pred hHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHHHHcCCCCc
Confidence 0000
Q ss_pred -h------------------------------HHhhcC-----HhHHHH-----H----HHHHHHHHHHHHHHhhHHHHH
Q psy11734 596 -W------------------------------AAILSS-----LPVWSL-----I----ISEVGHDYGFYLISSDLPKYM 630 (817)
Q Consensus 596 -~------------------------------~~~l~~-----~~~~~~-----~----~~~~~~~~~~~~~~~~~p~~l 630 (817)
+ ++.+++ +..+.. . ...+......+....+.|.++
T Consensus 219 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~ 298 (479)
T PRK10077 219 RYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIF 298 (479)
T ss_pred HHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHH
Confidence 0 000000 000000 0 000111111223345567666
Q ss_pred HHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh--cCch-HHHH
Q psy11734 631 SQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV--GCNT-SMVA 707 (817)
Q Consensus 631 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~ 707 (817)
++ .|.+...........++...++.++.++++||+|||+.+ ..+..+.+++++.+... .... ....
T Consensus 299 ~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~----------i~~~~~~~v~~~~l~~~~~~~~~~~~~~ 367 (479)
T PRK10077 299 KT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQ----------IIGALGMAIGMFSLGTAFYTQAPGIVAL 367 (479)
T ss_pred HH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHH----------HHhHHHHHHHHHHHHHHHhcCcccHHHH
Confidence 65 788877777777788899999999999999999987643 45566666655554332 1111 2222
Q ss_pred HHHHHHHHHHhh-hhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhh------cCCccccHHHHHHHHHH
Q psy11734 708 ICFTIGMAFMGF-CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT------QNKTLLEWRVVFWIMFL 779 (817)
Q Consensus 708 ~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~------~~~g~~~~~~~~~~~~~ 779 (817)
....+..++.+. ..+..+...+|.+| ++|+++.|+.+..+++++.+++.+.+.+. |..+ +...|++.++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~ 444 (479)
T PRK10077 368 LSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFH---NGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhcc---CccHHHHHHH
Confidence 222222222222 23555688888888 78999999999999999999987776554 3333 5567777777
Q ss_pred HHHHHHHHHHHhcc
Q psy11734 780 TLFISNVFFVLFGS 793 (817)
Q Consensus 780 ~~~i~~~~~~~~~~ 793 (817)
..+++.+..+++.+
T Consensus 445 ~~~~~~~~~~~~~~ 458 (479)
T PRK10077 445 MGVLAALFMWKFVP 458 (479)
T ss_pred HHHHHHHHHHhccc
Confidence 76666666555533
No 92
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.84 E-value=1.6e-19 Score=206.22 Aligned_cols=300 Identities=16% Similarity=0.154 Sum_probs=206.1
Q ss_pred HHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHH
Q psy11734 452 LGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFY 531 (817)
Q Consensus 452 il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~ 531 (817)
...++.++.+...+|...++...|.+..+.+. +...+.+.+..+.+++.+++.
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~ 81 (481)
T TIGR00879 29 LSLIAAIGGLMFGYDTGVIGGALALPAFEFKF---------------------------TSANSDSYSSSLWGLVVSIFL 81 (481)
T ss_pred HHHHHHHHHHhcccccchhhhhhhcHHHHHhc---------------------------CCcccCCCChhHHHHHHHHHH
Confidence 34455556677788888899888887770000 000022245899999999999
Q ss_pred HHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc-------------------
Q psy11734 532 YGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED------------------- 591 (817)
Q Consensus 532 ~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~------------------- 591 (817)
+++.+++++.|+++||+|||+++.++.++++++.+++.+.+ ..+++.+++.|+++|+|.+
T Consensus 82 ~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 161 (481)
T TIGR00879 82 VGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALR 161 (481)
T ss_pred HHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhh
Confidence 99999999999999999999999999999999999997754 1245689999999999988
Q ss_pred -------------------------------------------------------cCchh--------------------
Q psy11734 592 -------------------------------------------------------LETPW-------------------- 596 (817)
Q Consensus 592 -------------------------------------------------------~~~~~-------------------- 596 (817)
.+.+.
T Consensus 162 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (481)
T TIGR00879 162 GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPESPRWLVGKGRVEEARKSLARLRG 241 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHcCChHHHHHHHHHHhC
Confidence 00000
Q ss_pred ------------------------------HHhhc------CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH
Q psy11734 597 ------------------------------AAILS------SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE 640 (817)
Q Consensus 597 ------------------------------~~~l~------~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 640 (817)
++.++ .+.++...+..+........+..+.|.++++ .|++..+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~ 320 (481)
T TIGR00879 242 TSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDH 320 (481)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchH
Confidence 00000 1111222222222222333445566766655 7999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH---hhcCc------hHHHHHHHH
Q psy11734 641 NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS---YVGCN------TSMVAICFT 711 (817)
Q Consensus 641 ~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~~~~~------~~~~~~~~~ 711 (817)
.+.......++.+++.++.|+++||++||+.+ ..++.+..++++++. ....+ .........
T Consensus 321 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (481)
T TIGR00879 321 AFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLL----------LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFIL 390 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchHHH----------HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHH
Confidence 88999999999999999999999999987653 344555555544444 11111 222222222
Q ss_pred HHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734 712 IGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV 789 (817)
Q Consensus 712 ~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~ 789 (817)
+...+.+ ...+.......|..| +.|+++.|+.+...+++++++|.+.+.+.++.+ |+..|++.+++++++.+..+
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~---~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 391 LFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIG---VGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---ccceehhHHHHHHHHHHHHh
Confidence 2222222 233444566688888 679999999999999999999999999998865 77888888888887777666
Q ss_pred Hhc
Q psy11734 790 LFG 792 (817)
Q Consensus 790 ~~~ 792 (817)
+..
T Consensus 468 ~~~ 470 (481)
T TIGR00879 468 FFL 470 (481)
T ss_pred eec
Confidence 543
No 93
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.84 E-value=1.2e-20 Score=211.03 Aligned_cols=285 Identities=18% Similarity=0.125 Sum_probs=202.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|+|++++++.+.+..+|..+++.+++.+.+ ..+||+.|++.+.+.++..++..
T Consensus 109 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 187 (406)
T PRK11551 109 ARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAG-DAAWRHIFYVGGVGPLLLVPLLM 187 (406)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc-ccCHHHHHHHHHHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999999999888 89999999998877676666666
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+++||+|+.++..++++ ++
T Consensus 188 ~~l~~~~~~~~~~~~~~--------------~~----------------------------------------------- 206 (406)
T PRK11551 188 RWLPESRAFAQAAGAGK--------------QR----------------------------------------------- 206 (406)
T ss_pred HhCCCChhHHhccCcch--------------hh-----------------------------------------------
Confidence 66666543211000000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHh---hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAIL---YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS 237 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s 237 (817)
+.....++ +++..+...+..++.....+....|.|.|+++ +|++
T Consensus 207 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s 253 (406)
T PRK11551 207 --------------------------------APVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLS 253 (406)
T ss_pred --------------------------------hhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCC
Confidence 00011111 12233344445555566777788899999987 6999
Q ss_pred ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734 238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (817)
+.+.+.......++..+++++.|+++||.++|+. ...+.....+++..+...+ +.........+.+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~ 322 (406)
T PRK11551 254 RSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRV----------VLLIYAGILASLAALAAAP-SFAGMLLAGFAAGLFV 322 (406)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998875 4444444444444444433 3333322223333333
Q ss_pred hhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734 318 GFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA 396 (817)
Q Consensus 318 g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (817)
....+.......+.. +++|+++.|+.+...++|+.++|.+.|.+.|+.+
T Consensus 323 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~------------------------------ 372 (406)
T PRK11551 323 VGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGR------------------------------ 372 (406)
T ss_pred HhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCC------------------------------
Confidence 333344455555654 4899999999999999999999999999988643
Q ss_pred cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734 397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
++...+++...+.+++.++.++..+
T Consensus 373 --------------~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (406)
T PRK11551 373 --------------STVGVIGASIPVILVAALAALLLVS 397 (406)
T ss_pred --------------chHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5777787777777776666555443
No 94
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.84 E-value=9.1e-19 Score=194.55 Aligned_cols=376 Identities=10% Similarity=0.024 Sum_probs=249.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
+|+++...+..++...+-.......|.+.++ ++.++.+.+++.....++..+..++.|+++||++||++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~v---------- 70 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRV---------- 70 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchh----------
Confidence 4667777777777776665565656666544 68888899999999999999999999999999999996
Q ss_pred HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734 282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF 360 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~ 360 (817)
+..+..+.+++.+.+.... +. .....+.+.+.+...+...+...|..| |+|++++|+.+...+++..+||.++|.
T Consensus 71 l~~~~~~~~~~~~~~~~~~-~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 71 MFIANGIKLLGCLLMLFGI-HP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred hHHHHHHHHHHHHHHHHHH-HH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665555444433322 22 223334455666667777777777666 799999999999999999999999998
Q ss_pred ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
+.+. .|+..+.+.+++.+++.+....+++++++
T Consensus 147 l~~~----------------------------------------------~~~~~~~i~~~~~~~~~~~~~~l~~~~~~- 179 (393)
T PRK11195 147 LADP----------------------------------------------HAEAALAVCALIYLLAALFNLFIPRLGAR- 179 (393)
T ss_pred HHHH----------------------------------------------HHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence 7764 25666666655554444443333322111
Q ss_pred ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCCh
Q psy11734 441 WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDE 520 (817)
Q Consensus 441 ~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 520 (817)
+++ . +.+ +
T Consensus 180 -~~~-~--------------------------------------------------------------------~~~--~ 187 (393)
T PRK11195 180 -RPG-Q--------------------------------------------------------------------SWN--P 187 (393)
T ss_pred -ccc-c--------------------------------------------------------------------CCC--H
Confidence 000 0 000 0
Q ss_pred hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhh
Q psy11734 521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAIL 600 (817)
Q Consensus 521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l 600 (817)
. +. ...+. +++++++
T Consensus 188 ~------------------------------~~-------------~~~~~----------------------~~~~~l~ 202 (393)
T PRK11195 188 I------------------------------AL-------------LRDFF----------------------HACRVLW 202 (393)
T ss_pred H------------------------------HH-------------HHHHH----------------------HHHHHHH
Confidence 0 00 00000 1134556
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~ 680 (817)
++|.+........+............|.|+++.+|.++.+.+...+...++.+++.+..+++.||.++++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~~-------- 274 (393)
T PRK11195 203 RDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVLRVL-------- 274 (393)
T ss_pred hCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchH--------
Confidence 667665555554455555666667788899988999999999999999999999999999999988876543
Q ss_pred HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCc--hHHHHHHHHHHHHHHHhHHHHHH
Q psy11734 681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNF--SGTIMALSNGLGCVSGMVAPLTV 758 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~g~~~~~~~~g~~i~p~~~ 758 (817)
..+.. .++..+.+...+ +.+......++.+++.+...++..+..++..|++ +|++.++.|..++++..++..+.
T Consensus 275 --~~g~~-~~~~~~~~~~~~-~~~~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~ 350 (393)
T PRK11195 275 --PAGIL-MGLVVLLMALQH-SLLPAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLY 350 (393)
T ss_pred --HHHHH-HHHHHHHHHHHh-HHHHHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHH
Confidence 23332 223333333332 4444444555556666665666666677777653 69999999999999999999999
Q ss_pred HHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 759 GFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 759 g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
+.+ +..+ -+..+...++..+++....+.++
T Consensus 351 ~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 380 (393)
T PRK11195 351 SLL-VKLG---VPVVAVIVGFGLLVALAMALLWR 380 (393)
T ss_pred HHH-HHcC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 865 5544 45566666665556665555553
No 95
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.84 E-value=1.7e-20 Score=207.33 Aligned_cols=278 Identities=15% Similarity=0.126 Sum_probs=206.2
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchh--HHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFM--TALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~--~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
|+++|.+.+...|...+++.|+.|+++|.++ .+......++|.++||++++++.+ ..|||+.|++.+++.++..++.
T Consensus 94 ~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~-~~~~~~~f~~~~~~~~~~~~~~ 172 (375)
T TIGR00899 94 GVLLSSFASTANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLAL-GFGFTVMFLTAALAFVLCGVLV 172 (375)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHH-hcccHHHHHHHHHHHHHHHHHH
Confidence 6778888888889999999999988877755 688888899999999999999999 8999999999998888777777
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
++++||+|+.++. ++.
T Consensus 173 ~~~~~~~~~~~~~---~~~------------------------------------------------------------- 188 (375)
T TIGR00899 173 WLFLPSYPRGAPG---ALT------------------------------------------------------------- 188 (375)
T ss_pred HHhCCCcccCccc---ccC-------------------------------------------------------------
Confidence 7767765432110 000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
+.+.++.+++|+++......++..........+.|.|+++.+|.++.
T Consensus 189 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 235 (375)
T TIGR00899 189 ---------------------------------RLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDK 235 (375)
T ss_pred ---------------------------------cchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHH
Confidence 00123356667666665555555555566677889999888999999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
+.+.+.........++.++.|++.||+++|+. ...+..+..+........+ +.+.......+.+.+.+.
T Consensus 236 ~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~g~ 304 (375)
T TIGR00899 236 LAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRL----------MLLAALAGVAFYTGLAADN-SLWALLMLQLLNAIFIGI 304 (375)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHhcchhH----------HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 99988877777888899999999999998875 4444444444433333322 333333344444444555
Q ss_pred ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
..+......+|..|+++++++++.+...++|.+++|.+.|.+.|..
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~---------------------------------- 350 (375)
T TIGR00899 305 LAGIGMLYFQDLMPGRAGAATTLYTNTGRVGWIIAGSVGGILAERW---------------------------------- 350 (375)
T ss_pred HHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhc----------------------------------
Confidence 5555566777888888899999999999999999999999888764
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF 433 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 433 (817)
+|+..|++.+++.+++.++..+.
T Consensus 351 -----------g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 351 -----------SYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred -----------cchhHHHHHHHHHHHHHHHHhee
Confidence 58889999998888888776654
No 96
>TIGR00895 2A0115 benzoate transport.
Probab=99.84 E-value=1.4e-19 Score=201.50 Aligned_cols=377 Identities=16% Similarity=0.138 Sum_probs=237.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL 284 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~ 284 (817)
+....+..+...........+.|.+.++ +|.+..+.+++.....++..++.++.|+++||+|||+. ...
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~----------~~~ 87 (398)
T TIGR00895 19 IILSFLIMLMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRV----------LLW 87 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHH----------HHH
Confidence 3344444455555555666667766655 79999999999999999999999999999999999885 566
Q ss_pred HhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecc
Q psy11734 285 GAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 363 (817)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~ 363 (817)
+..+..++.......+ +.....+...+.+.+.+...+.......|..| ++|+++.++.+....+|..+++.+.+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~ 166 (398)
T TIGR00895 88 SILLFSVFTLLCALAT-NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP 166 (398)
T ss_pred HHHHHHHHHHHHHHcc-chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh
Confidence 6666666655555543 44445555555555566666666777777766 789999999999999999999999888776
Q ss_pred cccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccC
Q psy11734 364 NIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNE 443 (817)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~ 443 (817)
+. +|+..|++.+++..+..++...+.++.++...+
T Consensus 167 ~~---------------------------------------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (398)
T TIGR00895 167 VF---------------------------------------------GWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVS 201 (398)
T ss_pred cc---------------------------------------------cceeehhhhhhHHHHHHHHHHHhCCCCChHHHh
Confidence 54 578888887655554444333333332211111
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ 523 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (817)
+..+..... ....+. ...+ +. ++ ..+++ .++- +.
T Consensus 202 ~~~~~~~~~---------~~~~~~--------~~~~--------~~--------~~----~~~~~----~~~~---~~-- 235 (398)
T TIGR00895 202 KRPETVRRI---------VNAIAP--------QMQA--------EA--------QS----ALPEQ----KATQ---GT-- 235 (398)
T ss_pred cCHHHHHHH---------HHHHHH--------hccc--------cc--------cc----ccccc----cccc---ch--
Confidence 100000000 000000 0000 00 00 00000 0000 00
Q ss_pred HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCH
Q psy11734 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSL 603 (817)
Q Consensus 524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~ 603 (817)
.|.. . ...++..+.+
T Consensus 236 --------------------------~~~~------------------~---------------------~~~~~~~~~~ 250 (398)
T TIGR00895 236 --------------------------KRSV------------------F---------------------KALFQGKTAR 250 (398)
T ss_pred --------------------------hhHH------------------H---------------------HHHhcchhHH
Confidence 0000 0 0001111223
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734 604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT 683 (817)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 683 (817)
..+......++.....+....|.| ++.+..|.++.+.+.......++.+++.++.|+++||+++|.. .
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-----------~ 318 (398)
T TIGR00895 251 ITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVT-----------A 318 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHH-----------H
Confidence 444455555666677777888899 5555589999999999999999999999999999999997632 1
Q ss_pred HHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHh
Q psy11734 684 LGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 761 (817)
Q Consensus 684 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~ 761 (817)
....+..+...++.....+.+......++.+++.+...+...+...|..| ++|+++.|+.+.+..+|+.++|.+.|.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 319 LLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 22222222222222222245555555566666667777777888888888 7899999999999999999999999875
No 97
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.84 E-value=3e-19 Score=196.00 Aligned_cols=331 Identities=18% Similarity=0.105 Sum_probs=227.1
Q ss_pred HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734 222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC 301 (817)
Q Consensus 222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (817)
....+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|+|+. +..+..+..++.... .. +
T Consensus 19 ~~~~lp~l~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~----------~~~~~~~~~~~~~~~-~~-~ 85 (355)
T TIGR00896 19 VGPLLPQIRSA-LGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERS----------VAAGLLLIAAGILIR-SA-P 85 (355)
T ss_pred CcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHH----------HHHHHHHHHHHHHHH-Hh-c
Confidence 34556665554 89999999999999999999999999999999999986 555655555554444 32 3
Q ss_pred ChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccch
Q psy11734 302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTI 381 (817)
Q Consensus 302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~ 381 (817)
+.........+.+.+.+...+.......+..|++|+++.+..+....+|..+++.+.+.+.+..+
T Consensus 86 ~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~--------------- 150 (355)
T TIGR00896 86 GTALLFAGTALIGVGIAIINVLLPSLIKRDFPQRVGLMTGLYSMALMGGAALAAAATVPLAQHSG--------------- 150 (355)
T ss_pred cHHHHHHHHHHHHHHHHHHhccchHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---------------
Confidence 44444444444444444444445556677778899999999999999999999998887765431
Q ss_pred hhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHH
Q psy11734 382 MALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVT 461 (817)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~ 461 (817)
.+|+..|.+.+++.++..... ..+.++++ ++
T Consensus 151 ----------------------------~~w~~~f~~~~~~~~~~~~~~--~~~~~~~~--~~----------------- 181 (355)
T TIGR00896 151 ----------------------------GHWQQALAWWALPALLALLAW--IPQVRRRV--AA----------------- 181 (355)
T ss_pred ----------------------------hhHHHHHHHHHHHHHHHHHHH--hhhhcccc--CC-----------------
Confidence 148988887766554433222 11111000 00
Q ss_pred HHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhc
Q psy11734 462 LALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPG 541 (817)
Q Consensus 462 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~ 541 (817)
+ +- +.
T Consensus 182 -----------------~-----------------------------------~~--~~--------------------- 186 (355)
T TIGR00896 182 -----------------N-----------------------------------QT--TT--------------------- 186 (355)
T ss_pred -----------------C-----------------------------------CC--CC---------------------
Confidence 0 00 00
Q ss_pred hhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHH
Q psy11734 542 GILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYL 621 (817)
Q Consensus 542 G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 621 (817)
+ . +.++++|+|..|...+..++....++.
T Consensus 187 -----~------------------------~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (355)
T TIGR00896 187 -----R------------------------L----------------------TPVRIWRSPLAWQVTVFFGLQSGLYYS 215 (355)
T ss_pred -----C------------------------C----------------------CCchhhcCHhHHHHHHHHHHHHHHHHH
Confidence 0 0 124567788888877777777888888
Q ss_pred HHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q psy11734 622 ISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC 701 (817)
Q Consensus 622 ~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
...|+|.|+++ .|.|..+.+...+...++.++++++.|++.||+++|+. ....+..+..++.+.+.+...
T Consensus 216 ~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~---------~~~~~~~~~~~~~~~~~~~~~ 285 (355)
T TIGR00896 216 LIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQRG---------IVAVLAVLQLVGLCGLLFAPM 285 (355)
T ss_pred HHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---------HHHHHHHHHHHHHHHHHHhhh
Confidence 99999999987 69999999999999999999999999999999964432 223455555555554544332
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhccc-cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc
Q psy11734 702 NTSMVAICFTIGMAFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL 767 (817)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~ 767 (817)
+. ... ...+.+++.+..++.......+ ..+ +++++..++.+..+++++.++|.+.|.+.|+.+.
T Consensus 286 ~~-~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~ 351 (355)
T TIGR00896 286 HG-LWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGN 351 (355)
T ss_pred hH-HHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 22 111 2334455555555555444433 333 6689999999999999999999999999998853
No 98
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.83 E-value=5.2e-20 Score=205.97 Aligned_cols=261 Identities=15% Similarity=0.028 Sum_probs=196.7
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+...+.+.|++|+++|.++.++......+|..++|.+++.+.+ ..|||++|++.+++.++..+..+
T Consensus 107 ~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~~w~~~~~~~~~~~~~~~~~~~ 185 (406)
T PRK15402 107 LRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIH-VLPWRGMFVLFAALAALSFFGLW 185 (406)
T ss_pred HHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccCccHHHHHHHHHHHHHHHHHH
Confidence 38899999998889999999999999999999999999999999999999999999 89999999998888777766665
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||++++++ +++. ++
T Consensus 186 ~~~~~~~~~~~---~~~~-------------------~~----------------------------------------- 202 (406)
T PRK15402 186 RAMPETAGRVG---EKLS-------------------LK----------------------------------------- 202 (406)
T ss_pred HhCCCCCcccc---cccc-------------------HH-----------------------------------------
Confidence 55555432110 0000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+...++++++|||.++...+..++.....+....+.|.|+++.+|+++.+
T Consensus 203 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~ 252 (406)
T PRK15402 203 ------------------------------ELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE 252 (406)
T ss_pred ------------------------------HHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH
Confidence 00223567899999998888877777777777788899998889999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc----CCChhHHHHHHHHHHHH
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV----GCNTSMVAIFFTIGMAF 316 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~ 316 (817)
.+....+..++..++.++.|+++||.++|+. ...+.....++...+... ..+..+......+.+.+
T Consensus 253 ~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~----------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 253 YGLLQVPVFGALIAGNLTLARLTSRRPLRSL----------IRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 9988888888999999999999999998875 555555554444443322 22333344444444445
Q ss_pred hhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 317 MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 317 ~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+...+..........|+++|++.++.+..+.++..+|+.+.+.+.+..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~ 371 (406)
T PRK15402 323 IGLANAGLYRLTLFSSDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGG 371 (406)
T ss_pred HHHHhhhHHHHHhhhccccccHHHHHHHHHHHHHHHHHHHHHHhcccCC
Confidence 5444444444444556689999999999999999999999999887765
No 99
>KOG1330|consensus
Probab=99.83 E-value=2.6e-20 Score=196.63 Aligned_cols=284 Identities=14% Similarity=0.151 Sum_probs=212.7
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
..+..+..+.++++...++++||+.+....+++.. .+|+++++.|
T Consensus 27 ~~~~~~~~l~il~~vnlmny~Dr~~iagv~~~v~~-----------------------------------~fni~~s~~G 71 (493)
T KOG1330|consen 27 SMKSPTLTLVILCLVNLMNYADRYTIAGVLKEVQT-----------------------------------YFNISDSELG 71 (493)
T ss_pred ccccchHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-----------------------------------hcCCCchhcc
Confidence 45566788999999999999999999887776666 9999999999
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-------------
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------- 591 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------- 591 (817)
++.+.|.+.+.+.+|++|+++|||+||+++.+|..+|++++++++++. .||+++++|.+.|+|++
T Consensus 72 ll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~--~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~ 149 (493)
T KOG1330|consen 72 LLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSN--HFWQVLLCRGFVGIGEASYSPIAPSLIADS 149 (493)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHH--HHHHHHHHHHHhccchhhhcccchhHhhhc
Confidence 999999999999999999999999999999999999999999999998 99999999999999999
Q ss_pred --------------------------------------------------------------------------c-----
Q psy11734 592 --------------------------------------------------------------------------L----- 592 (817)
Q Consensus 592 --------------------------------------------------------------------------~----- 592 (817)
.
T Consensus 150 f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~~~~~ 229 (493)
T KOG1330|consen 150 FPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENKMVKP 229 (493)
T ss_pred CcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCcCCCC
Confidence 0
Q ss_pred ----CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH---HhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy11734 593 ----ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ---VIGLSVAENGVLSALPFLIMWLVSMSSSALADY 665 (817)
Q Consensus 593 ----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~---~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr 665 (817)
.++.+...|+|.+....+.+....+..-++..|.|.++.. ..|.+..+..++..+...++.+|..++|.++||
T Consensus 230 ~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggiisd~ 309 (493)
T KOG1330|consen 230 FTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGIISDK 309 (493)
T ss_pred ccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHHHHHH
Confidence 0112334556777777888888888888888888888764 346677778888889999999999999999999
Q ss_pred hhccccc-ccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHH-HHHHHHHHHhhhhhhhhhhccccC-CCchHHHHHH
Q psy11734 666 LIVRDIL-SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAI-CFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMAL 742 (817)
Q Consensus 666 ~g~~~~~-~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~ 742 (817)
+-++..- ....+-......+...++..+.+............. ++.++........+...-+..++. |+.|.++.++
T Consensus 310 ~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~ 389 (493)
T KOG1330|consen 310 LSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYAL 389 (493)
T ss_pred HHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHH
Confidence 7653211 001122334444444444444444443322233333 333333332233333333344444 5899999999
Q ss_pred HHHHHHH-HHhHHHHHHHHhhcCC
Q psy11734 743 SNGLGCV-SGMVAPLTVGFLTQNK 765 (817)
Q Consensus 743 ~~~~~~~-g~~i~p~~~g~~~~~~ 765 (817)
...+..+ |.+-+|++.|.+.|+.
T Consensus 390 ~~~~~h~fgd~~~p~ivGilsd~l 413 (493)
T KOG1330|consen 390 DTVFEHIFGDAASPYIVGILSDKL 413 (493)
T ss_pred HHHHHHHhccCCCcceehhHHHHh
Confidence 9888776 6677777999999976
No 100
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.83 E-value=3.1e-20 Score=205.05 Aligned_cols=260 Identities=14% Similarity=0.101 Sum_probs=193.1
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|.++|++.+..++.....+.+++| |||+++.++...+.++|..+++++.+.+.+ ..|||+.|++.+++.++..+..+
T Consensus 97 ~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~~~ 174 (377)
T TIGR00890 97 TYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVIN-LEGVPAAFIYMGIIFLLVIVLGA 174 (377)
T ss_pred HHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHH
Confidence 3788999999989999999999996 689999999999999999988888888888 88999999999988888877777
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+++|++|++++..++ + . +
T Consensus 175 ~~~~~~~~~~~~~~~-~---------~----~------------------------------------------------ 192 (377)
T TIGR00890 175 FLIGYPPGQLIKTNI-E---------V----S------------------------------------------------ 192 (377)
T ss_pred HheecCchhccccCc-c---------c----c------------------------------------------------
Confidence 776654322110000 0 0 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+++.+.++++|||+++...+..++..........+.+.|.++ +|.+..+
T Consensus 193 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (377)
T TIGR00890 193 ------------------------------VKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGF 241 (377)
T ss_pred ------------------------------hhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 001135678889998888777777766666666777777765 6888888
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCCh-hHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT-SMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~~g~ 319 (817)
.+.+.....++..+++++.|+++||++||+. ...+..+..++...+...++.. ........+.+...+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 311 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQKT----------MSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGG 311 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh----------hhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999885 5566666666655554443222 1222223333344444
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..+.......|..| ++|+++.|+.+....+|++++|.+.|.+.|+.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~ 358 (377)
T TIGR00890 312 TISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEI 358 (377)
T ss_pred chhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 44444555666555 78999999999999999999999999888764
No 101
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.82 E-value=4.5e-20 Score=203.92 Aligned_cols=283 Identities=17% Similarity=0.130 Sum_probs=196.3
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHh-hhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLAT-FCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~-~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|+++|++.+...|...+++.|++|+|||+++.++......+|..+++ .+++.+.+ ..+||+.|++.+.+.++..++.
T Consensus 89 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 167 (379)
T TIGR00881 89 LWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAE-LYSWHWVFIVPGIIAIIVSLIC 167 (379)
T ss_pred HHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHh-cCCchhHHHHHHHHHHHHHHHH
Confidence 378999999999999999999999999999999999999999999999 47777777 8899999999988888877777
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+++.||+|++++..+.++... ++.+..+..+++ +
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~------------------------------------------ 201 (379)
T TIGR00881 168 FLLLRDSPQSCGLPPAEEMPN--EEPDGDAEKKEE--E------------------------------------------ 201 (379)
T ss_pred heeeCCCccccccCccccCcc--cccccccccccc--c------------------------------------------
Confidence 777777665432211111000 000000000000 0
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
.++.+...++++|+|.++...+..++.....+.+..+.|.|+++.+|+++.
T Consensus 202 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 202 -----------------------------LTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred -----------------------------ccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 001122356788999999999999988888899999999999998899999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMG 318 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g 318 (817)
+++....+..+++.+++++.|++.||..+|+. .............++....... .+.........+.+....
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 325 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRR-------GPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVY 325 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcc-------hHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999754442 1111112222222222222211 122222222222222222
Q ss_pred hccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 319 FCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 319 ~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
...+.......|.. +++|+++.|+.+....+|+.++|.+.|.+.|+.|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g 374 (379)
T TIGR00881 326 GPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFG 374 (379)
T ss_pred hhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhc
Confidence 22222344455544 5899999999999999999999999999999764
No 102
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.82 E-value=1.5e-17 Score=188.98 Aligned_cols=434 Identities=12% Similarity=0.068 Sum_probs=263.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHH
Q psy11734 203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVF 281 (817)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~ 281 (817)
+.++.++...++...++|++..+++.|+++.+|.+..+++++.........+..+++|+++|| +|||+.
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~---------- 83 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRT---------- 83 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHH----------
Confidence 457788888889999999999999999999999999999988888888888888999999999 999996
Q ss_pred HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhccccccccc
Q psy11734 282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPLTV 358 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg~~~~~~i~ 358 (817)
...+.++..++.+.+....+..........+.+.+.+...+.......|..| + +|+.++++.+...++|.++||.+.
T Consensus 84 ~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 84 IVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred HHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 7788877777776666554323333344555556666677777777777665 4 457899999999999999999999
Q ss_pred ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
|.+.++. +|++.|++.++..+++.+.+.+.++.-+
T Consensus 164 g~l~~~~---------------------------------------------gw~~~F~i~~i~~~~~~~~~~~~~~~~~ 198 (489)
T PRK10207 164 PVIADKF---------------------------------------------GYSVTYNLCGAGLIIALLVYFACRGMVK 198 (489)
T ss_pred HHHHHhh---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHcchhhc
Confidence 9987764 6999999976655555555544432211
Q ss_pred ccccCC-CCchhH--HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734 439 QYWNES-ILPARY--VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK 515 (817)
Q Consensus 439 ~~~~~~-~~~~~~--~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (817)
+..++. ..+.++ .++....+......
T Consensus 199 ~~~~~~~~~~~d~~~~~l~~~~~~~~~~~--------------------------------------------------- 227 (489)
T PRK10207 199 DIGSEPDHKPMSFSKLLLVLLGSVVMIFV--------------------------------------------------- 227 (489)
T ss_pred ccCCCCCccchhhhhHHHHHHHHHHHHHH---------------------------------------------------
Confidence 111011 001110 00100000000000
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP 595 (817)
Q Consensus 516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~ 595 (817)
.....|+ + +..... +...++... ..+.. ...+
T Consensus 228 -------------------------~~~~~~~-~-~~~~~~-~~~~~~i~~-~~f~~-------------------~~~~ 259 (489)
T PRK10207 228 -------------------------CAWLMHN-V-EVANLV-LIVLSIVVT-IIFFR-------------------EAFK 259 (489)
T ss_pred -------------------------HHHHHhh-h-hHHHHH-HHHHHHHHH-HHHHH-------------------HHhc
Confidence 0001111 0 000000 000000000 00100 0001
Q ss_pred hHHhhcCHhHHHHHH--HHHHHHHHHHHHHhhHHHHHHHHhCCCh----hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 596 WAAILSSLPVWSLII--SEVGHDYGFYLISSDLPKYMSQVIGLSV----AENGVLSALPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 596 ~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~l~~~~g~s~----~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
..+..|+|.+....+ ...+....+....+.+|.|.++..+.+. .....+..+..+..++..++.+++.||+++|
T Consensus 260 ~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r 339 (489)
T PRK10207 260 LDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSK 339 (489)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhC
Confidence 124556665443332 2344444455555778888875333221 1234444556677778888899999999988
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHH-----Hhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHH
Q psy11734 670 DILSRTNVRKVFATLGAVLPGVGALAA-----SYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTI 739 (817)
Q Consensus 670 ~~~~~~~~r~~~~~~~~~~~~~~~~~~-----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~ 739 (817)
+.-. ....| ...++++.+++++.+ ... ..+.++.+...++.+.+..+..++....+.+..| +.+|.+
T Consensus 340 ~~~~-~~~~k--~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~ 416 (489)
T PRK10207 340 GKDL-SMPMK--FTLGMFLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFI 416 (489)
T ss_pred CCCC-CcHHH--HHHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHH
Confidence 5200 01111 134555555454322 111 1234666667777777777777777777777777 789999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHhhcCC-------ccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 740 MALSNGLGCVSGMVAPLTVGFLTQNK-------TLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 740 ~g~~~~~~~~g~~i~p~~~g~~~~~~-------g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+|+.+...++|+.++..+........ .+..+...|...+...+++.++++...+
T Consensus 417 ~g~~~l~~~ig~~lg~~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 417 LGMWFLTQAAAFLLGGYVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999988876553210 1123667788888777777666665543
No 103
>PRK03699 putative transporter; Provisional
Probab=99.82 E-value=3.9e-18 Score=189.90 Aligned_cols=346 Identities=11% Similarity=0.060 Sum_probs=224.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734 203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA 282 (817)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~ 282 (817)
+-++..+...++.......+...+|.+.++ +|.|..+.++......++..++++++|++.||+|||+. +
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~~-~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~----------~ 75 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAEY-FNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQ----------L 75 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH----------H
Confidence 345666777777777777777888887665 89999999999999999999999999999999999985 6
Q ss_pred HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734 283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
..+..+..++.....+.+ +.....+...+.+.+.+...+.......+..| ++|+.+.+..+....+|+.++|.+.+.+
T Consensus 76 ~~~~~~~~i~~~l~~~~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l 154 (394)
T PRK03699 76 IFGFALMILAVAGLMFSH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYL 154 (394)
T ss_pred HHHHHHHHHHHHHHHHcc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666665543 44444445555555555555555566666666 6899999999888888888888887766
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY- 440 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~- 440 (817)
.+.. .+|++.|.+.+++.++..++..+...++.++
T Consensus 155 ~~~~--------------------------------------------~gw~~~f~~~~~~~~~~~~~~~~~~~p~~~~~ 190 (394)
T PRK03699 155 LARS--------------------------------------------IEWYWVYACIGLVYVAIFILTLFSEFPALGKH 190 (394)
T ss_pred Hhcc--------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 5432 1699999988877766555444322111111
Q ss_pred -c--cC--CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734 441 -W--NE--SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK 515 (817)
Q Consensus 441 -~--~~--~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (817)
. ++ .+.+.+. .+..+++..+........+....|...+ ++
T Consensus 191 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~----------------------------------~~ 235 (394)
T PRK03699 191 APKADKPVAKEKWGI-GVLFLAIAALLYILAQLTFISWVPEYAQ----------------------------------KK 235 (394)
T ss_pred CccccCccccccCCh-HHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------------HH
Confidence 0 00 0111111 1222223333322333333333444332 27
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCch
Q psy11734 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETP 595 (817)
Q Consensus 516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~ 595 (817)
+|+|+.+.+++.+.+.++..++.+..|+++||++||+++.....+..+...+....+ +.+.+.+.-++.|++
T Consensus 236 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~G~~------ 307 (394)
T PRK03699 236 FGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTD--DPSHLLYAILGLGFF------ 307 (394)
T ss_pred cCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcC--CchHHHHHHHHHHHH------
Confidence 899999999999999999999999999999999999998887776666555554444 333222222222211
Q ss_pred hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734 596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI-GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD 670 (817)
Q Consensus 596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 670 (817)
....+.. ...+..+.. +-+....+.......+++.++..+.|++.|+.|-+.
T Consensus 308 --------------------~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~ 360 (394)
T PRK03699 308 --------------------SSAIYTT---IITLGSQQTKVASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQA 360 (394)
T ss_pred --------------------HHHHHHH---HHHHHHHHccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchh
Confidence 1111111 111122211 123344566777777899999999999999988654
No 104
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.82 E-value=1.5e-18 Score=196.19 Aligned_cols=358 Identities=13% Similarity=0.108 Sum_probs=238.0
Q ss_pred HHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734 214 GHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA 293 (817)
Q Consensus 214 ~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 293 (817)
........+..|++.|+++.+|.|+.++|.+.+...+...+..++.|+++||.++|. +.||.++..+....+++.
T Consensus 10 ~~~~~~~~~~~~l~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~-----Grrr~~i~~~~~~~~i~~ 84 (437)
T TIGR00792 10 GNNFIFAIVSTYLLFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRW-----GKFRPWLLIGAIPFSIVL 84 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCC-----CCcchhHHHhHHHHHHHH
Confidence 344555666778999999999999999999999999999999999999999854332 112334666766666666
Q ss_pred HhhhccCCC-----hhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 294 LAASYVGCN-----TSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 294 ~~~~~~~~~-----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
+.+...++. ..+......+...+.........+...+.. +++|++..+..+....+|+.+++.+.+.+....+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~ 164 (437)
T TIGR00792 85 VLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFG 164 (437)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 655544321 112222222233333333334445555543 4789999999999999888887777666554322
Q ss_pred ccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCC
Q psy11734 367 SINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESIL 446 (817)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 446 (817)
. +....+|+..+.+.+++.++..++..+..||++++.+++
T Consensus 165 ~--------------------------------------~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~~~~-- 204 (437)
T TIGR00792 165 G--------------------------------------GDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEIPKN-- 204 (437)
T ss_pred C--------------------------------------CcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCCCcc--
Confidence 0 001237999999888887776665544443322100000
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
.+ ++. +.
T Consensus 205 -------------------------------~~----------------------------------~~~--~~------ 211 (437)
T TIGR00792 205 -------------------------------IE----------------------------------KKL--SL------ 211 (437)
T ss_pred -------------------------------cc----------------------------------cCC--CH------
Confidence 00 000 00
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHH
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVW 606 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~ 606 (817)
.+.+++++++|+++
T Consensus 212 ------------------------------------------------------------------~~~~~~l~~~~~~~ 225 (437)
T TIGR00792 212 ------------------------------------------------------------------KQIFKALFKNDQLL 225 (437)
T ss_pred ------------------------------------------------------------------HHHHHHHhCCHHHH
Confidence 01246678899998
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734 607 SLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA 686 (817)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 686 (817)
......++.....+....+.+.|.++..+ +..+.+.+.....++.+++.++.++++||+|+|+.+ ..+.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~----------~~~~ 294 (437)
T TIGR00792 226 ILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILF----------AGGI 294 (437)
T ss_pred HHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH----------HHHH
Confidence 88888888888877777777777766656 556677777778899999999999999999987653 3555
Q ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccC--------CCchHHHHHHHHHHHHHHHhHHHHHH
Q psy11734 687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLS--------PNFSGTIMALSNGLGCVSGMVAPLTV 758 (817)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~g~~~g~~~~~~~~g~~i~p~~~ 758 (817)
.+..++.+.+.+...+.+.......+.+++.+...+..++...|.. ++.+|++.|+.+....+++.+++.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~ 374 (437)
T TIGR00792 295 LLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555555443323344444555555666666666666666543 35689999999999999999999999
Q ss_pred HHhhcCCc
Q psy11734 759 GFLTQNKT 766 (817)
Q Consensus 759 g~~~~~~g 766 (817)
|.+.|..|
T Consensus 375 g~ll~~~G 382 (437)
T TIGR00792 375 GLILGIIG 382 (437)
T ss_pred HHHHHHcC
Confidence 99988654
No 105
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.82 E-value=9.6e-20 Score=202.47 Aligned_cols=254 Identities=13% Similarity=0.067 Sum_probs=186.7
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.|...|...+++.|++|+|||+++.++...+.++|..++|++++.+.+ ..|||++|++.+++.+++.+...
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~l~~~~~l~~~ 192 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGE-LIGWRNVFNAAAVMGVLCIFWII 192 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcCHHHHHHHHHHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999999 89999999998877766554444
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
...||+|+++ +.
T Consensus 193 ~~~p~~~~~~------~~-------------------------------------------------------------- 204 (394)
T PRK10213 193 KSLPSLPGEP------SH-------------------------------------------------------------- 204 (394)
T ss_pred HHCCCCCccc------cc--------------------------------------------------------------
Confidence 4344322100 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
...+.++++|+|.++...+..++.....++...+.+.++.+.+|+++.+
T Consensus 205 -------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~g~s~~~ 253 (394)
T PRK10213 205 -------------------------------QKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYMNLAGFGVDG 253 (394)
T ss_pred -------------------------------chhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhH
Confidence 0112456789999988877777777777777777755455557999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.+......+++..+++++.+++.||.+++.. ...........+..... .++.+.......+.+.+.+..
T Consensus 254 ~g~~~~~~~~~~iig~~~~~~l~~r~~~~~l----------~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~l~G~~~~~~ 322 (394)
T PRK10213 254 LTLVLLSFGIASFVGTSLSSFILKRSVKLAL----------AGAPLVLAVSALVLTLW-GSDKIVATGVAIIWGLTFALV 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhHH----------HHHHHHHHHHHHHHHHH-hhhHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999543321 22222222222222222 224444444444455555555
Q ss_pred cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+......++..|++++.+.+......++|..+||.+.|.+.|..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~G~~l~G~l~~~~ 367 (394)
T PRK10213 323 PVGWSTWITRSLADQAEKAGSIQVAVIQLANTCGAAIGGYALDNI 367 (394)
T ss_pred hHHHHHHHHHHCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 665565666656777788888888889999999999999998875
No 106
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.82 E-value=9.3e-19 Score=201.13 Aligned_cols=306 Identities=16% Similarity=0.138 Sum_probs=209.9
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
.+..++++.+..++.++.+...+|...++...|.+.++ ...++.+.++.+
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~g~d~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~ 57 (502)
T TIGR00887 8 APFGWQHFRAIVIAGVGFFTDSYDLFCISLVTKMLGYV------------------------------YYHGKGPLPSSV 57 (502)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------------hccCcccchHHH
Confidence 34567888889999999999999999999988776540 000123456778
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc------hHHHHHHHHHHhhhcc-----
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG------PVSMTVLRFLEGVGED----- 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s------~~~l~~~R~l~Gig~~----- 591 (817)
.+++.+.+.+++.+++++.|+++||+|||+++.++++++.++++++++++ + ++.++++|+++|++.+
T Consensus 58 ~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~--~~~~~~~~~~~~~~r~l~G~~~g~~~~~ 135 (502)
T TIGR00887 58 SAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSP--GSSPKSVMATLCFWRFWLGVGIGGDYPL 135 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcc--CcccchHHHHHHHHHHHHHHHHhhhhHH
Confidence 89999999999999999999999999999999999999999999999987 5 7889999999999999
Q ss_pred -------------------------------------------cC--------------------chhH-----------
Q psy11734 592 -------------------------------------------LE--------------------TPWA----------- 597 (817)
Q Consensus 592 -------------------------------------------~~--------------------~~~~----------- 597 (817)
.. ..|+
T Consensus 136 ~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~ 215 (502)
T TIGR00887 136 SAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPAL 215 (502)
T ss_pred HHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHH
Confidence 00 0111
Q ss_pred ------------------------------------------------------------HhhcC---HhH----HHHHH
Q psy11734 598 ------------------------------------------------------------AILSS---LPV----WSLII 610 (817)
Q Consensus 598 ------------------------------------------------------------~~l~~---~~~----~~~~~ 610 (817)
+++++ ++. +....
T Consensus 216 i~~~~~~~lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 295 (502)
T TIGR00887 216 LALYFRLTIPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKHLLGTAG 295 (502)
T ss_pred HHHHHHHhCCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHHHHHHHH
Confidence 01110 011 11112
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHH------------HHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGV------------LSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~------------~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
..++....+|+...|.|+++++ .|++..+.+. ......++.+++.++.++++||+|||+.+
T Consensus 296 ~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l------ 368 (502)
T TIGR00887 296 SWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ------ 368 (502)
T ss_pred HHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH------
Confidence 2334445667777889999976 6876542211 23344456777899999999999998653
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--chHHHHHHHHHHHHH-HhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHH
Q psy11734 679 KVFATLGAVLPGVGALAASYVGC--NTSMVAICFTIGMAF-MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA 754 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~ 754 (817)
+.+..+.++++.++..... +.........+..++ .....+..+....|.+| +.|+++.|+.+.++.++++++
T Consensus 369 ----~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~ 444 (502)
T TIGR00887 369 ----LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIG 444 (502)
T ss_pred ----HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHH
Confidence 3455554544444433210 111111222222222 22234556677889999 779999999999999999999
Q ss_pred HHHHHHhhcCCc-------cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 755 PLTVGFLTQNKT-------LLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 755 p~~~g~~~~~~g-------~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
|.+.+.+.|..+ ..++...|++.+++.+++.+..++.
T Consensus 445 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~l 488 (502)
T TIGR00887 445 QFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLI 488 (502)
T ss_pred HHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEe
Confidence 999999988532 1124567777777777776654433
No 107
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.82 E-value=1.9e-19 Score=199.84 Aligned_cols=254 Identities=17% Similarity=0.181 Sum_probs=191.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+...+++.|++|+|+|+++.++.+....+|..+++.+++.+.+ ..|||++|++.+.+.++..+..+
T Consensus 99 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 177 (385)
T TIGR00710 99 LRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILV-WLSWHAIFAFLSLAGILLSALIF 177 (385)
T ss_pred HHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999 89999999998887777766666
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||+++.+++.+.++
T Consensus 178 ~~~~~~~~~~~~~~~~~--------------------------------------------------------------- 194 (385)
T TIGR00710 178 FILPETLPYEARIQIST--------------------------------------------------------------- 194 (385)
T ss_pred HhCCCCCCCcccCCHHH---------------------------------------------------------------
Confidence 66555432211100000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
...+.++++|||+++...+...+.....+....+.|.++++.+|+++.+
T Consensus 195 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 195 -------------------------------YFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred -------------------------------HHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence 0123567788999988888877778888888899999999889999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---C-CChhHHHHHHHHHHHH
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---G-CNTSMVAIFFTIGMAF 316 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~l~~~~ 316 (817)
.+.+..+..++..+++++.|++.||+++|+. ...+..+..++...+... . +..........+.+.+
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 313 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKKWGAKSL----------LRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIG 313 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998875 444444444433333222 1 1222223333334444
Q ss_pred hhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccc
Q psy11734 317 MGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVG 359 (817)
Q Consensus 317 ~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g 359 (817)
.+...+.......|..|++++++.++.+..++.++.+.+.+.+
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~i~~~~~~ 356 (385)
T TIGR00710 314 NSMISSIAMAYALEDFPHVAGTASALFGTLRLVLGAIVGYLVS 356 (385)
T ss_pred HHHHHHHHHHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555555556666777889999999999999876666666655
No 108
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.81 E-value=9.9e-18 Score=186.85 Aligned_cols=390 Identities=13% Similarity=0.151 Sum_probs=252.1
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATL 284 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~ 284 (817)
++..+..++..+..........|.+ ++.+|.|..++|++.++..++..++++..|++.||+|+|+. +..
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~----------~~~ 73 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAG----------ILL 73 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHH----------HHH
Confidence 4555556665555554445666655 66689999999999999999999999999999999999986 777
Q ss_pred HhHHHHHHHHhhhcc--CCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734 285 GAVLPGVGALAASYV--GCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 285 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
+..+..++...+... .++.+.......+.+.+.+...+..+....+..| +++++..++.+....+|+.++|.+.+.+
T Consensus 74 g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l 153 (410)
T TIGR00885 74 GLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQL 153 (410)
T ss_pred HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 887777776665332 2245555555566666666666666666666555 7899999999999999999999998877
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
............... ..+.... ...+....+|+..|++.+++.++..++..+. + .++.
T Consensus 154 ~~~~~~~~~~~~~~~------------------~~~~~~~-~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~-~-~p~~- 211 (410)
T TIGR00885 154 ILSNLPHQSQDVLDK------------------LSPEELS-AIKHSDLASVQTPYMIIGAVVLAVALLIMLT-K-MPAL- 211 (410)
T ss_pred HhcCCccchhhhhhh------------------cCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-c-CCCC-
Confidence 643210000000000 0000000 0001123479999998888766554433221 1 1110
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
+++ + ++ +-+
T Consensus 212 ~~~----------------------------------~--------------------------~~-------~~~---- 220 (410)
T TIGR00885 212 NHS----------------------------------D--------------------------AK-------QIS---- 220 (410)
T ss_pred Ccc----------------------------------c--------------------------cc-------ccc----
Confidence 000 0 00 000
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
..++.++++|
T Consensus 221 ----------------------------------------------------------------------~~~~~~~~~~ 230 (410)
T TIGR00885 221 ----------------------------------------------------------------------FSASLSRLAR 230 (410)
T ss_pred ----------------------------------------------------------------------chhhHHHHHh
Confidence 0012346778
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh-CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI-GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKV 680 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~-g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~ 680 (817)
+|+++...+..+++.....+..++++.|+++.. +.+...++.+.+.......+|+++++++.||+++|+.+
T Consensus 231 ~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l-------- 302 (410)
T TIGR00885 231 IRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVL-------- 302 (410)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--------
Confidence 888888888888888888888999999997632 44555556666677788899999999999999887543
Q ss_pred HHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHH-HHHHHHHHHHHHHhHHHHHHH
Q psy11734 681 FATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGT-IMALSNGLGCVSGMVAPLTVG 759 (817)
Q Consensus 681 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~g~~i~p~~~g 759 (817)
.+...+..+++++....+ +. .....+.+.+++.+..+|..++...+..+++..+ +.++... .+|+++.|.+.|
T Consensus 303 --~i~~~~~~~~~ll~~~~~-~~-~~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G 376 (410)
T TIGR00885 303 --MAYAIIGMALCLGSIFAG-GH-VGLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQG 376 (410)
T ss_pred --HHHHHHHHHHHHHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH--HhccchHHHHHH
Confidence 345555555555555543 32 3355555666777777788888888777755444 4444443 399999999999
Q ss_pred HhhcCCc---cccHHHHHHHHHHHHH
Q psy11734 760 FLTQNKT---LLEWRVVFWIMFLTLF 782 (817)
Q Consensus 760 ~~~~~~g---~~~~~~~~~~~~~~~~ 782 (817)
.+.|..+ .++++..|++...+.+
T Consensus 377 ~~~d~~~~~~~~~~~~~~~~~~~~~~ 402 (410)
T TIGR00885 377 FIIDMKEIAAAPAVNTSFILPLLCFA 402 (410)
T ss_pred HHHHHhcccccCccchHHHHHHHHHH
Confidence 9999641 1135666665444433
No 109
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.81 E-value=1.5e-19 Score=207.68 Aligned_cols=285 Identities=14% Similarity=0.132 Sum_probs=177.0
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc----------------------cc
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS----------------------FT 58 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~----------------------~~ 58 (817)
+|+++|++.|..+|....++.|++|+|+|++++++.+....+|..+++.++.++.. ..
T Consensus 121 ~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (502)
T TIGR00887 121 WRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVD 200 (502)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhc
Confidence 48999999999999999999999999999999999999999999999998876532 01
Q ss_pred cCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHH-----hHhhhhccccccccccccccCccccchhhhhhhhc
Q psy11734 59 ASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKER-----KYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYG 133 (817)
Q Consensus 59 ~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (817)
.+||++|.+.+++.++..+. .+++||+|+ +...+++ .+...+....+. ++++.+.++
T Consensus 201 ~~WR~~~~~~~ip~~i~~~~-~~~lpESpr---~l~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~------------- 262 (502)
T TIGR00887 201 YMWRILIGFGAVPALLALYF-RLTIPETPR---YTADVAKDVEQAASDMSAVLQVKI-EAEPDEVEK------------- 262 (502)
T ss_pred ccHHHHHHHHHHHHHHHHHH-HHhCCCCHH---HHHHhCcchHHHHHHHHHHhcccc-ccCcccccc-------------
Confidence 47999998877766655444 445566554 3211111 111111100000 000000000
Q ss_pred hhhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhch---h----HH
Q psy11734 134 YTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSL---P----VW 206 (817)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~----~~ 206 (817)
.+..+++.+.+++++++++ + .+
T Consensus 263 ---------------------------------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 291 (502)
T TIGR00887 263 ---------------------------------------------------ASTAVEVPKASWSDFFTHFFKWRHGKHLL 291 (502)
T ss_pred ---------------------------------------------------hhccccchhhhHHHHHHHHhhhHHHHHHH
Confidence 0000011123566776531 2 22
Q ss_pred HHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccch------------hhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734 207 SLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGV------------LSALPFLIMWLVSMSSSALADFFIARDILSR 274 (817)
Q Consensus 207 ~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~------------~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~ 274 (817)
......++....+|+...|.|.++++ .|++..+++. ......++.+++.+++++++||+|||+.
T Consensus 292 ~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~--- 367 (502)
T TIGR00887 292 GTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPI--- 367 (502)
T ss_pred HHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhH---
Confidence 23334455566788888999999976 6887654332 1233445677788999999999999985
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhccCC--ChhHHHHHHHHHHHH-hhhccccccccccccCC-CchhHHHHHHHhhhhhc
Q psy11734 275 TNVRKVFATLGAVLPGVGALAASYVGC--NTSMVAIFFTIGMAF-MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS 350 (817)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~-~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg 350 (817)
...+..+..+++..+....+ +............+. .....+....+..|..| +.|+++.|+.+.+.+++
T Consensus 368 -------l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~ 440 (502)
T TIGR00887 368 -------QLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAG 440 (502)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhH
Confidence 45555555544443332211 111111222222222 22233445666788887 78999999999999999
Q ss_pred ccccccccceecccc
Q psy11734 351 GMVAPLTVGFLTQNI 365 (817)
Q Consensus 351 ~~~~~~i~g~l~~~~ 365 (817)
++++|.+.+.+.|..
T Consensus 441 ~~~~~~~~~~l~~~~ 455 (502)
T TIGR00887 441 AIIGQFGFLYLAQHG 455 (502)
T ss_pred HHHHHHHhhhhhccc
Confidence 999999999988754
No 110
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.81 E-value=8.8e-19 Score=194.67 Aligned_cols=274 Identities=18% Similarity=0.192 Sum_probs=197.2
Q ss_pred HHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccc--cCChhhHHHHHH--HHHH---H
Q psy11734 461 TLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKF--DWDERTQGVILS--AFYY---G 533 (817)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~g~~~s--~~~~---~ 533 (817)
+.+++|++.++...+.+.+ ++ +.++++.+.+.+ .+.. +
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 47 (394)
T TIGR00883 3 AVEWFDFYLYGFAAVLVFH-----------------------------------TFFPPSGDPLVALLATFATFAAGFLA 47 (394)
T ss_pred chhHHHHHHHHHHHHHHHH-----------------------------------HhcCCCCChHHHHHHHHHHHHHHHHH
Confidence 5678899999988877776 33 244555555444 3333 3
Q ss_pred HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchH--------HHHHHHHHHhhhcc--------------
Q psy11734 534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPV--------SMTVLRFLEGVGED-------------- 591 (817)
Q Consensus 534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~--------~l~~~R~l~Gig~~-------------- 591 (817)
..+++++.|+++||+|||+++..+.++.+++.+++++++ +++ .+++.|+++|++.+
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~ 125 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLP--SYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYA 125 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCC--ChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcC
Confidence 347899999999999999999999999999999999998 765 48999999999877
Q ss_pred -----------------------------------------------------------------c--------------
Q psy11734 592 -----------------------------------------------------------------L-------------- 592 (817)
Q Consensus 592 -----------------------------------------------------------------~-------------- 592 (817)
+
T Consensus 126 ~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (394)
T TIGR00883 126 PPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYLRRNLEETPVFEKAQEKHKK 205 (394)
T ss_pred CcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHhcccc
Confidence 0
Q ss_pred -CchhHHhhcCHh--HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 593 -ETPWAAILSSLP--VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 593 -~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
..+.++.+++++ ++......++.....+....+.|.|+++++|.+..+.+.......+.+.++.++.|+++||+|||
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~ 285 (394)
T TIGR00883 206 KRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR 285 (394)
T ss_pred ccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH
Confidence 001223444443 66666677777778888889999999888899999999999999999999999999999999987
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHH-HHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHH-H
Q psy11734 670 DILSRTNVRKVFATLGAVLPGVGALA-ASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSN-G 745 (817)
Q Consensus 670 ~~~~~~~~r~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~-~ 745 (817)
+.+ ...+.......... .... ..+.+.......+.+++.+...+...+...|..| ++|+++.++.+ .
T Consensus 286 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 356 (394)
T TIGR00883 286 PVL---------IIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNL 356 (394)
T ss_pred HHH---------HHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHh
Confidence 642 11222222222111 2222 2233444444455555556666777788888888 67999999854 4
Q ss_pred HHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHH
Q psy11734 746 LGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLF 782 (817)
Q Consensus 746 ~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~ 782 (817)
...+++.++|.+.|.+.|+.+. |+..++...++.+
T Consensus 357 ~~~~g~~~~p~~~g~l~~~~g~--~~~~~~~~~~~~l 391 (394)
T TIGR00883 357 AGAIFGGFAPYIAAALVAMTGD--WYAIGYYLAALAL 391 (394)
T ss_pred HHHHHhhHHHHHHHHHHHHcCc--chhHHHHHHHHHH
Confidence 4557888999999999998753 6565555554443
No 111
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.81 E-value=6.3e-20 Score=201.74 Aligned_cols=265 Identities=12% Similarity=0.073 Sum_probs=198.7
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|||+++.++.+....+|..++|.+++++.+ ..|||+.|++.++..++..+..+
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 176 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYA-TLGIKWAIWVDAVGFAISALLIV 176 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999 89999999998766655544433
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
...++++++++. ++.+.+ ..
T Consensus 177 ~~~~~~~~~~~~-~~~~~~-~~---------------------------------------------------------- 196 (365)
T TIGR00900 177 SVRIPELAASEI-QALSNA-VL---------------------------------------------------------- 196 (365)
T ss_pred hcccccCCCccc-cccchh-HH----------------------------------------------------------
Confidence 332211111000 000000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHh-hchhhHHHHhhCCccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIS-TDLPKYMSEVIGLSVA 239 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~ 239 (817)
++.++.++.++|||.++...+..++......... .+.|.|.++.+|.+..
T Consensus 197 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (365)
T TIGR00900 197 -----------------------------RDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGST 247 (365)
T ss_pred -----------------------------HHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchH
Confidence 0012235678899999888888888777777776 8899999988899999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
+.+.......++..++.++.+++.||.++|+. ...+..+.++++..+.+.+++.+...+...+.+++.+.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (365)
T TIGR00900 248 HYGWVLAAFGLGALLGALLLGLLGRYFKRMAL----------MTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP 317 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchhHH----------HHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988874 55555555555555544432233444444445555555
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..+.......+..| ++|+++.|+.+...++++.++|.+.|.+.|+.
T Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~~~g~l~~~~ 364 (365)
T TIGR00900 318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHAAWPLGLILAGPLADHL 364 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 55666666666554 78999999999999999999999999998875
No 112
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.81 E-value=1e-19 Score=206.12 Aligned_cols=282 Identities=13% Similarity=0.121 Sum_probs=190.4
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.|...+...+++.+++| ++|+++.|+.+.+..+|..++|++++.+.+ ..|||++|++.+++.++..+..++
T Consensus 115 ~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~-~~gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 115 GFITGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFE-SFGWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHHHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHH-HhChHHHHHHHHHHHHHHHHHHHH
Confidence 688999999877888899999995 899999999999999999999999999999 899999999999887766655555
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
..+++++.++..++ +.+ .... +...++......
T Consensus 193 ~~~~~~~~~~~~~~-~~~----~~~~-~~~~~~~~~~~~----------------------------------------- 225 (455)
T TIGR00892 193 MRPVGPSQRVSKSK-SKE----GLPP-DGSTKKLSKKST----------------------------------------- 225 (455)
T ss_pred hCCCCccccccccc-ccc----cCCC-CCccccccccch-----------------------------------------
Confidence 44332211100000 000 0000 000000000000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
.++..+....+++|+|+++...+..++...+.+....++|.|+++ +|++..++
T Consensus 226 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~~ 278 (455)
T TIGR00892 226 --------------------------AEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYEA 278 (455)
T ss_pred --------------------------hhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHHH
Confidence 000001112368899999988888888888888888999999987 69999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 321 (817)
+.+..+.+++.+++++++|+++||...++. |+.....+....+++++...... +.+...+...+.+.+.+...
T Consensus 279 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~------~~~~~~~~~~~~~l~~ll~~~~~-~~~~~~i~~~~~G~~~g~~~ 351 (455)
T TIGR00892 279 AFLLSIIGFVDIFARPSCGLIAGLKWIRPH------VQYLFSFALLFNGLTHLLCALAG-DYTGLVIYCIFFGLSFGSVG 351 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccCHH------HHHHHHHHHHHHHHHHHHHHHhc-hHHHHHHHHHHHHHHhchHH
Confidence 999999999999999999999997422110 11122233333333333333322 44444444444444555555
Q ss_pred cccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 322 ASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 322 ~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
+.......+. ++++++++.|+.+...++|++++|.+.|.+.|..+
T Consensus 352 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g 397 (455)
T TIGR00892 352 ALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATK 397 (455)
T ss_pred HHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcC
Confidence 5555555554 55789999999999999999999999999998753
No 113
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.81 E-value=4.1e-17 Score=186.32 Aligned_cols=434 Identities=13% Similarity=0.078 Sum_probs=257.4
Q ss_pred HHHHhhchh-HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCccc
Q psy11734 196 WAAILYSLP-VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILS 273 (817)
Q Consensus 196 ~~~l~~~~~-~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~ 273 (817)
..+++|+|+ ++..+...++...++|++..++|.|+++.+|+|..+++..............+++|+++|| +|||+.
T Consensus 13 ~~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~-- 90 (500)
T PRK09584 13 SLNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRV-- 90 (500)
T ss_pred ChhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH--
Confidence 457788885 8899999999999999999999999999899999998887777666666666789999999 599986
Q ss_pred chhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhc
Q psy11734 274 RTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVS 350 (817)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg 350 (817)
+..+..+..++...+....++.........+.+.+.+...+.......+..| + ++..+.++.+...++|
T Consensus 91 --------~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG 162 (500)
T PRK09584 91 --------IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIG 162 (500)
T ss_pred --------HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHH
Confidence 6777777777766665543333333344444455566666666666777655 3 3556889999999999
Q ss_pred ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734 351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF 430 (817)
Q Consensus 351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~ 430 (817)
+.++|.+.|.+.|+. +|++.|.+.++..+++.+.+
T Consensus 163 ~~~gp~i~g~l~~~~---------------------------------------------g~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 163 SFFSMLATPWLAAKY---------------------------------------------GWSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHHHHHHHHhh---------------------------------------------CHHHHHHHHHHHHHHHHHHH
Confidence 999999999988764 69999999887766666544
Q ss_pred eeeccccccc-ccCCCCchh--HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeec
Q psy11734 431 VLFGSGEVQY-WNESILPAR--YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSK 507 (817)
Q Consensus 431 ~~~~~~~~~~-~~~~~~~~~--~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (817)
++..+.-++. .+++..+.+ ...+....+..+....+.. + .+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-------~~---------------------------- 241 (500)
T PRK09584 198 AFCQRWVKQYGSKPDFEPINYRKLLLTIVGVVALIAIATWL-L-------HN---------------------------- 241 (500)
T ss_pred HHhHHHhccCCCCCCccccchhhHHHHHHHHHHHHHHHHHH-H-------hc----------------------------
Confidence 4432211111 001101111 1111111111111110000 0 00
Q ss_pred ccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHh
Q psy11734 508 TYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEG 587 (817)
Q Consensus 508 ~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~G 587 (817)
. + ..++.....++.. .. .+.. .
T Consensus 242 -------~---~----------------------------~~~~~~~~~~~~~-----~~-~~~~--~------------ 263 (500)
T PRK09584 242 -------Q---E----------------------------IARMALGVVALGI-----VV-IFGK--E------------ 263 (500)
T ss_pred -------c---h----------------------------HHHHHHHHHHHHH-----HH-HHHH--H------------
Confidence 0 0 0000000000000 00 0000 0
Q ss_pred hhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH--HhCCCh------hHHHHHHHHHHHHHHHHHHHH
Q psy11734 588 VGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQ--VIGLSV------AENGVLSALPFLIMWLVSMSS 659 (817)
Q Consensus 588 ig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~--~~g~s~------~~~~~~~~~~~~~~~ig~~~~ 659 (817)
..+.++.-| ++.+.. +..+.....++......|.++.. ..+.+. ...+++.++..+..++..++.
T Consensus 264 -----~~~~~~~~~-~~~~~~-~~~~~~~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~ 336 (500)
T PRK09584 264 -----AFAMKGAAR-RKMIVA-FILMLEAIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPIL 336 (500)
T ss_pred -----HhhcCHHHH-HHHHHH-HHHHHHHHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHH
Confidence 001111222 222222 22335556677777777777664 222222 125566677777888888888
Q ss_pred HHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC--------chHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734 660 SALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC--------NTSMVAICFTIGMAFMGFCYASIRVNPIDL 731 (817)
Q Consensus 660 g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (817)
+++-+|.++|.. ...-..+++++.+++++.+..... +.++.+...++.+.+..+..|.......+.
T Consensus 337 ~~~~~~l~~r~~------~~~~~~~G~~l~~l~f~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~ 410 (500)
T PRK09584 337 AAIYNKMGDRLP------MPHKFAIGMVLCSGAFLVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAMVAQL 410 (500)
T ss_pred HHHHHHhCcCCC------cHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHh
Confidence 777777776531 233445677777777766554321 245666667777777777778888888888
Q ss_pred CC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc------CC-ccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 732 SP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ------NK-TLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 732 ~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~------~~-g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
.| +.||..+|+......+|+.++..+.+.... .. ..+++...|...+...++..++.+..
T Consensus 411 aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~ 478 (500)
T PRK09584 411 VPQRLMGFIMGSWFLTTAGAALIAGYVANLMAVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLT 478 (500)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88 789999997765555555555555432211 00 01236677877777766555444443
No 114
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.80 E-value=1.9e-19 Score=205.46 Aligned_cols=320 Identities=13% Similarity=0.106 Sum_probs=200.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhh---hhhcccccCcchhHHHHhhhHHHHHh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCS---GLIMSFTASWANVFYIFGAIAVLWFA 77 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~---~~l~~~~~gWr~~f~i~~~~~~i~~~ 77 (817)
.|+++|+|.+...+...++++|++|+++|++++++.+.+..+|..+++.++ ....+ ..+||++|++.++..++. +
T Consensus 133 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~-~~~w~~~f~~~~~~~~~~-~ 210 (481)
T TIGR00879 133 GRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNN-TLGWRIPLGLQLIPAGLL-F 210 (481)
T ss_pred HHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCC-CccHHHHHHHHHHHHHHH-H
Confidence 388999999999999999999999999999999999999999999999999 77767 789999999966555444 4
Q ss_pred hhhheeccCCCCCCC-CCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 78 FWCILCFNDPKSHPY-ISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 78 ~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
+..+++||+|+.... .+.++..+...+... .++++.+..+. ...
T Consensus 211 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~------------------------------- 255 (481)
T TIGR00879 211 LGLFFLPESPRWLVGKGRVEEARKSLARLRG---TSGEDKELLDE-LEL------------------------------- 255 (481)
T ss_pred HHHhcCCCChHHHHHcCChHHHHHHHHHHhC---CCCCcHHHHHH-HHH-------------------------------
Confidence 445556665531100 011110000000000 00000000000 000
Q ss_pred HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh------chhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY------SLPVWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
. ...+..+. +. .+..+.++++ .+.++...+..+......+....+.|.++
T Consensus 256 -------~---------------~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (481)
T TIGR00879 256 -------I---------------DIKRSIEK-RS-VQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIF 311 (481)
T ss_pred -------H---------------HHHHHHHH-hh-ccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHH
Confidence 0 00000000 00 0111333332 23344444444444444455566777777
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---ccCCC-----
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---YVGCN----- 302 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----- 302 (817)
++ +|++..+++....+..++..++.+++|+++||++||+. ...+..+..+++..+. ....+
T Consensus 312 ~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (481)
T TIGR00879 312 EN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPL----------LLIGAAGMAICLFVLGILGASFVTGSSKS 380 (481)
T ss_pred HH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHHHHhhcccCCcccc
Confidence 65 69999888999999999999999999999999999885 4555555555544443 11111
Q ss_pred -hhHHHHHHHHHHHHhh-hccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCcc
Q psy11734 303 -TSMVAIFFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSG 379 (817)
Q Consensus 303 -~~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~ 379 (817)
.........+..++.+ ...+.......|..| ++|+++.|+.+...++|++++|.+.+.+.++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~-------------- 446 (481)
T TIGR00879 381 SGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESI-------------- 446 (481)
T ss_pred hhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 2222222222222222 233445666677666 68999999999999999999999999887764
Q ss_pred chhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 380 TIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
+|+..|++.+++.+++.++..++.+++
T Consensus 447 -------------------------------~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 447 -------------------------------GVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred -------------------------------CccceehhHHHHHHHHHHHHheecccC
Confidence 578888888888888777766655443
No 115
>KOG2504|consensus
Probab=99.80 E-value=4.1e-18 Score=191.91 Aligned_cols=411 Identities=17% Similarity=0.126 Sum_probs=284.4
Q ss_pred HHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc
Q psy11734 219 LYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY 298 (817)
Q Consensus 219 ~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (817)
.+.+-...+.+. +.++.+..+++++.........+..++.+.+.||+|.|.+ .+.|.++..+++++..+
T Consensus 62 ~~~~Gv~~~~~~-~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v----------~i~G~~v~~~g~~lssF 130 (509)
T KOG2504|consen 62 INSFGLLFEELM-DYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTV----------MIAGGLVAALGLLLSSF 130 (509)
T ss_pred hheehhhHHHHH-HHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHH----------HHHHHHHHHHHHHHHHH
Confidence 333333344444 4478888889999999999999999999999999999986 88999999999999988
Q ss_pred cCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCc
Q psy11734 299 VGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFS 378 (817)
Q Consensus 299 ~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~ 378 (817)
..+-+...+..=.+.+.+.++.+....+.+...++|+|+.|+|+...-..+|..+-|.+...+.++.
T Consensus 131 ~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~------------- 197 (509)
T KOG2504|consen 131 ATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKY------------- 197 (509)
T ss_pred HhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHh-------------
Confidence 8753444444445555666666776777777888999999999999888888888888877777765
Q ss_pred cchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHH
Q psy11734 379 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCM 458 (817)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~ 458 (817)
|||+.+++.+.+.+-..+.....++......++...+.+.
T Consensus 198 --------------------------------G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~~~~~~~~-------- 237 (509)
T KOG2504|consen 198 --------------------------------GWRGALLIFGGISLNVLVAGALLRPLSPPKKPNEEKDLRN-------- 237 (509)
T ss_pred --------------------------------CcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCchhhhhhcc--------
Confidence 6999999999988766666666554322211111111110
Q ss_pred HHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc---cccccCChhhHHHHHHHHHHHHH
Q psy11734 459 GVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL---DAKFDWDERTQGVILSAFYYGYI 535 (817)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~s~~~~g~~~s~~~~~~~ 535 (817)
..+..+-++++..+........... ..+++.+.. .++......+....
T Consensus 238 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 288 (509)
T KOG2504|consen 238 ------------------SAASVESTPKPVELRISERDSGLKK--LSLSNLATLKRGPDKWRNSPLQAFLS--------- 288 (509)
T ss_pred ------------------ccccccccccccccccccCCCCCCc--ccccchhhhhhCCccccccchhhhhh---------
Confidence 0010011111111111000000000 000000000 00000001111000
Q ss_pred HhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHH
Q psy11734 536 LTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGH 615 (817)
Q Consensus 536 i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~ 615 (817)
+- -.+++++|.++...+...+.
T Consensus 289 ----------------------------------~~------------------------d~~ll~~~~fl~~~~~~~~~ 310 (509)
T KOG2504|consen 289 ----------------------------------ML------------------------DLSLLKDPKFLLLALSNLFA 310 (509)
T ss_pred ----------------------------------hh------------------------hHHHHcCchHHHHHHHHHHH
Confidence 11 15789999999999999999
Q ss_pred HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734 616 DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695 (817)
Q Consensus 616 ~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 695 (817)
..+++....++|.|.++ ++++..+++.+.+..++..+++++..|+++|+...+ ++.....+.+..++..+.
T Consensus 311 ~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~--------~~~~~~~~ll~~gl~~~~ 381 (509)
T KOG2504|consen 311 YLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIR--------ALVLFLLTLLIAGLARLF 381 (509)
T ss_pred HHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccc--------hHHHHHHHHHHHHHHHHH
Confidence 99999999999999995 799999999999999999999999999999998843 233445666666666655
Q ss_pred HHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHH
Q psy11734 696 ASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVF 774 (817)
Q Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~ 774 (817)
..... +.+.......+.+++.+...+.......|..+ +.-..+.|+...+..++..++|.+.|.+.|.+++ |...|
T Consensus 382 ~p~~~-~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~--Y~~~f 458 (509)
T KOG2504|consen 382 LPFAT-TYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGN--YDHAF 458 (509)
T ss_pred HHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCC--eeeeh
Confidence 55543 44455555555666666555555567777777 8899999999999999999999999999999864 88999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy11734 775 WIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 775 ~~~~~~~~i~~~~~~~~~ 792 (817)
+.++++.+++...+...+
T Consensus 459 ~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 459 YFCGLCFLLSAVLLLILR 476 (509)
T ss_pred hhcChHHHHHHHHHHHhH
Confidence 999999999887777665
No 116
>PRK15075 citrate-proton symporter; Provisional
Probab=99.80 E-value=3.1e-19 Score=201.29 Aligned_cols=260 Identities=16% Similarity=0.133 Sum_probs=170.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~ 72 (817)
.|+++|++.|..+|....+++|++|+|+|++++++...+..+|..+++.+++.+. + ..|||++|++..+..
T Consensus 123 ~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~-~~gWr~~f~~~~~~~ 201 (434)
T PRK15075 123 GRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMA-EWGWRIPFLIGCLIV 201 (434)
T ss_pred HHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHh-ccchHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999998888888888877763 4 689999999854332
Q ss_pred HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734 73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH 152 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (817)
.+ . ++.++.+++.+ +...+ . +++ ++
T Consensus 202 ~~----~-~~~~~~~~e~~---~~~~~--~---------~~~--~~---------------------------------- 226 (434)
T PRK15075 202 PF----I-FLIRRSLEETE---EFLAR--K---------HRP--SM---------------------------------- 226 (434)
T ss_pred HH----H-HHHHHhcCCCH---HHHHh--h---------hcc--cc----------------------------------
Confidence 11 1 12232222110 00000 0 000 00
Q ss_pred chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHH-HHHHHHHHHHHHHHhhchhhHHH
Q psy11734 153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSL-IISEVGHDYGLYLISTDLPKYMS 231 (817)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~i~~~~~~~~~~~~~~~~p~~l~ 231 (817)
+..++++.++++.+.. ....++.....+....|.|.|++
T Consensus 227 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 266 (434)
T PRK15075 227 ----------------------------------------REIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGK 266 (434)
T ss_pred ----------------------------------------ccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1113344556555433 34444556677888999999999
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH-HHHhh-hc-cCCChhHHHH
Q psy11734 232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV-GALAA-SY-VGCNTSMVAI 308 (817)
Q Consensus 232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~ 308 (817)
+.+|++..+++++..+..+++.++.+++|+++||++||+. ...+..+..+ ..... .. ..++......
T Consensus 267 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 267 TVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPV----------LIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 9889999999998889999999999999999999998875 3333222221 11111 11 1222222222
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccccccceeccccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~~ 366 (817)
...+.+.+.+...+.......|..| ++|+++.|+.+.+.. +++.++|.+.|.+.|+.|
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g 396 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTG 396 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcC
Confidence 2222333344444444455666555 789999999766655 468899999999988763
No 117
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.80 E-value=6.5e-19 Score=195.00 Aligned_cols=254 Identities=15% Similarity=0.175 Sum_probs=182.8
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+...+++.|++|+|+|++++++......+|..++|.+++.+.+ ..|||+.|++.+.+.++..+...
T Consensus 85 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 163 (377)
T PRK11102 85 MRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLV-WFSWHAIFWVLALAAILAAALVF 163 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcChHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999 89999999998888777766666
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||++++++..+.+ ++
T Consensus 164 ~~~~~~~~~~~~~~~~---------------------~~----------------------------------------- 181 (377)
T PRK11102 164 FFIPETLPKERRQPFH---------------------LR----------------------------------------- 181 (377)
T ss_pred HhCCccCcccccCCCC---------------------hH-----------------------------------------
Confidence 6666543211100000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+...++++++|+|+++...+..++.....+....+.|.++.+.+|+++.+
T Consensus 182 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 182 ------------------------------TTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred ------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 00123567889999888777777777788888889999998888999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH---HHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG---VGALAASYVGCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (817)
.|....+..++..+++++.|++.||+++|+. ...+..+.. +.+......+.+.+.......+.....
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGALNM----------LRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCV 301 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH----------HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999875 444443322 222222222222222222222223333
Q ss_pred hhccccccccccccCCCchhHHHHHHHhhhh-hcccccccc
Q psy11734 318 GFCYASIRVNPIDLSPNFSGTIMALSNGLGC-VSGMVAPLT 357 (817)
Q Consensus 318 g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~-lg~~~~~~i 357 (817)
+...+.......|..|++++++.++.+..++ +|+.+++.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~g~~~ 342 (377)
T PRK11102 302 SMISSNAMAVILDEFPHMAGTASSLAGTLRFGIGAIVGALL 342 (377)
T ss_pred HHhhHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333445567778999999999888766 444444444
No 118
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.79 E-value=2.3e-19 Score=199.33 Aligned_cols=258 Identities=11% Similarity=0.030 Sum_probs=183.7
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|++||++.+...|...+++.|++|+|||+++.|+.+....+|.++||.++|++.+ . .|+..+++.+...++. .+..
T Consensus 94 ~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~-~-~~~~~~~i~~~~~~~~-~~~~ 170 (393)
T PRK11195 94 AYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALAD-P-HAEAALAVCALIYLLA-ALFN 170 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H-HHHHHHHHHHHHHHHH-HHHH
Confidence 38899999999999999999999999999999999999999999999999999998 4 4888888776544333 3344
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+||+|++++..++++... .+
T Consensus 171 ~~l~~~~~~~~~~~~~~~~~-~~--------------------------------------------------------- 192 (393)
T PRK11195 171 LFIPRLGARRPGQSWNPIAL-LR--------------------------------------------------------- 192 (393)
T ss_pred hcCCCCcccccccCCCHHHH-HH---------------------------------------------------------
Confidence 55665443221110000000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+.++.+++++++|.+........+.........+..|.|+++.+|+++.+
T Consensus 193 ------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~ 242 (393)
T PRK11195 193 ------------------------------DFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQ 242 (393)
T ss_pred ------------------------------HHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 00112457788888776666655556666677777888999889999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.|++..+..++.+++++..+++.||.++++. +..+... ++....+... ++.+.......+.+.+.+..
T Consensus 243 ~G~~~~~~~~g~i~g~~~~~~l~~~~~~~~~----------~~~g~~~-~~~~~~~~~~-~~~~~~~~~~~~~G~~~g~~ 310 (393)
T PRK11195 243 PAYLQAVVAIGIAVGAGAAARLVTLETVLRV----------LPAGILM-GLVVLLMALQ-HSLLPAYPLLILIGALGGFF 310 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcccch----------HHHHHHH-HHHHHHHHHH-hHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999999999999998877764 4444432 3333233332 23443444444455555555
Q ss_pred cccccccccccCCCc--hhHHHHHHHhhhhhccccccccccee
Q psy11734 321 YASIRVNPIDLSPNF--SGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~--~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
.+......++..|++ +|++.++.|+.++++..++..+.+.+
T Consensus 311 ~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~~~ 353 (393)
T PRK11195 311 VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYSLL 353 (393)
T ss_pred hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHHHH
Confidence 555555666777753 69999999999999999999998854
No 119
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.79 E-value=2e-17 Score=209.23 Aligned_cols=385 Identities=12% Similarity=0.030 Sum_probs=252.3
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhH----HHHhhCCc-ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734 197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKY----MSEVIGLS-VAENGVLSALPFLIMWLVSMSSSALADFFIARDI 271 (817)
Q Consensus 197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~----l~~~~g~s-~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~ 271 (817)
..+++++.+...++..++....-+....-++.+ +.+..+.+ ....++......+..++.++++|+++||++||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 457888888777777666555543332222212 22211111 2345677777889999999999999999999974
Q ss_pred ccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhc
Q psy11734 272 LSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS 350 (817)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg 350 (817)
. +.+........+.+. +.+..++.+..++..++.+.+.++..+...+.+.+..| ++++.++|+.++..++|
T Consensus 85 ~------~~~~~~~~~~~~~~~--~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig 156 (1140)
T PRK06814 85 A------KILKFAEIGIAALAI--YGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIA 156 (1140)
T ss_pred H------HHHHHHHHHHHHHHH--HHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHH
Confidence 1 011112222222211 12222356666666666677777777777777767555 78999999999999999
Q ss_pred ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734 351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF 430 (817)
Q Consensus 351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~ 430 (817)
.++||.++|.+.+.. +|+..|+..+++.+++.++.
T Consensus 157 ~~igp~l~g~l~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~ 191 (1140)
T PRK06814 157 ILLGTIIGGLATISG---------------------------------------------NFVILVALLMGIAVLGWLAS 191 (1140)
T ss_pred HHHHHHHHHHHHhcc---------------------------------------------ccHHHHHHHHHHHHHHHHHH
Confidence 999999999987654 68888855555555555554
Q ss_pred eeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccc
Q psy11734 431 VLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYT 510 (817)
Q Consensus 431 ~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (817)
.++.+.+++. +.. +.
T Consensus 192 ~~~~~~~~~~-~~~--~~-------------------------------------------------------------- 206 (1140)
T PRK06814 192 LFIPKTGNAA-PDL--KI-------------------------------------------------------------- 206 (1140)
T ss_pred hhCCCCCCCC-CCC--ee--------------------------------------------------------------
Confidence 4443322111 000 00
Q ss_pred cccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhc
Q psy11734 511 TLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGE 590 (817)
Q Consensus 511 ~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~ 590 (817)
+. +.. . +.
T Consensus 207 ----~~--~~~--------------------------------------------------~--~~-------------- 214 (1140)
T PRK06814 207 ----DR--NII--------------------------------------------------R--ST-------------- 214 (1140)
T ss_pred ----cc--chH--------------------------------------------------H--HH--------------
Confidence 00 000 0 00
Q ss_pred ccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734 591 DLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRD 670 (817)
Q Consensus 591 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 670 (817)
...++.+.++|.+|...+..++.......+..++|.|+++.+|.++.+.+.+.+...+++++|.++.|+++||..+++
T Consensus 215 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~ 292 (1140)
T PRK06814 215 --ITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL 292 (1140)
T ss_pred --HHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee
Confidence 012456678899999988888888888889999999999999999999999999999999999999999998877665
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhh-------------------cCchHHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734 671 ILSRTNVRKVFATLGAVLPGVGALAASYV-------------------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDL 731 (817)
Q Consensus 671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (817)
.+. .+.++.+++.+.+.+. ..+.+...+..++.+++.+...+...+..++.
T Consensus 293 ~~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 362 (1140)
T PRK06814 293 YVP----------IGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAW 362 (1140)
T ss_pred eeh----------HHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhh
Confidence 432 2333332322222221 12344455555556666666666777788887
Q ss_pred CC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHH
Q psy11734 732 SP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISN 785 (817)
Q Consensus 732 ~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~ 785 (817)
.| +.+|+++|+.+++.+++..+++.+.|.+.+.. .++...+++++.+.++..
T Consensus 363 ~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~--~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 363 ANPAHRARVIAANNVLNAAFMVAGTIILALLQALG--FSIPWIILFIALANLIVA 415 (1140)
T ss_pred CCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhc--cCHHHHHHHHHHHHHHHH
Confidence 77 78999999999999999999999999987654 225555555555444433
No 120
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.79 E-value=4.2e-19 Score=197.23 Aligned_cols=262 Identities=18% Similarity=0.231 Sum_probs=185.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~ 72 (817)
.|+++|++.+...+...+++.|++|+|||+++.++...+..+|..+++.++..+. + ..+||+.|++.+++.
T Consensus 102 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~-~~~w~~~~~~~~~~~ 180 (394)
T TIGR00883 102 ARLIQGFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALL-EWGWRIPFLVSAVLV 180 (394)
T ss_pred HHHHHHhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhh-ccchHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999999877653 3 579999999877655
Q ss_pred HHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCcc
Q psy11734 73 VLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKH 152 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (817)
++...+ ....||+|+ + +++++ + +
T Consensus 181 ~~~~~~-~~~~~~~~~---~--~~~~~-------~----~---------------------------------------- 203 (394)
T TIGR00883 181 LIGLYL-RRNLEETPV---F--EKAQE-------K----H---------------------------------------- 203 (394)
T ss_pred HHHHHH-HHhcCCChh---H--HHHHh-------c----c----------------------------------------
Confidence 544332 222233221 1 00000 0 0
Q ss_pred chhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh--HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 153 TLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP--VWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
++.+.+.++.++++. ++......++.....+....+.|.|+
T Consensus 204 -------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (394)
T TIGR00883 204 -------------------------------------KKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYL 246 (394)
T ss_pred -------------------------------------ccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 001224566677765 77777777788888888889999999
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh-hhcc-CCChhHHHH
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA-ASYV-GCNTSMVAI 308 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~ 308 (817)
++.+|.+..+.+....+..+++.++.++.|+++||++||+. ....+......+... .... .++......
T Consensus 247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (394)
T TIGR00883 247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPV---------LIIFTVLAALLAVPLLMALLDSGSFTLFFF 317 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHH---------HHHHHHHHHHHHHHHHHHHhcCCchHHHHH
Confidence 88889999999999999999999999999999999998874 122222222222111 1122 223333334
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHH-hhhhhcccccccccceeccccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSN-GLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~-~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
...+.+++.+...+.......|..| ++|+++.++.+ ....+|+.++|.+.|.+.|+.|
T Consensus 318 ~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g 377 (394)
T TIGR00883 318 LVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTG 377 (394)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcC
Confidence 4444445555555666677777666 78999999854 4556889999999999998864
No 121
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.79 E-value=3.5e-19 Score=199.97 Aligned_cols=258 Identities=15% Similarity=0.034 Sum_probs=188.1
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+...+...+.+.|++|+++|+++.++.....++|..+||.+++.+.+ ..||||.|++.+...++..+.. +
T Consensus 117 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~-~~~~~~~~~~~~~~~~~~~~~~-~ 194 (417)
T PRK10489 117 GLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIA-AGGVAWNYGLAAAGTFITLLPL-L 194 (417)
T ss_pred HHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHH-H
Confidence 7788998888888999999999999999999999999999999999999999998 8899999998876666554443 3
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
.+|+++++++ +++. . .
T Consensus 195 ~l~~~~~~~~---~~~~--------~----~------------------------------------------------- 210 (417)
T PRK10489 195 RLPALPPPPQ---PREH--------P----L------------------------------------------------- 210 (417)
T ss_pred hCCCCCCCCc---cccc--------c----h-------------------------------------------------
Confidence 3444322110 0000 0 0
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
++.+.+++.++|+|.++...+..++.. ...+...++|.|+++.+|+++.+.
T Consensus 211 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g~~~~~~ 261 (417)
T PRK10489 211 ----------------------------RSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQMGAAQI 261 (417)
T ss_pred ----------------------------HHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccCCChhHh
Confidence 000123556778888766655554433 345677889999999889999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 321 (817)
|++.....++.++++++.+++.||.++++. +..+..+..+++..+...+ +.........+.+.+.+...
T Consensus 262 g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 262 GLLYAAVPLGAALGALTSGWLAHSARPGLL----------MLLSTLGSFLAVGLFGLMP-MWILAVLCLALFGYLSAISS 330 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhccCcchH----------HHHHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998665553 4455555555555544433 44444444444444444444
Q ss_pred ccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 322 ASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 322 ~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
+......++..| ++||+++|+.+...++|.++||.+.|.+.|..
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~ 375 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMM 375 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHh
Confidence 445566677666 68999999999999999999999999998875
No 122
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.79 E-value=1.6e-17 Score=170.53 Aligned_cols=261 Identities=18% Similarity=0.193 Sum_probs=211.6
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--- 591 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--- 591 (817)
|+|+|.++.|++.++..+++++.+++..+++.|+|.++.+..++++.++++++-... +.+.|+.+-.+.|.|.+
T Consensus 41 ~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~---~~~~L~~gt~l~G~gIav~n 117 (395)
T COG2807 41 DLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG---GLPLLFLGTLLAGAGIAVIN 117 (395)
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHhhHHHHH
Confidence 999999999999999999999999999999999999999999999999999999886 57788999999998888
Q ss_pred -------------------------------------------------------------------c------------
Q psy11734 592 -------------------------------------------------------------------L------------ 592 (817)
Q Consensus 592 -------------------------------------------------------------------~------------ 592 (817)
.
T Consensus 118 VLLPslIK~~Fpk~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~r~~~~~~~~~ 197 (395)
T COG2807 118 VLLPSLIKRDFPKRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQALREQAASIATK 197 (395)
T ss_pred HhhhHHHHhhcccchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 0
Q ss_pred CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734 593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL 672 (817)
Q Consensus 593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 672 (817)
..+-.+++|+|..|.+.+...+.+..+|.+..|+|.++.| .|+|.+++|.+.++..+.+++.+++...+.+|...++.
T Consensus 198 ~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~- 275 (395)
T COG2807 198 LVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRP- 275 (395)
T ss_pred cccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccch-
Confidence 1112357899999999999999999999999999999999 69999999999999999999999999999999554332
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccC--CCchHHHHHHHHHHHHH
Q psy11734 673 SRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCV 749 (817)
Q Consensus 673 ~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~ 749 (817)
+.+....++.++.+.+.+.+.+ ++.. .++.+++.+..++..-+.+.+.. |+..+.-.|+.+.++++
T Consensus 276 --------~~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYl 344 (395)
T COG2807 276 --------LVVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYL 344 (395)
T ss_pred --------HHHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHH
Confidence 2334444444555555554321 2222 34455555566666665555544 47899999999999999
Q ss_pred HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
-+.++|.+.|++.|..| +|...+.......++..+.-+...|
T Consensus 345 lAa~GP~l~G~lhDa~g--sw~~~~~~l~~~~i~m~i~Gl~a~r 386 (395)
T COG2807 345 LAAFGPWLFGFLHDATG--SWSAPLVLLALATLLMLIFGLRAGR 386 (395)
T ss_pred HHhhhhhhHhHHHHhcC--ChHHHHHHHHHHHHHHHHHHhhcch
Confidence 99999999999999995 4988888888777776666665533
No 123
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.79 E-value=6.1e-19 Score=201.20 Aligned_cols=285 Identities=14% Similarity=0.171 Sum_probs=203.4
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
|+++|++.+...+...+++.|++|+|||+++.++...+..+|.++++.+++++.+ . .|||++|++.+.+.++..+..+
T Consensus 114 ~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~-~~~GWr~~f~i~a~l~ll~~l~~~ 192 (491)
T PRK11010 114 AVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLALWLAD-RYLGWQGMYWLMAALLIPCIIATL 192 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHHHHHHHH
Confidence 5677888888889999999999999999999999999999999999999999988 5 5999999999887776655444
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+ .||+++.++ +++.. .
T Consensus 193 ~-~~e~~~~~~---~~~~~-------~----------------------------------------------------- 208 (491)
T PRK11010 193 L-APEPTDTIP---VPKTL-------E----------------------------------------------------- 208 (491)
T ss_pred h-cCCCccccc---cccch-------h-----------------------------------------------------
Confidence 3 555332110 00000 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
++...++++++++|+.+...+..++.....+....+.|.|+.+.+|+|..+
T Consensus 209 -----------------------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~ 259 (491)
T PRK11010 209 -----------------------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGE 259 (491)
T ss_pred -----------------------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 000224667888888877766666666666777788899988778999999
Q ss_pred cchhhh-hhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH---HhhhccCCChhHHHHHHHHHHHH
Q psy11734 241 NGVLSA-LPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA---LAASYVGCNTSMVAIFFTIGMAF 316 (817)
Q Consensus 241 ag~~~~-~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~ 316 (817)
.+.+.. ...++.+++.+++|+++||+++|+. ...+..+..+.. ..+....++.........+....
T Consensus 260 ~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~----------l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~ 329 (491)
T PRK11010 260 VGLVNKTLGLLATIVGALYGGILMQRLSLFRA----------LMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC 329 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 999874 5668999999999999999998874 333333222222 22222222332322233332233
Q ss_pred hhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccc
Q psy11734 317 MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMV 395 (817)
Q Consensus 317 ~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (817)
.+...+...+...+..+ +.+++..|+.|....+|..+++.+.|.+.|..
T Consensus 330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~------------------------------ 379 (491)
T PRK11010 330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAH------------------------------ 379 (491)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh------------------------------
Confidence 33333444455555444 68999999999999999999999999988865
Q ss_pred ccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734 396 APLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
||+..|.+.+++.+.+.++..+.++
T Consensus 380 ---------------G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 380 ---------------GWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred ---------------ChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5899999999999988877766543
No 124
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.79 E-value=3.5e-19 Score=196.62 Aligned_cols=281 Identities=11% Similarity=0.052 Sum_probs=193.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc-----c------------cccCcch
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM-----S------------FTASWAN 63 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~-----~------------~~~gWr~ 63 (817)
+|++.|++ |..++.....+++|||+||||+++|+.....++|..+++++...++ + ...+||.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 37899997 6699999999999999999999999997666677766665554433 1 0345888
Q ss_pred hHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccc
Q psy11734 64 VFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGI 143 (817)
Q Consensus 64 ~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (817)
++++..++.++..++.+++.+|+|+.+.
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~~~~~---------------------------------------------------- 240 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIASSRA---------------------------------------------------- 240 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcccccc----------------------------------------------------
Confidence 8888888888777777776544332100
Q ss_pred cccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHh
Q psy11734 144 LSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIS 223 (817)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~ 223 (817)
.....++++|+|+.|...+.+++.++++.++.
T Consensus 241 ------------------------------------------------~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s 272 (462)
T PRK15034 241 ------------------------------------------------SIADQLPVLQRLHLWLLSLLYLATFGSFIGFS 272 (462)
T ss_pred ------------------------------------------------CHHHHHHHhCCCchhHHHHHHHHHHHHHHHHH
Confidence 01125678999999999999999999999999
Q ss_pred hchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh-hhccCC-
Q psy11734 224 TDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA-ASYVGC- 301 (817)
Q Consensus 224 ~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~- 301 (817)
.++|.|+++.+ +............+.+.+.++++|+++||+|+++. ...+.+.+.++... ....+.
T Consensus 273 ~~lp~~~~~~~--~~~~~l~~~~l~~l~~~l~rplgG~LADRiG~~~v----------l~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 273 AGFAMLAKTQF--PDVNILRLAFFGPFIGAIARSVGGAISDKFGGVRV----------TLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHc--ChHHHHHHHHHHHHHHHHHHHhhHHHHHhcCchHH----------HHHHHHHHHHHHHHHHHHhccc
Confidence 99999998854 43333333444568889999999999999999985 44454444443322 222221
Q ss_pred ---ChhHHHHHHHHHHHHhhhccccccccccccCC----------------------CchhHHHHHHHhhhhhccccccc
Q psy11734 302 ---NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP----------------------NFSGTIMALSNGLGCVSGMVAPL 356 (817)
Q Consensus 302 ---~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p----------------------~~~g~a~g~~~~~~~lg~~~~~~ 356 (817)
+.......+.......|.....+.-.+.+..| ++.|.+.|+.+..+.+|+.+-|.
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~ 420 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQ 420 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhH
Confidence 11222222222223333333333222222222 26889999999999999999999
Q ss_pred ccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 357 TVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 357 i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
+.|...+.+| ++...|+...+..+++.++....+.|
T Consensus 421 ~~g~~~~~~g--------------------------------------------~~~~~~~~~~~~~~~~~~~~w~~y~r 456 (462)
T PRK15034 421 AFGMSLNMTG--------------------------------------------SPVGAMKVFLIFYIVCVLLTWLVYGR 456 (462)
T ss_pred HHHHHHHHcC--------------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9998887765 57888888888888888776665544
Q ss_pred cc
Q psy11734 437 EV 438 (817)
Q Consensus 437 ~~ 438 (817)
+.
T Consensus 457 ~~ 458 (462)
T PRK15034 457 RK 458 (462)
T ss_pred CC
Confidence 43
No 125
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.79 E-value=4.4e-17 Score=181.28 Aligned_cols=369 Identities=13% Similarity=0.052 Sum_probs=234.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhh--hhhHHHHHHHHhhh-HHHHHHHhhcCcccchhhHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLS--ALPFLIMWLVSMSS-SALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~--~~~~i~~~ig~~~~-G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
+......++.++..+......+|.|+++ +|+|..+.|+.. ..+.+...+.+++. ++.+||.||||. .
T Consensus 3 ~~~~~~ly~~~g~~~~~~~p~lp~~l~~-~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~---------~ 72 (390)
T TIGR02718 3 VITLGLLYLSQGIPIGLAMDALPTLLRE-DGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRS---------W 72 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchh---------H
Confidence 4556667777888888888999999998 599999999963 45567777777777 447898888875 1
Q ss_pred HHHHhHHHHHHHHhhhcc--CCC-hhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccc
Q psy11734 282 ATLGAVLPGVGALAASYV--GCN-TSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i 357 (817)
+.....+.......+... ..+ ..+.........++.....+.......+ ..+++++...+.......+|..+++..
T Consensus 73 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~ 152 (390)
T TIGR02718 73 VLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAG 152 (390)
T ss_pred HHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 222222222122222211 111 2222222222222222233333434333 334566777777777667777777777
Q ss_pred cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
.+.+.++. +|+..|++.+++.++..+..+++.+++
T Consensus 153 ~~~l~~~~---------------------------------------------gw~~~f~~~a~l~~~~~~~~~~~~~~~ 187 (390)
T TIGR02718 153 TLVLFGKF---------------------------------------------GQRPAFLLVACVPLASLVCVLWLKDRA 187 (390)
T ss_pred HHHHHHHh---------------------------------------------CHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 77776664 699999999988877666654443321
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734 438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD 517 (817)
Q Consensus 438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (817)
+++ +++ +-
T Consensus 188 ~~~-~~~----------------------------------------------------------------------~~- 195 (390)
T TIGR02718 188 VAS-PEA----------------------------------------------------------------------PL- 195 (390)
T ss_pred cCc-ccc----------------------------------------------------------------------ch-
Confidence 110 000 00
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734 518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA 597 (817)
Q Consensus 518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~ 597 (817)
+ + ..+++
T Consensus 196 ---------------------------------~--------------------~--------------------~~~~~ 202 (390)
T TIGR02718 196 ---------------------------------A--------------------R--------------------RASLF 202 (390)
T ss_pred ---------------------------------h--------------------h--------------------HHHHH
Confidence 0 0 01245
Q ss_pred HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccch
Q psy11734 598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~ 676 (817)
+.+|+|..+......++..........+.|.|++| .|+++++++....... ...+++.+.+|++.||+|+|+.+
T Consensus 203 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l---- 277 (390)
T TIGR02718 203 RFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTF---- 277 (390)
T ss_pred HHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHH----
Confidence 67888888888888888888888888899999988 6999999999888776 46778899999999999987653
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHhh----cCchHHHHHHHHHHHHHHhhhhhhhhhhccc-cCC-CchHHHHHHHHHHHHH
Q psy11734 677 VRKVFATLGAVLPGVGA-LAASYV----GCNTSMVAICFTIGMAFMGFCYASIRVNPID-LSP-NFSGTIMALSNGLGCV 749 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~g~~~g~~~~~~~~ 749 (817)
..+..+.++.. ..+... ..+.........+..+..+...+.......+ ..+ +++++.+++.+...++
T Consensus 278 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 351 (390)
T TIGR02718 278 ------ILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL 351 (390)
T ss_pred ------HHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH
Confidence 23333221211 111111 1122222223333334445555555544433 344 7899999999999999
Q ss_pred HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734 750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF 787 (817)
Q Consensus 750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 787 (817)
|..++|.+.|.+.|..| |+..|...+++.+++.+.
T Consensus 352 g~~~g~~~~G~l~~~~G---~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 352 GELIASSIAGYLTDRFG---YAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 778888877777766544
No 126
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.79 E-value=4.9e-19 Score=199.47 Aligned_cols=268 Identities=13% Similarity=0.121 Sum_probs=179.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|+|.|..++....++.|++|+|+|+++.++...+..+|..+++.+.+.+.+ ..|||+.|++.....++. +
T Consensus 112 ~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~-~~~w~~~f~i~~~~~~~~----~ 186 (426)
T PRK12307 112 SRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAE-AYGWRAAFFVGLLPVLLV----I 186 (426)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcc-cCCHHHHHHHHHHHHHHH----H
Confidence 38999999999999999999999999999999999999999999999999999999 899999999854332221 1
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
++....|+++++ ++++. . +..++.+.+|++
T Consensus 187 ~~~~~~p~~~~~---~~~~~-~------~~~~~~~~~~~~---------------------------------------- 216 (426)
T PRK12307 187 YIRARAPESKEW---EEAKL-S------GKGKHSQSAWSV---------------------------------------- 216 (426)
T ss_pred HHHHHCCCChHH---HHhhh-h------ccccccccchhh----------------------------------------
Confidence 111222332211 00000 0 000000001100
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH---HHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS---EVGHDYGLYLISTDLPKYMSEVIGLS 237 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~---~~~~~~~~~~~~~~~p~~l~~~~g~s 237 (817)
.+.++++++|+|.++..... .++.....+.+..++|.|+++ .|++
T Consensus 217 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~ 264 (426)
T PRK12307 217 -------------------------------FSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFD 264 (426)
T ss_pred -------------------------------hhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC
Confidence 12246788888887644333 223333444567889999987 5999
Q ss_pred ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734 238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (817)
+.+.+.......+++++++++.|++.||+++|+. ...+.++..+....+.....+.......+..+....
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKT----------FSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMAT 334 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHh
Confidence 9999988888999999999999999999998875 555555544444433332222222222222221111
Q ss_pred -hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 318 -GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 318 -g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
....+.......|..| +++|+++|+.+.+..+++.++|.+.|.+.|..
T Consensus 335 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~ 384 (426)
T PRK12307 335 NVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITM 384 (426)
T ss_pred cccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHHHHHcc
Confidence 1112233445566666 78999999999999999999999999988775
No 127
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.79 E-value=1.2e-19 Score=198.65 Aligned_cols=257 Identities=23% Similarity=0.349 Sum_probs=191.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|||++++++......+|..++|.+++.+.+ ..|||+.|++.+++.++..++..
T Consensus 91 ~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~~~~~~~~~~~~~~~~~~il~~ 169 (352)
T PF07690_consen 91 ARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLIS-YFGWRWAFLISAILSLIAAILFI 169 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC-HCHHCCHHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhh-ccccccccccccchhhhhhhhHh
Confidence 37899999999999999999999999999999999999999999999999999998 89999999999998888877655
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
.+++++|++++..++++.+ ++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~------------~~~---------------------------------------------- 191 (352)
T PF07690_consen 170 LFLPEPPPPRERESPKESE------------SKK---------------------------------------------- 191 (352)
T ss_dssp CCC---STTTT--SSTTTT--------------H----------------------------------------------
T ss_pred hhhhhcccccccccccccc------------ccc----------------------------------------------
Confidence 5655544333221111110 000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCch-HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc-c
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTP-WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS-V 238 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s-~ 238 (817)
+++..+ ++.++++|.+|...+..++.....+....+.|.|+++.+|++ .
T Consensus 192 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 242 (352)
T PF07690_consen 192 -----------------------------PKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGP 242 (352)
T ss_dssp -----------------------------HHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTH
T ss_pred -----------------------------ccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHH
Confidence 001112 567788888886677777777788889999999988889999 7
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--CChhHHHHHHHHHHHH
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAIFFTIGMAF 316 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~ 316 (817)
.+.+.......+.+.+++++.|+++||+++|+. .........+....+.... ++..+......+.+.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 312 (352)
T PF07690_consen 243 SQAGLLFSIFGIVGIIGSLLAGRLSDRFGRRRR----------LLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFG 312 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH----------HHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHH----------HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 899999999999999999999999999987653 2233333333333332221 2334444444555556
Q ss_pred hhhccccccccccccCC-CchhHHHHHHHhhhhhcccccc
Q psy11734 317 MGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAP 355 (817)
Q Consensus 317 ~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~ 355 (817)
.+...+.......+..| +++|++.|+.+..+++|+.++|
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 313 FGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 66777777777777665 8999999999999999999886
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.79 E-value=5.4e-19 Score=196.71 Aligned_cols=270 Identities=13% Similarity=0.095 Sum_probs=189.8
Q ss_pred cccccchhhhhhhhccCCCCc--chhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccC
Q psy11734 9 KGTTFPALCTLLAQWSPPNER--SFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFND 86 (817)
Q Consensus 9 ~g~~~~~~~~~i~~~~p~~~r--g~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~ 86 (817)
.+...|...+++.|+.|+++| +...++..++.++|.++||++++.+.+ +.|||+.|++.++..++..+..++++||+
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 197 (393)
T PRK15011 119 GSTANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAM-GFSFTVMYLSAAVAFIVCGVMVWLFLPSM 197 (393)
T ss_pred HHhhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHH-hcChHHHHHHHHHHHHHHHHHHHhhcCcc
Confidence 446788888888998877666 345688899999999999999999999 89999999999988888877777777776
Q ss_pred CCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHh
Q psy11734 87 PKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTL 166 (817)
Q Consensus 87 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (817)
|++++..+ ++ . +.
T Consensus 198 ~~~~~~~~-~~---------~-----~~---------------------------------------------------- 210 (393)
T PRK15011 198 RKELPLAT-GT---------L-----EA---------------------------------------------------- 210 (393)
T ss_pred CCCCcccc-cc---------c-----cc----------------------------------------------------
Confidence 43221100 00 0 00
Q ss_pred hhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc-hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhh
Q psy11734 167 LTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS-LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLS 245 (817)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~ 245 (817)
. .++ +..+.............+.+..+.|.|+++.+|++..+++.+.
T Consensus 211 -----------------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~ 258 (393)
T PRK15011 211 -----------------------------P---RRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMM 258 (393)
T ss_pred -----------------------------c---ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHH
Confidence 0 001 1122222333333445555667899999988899999999888
Q ss_pred hhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccc
Q psy11734 246 ALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIR 325 (817)
Q Consensus 246 ~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~ 325 (817)
....++.+++.++.|+++||+++|+. ...+.....+.+...... ++.........+..+..+...+...
T Consensus 259 ~~~~~~~i~~~~~~G~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~l~~~~~g~~~~~~~ 327 (393)
T PRK15011 259 GTAAGLEIPTMLIAGYFAKRLGKRFL----------MRVAAVAGVCFYAGMLMA-HSPAILLGLQLLNAIYIGILGGIGM 327 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888999999999999999874 334444333333333322 2333333333434444444444445
Q ss_pred ccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccccccccc
Q psy11734 326 VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 405 (817)
Q Consensus 326 ~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (817)
....|..|+++++++++.+...++|.+++|.+.|.+.|..
T Consensus 328 ~~~~~~~p~~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~---------------------------------------- 367 (393)
T PRK15011 328 LYFQDLMPGQAGSATTLYTNTSRVGWIIAGSLAGIVAEIW---------------------------------------- 367 (393)
T ss_pred HHHHHhCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------------------
Confidence 5667888888999999999999999999999999988764
Q ss_pred CCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 406 NKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 406 ~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
+|+..|++.+++.+++.+..++.+
T Consensus 368 -----g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 368 -----NYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHhhc
Confidence 689999988888888887776653
No 129
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.79 E-value=5.5e-19 Score=202.28 Aligned_cols=282 Identities=12% Similarity=0.129 Sum_probs=173.1
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhc--------ccccCcchhHHHHhhhH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIM--------SFTASWANVFYIFGAIA 72 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~--------~~~~gWr~~f~i~~~~~ 72 (817)
.|+++|++.|+..|...++++|++|+|||++++++.+.+..+|..+++.+++.+. + ..|||++|++.+++.
T Consensus 126 ~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~~gWr~~f~~~~~~~ 204 (479)
T PRK10077 126 YRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLN-TDGWRYMFASEAIPA 204 (479)
T ss_pred HHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccc-cCChHHHHHHHHHHH
Confidence 3899999999999999999999999999999999999999999999988776553 3 579999999988877
Q ss_pred HHHHhhhhheeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCc
Q psy11734 73 VLWFAFWCILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGK 151 (817)
Q Consensus 73 ~i~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (817)
++..+. .+++||+|+... ..+.++.....++.......++ ..++
T Consensus 205 ~~~~~~-~~~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~---~~~~------------------------------- 249 (479)
T PRK10077 205 LLFLML-LYFVPETPRYLMSRGKQEQAEGILRKIMGNTLATQ---ALQE------------------------------- 249 (479)
T ss_pred HHHHHH-HHcCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHH---HHHH-------------------------------
Confidence 776544 555676653210 0011111111111000000000 0000
Q ss_pred cchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhc--hh-HHHHHHHHHHHHHHHHHHhhchhh
Q psy11734 152 HTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYS--LP-VWSLIISEVGHDYGLYLISTDLPK 228 (817)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~i~~~~~~~~~~~~~~~~p~ 228 (817)
.+...+++....+..+.. .. +.......+......+...++.|.
T Consensus 250 ---------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 296 (479)
T PRK10077 250 ---------------------------------IKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPE 296 (479)
T ss_pred ---------------------------------HHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 000000000000011110 00 111112222233344556677788
Q ss_pred HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc--CCC-hhH
Q psy11734 229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV--GCN-TSM 305 (817)
Q Consensus 229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~ 305 (817)
++++ .|++..+.++...+.++..+++.+++|+++||++||+. ...+..+..++...+... .+. ...
T Consensus 297 i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~----------~i~~~~~~~v~~~~l~~~~~~~~~~~~ 365 (479)
T PRK10077 297 IFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPL----------QIIGALGMAIGMFSLGTAFYTQAPGIV 365 (479)
T ss_pred HHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHH----------HHHhHHHHHHHHHHHHHHHhcCcccHH
Confidence 7776 68988888888888899999999999999999999875 566666666655554322 111 112
Q ss_pred HHHHHHHHHHHhhh-ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 306 VAIFFTIGMAFMGF-CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 306 ~~~~~~l~~~~~g~-~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
....+....++.+. ..+.......|..| ++|+++.|+.+..+++++.+++.+.+.+.
T Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~ 424 (479)
T PRK10077 366 ALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMD 424 (479)
T ss_pred HHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 22222222222222 23455677787766 78999999999999999999988776544
No 130
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.78 E-value=8.8e-16 Score=173.06 Aligned_cols=444 Identities=16% Similarity=0.112 Sum_probs=269.9
Q ss_pred hhchhHHHHHHHHHHHHHHHHHH----hhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734 200 LYSLPVWSLIISEVGHDYGLYLI----STDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT 275 (817)
Q Consensus 200 ~~~~~~~~~~i~~~~~~~~~~~~----~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~ 275 (817)
+++|+++..+....+.....|.. ...+|...++ .|-+ .+..++.....++..+..++.|+++|.+|||..
T Consensus 37 ~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~---- 110 (599)
T PF06609_consen 37 YRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYF---- 110 (599)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHH----
Confidence 45566665555444433333332 3334545555 4654 566777788899999999999999999999986
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccc
Q psy11734 276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVA 354 (817)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~ 354 (817)
...+.++..++.+...... +....+....+.+.+.+.... .....+|+.| |.|..+.++...........+
T Consensus 111 ------~i~g~~l~vvG~Iv~atA~-~~~~~iag~~l~GvgaG~~~~-~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~ 182 (599)
T PF06609_consen 111 ------FIIGSLLGVVGSIVCATAQ-NMNTFIAGMVLYGVGAGVQEL-AALAISELVPNKWRGLGLAIASIPFIITTWIS 182 (599)
T ss_pred ------HHHHHHHHHhHHHHhhcCC-cHHHHHHHHHHHHHhhHHHHH-HHHHHHHhcccchhhhHhHHHHHHHHhhhccc
Confidence 8888888889988887765 433444444444444444433 3444667666 789887776654433333344
Q ss_pred ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
+.+...+.. ..+||+.|++.++...++.++..+++
T Consensus 183 ~~ia~~~~~---------------------------------------------~~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 183 PLIAQLFAA---------------------------------------------HSGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred HHHHHHhcc---------------------------------------------CCCcchHHHHHHHHHHHHHHHHHHHh
Confidence 444332211 13799999999998888877666665
Q ss_pred ccccccc--cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccc
Q psy11734 435 SGEVQYW--NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTL 512 (817)
Q Consensus 435 ~~~~~~~--~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (817)
+.++.++ .++.++ +.. .+
T Consensus 218 ~PP~~~~~~~~~~s~-~~~--------------------------l~--------------------------------- 237 (599)
T PF06609_consen 218 FPPPRAQLHGRKLSK-REQ--------------------------LK--------------------------------- 237 (599)
T ss_pred CCCchhhhccccCcH-HHH--------------------------HH---------------------------------
Confidence 4433221 111111 100 01
Q ss_pred cccccCChhhHHHHHHHHHHHHHHhhhhchhhc--cccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhc
Q psy11734 513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILS--QKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGE 590 (817)
Q Consensus 513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~--Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~ 590 (817)
++ +-+|.......+...+..+-+|--. ++-..| +++.++.+...+.....-+ .+ +.
T Consensus 238 --~l----D~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~---VIa~lviG~~~Lv~F~~wE-~~------------~~ 295 (599)
T PF06609_consen 238 --EL----DWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAH---VIAPLVIGFVLLVAFVVWE-WF------------GA 295 (599)
T ss_pred --Hh----hHHHHHHHHHHHHHHHHHHhccCCCCCCCCCcc---chhhHHHHHHHHHHHHHhh-hh------------cc
Confidence 22 2244444444444444444433321 222222 2333333333222211110 00 00
Q ss_pred ccCchh--HHhhcC-HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh---HHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 591 DLETPW--AAILSS-LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA---ENGVLSALPFLIMWLVSMSSSALAD 664 (817)
Q Consensus 591 ~~~~~~--~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~---~~~~~~~~~~~~~~ig~~~~g~l~d 664 (817)
.++|+ .+++|+ |.+...++..++....++....+.|......++-|+. +.++......++..+|..+.|.+..
T Consensus 296 -~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~ 374 (599)
T PF06609_consen 296 -PKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFS 374 (599)
T ss_pred -CCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHH
Confidence 12332 578887 4566666777788788899999999999888776653 5677778888999999999999999
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHH
Q psy11734 665 YLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMAL 742 (817)
Q Consensus 665 r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~ 742 (817)
|++|-| +.++.+.+++.+++-.+... +++........++.+++.+....+..+..+-..| ++.|+++|+
T Consensus 375 ~ir~~K---------w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL 445 (599)
T PF06609_consen 375 KIRHIK---------WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGL 445 (599)
T ss_pred Hccchh---------HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHH
Confidence 887643 34455665655544444433 3344444555556666666555555555555666 789999999
Q ss_pred HHHHHHHHHhHHHHHHHHhhcCC----------------c----------------------------------------
Q psy11734 743 SNGLGCVSGMVAPLTVGFLTQNK----------------T---------------------------------------- 766 (817)
Q Consensus 743 ~~~~~~~g~~i~p~~~g~~~~~~----------------g---------------------------------------- 766 (817)
...++.+|+.++..+...+..+. |
T Consensus 446 ~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~ 525 (599)
T PF06609_consen 446 TGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQ 525 (599)
T ss_pred HHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHH
Confidence 99999999999998886655421 0
Q ss_pred ---cccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 767 ---LLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 767 ---~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
..+|+.+|+....+..++.+..++.+..
T Consensus 526 ~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~ 556 (599)
T PF06609_consen 526 EAYAHAYRYVYYSSIAFGVVAIIAALFLGDI 556 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 0247888998888888888888887543
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.78 E-value=1.7e-18 Score=193.37 Aligned_cols=277 Identities=12% Similarity=0.038 Sum_probs=191.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|+|.+...+...+++.|++|+|||++++++...+..+|.++|+++++.+.+ ..|||+.|++..++.++.....
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~-~~g~~~~~~~~~~~~~~~~~~~- 195 (399)
T PRK05122 118 GRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYH-WGGLAGLGLLIMLLALLGLLLA- 195 (399)
T ss_pred HHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHH-cccHHHHHHHHHHHHHHHHHHH-
Confidence 38899999999999999999999999999999999999999999999999999999 8999999988765544332221
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
++.|++++. + ++
T Consensus 196 ---~~~~~~~~~-~-~~--------------------------------------------------------------- 207 (399)
T PRK05122 196 ---RPRPAVPPV-K-GE--------------------------------------------------------------- 207 (399)
T ss_pred ---hcCCCCCCC-C-cc---------------------------------------------------------------
Confidence 222221110 0 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+.++++.+|+ ++.......+....+.....+.|.|+++ +|. .+
T Consensus 208 --------------------------------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~ 250 (399)
T PRK05122 208 --------------------------------RLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGW--DG 250 (399)
T ss_pred --------------------------------chhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-ccc--cc
Confidence 0011122221 1111222233344556667788888876 465 35
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.+.......++..+++++.|++.||+++|+. ...+..+..++...+...+ +.+...+...+.+++.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~G~~~~~~ 319 (399)
T PRK05122 251 AALALTLFGVAFVGARLLFGNLINRLGGLRV----------AIVSLLVEILGLLLLWLAP-SPWMALIGAALTGFGFSLV 319 (399)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHhHHHH
Confidence 5666777888999999999999999998774 5555555555555554443 4444444444444444444
Q ss_pred cccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 321 YASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 321 ~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
.+.......+ .+++++|+++|+.+....+|..+++.+.|.+.|..
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~---------------------------------- 365 (399)
T PRK05122 320 FPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWF---------------------------------- 365 (399)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc----------------------------------
Confidence 4444333444 55589999999999999999999999999887764
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
+|+..|++.+++.+++.++..++.++++++
T Consensus 366 -----------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (399)
T PRK05122 366 -----------GYPSIFLAAALAALLGLALTWLLYRRAPRA 395 (399)
T ss_pred -----------CHHHHHHHHHHHHHHHHHHHHHhccccccc
Confidence 599999999988888887776665554433
No 132
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.77 E-value=5.3e-17 Score=169.44 Aligned_cols=287 Identities=17% Similarity=0.165 Sum_probs=228.3
Q ss_pred HHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHH
Q psy11734 451 VLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAF 530 (817)
Q Consensus 451 ~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~ 530 (817)
...+.++..+++-.+......+.+|.+.+ .||++..|.+++...|
T Consensus 13 ~~~v~~t~lFfl~G~~~~l~diLip~l~~-----------------------------------~f~ls~~~a~liqfaf 57 (422)
T COG0738 13 LAFVLLTSLFFLWGFITCLNDILIPHLKE-----------------------------------VFDLTYFEASLIQFAF 57 (422)
T ss_pred eHHHHHHHHHHHHHHHhhcchhhHHHHHH-----------------------------------HhCccHHHHHHHHHHH
Confidence 34556666667777777777888877777 9999999999999999
Q ss_pred HHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHh-hhcchHHHHHHHHHHhhhcc------------------
Q psy11734 531 YYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLI-AHSGPVSMTVLRFLEGVGED------------------ 591 (817)
Q Consensus 531 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a-~~~s~~~l~~~R~l~Gig~~------------------ 591 (817)
+.+|.+++++.|++.+|+|+|+.++.++.+++++..+..=+ ...++..++.+-++.|.|.+
T Consensus 58 f~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~ 137 (422)
T COG0738 58 FGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPES 137 (422)
T ss_pred HHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchh
Confidence 99999999999999999999999999999999999998532 23378889999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 138 a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~ 217 (422)
T COG0738 138 AAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA 217 (422)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc
Confidence
Q ss_pred -----cCc--hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 592 -----LET--PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALAD 664 (817)
Q Consensus 592 -----~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d 664 (817)
++. ...+++|+|+++...+..+++........+|++.|+.+..|.+..+++...+.+..+.++|++++.++..
T Consensus 218 ~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~ 297 (422)
T COG0738 218 APSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMS 297 (422)
T ss_pred cccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 3567899999999999999999999999999999999988999999999999999999999999999999
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHH
Q psy11734 665 YLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSN 744 (817)
Q Consensus 665 r~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 744 (817)
|+...+.+ ....++..+.++...+.+ + ...+......+++++..+|..++...+..|++...+.++ -
T Consensus 298 ~~~~~k~L----------af~a~~~ill~~~~~l~~-g-~v~~~~l~~ig~F~simfPTIfslal~~l~~~ts~~s~~-l 364 (422)
T COG0738 298 RIKPEKYL----------AFYALIAILLLLAVALIG-G-VVALYALFLIGLFNSIMFPTIFSLALKNLGEHTSVGSGL-L 364 (422)
T ss_pred HhCHHHHH----------HHHHHHHHHHHHHHHHhc-C-hHHHHHHHHHHHHhHHHHHHHHHHHHhccCcccccccee-e
Confidence 99876643 233333334444444443 3 555666667788888899999988888888555555554 4
Q ss_pred HHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHH
Q psy11734 745 GLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFF 788 (817)
Q Consensus 745 ~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~ 788 (817)
.+...|+++.|.+.|++.|..+ -...+......+.+..+.+
T Consensus 365 ~maivGGAiiP~l~G~i~d~~g---~~~~~~~~pllc~lyV~~~ 405 (422)
T COG0738 365 VMAIVGGAIIPPLQGVIADMFG---IQLTFLIVPLLCYLYVLFF 405 (422)
T ss_pred eeheecchHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHH
Confidence 5678899999999999999986 3444444444555444333
No 133
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.77 E-value=1.5e-18 Score=193.21 Aligned_cols=255 Identities=13% Similarity=0.076 Sum_probs=179.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|+|++++|+......+|..+||.+++++.+ .|||+.|++.+++.++..++..
T Consensus 105 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~~--~g~~~~f~~~~~~~~~~~i~~~ 182 (400)
T PRK11646 105 SCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLLQ--YDFRLVCATGAVLFVLAAAFNA 182 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hhHHHHHHHHHHHHHHHHHHHH
Confidence 37889999998899999999999999999999999999999999999999999886 6999999998877776655555
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
++.|++++++ +++ +
T Consensus 183 ~~~~~~~~~~------~~~-------~----------------------------------------------------- 196 (400)
T PRK11646 183 WLLPAYKLST------VRT-------P----------------------------------------------------- 196 (400)
T ss_pred HhCCcccccc------cch-------h-----------------------------------------------------
Confidence 5444321100 000 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
.+.+++++++||.++...+..+...........++|.|+++. +.++.+
T Consensus 197 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~ 244 (400)
T PRK11646 197 -------------------------------VREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDI-AGSPSA 244 (400)
T ss_pred -------------------------------hHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhh-cCCchH
Confidence 012356778888887666555554444444567899999885 447788
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
.+.+.....++...+....+++.|| .+.++. ...+..+..++...+...+ +.........+.+.+.+.
T Consensus 245 ~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~~~----------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~l~~~g~~~ 313 (400)
T PRK11646 245 VKWMYAIEACLSLTLLYPIARWSEKRFRLEHR----------LMAGLLIMSLSMFPIGMVS-NLQQLFTLICLFYIGSII 313 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcchhHH----------HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHH
Confidence 8888777777666665555666655 433332 4455555555555554443 333333333334444445
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
..+.......+..| +++|++.|+.+....+|+++||.+.|.+.|+.+
T Consensus 314 ~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 314 AEPARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HHccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHHHHHHHh
Confidence 55555666666555 899999999999999999999999999998864
No 134
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.77 E-value=2.1e-18 Score=190.03 Aligned_cols=257 Identities=15% Similarity=0.163 Sum_probs=179.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc---------cccCcchhH-HHHhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS---------FTASWANVF-YIFGA 70 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~---------~~~gWr~~f-~i~~~ 70 (817)
.|+++|++.+ .++...++++|++|+|||++++++......+|..+++.+++.+.+ ...+||+.| ++.++
T Consensus 97 ~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~ 175 (366)
T TIGR00886 97 LRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAG 175 (366)
T ss_pred HHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHH
Confidence 3789999866 566788999999999999999999998888888877777766654 024899999 44466
Q ss_pred hHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCC
Q psy11734 71 IAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGG 150 (817)
Q Consensus 71 ~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (817)
+..+..++.+.+.+|+|++++. +++.+. .. .+. ..
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----~~----~~~----~~------------------------------ 210 (366)
T TIGR00886 176 ILLLPALLIFFVGADTPPGKPA---TGKLSF----KG----ARW----SV------------------------------ 210 (366)
T ss_pred HHHHHHHHHHHhcccCCccccc---chhccc----cc----ccc----cc------------------------------
Confidence 6666656666666665533211 000000 00 000 00
Q ss_pred ccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 151 KHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
+++...+.++++++|+++...+..++.....+.+..+.|.|+
T Consensus 211 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (366)
T TIGR00886 211 --------------------------------------GTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFF 252 (366)
T ss_pred --------------------------------------cchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000111356788999999888888888888888999999999
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc--cCC-ChhHHH
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY--VGC-NTSMVA 307 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~ 307 (817)
++.+|+++.+++.+.....+.+.++++++|+++||+++|+. ...+......+...+.. ..+ +.....
T Consensus 253 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (366)
T TIGR00886 253 KDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGARK----------LLMSFLGVAMGAFLVVLGLVSPLSLAVFI 322 (366)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccchh----------HHHHHHHHHHHHHHHHhcCCCcchHHHHH
Confidence 99899999999998999999999999999999999999874 33333333333333322 221 333334
Q ss_pred HHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcc
Q psy11734 308 IFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSG 351 (817)
Q Consensus 308 ~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~ 351 (817)
........+.+...+.......+..|+++|+++|+.+..+++|+
T Consensus 323 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 323 VLFVALFFFSGAGNGSTFALVPHIFRRATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHHHHHhccccchhhhcchhhchhhcccHHHHHHHhccCCC
Confidence 44444555666666666777778889999999999999998774
No 135
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.77 E-value=1.2e-16 Score=202.69 Aligned_cols=391 Identities=14% Similarity=0.065 Sum_probs=250.9
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc--ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734 198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA--ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT 275 (817)
Q Consensus 198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~--~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~ 275 (817)
..++++.+...++..++...........+..++...++.+.. ..+++.....++..++++++|+++||+|||+.
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~---- 79 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRV---- 79 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHH----
Confidence 467888888888777776666655555555555544555433 35777778889999999999999999999985
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhc--cCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccc
Q psy11734 276 NVRKVFATLGAVLPGVGALAASY--VGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGM 352 (817)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~ 352 (817)
+..+.++..+..++... ..++.+...+..++.+.+.+...+....++.+..| ++|+.++|+.+....+|.+
T Consensus 80 ------l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~ 153 (1146)
T PRK08633 80 ------IRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAIL 153 (1146)
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHH
Confidence 44444433332222221 12244555555555666666677777777778665 7899999999999999999
Q ss_pred ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHH-HHHHHhhhhhe
Q psy11734 353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMF-LALVISNVFFV 431 (817)
Q Consensus 353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~-~~~~~~~~~~~ 431 (817)
+|+.+++.+.+..+.-. .+. ..++.+.+.+.+ ...+++.++.+
T Consensus 154 lg~~l~~~l~~~~~~~~-----------------------------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 197 (1146)
T PRK08633 154 AGTALFSFLFESVNGNT-----------------------------------PSE-ILGRIAPAGLVLLAVAVLGLIFAY 197 (1146)
T ss_pred HHHHHHHHHHHhhcccc-----------------------------------ccc-cccchHHHHHHHHHHHHHHHHHHh
Confidence 99999998876521000 000 012333333222 22233333333
Q ss_pred eecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734 432 LFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT 511 (817)
Q Consensus 432 ~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (817)
.++ +.++....+. + +
T Consensus 198 ~~~-~~~~~~~~~~---------------------------------~---------------------------~---- 212 (1146)
T PRK08633 198 RLP-KVPAAAPEVF---------------------------------D---------------------------K---- 212 (1146)
T ss_pred cCc-CCCCCCcccc---------------------------------c---------------------------c----
Confidence 332 2111000000 0 0
Q ss_pred ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
.+.. ...+ .
T Consensus 213 --~~~~-~~~~-----------------------------------------------~--------------------- 221 (1146)
T PRK08633 213 --KKYL-FPKL-----------------------------------------------L--------------------- 221 (1146)
T ss_pred --cccc-cHHH-----------------------------------------------H---------------------
Confidence 0000 0000 0
Q ss_pred cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh-HHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734 592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA-ENGVLSALPFLIMWLVSMSSSALADYLIVRD 670 (817)
Q Consensus 592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 670 (817)
...++.++++|.++...+..++.....+.+..++|.|+++.+|.+.. +.+++.+...++.+++.++.|+++||+++++
T Consensus 222 -~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~ 300 (1146)
T PRK08633 222 -WRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELG 300 (1146)
T ss_pred -HHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEcc
Confidence 01234567788888887777777777788888999999999999998 9999999999999999999999999999876
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHH
Q psy11734 671 ILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCV 749 (817)
Q Consensus 671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 749 (817)
.+ .++.++.+++++++.+.. +.+..++..++.+++.++..+...+...+..| +.||+++|+.+.+.++
T Consensus 301 ~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l 369 (1146)
T PRK08633 301 LV----------PLGALGLALSLFLLPTAP-SLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV 369 (1146)
T ss_pred ch----------hHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH
Confidence 54 245555555555555543 44555555555666666666666777777777 7899999999999999
Q ss_pred HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHH
Q psy11734 750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFIS 784 (817)
Q Consensus 750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~ 784 (817)
++.+++.+.+.+... + .++...+++.+.+.++.
T Consensus 370 g~~~~~~~~~~l~~~-~-~~~~~~~~~~~~~~~~~ 402 (1146)
T PRK08633 370 GMLLFLALTTLFSGL-G-LSPAGLFYLIALVTLIG 402 (1146)
T ss_pred HHHHHHHHHHHHHHh-c-cCHHHHHHHHHHHHHHH
Confidence 998888887766542 2 12445555555544443
No 136
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.77 E-value=3.2e-17 Score=183.12 Aligned_cols=347 Identities=16% Similarity=0.107 Sum_probs=219.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734 203 LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA 282 (817)
Q Consensus 203 ~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~ 282 (817)
+.+....+..++.....+......|.+. +.+|.|..+.++..+...++..+++++.|+++||+|||+. +
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~----------~ 80 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLP----------M 80 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------H
Confidence 3455666777777777777777777655 4589999999999999999999999999999999999986 6
Q ss_pred HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734 283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
..+..+.+++.....+.+ +.........+.+.+.+...+.......|..| ++|++++++.+....+|..+++.+.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l 159 (405)
T TIGR00891 81 VTSIVLFSAGTLACGFAP-GYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLV 159 (405)
T ss_pred HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 666666666666655544 55555555555555555666666666666555 8999999999999999999999988877
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY- 440 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~- 440 (817)
.+..+ .+|+..|++.++..++..+.....+++++.+
T Consensus 160 ~~~~~-------------------------------------------~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (405)
T TIGR00891 160 VPVWG-------------------------------------------DGWRALFFISILPIIFALWLRKNIPEAEDWKE 196 (405)
T ss_pred HHhcC-------------------------------------------ccHHHHHHHHHHHHHHHHHHHHhCCCChhHHH
Confidence 65431 1599999887766666555444443321100
Q ss_pred --cc-CCC----------C------------------chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCC
Q psy11734 441 --WN-ESI----------L------------------PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFV 489 (817)
Q Consensus 441 --~~-~~~----------~------------------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (817)
.+ +.. . +.+|........................|...
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 265 (405)
T TIGR00891 197 KHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYL----------- 265 (405)
T ss_pred HhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH-----------
Confidence 00 000 0 01111111111222111111122222223222
Q ss_pred CCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH-
Q psy11734 490 NTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT- 568 (817)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~- 568 (817)
.+++|+++.+.+++.+.+.++..++.++.|++.||+|||+.+.++.++.++..+..
T Consensus 266 -----------------------~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 322 (405)
T TIGR00891 266 -----------------------KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVF 322 (405)
T ss_pred -----------------------HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHH
Confidence 22789999999999999999999999999999999999999888776553332221
Q ss_pred HHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCC--hhHHHHHHH
Q psy11734 569 PLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLS--VAENGVLSA 646 (817)
Q Consensus 569 ~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s--~~~~~~~~~ 646 (817)
...+ +.+ ...+..++......+.....+.+..+...-+ ....+....
T Consensus 323 ~~~~--~~~-----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 371 (405)
T TIGR00891 323 AIGA--NVA-----------------------------VLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQ 371 (405)
T ss_pred HhCC--chH-----------------------------HHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHH
Confidence 1111 111 1112112222222222233444555432211 122444556
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 647 LPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 647 ~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
...+++.++.++.|.+.|+.|..
T Consensus 372 ~~~~g~~~g~~~~g~l~~~~g~~ 394 (405)
T TIGR00891 372 LGNLGGALAPIIGALLAQRLDEY 394 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhcccc
Confidence 67788999999999999999854
No 137
>TIGR00895 2A0115 benzoate transport.
Probab=99.77 E-value=2.6e-18 Score=191.23 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=189.2
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+...+...+++.|++|+++|++++++...+..+|..+++.+++++.+ ..|||+.|++.+.+.++..++.+.
T Consensus 112 ~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~ 190 (398)
T TIGR00895 112 RFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIP-VFGWRSLFYVGGIAPLLLLLLLMR 190 (398)
T ss_pred HHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhh-cccceeehhhhhhHHHHHHHHHHH
Confidence 7889999999999999999999999999999999999999999999999999999 899999999987777777666666
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
++|++|+.....++++..+..++.......++++...++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------------- 229 (398)
T TIGR00895 191 FLPESIDFLVSKRPETVRRIVNAIAPQMQAEAQSALPEQ----------------------------------------- 229 (398)
T ss_pred hCCCCChHHHhcCHHHHHHHHHHHHHhcccccccccccc-----------------------------------------
Confidence 677654321111111111111111000000000000000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh---chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY---SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV 238 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 238 (817)
+..++..+...+.+++ ++..+...+..++.....+....|.| ++.+.+|+++
T Consensus 230 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~~~ 284 (398)
T TIGR00895 230 ------------------------KATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLP-KLMVELGFSL 284 (398)
T ss_pred ------------------------ccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHcCCCH
Confidence 0000001111222333 23445555566666777788888899 4445589999
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhh
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMG 318 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g 318 (817)
.+++.......+++.+++++.|+++||+++|+ ......+..+....+....++.........+.+.+.+
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 353 (398)
T TIGR00895 285 SLAATGGALFNFGGVIGSIIFGWLADRLGPRV-----------TALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVN 353 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHH-----------HHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999874 2233333333222222222244444444455555555
Q ss_pred hccccccccccccCC-CchhHHHHHHHhhhhhccccccccccee
Q psy11734 319 FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 319 ~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
...+.......+..| ++|+++.|+.+.+..+|++++|.+.|.+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 354 GGQSGLYALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 666666777777666 7999999999999999999999998865
No 138
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.77 E-value=8.3e-19 Score=204.97 Aligned_cols=335 Identities=14% Similarity=0.123 Sum_probs=205.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------------cccCcchhHHHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS------------FTASWANVFYIF 68 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------------~~~gWr~~f~i~ 68 (817)
+|+++|+|.|+..|...+++.|++|+++|+++++++.+...+|.++++.++..+.+ ...+||+.|++.
T Consensus 261 ~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~ 340 (742)
T TIGR01299 261 CRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVC 340 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999988876654 024689999987
Q ss_pred hhhHHHHHhhhhheeccCCCCCCCCC----HHHHhHhhhhccccccccc----cccccCccccchhhhhhhhchhhcccc
Q psy11734 69 GAIAVLWFAFWCILCFNDPKSHPYIS----EKERKYLLDSIGAAERRKD----AKFDWDERTQGVILSSFYYGYTLTHIP 140 (817)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (817)
+++.++. ++..+++||.| ++.. .++......++.....+.. ..+..++. ... .
T Consensus 341 ~lp~ll~-ll~~~~lPESP---rwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~--------------~~~-~ 401 (742)
T TIGR01299 341 AFPCVFA-IGALTFMPESP---RFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHI--------------KTI-H 401 (742)
T ss_pred HHHHHHH-HHHHHHcCCCH---HHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHH--------------HHh-h
Confidence 7665554 44455565554 3321 1111111111111000000 00000000 000 0
Q ss_pred ccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchh-hhHHhhhccCcccCchHHHHhhch---hHHHHHHHHHHHH
Q psy11734 141 GGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSM-TVLRFLEGVGEDLKTPWAAILYSL---PVWSLIISEVGHD 216 (817)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~i~~~~~~ 216 (817)
. .|.. .......+...- ...+ ..........+++++|+.| ..+.+.+..++..
T Consensus 402 ~---~~~~-------------------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~ 458 (742)
T TIGR01299 402 Q---EDEL-------------------IEIESDTGTWYQRCFVR-ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLS 458 (742)
T ss_pred h---hhhh-------------------hcccccccchhhcchhh-hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHH
Confidence 0 0000 000000000000 0000 0000000011344555543 3577888888899
Q ss_pred HHHHHHhhchhhHHHHh----h-----------------CCccc------------------------------------
Q psy11734 217 YGLYLISTDLPKYMSEV----I-----------------GLSVA------------------------------------ 239 (817)
Q Consensus 217 ~~~~~~~~~~p~~l~~~----~-----------------g~s~~------------------------------------ 239 (817)
+++|++..|+|.++.+. + +++.+
T Consensus 459 ~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 538 (742)
T TIGR01299 459 FGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDD 538 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccccccccceee
Confidence 99999999999886541 0 00000
Q ss_pred ---------------------------------------------------------ccchhhhhhHHHHHHHHhhhHHH
Q psy11734 240 ---------------------------------------------------------ENGVLSALPFLIMWLVSMSSSAL 262 (817)
Q Consensus 240 ---------------------------------------------------------~ag~~~~~~~i~~~ig~~~~G~l 262 (817)
..........++.+++.+++|++
T Consensus 539 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L 618 (742)
T TIGR01299 539 VTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALL 618 (742)
T ss_pred ccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01223445668889999999999
Q ss_pred HHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHH
Q psy11734 263 ADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMA 341 (817)
Q Consensus 263 ~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g 341 (817)
+||+|||+. +..+.++.+++.+++.+.. +....++..++.+++.+...+...++..|+.| ++|++++|
T Consensus 619 ~Dr~GRr~~----------l~~~~~lsai~~ll~~~~~-s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta~G 687 (742)
T TIGR01299 619 MDKIGRLRM----------LAGSMVLSCISCFFLSFGN-SESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATAFG 687 (742)
T ss_pred HHHhCCHHH----------HHHHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999986 6777777777766666554 33333333444444455555666778888877 78999999
Q ss_pred HHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHH
Q psy11734 342 LSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFL 421 (817)
Q Consensus 342 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~ 421 (817)
+.+....+|++++|.+.+.+.+. .....|++.++
T Consensus 688 i~~~~~rlGaiigp~i~g~L~~~----------------------------------------------~~~~pf~i~a~ 721 (742)
T TIGR01299 688 FLNALCKAAAVLGILIFGSFVGI----------------------------------------------TKAAPILFASA 721 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----------------------------------------------hhHHHHHHHHH
Confidence 99999999999999998877653 24567777877
Q ss_pred HHHHhhhhheeec
Q psy11734 422 ALVISNVFFVLFG 434 (817)
Q Consensus 422 ~~~~~~~~~~~~~ 434 (817)
+.++++++.++++
T Consensus 722 ~lll~~ll~~~LP 734 (742)
T TIGR01299 722 ALACGGLLALKLP 734 (742)
T ss_pred HHHHHHHHHHhCC
Confidence 7777777766664
No 139
>KOG2533|consensus
Probab=99.76 E-value=2.6e-17 Score=183.41 Aligned_cols=273 Identities=19% Similarity=0.144 Sum_probs=201.6
Q ss_pred CCCCchhHHHHHHHHHHHHHHHhhhhhccEEE-EeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 443 ESILPARYVLGIMGCMGVTLALMMRSCLATAI-TEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 443 ~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
+..+|.+.+++..++..++..+.|+..++.+. -.+.+ |.|+..+
T Consensus 37 ~l~~K~dl~i~~~~~~~y~~~~~d~~si~~a~l~g~~e-----------------------------------dl~~~~~ 81 (495)
T KOG2533|consen 37 KLLRKLDLFILPFLCYLYFHAYLDKSSIVNASLSGLKE-----------------------------------DLKLVGN 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchhcchhHHHcCCcc-----------------------------------ccchhhh
Confidence 34466677778888888899999998776532 22334 9999999
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------- 591 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------- 591 (817)
+.+.+.++|.++|+++++++|.+.||++..+.+....+.+++..+++...+ |++.+++.|++.|+.++
T Consensus 82 ~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~--s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 82 QLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVH--SFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 999999999999999999999999999999999999999999999999988 99999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~ 239 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTD 239 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccch
Confidence
Q ss_pred ----------------------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH
Q psy11734 592 ----------------------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF 649 (817)
Q Consensus 592 ----------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~ 649 (817)
++..+++.+++|++|...+..++.....+++.+|+|.|+++..|+|..++..+..+..
T Consensus 240 ~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~ 319 (495)
T KOG2533|consen 240 EEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYD 319 (495)
T ss_pred HHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHHhccccchHH
Confidence 1123467889999999999999999999999999999999966799999999999999
Q ss_pred HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhcc
Q psy11734 650 LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPI 729 (817)
Q Consensus 650 ~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (817)
++++++.++.|+++||.+.- ...|..+....++...++...+.... ....................+......+
T Consensus 320 ~~g~v~~i~ag~lsdr~~~~-----~~~~~~~~~~~~~~~~~g~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~w~s 393 (495)
T KOG2533|consen 320 VGGIVGLILAGYLSDRLKTI-----FARRLLFIVFLCLYAIIGAISLLAAA-VLPGAYGAFLIGPYGLIATAIIALSWTS 393 (495)
T ss_pred hhhHHHHHHHHHHHHHHhhh-----HHHHHHHHHHHHHHHHHHHHHHHhhc-cchHHhHHHHhcchhhHHHHHHHHhhcc
Confidence 99999999999999996410 01122233344444444544444432 2333333333333333333333333333
Q ss_pred c-cCCC-chHHHHHHHHHHHHHHHhHHHHHH
Q psy11734 730 D-LSPN-FSGTIMALSNGLGCVSGMVAPLTV 758 (817)
Q Consensus 730 ~-~~~~-~~g~~~g~~~~~~~~g~~i~p~~~ 758 (817)
+ ..++ .+-+..+......+.++.++|.+.
T Consensus 394 ~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~ 424 (495)
T KOG2533|consen 394 ANLAGNTKALTTVSAIIDGTGSAGAISGQLF 424 (495)
T ss_pred ccccchHHhHHHHhhhhcchhHHHHhhhhhc
Confidence 3 3443 344445555555555666555553
No 140
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.76 E-value=2.6e-18 Score=192.09 Aligned_cols=264 Identities=9% Similarity=-0.019 Sum_probs=183.2
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|++||++.+...+....++.|++|++||+++++++.....+|..+||.+++.+.+ ..|||+.|++.+++.++..+..+
T Consensus 110 ~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~-~~gw~~~f~~~~~~~~i~~~~~~ 188 (413)
T PRK15403 110 ARFIQGTSICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMH-FVHWKVLFAIIAVMGLIAFVGLL 188 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCHHHHHHHHHHHHHHHHHHHH
Confidence 48999999987777888899999999999999999999999999999999999998 88999999999988887766655
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+||++++++. + .+..
T Consensus 189 ~~lp~~~~~~~~-~-~~~~------------------------------------------------------------- 205 (413)
T PRK15403 189 LAMPETVKRGAV-P-FSAK------------------------------------------------------------- 205 (413)
T ss_pred HhCCCCccccCC-C-CChH-------------------------------------------------------------
Confidence 556654321100 0 0000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
....++++++|||.++...+...+.....+.+..+.|.++++.+|+++.+
T Consensus 206 ------------------------------~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~ 255 (413)
T PRK15403 206 ------------------------------SVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ 255 (413)
T ss_pred ------------------------------HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH
Confidence 00124678899999999999888888888999899999999988999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.++...+...+..+++.+.+++.+|..+++.. .....+...+..+...+.. ...+++........+.+.+.+..
T Consensus 256 ~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~~~---~~~~~~~~ig~~l~~~~~~---~~~~~~~~~~~~~~l~~~G~~~~ 329 (413)
T PRK15403 256 FAWTQVPVFGAVIVANAIVARFVKDPTEPRFI---WRAVPIQLVGLALLIVGNL---LWPHVWLWSVLGTSLYAFGIGLI 329 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchhHH---HHHHHHHHHHHHHHHHHHH---HccccHHHHHHHHHHHHHHHHHH
Confidence 99999888888888888888876544333320 0000111122221111111 12223322333444444444455
Q ss_pred cccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
.+........-.+..+|++.++.+..+..+...++...+.+.++
T Consensus 330 ~p~~~~~al~~~~~~~G~a~a~~~~~~~~~~~~~~~~~g~~~~~ 373 (413)
T PRK15403 330 FPTLFRFTLFSNNLPKGTVSASLNMVILMVMAVSVEIGRWLWFN 373 (413)
T ss_pred hHHHHHHHhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44444222222233579999999999998888888888876654
No 141
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.76 E-value=2.8e-18 Score=192.09 Aligned_cols=282 Identities=16% Similarity=0.174 Sum_probs=195.7
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+ ..|...+.+.|++|+|||+++.++...+..+|..++|++++.+.+ ..|||+.|++.+++.++..+..++
T Consensus 114 ~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~ 191 (408)
T PRK09874 114 RALLGLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD-SYGLRPVFFITASVLFLCFLVTLF 191 (408)
T ss_pred HHHHHHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHH
Confidence 778888755 678888899999999999999999999999999999999999999 899999999998887777766666
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
++||++++.+ +++..+
T Consensus 192 ~~~~~~~~~~---~~~~~~------------------------------------------------------------- 207 (408)
T PRK09874 192 CIRENFQPVS---KKEMLH------------------------------------------------------------- 207 (408)
T ss_pred HhccCccccc---chhhhH-------------------------------------------------------------
Confidence 6665432111 000000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHH-HHHHHHHHHHHHHhhchhhHHHHhhCCccc-
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLI-ISEVGHDYGLYLISTDLPKYMSEVIGLSVA- 239 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~- 239 (817)
..+..+.+++|+++... ....+..........+.|.|.++..+....
T Consensus 208 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (408)
T PRK09874 208 -------------------------------MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNI 256 (408)
T ss_pred -------------------------------HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHH
Confidence 00122345566654432 223333344445556778888774332221
Q ss_pred --ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHh
Q psy11734 240 --ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 240 --~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (817)
..+.+.....++..++.+..|+++||+++|+. ...+..+..+.+....... +.+...+...+.+.+.
T Consensus 257 ~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~ 325 (408)
T PRK09874 257 AFISGMIASVPGVAALLSAPRLGKLGDRIGPEKI----------LITALIFSVLLLIPMSFVQ-TPLQLGILRFLLGAAD 325 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccchh----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHhhh
Confidence 24555566778888999999999999999885 5555555555554444443 3444444444445555
Q ss_pred hhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734 318 GFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA 396 (817)
Q Consensus 318 g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (817)
+...+.......+. +++++|+.+++.+..+.+|.++||.+.|.+.|..
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~------------------------------- 374 (408)
T PRK09874 326 GALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANY------------------------------- 374 (408)
T ss_pred HhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhc-------------------------------
Confidence 55555555455554 4578999999999999999999999999888765
Q ss_pred cccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
+|+..|++.+++.+++.++..+..|+
T Consensus 375 --------------g~~~~f~~~~~~~l~~~~~~~~~~~~ 400 (408)
T PRK09874 375 --------------GFRAVFLVTAGVVLFNAVYSWNSLRR 400 (408)
T ss_pred --------------chhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58999999999888887766554433
No 142
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.76 E-value=3.8e-18 Score=189.14 Aligned_cols=255 Identities=11% Similarity=0.026 Sum_probs=195.4
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|.++|.+.+...|...++..++ +|||+++.|......++|.+++|++++++.+ ..|||+.|++.....+ +.+..+.
T Consensus 101 ~~l~~~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~-~~g~~~~f~~~~~~~~-~~~~~~~ 176 (382)
T TIGR00902 101 IGLFALFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIG-MFDEQNILAILTAGLA-FMLIGFL 176 (382)
T ss_pred HHHHHHHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHH-HcChhHHHHHHHHHHH-HHHHHHH
Confidence 6778888888899988887654 5889999999999999999999999999999 9999999998765432 2223333
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
.+++++.++. ++ +. + +
T Consensus 177 -~~~~~~~~~~-~~-~~--------~-----~------------------------------------------------ 192 (382)
T TIGR00902 177 -IKPTIPPKDA-IP-ED--------E-----S------------------------------------------------ 192 (382)
T ss_pred -cCCCCCCCcc-cc-cc--------c-----c------------------------------------------------
Confidence 3332111100 00 00 0 0
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
+...+.++++|||+++...+..++..........+.|.|+++ +|.++.+.
T Consensus 193 -----------------------------~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~ 242 (382)
T TIGR00902 193 -----------------------------QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASAT 242 (382)
T ss_pred -----------------------------ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHH
Confidence 011236789999999999999998888999999999999987 79999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 321 (817)
|.+.....++.+++.++.+++.||+++|+. +..+.+...+......+.+ +.+.......+-+...+...
T Consensus 243 g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~q~l~g~~~~~~~ 311 (382)
T TIGR00902 243 GLLWGIGVLAEIIIFAFSNKLFQNCSARDL----------LLISAIACVGRWAIIGAIE-AFPLIFLLQILHCGTFAVCH 311 (382)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHhhCCHHHH----------HHHHHHHHHHHHHHHHhHh-hHHHHHHHHHHHHHHHHHHH
Confidence 999888899999999999999999999885 6778887777777666544 55555555555666666666
Q ss_pred ccccccccccCCCchhHHHHHHHh-hhhhcccccccccceecccc
Q psy11734 322 ASIRVNPIDLSPNFSGTIMALSNG-LGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 322 ~~~~~~~~~~~p~~~g~a~g~~~~-~~~lg~~~~~~i~g~l~~~~ 365 (817)
+....+.++.++++++++.++.+. ...+|.+++|.+.|.+.|+.
T Consensus 312 ~~~~~~i~~~~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~ 356 (382)
T TIGR00902 312 LAAMRYIAAQPGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTL 356 (382)
T ss_pred HHHHHHHHhCCHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666667755789999999875 45689999999999999885
No 143
>PRK12382 putative transporter; Provisional
Probab=99.76 E-value=6.4e-18 Score=188.15 Aligned_cols=272 Identities=13% Similarity=0.062 Sum_probs=188.3
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...|...+++.|++|+|||++++++.+.+...|..++|++++++.+ ..|||+.+++..++.++...
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~--- 193 (392)
T PRK12382 118 GRLILGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHS-HFGFAALALTTMVLPLLAWA--- 193 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHHHH---
Confidence 38899999999999999999999999999999999999999999999999999999 89999988876544333221
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.++.|++++.. +++
T Consensus 194 -~~~~~~~~~~~~--~~~-------------------------------------------------------------- 208 (392)
T PRK12382 194 -FNGTVRKVPAHA--GER-------------------------------------------------------------- 208 (392)
T ss_pred -HHHhccCCCCCc--ccC--------------------------------------------------------------
Confidence 222223221100 000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
.+.++.+| .++...+...+..........+.|.|+++ .|++ +
T Consensus 209 ---------------------------------~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~ 250 (392)
T PRK12382 209 ---------------------------------PSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--M 250 (392)
T ss_pred ---------------------------------chHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--h
Confidence 00111111 11111112223344555666788888877 4654 4
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.+.......++..+++++.|++.||+++|+. ...+..+..++...+...+ +.........+.+.+.+..
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~ 319 (392)
T PRK12382 251 AGFTLTAFGGAFVLMRVLFGWMPDRFGGVKV----------AIVSLLVETVGLLLLWLAP-TAWVALAGAALTGAGCSLI 319 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCee----------hHHHHHHHHHHHHHHHHcc-cHHHHHHHHHHHHHHHHhH
Confidence 5666667788889999999999999999886 5556666566555554443 4444444444444444444
Q ss_pred cccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 321 YASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 321 ~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
.+.......+ .+|++||++.|+.++..++|++++|.+.|.+.|+.
T Consensus 320 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---------------------------------- 365 (392)
T PRK12382 320 FPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSF---------------------------------- 365 (392)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------------------------------
Confidence 4544444444 55689999999999999999999999999998875
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
+|+..|.+.+++.+++.++.+++.|
T Consensus 366 -----------g~~~~~~~~~~~~~~~~~~~~~~~~ 390 (392)
T PRK12382 366 -----------GYPSVFLAGAISAVLGIIVTILSFR 390 (392)
T ss_pred -----------CchHHHHHHHHHHHHHHHHHHhhcc
Confidence 5999999999988888877665543
No 144
>PRK11043 putative transporter; Provisional
Probab=99.75 E-value=2.4e-17 Score=184.13 Aligned_cols=256 Identities=16% Similarity=0.134 Sum_probs=187.3
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+...+...+++.|++|+++|+++.+.......+|..++|.+++++.+ ..|||+.|++.+.+.++..+..++
T Consensus 101 ~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~ 179 (401)
T PRK11043 101 RFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLN-HFGWQAIFATLFAITLLLILPTLR 179 (401)
T ss_pred HHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCChHHHHHHHHHHHHHHHHHHHH
Confidence 7899999988888888999999999999999999999999999999999999999 899999999998877776665554
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
+ ++++++++ +++
T Consensus 180 ~-~~~~~~~~----~~~--------------------------------------------------------------- 191 (401)
T PRK11043 180 L-KPSKKARK----QSQ--------------------------------------------------------------- 191 (401)
T ss_pred c-CCCCCccc----cch---------------------------------------------------------------
Confidence 3 33221110 000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
.+.++++++|+|+++...+...+....++....+.|.++++ +|+++.+.
T Consensus 192 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~ 240 (401)
T PRK11043 192 ------------------------------DALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADI 240 (401)
T ss_pred ------------------------------HHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHH
Confidence 01236678888888877777677777778888899999876 79999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc-cCCChhHHHHHHHHHHHHhhhc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY-VGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
|+...+..++..++++..+++.||+++|+.. + .......+..+.+..... ..++.........+.+.+.+..
T Consensus 241 g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (401)
T PRK11043 241 GLSYVPQTIAFLVGGYGCRAALQKWGGEQLL------P-WLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAI 313 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH------H-HHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHH
Confidence 9988888889999999999999999887641 1 111222222222222222 1223333333344444555555
Q ss_pred cccccccccccCCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 321 YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 321 ~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
.+.......+..|+++|++.|+.++.+..++..++.+.|.+.|.
T Consensus 314 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 314 YPIVVAQALRPFPQATGKAAALQNTLQLGLCFLASLLVSALIST 357 (401)
T ss_pred HHHHHHHHhhhCcccChHHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 56555555566688999999999999999999999998888764
No 145
>PRK10133 L-fucose transporter; Provisional
Probab=99.74 E-value=8e-18 Score=189.27 Aligned_cols=259 Identities=12% Similarity=0.090 Sum_probs=185.8
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-c----------------c-----
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-F----------------T----- 58 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-~----------------~----- 58 (817)
.|+++|+|.|...+....++.|+.|+++|.+.+++.+....+|..+++.+++.+.. . .
T Consensus 123 ~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~ 202 (438)
T PRK10133 123 GLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKH 202 (438)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHH
Confidence 38999999999999999999999878888788999999999999999999876541 0 0
Q ss_pred ---cCcchhHHHHh-hhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhch
Q psy11734 59 ---ASWANVFYIFG-AIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGY 134 (817)
Q Consensus 59 ---~gWr~~f~i~~-~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (817)
.+||++|+... +..++..++.+...||.|+++ +.+ . ++.
T Consensus 203 ~~~~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~------~~~-------~----~~~-------------------- 245 (438)
T PRK10133 203 SLVLSVQTPYMIIVAIVLLVALLIMLTKFPALQSDN------HSD-------A----KQG-------------------- 245 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccc------ccc-------c----ccc--------------------
Confidence 25666676433 333333222222222211100 000 0 000
Q ss_pred hhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHH
Q psy11734 135 TLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVG 214 (817)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~ 214 (817)
+...+.++++|+|+++...+..++
T Consensus 246 --------------------------------------------------------~~~~~~~~ll~~~~~~~~~l~~~~ 269 (438)
T PRK10133 246 --------------------------------------------------------SFSASLSRLARIRHWRWAVLAQFC 269 (438)
T ss_pred --------------------------------------------------------chhhhHHHHHhCchHHHHHHHHHH
Confidence 001235688999999888888888
Q ss_pred HHHHHHHHhhchhhHH-HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734 215 HDYGLYLISTDLPKYM-SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA 293 (817)
Q Consensus 215 ~~~~~~~~~~~~p~~l-~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 293 (817)
.....++...|.|.|+ ++.+|+++.++++...+..+++.+|++++|++.||+++|+. +..+..+..+.+
T Consensus 270 ~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~ 339 (438)
T PRK10133 270 YVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKV----------LAAYALIAMALC 339 (438)
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH----------HHHHHHHHHHHH
Confidence 8888888888999885 66789999999999999999999999999999999999875 455555444444
Q ss_pred HhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 294 LAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
+.....+ +. .....+.+.+++.+...|.......+..|++.+++.++.. +..+|++++|.+.|.+.|..
T Consensus 340 ~~~~~~~-~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~~~~~as~l~~-~~~~g~~~~~~i~G~l~~~~ 408 (438)
T PRK10133 340 LISAFAG-GH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQDTKYGSSFIV-MTIIGGGIVTPVMGFVSDAA 408 (438)
T ss_pred HHHHHcC-Ch-HHHHHHHHHHHHHHHHHHHHHHHHHcccchhhccchhHHh-HHhccchHHHHHHHHHHHhc
Confidence 4443333 22 2344555667777788888888787878888888888886 46678999999999888765
No 146
>KOG1330|consensus
Probab=99.74 E-value=6.4e-18 Score=178.74 Aligned_cols=285 Identities=14% Similarity=0.121 Sum_probs=205.0
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+|.+.|+|++...|.+.++++|.||.++|++++++++....+|..+|.+++..+.+.+..|||.|+..+++++++.++.+
T Consensus 127 ~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~ 206 (493)
T KOG1330|consen 127 CRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVF 206 (493)
T ss_pred HHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHH
Confidence 48999999999999999999999999999999999999999999999999999998344499999999999999999999
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
++.+|+++..+...+++. +.. .+.
T Consensus 207 ~f~~eP~rga~~~~~~~~-------------~~~-~~~------------------------------------------ 230 (493)
T KOG1330|consen 207 LFVREPERGARDEVDGEN-------------KMV-KPF------------------------------------------ 230 (493)
T ss_pred hhccCcccccccccccCC-------------cCC-CCc------------------------------------------
Confidence 988775332111000000 000 000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHH---hhCCc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSE---VIGLS 237 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~---~~g~s 237 (817)
.....+.+.+.|++.+....+......+..-++..|.|.+.+. ..|++
T Consensus 231 -----------------------------ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~ 281 (493)
T KOG1330|consen 231 -----------------------------TSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFD 281 (493)
T ss_pred -----------------------------cchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCc
Confidence 0012345667788888888888877777777778888887754 34667
Q ss_pred ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc-cchhhHHHHHHHHhHHHHHHHHhhhccCC-ChhHHHHHHHHHHH
Q psy11734 238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDIL-SRTNVRKVFATLGAVLPGVGALAASYVGC-NTSMVAIFFTIGMA 315 (817)
Q Consensus 238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 315 (817)
..+..+...+...++.+|..++|.++||+.++... .+...-......+.......+.+...... +.+..++++.++..
T Consensus 282 ~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~ 361 (493)
T KOG1330|consen 282 HNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGET 361 (493)
T ss_pred cccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 77777777888899999999999999998765432 33333444455555555555555544432 33444455555554
Q ss_pred Hhhhccccc-cccccccCCCchhHHHHHHHhhhhh-cccccccccceecccccccCC
Q psy11734 316 FMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCV-SGMVAPLTVGFLTQNIISINP 370 (817)
Q Consensus 316 ~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~l-g~~~~~~i~g~l~~~~~~~~~ 370 (817)
..-...+.. .....-++|+.|.+++++...+..+ |.+-+|.+.|.+.|+.-++.|
T Consensus 362 ~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~~ 418 (493)
T KOG1330|consen 362 ISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYKP 418 (493)
T ss_pred HHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCCc
Confidence 444444444 4444557789999999999988775 566666699999999866664
No 147
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.74 E-value=1.4e-17 Score=171.01 Aligned_cols=280 Identities=16% Similarity=0.163 Sum_probs=219.5
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc-CcchhHHHHhhhHHHHHhhhhh
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA-SWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~-gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
.+.|.|.+.......++|.+.| +|+-+..+|+++....+|+++++.+.-.+.+ +. |||....+.+.++++.++.|+-
T Consensus 107 ~l~G~gIav~nVLLPslIK~~F-pk~~~~mtglYs~sl~~~aaLaa~lavpla~-~~~gW~~aL~~WAl~allAl~~WlP 184 (395)
T COG2807 107 LLAGAGIAVINVLLPSLIKRDF-PKRVGLMTGLYSTSLGAGAALAAALAVPLAQ-HSGGWRGALGFWALLALLALLIWLP 184 (395)
T ss_pred HHHHhhHHHHHHhhhHHHHhhc-ccchhhHHhHHHHHHHHHHHHHhhhhhHHHH-hhccHHHHHHHHHHHHHHHHHHHhh
Confidence 3578899999999999999999 5788999999999999999999999999998 55 7999999999888888776654
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
-. .|... ++
T Consensus 185 q~------~r~~~--~~--------------------------------------------------------------- 193 (395)
T COG2807 185 QA------LREQA--AS--------------------------------------------------------------- 193 (395)
T ss_pred hc------ccccc--cc---------------------------------------------------------------
Confidence 21 11000 00
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
.+++..+...++|||..|...+.+..++..+|....|+|.++.| +|+|++++
T Consensus 194 ---------------------------~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~a 245 (395)
T COG2807 194 ---------------------------IATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEA 245 (395)
T ss_pred ---------------------------cccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHh
Confidence 00012233468999999999999999999999999999999999 69999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 321 (817)
|.+.+...+.++..++....+.+|...+|. +......++.++++-+.+.+.+..+.+ ..+.+.+.|..+
T Consensus 246 G~llsl~~l~~~~~~ll~P~la~R~~n~r~---------~~~~~~~~~l~G~~G~~~~P~~~~~lw--~~llG~G~G~~F 314 (395)
T COG2807 246 GSLLSLMQLAQLPTALLIPLLARRSKNQRP---------LVVLALLLMLVGLVGLLLAPGQLPILW--ALLLGLGQGGAF 314 (395)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhcccch---------HHHHHHHHHHHHHHHHHHhhhhHHHHH--HHHHhCccchHH
Confidence 999999999999999999999998665554 355666666666666655554444444 233444445555
Q ss_pred ccc--cccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 322 ASI--RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 322 ~~~--~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
+.. ........|++.+.-+|+.+.++++-++.||.++|++.|.+|
T Consensus 315 ~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~g--------------------------------- 361 (395)
T COG2807 315 PLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATG--------------------------------- 361 (395)
T ss_pred HHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcC---------------------------------
Confidence 544 333344566889999999999999999999999999999987
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
+|+...+..+++.+...+.-+...|++.
T Consensus 362 -----------sw~~~~~~l~~~~i~m~i~Gl~a~r~~~ 389 (395)
T COG2807 362 -----------SWSAPLVLLALATLLMLIFGLRAGRNRY 389 (395)
T ss_pred -----------ChHHHHHHHHHHHHHHHHHHhhcchhHH
Confidence 6888888888888877777777666543
No 148
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.74 E-value=1.3e-16 Score=175.20 Aligned_cols=326 Identities=15% Similarity=0.097 Sum_probs=213.9
Q ss_pred HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-----hhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734 222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-----IARDILSRTNVRKVFATLGAVLPGVGALAA 296 (817)
Q Consensus 222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-----g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (817)
+....|.++++ .|.|..+.|+.... .+...+ .++.|+++||+ ||||. ++..+....++.+..+
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~---------~l~~~~~~~~~~~~~l 74 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRS---------WLVLTQVLLLSLLLIL 74 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHH---------HHHHHHHHHHHHHHHH
Confidence 34567778877 69999999988654 444444 89999999998 55543 3556666666555555
Q ss_pred hccCC--ChhHHHHHHHHHHHHhhhccccccccccccC-CCchhHHHHHHHhhhhhcccccccccceecccccccCCCCC
Q psy11734 297 SYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDL 373 (817)
Q Consensus 297 ~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~-p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~ 373 (817)
.+..+ +.+.......+...+.....+...+...|.. +|+|+.+.++......+|..+++.+.+.+.+..+...
T Consensus 75 ~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~---- 150 (356)
T TIGR00901 75 SFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANT---- 150 (356)
T ss_pred HcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhccccc----
Confidence 55432 2222223222333344444455566666655 5899999999999999999999999988776653100
Q ss_pred CCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHH
Q psy11734 374 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLG 453 (817)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 453 (817)
....+|+..|++.++..+++.+...+..|++++. ++. +
T Consensus 151 ---------------------------------~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~-~~~--~------ 188 (356)
T TIGR00901 151 ---------------------------------GLITLWGYIFFWTALLILPGLLVTLFLAKEPQED-ASV--P------ 188 (356)
T ss_pred ---------------------------------ccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc-ccc--c------
Confidence 0123699999999988777665544433332110 000 0
Q ss_pred HHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHH
Q psy11734 454 IMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYG 533 (817)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~ 533 (817)
+ ++. .
T Consensus 189 -------------------------~----------------------------------~~~------~---------- 193 (356)
T TIGR00901 189 -------------------------K----------------------------------PLT------Q---------- 193 (356)
T ss_pred -------------------------h----------------------------------hHH------H----------
Confidence 0 000 0
Q ss_pred HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh---HHHHHH
Q psy11734 534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP---VWSLII 610 (817)
Q Consensus 534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~---~~~~~~ 610 (817)
+ .+.++++++++|. .+...+
T Consensus 194 -----------------------------------------~----------------~~~~~~~~~~~~~~~~~~~~~~ 216 (356)
T TIGR00901 194 -----------------------------------------A----------------VLKPIREFFQRKNMIQALLLLL 216 (356)
T ss_pred -----------------------------------------H----------------HHHHHHHHHHhcCchHHHHHHH
Confidence 0 0012345555554 777777
Q ss_pred HHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734 611 SEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP 689 (817)
Q Consensus 611 ~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 689 (817)
..++....++....+.|.|+++ +|++.++.+......+ ++.+++.+++|++.||+|+|+.+ ..+.++.
T Consensus 217 ~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l----------~~~~~~~ 285 (356)
T TIGR00901 217 LIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYAL----------LLFGIVQ 285 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHH----------HHHHHHH
Confidence 7777888888999999999998 8999999998777665 67889999999999999987643 2444444
Q ss_pred HHHHHHHHhh--c--------CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH
Q psy11734 690 GVGALAASYV--G--------CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC 748 (817)
Q Consensus 690 ~~~~~~~~~~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~ 748 (817)
++....+.+. . ++.+......++..++.+...+...+..++..| ++||+.+|+.+...+
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 286 ALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 4444433332 1 123444445555666667777888888888887 889999999887654
No 149
>KOG4686|consensus
Probab=99.74 E-value=1.9e-17 Score=162.42 Aligned_cols=271 Identities=16% Similarity=0.152 Sum_probs=201.9
Q ss_pred ccccCChhhHHHHHHHHHHHHHHhhhhchhhcc-ccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc
Q psy11734 514 AKFDWDERTQGVILSAFYYGYILTHIPGGILSQ-KFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 514 ~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~D-r~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~ 591 (817)
.|.+++.++..++-+.|..-..+-+.++|++.| |+|.|+.-++-....-++.+..+... ...+|++.++|++-|+|.-
T Consensus 72 ~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgE 151 (459)
T KOG4686|consen 72 LDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGE 151 (459)
T ss_pred cccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCch
Confidence 377788889999999999999999999999999 68998877777777777877776532 2289999999999999876
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 152 SlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~ 231 (459)
T KOG4686|consen 152 SLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALS 231 (459)
T ss_pred hhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence
Q ss_pred --------------cCc------hhHHhhc-CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH
Q psy11734 592 --------------LET------PWAAILS-SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL 650 (817)
Q Consensus 592 --------------~~~------~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 650 (817)
... ++.++.. .|.+|.+.+.+.++..+.+.+....|.++++.+|+|+..++.+.+....
T Consensus 232 lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~ 311 (459)
T KOG4686|consen 232 LGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYG 311 (459)
T ss_pred hhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhh
Confidence 000 0111111 4679999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734 651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPID 730 (817)
Q Consensus 651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (817)
...+.++..|.++||.|++-+. ...+++....+-..+.+..-+|+... .+.+....+.....|..+..
T Consensus 312 Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy~~m---~~lGLsysllAcslWP~va~ 379 (459)
T KOG4686|consen 312 ISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPYTSM---TFLGLSYSLLACSLWPCVAS 379 (459)
T ss_pred hhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHHHHH---HHHhhhHHHHHHHHhhhhhh
Confidence 9999999999999999987542 12222222233333333322444333 33344444444445656666
Q ss_pred cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc-ccHHHHHHHHHHHHHHHHHHHHHhccCcc
Q psy11734 731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL-LEWRVVFWIMFLTLFISNVFFVLFGSGEV 796 (817)
Q Consensus 731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~-~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 796 (817)
+.| ++.|++.|.++.++++|-.+.|.+.|.+.|..|. .+....|.+++...+++..+.+...++.+
T Consensus 380 ~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq~ 447 (459)
T KOG4686|consen 380 LVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQS 447 (459)
T ss_pred hCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheecccc
Confidence 677 7799999999999999999999999999998752 23344566666667777766666654443
No 150
>KOG0253|consensus
Probab=99.74 E-value=9.5e-17 Score=163.49 Aligned_cols=299 Identities=14% Similarity=0.187 Sum_probs=231.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ 523 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (817)
.+.+++|++....-.++....+-....+...|.+.. +++.+..|.
T Consensus 71 gfgrfq~yl~~~ag~gwmad~m~~m~~s~i~~~l~~-----------------------------------~w~~s~~q~ 115 (528)
T KOG0253|consen 71 GFGRFQWYLFFVAGMGWMADAMEMMLLSLILPALDE-----------------------------------VWGPSEGQA 115 (528)
T ss_pred CcccchhhHHHHhhhHHHHHHHHHHHHHHHHHHHHh-----------------------------------hhchhhhhh
Confidence 357899999999999999999999999988888887 999999999
Q ss_pred HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc------------
Q psy11734 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED------------ 591 (817)
Q Consensus 524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~------------ 591 (817)
.++.+....++.+++..+|..+|++|||+.+.+..++..+...+.++++ |+..+.+.|.+.|+|.|
T Consensus 116 ~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~sp--nf~~L~~f~~l~~~g~gg~pv~~~~yle~ 193 (528)
T KOG0253|consen 116 PLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASP--NFASLCVFRALWGFGVGGLPVDSAIYLEF 193 (528)
T ss_pred hHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCC--CeehhhHHHHHHhccCCCccHhHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999 99999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 194 lp~~~r~~~~V~~~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~~~~G~~~kAletL~ki 273 (528)
T KOG0253|consen 194 LPSSHRWLLTVMSFFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFYLAKGDDYKALETLHKI 273 (528)
T ss_pred ccCcCCCcchhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchhhhcCChHHHHHHHHHH
Confidence
Q ss_pred --------------------------------------cCchhHHhhc---CHhHHHHHHHHHHHHHHHHHHHhhHHHHH
Q psy11734 592 --------------------------------------LETPWAAILS---SLPVWSLIISEVGHDYGFYLISSDLPKYM 630 (817)
Q Consensus 592 --------------------------------------~~~~~~~~l~---~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 630 (817)
......+++. .|+..+++..++...+.+|+........+
T Consensus 274 ArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg~VLlttelf 353 (528)
T KOG0253|consen 274 ARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYGSVLLTTELF 353 (528)
T ss_pred HHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 0001122332 24456666777777788888765444433
Q ss_pred H-----------------HHhC--CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHH
Q psy11734 631 S-----------------QVIG--LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGV 691 (817)
Q Consensus 631 ~-----------------~~~g--~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~ 691 (817)
+ ...+ .+...-=.-.....++...|.++.+++.||+|||+++ +.++++..+
T Consensus 354 qsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTM----------al~l~~f~i 423 (528)
T KOG0253|consen 354 QSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTM----------ALSLILFGI 423 (528)
T ss_pred hccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHH----------HHHHHHHHH
Confidence 3 2111 1112222234456788999999999999999999875 477777777
Q ss_pred HHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccH
Q psy11734 692 GALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEW 770 (817)
Q Consensus 692 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~ 770 (817)
+.+++.... +......+.+.+-++....+...+.+..|++| +.|+++.|..+.+..+|+.+.|.+. ...+...
T Consensus 424 flfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA-~~~e~s~---- 497 (528)
T KOG0253|consen 424 FLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA-MRAELST---- 497 (528)
T ss_pred HHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH-HHhccce----
Confidence 776666554 55555566666666777778889999999999 7899999999999999999999998 5555431
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 771 RVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 771 ~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
..+..+.+++++++.+...+++-+.
T Consensus 498 sl~i~vy~~~~ilagIavcffPiEt 522 (528)
T KOG0253|consen 498 SLPIFVYGALFILAGIAVCFFPIET 522 (528)
T ss_pred eehHHHHHHHHHHHHHHheeeeecc
Confidence 2455566666666666666664433
No 151
>TIGR00898 2A0119 cation transport protein.
Probab=99.74 E-value=1.6e-17 Score=191.41 Aligned_cols=278 Identities=13% Similarity=0.127 Sum_probs=176.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+|+++|++.+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+ ||+.|++.+++.++..+..
T Consensus 186 ~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~----wr~~~~~~~i~~~~~~~~~- 260 (505)
T TIGR00898 186 FRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD----WRWLQLAVSLPTFLFFLLS- 260 (505)
T ss_pred HHHHHHhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH----HHHHHHHHHHHHHHHHHHH-
Confidence 48999999999999999999999999999999999999999999999998876543 9999999988777766555
Q ss_pred heeccCCCCCC-CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 81 ILCFNDPKSHP-YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+++||+|+... +.+.++..+..++..+ .++.+.. ++..
T Consensus 261 ~~~~esp~~l~~~~~~~~a~~~l~~~~~---~~~~~~~-~~~~------------------------------------- 299 (505)
T TIGR00898 261 WFVPESPRWLISQGRIEEALKILQRIAK---INGKKLP-AEVL------------------------------------- 299 (505)
T ss_pred HhcCCChHHHHHCCCHHHHHHHHHHHHH---HcCCCCC-HHHH-------------------------------------
Confidence 55666553110 0111111111111111 0000000 0000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhh-ccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLE-GVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSV 238 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 238 (817)
....-+ ..+++.+.++++++|+|.++...+...+.........+..+.++.+ .+.+.
T Consensus 300 ---------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 357 (505)
T TIGR00898 300 ---------------------SLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGNI 357 (505)
T ss_pred ---------------------hhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCCh
Confidence 000000 0011123467899999987666555444333222222222222222 34442
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHh
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFM 317 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~ 317 (817)
.......++..+++.++.+++.||+|||+. ...+..+.+++++.+...++. .........+..++.
T Consensus 358 ---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~----------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (505)
T TIGR00898 358 ---YLDLFISGLVELPAKLITLLLIDRLGRRYT----------MAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGI 424 (505)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHH----------HHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHH
Confidence 233445567788899999999999999875 666666666666666555433 233444444555555
Q ss_pred hhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc
Q psy11734 318 GFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG 359 (817)
Q Consensus 318 g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g 359 (817)
....+....+..|..| +.|+++.|+.+....+|++++|.+.+
T Consensus 425 ~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 425 TSAFQMVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred HHHHHHHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH
Confidence 5556666777888777 68999999999999999999999887
No 152
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.74 E-value=3.3e-17 Score=182.43 Aligned_cols=192 Identities=16% Similarity=0.154 Sum_probs=150.2
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+...+...+++.|++|+|||+++.++.+....+|..++|.+++.+.+ ..|||+.|++.+.+.++..++.++
T Consensus 98 ~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~-~~g~~~~~~~~~~~~~i~~~~~~~ 176 (392)
T PRK10473 98 RFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIML-KFPWQSLFYTMAAMGILVLLLSLF 176 (392)
T ss_pred HHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CcChHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999888 889999999998888887777666
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
.+||++++++. ++. .
T Consensus 177 ~~~~~~~~~~~---~~~--------~------------------------------------------------------ 191 (392)
T PRK10473 177 ILKETRPARAP---AAS--------S------------------------------------------------------ 191 (392)
T ss_pred HcCCCCCcccC---Ccc--------c------------------------------------------------------
Confidence 66654321100 000 0
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
.....++.+|||.++...+...+..........+.|.++++.+|+++.+.
T Consensus 192 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 241 (392)
T PRK10473 192 ------------------------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEY 241 (392)
T ss_pred ------------------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHH
Confidence 01123466788887766666555555566667778989988889999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV 299 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (817)
+.......++..++.++.+++.||+++|+. ...+..+..++...+...
T Consensus 242 ~~~~~~~~~~~i~~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~ 289 (392)
T PRK10473 242 AIIMALTAGVSMTVSFSTPFALGIFKPRTL----------MLTSQVLFLAAGITLALS 289 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----------HHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999875 555655555555555443
No 153
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.74 E-value=5.3e-16 Score=174.70 Aligned_cols=354 Identities=16% Similarity=0.149 Sum_probs=265.7
Q ss_pred HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHH----HHhhcCcccchhhHHHHHHHHhHH
Q psy11734 213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALAD----FFIARDILSRTNVRKVFATLGAVL 288 (817)
Q Consensus 213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~d----k~g~r~~~~~~~~~~~~~~~~~~~ 288 (817)
+...........+++.|+++..|.++...|.+.....+...+..++.|.++| |+||||. .+..+...
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp---------~~l~g~i~ 81 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRP---------WILIGAIL 81 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccce---------EeehhhHH
Confidence 4455566666778999999999999999999999999999999999999999 7888877 37788888
Q ss_pred HHHHHHhhhccCC-C------hhHHHHHHHHHHHHhhhccccccccccccCC--CchhHHHHHHHhhhhhcccccccccc
Q psy11734 289 PGVGALAASYVGC-N------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVG 359 (817)
Q Consensus 289 ~~~~~~~~~~~~~-~------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--~~~g~a~g~~~~~~~lg~~~~~~i~g 359 (817)
.++++.++...++ + ..+..+...+...+.........+...|..+ ++|.+..+..+....+|+.+...+.+
T Consensus 82 ~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~ 161 (428)
T PF13347_consen 82 LALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAP 161 (428)
T ss_pred HHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8887777766522 1 1122333333344444445555667777665 68999999999999998887777777
Q ss_pred eecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 360 FLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 360 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
.+.+..++. ....+|+...++.+++.+++.++..+..||+++
T Consensus 162 ~l~~~~g~~--------------------------------------~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~ 203 (428)
T PF13347_consen 162 ILVSWFGGG--------------------------------------DTSNGYRWMALVLAIVGLVFFLITFFFVKERSV 203 (428)
T ss_pred hhhhhhccC--------------------------------------ccchHHHHHHHHHHHHHHHHhhhhhheeeeccc
Confidence 776554310 111379999999999988888887777666221
Q ss_pred cccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCC
Q psy11734 440 YWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWD 519 (817)
Q Consensus 440 ~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 519 (817)
+.+++.+ +.+
T Consensus 204 ~~~~~~~--------------------------------------------------------------------~~~-- 213 (428)
T PF13347_consen 204 EVTEQEK--------------------------------------------------------------------KIS-- 213 (428)
T ss_pred ccccccc--------------------------------------------------------------------ccc--
Confidence 1111100 000
Q ss_pred hhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHh
Q psy11734 520 ERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAI 599 (817)
Q Consensus 520 ~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~ 599 (817)
.++.++++
T Consensus 214 ------------------------------------------------------------------------~~~~~~~~ 221 (428)
T PF13347_consen 214 ------------------------------------------------------------------------LRDSLRSL 221 (428)
T ss_pred ------------------------------------------------------------------------cccchhhh
Confidence 12345778
Q ss_pred hcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhH
Q psy11734 600 LSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRK 679 (817)
Q Consensus 600 l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~ 679 (817)
++||+++......++............+.|.+++.|.+ ...+.+.....+..+++.++.++++||+|+|+.+
T Consensus 222 ~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~------- 293 (428)
T PF13347_consen 222 FRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVY------- 293 (428)
T ss_pred cccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeeh-------
Confidence 89999999999999988888888889999999988877 5667777788899999999999999999999875
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHH
Q psy11734 680 VFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVS 750 (817)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g 750 (817)
..+..+.+++.+++.+.+ .+.+...+...+.+.+.+......++...|+.+ +..|...|+.+....++
T Consensus 294 ---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~ 370 (428)
T PF13347_consen 294 ---IIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIG 370 (428)
T ss_pred ---hhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHH
Confidence 377777777777666654 466777777777888877777777777777654 34799999999999999
Q ss_pred HhHHHHHHHHhhcCCc
Q psy11734 751 GMVAPLTVGFLTQNKT 766 (817)
Q Consensus 751 ~~i~p~~~g~~~~~~g 766 (817)
..+++.+.+.+.+..|
T Consensus 371 ~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 371 QGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999998887654
No 154
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.73 E-value=1.3e-17 Score=183.14 Aligned_cols=256 Identities=16% Similarity=0.093 Sum_probs=185.6
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc--CcchhHHHHhhhHHHHHhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA--SWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~--gWr~~f~i~~~~~~i~~~~~ 79 (817)
|+++|+|.+...+....++.|++| +||++++++++.+..+|..+++.+++.+.+ .. +||+.|.+.+.+.++...
T Consensus 94 ~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~-~~~~~w~~~f~~~~~~~~~~~~-- 169 (355)
T TIGR00896 94 TALIGVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQ-HSGGHWQQALAWWALPALLALL-- 169 (355)
T ss_pred HHHHHHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHHH--
Confidence 788999999888888889999996 689999999999999999999999998887 54 399999887655443322
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
..+|+.+++++ + +. +.
T Consensus 170 -~~~~~~~~~~~---~-~~--------------~~--------------------------------------------- 185 (355)
T TIGR00896 170 -AWIPQVRRRVA---A-NQ--------------TT--------------------------------------------- 185 (355)
T ss_pred -HHhhhhccccC---C-CC--------------CC---------------------------------------------
Confidence 22333221110 0 00 00
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
.+.+.++++|||.++...+..++....++....|+|.|+++ +|+|..
T Consensus 186 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~ 232 (355)
T TIGR00896 186 --------------------------------TRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAA 232 (355)
T ss_pred --------------------------------CCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHH
Confidence 01124467889998888777777788888889999999987 699999
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
+.+.......++.++++++.|++.||+++|+. ....+..+..++.+.+.+.+++.... ...+.+.+.+.
T Consensus 233 ~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~g~~~g~ 301 (355)
T TIGR00896 233 TAGSLLALMQLAQAASALLIPALARRVKDQRG---------IVAVLAVLQLVGLCGLLFAPMHGLWA--WALVLGLGQGG 301 (355)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHhhhccchH---------HHHHHHHHHHHHHHHHHHhhhhHHHH--HHHHHHHhhhh
Confidence 99999999999999999999999999965443 14455555555555554444332222 23344455555
Q ss_pred ccccccccc-cccCC-CchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734 320 CYASIRVNP-IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN 369 (817)
Q Consensus 320 ~~~~~~~~~-~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~ 369 (817)
..+...... .+.++ +++++..++.+.+++++++++|.+.|.+.|+.|+|.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 302 AFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC
Confidence 555443333 33443 678999999999999999999999999999987654
No 155
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.73 E-value=5.9e-17 Score=176.82 Aligned_cols=257 Identities=26% Similarity=0.425 Sum_probs=215.1
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+...+++.|++|+|||+++.++......+|..+++.+++.+.+ ..+||+.|++.+.+.++..+...
T Consensus 93 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 171 (352)
T cd06174 93 GRFLLGLGGGALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAE-SLGWRWLFLILAILGLLLALLLL 171 (352)
T ss_pred HHHHHHcccccccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999 88999999998877666655443
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+. +
T Consensus 172 ~~-~---------------------------------------------------------------------------- 174 (352)
T cd06174 172 FL-L---------------------------------------------------------------------------- 174 (352)
T ss_pred HH-H----------------------------------------------------------------------------
Confidence 32 0
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
|.++...+..++..........+.|.++++.+|.+..+
T Consensus 175 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
T cd06174 175 ------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE 212 (352)
T ss_pred ------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 34566777777888888889999999999877999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcC-cccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARD-ILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
.+.......++..+++++.+++.||.++|+ . ...+..+..++........ +.........+.+.+.+.
T Consensus 213 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~----------~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~ 281 (352)
T cd06174 213 AGLLLSLFGLGGILGALLGGLLSDRLGRRRLL----------LLIGLLLAALGLLLLALAP-SLALLLVALLLLGFGLGF 281 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999988 5 6667777677666666554 455555566666666667
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPL 398 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (817)
..+.......+..| ++|++.+|+.+..+.+++.++|.+.|.+.|+.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~--------------------------------- 328 (352)
T cd06174 282 AFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTG--------------------------------- 328 (352)
T ss_pred cchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------------------------------
Confidence 77777777777766 89999999999999999999999999888753
Q ss_pred cccccccCCccchhHHHHHHHHHHHHHhhhhheee
Q psy11734 399 TVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLF 433 (817)
Q Consensus 399 ~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~ 433 (817)
+|+..|++.+++.+++.+...++
T Consensus 329 ------------~~~~~~~~~~~~~~i~~i~~~~~ 351 (352)
T cd06174 329 ------------GYGGVFLILAALALLAALLLLLL 351 (352)
T ss_pred ------------CcchHHHHHHHHHHHHHHHheec
Confidence 58889999988888887766543
No 156
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.72 E-value=2.9e-17 Score=182.10 Aligned_cols=255 Identities=16% Similarity=0.102 Sum_probs=187.6
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|.++|++.+...|...+++.++ ++||+++.+.......+|.++||++++++.+ +.|||..|++.+...++.. +..+
T Consensus 101 ~~l~g~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~-~~g~~~~f~~~~~~~~~~~-~~~~ 176 (382)
T PRK11128 101 IGLFNLFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVS-WFGEQAILWILTAGVASML-LGQL 176 (382)
T ss_pred HHHHHHHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHH-HcChhHHHHHHHHHHHHHH-HHHH
Confidence 6788998888999888888876 4678999999999999999999999999999 8999999998876444433 3333
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
+.||++ +. ++++++ .
T Consensus 177 ~~~~~~---~~-~~~~~~-------~------------------------------------------------------ 191 (382)
T PRK11128 177 LRPTIM---PQ-GESRQQ-------E------------------------------------------------------ 191 (382)
T ss_pred ccCCCC---Cc-cccccc-------c------------------------------------------------------
Confidence 333321 11 000000 0
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAEN 241 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 241 (817)
++.+.++++++|||+++...+..++..........+.|.|+++ .|++..+.
T Consensus 192 ----------------------------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~ 242 (382)
T PRK11128 192 ----------------------------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTI 242 (382)
T ss_pred ----------------------------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHH
Confidence 0012347889999999998888888777777778888999976 79999999
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~ 321 (817)
|.+.....++..+..++.|++.||+++|+. +..+....++....+...+ +.+...+...+.+...+...
T Consensus 243 g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~----------l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~g~~~~~~~ 311 (382)
T PRK11128 243 GYLWSLGVVAEVLIFAFSNRLFRRWSARDL----------LLLSAICGVVRWGLMGSTT-ALPWLIVIQILHCGTFTVCH 311 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHH----------HHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHHHHHHHHH
Confidence 998888888999999999999999998875 5666666666655554443 44444444444455555555
Q ss_pred ccccccccccCCCchhHHHHHHHhh-hhhcccccccccceecccc
Q psy11734 322 ASIRVNPIDLSPNFSGTIMALSNGL-GCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 322 ~~~~~~~~~~~p~~~g~a~g~~~~~-~~lg~~~~~~i~g~l~~~~ 365 (817)
+....+..+.+++++++..++.+.. ..+|.++||.+.|.+.|..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~ 356 (382)
T PRK11128 312 LAAMRYIAARPGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHL 356 (382)
T ss_pred HHHHHHHHHCCHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 5555556666677788899988744 4567789999999999886
No 157
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.72 E-value=1.5e-17 Score=210.34 Aligned_cols=263 Identities=16% Similarity=0.100 Sum_probs=191.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+|++||++.+...|...+++.|++|+++|++++|+.+++.++|.++||+++|++.+ ..|||+.|+..++..++. ++..
T Consensus 114 ~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~-~~~~~~~~~~~~~~~~~~-~~~~ 191 (1140)
T PRK06814 114 ALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATI-SGNFVILVALLMGIAVLG-WLAS 191 (1140)
T ss_pred HHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH-HHHH
Confidence 48999999999999999999999999999999999999999999999999999999 899999995554444444 3344
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+.+|+++++++..+.+.. ..
T Consensus 192 ~~~~~~~~~~~~~~~~~~-~~----------------------------------------------------------- 211 (1140)
T PRK06814 192 LFIPKTGNAAPDLKIDRN-II----------------------------------------------------------- 211 (1140)
T ss_pred hhCCCCCCCCCCCeeccc-hH-----------------------------------------------------------
Confidence 444444322111000000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
+.....++.+.++|.++...+..++.....+++..++|.|+++.+|.++.+
T Consensus 212 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~ 262 (1140)
T PRK06814 212 -----------------------------RSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENV 262 (1140)
T ss_pred -----------------------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHH
Confidence 000123677889999999999988888888888899999999989999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-------------------CC
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-------------------GC 301 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~ 301 (817)
.|++.....+++++|+++.|+++||..+++. +..+.++..++.+.+.+. ..
T Consensus 263 ~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1140)
T PRK06814 263 ATLFLAVFSVGVAVGSFLASKLSEGRITLLY----------VPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR 332 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCceeeee----------ehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence 9999999999999999999999988776654 222323222222222111 12
Q ss_pred ChhHHHHHHHHHHHHhhhcccccccccccc-CCCchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~-~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
+.+...+..++.+.+.+...+...+..++. +++++|+++|+.|++.+++..+++.+.|.+.+.
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~ 396 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQAL 396 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 333344444444455555555555565554 457999999999999999999999998887643
No 158
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.72 E-value=6.1e-16 Score=176.29 Aligned_cols=360 Identities=10% Similarity=0.020 Sum_probs=228.9
Q ss_pred HHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHHHHHHHH
Q psy11734 210 ISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRKVFATLG 285 (817)
Q Consensus 210 i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~~~~~~~ 285 (817)
+..+..+.....+..|++.|++++.|.++..+|.+....-+...+..++.|+++||. ||||. ++..+
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp---------~il~g 83 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKP---------WILIG 83 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcch---------hHhhh
Confidence 344445666677788899999999999999999999999999999999999999954 77665 46677
Q ss_pred hHHHHHHHHhhhccCC-C-h---hHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhccccccccc
Q psy11734 286 AVLPGVGALAASYVGC-N-T---SMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTV 358 (817)
Q Consensus 286 ~~~~~~~~~~~~~~~~-~-~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~ 358 (817)
....++++.++...++ + . .+..+...+...+.........+...|+. +++|.+.++......++|+.+.+.+.
T Consensus 84 ~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~ 163 (473)
T PRK10429 84 TLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFT 163 (473)
T ss_pred hHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7776666555544321 1 1 12222222233334444444566666755 47899999988787777766665554
Q ss_pred ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
..+.+..|. .....+|+....+.+++.+++.....+..||+.
T Consensus 164 ~~~~~~~g~--------------------------------------~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~ 205 (473)
T PRK10429 164 LPFVNYVGG--------------------------------------GDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVY 205 (473)
T ss_pred HHHHHHhCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHHcCceecC
Confidence 443332210 001236777777777776666555544444332
Q ss_pred ccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccC
Q psy11734 439 QYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDW 518 (817)
Q Consensus 439 ~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 518 (817)
++.+++. + + + +..
T Consensus 206 ~~~~~~~-~-------------------------------~---------------------------~------~~~-- 218 (473)
T PRK10429 206 SSDNQVS-A-------------------------------E---------------------------G------SHL-- 218 (473)
T ss_pred Ccccccc-c-------------------------------c---------------------------c------cCC--
Confidence 1100000 0 0 0 000
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHH
Q psy11734 519 DERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAA 598 (817)
Q Consensus 519 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~ 598 (817)
+. ++.++.
T Consensus 219 --------------------------------------------------------~~----------------~~~~~~ 226 (473)
T PRK10429 219 --------------------------------------------------------TL----------------KDIVAL 226 (473)
T ss_pred --------------------------------------------------------CH----------------HHHHHH
Confidence 00 112455
Q ss_pred hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
+++||.++.+....++.....+....+.+.|.+...+ +....+.+.....+..+++.++.++++||+|+|+.+
T Consensus 227 ~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~------ 299 (473)
T PRK10429 227 IYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILW------ 299 (473)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH------
Confidence 6789998888888888887777777777766665444 556666777777789999999999999999998653
Q ss_pred HHHHHHHHHHHHHHHHHHHh---h-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHH
Q psy11734 679 KVFATLGAVLPGVGALAASY---V-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGL 746 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~ 746 (817)
..+..+..++.+.+.. . +.+.+..++...+.+.+.+......++..+|..+ +..|...|..++.
T Consensus 300 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~ 375 (473)
T PRK10429 300 ----AGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMV 375 (473)
T ss_pred ----HHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHH
Confidence 2344433333333221 1 2233444444444555555555666666666532 4467799999999
Q ss_pred HHHHHhHHHHHHHHhhcCCc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g 766 (817)
..++..+++.+.|.+.+..|
T Consensus 376 ~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 376 VKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999987654
No 159
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.72 E-value=3.6e-16 Score=168.58 Aligned_cols=387 Identities=13% Similarity=0.137 Sum_probs=253.0
Q ss_pred hhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHH
Q psy11734 200 LYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRK 279 (817)
Q Consensus 200 ~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~ 279 (817)
.||+++|......+...+.+-....+.|.+++++.|+|.+++|.+.+...+..++.+++.|.++||.+.||. .
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~-------L 76 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKH-------L 76 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSH-------H
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHH-------H
Confidence 578899999999999888888888999999998889999999999999999999999999999999998874 1
Q ss_pred HHHHHHhH--HHHHHHHhh--hccCCChhHHHHHHHHHHHHhhhccccccccccccC---CCchhHHHHHHHhhhhhccc
Q psy11734 280 VFATLGAV--LPGVGALAA--SYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLS---PNFSGTIMALSNGLGCVSGM 352 (817)
Q Consensus 280 ~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~---p~~~g~a~g~~~~~~~lg~~ 352 (817)
+..+... ..+..+... .....+ .+....+++...+..........+... .++.+--+|=.-..+++|.+
T Consensus 77 -l~~i~~l~~l~~pff~~v~~pll~~n---~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr~~~feYG~~R~wGSig~a 152 (412)
T PF01306_consen 77 -LWFIAILLLLFGPFFIYVFGPLLQSN---FWLGAIIGGIYLGLVFNAGVPLSEAYAERVSRRNGFEYGRARMWGSIGFA 152 (412)
T ss_dssp -HHHHHHHHHTCHHHHHHTHHHHHHTT----HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHHHHSS-HHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHhcCCcchHHHHhhHHHH
Confidence 1111111 112222211 111111 112222222222222222211111111 13345556777788889999
Q ss_pred ccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734 353 VAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL 432 (817)
Q Consensus 353 ~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 432 (817)
++..++|.+.+. +-+..||+..+..++..++..+
T Consensus 153 i~s~~~G~L~~i----------------------------------------------~p~~~fwi~s~~~~il~lll~~ 186 (412)
T PF01306_consen 153 IASLLAGILFNI----------------------------------------------NPNIIFWIASAAAIILLLLLLL 186 (412)
T ss_dssp HHHHHHHHHHHH----------------------------------------------HHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhheeeee----------------------------------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 999999988764 3567788776655544444444
Q ss_pred eccccccc-ccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccc
Q psy11734 433 FGSGEVQY-WNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTT 511 (817)
Q Consensus 433 ~~~~~~~~-~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 511 (817)
.++++.++ ..++
T Consensus 187 ~~~~~~~~~~~~~------------------------------------------------------------------- 199 (412)
T PF01306_consen 187 LKPDVPPQAEVAD------------------------------------------------------------------- 199 (412)
T ss_dssp S---SSSSS-SST-------------------------------------------------------------------
T ss_pred cCCcCchhhhhhc-------------------------------------------------------------------
Confidence 43222211 0000
Q ss_pred ccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 512 LDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 512 ~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
+.+.+.+.. +
T Consensus 200 ---~~~~~~~~~---------------------------------------------------~---------------- 209 (412)
T PF01306_consen 200 ---ALGAKKDKV---------------------------------------------------S---------------- 209 (412)
T ss_dssp ---TSSS-------------------------------------------------------------------------
T ss_pred ---ccccCCCCC---------------------------------------------------c----------------
Confidence 000000000 0
Q ss_pred cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC---CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734 592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG---LSVAENGVLSALPFLIMWLVSMSSSALADYLIV 668 (817)
Q Consensus 592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~ 668 (817)
.+...+++|+|++|.+.+........++.+-...|.|++...+ .+....|++.+...+..++.-.+.+++.+|+|.
T Consensus 210 -~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~ 288 (412)
T PF01306_consen 210 -LKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGA 288 (412)
T ss_dssp -HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred -HHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcCh
Confidence 0134678999999999998888888888888889999886422 344567888888889999999999999999999
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHH-HHH
Q psy11734 669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGL 746 (817)
Q Consensus 669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~-~~~ 746 (817)
|+.+ .++..++.+=.....+.+ +++.....-.+-+.-..+......-++.+.+| |..++...+. +..
T Consensus 289 k~~L----------llag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~ 357 (412)
T PF01306_consen 289 KNLL----------LLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFA 357 (412)
T ss_dssp HHHH----------HHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTT
T ss_pred HhHH----------HHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHH
Confidence 8764 344444444444555554 77777777777777777777777778888887 6678888885 677
Q ss_pred HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
.+++..+.+.+.|.+.|+.| ++..|++++.+.++..++..+..+++
T Consensus 358 ~~~~~~i~s~~~G~lyd~~G---~~~tylimg~iv~~~~li~~f~l~~~ 403 (412)
T PF01306_consen 358 KQIGIIILSPLAGYLYDRIG---FQHTYLIMGLIVLPFTLISAFTLKKD 403 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHS--S
T ss_pred HHHHHHHHhhhHHhhHhhcC---cHHHHHHHHHHHHHHHHHheeeecCC
Confidence 88999999999999999986 77888899988887777776664433
No 160
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.71 E-value=6.1e-17 Score=180.82 Aligned_cols=279 Identities=14% Similarity=0.108 Sum_probs=183.9
Q ss_pred cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhhhhe
Q psy11734 4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFWCIL 82 (817)
Q Consensus 4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~~~~ 82 (817)
+.++..+...|...+++.|++|+|||+++.++...+..+|..+++.+++.+.+ . .|||.+|++.+.+.++..+. .+.
T Consensus 103 ~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~-~~~gw~~~f~i~a~~~l~~~l~-~~~ 180 (402)
T PRK11902 103 LVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLAD-RVLGWGNTYLLMAGLMLAGALT-TLW 180 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHh-cccCHHHHHHHHHHHHHHHHHH-HHh
Confidence 45566677788899999999999999999999999999999999999999988 5 49999999988776655443 344
Q ss_pred eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734 83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA 162 (817)
Q Consensus 83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (817)
.||+++.++. +++.++
T Consensus 181 ~~e~~~~~~~-~~~~~~--------------------------------------------------------------- 196 (402)
T PRK11902 181 APEPEVPARP-PRSLGE--------------------------------------------------------------- 196 (402)
T ss_pred cCCCcccccc-cchhHH---------------------------------------------------------------
Confidence 4543221110 000000
Q ss_pred HHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccc
Q psy11734 163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENG 242 (817)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag 242 (817)
+.++++++++|||.++...+..++..........+.+.++.+.+|+++.+.+
T Consensus 197 ----------------------------~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g 248 (402)
T PRK11902 197 ----------------------------AVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVG 248 (402)
T ss_pred ----------------------------HHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHH
Confidence 0122467889999998877776666555444444566677777899999999
Q ss_pred hhhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH---hhhccCCChhHHHHHHHH----HH
Q psy11734 243 VLSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL---AASYVGCNTSMVAIFFTI----GM 314 (817)
Q Consensus 243 ~~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l----~~ 314 (817)
++....+ ++..++.+++|++.||+++|+. ...+..+..+... .+...+++.+.......+ .+
T Consensus 249 ~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~----------l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g 318 (402)
T PRK11902 249 IVNKTLGLAATIVGALAGGTLMVRLGLYRS----------LMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGG 318 (402)
T ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHhHHHH----------HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Confidence 8876554 5689999999999999998874 3333333333222 222333333333333322 22
Q ss_pred HHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccc
Q psy11734 315 AFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGM 394 (817)
Q Consensus 315 ~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (817)
...+...+......++..| ++..++.+....++..+++.+.|.+.|..
T Consensus 319 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~~~~~~~G~l~~~~----------------------------- 366 (402)
T PRK11902 319 MGTAAFVALLMALCNRSFS---ATQYALLSALASVGRVYVGPTSGYLVEAY----------------------------- 366 (402)
T ss_pred HHHHHHHHHHHHhcCCCCc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----------------------------
Confidence 2233334434445555444 33445555555666665666888888876
Q ss_pred cccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 395 VAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
||+..|.+.+++.+++.++....+
T Consensus 367 ----------------G~~~~f~~~~~~~~~~~~~~~~~~ 390 (402)
T PRK11902 367 ----------------GWPGFYLMTVVIALPGLALLWLMR 390 (402)
T ss_pred ----------------ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999988888776664443
No 161
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.71 E-value=1.4e-14 Score=162.53 Aligned_cols=358 Identities=17% Similarity=0.107 Sum_probs=248.8
Q ss_pred chhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhhc
Q psy11734 242 GVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 242 g~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~~ 320 (817)
++......+...+..++.|.++|+-++||. ++.....+..++...+.+. ++++....++..++..+....
T Consensus 73 ~~~~sis~l~~all~P~lGa~aD~~~~Rk~---------~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~ 143 (477)
T PF11700_consen 73 LYANSISGLLQALLAPFLGAIADYGGRRKR---------FLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEAS 143 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcccccchH---------HHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHH
Confidence 355667778888999999999999888875 3444444545555555554 334666666666677777777
Q ss_pred cccccccccccCC-Cch--------------------------hHHHHHHHhhhhhcccccccccceecccccccCCCCC
Q psy11734 321 YASIRVNPIDLSP-NFS--------------------------GTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDL 373 (817)
Q Consensus 321 ~~~~~~~~~~~~p-~~~--------------------------g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~ 373 (817)
....+++..++.+ +.+ ++.++.-...+++|+.+.-.+.-.+....++.
T Consensus 144 ~vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~----- 218 (477)
T PF11700_consen 144 NVFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGST----- 218 (477)
T ss_pred HHHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCc-----
Confidence 7777888877665 445 78888888888888877666544433322110
Q ss_pred CCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHH
Q psy11734 374 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLG 453 (817)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 453 (817)
+....+.|.++.+.++-.++-.+..+++.|+++++...+..+
T Consensus 219 --------------------------------~~~~~~~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~------ 260 (477)
T PF11700_consen 219 --------------------------------ASNTWAIRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGS------ 260 (477)
T ss_pred --------------------------------cccchhhhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcch------
Confidence 011235677777777766654444444444443321111000
Q ss_pred HHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHH
Q psy11734 454 IMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYG 533 (817)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~ 533 (817)
+.
T Consensus 261 -----------------------------------------------------------------~~------------- 262 (477)
T PF11700_consen 261 -----------------------------------------------------------------SY------------- 262 (477)
T ss_pred -----------------------------------------------------------------hH-------------
Confidence 00
Q ss_pred HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHH
Q psy11734 534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEV 613 (817)
Q Consensus 534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~ 613 (817)
+..++.+ ....++++.|+|+....+++++
T Consensus 263 --------------------------------~~~g~~~-------------------l~~t~k~~~~~~~~~~fLia~~ 291 (477)
T PF11700_consen 263 --------------------------------LRFGFKR-------------------LWRTFKEIRKLRQLFLFLIAYF 291 (477)
T ss_pred --------------------------------HHHHHHH-------------------HHHHHHHHHhChHHHHHHHHHH
Confidence 0000100 0134567778899999999999
Q ss_pred HHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc--cccccchhhHHHHHHHHHHH-H
Q psy11734 614 GHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR--DILSRTNVRKVFATLGAVLP-G 690 (817)
Q Consensus 614 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~--~~~~~~~~r~~~~~~~~~~~-~ 690 (817)
+++-+..++......|.++++|++..+...+.....+.+++|.++.|++.||+|.| +++ ..+.++. .
T Consensus 292 l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l----------~~~l~~~~~ 361 (477)
T PF11700_consen 292 LYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTL----------LISLILWII 361 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHH----------HHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988 432 1222222 2
Q ss_pred HHHHHHH-h-----hcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 691 VGALAAS-Y-----VGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 691 ~~~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
+++..+. + ...+.+...+...+.+.+.+..++..-+...++.| ++.+.-.|+.+..+...+.+||.+.|.+.|
T Consensus 362 i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~ 441 (477)
T PF11700_consen 362 IPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITD 441 (477)
T ss_pred HHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222221 1 12345666666667777777777777788888887 778999999999999999999999999999
Q ss_pred CCccccHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 764 NKTLLEWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 764 ~~g~~~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
.+++ .|..+..+.++.+++.++.....
T Consensus 442 ~tg~--~r~g~~~l~~lf~~gl~ll~~v~ 468 (477)
T PF11700_consen 442 ATGS--QRYGFLFLLVLFLIGLILLFFVD 468 (477)
T ss_pred HhCC--chhHHHHHHHHHHHHHHHHhhcc
Confidence 9854 78899999999999988887663
No 162
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.71 E-value=5.4e-17 Score=178.21 Aligned_cols=241 Identities=14% Similarity=0.106 Sum_probs=173.5
Q ss_pred cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC--------cchhHHHHhhhHHHH
Q psy11734 4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS--------WANVFYIFGAIAVLW 75 (817)
Q Consensus 4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g--------Wr~~f~i~~~~~~i~ 75 (817)
+.+++.+...+...+++.|++|+|||+++.++...+..+|.++++.+++.+.+ ..| ||.+|++.++..++.
T Consensus 92 ~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~-~~g~~~~~~~~wr~~f~i~ai~~l~~ 170 (356)
T TIGR00901 92 LIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLAS-PEFANTGLITLWGYIFFWTALLILPG 170 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhh-hcccccccccccHHHHHHHHHHHHHH
Confidence 44555666678888999999999999999999999999999999999999998 777 999999998877775
Q ss_pred HhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchh
Q psy11734 76 FAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLG 155 (817)
Q Consensus 76 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (817)
.+..++..||++++++. ++++..+
T Consensus 171 ~~~~~~~~~e~~~~~~~-~~~~~~~------------------------------------------------------- 194 (356)
T TIGR00901 171 LLVTLFLAKEPQEDASV-PKPLTQA------------------------------------------------------- 194 (356)
T ss_pred HHHHHHhccCCCccccc-chhHHHH-------------------------------------------------------
Confidence 55555445553221110 0000000
Q ss_pred HHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh---HHHHHHHHHHHHHHHHHHhhchhhHHHH
Q psy11734 156 LGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP---VWSLIISEVGHDYGLYLISTDLPKYMSE 232 (817)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~i~~~~~~~~~~~~~~~~p~~l~~ 232 (817)
.++++++++|+|. ++...+..++.....+....+.|.|+++
T Consensus 195 ------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 238 (356)
T TIGR00901 195 ------------------------------------VLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD 238 (356)
T ss_pred ------------------------------------HHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0224667788876 7777777777788888889999999998
Q ss_pred hhCCcccccchhhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC----------C
Q psy11734 233 VIGLSVAENGVLSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG----------C 301 (817)
Q Consensus 233 ~~g~s~~~ag~~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~ 301 (817)
+|++..+.+.+....+ ++.+++.+++|++.||+++|+. +..+.++.++......+.. +
T Consensus 239 -~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (356)
T TIGR00901 239 -MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYA----------LLLFGIVQALTNAGFVWLASNGHHDGITFP 307 (356)
T ss_pred -cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHH----------HHHHHHHHHHHHHHHHHHHhcCcccccccc
Confidence 8999999998877665 6788999999999999998875 4555555554444333221 1
Q ss_pred ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh
Q psy11734 302 NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC 348 (817)
Q Consensus 302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~ 348 (817)
+.+.......+..++.+...+.......+..| +++|+.+|+.+...+
T Consensus 308 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 308 HLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 22334444444456666666777777777555 899999999988765
No 163
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.71 E-value=1.5e-16 Score=177.16 Aligned_cols=257 Identities=15% Similarity=0.159 Sum_probs=186.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+....+..|++++++|+++.++...+..+|..++|.+++.+.+ ..|||+.|++.+.+.++..+...
T Consensus 102 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~-~~g~~~~f~~~~~~~~~~~~~~~ 180 (394)
T PRK11652 102 ASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTT-LFGWRACYLFLLLLGAGVTFSMA 180 (394)
T ss_pred HHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccChHHHHHHHHHHHHHHHHHHH
Confidence 37899999998888888999999999999999999999999999999999999998 88999999998877776666555
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
++.||+|++++ +++.
T Consensus 181 ~~~~~~~~~~~---~~~~-------------------------------------------------------------- 195 (394)
T PRK11652 181 RWMPETRPADA---RRTR-------------------------------------------------------------- 195 (394)
T ss_pred HhCCccCcccc---chhH--------------------------------------------------------------
Confidence 55555432111 0000
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
.+.++++++|||.++...+..+........+..+.|.++++.+|+++.+
T Consensus 196 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 244 (394)
T PRK11652 196 -------------------------------VLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMT 244 (394)
T ss_pred -------------------------------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHH
Confidence 0123567788888876666666666666666777888999888999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~ 319 (817)
.++......++.++++++.+++.||.+++.. ..........+.+...... ..+.+.......+.+.+.+.
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 315 (394)
T PRK11652 245 VSILFILPIPAAFFGAWFAGRPNKRFSTLMW---------QSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGM 315 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHH
Confidence 9998888888899999999999999884322 1112222222222222111 11333344444445555566
Q ss_pred ccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecc
Q psy11734 320 CYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 363 (817)
Q Consensus 320 ~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~ 363 (817)
..+.......+..|+++|++.++.+....+|+++++.+.+.+.+
T Consensus 316 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~~~~~~~~~~~ 359 (394)
T PRK11652 316 LFPLATSGAMEPFPYLAGTAGALLGGLQNIGSGLAALLSAMLPQ 359 (394)
T ss_pred HHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 66666666777778899999999999999999999998876543
No 164
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.71 E-value=3.3e-14 Score=159.06 Aligned_cols=178 Identities=15% Similarity=0.223 Sum_probs=137.4
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-hhcCcccchhhHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-IARDILSRTNVRKV 280 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-g~r~~~~~~~~~~~ 280 (817)
.+.++..+...+.....+|++..++|.|+++.+|++..+++.+.........++.+++|+++||+ |||+.
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~--------- 78 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMA--------- 78 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHH---------
Confidence 34577778888888999999999999999998999999999999999999999999999999999 99986
Q ss_pred HHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-C--chhHHHHHHHhhhhhcccccccc
Q psy11734 281 FATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~--~~g~a~g~~~~~~~lg~~~~~~i 357 (817)
+..+.++..++.+.+.....+.......+.+...+.+...+...+...|..| + +|.+++++.+...++|+.++|.+
T Consensus 79 -iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l 157 (493)
T PRK15462 79 -VMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIA 157 (493)
T ss_pred -HHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHH
Confidence 6777777776655554322222222333333334455555656667777666 3 59999999999999999999999
Q ss_pred cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
.+.+.++. +|+..|.+.++.++++.+.+++..
T Consensus 158 ~g~L~~~~---------------------------------------------Gw~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 158 CGYAQEEY---------------------------------------------SWAMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred HHHHHhhh---------------------------------------------ChHHHHHHHHHHHHHHHHHHHHhh
Confidence 99887654 699999998877777776665433
No 165
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.71 E-value=2e-15 Score=167.40 Aligned_cols=272 Identities=13% Similarity=0.141 Sum_probs=176.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
++.++......++...........+|.+.++ +|.|..+.|++.....++..+++++.|+++||+|||+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~---------- 73 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRS---------- 73 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH----------
Confidence 4557788888888888888888999999987 69999999999999999999999999999999999986
Q ss_pred HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccc-ccccccCCCchhHHHHHHHhhhhhcccccccccce
Q psy11734 282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF 360 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~-~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~ 360 (817)
...+..+..++.....+.+ +.+...+...+.+.+.+...+... ....+.++++|+++++..+....+|..+||.+.+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 74 YYLASLIFAAGCAGLGLMV-GFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6666776666666655544 554444444454555544444432 33344556899999999999999999999999888
Q ss_pred ecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 361 LTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 361 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
+.+.... ...|...+... .+..++.....++++++
T Consensus 153 l~~~~~~-----------------------------------------~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 187 (381)
T PRK03633 153 VSTELMS-----------------------------------------VLPWVTGLVLA----AILPLLFTRILNQQAEN 187 (381)
T ss_pred ccccccc-----------------------------------------hHHHHHHHHHH----HHHHHHHhcccCCCCCC
Confidence 7654210 00232221111 11111111111111111
Q ss_pred cc-CC----CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccc
Q psy11734 441 WN-ES----ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAK 515 (817)
Q Consensus 441 ~~-~~----~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (817)
.+ ++ .++.+++.....++....... ......|...+ +
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~lp~~~~-----------------------------------~ 229 (381)
T PRK03633 188 HDSTSIWPMLKLRQARLGVNGCIISGIVLG---SLYGLMPLYLN-----------------------------------H 229 (381)
T ss_pred CCCCCHHHHHHhcchHHHHHHHHHHHHHHH---HHHHHHHHHHH-----------------------------------H
Confidence 00 01 011111111111111111111 11112344444 6
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHH
Q psy11734 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLT 568 (817)
Q Consensus 516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~ 568 (817)
.|.++++.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+..
T Consensus 230 ~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~ 282 (381)
T PRK03633 230 QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAM 282 (381)
T ss_pred cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999999999999999988888777765443
No 166
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.70 E-value=1.3e-16 Score=170.74 Aligned_cols=257 Identities=14% Similarity=0.081 Sum_probs=190.4
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc---------------ccCcchhHHH
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF---------------TASWANVFYI 67 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~---------------~~gWr~~f~i 67 (817)
++.|.|.+...+.++.++++..|+|++.+.+++.++..++|..++|.+++.++.. ..+||++|++
T Consensus 18 f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~~~~~~~~~~~yl~ 97 (310)
T TIGR01272 18 FVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATANAEAAKVHTPYLL 97 (310)
T ss_pred HHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhhhHHHHHHHHHHHH
Confidence 4679999999999999999999999999999999999999999999999988730 1479999998
Q ss_pred HhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccc
Q psy11734 68 FGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQK 147 (817)
Q Consensus 68 ~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (817)
.+.+.+++.+++.+. + .||.++. ++++. .. ++
T Consensus 98 ia~~~~~~~i~~~~~-~-~p~~~~~--~~~~~------~~----~~---------------------------------- 129 (310)
T TIGR01272 98 LAGALAVLAIIFAFL-P-LPELQEA--DVARV------SS----GD---------------------------------- 129 (310)
T ss_pred HHHHHHHHHHHHHHc-c-CCCCCcc--ccccc------cc----cc----------------------------------
Confidence 776655555443332 2 2322110 00000 00 00
Q ss_pred cCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchh
Q psy11734 148 FGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLP 227 (817)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p 227 (817)
....++++|+|.++...+..++..+.-.++..|.+
T Consensus 130 ---------------------------------------------~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~ 164 (310)
T TIGR01272 130 ---------------------------------------------TTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLV 164 (310)
T ss_pred ---------------------------------------------ccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00123567889999988888888888999999999
Q ss_pred hHHHHh--hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhH
Q psy11734 228 KYMSEV--IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM 305 (817)
Q Consensus 228 ~~l~~~--~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (817)
.|+.+. +|+++.+++........++.+|+++++++.||+++|+. +..+..+..++..+....+ +..
T Consensus 165 ~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~----------l~~~~~l~~~~~~l~~~~~-~~~- 232 (310)
T TIGR01272 165 NFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRY----------LAFNAFLAVLLSIGAALTH-GYV- 232 (310)
T ss_pred HHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHH----------HHHHHHHHHHHHHHHHHcC-CHH-
Confidence 999864 58999999999999999999999999999999998875 4455555555444443333 222
Q ss_pred HHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 306 VAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 306 ~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
....+.+.+++.+..+|.......+..|++.+++.++. .+..+|+++.|.+.|.+.|..
T Consensus 233 ~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~ 291 (310)
T TIGR01272 233 AMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVPLLQGSLADCL 291 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHHHHHHHHHHhc
Confidence 22334455667777778777777676677777788875 678899999999999999875
No 167
>KOG0252|consensus
Probab=99.70 E-value=3e-17 Score=172.63 Aligned_cols=308 Identities=16% Similarity=0.132 Sum_probs=227.9
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
.+....+++.-.+++.+.+|..+++...|-+.. .++.....+=|.++...+.+
T Consensus 37 w~~fk~i~iAG~GfftDsYDlF~I~lVt~il~~---------------------------lY~~~~~~~g~~ps~i~~~V 89 (538)
T KOG0252|consen 37 WKHFKAIIIAGMGFFTDSYDLFSISLVTKILGY---------------------------LYYHGDESGGHYPSGVLALV 89 (538)
T ss_pred HHHHHHHHHhhhhhcccchhhhhHHHHHHHHHH---------------------------HhcCCCCCCCcCCchHHHHH
Confidence 345566778888999999999999998877765 11222222334567778889
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc-----hHHHHHHHHHHhhhcc----------
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG-----PVSMTVLRFLEGVGED---------- 591 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s-----~~~l~~~R~l~Gig~~---------- 591 (817)
..+-.+|.++||+++|+++||+|||+++...+++..++++++++....+ .+.|.+.|++.|+|.|
T Consensus 90 n~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~ 169 (538)
T KOG0252|consen 90 NAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIM 169 (538)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHh
Confidence 9999999999999999999999999999999999999999888875112 4569999999999999
Q ss_pred -----------------------------------------------------------------------------cCc
Q psy11734 592 -----------------------------------------------------------------------------LET 594 (817)
Q Consensus 592 -----------------------------------------------------------------------------~~~ 594 (817)
...
T Consensus 170 SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl~M~Et~ 249 (538)
T KOG0252|consen 170 SESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRLKMPETA 249 (538)
T ss_pred hhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhhcCCcch
Confidence 000
Q ss_pred h-------------------------------------------hHHhh---cCHhHHHHHHHHHHHHHHHHHHHhhHHH
Q psy11734 595 P-------------------------------------------WAAIL---SSLPVWSLIISEVGHDYGFYLISSDLPK 628 (817)
Q Consensus 595 ~-------------------------------------------~~~~l---~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 628 (817)
+ +.+.+ .-+++...+..+|....++|+...+...
T Consensus 250 ~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiafy~~nL~~s~ 329 (538)
T KOG0252|consen 250 RYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAFYGQNLFQSV 329 (538)
T ss_pred hHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccHHHH
Confidence 0 11111 1256677788899999999999999999
Q ss_pred HHHHHhCCChhHHHH--------HHHHHH-HHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy11734 629 YMSQVIGLSVAENGV--------LSALPF-LIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV 699 (817)
Q Consensus 629 ~l~~~~g~s~~~~~~--------~~~~~~-~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 699 (817)
.+++ .|+.+...-. ...+.. ...++|..+...++|++|||. ..+.+++++.+..+.+...
T Consensus 330 I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~----------iq~~GF~~~~i~~~~~~~~ 398 (538)
T KOG0252|consen 330 IFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKY----------IQLMGFFIMTIFFFVIAGP 398 (538)
T ss_pred HHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHH----------HHHhhHHHHHHHHHHHcCC
Confidence 8886 3554432222 222222 333447778888999999765 4468888888877777654
Q ss_pred cC---chHHHHHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc-----CCcccc
Q psy11734 700 GC---NTSMVAICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ-----NKTLLE 769 (817)
Q Consensus 700 ~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~-----~~g~~~ 769 (817)
.+ +.....++..+..++.. ........+.+|.+| +.|++..|+....+..|++++.....++.+ ..+
T Consensus 399 y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g--- 475 (538)
T KOG0252|consen 399 YNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIG--- 475 (538)
T ss_pred cccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCcccc---
Confidence 32 12233334444333333 445555688899999 889999999999999999999999999999 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 770 WRVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 770 ~~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
.+..+++.+++++++.+..+++...+
T Consensus 476 ~~~v~~i~~~~~~~gi~~T~l~pEtk 501 (538)
T KOG0252|consen 476 VRNVFIILAGCMLLGILFTLLIPETK 501 (538)
T ss_pred chHHHHHHHHHHHHhHheeEEeeccc
Confidence 78999999999999999999887433
No 168
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.70 E-value=4e-17 Score=187.81 Aligned_cols=303 Identities=10% Similarity=0.101 Sum_probs=174.0
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
.|+++|++.+...+....++.|++|+|+|+++.++...+..+|..+++.+.+.+.+ ..|||+.|++..+..+ ..++..
T Consensus 114 ~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~-~~~w~~~f~~~~~~~~-~~~~~~ 191 (496)
T PRK03893 114 ARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVP-VWGWRALFFIGILPII-FALWLR 191 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-cCCHHHHHHHHHHHHH-HHHHHH
Confidence 37899999999999999999999999999999999999999999999999999999 9999999997543322 222222
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
...|+ ++++.++++......+... . ... .+++........
T Consensus 192 ~~~p~---~~~~~~~~~~~~~~~~~~~------~--~~~-----------------------------~~~~~~~~~~~~ 231 (496)
T PRK03893 192 KNLPE---AEDWKEKHAGKAPVRTMVD------I--LYR-----------------------------GEHRIINILLTL 231 (496)
T ss_pred HhCCC---chhhhhhccccccchhHHH------H--Hhc-----------------------------chhHHHHHHHHH
Confidence 22233 2211000000000000000 0 000 000000000000
Q ss_pred HHHHHhhhhcc--cCcCCch---------hhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhH
Q psy11734 161 TALLTLLTPLV--AHSGPVS---------MTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKY 229 (817)
Q Consensus 161 ~~~~~~~~~~~--~~~~~~~---------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~ 229 (817)
........... ....+.. .+.....+... .+.+......+..+......+....++|.|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ 301 (496)
T PRK03893 232 AAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSG----------KRWPTGVMLMVVVLFAFLYSWPIQALLPTY 301 (496)
T ss_pred HHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcc----------cchhHHHHHHHHHHHHHhccchHHHHHHHH
Confidence 00000000000 0000000 00000000000 011222223333333333334567889999
Q ss_pred HHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhH-HHH
Q psy11734 230 MSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM-VAI 308 (817)
Q Consensus 230 l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 308 (817)
+++.+|++..+++.+..+..++..++++++|+++||+++|+. ...+..+..+....+....+.... ...
T Consensus 302 l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (496)
T PRK03893 302 LKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKA----------YVCSLLISQLLIIPVFAIGGANVWVLGL 371 (496)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHH----------HHHHHHHHHHHHHHHhhccccHHHHHHH
Confidence 987789999999999999999999999999999999998875 444444444433333222222222 222
Q ss_pred HHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
......+......+.......+..| +++|+++|+.+....+|+.++|.+.|.+.|+.
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~ 429 (496)
T PRK03893 372 LLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRL 429 (496)
T ss_pred HHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccC
Confidence 2222122222223334555666555 78999999999999999999999999998875
No 169
>KOG0569|consensus
Probab=99.70 E-value=1.1e-15 Score=168.16 Aligned_cols=260 Identities=16% Similarity=0.149 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh-hcchHHHHHHHHHHhhhcc----------
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA-HSGPVSMTVLRFLEGVGED---------- 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~-~~s~~~l~~~R~l~Gig~~---------- 591 (817)
.+.+.+.+.+|.++|+...|.++||+|||..+.++.++..++.++..++. ..+++++.++|++.|+..+
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 57779999999999999999999999999999999998888888887764 2388999999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~~A 221 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEEEA 221 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHHHH
Confidence
Q ss_pred --------------------------------cCchhHHhhcCHhH-----HHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q psy11734 592 --------------------------------LETPWAAILSSLPV-----WSLIISEVGHDYGFYLISSDLPKYMSQVI 634 (817)
Q Consensus 592 --------------------------------~~~~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 634 (817)
...++++++++|.. ..+.+.......+.+....|...++++ .
T Consensus 222 ~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~-a 300 (485)
T KOG0569|consen 222 RKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT-A 300 (485)
T ss_pred HHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH-c
Confidence 11235677876543 223333344444566666777777777 5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc----Cc-hHHH---
Q psy11734 635 GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG----CN-TSMV--- 706 (817)
Q Consensus 635 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~~-~~~~--- 706 (817)
|+++.++.+.....++...+.++.+.++.||.|||..+ +.+..++.++.+++.... .. .|..
T Consensus 301 G~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLl----------l~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~ 370 (485)
T KOG0569|consen 301 GFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLL----------LISLSLMAVALLLMSIALFLSNSFGSWLSYLC 370 (485)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHH----------HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999999999988654 455555555444443221 11 2222
Q ss_pred HHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHH
Q psy11734 707 AICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFIS 784 (817)
Q Consensus 707 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~ 784 (817)
+...+...+..+ ...|..+-..+|.+| +.|.+++++...+..+..++-......+.+..|. ..|+...+.+++.
T Consensus 371 i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~----~~filF~i~~~~~ 446 (485)
T KOG0569|consen 371 IAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP----YVFILFVIPLAIF 446 (485)
T ss_pred HHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc----hhhHHHHHHHHHH
Confidence 233333333333 345666788999998 7799999999999999999999999999888862 5667777777777
Q ss_pred HHHHHHhccCccc
Q psy11734 785 NVFFVLFGSGEVQ 797 (817)
Q Consensus 785 ~~~~~~~~~~~~~ 797 (817)
.+..++..++.|.
T Consensus 447 ~i~~~~~lPETkg 459 (485)
T KOG0569|consen 447 LIYLYRYLPETKG 459 (485)
T ss_pred HHHHHHhCcccCC
Confidence 7777766555443
No 170
>PRK09669 putative symporter YagG; Provisional
Probab=99.70 E-value=1.8e-15 Score=171.23 Aligned_cols=353 Identities=10% Similarity=-0.013 Sum_probs=223.6
Q ss_pred HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHHHHHHHHhHH
Q psy11734 213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRKVFATLGAVL 288 (817)
Q Consensus 213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~~~~~~~~~~ 288 (817)
+..+.....+..+++.|+++++|.|+.++|.+.....+...+..++.|+++||. ||||. .+..+...
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp---------~il~~~~~ 89 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRP---------YLLWFAIP 89 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcch---------hHHHHHHH
Confidence 344445566678899999999999999999999999999999999999999994 44443 46666565
Q ss_pred HHHHHHhhhccCC---C--hhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhccccccccccee
Q psy11734 289 PGVGALAASYVGC---N--TSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 289 ~~~~~~~~~~~~~---~--~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
.++++.++...++ . ..+..+...+...+.........+...|.. +++|.+..+.......+|+.+++.+...+
T Consensus 90 ~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl 169 (444)
T PRK09669 90 FGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPL 169 (444)
T ss_pred HHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5555544443332 1 122222222222233333333455555644 37899999999999998888887765554
Q ss_pred cccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccc
Q psy11734 362 TQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYW 441 (817)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~ 441 (817)
....+. .....+|+..+.+.+++.++...+..+..|++.++.
T Consensus 170 ~~~~~~--------------------------------------~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~~ 211 (444)
T PRK09669 170 VDILGK--------------------------------------GDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTPE 211 (444)
T ss_pred HHHhCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCCC
Confidence 443220 001237888888887777666555444433322110
Q ss_pred cCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChh
Q psy11734 442 NESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDER 521 (817)
Q Consensus 442 ~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 521 (817)
+++ +-
T Consensus 212 ~~~----------------------------------------------------------------------~~----- 216 (444)
T PRK09669 212 VDN----------------------------------------------------------------------SS----- 216 (444)
T ss_pred CcC----------------------------------------------------------------------CC-----
Confidence 000 00
Q ss_pred hHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhc
Q psy11734 522 TQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILS 601 (817)
Q Consensus 522 ~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~ 601 (817)
+ ..+++++++|
T Consensus 217 -----------------------------------------------------~----------------~~~~~~~~~~ 227 (444)
T PRK09669 217 -----------------------------------------------------S----------------VWKDLKLLLG 227 (444)
T ss_pred -----------------------------------------------------C----------------HHHHHHHHhC
Confidence 0 0123567788
Q ss_pred CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHH
Q psy11734 602 SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVF 681 (817)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~ 681 (817)
||+++.+....++............+.|.+...+ +++..+.+.....+..+++.++.++++||+|+|+..
T Consensus 228 n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~--------- 297 (444)
T PRK09669 228 NSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATLFLVTGMIAGLFGALLSERLLGKFDRVRAF--------- 297 (444)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH---------
Confidence 9998888777776666665555545544444433 333444555566688889999999999999987653
Q ss_pred HHHHHHHHHHHHHHHHhh-cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHh
Q psy11734 682 ATLGAVLPGVGALAASYV-GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGM 752 (817)
Q Consensus 682 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~ 752 (817)
..+..+..++.+.+... +.+.+...+..++.+.+.+...+..++...|..+ +..|...|..++...+|..
T Consensus 298 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~a 376 (444)
T PRK09669 298 -KWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLA 376 (444)
T ss_pred -HHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHH
Confidence 23333333222222222 2244445555556666666666777777776542 3467889999999999999
Q ss_pred HHHHHHHHhhcCCcc
Q psy11734 753 VAPLTVGFLTQNKTL 767 (817)
Q Consensus 753 i~p~~~g~~~~~~g~ 767 (817)
++|.+.|.+.+..|.
T Consensus 377 lg~~i~g~ll~~~Gy 391 (444)
T PRK09669 377 IGGAVVGWILAWVDY 391 (444)
T ss_pred HHHHHHHHHHHHcCC
Confidence 999999999987653
No 171
>PRK09848 glucuronide transporter; Provisional
Probab=99.70 E-value=9.2e-16 Score=173.89 Aligned_cols=161 Identities=11% Similarity=0.076 Sum_probs=119.3
Q ss_pred hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734 596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT 675 (817)
Q Consensus 596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 675 (817)
+++++|||+++...+..++............|.|+++.+|.+....+.......++.+++.++.+++.||+++|+.+
T Consensus 221 ~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~--- 297 (448)
T PRK09848 221 LQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTF--- 297 (448)
T ss_pred HHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHH---
Confidence 56788999999998888888888888888889999988888776665555555677888999999999999987653
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHH
Q psy11734 676 NVRKVFATLGAVLPGVGALAASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGL 746 (817)
Q Consensus 676 ~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~ 746 (817)
..+..+..++.+.+.+.+. +.+.......+.+.+.+...+..++...|..+ +..|...|+.+..
T Consensus 298 -------~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~ 370 (448)
T PRK09848 298 -------LIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFT 370 (448)
T ss_pred -------HHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHH
Confidence 3555555555555544332 33444444445555556666666666666554 2469999999999
Q ss_pred HHHHHhHHHHHHHHhhcCCc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g 766 (817)
..+|..+++.+.|.+.+..|
T Consensus 371 ~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 371 RKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999998887654
No 172
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.70 E-value=8e-15 Score=161.41 Aligned_cols=185 Identities=17% Similarity=0.187 Sum_probs=138.1
Q ss_pred HHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734 597 AAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 597 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~ 676 (817)
.+++|+|++....+..++..........+.+.|+++.-|.+....+...++..+..++.-...+++..|+|.++++
T Consensus 201 ~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll---- 276 (400)
T PF03825_consen 201 LKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLL---- 276 (400)
T ss_pred HHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH----
Confidence 4789999999888888988889999999999999995337778888888888889999999999999999987653
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHH----HHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHH-HHH
Q psy11734 677 VRKVFATLGAVLPGVGALAASYVGCNTSMVAICFT----IGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLG-CVS 750 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~-~~g 750 (817)
.++.+..++=..++.+..++.+....... +-+...+..+.....+..+..| +.|+++.++.+... .+|
T Consensus 277 ------~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg 350 (400)
T PF03825_consen 277 ------LLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLG 350 (400)
T ss_pred ------HHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHH
Confidence 46666666655555555323333333333 3455555666666677888887 77999999988765 589
Q ss_pred HhHHHHHHHHhhcCCccc---cHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 751 GMVAPLTVGFLTQNKTLL---EWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 751 ~~i~p~~~g~~~~~~g~~---~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
..++..+.|++.|+.|.+ .|...+.+.+++.++..+.+++.
T Consensus 351 ~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~ 394 (400)
T PF03825_consen 351 GAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVIL 394 (400)
T ss_pred HHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999987633 25556666666666666555554
No 173
>PRK10054 putative transporter; Provisional
Probab=99.70 E-value=3.5e-17 Score=182.02 Aligned_cols=255 Identities=11% Similarity=0.088 Sum_probs=179.5
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|.+.|.+.+...|...+...|.+|+|+|+++.|+.....++|.++||++++++.+ .|||++|++.+.+.++..++..+
T Consensus 103 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~--~g~~~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 103 FALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM--QSINLPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHH
Confidence 4556666666778888999999999999999999999999999999999998876 68999999988777766555555
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
++|+++++++ +++. +
T Consensus 181 ~~~~~~~~~~---~~~~--------~------------------------------------------------------ 195 (395)
T PRK10054 181 WVQRSEKAIA---TETG--------S------------------------------------------------------ 195 (395)
T ss_pred HHhccccccc---cchh--------h------------------------------------------------------
Confidence 5544321110 0000 0
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVA 239 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~ 239 (817)
....++++|||+++...+..++..........+.+.|..+. .+.+..
T Consensus 196 -------------------------------~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (395)
T PRK10054 196 -------------------------------VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEK 244 (395)
T ss_pred -------------------------------hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHH
Confidence 00124678899998888888877777777777888887653 344555
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
..+.......+......+..|++.||.++|+. ...+..+..++...+....++.+...+...+.+.+.+.
T Consensus 245 ~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 314 (395)
T PRK10054 245 VVAVVLPVNAAMVVSLQYSVGRRLNAANIRPL----------MTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEII 314 (395)
T ss_pred HHHHHHHhhhhheeeehhHHHHHHccCCchhH----------HHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHH
Confidence 66777666767777777888999999988875 55666666665555544333443333344444444444
Q ss_pred ccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 320 CYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 320 ~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..+.....+.+..| +.+++..+..+ ...+|.++||.+.|.+.|+.
T Consensus 315 ~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~l~~~~ 360 (395)
T PRK10054 315 YAPGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGVILTTL 360 (395)
T ss_pred HHhhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHHHHHHc
Confidence 44555556666555 78899988765 67789999999999999986
No 174
>KOG2504|consensus
Probab=99.69 E-value=5.7e-17 Score=182.70 Aligned_cols=331 Identities=16% Similarity=0.182 Sum_probs=235.0
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL 82 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~ 82 (817)
++.|+|.|..+..+..++..|| +|+|+.|.|+..++.++|..+-|++...+.+ ..|||+.+++.+.+.+-..+....+
T Consensus 143 vi~G~G~~~~~~paiviv~~YF-~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~-~~G~r~~~l~~~~~~l~~~~~~~~~ 220 (509)
T KOG2504|consen 143 VIGGLGLGLIYLPAVVILGTYF-EKKRALATGIAVSGTGVGTVVFPPLLKYLLS-KYGWRGALLIFGGISLNVLVAGALL 220 (509)
T ss_pred HHhhccchhhhcchhhhhhhHh-HHHHHHHHhhhhccCCcceeeHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHc
Confidence 4679999999999999999999 8999999999999999999999999999999 9999999999998888888888777
Q ss_pred eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734 83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA 162 (817)
Q Consensus 83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (817)
.|..++..+. .+++.+......+......+.+..-++....- . ....-....+-.++
T Consensus 221 rp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~----------- 277 (509)
T KOG2504|consen 221 RPLSPPKKPN-EEKDLRNSAASVESTPKPVELRISERDSGLKK--------L---SLSNLATLKRGPDK----------- 277 (509)
T ss_pred CCCCcCCCch-hhhhhccccccccccccccccccccCCCCCCc--------c---cccchhhhhhCCcc-----------
Confidence 7654443322 11100000000000000000000000000000 0 00000000000000
Q ss_pred HHHhhhhcccCcCCchhhhHHhhhccCcccC--chHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLK--TPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
......+.. .-+++++|+|.++...+...+...+++....++|.|..+ +|++..+
T Consensus 278 ----------------------~~~~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~ 334 (509)
T KOG2504|consen 278 ----------------------WRNSPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSND 334 (509)
T ss_pred ----------------------ccccchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhh
Confidence 000000001 114689999999999999999999999999999999995 7999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhc
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~ 320 (817)
++.+....++...+++++.|+++|+...++. .+..++.++.+++...+.+.. +....+....+.++..+..
T Consensus 335 aa~l~Siigi~~i~gRi~~G~laD~~~~~~~--------~~~~~~ll~~gl~~~~~p~~~-~~~~l~~~~~~fG~~~g~~ 405 (509)
T KOG2504|consen 335 AAFLLSIIGVSDIIGRIILGLLADKPGIRAL--------VLFLLTLLIAGLARLFLPFAT-TYVGLIVFSILFGFCVGSF 405 (509)
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcCccccchH--------HHHHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999885432 245666666666665555554 5666777777777777777
Q ss_pred cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccc
Q psy11734 321 YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 399 (817)
Q Consensus 321 ~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (817)
.........|..+ ++-..+.|+...++.++..+||++.|.+.|.++
T Consensus 406 ~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg--------------------------------- 452 (509)
T KOG2504|consen 406 SSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITG--------------------------------- 452 (509)
T ss_pred HHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccC---------------------------------
Confidence 7777767777555 899999999999999999999999999999875
Q ss_pred ccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 400 VGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 400 ~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
+|...|+..++..+++..++++.+
T Consensus 453 -----------~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 453 -----------NYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred -----------CeeeehhhcChHHHHHHHHHHHhH
Confidence 477888888888888887776665
No 175
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.68 E-value=3.3e-17 Score=184.13 Aligned_cols=274 Identities=12% Similarity=0.142 Sum_probs=182.7
Q ss_pred hhhhccC--CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHH
Q psy11734 19 LLAQWSP--PNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEK 96 (817)
Q Consensus 19 ~i~~~~p--~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~ 96 (817)
.+.++.+ +++|++..|......++|..++|++++.+.+ .+||++|++.+.+.++..++.++..+++|++++. + +
T Consensus 127 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~ 202 (420)
T PRK09528 127 AIEAYIERVSRRSGFEYGRARMWGSLGWALCAFIAGILFN--INPQINFWLGSGSALILLVLLFFAKPDAPSTAKV-A-N 202 (420)
T ss_pred hhhhHHHHHHhhccccchhhHHhhhHHHHHHHHHHHHHHh--cCchHhHHHHHHHHHHHHHHHhcccccccchhhh-c-c
Confidence 3444433 3567889999999999999999999999987 5999999998877777666665554443321110 0 0
Q ss_pred HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCC
Q psy11734 97 ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGP 176 (817)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (817)
+. + .+++
T Consensus 203 ~~--------~---~~~~-------------------------------------------------------------- 209 (420)
T PRK09528 203 AL--------G---ANAS-------------------------------------------------------------- 209 (420)
T ss_pred ch--------h---cccc--------------------------------------------------------------
Confidence 00 0 0000
Q ss_pred chhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh---CCcccccchhhhhhHHHHH
Q psy11734 177 VSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI---GLSVAENGVLSALPFLIMW 253 (817)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~---g~s~~~ag~~~~~~~i~~~ 253 (817)
+......++++|||.++...+...+....+.....+.|.|+.+.+ +.+..+.|.+.....++..
T Consensus 210 -------------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 276 (420)
T PRK09528 210 -------------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEA 276 (420)
T ss_pred -------------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHH
Confidence 000123456888998876666555555555555567888877643 4565677888888889999
Q ss_pred HHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccc-cC
Q psy11734 254 LVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPID-LS 332 (817)
Q Consensus 254 ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~ 332 (817)
++.+.+|+++||+++|+. ...+..+..+......+.+ +.+.......+.+...+...+....+..+ .+
T Consensus 277 ~~~~~~g~l~dr~g~~~~----------~~~~~~l~~~~~~l~~~~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~ 345 (420)
T PRK09528 277 LIMFFAPFIINRIGAKNA----------LLLAGTIMAVRIIGSGFAT-GPLEVSILKLLHAFEVPFLLVGVFKYITLNFD 345 (420)
T ss_pred HHHHHHHHHHHHhCcchh----------hHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999986 5566666666655555544 44433333333333333333333344444 45
Q ss_pred CCchhHHHHH-HHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccch
Q psy11734 333 PNFSGTIMAL-SNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSE 411 (817)
Q Consensus 333 p~~~g~a~g~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (817)
++.+++..+. .|+...+|++++|.+.|.+.|.. +
T Consensus 346 ~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~---------------------------------------------G 380 (420)
T PRK09528 346 VRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSI---------------------------------------------G 380 (420)
T ss_pred ccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhh---------------------------------------------C
Confidence 5788888766 67888899999999999998875 5
Q ss_pred hHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 412 WRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 412 ~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
|+..|.+.+++.++..++..++.|+++
T Consensus 381 ~~~~f~~~~~~~~i~~~~~~~~~~~~~ 407 (420)
T PRK09528 381 FQGTYLILGGIVLLFTLISVFTLSGDR 407 (420)
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 899999988888777766665555443
No 176
>KOG3764|consensus
Probab=99.68 E-value=1.7e-16 Score=164.15 Aligned_cols=267 Identities=15% Similarity=0.119 Sum_probs=203.1
Q ss_pred cccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc-
Q psy11734 513 DAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED- 591 (817)
Q Consensus 513 ~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~- 591 (817)
..+++-+++++|++++++.+...+..|+.|.+.||+|+|..+++|+.+....+++.++.+ +++.++++|.+||+|.+
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~--sy~~l~vAR~LQgvgsA~ 175 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGN--SYPMLFVARSLQGVGSAF 175 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcc--hhHHHHHHHHHhhhhHHH
Confidence 346677889999999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 176 ~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~ 255 (464)
T KOG3764|consen 176 ADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD 255 (464)
T ss_pred HHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc
Confidence
Q ss_pred ---cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734 592 ---LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV 668 (817)
Q Consensus 592 ---~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~ 668 (817)
+..++++++++|.++.........+...-..-..+|.++.+....+.-+.|..+....+...+|+.+.|.+.||+++
T Consensus 256 ~~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~ 335 (464)
T KOG3764|consen 256 STEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPH 335 (464)
T ss_pred ccccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCc
Confidence 22347789999999988887777777777777888998988888555588888888899999999999999999996
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHH---HHHHHHHHHHHHhhhhhhhhhhccccCC-C---chHHHHH
Q psy11734 669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSM---VAICFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMA 741 (817)
Q Consensus 669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g 741 (817)
.+++ ..+.+.+...++.....+.+ +... ......+.+........+......|.-. + ..|.+.+
T Consensus 336 ~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVya 406 (464)
T KOG3764|consen 336 LRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYA 406 (464)
T ss_pred hhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHH
Confidence 5442 22344444333333333332 2222 1122222222222222222233333322 2 5799999
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 742 LSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 742 ~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+......+|.++||.++|.+.+..| +++...+.+...++..-++..++.
T Consensus 407 Iad~a~sla~a~GP~~gg~iv~~iG---F~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 407 IADAAFSLAYAIGPTFGGSLVEAIG---FEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred HHHHHHHHhhhccccccchheeehh---HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987 888888888888887766666543
No 177
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.68 E-value=2.1e-16 Score=184.47 Aligned_cols=197 Identities=14% Similarity=0.174 Sum_probs=145.7
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---------------------
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA--------------------- 59 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~--------------------- 59 (817)
.|+++|+|.+..++...+++.|++|+++|+++++++.....+|+++|+++++++.+ .+
T Consensus 178 ~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~-~~~d~~~~~~~~~~l~~~dprWi 256 (633)
T TIGR00805 178 SQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQ-IYVDTGSVNTEDVILTPTDPRWI 256 (633)
T ss_pred HHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHh-cccccccCCCCCCCCCCCCccHH
Confidence 38999999999999999999999999999999999999999999999999999886 32
Q ss_pred -CcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcc
Q psy11734 60 -SWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTH 138 (817)
Q Consensus 60 -gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (817)
+||..|++.+++.++..+..+++.++.|++.++.+.++.+. +..+. .++.++++...
T Consensus 257 GaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~~~--~~~~~-----~~~~~~~~~~~--------------- 314 (633)
T TIGR00805 257 GAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVNVDVHET--EKLEK-----SEDKSRKKNSD--------------- 314 (633)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccchhhhhh--hcccc-----cccccchhhhh---------------
Confidence 26667888888888877665554333343221111110000 00000 00000000000
Q ss_pred ccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHH
Q psy11734 139 IPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYG 218 (817)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~ 218 (817)
..++.+..+++++|||.++...+..++....
T Consensus 315 -------------------------------------------------~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~ 345 (633)
T TIGR00805 315 -------------------------------------------------ITKDFPKIIKRLLCNPIYMLVILAQVIDSLA 345 (633)
T ss_pred -------------------------------------------------hHHHHHHHHHHHHcCcHHHHHHHHHHHHHHH
Confidence 0001123467899999999999999999999
Q ss_pred HHHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhc
Q psy11734 219 LYLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIAR 269 (817)
Q Consensus 219 ~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r 269 (817)
++++.+|+|.|+++.+|+++.+++++..+..+ +.+++.+++|+++||++.+
T Consensus 346 ~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 346 FNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLN 397 (633)
T ss_pred HHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeeccc
Confidence 99999999999999999999999999887776 6789999999999998855
No 178
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.68 E-value=1.7e-16 Score=201.43 Aligned_cols=263 Identities=14% Similarity=0.068 Sum_probs=190.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc---------cCcchhHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT---------ASWANVFYIFGAI 71 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~---------~gWr~~f~i~~~~ 71 (817)
+|+++|++.+...|...+++.|++|+++|++++|+...+..+|.++|+.+++++.+ . .+|++.+.+....
T Consensus 109 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 187 (1146)
T PRK08633 109 VTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFE-SVNGNTPSEILGRIAPAGLVLLA 187 (1146)
T ss_pred HHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHH-hhccccccccccchHHHHHHHHH
Confidence 48899999999999999999999999999999999999999999999999999988 4 3455665555444
Q ss_pred HHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCc
Q psy11734 72 AVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGK 151 (817)
Q Consensus 72 ~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (817)
..++.++..+.+|+.|+..+...+++. ... .
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~---~--------------------------------- 218 (1146)
T PRK08633 188 VAVLGLIFAYRLPKVPAAAPEVFDKKK-------------YLF---P--------------------------------- 218 (1146)
T ss_pred HHHHHHHHHhcCcCCCCCCcccccccc-------------ccc---H---------------------------------
Confidence 444444444445554432211100000 000 0
Q ss_pred cchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHH
Q psy11734 152 HTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMS 231 (817)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~ 231 (817)
+....+++.++++|.++...+..++.....+....++|.|++
T Consensus 219 --------------------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (1146)
T PRK08633 219 --------------------------------------KLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAK 260 (1146)
T ss_pred --------------------------------------HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Confidence 001224667888999988888888877778888889999999
Q ss_pred HhhCCccc-ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHH
Q psy11734 232 EVIGLSVA-ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFF 310 (817)
Q Consensus 232 ~~~g~s~~-~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (817)
+.+|++.. +.+++.....++.++++++.|++.||.++++. ..++.++..++++.+.... +.+...+..
T Consensus 261 ~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 329 (1146)
T PRK08633 261 EVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGL----------VPLGALGLALSLFLLPTAP-SLASVLVLF 329 (1146)
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccc----------hhHHHHHHHHHHHHHHHhh-hHHHHHHHH
Confidence 98999998 99999999999999999999999999998875 5555555555555554443 444444444
Q ss_pred HHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 311 TIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 311 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
++.+++.+...+...+...+..| ++||+++|+.+++.++|..+++.+.+.+.
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~ 382 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFS 382 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 55555555555555666666554 78999999999999999887776665443
No 179
>PTZ00207 hypothetical protein; Provisional
Probab=99.67 E-value=1.5e-14 Score=164.41 Aligned_cols=465 Identities=11% Similarity=0.054 Sum_probs=275.0
Q ss_pred HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734 215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL 294 (817)
Q Consensus 215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (817)
.....|++..+.|.. ++.+|+|..+.+.+..... ......+.+|++.||+|+|++ ..++.++..++.+
T Consensus 39 ~~g~~y~fsv~s~~L-~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~v----------llig~ll~~iG~l 106 (591)
T PTZ00207 39 CTSFMYAFNLISGAM-QARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPI----------FVLSMTVFCLGTL 106 (591)
T ss_pred HHHHHHHHHHHHHHH-HHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHH
Confidence 345667777767755 5568999999888776533 334566678999999999986 7777777777777
Q ss_pred hhhccC-----CChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734 295 AASYVG-----CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN 369 (817)
Q Consensus 295 ~~~~~~-----~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~ 369 (817)
...... .+.+...+...+.+.+.+...+.......+.+|++||.+.|+......+|+++.+.+...+...
T Consensus 107 l~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~~----- 181 (591)
T PTZ00207 107 LFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFPSNRGAVVAIMKTFTGLGSAILGSIQLAFFSD----- 181 (591)
T ss_pred HHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Confidence 666541 2444444444455545444444445555667889999999999999999998655544433221
Q ss_pred CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc---ccCCCC
Q psy11734 370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY---WNESIL 446 (817)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 446 (817)
+|+..|++.+++.++..++...+-+..+.+ +++++.
T Consensus 182 -----------------------------------------~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~ 220 (591)
T PTZ00207 182 -----------------------------------------NTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHL 220 (591)
T ss_pred -----------------------------------------hHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCC
Confidence 477777777777766555444444333221 111100
Q ss_pred chhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHH
Q psy11734 447 PARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVI 526 (817)
Q Consensus 447 ~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~ 526 (817)
....... ....++.+.+-+ |. .++ -..+..
T Consensus 221 ~~~~~~~------------------------------------------~~~~~~~y~~q~--~p---~~~---f~~~~~ 250 (591)
T PTZ00207 221 DEEEKAQ------------------------------------------RLMRKGVYLKQK--AP---MWR---FVYGFV 250 (591)
T ss_pred CHHHHHH------------------------------------------HhhhhhhhhhcC--CC---cee---hhhHHH
Confidence 0000000 000000000000 00 111 134555
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHH---HHHH-HHHHHhh-hcchH-----H------HHHHHHHHhhh-
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLST---AIFT-LLTPLIA-HSGPV-----S------MTVLRFLEGVG- 589 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~---~i~~-~l~~~a~-~~s~~-----~------l~~~R~l~Gig- 589 (817)
.++....|...+.+..... +.++..-..++.+.. ...- +..+.-. +..-. . ---.+.-..=+
T Consensus 251 i~~~l~~yl~~~~~~~~~~-~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 329 (591)
T PTZ00207 251 ILIILIVFLPLQGALVAYL-KLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDK 329 (591)
T ss_pred HHHHHHHHHHHHHHHHHHh-cccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccc
Confidence 5555555555554444321 222222122222111 1111 1111110 00000 0 00000000000
Q ss_pred --cc--------cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhH--HHHHHHHHHHHHHHHHH
Q psy11734 590 --ED--------LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAE--NGVLSALPFLIMWLVSM 657 (817)
Q Consensus 590 --~~--------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~--~~~~~~~~~~~~~ig~~ 657 (817)
.. ..+++.+.+++.++|++++.++|.......+...+....+..-|.+.++ ...+.++.++.+.+|++
T Consensus 330 ~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl 409 (591)
T PTZ00207 330 VVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRL 409 (591)
T ss_pred cccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHH
Confidence 00 0114567788899999999999999999999999998887732663322 33378899999999999
Q ss_pred HHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchH
Q psy11734 658 SSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSG 737 (817)
Q Consensus 658 ~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 737 (817)
.+|+++...-+|+.- .+-.|...+.+..+ +.++.+++.... +.....+..++.+++.|...+......+|++.++-|
T Consensus 410 ~~g~~~~~~~~~~~~-~r~prt~~l~~~~~-~~~~~lll~~~~-p~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g 486 (591)
T PTZ00207 410 CMSYFEIWSQKRRAE-DRVPITIALFIPSV-CIITMLTLFLTL-PKAALPLPYFIAAFANGFMAATIALVTRTIFAKDPA 486 (591)
T ss_pred HHHHHHHHHHhhccc-cccchhHHHHHHHH-HHHHHHHHHHHC-CccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchH
Confidence 999999444444310 11236677777777 555555555543 225677777888888898889999999999999899
Q ss_pred HHHHHHHHHHHHHHhHH-HHHHHHhhcCCc----------cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 738 TIMALSNGLGCVSGMVA-PLTVGFLTQNKT----------LLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 738 ~~~g~~~~~~~~g~~i~-p~~~g~~~~~~g----------~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
+-.-+.....-+|+.+- -.+.|.+.|... ..=++..|++++++++++.+....+
T Consensus 487 ~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l 551 (591)
T PTZ00207 487 KHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITSTYV 551 (591)
T ss_pred HHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHhhe
Confidence 98888877777776665 567888887642 1227899999999999988876654
No 180
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.67 E-value=4.9e-16 Score=175.11 Aligned_cols=392 Identities=14% Similarity=0.134 Sum_probs=234.7
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL 82 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~ 82 (817)
++.|+|.|... .....++|..|.|.|+...++......+...+++.++..+.. ..+|||.|++..+...+..++.+++
T Consensus 139 ~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~-~~~WRw~~~~~~i~~~i~~vl~~~f 216 (599)
T PF06609_consen 139 VLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAA-HSGWRWIFYIFIIWSGIALVLIFFF 216 (599)
T ss_pred HHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhcc-CCCcchHHHHHHHHHHHHHHHHHHH
Confidence 35678876554 456668999999999998888877766666678888877777 7899999999988776665554444
Q ss_pred eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccc-ccccccccCCccchhHHHHHH
Q psy11734 83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIP-GGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 161 (817)
.+.+|+...+.++..+. + +-+++||-. ..+....+..-+..+- +|--...+++.+++...+.+.
T Consensus 217 Y~PP~~~~~~~~~~s~~---~--------~l~~lD~IG----~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~ 281 (599)
T PF06609_consen 217 YFPPPRAQLHGRKLSKR---E--------QLKELDWIG----IFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGF 281 (599)
T ss_pred hCCCchhhhccccCcHH---H--------HHHHhhHHH----HHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHH
Confidence 32221111000000000 0 012344422 2222222222222221 222223566666666666666
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCc-ccCchHHHHhhc-hhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGE-DLKTPWAAILYS-LPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~-~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
.++..++.+ |...+ +.+.-..++||+ |.+....+..++.++.+|....+.|+.....++-|+.
T Consensus 282 ~~Lv~F~~w---------------E~~~~~~~Pl~P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~ 346 (599)
T PF06609_consen 282 VLLVAFVVW---------------EWFGAPKDPLFPHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPI 346 (599)
T ss_pred HHHHHHHHh---------------hhhccCCCCcCCHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCc
Confidence 665555444 22211 223334589998 5677777788888888999999999998888877764
Q ss_pred ---ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHH
Q psy11734 240 ---ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMA 315 (817)
Q Consensus 240 ---~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~ 315 (817)
+.++...+...+..+|..+.|.+..|.++-|. .+..+.+++..++.++... +++....+.+..+.+.
T Consensus 347 ~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw---------~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~ 417 (599)
T PF06609_consen 347 SITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKW---------QLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGF 417 (599)
T ss_pred ccceeehhhhhHHHHHHHHHHHHHHHHHHccchhH---------HHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHH
Confidence 67889999999999999999999988875553 3555665555544444433 3343344455555555
Q ss_pred Hhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccC----------CCCCCCCCccchhhc
Q psy11734 316 FMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN----------PIDLSPNFSGTIMAL 384 (817)
Q Consensus 316 ~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~----------~~~~~~~~~~~~~~~ 384 (817)
+.+.......+..+- .++++.|+++|+..+.|.+|+++|..+...+..+.-... +..+++...+.....
T Consensus 418 giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a 497 (599)
T PF06609_consen 418 GIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIYNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEA 497 (599)
T ss_pred hHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHH
Confidence 555544434334433 555899999999999999999999999877765431111 112211111111100
Q ss_pred c-----cCccccccccccccccc---cccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 385 S-----NGLGCVSGMVAPLTVGF---LTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 385 ~-----~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
. .....+++.- +.+... -.++...++|+++|+....+.+++.+..++++.-
T Consensus 498 ~~~~~~~a~~~iPGit-~~i~~a~~~A~~~aYa~ay~~V~~~siaFG~vaiiaa~fl~d~ 556 (599)
T PF06609_consen 498 LAAGNLEALAAIPGIT-PEIIAAVVAAFQEAYAHAYRYVYYSSIAFGVVAIIAALFLGDI 556 (599)
T ss_pred HhccChhHHhhCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCh
Confidence 0 0111123221 111111 1122345789999999999999998888887643
No 181
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.67 E-value=6.1e-16 Score=172.07 Aligned_cols=246 Identities=13% Similarity=0.017 Sum_probs=172.1
Q ss_pred ccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734 12 TFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHP 91 (817)
Q Consensus 12 ~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~ 91 (817)
..+..-++..|+.++|+++...+....+..+|..+|+.+.+++.+ ..|||..|++.+.+.++..+..++..|++|++++
T Consensus 114 ~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~-~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~~~ 192 (390)
T TIGR02718 114 QDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFG-KFGQRPAFLLVACVPLASLVCVLWLKDRAVASPE 192 (390)
T ss_pred HHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCccc
Confidence 344445566788888888888888888889999999999999999 8999999999998877766665554333221100
Q ss_pred CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcc
Q psy11734 92 YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLV 171 (817)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (817)
+++.
T Consensus 193 ----~~~~------------------------------------------------------------------------ 196 (390)
T TIGR02718 193 ----APLA------------------------------------------------------------------------ 196 (390)
T ss_pred ----cchh------------------------------------------------------------------------
Confidence 0000
Q ss_pred cCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhH-H
Q psy11734 172 AHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPF-L 250 (817)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~-i 250 (817)
...+.++++|+|.++...+..++..........+.|.|++| +|+++++.|.+..... .
T Consensus 197 --------------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~ 255 (390)
T TIGR02718 197 --------------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAV 255 (390)
T ss_pred --------------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHH
Confidence 01236788999998888888888888788888889999988 6999999999888776 4
Q ss_pred HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH-HHhhhcc----CCChhHHHHHHHHHHHHhhhcccccc
Q psy11734 251 IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG-ALAASYV----GCNTSMVAIFFTIGMAFMGFCYASIR 325 (817)
Q Consensus 251 ~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~l~~~~~g~~~~~~~ 325 (817)
...++.+++|++.||+++|+. ...+..+..+. +...... .++.........+.....+...+...
T Consensus 256 ~~~~g~~~~g~l~~r~g~~~~----------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 325 (390)
T TIGR02718 256 TVLLGCGGGAWLVRRAGLWRT----------FILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIY 325 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHH----------HHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 677889999999999999875 33343333221 1111111 11222223333333334444444443
Q ss_pred cc-ccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 326 VN-PIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 326 ~~-~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.. .....| +++|+.+++.+...++|..++|.+.|.+.|..
T Consensus 326 ~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~ 367 (390)
T TIGR02718 326 TAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRF 367 (390)
T ss_pred HHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 344555 78999999999999999999999999998875
No 182
>KOG3764|consensus
Probab=99.66 E-value=1.8e-16 Score=164.00 Aligned_cols=258 Identities=15% Similarity=0.094 Sum_probs=192.8
Q ss_pred CcccccCCcccccchhhhhhhhccCCC-CcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPN-ERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~-~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|.+||+|.+..+...+++++|.||+| ||++++|+...+.++|-.+||+.||.+.+ ..|-+.+|++.+.+.++-..+-
T Consensus 165 AR~LQgvgsA~~~tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe-~~Gk~aPFlVL~~v~Lld~~L~ 243 (464)
T KOG3764|consen 165 ARSLQGVGSAFADTSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYE-FAGKSAPFLVLAIVLLLDGALQ 243 (464)
T ss_pred HHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHh-hcCCcCcHHHHHHHHHHHHHHH
Confidence 399999999999999999999999976 68999999999999999999999999999 9999999999999999988888
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
++.+++...+++ +
T Consensus 244 l~vi~p~~~~~~-----~-------------------------------------------------------------- 256 (464)
T KOG3764|consen 244 LLVIEPTEMDPD-----S-------------------------------------------------------------- 256 (464)
T ss_pred HheeCccccCcc-----c--------------------------------------------------------------
Confidence 887754321110 0
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCccc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVA 239 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 239 (817)
+.+..|+++++++|.++.........+.+.-..--.+|.++.|...-+.-
T Consensus 257 ------------------------------~~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w 306 (464)
T KOG3764|consen 257 ------------------------------TEQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGW 306 (464)
T ss_pred ------------------------------cccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCc
Confidence 01244688999999999888887777777777777788888887775555
Q ss_pred ccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhh
Q psy11734 240 ENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 240 ~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~ 319 (817)
+.|+...|..+..+++..+.|.++||+++.++. ....+.+..+++.....+.+ ++...++-.....++.+.
T Consensus 307 ~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl--------~~~~gl~~~G~~~~~iP~~~-~~~~L~vp~~~l~~~i~~ 377 (464)
T KOG3764|consen 307 EVGLAFLPASLSYAIGTNLFGKLADKYPHLRWL--------LSLGGLATVGVSSGPIPFAT-SIAQLWVPNFGLGFGIGL 377 (464)
T ss_pred ceeeeecccccchhccCchHHHHHHhcCchhHH--------HHHHHHHHHHHHhchhHhhh-hHHHHhhhhHHHHHHHHH
Confidence 999999999999999999999999999965531 23344444444433344443 333332222222222222
Q ss_pred cc-ccccccccccCC---C---chhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 320 CY-ASIRVNPIDLSP---N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 320 ~~-~~~~~~~~~~~p---~---~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.. ........-+.+ + ..|+.+++......+|.++||.++|.+.+..
T Consensus 378 ~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~i 430 (464)
T KOG3764|consen 378 ADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAI 430 (464)
T ss_pred HHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeeh
Confidence 22 222222222222 2 4689999999999999999999999998876
No 183
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.65 E-value=1.7e-16 Score=179.34 Aligned_cols=260 Identities=14% Similarity=0.126 Sum_probs=182.5
Q ss_pred cccCCcccccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHH
Q psy11734 4 MSNFPKGTTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWF 76 (817)
Q Consensus 4 l~G~g~g~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~ 76 (817)
+.+++.+...+...++..|.. +++||++..++...+..+|..+++.+.+.+.. ...|||+++++.+++.++..
T Consensus 108 ~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~ 187 (437)
T TIGR00792 108 LLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSL 187 (437)
T ss_pred HHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHH
Confidence 344455555556667778877 46899999999999888888887776655542 14689999999998888887
Q ss_pred hhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 77 AFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 77 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
++.++..||++++.+. +++ ++.
T Consensus 188 ~~~~~~~~e~~~~~~~---~~~-------------~~~------------------------------------------ 209 (437)
T TIGR00792 188 IICFFGTKERYSEIPK---NIE-------------KKL------------------------------------------ 209 (437)
T ss_pred HHHHcCCEecCCCCCc---ccc-------------cCC------------------------------------------
Confidence 7777777665422110 000 000
Q ss_pred HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCC
Q psy11734 157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGL 236 (817)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~ 236 (817)
+.++.++++++||+++...+..++.....+....+.+.|.++.++
T Consensus 210 ----------------------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 254 (437)
T TIGR00792 210 ----------------------------------SLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG- 254 (437)
T ss_pred ----------------------------------CHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-
Confidence 012236788999999988888888888887777777777766555
Q ss_pred cccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHH
Q psy11734 237 SVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAF 316 (817)
Q Consensus 237 s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 316 (817)
+..+.+.+.....++.+++.++.++++||+|+|+. ...+..+..++...+.+..++.....+...+.+++
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 324 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKIL----------FAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFG 324 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHH
Confidence 45566667777789999999999999999998875 55666666666555554433434444444445555
Q ss_pred hhhccccccccccccC--------CCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 317 MGFCYASIRVNPIDLS--------PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 317 ~g~~~~~~~~~~~~~~--------p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.+...+...+...|.. ++.+|+++|+.++...+|+++++.+.|.+.|..|
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 325 QNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 5555555555554432 3568999999999999999999999999998865
No 184
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.64 E-value=1.8e-13 Score=152.60 Aligned_cols=405 Identities=15% Similarity=0.082 Sum_probs=259.4
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH----HhhcCcccchhhHHHHHH
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF----FIARDILSRTNVRKVFAT 283 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk----~g~r~~~~~~~~~~~~~~ 283 (817)
.....+....++.....+.+.|+++ .|.+..+.+.+.....+.+++..++.|+++|| +||||. ++.
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp---------~il 78 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP---------FIA 78 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH---------HHH
Confidence 3334444455666667778888876 79999999999999999999999999999994 888876 355
Q ss_pred HHhHHHHHHHHhhhccCCC-------------h---hHHHHHHHHHHHHhhhccccccccccccCC-Cch--hHHHHHHH
Q psy11734 284 LGAVLPGVGALAASYVGCN-------------T---SMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTIMALSN 344 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~--g~a~g~~~ 344 (817)
.+.....+++.++.+..+. . ......+.+..+......+...+...|..| ++| +.++++.+
T Consensus 79 ~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~ 158 (477)
T TIGR01301 79 AGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFS 158 (477)
T ss_pred HHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHH
Confidence 5566666666666553321 0 122222333344555555556777888666 443 68999999
Q ss_pred hhhhhcccccccccceec--ccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHH
Q psy11734 345 GLGCVSGMVAPLTVGFLT--QNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLA 422 (817)
Q Consensus 345 ~~~~lg~~~~~~i~g~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~ 422 (817)
.+..+|+.+|+.+.+... +..+- . ... ..+....+++..|++.+++
T Consensus 159 ~~~~lG~ilg~~~g~~~~~~~~~~~-~--------------------------~~~-----~~~~~~~~~~~~F~i~a~~ 206 (477)
T TIGR01301 159 FFMAIGNVLGYAAGAYSGLYKIFPF-T--------------------------KTE-----ACGVSCANLKSCFLIDIIL 206 (477)
T ss_pred HHHHHHHHHHHHHHHHHhHHHhccc-c--------------------------ccc-----ccccccchHHHHHHHHHHH
Confidence 999999999999888642 11110 0 000 0000123799999999999
Q ss_pred HHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCc
Q psy11734 423 LVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNH 502 (817)
Q Consensus 423 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (817)
.+++.+...+..||++...+++..+.
T Consensus 207 l~i~~l~t~~~v~E~~~~~~~~~~~~------------------------------------------------------ 232 (477)
T TIGR01301 207 LAILTYIALSAVKENPLIGSDDFINS------------------------------------------------------ 232 (477)
T ss_pred HHHHHHHHeeeeeccCCCccccchhh------------------------------------------------------
Confidence 99999998888777543211110000
Q ss_pred eeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHH
Q psy11734 503 TVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVL 582 (817)
Q Consensus 503 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~ 582 (817)
+++ +.+-... +. .+.+
T Consensus 233 -----~~~----~~~~~~~-----------------------------~~----------------~~~~---------- 248 (477)
T TIGR01301 233 -----EAA----PPSKHGE-----------------------------EA----------------FFGE---------- 248 (477)
T ss_pred -----hcc----cccccch-----------------------------hh----------------hHHH----------
Confidence 000 0000000 00 0000
Q ss_pred HHHHhhhcccCchhHHhhc-CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHH-HhCCCh------hHH---H-HHHHHHHH
Q psy11734 583 RFLEGVGEDLETPWAAILS-SLPVWSLIISEVGHDYGFYLISSDLPKYMSQ-VIGLSV------AEN---G-VLSALPFL 650 (817)
Q Consensus 583 R~l~Gig~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~-~~g~s~------~~~---~-~~~~~~~~ 650 (817)
-++.+.+ -|..+.+++..++.-.+.+.+..|.+.|+.+ ++|-++ ++. | +......+
T Consensus 249 ------------i~~~~~~mP~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~ 316 (477)
T TIGR01301 249 ------------LFGAFKYLPRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSV 316 (477)
T ss_pred ------------HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHH
Confidence 0111111 3678899999999999999999999999884 555432 122 2 23334555
Q ss_pred HHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC---c-----------------hHHHHHHH
Q psy11734 651 IMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC---N-----------------TSMVAICF 710 (817)
Q Consensus 651 ~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~---~-----------------~~~~~~~~ 710 (817)
...+.+++..++.+|+|+|+.. -..+.++.+++++...+... + .+..+..+
T Consensus 317 ~~~i~s~~l~~l~~~~g~~k~~---------~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 387 (477)
T TIGR01301 317 VLGITSIGMEKLCRGWGAGKRL---------WGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVF 387 (477)
T ss_pred HHHHHHHHHHHHHHHhccchhH---------HHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHH
Confidence 5567777888888888853221 14665666666666554321 0 25556666
Q ss_pred HHHHHHHhhhhhhhhhhccccCC---CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHH
Q psy11734 711 TIGMAFMGFCYASIRVNPIDLSP---NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVF 787 (817)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~ 787 (817)
...++.....++..++..++..+ +..|..+|+.|.+-.+.+.+.....|.+.+..|. +-..++.+.++..+++.+.
T Consensus 388 ~~~Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii~sl~~g~~~~~~g~-~~~~~~~~~gv~~~~aa~~ 466 (477)
T TIGR01301 388 AILGIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQIIVSLGSGPWDQLFGG-GNLPAFVVGAVAAFVSGLL 466 (477)
T ss_pred HHhhHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHcCC-CCeeHHHHHHHHHHHHHHH
Confidence 66777777777777777776655 4569999999999999999999999987666653 3456788888888888887
Q ss_pred HHHhccC
Q psy11734 788 FVLFGSG 794 (817)
Q Consensus 788 ~~~~~~~ 794 (817)
.++..++
T Consensus 467 ~~~~~~~ 473 (477)
T TIGR01301 467 ALILLPR 473 (477)
T ss_pred HHHhCCC
Confidence 7766433
No 185
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.63 E-value=9.9e-16 Score=170.76 Aligned_cols=283 Identities=11% Similarity=0.090 Sum_probs=189.8
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|++.+...|....+..|.- +++++..|......++|.++||.+++.+.+ .+||++|++.+.+.++..++.+.
T Consensus 106 ~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~--~~~~~~f~~~~~~~~~~~~~~~~ 181 (396)
T TIGR00882 106 GLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGCVGWALCASIAGILFS--IDPQIVFWLGSGFALILMLLLMF 181 (396)
T ss_pred HHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcccHHHHHHHHHhhhhc--cCchHHHHHHHHHHHHHHHHHHH
Confidence 45566667767777766666642 445667788888889999999999998876 59999999998888877666555
Q ss_pred eeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHH
Q psy11734 82 LCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLST 161 (817)
Q Consensus 82 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (817)
..|++|+++ +.++. .+ .++
T Consensus 182 ~~~~~~~~~------~~~~~----~~---~~~------------------------------------------------ 200 (396)
T TIGR00882 182 AKPKAPSSA------TVANA----LG---ANA------------------------------------------------ 200 (396)
T ss_pred hCCCCchhh------hhhcc----cc---ccc------------------------------------------------
Confidence 444332211 00000 00 000
Q ss_pred HHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh---CCcc
Q psy11734 162 ALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI---GLSV 238 (817)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~---g~s~ 238 (817)
++++..+.++++|||+++...+..++....+.....+.|.|+++.+ +.+.
T Consensus 201 ---------------------------~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~ 253 (396)
T TIGR00882 201 ---------------------------SAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGT 253 (396)
T ss_pred ---------------------------CCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccch
Confidence 0011234678999999887777766666666666678888888754 4555
Q ss_pred cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhh
Q psy11734 239 AENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMG 318 (817)
Q Consensus 239 ~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g 318 (817)
...|.......+...++.+..|++.||.++|+. ...+..+..+........+ +.+.......+.+.+..
T Consensus 254 ~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~----------l~~~~~l~~l~~~~~~~~~-~~~~~~~~~~l~g~~~~ 322 (396)
T TIGR00882 254 RVFGYVTTMGELLNALIMFCAPLIINRIGAKNA----------LLIAGTIMSVRIIGSSFAT-TALEVVILKMLHAFEVP 322 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchh----------HHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHH
Confidence 667888888888999999999999999999986 5666666666555544433 44333333333333332
Q ss_pred hcccccccccccc-CCCchhHHHHH-HHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734 319 FCYASIRVNPIDL-SPNFSGTIMAL-SNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA 396 (817)
Q Consensus 319 ~~~~~~~~~~~~~-~p~~~g~a~g~-~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (817)
........+..+. +++.++++.+. .+....+|+.+++.+.|.+.|..
T Consensus 323 ~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~------------------------------- 371 (396)
T TIGR00882 323 FLLVGCFKYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSI------------------------------- 371 (396)
T ss_pred HHHHHHHHHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhc-------------------------------
Confidence 2222222333443 44677777766 67889999999999999999875
Q ss_pred cccccccccCCccchhHHHHHHHHHHHHHhhhhhee
Q psy11734 397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVL 432 (817)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~ 432 (817)
||+..|.+.+++.+++.++..+
T Consensus 372 --------------G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 372 --------------GFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred --------------ccHHHHHHHHHHHHHHHHHHHH
Confidence 5899999998888877766543
No 186
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.63 E-value=5.6e-14 Score=164.25 Aligned_cols=286 Identities=13% Similarity=0.082 Sum_probs=190.7
Q ss_pred HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC--------
Q psy11734 229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-------- 300 (817)
Q Consensus 229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 300 (817)
-+++.++++..+.|++.+...++.+++.++.|++.||.+||+. +..+.++.+++.++.....
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~----------i~~g~ll~~lg~ll~alphf~~~~y~~ 127 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIV----------IGIGCAIMGLGSFLLSLPHFLSGRYSY 127 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceE----------EEecHHHHHHHHHHHhChHHhcCCccc
Confidence 3455589999999999999999999999999999999999987 6677777777666654331
Q ss_pred -----------------------------------------C-ChhHHHHHHHHHHHHhhhccccccccccccCC-Cchh
Q psy11734 301 -----------------------------------------C-NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSG 337 (817)
Q Consensus 301 -----------------------------------------~-~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g 337 (817)
. .+...++.-++.+.+.+...+....++.|..| ++|+
T Consensus 128 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~ 207 (633)
T TIGR00805 128 STTVSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSP 207 (633)
T ss_pred cccccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccH
Confidence 0 01122333444444455555666778888666 7899
Q ss_pred HHHHHHHhhhhhcccccccccceecccccccCCCCCCC-CCccchhhcccCccccccccccccccccccCC-ccchhHHH
Q psy11734 338 TIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK-TLSEWRVV 415 (817)
Q Consensus 338 ~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 415 (817)
...|+.+....+|.++|+.+.+.+.+...++...+.++ ..++ ++. ...+|+..
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~-------------------------~dprWiGaWwl~ 262 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTP-------------------------TDPRWIGAWWIG 262 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCC-------------------------CCccHHHHHHHH
Confidence 99999999999999999999999887654332111000 0000 000 11248888
Q ss_pred HHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCC
Q psy11734 416 FWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCF 495 (817)
Q Consensus 416 f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (817)
|++.+++.++..+..++++|+.++...+...+.. .+ +
T Consensus 263 Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~~~~~----------------------------~~-----~---------- 299 (633)
T TIGR00805 263 FLICGGVALLTSIPFFFFPKALPKEGKRVNVDVH----------------------------ET-----E---------- 299 (633)
T ss_pred HHHHHHHHHHHHHHHHhCccccCCcccccchhhh----------------------------hh-----h----------
Confidence 9988888777666666665543322110000000 00 0
Q ss_pred CCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc
Q psy11734 496 PNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG 575 (817)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s 575 (817)
..+ . .+++ +. ++.+ .+ . . +
T Consensus 300 -~~~--~-~~~~--~~--~~~~--------------------------------~~------------------~-~--~ 318 (633)
T TIGR00805 300 -KLE--K-SEDK--SR--KKNS--------------------------------DI------------------T-K--D 318 (633)
T ss_pred -ccc--c-cccc--cc--hhhh--------------------------------hh------------------H-H--H
Confidence 000 0 0000 00 0000 00 0 0 0
Q ss_pred hHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH-HHHH
Q psy11734 576 PVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL-IMWL 654 (817)
Q Consensus 576 ~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~~i 654 (817)
+ ...+++++++|.++...+..++.....+++.+|+|.|+++++|+++.+++.+.....+ +.++
T Consensus 319 ~----------------~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~v 382 (633)
T TIGR00805 319 F----------------PKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGL 382 (633)
T ss_pred H----------------HHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHH
Confidence 0 1235789999999999999999999999999999999999999999999999887776 6789
Q ss_pred HHHHHHHHHhhhhcc
Q psy11734 655 VSMSSSALADYLIVR 669 (817)
Q Consensus 655 g~~~~g~l~dr~g~~ 669 (817)
|.+++|+++||++.+
T Consensus 383 G~~l~G~l~~r~~~~ 397 (633)
T TIGR00805 383 GYLIGGFIMKKFKLN 397 (633)
T ss_pred HHhhhhheeeeeccc
Confidence 999999999999854
No 187
>PRK11462 putative transporter; Provisional
Probab=99.62 E-value=1.1e-13 Score=156.62 Aligned_cols=356 Identities=10% Similarity=0.006 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH
Q psy11734 212 EVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV 291 (817)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~ 291 (817)
-+..+.....+..|++.|+.++.|.++..+|.+.+..-+...+.-++.|+++||...|. +.|+..+..+....++
T Consensus 18 ~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~-----Gr~rp~il~g~i~~~i 92 (460)
T PRK11462 18 DAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRW-----GKFRPWVLFGALPFGI 92 (460)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCC-----CCcchhHhHHHHHHHH
Confidence 33445556666788999999999999999999999999999999999999999853321 1233357777666666
Q ss_pred HHHhhhccCC-C----hhHHHHHHHHHHHHhhhccccccccccccCC--CchhHHHHHHHhhhhhcccccccccceeccc
Q psy11734 292 GALAASYVGC-N----TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 364 (817)
Q Consensus 292 ~~~~~~~~~~-~----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~ 364 (817)
++.++...++ + ..+..+...+...+.........+...+..+ ++|++.++.......+|+.+++.+...+.+.
T Consensus 93 ~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~ 172 (460)
T PRK11462 93 VCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNL 172 (460)
T ss_pred HHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666554432 1 1222222222333333444444556666544 7999999999999999888887776655544
Q ss_pred ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCC
Q psy11734 365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES 444 (817)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (817)
.|+ +....+|.....+.+++.+++..+.....||+.++.+ +
T Consensus 173 ~g~--------------------------------------~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~~~-~ 213 (460)
T PRK11462 173 IGG--------------------------------------DNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEAPP-T 213 (460)
T ss_pred hCC--------------------------------------CchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCCCc-c
Confidence 321 0012368877777777666665554443333221100 0
Q ss_pred CCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHH
Q psy11734 445 ILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQG 524 (817)
Q Consensus 445 ~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g 524 (817)
+. +
T Consensus 214 ----------------------------------------------------------------------~~--~----- 216 (460)
T PRK11462 214 ----------------------------------------------------------------------TT--S----- 216 (460)
T ss_pred ----------------------------------------------------------------------CC--C-----
Confidence 00 0
Q ss_pred HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHh
Q psy11734 525 VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLP 604 (817)
Q Consensus 525 ~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~ 604 (817)
+ ++.++..++||.
T Consensus 217 ---------------------------------------------~----------------------~~~l~~~~~Nk~ 229 (460)
T PRK11462 217 ---------------------------------------------M----------------------REDLRDIWQNDQ 229 (460)
T ss_pred ---------------------------------------------H----------------------HHHHHHHhCChH
Confidence 0 012456778888
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHH
Q psy11734 605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATL 684 (817)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~ 684 (817)
++.+....++..............|.+...|. ....+.+.....++++++.+++++++||+++|+.. ..
T Consensus 230 ~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk~~~----------~~ 298 (460)
T PRK11462 230 WRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTYCVGNLIGSALAKPLTDWKCKVTIF----------WW 298 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHH----------HH
Confidence 87776666666665555555555555555554 33445566677889999999999999999987642 11
Q ss_pred HHHHHHHHHHHHHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHhHHH
Q psy11734 685 GAVLPGVGALAASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAP 755 (817)
Q Consensus 685 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~i~p 755 (817)
+..+..+..+++.+.+. +........++.+.+.+...+..+....|... +.-|...+..++...+|..+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~ 378 (460)
T PRK11462 299 TNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGG 378 (460)
T ss_pred HHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHH
Confidence 22222222222222222 22223333333444444444444444544332 3346666777899999999999
Q ss_pred HHHHHhhcCCc
Q psy11734 756 LTVGFLTQNKT 766 (817)
Q Consensus 756 ~~~g~~~~~~g 766 (817)
.+.|.+.+..|
T Consensus 379 ~i~g~iL~~~G 389 (460)
T PRK11462 379 ALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHcC
Confidence 99998887643
No 188
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.61 E-value=4.6e-15 Score=165.42 Aligned_cols=255 Identities=13% Similarity=0.120 Sum_probs=176.3
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc------------------------
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF------------------------ 57 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~------------------------ 57 (817)
|++.|+|.|...+....++.+..|+|+|++++++.+...++|..+||.+++.+...
T Consensus 101 ~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (410)
T TIGR00885 101 LFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHS 180 (410)
T ss_pred HHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHH
Confidence 78899999999999999999999999999999999999999999999999887540
Q ss_pred -ccCcchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhh
Q psy11734 58 -TASWANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTL 136 (817)
Q Consensus 58 -~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (817)
..+||++|++.+.+.++..++..+ .+ .|+.++ +++++ . +
T Consensus 181 ~~~~w~~~fl~~a~~~~~~~~~~~~-~~-~p~~~~--~~~~~--------~------~---------------------- 220 (410)
T TIGR00885 181 DLASVQTPYMIIGAVVLAVALLIML-TK-MPALNH--SDAKQ--------I------S---------------------- 220 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-hc-CCCCCc--ccccc--------c------c----------------------
Confidence 136999999998877766544432 22 232111 00000 0 0
Q ss_pred ccccccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHH
Q psy11734 137 THIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHD 216 (817)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~ 216 (817)
...+.++++|+|+++...+..++..
T Consensus 221 -------------------------------------------------------~~~~~~~~~~~~~~~~~~l~~f~yv 245 (410)
T TIGR00885 221 -------------------------------------------------------FSASLSRLARIRHYREGVIAQFFYV 245 (410)
T ss_pred -------------------------------------------------------chhhHHHHHhChhHHHHHHHHHHHH
Confidence 0113457889999998888888877
Q ss_pred HHHHHHhhchhhHHHHhh-CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHh
Q psy11734 217 YGLYLISTDLPKYMSEVI-GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALA 295 (817)
Q Consensus 217 ~~~~~~~~~~p~~l~~~~-g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (817)
....+...+++.|.++.. +.+...++........+..+|+++++++.||+++|+. ......+..+..++
T Consensus 246 g~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~----------l~i~~~~~~~~~ll 315 (410)
T TIGR00885 246 GVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKV----------LMAYAIIGMALCLG 315 (410)
T ss_pred HHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHH----------HHHHHHHHHHHHHH
Confidence 777788889999997632 3343444545555667889999999999999998875 55555555555555
Q ss_pred hhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhH-HHHHHHhhhhhcccccccccceecccc
Q psy11734 296 ASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGT-IMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 296 ~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~-a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
....+ +... ...+.+.+++....+|.......+..+|+..+ +.++.... +|+++.|.+.|.+.|..
T Consensus 316 ~~~~~-~~~~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~~--~Gga~~p~l~G~~~d~~ 382 (410)
T TIGR00885 316 SIFAG-GHVG-LYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMAI--IGGGIVPPLQGFIIDMK 382 (410)
T ss_pred HHHcC-ChHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHHH--hccchHHHHHHHHHHHh
Confidence 55544 3333 33333444555555566655555555544433 44444433 99999999999999964
No 189
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.60 E-value=1e-13 Score=151.05 Aligned_cols=361 Identities=11% Similarity=0.062 Sum_probs=263.6
Q ss_pred HHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH
Q psy11734 213 VGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG 292 (817)
Q Consensus 213 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~ 292 (817)
+..+..+.....|+..|++++.|.++..+|.+....=+..++.-++.|.++||..+|. +.|+.++..+.+..++.
T Consensus 22 ~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~-----GrfRP~lL~g~ip~~i~ 96 (467)
T COG2211 22 FASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRW-----GRFRPWLLWGAIPFAIV 96 (467)
T ss_pred hHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeeccccccc-----ccccHHHHHHhHHHHHH
Confidence 3345566667789999999999999999999999999999999999999999865443 33555677776666666
Q ss_pred HHhhhccCC-----ChhHHHHHHHHHHHHhhhccccccccccccC--CCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 293 ALAASYVGC-----NTSMVAIFFTIGMAFMGFCYASIRVNPIDLS--PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 293 ~~~~~~~~~-----~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~--p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..++...++ +.....+...+...+.........+...+.. |++|.+..+....+..+|+.+...+.+.+.+..
T Consensus 97 ~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~ 176 (467)
T COG2211 97 AVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLF 176 (467)
T ss_pred HHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 666655542 2444444444445445454444555665544 579999999999999999888888877777665
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCC
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESI 445 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 445 (817)
+. +....+|+..-.+.+++..+..+..++-.||+..+..+..
T Consensus 177 g~--------------------------------------~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~ 218 (467)
T COG2211 177 GG--------------------------------------GDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTK 218 (467)
T ss_pred CC--------------------------------------CcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCc
Confidence 41 1124578888888888888777777776666543211110
Q ss_pred CchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHH
Q psy11734 446 LPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGV 525 (817)
Q Consensus 446 ~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~ 525 (817)
. +.+.+.
T Consensus 219 ~--------------------------------------------------------------------~~~~~~----- 225 (467)
T COG2211 219 T--------------------------------------------------------------------GVKLKL----- 225 (467)
T ss_pred c--------------------------------------------------------------------cccccH-----
Confidence 0 000000
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhH
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPV 605 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~ 605 (817)
+..+..+++||++
T Consensus 226 -------------------------------------------------------------------~~~~~~~~~Nrp~ 238 (467)
T COG2211 226 -------------------------------------------------------------------KDSFLLIFKNRPL 238 (467)
T ss_pred -------------------------------------------------------------------HHHHHHHHccchH
Confidence 0123457789999
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHH
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLG 685 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~ 685 (817)
...++..++...+..-..+....|.+.++|.+.............+.+++.++..++++|+|+|+.. .++
T Consensus 239 ~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~----------~~~ 308 (467)
T COG2211 239 LLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLF----------LIG 308 (467)
T ss_pred HHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHH----------HHH
Confidence 9998888888888888888899999888888888887787778888888899999999999998764 466
Q ss_pred HHHHHHHHHHHHhhcCc-hHHHHHHHHHHHHHHhhhhhhhhhhccccCC--------CchHHHHHHHHHHHHHHHhHHHH
Q psy11734 686 AVLPGVGALAASYVGCN-TSMVAICFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPL 756 (817)
Q Consensus 686 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~g~~~g~~~~~~~~g~~i~p~ 756 (817)
.++..++.+++.+.+.+ .+..++..++...+.+...+..++..+|... |.-|...|.+.+++-+|.+++..
T Consensus 309 ~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~ 388 (467)
T COG2211 309 LLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGF 388 (467)
T ss_pred HHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 77777777766666533 3455555567777777888888888877542 45799999999999999999999
Q ss_pred HHHHhhcCCc
Q psy11734 757 TVGFLTQNKT 766 (817)
Q Consensus 757 ~~g~~~~~~g 766 (817)
+.|++.+..|
T Consensus 389 ~~g~~L~~~G 398 (467)
T COG2211 389 IPGWILGAIG 398 (467)
T ss_pred HHHHHHHHcC
Confidence 9999988764
No 190
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.59 E-value=9.1e-15 Score=166.17 Aligned_cols=307 Identities=13% Similarity=0.093 Sum_probs=170.5
Q ss_pred cccccCCcccccchhhhhhhhccCCC--CcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPN--ERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~--~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~ 79 (817)
|+++|+|.|...|...++++|.||++ ||+++.++++.+.++|..+||.+++++.+ +.|||++|++.++ +++..++.
T Consensus 112 ~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~-~~gw~~~F~i~~i-~~~~~~~~ 189 (489)
T PRK10207 112 LGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIAD-KFGYSVTYNLCGA-GLIIALLV 189 (489)
T ss_pred HHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHH-hhChHHHHHHHHH-HHHHHHHH
Confidence 78999999999999999999999887 45889999999999999999999999999 9999999999643 55555555
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
+...++..++.+..+++ ++.|+... .+ +..+............++. +.........
T Consensus 190 ~~~~~~~~~~~~~~~~~-----------------~~~d~~~~---~l---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 245 (489)
T PRK10207 190 YFACRGMVKDIGSEPDH-----------------KPMSFSKL---LL---VLLGSVVMIFVCAWLMHNV-EVANLVLIVL 245 (489)
T ss_pred HHHcchhhcccCCCCCc-----------------cchhhhhH---HH---HHHHHHHHHHHHHHHHhhh-hHHHHHHHHH
Confidence 44444322111000000 00111110 00 0000000000000000100 0000000000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH--HHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS--EVGHDYGLYLISTDLPKYMSEVIGLS 237 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~--~~~~~~~~~~~~~~~p~~l~~~~g~s 237 (817)
...... .++.. +.+ . .+++|+|.+..+.+. ..+....+....+.+|.+.++..+.
T Consensus 246 ~~i~~~-----------------~f~~~-~~~-~---~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~~~~~~~- 302 (489)
T PRK10207 246 SIVVTI-----------------IFFRE-AFK-L---DKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFAINNVHH- 302 (489)
T ss_pred HHHHHH-----------------HHHHH-Hhc-C---CHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHhccc-
Confidence 000000 01111 111 1 167788876554432 3333444444557788888753333
Q ss_pred ccccch------hhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhh-----hcc----CCC
Q psy11734 238 VAENGV------LSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAA-----SYV----GCN 302 (817)
Q Consensus 238 ~~~ag~------~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~----~~~ 302 (817)
...|+ +.....+..++.+++.+++.||.++|+.-..+..+ ...|+++.+++++.+ ... ..+
T Consensus 303 -~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k---~~~G~~l~~~~~~~~~~~~~~~~~~~~~~s 378 (489)
T PRK10207 303 -EILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMK---FTLGMFLCSLGFLTAAAAGMWFADAQGLTS 378 (489)
T ss_pred -cccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHH---HHHHHHHHHHHHHHHHHHHHhhcCCCCccC
Confidence 23333 33334566778888999999999988631111111 334444444444321 111 113
Q ss_pred hhHHHHHHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhccccccccccee
Q psy11734 303 TSMVAIFFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFL 361 (817)
Q Consensus 303 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l 361 (817)
.++......+.+.+-+...+.......+ .+++.+|.++|+.++.+++|+.++..+.+..
T Consensus 379 ~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~~~~ 438 (489)
T PRK10207 379 PWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVATFT 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444455555555565666655554544 5558999999999999999999988776543
No 191
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.59 E-value=3.6e-13 Score=150.81 Aligned_cols=334 Identities=12% Similarity=0.015 Sum_probs=183.6
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV 287 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~ 287 (817)
..+..++.+..+-.....++.++++++|+|..+.|++.....++..++++..|+++||+|+||. .+..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~---------~~~~~~~ 77 (418)
T TIGR00889 7 LKFMSFLQWFIWGSWLVTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQK---------VYAVCHF 77 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH---------HHHHHHH
Confidence 4455566666666666788999998889999999999999999999999999999999976442 1445555
Q ss_pred HHHHHHHhhhccCCChhHHHHHHHHHHHHhhhcccccccc----cc----ccCC-CchhHHHHHHHhhhhhccccccccc
Q psy11734 288 LPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVN----PI----DLSP-NFSGTIMALSNGLGCVSGMVAPLTV 358 (817)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~----~~----~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~ 358 (817)
+..+......+.+ +.+.......+.+.......+..... .. |... ..+.+..| .+|.+++|.+.
T Consensus 78 ~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~ 150 (418)
T TIGR00889 78 AGALLLFFAAQVT-TPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAV 150 (418)
T ss_pred HHHHHHHHHHHhc-CHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHH
Confidence 5545444444433 33333333333333322222222111 11 2111 12323332 35667777776
Q ss_pred ceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 359 GFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 359 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
|.+ +.. ..|. .|++.+++.++..++..+.++.++
T Consensus 151 g~l-~~~--------------------------------------------~~~~-~f~~~~~~~~~~~~~~~~~~e~~~ 184 (418)
T TIGR00889 151 SLL-DIE--------------------------------------------LSNI-QLYITAGSSALLGVFALTLPDIPV 184 (418)
T ss_pred HHh-ccc--------------------------------------------chhH-HHHHHHHHHHHHHHHHhcCCCCCC
Confidence 654 111 0232 455666655555554444443321
Q ss_pred ccccC-CC-Cc---hhH-HH-----HHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeec
Q psy11734 439 QYWNE-SI-LP---ARY-VL-----GIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSK 507 (817)
Q Consensus 439 ~~~~~-~~-~~---~~~-~i-----l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 507 (817)
++.++ .. .+ ... .+ ++...+..++............|...+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------- 236 (418)
T TIGR00889 185 AKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLH---------------------------- 236 (418)
T ss_pred CccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHH----------------------------
Confidence 11111 00 00 000 00 011111111111111111111122222
Q ss_pred ccccccccc--------cCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc--chH
Q psy11734 508 TYTTLDAKF--------DWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS--GPV 577 (817)
Q Consensus 508 ~~~~~~~~~--------~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~--s~~ 577 (817)
|. |++.++.+...++..++..+++++.|++.||+|||+++..+.++.+++.++....++. +.+
T Consensus 237 -------~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~ 309 (418)
T TIGR00889 237 -------EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYA 309 (418)
T ss_pred -------HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHH
Confidence 22 2345778999999999999999999999999999999999999998887777664300 112
Q ss_pred HHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHH----HHHH-HHHHHHH
Q psy11734 578 SMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAEN----GVLS-ALPFLIM 652 (817)
Q Consensus 578 ~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~----~~~~-~~~~~~~ 652 (817)
.+++.+++.|++ ........+.+..+. .++..- +... ....++.
T Consensus 310 ~l~l~~~l~g~~-----------------------------~~~~~~~~~~~i~~~--~p~~~~g~~~g~~~~~~~~lg~ 358 (418)
T TIGR00889 310 LLFLSMIVYGCA-----------------------------FDFFNISGSVFVEKE--VPVHIRASAQGLFTLMCNGFGS 358 (418)
T ss_pred HHHHHHHHHHHH-----------------------------HHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHhhHH
Confidence 233333333332 222222334444443 233222 2332 3345788
Q ss_pred HHHHHHHHHHHhhhhcc
Q psy11734 653 WLVSMSSSALADYLIVR 669 (817)
Q Consensus 653 ~ig~~~~g~l~dr~g~~ 669 (817)
.+|.+++|++.|+.|.+
T Consensus 359 ~iGp~l~G~l~~~~g~~ 375 (418)
T TIGR00889 359 LLGYILSGVMVEKMFAY 375 (418)
T ss_pred HHHHHHHHHHHHHhccc
Confidence 99999999999998753
No 192
>KOG0255|consensus
Probab=99.58 E-value=4e-13 Score=155.35 Aligned_cols=255 Identities=17% Similarity=0.143 Sum_probs=181.0
Q ss_pred CCCCCCCCCceeeeccccccc---ccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHH
Q psy11734 493 SCFPNANGNHTVVSKTYTTLD---AKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTP 569 (817)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~---~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~ 569 (817)
.+..|.+++.++.+....++. +.++.+.....+..+++.+|..+|++++|+++||+|||+++..++++..++.++++
T Consensus 87 ~~~~~~~~~~~~~~~~~~s~~~~~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a 166 (521)
T KOG0255|consen 87 VIVICLDGWVYDYGSSVYSIVSEWNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTA 166 (521)
T ss_pred ccccccceeEecCCCCcccccchhceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHH
Confidence 346778888877776555444 45567889999999999999999999999999999999999999999999999999
Q ss_pred HhhhcchHHHHHHHHHHhhhcc----------------------------------------------------------
Q psy11734 570 LIAHSGPVSMTVLRFLEGVGED---------------------------------------------------------- 591 (817)
Q Consensus 570 ~a~~~s~~~l~~~R~l~Gig~~---------------------------------------------------------- 591 (817)
+++ |++.+++.|+++|++.+
T Consensus 167 ~a~--~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~~~~~~~~~a~~~~~Wr~~~~~~~~~~ 244 (521)
T KOG0255|consen 167 FAP--NYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTLGGFFFVGGLMLPAGAAYITRDWRWLFWIISIPS 244 (521)
T ss_pred HhC--cHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 999 99999999999999999
Q ss_pred ----------------------------------c-----C-----------------------chhHHhhcCHhHHHHH
Q psy11734 592 ----------------------------------L-----E-----------------------TPWAAILSSLPVWSLI 609 (817)
Q Consensus 592 ----------------------------------~-----~-----------------------~~~~~~l~~~~~~~~~ 609 (817)
+ . ..+.++++.|+.....
T Consensus 245 ~~~~~~~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~ 324 (521)
T KOG0255|consen 245 GLFLLLWFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRT 324 (521)
T ss_pred HHHHHHHHccCcChHHHHHcCchHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHH
Confidence 0 0 0112233333221111
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734 610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP 689 (817)
Q Consensus 610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 689 (817)
+... ..+..+.+..+.-.+....+|.+.. ......+.....+....+...||.|||.. ...+..+.
T Consensus 325 ~~~~-~~~~~~~~~y~gl~~~~~~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~ 390 (521)
T KOG0255|consen 325 LYLL-FIWFVFSLVYYGLSLNVSGLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLA 390 (521)
T ss_pred HHHH-HHHHHHhHHHHhhhhhhhhcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHH
Confidence 1111 1111122222222222222344432 33344445777777888999999986643 46778887
Q ss_pred HHHHHHHHhhcCchH--HHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 690 GVGALAASYVGCNTS--MVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 690 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
.++++...+...... .......++.++.+..+........|..| ..|..+.+..+....+++.++|.+.-....
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 391 GIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 888888777653333 45555566666666667777889999999 679999999999999999999999765544
No 193
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.57 E-value=1.8e-14 Score=163.39 Aligned_cols=259 Identities=15% Similarity=0.128 Sum_probs=192.3
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCIL 82 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~ 82 (817)
++.|++.+...|.-.+++.+..|+||..++.++.+...+++.++||.++|.++. ..|=.++|.++++.-++.... ...
T Consensus 111 fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva-~~G~~~~f~inalsfl~~i~~-l~~ 188 (524)
T PF05977_consen 111 FLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVA-FFGAAAAFLINALSFLISILA-LLR 188 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHH-HHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 456888888899999999999999999999999999999999999999999999 889999999987644443333 222
Q ss_pred eccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHH
Q psy11734 83 CFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTA 162 (817)
Q Consensus 83 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (817)
.|.+++ ++..+ +|+ ...+
T Consensus 189 ~~~~~~-~~~~~-~e~--~~~~---------------------------------------------------------- 206 (524)
T PF05977_consen 189 WKPPPP-PSSLP-RER--FFSA---------------------------------------------------------- 206 (524)
T ss_pred cccccc-ccccc-hhh--hhhh----------------------------------------------------------
Confidence 222111 11111 110 0000
Q ss_pred HHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccc
Q psy11734 163 LLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENG 242 (817)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag 242 (817)
.+..++.+.++|......+..++.+.....+...+|.+.++.+|.++...|
T Consensus 207 -----------------------------l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yG 257 (524)
T PF05977_consen 207 -----------------------------LREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYG 257 (524)
T ss_pred -----------------------------HHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHH
Confidence 122355566677766666666666655556667799999999999999999
Q ss_pred hhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccc
Q psy11734 243 VLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYA 322 (817)
Q Consensus 243 ~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~ 322 (817)
++....++|.++|+++.+++.+|.++++. +..+.+..+++++.+.+.+ +.+...+.+++.+.+......
T Consensus 258 ll~a~~gvGai~Gal~~~~l~~~~~~~~l----------v~~~~~~~a~~~~~lal~~-~~~~~~~~l~l~G~~~~~~~~ 326 (524)
T PF05977_consen 258 LLLAAFGVGAILGALLLPRLRRRLSSRRL----------VLLASLLFALALLLLALSP-SFWLALIALFLAGAAWIIANS 326 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchh----------hHHHHHHHHHHHHHHhcch-HHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999887775 5666666677666666654 445555555555555555555
Q ss_pred cccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 323 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 323 ~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..++..+...| +.+|+++++.+++...+..+|..+.|.+.|..
T Consensus 327 ~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~ 370 (524)
T PF05977_consen 327 SLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHF 370 (524)
T ss_pred HHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 55566666555 78999999999999999999999999998876
No 194
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.57 E-value=8.5e-13 Score=139.21 Aligned_cols=383 Identities=16% Similarity=0.136 Sum_probs=251.2
Q ss_pred HhhchhhHHHHhhCC---cccc----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734 222 ISTDLPKYMSEVIGL---SVAE----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL 294 (817)
Q Consensus 222 ~~~~~p~~l~~~~g~---s~~~----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (817)
+.+++|.|+++..+- ++.+ .++......+...+-+++.|.++|+.|+||. .......+..++.+
T Consensus 34 tt~ifply~~~~~~~~g~~~~~~~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~---------~~~~f~~i~i~~~~ 104 (438)
T COG2270 34 TTFIFPLYFTSVAGAGGVDPASSTAYWGYASAIAGLLIALLAPILGTIADYPGPRKK---------FFGFFTAIGIISTF 104 (438)
T ss_pred eeehhHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcch---------HHHHHHHHHHHHHH
Confidence 457788898875433 5443 3455666777788889999999999998886 35555666666667
Q ss_pred hhhccCC--ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccc--eecccccccC
Q psy11734 295 AASYVGC--NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVG--FLTQNIISIN 369 (817)
Q Consensus 295 ~~~~~~~--~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g--~l~~~~~~~~ 369 (817)
.+.+.++ +++.....+.+...+........++...++.+ ++.+..+++....+++|+.+.-.+.- .+......
T Consensus 105 ~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~-- 182 (438)
T COG2270 105 LLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTG-- 182 (438)
T ss_pred HHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccc--
Confidence 7766665 34555566666666666666667888887776 56788888777777877765444321 11000000
Q ss_pred CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchh
Q psy11734 370 PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPAR 449 (817)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 449 (817)
.... +.+ .++++.+.-|.++.+.++-.++-.+-.++..++..+.
T Consensus 183 ---------------------~~~~----l~~--l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~--------- 226 (438)
T COG2270 183 ---------------------ITII----LLG--LPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKI--------- 226 (438)
T ss_pred ---------------------eeEE----eec--cCccccccchhHHHHHHHHHHHHHhHHHhcccccccc---------
Confidence 0000 000 1111222344444444443333222222221111100
Q ss_pred HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734 450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA 529 (817)
Q Consensus 450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~ 529 (817)
..+..+
T Consensus 227 -----------------------------------------------------------------~~~~~~--------- 232 (438)
T COG2270 227 -----------------------------------------------------------------SSPPPT--------- 232 (438)
T ss_pred -----------------------------------------------------------------cccchH---------
Confidence 000000
Q ss_pred HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734 530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI 609 (817)
Q Consensus 530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~ 609 (817)
.+.. ++-. ...+++++.+++.+....
T Consensus 233 -----------------------------------~l~~------g~k~-------------L~~t~k~i~~~~~i~~FL 258 (438)
T COG2270 233 -----------------------------------ALRN------GFKE-------------LKSTFKEIRGRKNLVLFL 258 (438)
T ss_pred -----------------------------------HHHH------HHHH-------------HHHHHHHHhcccchHHHH
Confidence 0000 1110 124567888889999999
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHH
Q psy11734 610 ISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLP 689 (817)
Q Consensus 610 ~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~ 689 (817)
++.+++.-+..+.......|-.+.+|++..+...+.....+.+++|++++|++.||+|.|+++ ..+.++.
T Consensus 259 iA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl----------~~~lvi~ 328 (438)
T COG2270 259 IARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVL----------MIGLVIL 328 (438)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceee----------hHHHHHH
Confidence 999999999999999999999989999999999999999999999999999999999999775 3555555
Q ss_pred HHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccc
Q psy11734 690 GVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLL 768 (817)
Q Consensus 690 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~ 768 (817)
.+.++...+.. ..........+.+.+.+..++..-++..+..| ++-++..|+.+..+...+.++|.+.+.+.+.+++
T Consensus 329 ~~~~~~~~~~~-~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~- 406 (438)
T COG2270 329 SIAALYLIFLE-GELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGS- 406 (438)
T ss_pred HHHHHHHHHcc-ccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcc-
Confidence 54444444443 23333333344555555556666677777777 7799999999999999999999999999999865
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhc
Q psy11734 769 EWRVVFWIMFLTLFISNVFFVLFG 792 (817)
Q Consensus 769 ~~~~~~~~~~~~~~i~~~~~~~~~ 792 (817)
-+..+..+.++..++.+...+.+
T Consensus 407 -~r~g~~~i~vll~iGl~~L~~v~ 429 (438)
T COG2270 407 -SRAGVLSIIVLLLIGLLLLLRVK 429 (438)
T ss_pred -hhhHHHHHHHHHHhhHhhEEeec
Confidence 67888888888888887776653
No 195
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.56 E-value=8.7e-14 Score=157.69 Aligned_cols=370 Identities=12% Similarity=0.009 Sum_probs=218.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHh---hcCcccchhhHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFI---ARDILSRTNVRKVF 281 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g---~r~~~~~~~~~~~~ 281 (817)
...+...++..+.. +.....++.++++.+|.|..+.+.+.....+...+-.+ +|.++||++ +|| +..
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rR--------r~~ 97 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTK--------RWY 97 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccc--------hHH
Confidence 44555567777777 77778888899988999999998888888888888555 999999995 222 123
Q ss_pred HHHHhHHH-HHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCc---hhHHHHHHHhhhhhcccccccc
Q psy11734 282 ATLGAVLP-GVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNF---SGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~---~g~a~g~~~~~~~lg~~~~~~i 357 (817)
+..+.++. .+.+..+...++........+.+..++....-........|..+|+ .+...++....+.+|..+++.+
T Consensus 98 l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l 177 (468)
T TIGR00788 98 LVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIRESPSAGPSLVSWMWGASATGGLISSLL 177 (468)
T ss_pred HHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHH
Confidence 44444444 2333333322222223332444444444444444455555544433 3334445555566899999999
Q ss_pred cceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 358 VGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 358 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
.|.+.+.. +|+..|++.+++.++..+...+.+ |+
T Consensus 178 ~G~l~~~~---------------------------------------------~~~~~f~~~a~l~ll~~~~~~~~~-E~ 211 (468)
T TIGR00788 178 GGPLLDKT---------------------------------------------LTRILFLITAALLLLQLFVSNLSK-ER 211 (468)
T ss_pred HHHHHHhc---------------------------------------------CcchHHHHHHHHHHHHHHHHHhcc-cc
Confidence 99887764 589999999888887755444443 32
Q ss_pred cccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeeccccccccccc
Q psy11734 438 VQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFD 517 (817)
Q Consensus 438 ~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 517 (817)
+....++ ..+ .+|.. ...
T Consensus 212 ~~~~~~~--------------------------------~~~------------~~~~~------------------~~~ 229 (468)
T TIGR00788 212 RAFVRPR--------------------------------IGT------------YLEMN------------------MAL 229 (468)
T ss_pred ccccccc--------------------------------ccc------------cchhh------------------hhh
Confidence 1100000 000 00000 000
Q ss_pred CChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhH
Q psy11734 518 WDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWA 597 (817)
Q Consensus 518 ~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~ 597 (817)
.+... .....+ . ..+.+
T Consensus 230 ~~~~~--------------------------------------------~~~~~~--~-----------------~~~l~ 246 (468)
T TIGR00788 230 LTLGV--------------------------------------------LANVKV--Q-----------------ILGLR 246 (468)
T ss_pred hhhhH--------------------------------------------HHHHHH--H-----------------HHHHH
Confidence 00000 000000 0 01234
Q ss_pred HhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccch
Q psy11734 598 AILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 598 ~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~ 676 (817)
+.+++|.++...+..++ +... .+.....-.+.++.+|+++.+.|......+++.+++....+++.+|++.|+.+
T Consensus 247 ~~l~~~~i~~~l~fifl~~~~~-~~~~~~~f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l---- 321 (468)
T TIGR00788 247 GAIQLLEIAKPLIFIFLSYANL-PGASGSVFCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLF---- 321 (468)
T ss_pred HHHhcHHHHHHHHHHHHHHhhc-CCCCceeEEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHH----
Confidence 55677887765554444 2211 11111100123345899999999999999999999999999998888866543
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh---------cCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHH
Q psy11734 677 VRKVFATLGAVLPGVGALAASYV---------GCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGL 746 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~ 746 (817)
.++.++.+++.+..... ..+.+.......+..+..+....+.....++..| +++|+..++.+++
T Consensus 322 ------~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~ 395 (468)
T TIGR00788 322 ------GVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASI 395 (468)
T ss_pred ------HHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHH
Confidence 35555554444332110 0122223333344455555556666677777777 7799999999999
Q ss_pred HHHHHhHHHHHHHHhhcCCc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKT 766 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g 766 (817)
.++|..+++.++|.+.+..|
T Consensus 396 ~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 396 LHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999998875
No 196
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.54 E-value=2.2e-13 Score=147.62 Aligned_cols=284 Identities=14% Similarity=0.102 Sum_probs=193.3
Q ss_pred HHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh-HHHHHHHHHHH
Q psy11734 455 MGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT-QGVILSAFYYG 533 (817)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~-~g~~~s~~~~~ 533 (817)
+|..+++ .--|.+++.+.|++.+ |+|+|++| .|.+.++|..+
T Consensus 32 lC~fGF~--~e~R~n~s~a~p~L~~-----------------------------------elglT~~qv~G~I~s~F~ys 74 (511)
T TIGR00806 32 LCFYGFM--AQFRPGESFITPYLLT-----------------------------------VLNFTEETVTNEIIPVLPYS 74 (511)
T ss_pred HHHHHHH--HHhhchHHHHHHHHHH-----------------------------------HcCCCHHHhcchHHHHHHHH
Confidence 4444433 3458888999988888 99999999 99999999999
Q ss_pred HHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----------------------
Q psy11734 534 YILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---------------------- 591 (817)
Q Consensus 534 ~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---------------------- 591 (817)
|++++++.|.++||+|.|+++.++++.+++.+++.++++ ++..|.+.|++.|+++|
T Consensus 75 Yal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~--Sl~~L~i~R~llGvaEA~~~A~~syI~~WfP~kER~rat 152 (511)
T TIGR00806 75 HLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGT--SVWHMQLMEVFYSVTMAARIAYSSYIFSLVPPSRYQRAA 152 (511)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Confidence 999999999999999999999999999999999999999 99999999999999999
Q ss_pred ------------------------------------------------------------cCc-----------------
Q psy11734 592 ------------------------------------------------------------LET----------------- 594 (817)
Q Consensus 592 ------------------------------------------------------------~~~----------------- 594 (817)
...
T Consensus 153 si~~sg~~vG~~Ia~~L~qll~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~~~~~~~~~~~~~ 232 (511)
T TIGR00806 153 AYSRAAVLLGVFLSSVLGQLLVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGALPCELDQMVPGP 232 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccccccccccccCCCCC
Confidence 000
Q ss_pred ---h------------------hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHH
Q psy11734 595 ---P------------------WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMW 653 (817)
Q Consensus 595 ---~------------------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ 653 (817)
. +++..+||++..-.+=+.+..++++-+..|....-++..+-...--|..-++..+.++
T Consensus 233 ~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga 312 (511)
T TIGR00806 233 GGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGA 312 (511)
T ss_pred ccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHH
Confidence 0 0112344444333333345556666666666666655433112245556667778888
Q ss_pred HHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhc-cccC
Q psy11734 654 LVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNP-IDLS 732 (817)
Q Consensus 654 ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 732 (817)
+..+..|++-.++.+- -...+.+..++.+..++++...+ +.|......++......+..+....-+ ..+.
T Consensus 313 ~~a~~ag~~~~~w~~~--------~~l~l~v~s~~~~gll~~m~~t~-~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~ 383 (511)
T TIGR00806 313 ITSFIAGFVNIRWARW--------SKLLIAVVSAIQAGLVFWMSQSH-DIWVLYVTYVLFRGIYQFLVPIATFQIASSLS 383 (511)
T ss_pred HHHHHHHhhcCCchhh--------HHHHHHHHHHHHHHHhhhhhccc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 8999999986554321 12233344444444455555543 778888888888887777666655433 3344
Q ss_pred CCchHHHHHHHHHHHHHHHhHHHHHH----HHhhcCCcc-ccHHHHHHHHHHHHHHHHH
Q psy11734 733 PNFSGTIMALSNGLGCVSGMVAPLTV----GFLTQNKTL-LEWRVVFWIMFLTLFISNV 786 (817)
Q Consensus 733 ~~~~g~~~g~~~~~~~~g~~i~p~~~----g~~~~~~g~-~~~~~~~~~~~~~~~i~~~ 786 (817)
.+.-|...|+++++.-+-..+-..+. |.-.|...- .-|...|.+++.+.++..+
T Consensus 384 ~~~~aLvFGiNtfvAl~LQtilT~iVvd~~gl~l~i~~Qf~vY~~yf~~~~~i~~~~~~ 442 (511)
T TIGR00806 384 KELCALVFGINTFVATALKTIITAVVSDKRGLGLQVRKQFRIYSVYFLVLSIICFFGAG 442 (511)
T ss_pred ccceEEEEecHHHHHHHHHHheEEEEEcccccCCCceeEEEehhhHHHHHHHHHHHHHH
Confidence 46679999998887766665554442 221111100 1255667777766666544
No 197
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.54 E-value=6.6e-13 Score=142.08 Aligned_cols=165 Identities=13% Similarity=0.066 Sum_probs=127.7
Q ss_pred HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734 598 AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV--IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT 675 (817)
Q Consensus 598 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 675 (817)
+.+|+|+++...+..+++.....+...|.+.|+++. +|+++++++...+.+..+.++|+++++++.||+++++.+
T Consensus 135 ~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l--- 211 (310)
T TIGR01272 135 SAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYL--- 211 (310)
T ss_pred hHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHH---
Confidence 356678888888888998889999999999999864 689999999999999999999999999999999987643
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHH
Q psy11734 676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAP 755 (817)
Q Consensus 676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p 755 (817)
..+..+..++.++....+ +. .....+.+.+++.+..+|...+...+..|++.+++.++. ..+.+|+++.|
T Consensus 212 -------~~~~~l~~~~~~l~~~~~-~~-~~~~~~~l~g~~~s~i~P~~~s~a~~~~~~~~~~asai~-~~~~~Gg~i~P 281 (310)
T TIGR01272 212 -------AFNAFLAVLLSIGAALTH-GY-VAMWFVLALGLFNSIMFPTIFSLALNALGRHTSQGSGIL-CLAIVGGAIVP 281 (310)
T ss_pred -------HHHHHHHHHHHHHHHHcC-CH-HHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHH-HHHHhcchHHH
Confidence 244444444444443332 22 233345566777778888888888888887778888885 67789999999
Q ss_pred HHHHHhhcCCccccHHHHHHHHH
Q psy11734 756 LTVGFLTQNKTLLEWRVVFWIMF 778 (817)
Q Consensus 756 ~~~g~~~~~~g~~~~~~~~~~~~ 778 (817)
.+.|.+.|..| .+.+|++..
T Consensus 282 ~l~G~lad~~g---~~~a~~v~~ 301 (310)
T TIGR01272 282 LLQGSLADCLG---IQLAFALPV 301 (310)
T ss_pred HHHHHHHHhcc---chHHHHHHH
Confidence 99999999876 556665433
No 198
>KOG0569|consensus
Probab=99.52 E-value=4.7e-14 Score=155.22 Aligned_cols=289 Identities=15% Similarity=0.131 Sum_probs=191.2
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhh-hhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSG-LIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~-~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
|++.|+..|.......-++.|..|++.||........+..+|..++..++. .+......|++.+....+++++..+...
T Consensus 123 R~i~Gl~~gl~~~~~pmyl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~ 202 (485)
T KOG0569|consen 123 RLIVGLACGLSTGLVPMYLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP 202 (485)
T ss_pred HHHHHHHhHHHHHHHHHHHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999987764 3333267899999999888877766665
Q ss_pred heeccCCCCCCCCCH-H-HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHH
Q psy11734 81 ILCFNDPKSHPYISE-K-ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGF 158 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (817)
++ ||++|+.-. + +.++.+++++.....++++-+.+
T Consensus 203 ~~----PESPk~Ll~~k~~~~~A~~sl~~y~G~~~~~~~~e--------------------------------------- 239 (485)
T KOG0569|consen 203 FL----PESPKYLLIKKGDEEEARKALKFYRGKEDVEAEIE--------------------------------------- 239 (485)
T ss_pred cC----CCCcchHHHHcCCHHHHHHHHHHHhCCCcchhHHH---------------------------------------
Confidence 54 556654322 1 11111111111100000000000
Q ss_pred HHHHHHHhhhhcccCcCCchhhhHHhhhccC--cccCchHHHHhhchhH-----HHHHHHHHHHHHHHHHHhhchhhHHH
Q psy11734 159 LSTALLTLLTPLVAHSGPVSMTVLRFLEGVG--EDLKTPWAAILYSLPV-----WSLIISEVGHDYGLYLISTDLPKYMS 231 (817)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~~~~~-----~~~~i~~~~~~~~~~~~~~~~p~~l~ 231 (817)
-..+..++.+ +++..+++++++||+. ..+.+...-...+.+....|...+++
T Consensus 240 ---------------------~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~ 298 (485)
T KOG0569|consen 240 ---------------------EMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFK 298 (485)
T ss_pred ---------------------HHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHH
Confidence 0001111111 1245568899988764 44445555566677778888888888
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---CCCh---hH
Q psy11734 232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---GCNT---SM 305 (817)
Q Consensus 232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~ 305 (817)
+ .|++..++-+.....++.+.+.++.+.++.||.|||+. ...+..++.+..+.+... .+.. ..
T Consensus 299 ~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpL----------ll~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 367 (485)
T KOG0569|consen 299 T-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPL----------LLISLSLMAVALLLMSIALFLSNSFGSWLS 367 (485)
T ss_pred H-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHH----------HHHHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 7 49999999999999999999999999999999999986 556655555544444322 1111 11
Q ss_pred --HHHHHHHHHHHhhhc-cccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 306 --VAIFFTIGMAFMGFC-YASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 306 --~~~~~~l~~~~~g~~-~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.+..+.+..+....+ .|..+-...|+.| +.|+++.++...+..+...+-...+..+.+..
T Consensus 368 y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~ 431 (485)
T KOG0569|consen 368 YLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVI 431 (485)
T ss_pred HHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 122333333333333 3444777788776 79999999999998877776666655555544
No 199
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.51 E-value=5.2e-12 Score=136.38 Aligned_cols=187 Identities=19% Similarity=0.205 Sum_probs=155.2
Q ss_pred HHHHhhchh-HHHHHHHHHHHHHHHHHHhhchhhHHHHhhC----CcccccchhhhhhHHHHHHHHhhhHHHHHH-Hhhc
Q psy11734 196 WAAILYSLP-VWSLIISEVGHDYGLYLISTDLPKYMSEVIG----LSVAENGVLSALPFLIMWLVSMSSSALADF-FIAR 269 (817)
Q Consensus 196 ~~~l~~~~~-~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r 269 (817)
.+..+++|+ ++.++..-+.-.+++|++...+-.|+....+ +|.+++.-+...+.--.=....++|+++|| +|+|
T Consensus 13 ~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 13 EMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred ccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 456677664 7889999999999999999999999987777 999998888888777777889999999999 5888
Q ss_pred CcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhhccccccccccccCCC---chhHHHHHHHh
Q psy11734 270 DILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNG 345 (817)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~---~~g~a~g~~~~ 345 (817)
+. +.+|.+++.++-+.+.... .......+.+.+...+.|..-++......|..|+ +|-.++++.+.
T Consensus 93 ~t----------I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~ 162 (498)
T COG3104 93 RT----------IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYM 162 (498)
T ss_pred HH----------HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEE
Confidence 86 8899999999988888774 3444555555555678888888888888786653 37788899999
Q ss_pred hhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHH
Q psy11734 346 LGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVI 425 (817)
Q Consensus 346 ~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~ 425 (817)
..++|+.++|.+.+.+.++. +|+..|-..++-+..
T Consensus 163 ~iNiGsl~~p~i~~~~~~~~---------------------------------------------g~~~gF~~aavGm~~ 197 (498)
T COG3104 163 GINIGSLIAPIITGLLAINY---------------------------------------------GWHVGFGLAAVGMII 197 (498)
T ss_pred EeehHHHHHHHHHHHHHHhh---------------------------------------------CHHHHHHHHHHHHHH
Confidence 99999999999999988875 699999999999999
Q ss_pred hhhhheeecccc
Q psy11734 426 SNVFFVLFGSGE 437 (817)
Q Consensus 426 ~~~~~~~~~~~~ 437 (817)
+++.+.+.+|.-
T Consensus 198 gl~~f~~~~r~~ 209 (498)
T COG3104 198 GLVIFLLGRRHV 209 (498)
T ss_pred HHHHHHHccchh
Confidence 999988877553
No 200
>KOG0253|consensus
Probab=99.50 E-value=4.8e-13 Score=136.80 Aligned_cols=280 Identities=13% Similarity=0.164 Sum_probs=181.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+|.+.|+|.|+ .|...++-.+..|..+|.+.+-.. ..+.+|.++...+.-..++ .+||||-....+.+..+.. ..+
T Consensus 172 f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~-~~gwr~~l~~~~~pl~~~a-~f~ 247 (528)
T KOG0253|consen 172 FRALWGFGVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMS-NFGWRYLLFTSSTPLMFAA-RFL 247 (528)
T ss_pred HHHHHhccCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHH-hhhHHHHHHHHHhHHHHHH-HHH
Confidence 47889999998 999999999999999999988887 9999999999999998998 8999999888874444433 334
Q ss_pred heeccCCCCCC-CCCHHHHhHhhhhcccccc---------------ccccccccCccccchhhhhhhhchhhcccccccc
Q psy11734 81 ILCFNDPKSHP-YISEKERKYLLDSIGAAER---------------RKDAKFDWDERTQGVILSSFYYGYTLTHIPGGIL 144 (817)
Q Consensus 81 ~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (817)
+.+||.|+-.- .-++.+..+..+++.++.. .++++-|.+++.+
T Consensus 248 ~w~~ESpRf~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~--------------------- 306 (528)
T KOG0253|consen 248 VWVYESPRFYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKS--------------------- 306 (528)
T ss_pred hhcccCcchhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhh---------------------
Confidence 44444443110 1112222222222211100 0011111111000
Q ss_pred ccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhh---chhHHHHHHHHHHHHHHHHH
Q psy11734 145 SQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILY---SLPVWSLIISEVGHDYGLYL 221 (817)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~i~~~~~~~~~~~ 221 (817)
+ ..+.......+++. .+..+......+.+...+|+
T Consensus 307 ------~------------------------------------a~ke~rg~~~nLlsp~lrkttlllw~iwfgnafsyyg 344 (528)
T KOG0253|consen 307 ------S------------------------------------AAKEVRGGTTNLLSPKLRKTTLLLWRIWFGNAFSYYG 344 (528)
T ss_pred ------c------------------------------------cccccccchHhhcChHHHHHHHHHHHHHHhhHHHHHH
Confidence 0 00111112233332 11234444555566667777
Q ss_pred HhhchhhHHHHhh-------------------CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHH
Q psy11734 222 ISTDLPKYMSEVI-------------------GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFA 282 (817)
Q Consensus 222 ~~~~~p~~l~~~~-------------------g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~ 282 (817)
........+|... ..+..+--.-.....++.+.|.++.+++.||+|||+. +
T Consensus 345 ~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkT----------M 414 (528)
T KOG0253|consen 345 SVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKT----------M 414 (528)
T ss_pred HHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhH----------H
Confidence 7665555555321 1111111222445678889999999999999999997 7
Q ss_pred HHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhccccccccc
Q psy11734 283 TLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTV 358 (817)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~ 358 (817)
....++..++.+.+.... +.....+.++.+-++....++..+++..|++| +.|+++.|....+.++|+++.|.++
T Consensus 415 al~l~~f~iflfll~~c~-~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 415 ALSLILFGIFLFLLTTCK-TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred HHHHHHHHHHHHHHHHhc-CcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH
Confidence 888888887777776654 33445555566667777888889999999999 6899999999999999999999998
No 201
>KOG0254|consensus
Probab=99.50 E-value=5.5e-13 Score=153.51 Aligned_cols=249 Identities=17% Similarity=0.179 Sum_probs=174.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------
Q psy11734 521 RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------- 591 (817)
Q Consensus 521 ~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------- 591 (817)
.+.+++.+.+.++..+++++.|+++|++|||+.+.++.+.+.++++++++++ |+++++++|+++|+|.|
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~--~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAP--SWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHhccchhhhhhcchhh
Confidence 6779999999999999999999999999999999999999999999999999 99999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHcCChHHHH
Confidence
Q ss_pred -------c--Cc------------------------hhHHhhc----CHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Q psy11734 592 -------L--ET------------------------PWAAILS----SLPVWSLIISEVGHDYGFYLISSDLPKYMSQVI 634 (817)
Q Consensus 592 -------~--~~------------------------~~~~~l~----~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 634 (817)
. .. .++++++ ++..+...+..+....+......|.+.+++..
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~- 325 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA- 325 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence 0 00 0111111 11233444455555556666777888888774
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhc----C-------ch
Q psy11734 635 GLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVG----C-------NT 703 (817)
Q Consensus 635 g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~----~-------~~ 703 (817)
|.+... .......++...++..++.++.||+|||+.+ +.+...+.++++++.... . ..
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~ll----------l~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLL----------LFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHH----------HHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 655433 4455567788888888889999999987654 466666666666555321 1 01
Q ss_pred HHHHHHHHHH-HHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHH
Q psy11734 704 SMVAICFTIG-MAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTL 781 (817)
Q Consensus 704 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~ 781 (817)
+..+....+. ..+.....+..+...+|.+| +.|+++.++........+.+-....-...+..+ ....|...+..+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~---~~~~f~~f~~~~ 471 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALG---IGGTFGYFGGIC 471 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc---ccchHHHHHHHH
Confidence 2333333222 22223445666678899999 889999999999998877776655555544432 234445555555
Q ss_pred HHHHH
Q psy11734 782 FISNV 786 (817)
Q Consensus 782 ~i~~~ 786 (817)
.+...
T Consensus 472 ~~~~~ 476 (513)
T KOG0254|consen 472 LLSLI 476 (513)
T ss_pred HHHHH
Confidence 55444
No 202
>KOG4686|consensus
Probab=99.48 E-value=5.8e-13 Score=131.24 Aligned_cols=268 Identities=14% Similarity=0.117 Sum_probs=180.4
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc------chh---HHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW------ANV---FYIFGAI 71 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW------r~~---f~i~~~~ 71 (817)
.|++-|+|+-..-..-.+++..||..||.+.++|+..+..-+|+..-..+.+++.+ +.+= |.. ....+..
T Consensus 142 GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~ly~-~~~~~~~~~ghT~LG~~l~~~~~ 220 (459)
T KOG4686|consen 142 GRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFLYD-TMGRMFPGVGHTLLGLWLCFEVK 220 (459)
T ss_pred hheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHHHH-HHHHhcccchHHHHHHHHHHHHH
Confidence 38999999998888899999999999999999999999999999998888888887 3220 111 1111111
Q ss_pred HHHHHhhhhheeccCCCCCCCCCHH-HHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCC
Q psy11734 72 AVLWFAFWCILCFNDPKSHPYISEK-ERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGG 150 (817)
Q Consensus 72 ~~i~~~~~~~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (817)
+.....+.... ..+.++. |+....++-.. . ++
T Consensus 221 tc~~slical~-------lg~~D~rAerilh~e~g~~-G--e~------------------------------------- 253 (459)
T KOG4686|consen 221 TCKQSLICALS-------LGLSDDRAERILHLEEGFL-G--EE------------------------------------- 253 (459)
T ss_pred HHHHHHHHHHH-------hhhhhhHHHHHHhhhcCcc-c--CC-------------------------------------
Confidence 11111111110 1111111 11100000000 0 00
Q ss_pred ccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 151 KHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
++.....- -.|.+|...+..++.+...+.+....|.++
T Consensus 254 -----------------------------------------pkLtdv~~-f~ppfw~~~iicv~yyva~fPFi~lg~~fF 291 (459)
T KOG4686|consen 254 -----------------------------------------PKLTDVNT-FYPPFWVLVIICVLYYVAWFPFITLGPMFF 291 (459)
T ss_pred -----------------------------------------cccccccc-cCccHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 01111111 257899999999999999999999999999
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHH
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFF 310 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (817)
++.+|+|+..++-+.+.......+.+++.|.++||.|++..+ +..+.+...++=..+.++.-+++..+.++
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~w---------v~~a~~~tl~~H~~l~Ft~lsPy~~m~~l 362 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWW---------VASACILTLLGHSGLFFTFLSPYTSMTFL 362 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehh---------HHHHHHHHHHHhhhHHhhhccHHHHHHHH
Confidence 999999999999999999889999999999999999999763 55555555555555555443444443333
Q ss_pred HHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccC
Q psy11734 311 TIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN 369 (817)
Q Consensus 311 ~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~ 369 (817)
. ........+.++....-++.++.|+++|..+..+++|-++.|.++|.+.|..|+|+
T Consensus 363 G--LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~ 419 (459)
T KOG4686|consen 363 G--LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYD 419 (459)
T ss_pred h--hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchh
Confidence 2 22222222333444444555799999999999999999999999999999987543
No 203
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.46 E-value=6.2e-16 Score=175.60 Aligned_cols=286 Identities=16% Similarity=0.249 Sum_probs=176.6
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccccc---CcchhHHHHhhhHHHHHh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTA---SWANVFYIFGAIAVLWFA 77 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~---gWr~~f~i~~~~~~i~~~ 77 (817)
.|+++|++.|...+.+..++.|..|+++|++..++.+....+|..++..++..+.+ .. +||+.+++..+++++..+
T Consensus 108 ~R~~~G~~~g~~~~~~~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~-~~~~~~Wr~~~~~~~~~~l~~~~ 186 (451)
T PF00083_consen 108 GRFLIGFGIGGAYVVSPIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSY-YSDNWGWRILLIFGAIPSLLVLL 186 (451)
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 59999999999999999999999999999999999999999999999988876654 44 499999999888776655
Q ss_pred hhhheeccCCCCCCCCCHHHHhHhhhhcccc-ccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 78 FWCILCFNDPKSHPYISEKERKYLLDSIGAA-ERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 78 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
.. .++ ||++++.-.+++++..++..+. ...+..+.+.++...
T Consensus 187 ~~-~~~---pESP~wL~~~~~~~~A~~~l~~~~~~~~~~~~~~~~~~--------------------------------- 229 (451)
T PF00083_consen 187 LR-FFL---PESPRWLLSKGRDEEAEKVLRKLRGKEIEDEEIEEIKA--------------------------------- 229 (451)
T ss_pred cc-ccc---ccccceeccccccccccccccccccccccccccccccc---------------------------------
Confidence 44 445 4455554333332211111110 000111111111000
Q ss_pred HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh----HHHHHHHH-HHHHHHHHHHhhchhhHHH
Q psy11734 157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP----VWSLIISE-VGHDYGLYLISTDLPKYMS 231 (817)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~i~~-~~~~~~~~~~~~~~p~~l~ 231 (817)
..+. +++.+..+++++++++ ........ +....+.+....+.|.+++
T Consensus 230 ---------------------------~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~ 281 (451)
T PF00083_consen 230 ---------------------------EKKE-SQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE 281 (451)
T ss_pred ---------------------------cccc-ccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 0000 0001134666777643 22222222 2223344455666777766
Q ss_pred HhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhh---c-cCCC----h
Q psy11734 232 EVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCN----T 303 (817)
Q Consensus 232 ~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~----~ 303 (817)
+ .|.+.. -.......+...++.+++..+.||+|||+. ...+..++.++...+. . ..++ .
T Consensus 282 ~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~----------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (451)
T PF00083_consen 282 N-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKL----------LIIGLLLMAICSLILGIIFFLGVSSSSWWS 348 (451)
T ss_pred c-cccccc--cccccccccccccccccccccccccccccc----------cccccccccccccccccccccccccccccc
Confidence 5 466666 333444556677788888899999999986 5566666555554442 1 1111 1
Q ss_pred hHHHHHHHHHHHHhh-hccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 304 SMVAIFFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 304 ~~~~~~~~l~~~~~g-~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
........+...... ...+....+..|..| +.|+++.|+.+.++++++.+++.+...+.++.
T Consensus 349 ~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~ 412 (451)
T PF00083_consen 349 ILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNL 412 (451)
T ss_pred cccceeeeeccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 222222222222222 233444677788888 79999999999999999999999888777664
No 204
>KOG2615|consensus
Probab=99.45 E-value=8.7e-13 Score=136.16 Aligned_cols=239 Identities=17% Similarity=0.125 Sum_probs=171.1
Q ss_pred ccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc----
Q psy11734 516 FDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED---- 591 (817)
Q Consensus 516 ~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~---- 591 (817)
.+.+..-.|.+.|+|.+...++++.+|.++||||||.++.++++..++..++-+++. |+..+++.|++.|+..+
T Consensus 63 ~~~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~--~F~afv~aR~l~Gi~kgnl~v 140 (451)
T KOG2615|consen 63 DGASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSR--NFAAFVLARFLGGIFKGNLSV 140 (451)
T ss_pred ccccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHhhhhccCchHH
Confidence 334566689999999999999999999999999999999999999999999999999 99667777999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~r 220 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLR 220 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccch
Confidence
Q ss_pred cCc----hh-------------H-----HhhcCHh-------HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHH
Q psy11734 592 LET----PW-------------A-----AILSSLP-------VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENG 642 (817)
Q Consensus 592 ~~~----~~-------------~-----~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~ 642 (817)
+++ +. . ..+||++ .....+.++.++..+-+.....+.+-.+.+|+++.+.|
T Consensus 221 k~~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G 300 (451)
T KOG2615|consen 221 KRNDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQG 300 (451)
T ss_pred hhcccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhhe
Confidence 000 00 0 1233332 23334455555555555555555555667899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhh
Q psy11734 643 VLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYA 722 (817)
Q Consensus 643 ~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 722 (817)
.+.+..++.+.+.+....+..||.+.. -+.....+..++...++++.... .+........+-.+......+
T Consensus 301 ~vl~~tGl~m~~~ql~~~~~l~~~~~~--------~~a~l~~~l~~~vP~~llls~~~-~~~~l~~~s~l~sf~~A~~vt 371 (451)
T KOG2615|consen 301 KVLSTTGLLMLVIQLALVPILPRYKGN--------IKAVLLFSLLLIVPAFLLLSLAR-TPVVLYLGSTLKSFSTASVVT 371 (451)
T ss_pred eeeehhhHHHHHHHHhccccccccccc--------hhhHHHHHHHHHHHHHHHHhccc-cchhhhHHHHHHHHHHHHhhH
Confidence 999988888888888877777776621 01122344444444444444443 333444444444444445555
Q ss_pred hhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734 723 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 723 ~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
..........| ++||++.|+....+.++-++||.+.|.+....
T Consensus 372 ~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 372 CLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 56666677777 78999999999999999999999999877653
No 205
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.43 E-value=2.5e-12 Score=146.18 Aligned_cols=313 Identities=10% Similarity=-0.006 Sum_probs=174.4
Q ss_pred cccccCCcccccchhhhhhhhccCCCC---cchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNE---RSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF 78 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~---rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~ 78 (817)
|.++|+|.|...|...++++|++|++| |+++.+++..+.++|..+||++++++.+ ..|||+.|++.++..++. ++
T Consensus 109 ~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~-~~g~~~~f~~~~~~~~~~-~l 186 (475)
T TIGR00924 109 LGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAE-NYGYHVGFNLAAVGMVIG-LL 186 (475)
T ss_pred HHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHH-hcChHHHHHHHHHHHHHH-HH
Confidence 678899999999999999999999865 8999999999999999999999999999 889999999987544333 33
Q ss_pred hhheec----cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccch
Q psy11734 79 WCILCF----NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTL 154 (817)
Q Consensus 79 ~~~~~~----~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (817)
.+++.+ +.|++++..++++++........ .......+. .++..++-.... .
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~---------~~~~~~~~~~~~-~ 241 (475)
T TIGR00924 187 TFFAGRHMLRDIGSVPDPLSGQGKTYGKLLLAL---------------LAALALVFF---------CAWLMHHVVIAN-I 241 (475)
T ss_pred HHHHcccccccCCCCCCCcchhhhhhHHHHHHH---------------HHHHHHHHH---------HHHHHhccHHHH-H
Confidence 333322 22211111111111000000000 000000000 000000000000 0
Q ss_pred hHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734 155 GLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI 234 (817)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~ 234 (817)
.......+ .. ... .....+++....+-.|...+...++...+....+.-..+.+|.+.++..
T Consensus 242 ~~~~~~~~--~~-~~~---------------~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~ 303 (475)
T TIGR00924 242 LLMTVTLA--VI-IFF---------------FRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLNFFADNNM 303 (475)
T ss_pred HHHHHHHH--HH-HHH---------------HHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhc
Confidence 00000000 00 000 0000011111111122333444455555545555555566777776643
Q ss_pred CCcccc----cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc--------cCCC
Q psy11734 235 GLSVAE----NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY--------VGCN 302 (817)
Q Consensus 235 g~s~~~----ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~ 302 (817)
+.+... .+++.....+..++..++..++-.|..||... .....-...|+++.++++..+.. ...+
T Consensus 304 ~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~---~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~s 380 (475)
T TIGR00924 304 HHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKD---PTTPLKFTLGMLFCGASFLTFAASIWFADAGGLTS 380 (475)
T ss_pred cccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCC---CCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCCccC
Confidence 433222 56777777777777777766655566554210 00111135666666666555542 1235
Q ss_pred hhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceec
Q psy11734 303 TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 303 ~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
.++..+...+...+-....+.......+..| +.||+.+|+......+|..+++.+.....
T Consensus 381 ~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~~~~ 441 (475)
T TIGR00924 381 PWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLATFGA 441 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6666666667777777778888888878776 68999999999999988888888766443
No 206
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.41 E-value=2.9e-16 Score=178.36 Aligned_cols=261 Identities=19% Similarity=0.276 Sum_probs=177.8
Q ss_pred ChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc-chHHHHHHHHHHhhhcc------
Q psy11734 519 DERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS-GPVSMTVLRFLEGVGED------ 591 (817)
Q Consensus 519 s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~-s~~~l~~~R~l~Gig~~------ 591 (817)
++.+.+++.+...+|..+|+++.|.++||+|||+.+.++.++..+++++.++++.+ +++.+.++|+++|++.|
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 67789999999999999999999999999999999999999999999999999733 68899999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 124 ~~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pESP~wL~~~~~ 203 (451)
T PF00083_consen 124 PIYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPESPRWLLSKGR 203 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeccccc
Confidence
Q ss_pred ---------------------------c------CchhHHhhcCHh----HHHHHHHHHHHHH-HHHHHHhhHHHHHHHH
Q psy11734 592 ---------------------------L------ETPWAAILSSLP----VWSLIISEVGHDY-GFYLISSDLPKYMSQV 633 (817)
Q Consensus 592 ---------------------------~------~~~~~~~l~~~~----~~~~~~~~~~~~~-~~~~~~~~~p~~l~~~ 633 (817)
. +..++++++++. .........+... +.+....+.|..+++
T Consensus 204 ~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~~- 282 (451)
T PF00083_consen 204 DEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFEN- 282 (451)
T ss_pred ccccccccccccccccccccccccccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-
Confidence 0 001233444422 2222222222222 233444555555544
Q ss_pred hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHH---h-hcCc----hHH
Q psy11734 634 IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAAS---Y-VGCN----TSM 705 (817)
Q Consensus 634 ~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~---~-~~~~----~~~ 705 (817)
.+.+.. -.......+...++.+++.++.||+|||+.+ ..+....+++.+.+. . ...+ ...
T Consensus 283 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~----------i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (451)
T PF00083_consen 283 AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLL----------IIGLLLMAICSLILGIIFFLGVSSSSWWSIL 350 (451)
T ss_pred cccccc--ccccccccccccccccccccccccccccccc----------ccccccccccccccccccccccccccccccc
Confidence 566665 2223344567777888888999999999765 355555555555443 1 1112 122
Q ss_pred HHHHHHHHHHHHh-hhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHH
Q psy11734 706 VAICFTIGMAFMG-FCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI 783 (817)
Q Consensus 706 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i 783 (817)
.+....+.....+ ...+..+....|.+| +.|+++.|+....+.+++.++|.+...+.++.+ ....+.+.++++++
T Consensus 351 ~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~---~~~~~~i~~~~~~i 427 (451)
T PF00083_consen 351 SIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLG---GWGVFLIFAGVCLI 427 (451)
T ss_pred cceeeeecccccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccchhhHHHHHH
Confidence 2222222222222 344555688899999 789999999999999999999999988887764 23556666666666
Q ss_pred HHHHHHHhccCc
Q psy11734 784 SNVFFVLFGSGE 795 (817)
Q Consensus 784 ~~~~~~~~~~~~ 795 (817)
+.+..+++.++.
T Consensus 428 ~~i~~~~~lpET 439 (451)
T PF00083_consen 428 AIIFVYFFLPET 439 (451)
T ss_pred HHhheeEEEeeC
Confidence 666665554433
No 207
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.38 E-value=1.6e-11 Score=137.61 Aligned_cols=178 Identities=16% Similarity=0.236 Sum_probs=136.3
Q ss_pred cCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccccccchhhH
Q psy11734 601 SSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYL-IVRDILSRTNVRK 679 (817)
Q Consensus 601 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~r~ 679 (817)
+.|.++.++...+.....+|++..++|.|+++.+|++..+++...........++.+++|+++||+ |||+.+
T Consensus 7 ~p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~i------- 79 (493)
T PRK15462 7 QPRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAV------- 79 (493)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHH-------
Confidence 345677778888888999999999999999999999999999999999999999999999999999 988653
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-C--chHHHHHHHHHHHHHHHhHHHH
Q psy11734 680 VFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-N--FSGTIMALSNGLGCVSGMVAPL 756 (817)
Q Consensus 680 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~g~~~g~~~~~~~~g~~i~p~ 756 (817)
..+.++..++.+++.....+.........+...+.+...+...+...|.+| + .|.++.++.+...++|+.++|.
T Consensus 80 ---liG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~ 156 (493)
T PRK15462 80 ---MLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPI 156 (493)
T ss_pred ---HHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHH
Confidence 466666666655554322122222222223333444444555677788887 3 5999999999999999999999
Q ss_pred HHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 757 TVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 757 ~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
+.+++.+..| |+..|.+.++..+++.+.+...
T Consensus 157 l~g~L~~~~G---w~~~F~iaaigm~l~li~~~~~ 188 (493)
T PRK15462 157 ACGYAQEEYS---WAMGFGLAAVGMIAGLVIFLCG 188 (493)
T ss_pred HHHHHHhhhC---hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999988865 9999998877776666665543
No 208
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.36 E-value=6.5e-12 Score=141.48 Aligned_cols=255 Identities=17% Similarity=0.224 Sum_probs=194.6
Q ss_pred CcccccchhhhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcc----cc--cCcchhHHHHhhhHHHHHhhhh
Q psy11734 8 PKGTTFPALCTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMS----FT--ASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 8 g~g~~~~~~~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~----~~--~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+.......-.++..|..+ +|||.+..+.-.....+|..+...+.+.+.+ .. .+|++..++.+++.++..++.+
T Consensus 116 ~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~ 195 (428)
T PF13347_consen 116 AYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITF 195 (428)
T ss_pred hhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhh
Confidence 334445566778889998 4799999999999999998777777766664 11 1799999999999998888888
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+..||++++.+ +++ ++
T Consensus 196 ~~~ke~~~~~~---~~~----------------~~--------------------------------------------- 211 (428)
T PF13347_consen 196 FFVKERSVEVT---EQE----------------KK--------------------------------------------- 211 (428)
T ss_pred heeeecccccc---ccc----------------cc---------------------------------------------
Confidence 88777211110 000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
...++.+++++|||++.......++............+.|.++..|.+ ..
T Consensus 212 -----------------------------~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~ 261 (428)
T PF13347_consen 212 -----------------------------ISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GL 261 (428)
T ss_pred -----------------------------cccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hh
Confidence 001334778999999999999999988888888888888888887777 55
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC-CChhHHHHHHHHHHHHhhh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAIFFTIGMAFMGF 319 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~g~ 319 (817)
.+.......++..++.++.++++||+|+|+. ...+..+..++.+.+.+.+ ++.+...+...+.+.+.+.
T Consensus 262 ~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~ 331 (428)
T PF13347_consen 262 ISIFMLIFFVASIVGSPLWGRLSKRFGKKKV----------YIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGA 331 (428)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHccceee----------hhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcc
Confidence 6666777889999999999999999999997 7777777777777666655 4666667777777777777
Q ss_pred ccccccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 320 CYASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 320 ~~~~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
......+...|+.+ +..|..+|+.++...++.++++.+.+.+.+..|
T Consensus 332 ~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 332 FFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVG 386 (428)
T ss_pred cccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhC
Confidence 77777777776554 346999999999999999999999999987765
No 209
>KOG2563|consensus
Probab=99.35 E-value=2.1e-11 Score=129.36 Aligned_cols=305 Identities=13% Similarity=0.013 Sum_probs=220.2
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhH
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQ 523 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 523 (817)
+..++||.++.++++..+.+.+....+++...+... -++ +.+..
T Consensus 38 rVy~rRW~vLl~~slL~~SN~~qWI~ya~i~n~~~~-----------------------------------~Yg-s~~~~ 81 (480)
T KOG2563|consen 38 RVYPRRWVVLLAFSLLNFSNGMQWIQYAPINNYVNS-----------------------------------FYG-SSSAA 81 (480)
T ss_pred ccchhHhHHHHHHHHHHhcCcchheeehhHHHHHHH-----------------------------------Hhc-chHHH
Confidence 457889999999999999999999988877655555 667 77778
Q ss_pred HHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhh----cchH--HHHHHHHHHhhhcc------
Q psy11734 524 GVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAH----SGPV--SMTVLRFLEGVGED------ 591 (817)
Q Consensus 524 g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~----~s~~--~l~~~R~l~Gig~~------ 591 (817)
-|...+|++.+....+++-++.||+|-|....++..+..++..+-..+.. .+++ ....+..+.+.+.-
T Consensus 82 ~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lP 161 (480)
T KOG2563|consen 82 DWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLP 161 (480)
T ss_pred HHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccc
Confidence 89999999999999999999999999999999999999999999888751 2344 45566666665555
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 162 skiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t 241 (480)
T KOG2563|consen 162 SKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT 241 (480)
T ss_pred cHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence
Q ss_pred ---------c----CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q psy11734 592 ---------L----ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMS 658 (817)
Q Consensus 592 ---------~----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 658 (817)
. ..+.++.++++++....+.+......+++..+.+-.-+.. .|++...+|+......+++++|..+
T Consensus 242 Pps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~l~iv~Gmlga~~ 320 (480)
T KOG2563|consen 242 PPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGALMIVAGMLGALA 320 (480)
T ss_pred CCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHHHHHHHHHHHHHH
Confidence 0 1124578899999999999998888888888777765655 4788888999999999999999999
Q ss_pred HHHHHhhhhcccccccchhhHHHHHHHHHHHHHH-HHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhc-cccCCC
Q psy11734 659 SSALADYLIVRDILSRTNVRKVFATLGAVLPGVG-ALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNP-IDLSPN 734 (817)
Q Consensus 659 ~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 734 (817)
.|.+.||.++.+.. +........++ +.+..... ...+.......+.+++.....|.-.-.. ...+|.
T Consensus 321 ~gii~Dktk~fk~~---------~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~TyPv 391 (480)
T KOG2563|consen 321 SGIIADKTKKFKLT---------TLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVETTYPV 391 (480)
T ss_pred HHhhhhhhhhHHHH---------HHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeeecccc
Confidence 99999999865432 12223333333 22222221 1223333333444444444555444333 446788
Q ss_pred chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCc-cccHHHHHHHHHHHHHHHHHHHHHhccC
Q psy11734 735 FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKT-LLEWRVVFWIMFLTLFISNVFFVLFGSG 794 (817)
Q Consensus 735 ~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g-~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 794 (817)
.=++..|+.+..+++-+.+-..+.+...+..+ ++++...-+.+...+.++..+..+.++.
T Consensus 392 ~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~ 452 (480)
T KOG2563|consen 392 AEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPD 452 (480)
T ss_pred CCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhh
Confidence 88899999999999999999999999888764 2223334444555555555555555443
No 210
>PTZ00207 hypothetical protein; Provisional
Probab=99.34 E-value=4.1e-12 Score=144.59 Aligned_cols=394 Identities=12% Similarity=0.055 Sum_probs=230.6
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCI 81 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~ 81 (817)
|+++|+|.+..++.+...+.+||| ++||+++|+.....++|+++.+++...+.. .+|++.|++.+++++++.++++.
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence 788999999999999999999996 789999999999999999875555554444 47999999999999999999999
Q ss_pred eeccCCCCCC-----CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 82 LCFNDPKSHP-----YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 82 ~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
+++++|.... +.+++++. .++.......+++.-.|. -.....+.+....|...+ ..+.+..+-.+..-.
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~~~~--~~~~~~~~y~~q~~p~~~-f~~~~~i~~~l~~yl~~~---~~~~~~~~~~~~~~~ 277 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEEEKA--QRLMRKGVYLKQKAPMWR-FVYGFVILIILIVFLPLQ---GALVAYLKLGSNFKV 277 (591)
T ss_pred heeCCcchhhcccccCCCHHHHH--HHhhhhhhhhhcCCCcee-hhhHHHHHHHHHHHHHHH---HHHHHHhcccHHHHH
Confidence 8887653221 11222221 111111011111100000 001111222222222222 222221111111111
Q ss_pred HHHHHHH-HH-----hhhhcccCcCC--c------h---hh------------hHHhhhccCcccCchHHHHhhchhHHH
Q psy11734 157 GFLSTAL-LT-----LLTPLVAHSGP--V------S---MT------------VLRFLEGVGEDLKTPWAAILYSLPVWS 207 (817)
Q Consensus 157 ~~~~~~~-~~-----~~~~~~~~~~~--~------~---~~------------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 207 (817)
.....++ +. +.++...-... . . .- .....+....+..+++++.+++..+|.
T Consensus 278 ~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wl 357 (591)
T PTZ00207 278 GFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWC 357 (591)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHH
Confidence 1111111 11 11111110000 0 0 00 000000000111125678888999999
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc--cchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHH
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE--NGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLG 285 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~--ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~ 285 (817)
.++..+|..+.-..+..-+-++.+..-|++..+ ...+....++++.+|++..|..+....+|+. .++-.|...+.+.
T Consensus 358 l~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~-~~r~prt~~l~~~ 436 (591)
T PTZ00207 358 LLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRA-EDRVPITIALFIP 436 (591)
T ss_pred HHHHHHHhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhcc-ccccchhHHHHHH
Confidence 999999999998888888888888743773333 3336788999999999999999944444431 0112345556666
Q ss_pred hHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhccccc-ccccceeccc
Q psy11734 286 AVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVA-PLTVGFLTQN 364 (817)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~-~~i~g~l~~~ 364 (817)
.+ +.++.+.++...+ .....+..++.+.+.|...+......+|++.|+-|+-+-+.....-+|+.+- -.++|.+.|+
T Consensus 437 ~~-~~~~~lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFgk~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ 514 (591)
T PTZ00207 437 SV-CIITMLTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFAKDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQ 514 (591)
T ss_pred HH-HHHHHHHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhccchHHHhhHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 66 4444444444332 2455566666777888888888999999888988888877777777777665 4467777776
Q ss_pred ccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 365 IISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
-..- .+. ..|.. .+=++..|.++++++..+.+..+.+.-+.++
T Consensus 515 ea~k---------~~~-------~~C~G----------------~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 515 QADK---------LGQ-------DVCTE----------------RVCVVMPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred HHhh---------CCC-------CeeCC----------------ceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence 4210 000 00110 1238999999999999999887666655443
No 211
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.34 E-value=3e-11 Score=135.75 Aligned_cols=285 Identities=16% Similarity=0.128 Sum_probs=206.9
Q ss_pred chhhhhhhhccCCCCc--------------------------chhHHHhHhhhhhhHHHHhhhhhhhcc-------cccC
Q psy11734 14 PALCTLLAQWSPPNER--------------------------SFMTALVFAGVQLGSVLATFCSGLIMS-------FTAS 60 (817)
Q Consensus 14 ~~~~~~i~~~~p~~~r--------------------------g~~~gi~~~~~~~G~~ig~~~~~~l~~-------~~~g 60 (817)
..-.+++-|..+++++ ++..+.-.+...+|..+...+.-.+.. ...+
T Consensus 145 vfyna~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~ 224 (477)
T PF11700_consen 145 VFYNAYLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWA 224 (477)
T ss_pred HHHHHHhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchh
Confidence 3345667777777777 899999888888998888887665543 0223
Q ss_pred cchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccc
Q psy11734 61 WANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIP 140 (817)
Q Consensus 61 Wr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (817)
=|..+.+.+..-++..+..++.+|++|+.++..+.+.. ......
T Consensus 225 ~r~~~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~--~~~g~~---------------------------------- 268 (477)
T PF11700_consen 225 IRVAFLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSY--LRFGFK---------------------------------- 268 (477)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhH--HHHHHH----------------------------------
Confidence 48888888888788888888888887653221111110 000000
Q ss_pred ccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHH
Q psy11734 141 GGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLY 220 (817)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~ 220 (817)
+....++++.|+|+.....++.++..-+..
T Consensus 269 --------------------------------------------------~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ 298 (477)
T PF11700_consen 269 --------------------------------------------------RLWRTFKEIRKLRQLFLFLIAYFLYSDGVN 298 (477)
T ss_pred --------------------------------------------------HHHHHHHHHHhChHHHHHHHHHHHHHHHHH
Confidence 013346778889999999999999999999
Q ss_pred HHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhc--CcccchhhHHHHHHHHhHHH-HHHHHhhh
Q psy11734 221 LISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIAR--DILSRTNVRKVFATLGAVLP-GVGALAAS 297 (817)
Q Consensus 221 ~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 297 (817)
++......|.++++|++..+...+.....+...+|+++.|++.||+|.| +. +....... .+.+..+.
T Consensus 299 ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~----------l~~~l~~~~~i~~~g~~ 368 (477)
T PF11700_consen 299 TIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRT----------LLISLILWIIIPLYGLF 368 (477)
T ss_pred HHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHH----------HHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998 43 22222222 22223222
Q ss_pred ------ccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCC
Q psy11734 298 ------YVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINP 370 (817)
Q Consensus 298 ------~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~ 370 (817)
....+.+..++.-.+.+..+|...+...+...++-| ++.+.-+|+.+..+...+.+||.+.|.+.|.+|
T Consensus 369 G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg---- 444 (477)
T PF11700_consen 369 GFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATG---- 444 (477)
T ss_pred HhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC----
Confidence 012244445555555666666666666666666555 789999999999999999999999999999875
Q ss_pred CCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 371 IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
+.|..+....++.+++.++......++.
T Consensus 445 ----------------------------------------~~r~g~~~l~~lf~~gl~ll~~v~~~~g 472 (477)
T PF11700_consen 445 ----------------------------------------SQRYGFLFLLVLFLIGLILLFFVDVEKG 472 (477)
T ss_pred ----------------------------------------CchhHHHHHHHHHHHHHHHHhhccchhh
Confidence 4778888888888888888766655443
No 212
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=1.1e-10 Score=122.51 Aligned_cols=343 Identities=16% Similarity=0.167 Sum_probs=230.1
Q ss_pred HhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734 222 ISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC 301 (817)
Q Consensus 222 ~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (817)
..--+-+.+++.++.+..+++++......+..++++..|++.+|+|.|+. +..|..++++++.++.-..+
T Consensus 31 l~diLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~g----------i~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 31 LNDILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAG----------IVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred cchhhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHH----------HHHHHHHHHHHHHHHhhhhh
Confidence 33334446677799999999999999999999999999999999999986 89999999998888753322
Q ss_pred --ChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCc
Q psy11734 302 --NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFS 378 (817)
Q Consensus 302 --~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~ 378 (817)
++......+.+.+.+.+.--+..+.++..+.| +..+.-+.+...+..+|++++|.+.+.+...-.
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~------------ 168 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGV------------ 168 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhh------------
Confidence 45555555566666666666667888888776 577888899999999999999999998887520
Q ss_pred cchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccccc-ccC--CC------Cchh
Q psy11734 379 GTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQY-WNE--SI------LPAR 449 (817)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~-~~~--~~------~~~~ 449 (817)
......+...... ......++..|.+.+...++..+.....+..+.++ .++ +. +..+
T Consensus 169 ------------~~~~~~~~~~~~~--~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~ 234 (422)
T COG0738 169 ------------ALTMSAAQILAIK--GADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQ 234 (422)
T ss_pred ------------hhccCHHHHHHHH--HHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHh
Confidence 0000000000000 01134588889988888877776665555222111 111 11 0111
Q ss_pred HHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHH
Q psy11734 450 YVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSA 529 (817)
Q Consensus 450 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~ 529 (817)
..-+....++.|+..-.+...+..++...+ +..|.++.+.....+.
T Consensus 235 ~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~----------------------------------~~~g~~~~~aa~~~s~ 280 (422)
T COG0738 235 NKHLRLGVLAIFLYVGAEVAIGSFLVSYLE----------------------------------ELLGLNEQQAAYYLSF 280 (422)
T ss_pred ChHHHHHHHHHHHHHhHHHHHHHHHHHHHH----------------------------------hcCCccHHHHHHHHHH
Confidence 112333344444444455555555555444 0378899999999999
Q ss_pred HHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHH
Q psy11734 530 FYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLI 609 (817)
Q Consensus 530 ~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~ 609 (817)
++.+..+|..+...+..|+...|.+.+..+...+-.+..++++ +... ++.+.
T Consensus 281 ~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~--g~v~--------------------------~~~l~ 332 (422)
T COG0738 281 FWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIG--GVVA--------------------------LYALF 332 (422)
T ss_pred HHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc--ChHH--------------------------HHHHH
Confidence 9999999999999999999999999988888877777777877 4221 11122
Q ss_pred HHHHHHHHHHHHHHhhHHHHHH---HHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 610 ISEVGHDYGFYLISSDLPKYMS---QVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 610 ~~~~~~~~~~~~~~~~~p~~l~---~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
+..++. ....|+.+. +.++...+..+.......+++.+..++.|+++|+.|.-
T Consensus 333 ~ig~F~-------simfPTIfslal~~l~~~ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 333 LIGLFN-------SIMFPTIFSLALKNLGEHTSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred HHHHHh-------HHHHHHHHHHHHhccCccccccceeeeeheecchHHHHHHHHHHHhhhhH
Confidence 222111 122344433 22343334455666677789999999999999999853
No 213
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.28 E-value=1.1e-10 Score=133.50 Aligned_cols=181 Identities=15% Similarity=0.206 Sum_probs=135.6
Q ss_pred HhhcCHh-HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccccc
Q psy11734 598 AILSSLP-VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILSRT 675 (817)
Q Consensus 598 ~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~~~ 675 (817)
+.+|+|+ ++.++...++...++|++..++|.|+++.+|+|..+++..............+++|+++|| +|||+.+
T Consensus 15 ~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~--- 91 (500)
T PRK09584 15 NAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVI--- 91 (500)
T ss_pred hhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHH---
Confidence 4567764 8888888899999999999999999999999999998887777666666666899999999 5988654
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCCC---chHHHHHHHHHHHHHHHh
Q psy11734 676 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNGLGCVSGM 752 (817)
Q Consensus 676 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~ 752 (817)
..+.++..++..+..+...+.........+.+.+.+...+...+...+.+|+ .+..+.++.+...++|+.
T Consensus 92 -------~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~ 164 (500)
T PRK09584 92 -------MLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSF 164 (500)
T ss_pred -------HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHH
Confidence 4666666666666655432333333334445555555556666777777763 245678888999999999
Q ss_pred HHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 753 VAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 753 i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
++|.+.|++.|+.| |+..|.+.++..+++.+.+...
T Consensus 165 ~gp~i~g~l~~~~g---~~~~F~i~~i~~~i~~i~~~~~ 200 (500)
T PRK09584 165 FSMLATPWLAAKYG---WSVAFALSVVGMLITVVNFAFC 200 (500)
T ss_pred HHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999865 9999998887666666555443
No 214
>KOG0254|consensus
Probab=99.28 E-value=1.7e-11 Score=141.25 Aligned_cols=280 Identities=13% Similarity=0.087 Sum_probs=175.9
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHHhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWFAFW 79 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~~~~ 79 (817)
.|+++|+|.|........+++|.-|++.||...+..+....+|..++..++....+ . .+||..+++..+.+++..+.
T Consensus 148 GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~-~~~~Wr~~~~~~~i~~~~~~~~- 225 (513)
T KOG0254|consen 148 GRILTGLGVGGASVLAPVYISEIAPAHIRGTLVSLYQLFITIGILLGYCINYGTSK-VYAGWRIPLGLALIPAVILALG- 225 (513)
T ss_pred HHHHhccchhhhhhcchhhHhhcCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhcc-CCccHHHHHHHHHHHHHHHHHH-
Confidence 49999999999999999999999999999999999999999999999555555443 2 48999999988888888777
Q ss_pred hheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHH
Q psy11734 80 CILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFL 159 (817)
Q Consensus 80 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (817)
.++.||.|+ +.-++++....++........+ +|+.....-.
T Consensus 226 ~~~~pesp~---~L~~~g~~~~a~~~l~~l~g~~---~~~~~~~~~~--------------------------------- 266 (513)
T KOG0254|consen 226 MLFLPESPR---WLIEKGRLEEAKRSLKRLRGLS---PEDVEVELEL--------------------------------- 266 (513)
T ss_pred HHhCCCChH---HHHHcCChHHHHHHHHHHhCCC---CcchHHHHHH---------------------------------
Confidence 676765543 3222211111111100000000 1111000000
Q ss_pred HHHHHHhhhhcccCcCCchhhhHHhhhccCcccCc-hHHHHh----hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhh
Q psy11734 160 STALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKT-PWAAIL----YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVI 234 (817)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~----~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~ 234 (817)
.........+..... .+.+++ +++.++...+..+.+..+.....+|.+.+++..
T Consensus 267 --------------------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~- 325 (513)
T KOG0254|consen 267 --------------------LKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA- 325 (513)
T ss_pred --------------------HHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence 000000011111111 233333 344456777777777788888899999998874
Q ss_pred CCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc----CC-------Ch
Q psy11734 235 GLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV----GC-------NT 303 (817)
Q Consensus 235 g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~-------~~ 303 (817)
|.+... .......++.+.++..++..+.||.|||+. +..+...+.+++..+... .. ..
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~l----------ll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKL----------LLFGAAGMSICLVILAVVGVFALYYPNSSKGAG 394 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHH----------HHHhHHHHHHHHHHHHHHHHHhccCCCcccchh
Confidence 666444 555666788888999999999999999986 666666666666555422 10 11
Q ss_pred hHHHHHHHHHH-HHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccc
Q psy11734 304 SMVAIFFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMV 353 (817)
Q Consensus 304 ~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~ 353 (817)
+..+....+.. .+.....+..+....|..| +.|+++.++...+..+.+.+
T Consensus 395 ~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~ 446 (513)
T KOG0254|consen 395 WLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFL 446 (513)
T ss_pred HHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHH
Confidence 22222222222 2333334445678889888 78999999999888865543
No 215
>PRK09848 glucuronide transporter; Provisional
Probab=99.27 E-value=1e-11 Score=140.87 Aligned_cols=162 Identities=11% Similarity=0.042 Sum_probs=121.2
Q ss_pred hHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccc
Q psy11734 195 PWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSR 274 (817)
Q Consensus 195 ~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~ 274 (817)
.+++++|||.++...+..++.....+....+.|.|+++.+|.+....++...+..++.+++.++.+++.||+++|+.
T Consensus 220 ~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~--- 296 (448)
T PRK09848 220 SLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNT--- 296 (448)
T ss_pred HHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHH---
Confidence 36789999999999998888888888888888999998888887766666666677888999999999999998875
Q ss_pred hhhHHHHHHHHhHHHHHHHHhhhccCC-ChhHHHHHHHHHHHHhhhccccccccccccCC--------CchhHHHHHHHh
Q psy11734 275 TNVRKVFATLGAVLPGVGALAASYVGC-NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP--------NFSGTIMALSNG 345 (817)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p--------~~~g~a~g~~~~ 345 (817)
...+..+..++...+.+.+. +.+.......+.+.+.+...+...+...|..| ++.|..+|+.++
T Consensus 297 -------~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~ 369 (448)
T PRK09848 297 -------FLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSF 369 (448)
T ss_pred -------HHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHH
Confidence 66676666666655554432 23333333344444455555555555555443 246999999999
Q ss_pred hhhhcccccccccceeccccc
Q psy11734 346 LGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 346 ~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.+.+|.++++.+.|.+.+..|
T Consensus 370 ~~klg~aig~~i~g~~l~~~G 390 (448)
T PRK09848 370 TRKCGQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999988764
No 216
>PRK09669 putative symporter YagG; Provisional
Probab=99.26 E-value=2e-11 Score=138.26 Aligned_cols=250 Identities=10% Similarity=0.027 Sum_probs=160.0
Q ss_pred cccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhhee
Q psy11734 11 TTFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILC 83 (817)
Q Consensus 11 ~~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~ 83 (817)
.....-.++.+|+. +++||.+..++-.....+|..+++.+...+.. ...||+..+.+.+++.++..++.++..
T Consensus 125 ~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~ 204 (444)
T PRK09669 125 AINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMT 204 (444)
T ss_pred hhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCe
Confidence 34444557888887 45889998888888888887777665544332 135899999998888877776666666
Q ss_pred ccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHH
Q psy11734 84 FNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTAL 163 (817)
Q Consensus 84 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (817)
||++++++ +++ .
T Consensus 205 ~e~~~~~~----~~~---------------~------------------------------------------------- 216 (444)
T PRK09669 205 KERYTPEV----DNS---------------S------------------------------------------------- 216 (444)
T ss_pred EEecCCCC----cCC---------------C-------------------------------------------------
Confidence 65422110 000 0
Q ss_pred HHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccch
Q psy11734 164 LTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGV 243 (817)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~ 243 (817)
..++..++++|||+++...+..++............+.|.+...+ +++..+.
T Consensus 217 ---------------------------~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~-~~~~~~~ 268 (444)
T PRK09669 217 ---------------------------SVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLL-RPDLATL 268 (444)
T ss_pred ---------------------------CHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecC-CHHHHHH
Confidence 012346788999999888777776655554444444444443332 2233344
Q ss_pred hhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc-CCChhHHHHHHHHHHHHhhhccc
Q psy11734 244 LSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV-GCNTSMVAIFFTIGMAFMGFCYA 322 (817)
Q Consensus 244 ~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~g~~~~ 322 (817)
......+..+++.+++++++||+|+|+. ...+..+..+....+... .++.....+...+.+.+.+...+
T Consensus 269 ~~~~~~i~~ii~~~~~~~l~~r~gk~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~ 338 (444)
T PRK09669 269 FLVTGMIAGLFGALLSERLLGKFDRVRA----------FKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTP 338 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHH
Confidence 4555667888899999999999999875 444444333322222222 33444444444555556666666
Q ss_pred cccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 323 SIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 323 ~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
...+...|..+ +..|..+|..++...+|.++|+.+.|.+.|..|
T Consensus 339 ~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~G 390 (444)
T PRK09669 339 LQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 66666665432 345788999999999999999999999998875
No 217
>KOG0252|consensus
Probab=99.26 E-value=5.8e-12 Score=133.23 Aligned_cols=318 Identities=14% Similarity=0.109 Sum_probs=209.0
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cc--------cCcchhHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FT--------ASWANVFY 66 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~--------~gWr~~f~ 66 (817)
.|++.|+|.|+-+|.+.++.+|...+++||...+...+..+.|...|.+++-.+.. .. .=||-.|-
T Consensus 150 ~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~g 229 (538)
T KOG0252|consen 150 FRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFG 229 (538)
T ss_pred HHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHH
Confidence 49999999999999999999999999999999999999999999999888876664 01 13999999
Q ss_pred HHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccccccccc
Q psy11734 67 IFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQ 146 (817)
Q Consensus 67 i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (817)
+..++++++...-+.. ||++++....++ +..+..++...+... +.++.+..
T Consensus 230 lg~vpa~~~ly~Rl~M----~Et~~Y~al~~~-~~~~a~~d~~k~~~~--~~~~~~~~---------------------- 280 (538)
T KOG0252|consen 230 LGAVPALLVLYFRLKM----PETARYTALVSK-KLKQAAGDMKKVLSV--DIEAESTA---------------------- 280 (538)
T ss_pred HHHHHHHHHHHhhhcC----CcchhHHHHhhc-CHhhhhhcccccccc--ccchhhcc----------------------
Confidence 8877776665444443 555544311110 000000000000000 00000000
Q ss_pred ccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcc-cCc---hHHHHhhc---hhHHHHHHHHHHHHHHH
Q psy11734 147 KFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGED-LKT---PWAAILYS---LPVWSLIISEVGHDYGL 219 (817)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~l~~~---~~~~~~~i~~~~~~~~~ 219 (817)
....+ +++ .+.+.+.. +.........|.....+
T Consensus 281 ----------------------------------------~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDiaf 320 (538)
T KOG0252|consen 281 ----------------------------------------ESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIAF 320 (538)
T ss_pred ----------------------------------------ccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 00000 011 12222322 34677788888899999
Q ss_pred HHHhhchhhHHHHhhCCcccccch--------hhhhhH-HHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHH
Q psy11734 220 YLISTDLPKYMSEVIGLSVAENGV--------LSALPF-LIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPG 290 (817)
Q Consensus 220 ~~~~~~~p~~l~~~~g~s~~~ag~--------~~~~~~-i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~ 290 (817)
|+...+...++++ .|+.+.+.-. ...... .+.+.|-.+...++|++||+.. ...+++++.
T Consensus 321 y~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~i----------q~~GF~~~~ 389 (538)
T KOG0252|consen 321 YGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYI----------QLMGFFIMT 389 (538)
T ss_pred hccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHH----------HHhhHHHHH
Confidence 9999989888886 4766554433 122222 2333467788889999999986 888899888
Q ss_pred HHHHhhhccCCC---hhHHHHHHHHHH-HHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 291 VGALAASYVGCN---TSMVAIFFTIGM-AFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 291 ~~~~~~~~~~~~---~~~~~~~~~l~~-~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
+..+.+....++ .....++..+.. +........+-++..|.+| +.|++..|+.-..+-.|+.++...+..+.++.
T Consensus 390 i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~ 469 (538)
T KOG0252|consen 390 IFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHN 469 (538)
T ss_pred HHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhcc
Confidence 888888766542 222222222222 2332333445777788888 79999999999999999999999988887753
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccccc
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEV 438 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~ 438 (817)
.+..-+.+++|++.++++.++.++++++++.+.
T Consensus 470 ----------------------------------------yp~~~g~~~v~~i~~~~~~~gi~~T~l~pEtk~ 502 (538)
T KOG0252|consen 470 ----------------------------------------YPPNIGVRNVFIILAGCMLLGILFTLLIPETKG 502 (538)
T ss_pred ----------------------------------------CCccccchHHHHHHHHHHHHhHheeEEeecccc
Confidence 011237899999999999999999999984433
No 218
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.22 E-value=1.7e-11 Score=138.95 Aligned_cols=275 Identities=11% Similarity=0.005 Sum_probs=169.7
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchh---HHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFM---TALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF 78 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~---~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~ 78 (817)
+++.+++.+...+.+-+++.|..+ |++... ++.......+|..+|+.++|.+.+ ..+||.+|++.+.+.++. .+
T Consensus 127 ~~l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~-~~~~~~~f~~~a~l~ll~-~~ 203 (468)
T TIGR00788 127 IFLAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLD-KTLTRILFLITAALLLLQ-LF 203 (468)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHH-hcCcchHHHHHHHHHHHH-HH
Confidence 345677777778888899999998 555543 333334455899999999999999 889999999998777776 33
Q ss_pred hhheeccCCC-CCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHH
Q psy11734 79 WCILCFNDPK-SHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLG 157 (817)
Q Consensus 79 ~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (817)
...++||++. ..+..++++.... ..... ...+
T Consensus 204 ~~~~~~E~~~~~~~~~~~~~~~~~-~~~~~-~~~~--------------------------------------------- 236 (468)
T TIGR00788 204 VSNLSKERRAFVRPRIGTYLEMNM-ALLTL-GVLA--------------------------------------------- 236 (468)
T ss_pred HHHhcccccccccccccccchhhh-hhhhh-hHHH---------------------------------------------
Confidence 4455565431 1111101000000 00000 0000
Q ss_pred HHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc
Q psy11734 158 FLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS 237 (817)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s 237 (817)
. .++......+.+++|.++...+..++.+....+.....-.+.++..|++
T Consensus 237 -----------------------------~-~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f~~~~~~lG~s 286 (468)
T TIGR00788 237 -----------------------------N-VKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVFCATTQCLPGG 286 (468)
T ss_pred -----------------------------H-HHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeEEEEcccCCCC
Confidence 0 0000112445678888876555444421111111111111334568999
Q ss_pred ccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------CCChhHHHH
Q psy11734 238 VAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---------GCNTSMVAI 308 (817)
Q Consensus 238 ~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 308 (817)
+.+.|....+.+++.+++..+.+++.+|++.|+. ...+.++..++.+..... .++......
T Consensus 287 ~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~----------l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~ 356 (468)
T TIGR00788 287 PSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLL----------FGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLG 356 (468)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHH----------HHHHHHHHHHHHhCceeeeeccccccCCCCeeeeee
Confidence 9999999999999999999999999988887775 666666665544332211 012223333
Q ss_pred HHHHHHHHhhhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 309 FFTIGMAFMGFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 309 ~~~l~~~~~g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
...+...+.+.........+.+ .+++++|+.+++.+.++++|..+++.++|.+.++.|
T Consensus 357 ~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 357 DSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred hhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3334444555555555555555 445799999999999999999999999999988865
No 219
>KOG2563|consensus
Probab=99.20 E-value=5.8e-11 Score=126.04 Aligned_cols=255 Identities=18% Similarity=0.153 Sum_probs=178.0
Q ss_pred ccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhccc-----ccCcch--hHHHHhhhHHHHHhhhhheec
Q psy11734 12 TFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSF-----TASWAN--VFYIFGAIAVLWFAFWCILCF 84 (817)
Q Consensus 12 ~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~-----~~gWr~--~f~i~~~~~~i~~~~~~~~~~ 84 (817)
+.-....+.+.|||++||..|..+-..+..+|.++|.++...+.+. ...|.- .|+....+..+.+++..+..+
T Consensus 157 im~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~ 236 (480)
T KOG2563|consen 157 ILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFT 236 (480)
T ss_pred hhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 3444567889999999999999999999999999999999999871 235666 466666666666666667677
Q ss_pred cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHH
Q psy11734 85 NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALL 164 (817)
Q Consensus 85 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (817)
++|+.++........ + .
T Consensus 237 ~~P~tPps~s~~~~~-------~--------~------------------------------------------------ 253 (480)
T KOG2563|consen 237 KKPPTPPSASQAALQ-------D--------A------------------------------------------------ 253 (480)
T ss_pred CCCCCCCchhHhhhh-------c--------C------------------------------------------------
Confidence 766655432221110 0 0
Q ss_pred HhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchh
Q psy11734 165 TLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVL 244 (817)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~ 244 (817)
.-....++.++|+++....+.+....+.+++..+.+..-+.. .|++...+|+.
T Consensus 254 --------------------------~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~i 306 (480)
T KOG2563|consen 254 --------------------------SFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYI 306 (480)
T ss_pred --------------------------cHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchh
Confidence 013357899999999999999999999999988877766655 58888999999
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHH-HHhhhccCC--ChhHHHHHHHHHHHHhhhcc
Q psy11734 245 SALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVG-ALAASYVGC--NTSMVAIFFTIGMAFMGFCY 321 (817)
Q Consensus 245 ~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~l~~~~~g~~~ 321 (817)
.....+++++++.+.|.+.||.++.+. ..........++ +.+...+.. +.+.......+.+++.....
T Consensus 307 g~l~iv~Gmlga~~~gii~Dktk~fk~---------~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~ 377 (480)
T KOG2563|consen 307 GALMIVAGMLGALASGIIADKTKKFKL---------TTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYL 377 (480)
T ss_pred HHHHHHHHHHHHHHHHhhhhhhhhHHH---------HHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCC
Confidence 999999999999999999999876543 133333333344 222222221 23334444444455554555
Q ss_pred ccc-cccccccCCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 322 ASI-RVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 322 ~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
|.- -.-.+..+|..-++..|+.|..+|+-+.+-..+.+...+..
T Consensus 378 Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~ 422 (480)
T KOG2563|consen 378 PIGFELGVETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDL 422 (480)
T ss_pred CcceeeeeeeccccCCcccceeEEeehhHHHHHHHHHHHHHhhcc
Confidence 544 33445578988899999999999987777777766665543
No 220
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.18 E-value=1.9e-10 Score=122.19 Aligned_cols=297 Identities=16% Similarity=0.138 Sum_probs=204.0
Q ss_pred cccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhH-HHH--hhhHHHHHhhhh
Q psy11734 4 MSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVF-YIF--GAIAVLWFAFWC 80 (817)
Q Consensus 4 l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f-~i~--~~~~~i~~~~~~ 80 (817)
+.|+|.+.....-.++++|..|+|||+++.++.....-+|.+++..+.+.+.+ .++=.-.. .+. +.+.+++.++..
T Consensus 98 l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~-~~s~~rL~~v~~~~a~i~~~l~~ia~ 176 (403)
T PF03209_consen 98 LYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLD-PFSPERLIQVIQGVALIALLLNLIAL 176 (403)
T ss_pred HHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHcc-ccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788888888899999999999999999999999999999999999998887 44322222 222 222222222222
Q ss_pred heeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHH
Q psy11734 81 ILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLS 160 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (817)
+ +.+|+.++..+.+++ ++
T Consensus 177 w--g~E~r~~~~~~~~~~-------------~~----------------------------------------------- 194 (403)
T PF03209_consen 177 W--GQEPRRSRRAAAAER-------------PR----------------------------------------------- 194 (403)
T ss_pred H--hcccCCcccccCCCC-------------CC-----------------------------------------------
Confidence 2 222222211100000 00
Q ss_pred HHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccc
Q psy11734 161 TALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAE 240 (817)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 240 (817)
....+.++++.++|+....++..++....++.=-..+-+|=-+++|+++.|
T Consensus 195 -----------------------------~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~e 245 (403)
T PF03209_consen 195 -----------------------------PPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGE 245 (403)
T ss_pred -----------------------------ccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHH
Confidence 001234778889999888888888888888877778888889999999999
Q ss_pred cchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc--CCChhHHHHHHHHHHHHh
Q psy11734 241 NGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAASYV--GCNTSMVAIFFTIGMAFM 317 (817)
Q Consensus 241 ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~ 317 (817)
+..+......+.++|....|++..| .++++. ...+...+.+++.++... ..+.+..-....+.+.+.
T Consensus 246 TT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~----------a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 246 TTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRT----------AALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCchHH----------HHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 9999999999999999999998874 444443 556666665555554332 224444445555555566
Q ss_pred hhccccccccccc-cCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccc
Q psy11734 318 GFCYASIRVNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVA 396 (817)
Q Consensus 318 g~~~~~~~~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (817)
|.........+.+ ..+++.|..+|.....+.+...++..+.|.+.|-.....
T Consensus 316 G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~--------------------------- 368 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALF--------------------------- 368 (403)
T ss_pred hHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------------------
Confidence 6555555445555 446899999999999999999999999999998752111
Q ss_pred cccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccc
Q psy11734 397 PLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGE 437 (817)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~ 437 (817)
.+....+|..+|.+=++..+++..+..-+.+++
T Consensus 369 --------~~~~~~aY~~VF~lEa~ll~~a~~ll~~l~~~~ 401 (403)
T PF03209_consen 369 --------GNSPALAYGVVFALEAVLLLAALVLLGRLDRRE 401 (403)
T ss_pred --------cCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 001234799999999999888887765554443
No 221
>KOG0255|consensus
Probab=99.15 E-value=1.6e-10 Score=133.64 Aligned_cols=277 Identities=18% Similarity=0.185 Sum_probs=174.5
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhh
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWC 80 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~ 80 (817)
+|+++|++.++....+..++.|++++|+|+.+..+ ......++.++++.++++.+ +|||.+++...++++..++ +
T Consensus 177 ~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~-~ 251 (521)
T KOG0255|consen 177 FRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL-W 251 (521)
T ss_pred HHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH-H
Confidence 59999999999999999999999999999999999 88888999999999998876 8999999999888877666 3
Q ss_pred heeccCCCCCCCCCHHHHh----HhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 81 ILCFNDPKSHPYISEKERK----YLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 81 ~~~~~~p~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
++. ||++|+...+++. +..++..+....+.+ .++....
T Consensus 252 ~l~---~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~~~--~~~~~~~--------------------------------- 293 (521)
T KOG0255|consen 252 FLP---PESPRWLLSKGRIDEAIKILKKIAKLNGRKLS--VKELLRL--------------------------------- 293 (521)
T ss_pred Hcc---CcChHHHHHcCchHHHHHHHHHHHhhcCCCCC--cHHHHHH---------------------------------
Confidence 333 3455544332221 111111110000000 0000000
Q ss_pred HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHH----HHHHHHHHhhchhhHHHH
Q psy11734 157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVG----HDYGLYLISTDLPKYMSE 232 (817)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~----~~~~~~~~~~~~p~~l~~ 232 (817)
-...+..+....+++..+.++++.|+.....+...+ ....+|+... -..
T Consensus 294 ----------------------~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~-----~~~ 346 (521)
T KOG0255|consen 294 ----------------------ELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSL-----NVS 346 (521)
T ss_pred ----------------------HHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhh-----hhh
Confidence 000000000011122346788888754333332222 2223333222 112
Q ss_pred hhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChh--HHHHHH
Q psy11734 233 VIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTS--MVAIFF 310 (817)
Q Consensus 233 ~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 310 (817)
..|.+.. ......+..........+...|+.|||.. ...+..+..++++...+...... ..+...
T Consensus 347 ~lg~~~~---~~~~~~~~~~~p~~~~~~~~~~~~gR~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (521)
T KOG0255|consen 347 GLGGNIY---LNFTLSGLVELPAYFRNGLLLPEFGRRPP----------LFLSLFLAGIGLLLFGWLPDDLGGWLHWILP 413 (521)
T ss_pred hcCchHH---HHHHHHHHHHhhHHHHHHHHHHHhCcHHH----------HHHHHHHHHHHHHHHHHhhccchhHHHHHHH
Confidence 1233222 22333333556666677899999988875 77788888888888777764433 455666
Q ss_pred HHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccce
Q psy11734 311 TIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGF 360 (817)
Q Consensus 311 ~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~ 360 (817)
.++.++.+........+..|+.| ..|..+.+..+....+|++++|.+.-.
T Consensus 414 ~~~~~~~~~~~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~ 464 (521)
T KOG0255|consen 414 LLGKFFIGSAFNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLL 464 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66666666666667888889888 589999999999999999999988543
No 222
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.14 E-value=2.2e-08 Score=106.68 Aligned_cols=187 Identities=18% Similarity=0.136 Sum_probs=143.8
Q ss_pred hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhcccccc
Q psy11734 595 PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRDILS 673 (817)
Q Consensus 595 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~~~~ 673 (817)
.++++..+|+........+....+++.--..+-+|-.+++|+++.+...+......+..+|..+.|++..| .++++
T Consensus 200 a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~--- 276 (403)
T PF03209_consen 200 AWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKR--- 276 (403)
T ss_pred HHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH---
Confidence 35677788888888888888888888888889999999999999999999999999999999999998884 33333
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhc--CchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHH
Q psy11734 674 RTNVRKVFATLGAVLPGVGALAASYVG--CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVS 750 (817)
Q Consensus 674 ~~~~r~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g 750 (817)
...+++..+.+++.++.... .+.+......++.+++.+.......+...+..+ ++.|+.+|.-...+.++
T Consensus 277 -------~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A 349 (403)
T PF03209_consen 277 -------TAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIA 349 (403)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHH
Confidence 23466666666666655442 255677777777777777655555566666665 88999999999999999
Q ss_pred HhHHHHHHHHhhcCC----c---cccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 751 GMVAPLTVGFLTQNK----T---LLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 751 ~~i~p~~~g~~~~~~----g---~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
..++..++|.+.|.. + ...|..+|.+=+.+.+++.++....
T Consensus 350 ~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 350 RGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999988842 1 1347778887777777777666554
No 223
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.14 E-value=4.1e-10 Score=123.07 Aligned_cols=252 Identities=14% Similarity=0.110 Sum_probs=191.3
Q ss_pred chhhhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhheeccC
Q psy11734 14 PALCTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILCFND 86 (817)
Q Consensus 14 ~~~~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~ 86 (817)
..=.++..+..+ ++||.+..+.-.....+|..+...+...+.. ...||+..-++.++++.+..++.++-.+|+
T Consensus 131 iPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER 210 (467)
T COG2211 131 IPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKER 210 (467)
T ss_pred CchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 333455556655 5899999999999999998777777666654 245899999999999998888888877776
Q ss_pred CCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHh
Q psy11734 87 PKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTL 166 (817)
Q Consensus 87 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (817)
+.+....++..+
T Consensus 211 ~~~~~~~~~~~~-------------------------------------------------------------------- 222 (467)
T COG2211 211 VVETQPTKTGVK-------------------------------------------------------------------- 222 (467)
T ss_pred cCccccCccccc--------------------------------------------------------------------
Confidence 542211000000
Q ss_pred hhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhh
Q psy11734 167 LTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSA 246 (817)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~ 246 (817)
++.+..+..++|||++....+...+......-.....+.|.+...|.+...+.....
T Consensus 223 -----------------------~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~ 279 (467)
T COG2211 223 -----------------------LKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLL 279 (467)
T ss_pred -----------------------ccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHH
Confidence 001223457889999998888888887777777788888888888888888888888
Q ss_pred hhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhhcccccc
Q psy11734 247 LPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGFCYASIR 325 (817)
Q Consensus 247 ~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~~~~~~~ 325 (817)
....+.+++.++..++++|+|+|+. ..++.++..++.+.+.+.+.+ ....++..++...+.+...+..+
T Consensus 280 ~~~~~~l~~~~~~p~L~~~~gkk~~----------~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~w 349 (467)
T COG2211 280 ASGAGLLIGLILWPRLVKKFGKKKL----------FLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPW 349 (467)
T ss_pred HHHHHHHHHHHhHHHHHHHhchHHH----------HHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccH
Confidence 8888888999999999999999996 777777777777777777644 44455555666777777777778
Q ss_pred ccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 326 VNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 326 ~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
+.+.|... +..|..+|.+++++=+|.+++..+.|.+++..|
T Consensus 350 am~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 350 AMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 88777553 346889999999999999999999999998876
No 224
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.11 E-value=1.5e-10 Score=132.06 Aligned_cols=254 Identities=9% Similarity=-0.058 Sum_probs=160.1
Q ss_pred ccchhhhhhhhcc-CCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc------cccCcchhHHHHhhhHHHHHhhhhheec
Q psy11734 12 TFPALCTLLAQWS-PPNERSFMTALVFAGVQLGSVLATFCSGLIMS------FTASWANVFYIFGAIAVLWFAFWCILCF 84 (817)
Q Consensus 12 ~~~~~~~~i~~~~-p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~------~~~gWr~~f~i~~~~~~i~~~~~~~~~~ 84 (817)
..+.-.++..|.. +++||.+..+.-.....+|..+.+.+...+.+ ...+|+...++.+++.++.....++..|
T Consensus 123 ~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~ 202 (473)
T PRK10429 123 MDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVH 202 (473)
T ss_pred HcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCce
Confidence 3444557778888 58999999988666666665555554443322 0236888888887777776666666566
Q ss_pred cCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHH
Q psy11734 85 NDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALL 164 (817)
Q Consensus 85 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (817)
|+++.+.. +.++ +++.+
T Consensus 203 e~~~~~~~-~~~~---------------~~~~~----------------------------------------------- 219 (473)
T PRK10429 203 EVYSSDNQ-VSAE---------------GSHLT----------------------------------------------- 219 (473)
T ss_pred ecCCcccc-cccc---------------ccCCC-----------------------------------------------
Confidence 65321100 0000 00000
Q ss_pred HhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchh
Q psy11734 165 TLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVL 244 (817)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~ 244 (817)
.++.++.+++||.++...+..++.....+....+.+.|++.. ..+....+.+
T Consensus 220 ---------------------------~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~-~~~~~~~~~~ 271 (473)
T PRK10429 220 ---------------------------LKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYV-IGDADLFPYY 271 (473)
T ss_pred ---------------------------HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEE-CCCHHHHHHH
Confidence 122355678999998888888888877777777777666554 3345555666
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhc---c-CCChhHHHHHHHHHHHHhhhc
Q psy11734 245 SALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASY---V-GCNTSMVAIFFTIGMAFMGFC 320 (817)
Q Consensus 245 ~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~l~~~~~g~~ 320 (817)
.....++.+++.++.++++||+|+|+. ...+..+..++.+.+.. . +.+.+...+...+.+.+.+..
T Consensus 272 ~~~~~i~~ii~~~~~~~l~~r~gkk~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~ 341 (473)
T PRK10429 272 LSYAGAANLVTLILFPRLVKSLSRRIL----------WAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALF 341 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCcHHH----------HHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHH
Confidence 666678899999999999999999985 44444443333332221 2 223333333334444444444
Q ss_pred cccccccccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 321 YASIRVNPIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 321 ~~~~~~~~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
.....+...|..+ +..|..+|..++...++.++++.+.|.+.+..|
T Consensus 342 ~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 342 WVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 4544555555432 346779999999999999999999999998775
No 225
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.08 E-value=1.1e-09 Score=116.11 Aligned_cols=189 Identities=15% Similarity=0.114 Sum_probs=147.8
Q ss_pred CchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734 193 KTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL 272 (817)
Q Consensus 193 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~ 272 (817)
+...+++.+++++....++.++..-+..+.......|-.+.+|.+..+..+......+..++|+++.|++.||++.|++
T Consensus 242 ~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~v- 320 (438)
T COG2270 242 KSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPV- 320 (438)
T ss_pred HHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcee-
Confidence 4457888899999999999999999999999999999998899999999999999999999999999999999999986
Q ss_pred cchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-cccccccCCCchhHHHHHHHhhhhhcc
Q psy11734 273 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RVNPIDLSPNFSGTIMALSNGLGCVSG 351 (817)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~~p~~~g~a~g~~~~~~~lg~ 351 (817)
+..+.++..+..+...+...+.......+.++.+.. ...+.. ......++|++.+..+|+.+..++..+
T Consensus 321 ---------l~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G-~~qA~SRSy~~~lvp~~k~~~fFglyaltgra~S 390 (438)
T COG2270 321 ---------LMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLG-GAQASSRSYLARLVPKGKEGRFFGLYALTGRAAS 390 (438)
T ss_pred ---------ehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcc-hHHHHHHHHHHHhCCCccccceeehhhhhhhHHH
Confidence 666666666555555555434333333344344333 333434 444455666899999999999999999
Q ss_pred cccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhhe
Q psy11734 352 MVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFV 431 (817)
Q Consensus 352 ~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~ 431 (817)
.+||...+.+.+.+| +-|..+....++..++.++..
T Consensus 391 ~~gp~lv~v~t~iTg--------------------------------------------~~r~g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 391 FLGPFLVAVITQITG--------------------------------------------SSRAGVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHHHHHHHHHHhc--------------------------------------------chhhHHHHHHHHHHhhHhhEE
Confidence 999999999988875 356677777778888888777
Q ss_pred eeccc
Q psy11734 432 LFGSG 436 (817)
Q Consensus 432 ~~~~~ 436 (817)
..+.+
T Consensus 427 ~v~~~ 431 (438)
T COG2270 427 RVKVP 431 (438)
T ss_pred eecCC
Confidence 76644
No 226
>KOG2615|consensus
Probab=99.08 E-value=2.5e-10 Score=118.29 Aligned_cols=275 Identities=15% Similarity=0.127 Sum_probs=157.0
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-cCcchhHHHHhhhHHHHH----
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-ASWANVFYIFGAIAVLWF---- 76 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-~gWr~~f~i~~~~~~i~~---- 76 (817)
|++.|+.-| ...+..++++|.+++|+|+++++..+..+++|-++||.+||++.++. ..=+..|.....+..+..
T Consensus 128 R~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v 206 (451)
T KOG2615|consen 128 RFLGGIFKG-NLSVIRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDV 206 (451)
T ss_pred HHhhhhccC-chHHHHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHH
Confidence 888999888 67788999999999999999999999999999999999999998711 112222333221111111
Q ss_pred hhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhH
Q psy11734 77 AFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGL 156 (817)
Q Consensus 77 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (817)
.+..+++||+=+.+++. +++.+..+.... +.+..+++|.+
T Consensus 207 ~~~~~~lpETL~~rk~~--~~~~~~~~~~~~--~~~~~~~~~~~------------------------------------ 246 (451)
T KOG2615|consen 207 TFFPWFLPETLPLRKRN--DEHSTLQEAADD--RLALLKFARIF------------------------------------ 246 (451)
T ss_pred HHHHHhCCccccchhhc--ccccchhhhhhh--hhhhcchhhhh------------------------------------
Confidence 12233344431111111 111101110000 00101111100
Q ss_pred HHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchh------HHHHHHHHHHHHHHHHHHhhchhhHH
Q psy11734 157 GFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLP------VWSLIISEVGHDYGLYLISTDLPKYM 230 (817)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~i~~~~~~~~~~~~~~~~p~~l 230 (817)
-....||++ .+..+...-+.+.-.|......+..+
T Consensus 247 ---------------------------------------~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l 287 (451)
T KOG2615|consen 247 ---------------------------------------KVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFL 287 (451)
T ss_pred ---------------------------------------hhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHh
Confidence 012223332 12222222222222333333333333
Q ss_pred -HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHH
Q psy11734 231 -SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIF 309 (817)
Q Consensus 231 -~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (817)
.+.+|+++.+.|.+....++.+.+.+..-.+..||..... +..+..++.++...++++.... ........
T Consensus 288 ~~~rfg~ss~~~G~vl~~tGl~m~~~ql~~~~~l~~~~~~~--------~a~l~~~l~~~vP~~llls~~~-~~~~l~~~ 358 (451)
T KOG2615|consen 288 THGRFGYSSMQQGKVLSTTGLLMLVIQLALVPILPRYKGNI--------KAVLLFSLLLIVPAFLLLSLAR-TPVVLYLG 358 (451)
T ss_pred hcCccCCChhhheeeeehhhHHHHHHHHhccccccccccch--------hhHHHHHHHHHHHHHHHHhccc-cchhhhHH
Confidence 4568999999999999999988888877777777755211 1124444444444444444433 33344444
Q ss_pred HHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 310 FTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 310 ~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..+-.+......+..........| .+||+++|+..+.+.++-++||.+.|.+....
T Consensus 359 s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~Ws 415 (451)
T KOG2615|consen 359 STLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSWS 415 (451)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEEe
Confidence 444444444455555555555555 79999999999999999999999999887653
No 227
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.07 E-value=5.4e-10 Score=121.04 Aligned_cols=187 Identities=12% Similarity=0.146 Sum_probs=137.0
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh---hCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734 196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV---IGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL 272 (817)
Q Consensus 196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~---~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~ 272 (817)
..+++|+|++|...+........++.+-...|.|++.. .+.+....|++.+...+..++...+.+++.+|+|.|+.
T Consensus 213 ~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~- 291 (412)
T PF01306_consen 213 VLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNL- 291 (412)
T ss_dssp HHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhH-
Confidence 56899999999988887777777777655677777652 24455668888888899999999999999999999986
Q ss_pred cchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHH-Hhhhhhc
Q psy11734 273 SRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALS-NGLGCVS 350 (817)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~-~~~~~lg 350 (817)
+.++..++.+=.....+.+ +++.....-.+-+.-........--+.++..| |..++...+. +...++|
T Consensus 292 ---------Lllag~i~~iRi~~~~~~~-~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~ 361 (412)
T PF01306_consen 292 ---------LLLAGVIMAIRIIGSGFAT-NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIG 361 (412)
T ss_dssp ---------HHHHHHHHHHHHHHHHT---SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHH
T ss_pred ---------HHHHHHHHHHHHHHHhhhc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHH
Confidence 6666666666666666655 55566665555555555555555556666555 7788999985 6888899
Q ss_pred ccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhh
Q psy11734 351 GMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFF 430 (817)
Q Consensus 351 ~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~ 430 (817)
..+.+.++|.+.|+. |++.+|++++++.++..++.
T Consensus 362 ~~i~s~~~G~lyd~~---------------------------------------------G~~~tylimg~iv~~~~li~ 396 (412)
T PF01306_consen 362 IIILSPLAGYLYDRI---------------------------------------------GFQHTYLIMGLIVLPFTLIS 396 (412)
T ss_dssp HHHHHHHHHHHHHHH---------------------------------------------HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhHHhhHhhc---------------------------------------------CcHHHHHHHHHHHHHHHHHh
Confidence 999999999999997 68999999998888777665
Q ss_pred eeeccccc
Q psy11734 431 VLFGSGEV 438 (817)
Q Consensus 431 ~~~~~~~~ 438 (817)
.+.-++++
T Consensus 397 ~f~l~~~~ 404 (412)
T PF01306_consen 397 AFTLKKDK 404 (412)
T ss_dssp HHHS--SS
T ss_pred eeeecCCC
Confidence 55544443
No 228
>KOG3626|consensus
Probab=99.06 E-value=1.7e-09 Score=123.28 Aligned_cols=197 Identities=14% Similarity=0.152 Sum_probs=142.3
Q ss_pred ccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccC------------------cchh
Q psy11734 3 EMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTAS------------------WANV 64 (817)
Q Consensus 3 ~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~g------------------Wr~~ 64 (817)
++.|+|+..++|...+++-|...+++-+..+|+..+...+|+++|..+|++....+.+ |.--
T Consensus 245 ~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlG 324 (735)
T KOG3626|consen 245 LLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLG 324 (735)
T ss_pred HHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHH
Confidence 5789999999999999999999999999999999999999999999999998862211 4555
Q ss_pred HHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhcccccccc
Q psy11734 65 FYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGIL 144 (817)
Q Consensus 65 f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (817)
|++.+.+.++..+..+++=++.|++.++.+.++.+....+.. ...++..+..
T Consensus 325 FLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~-------------------------- 376 (735)
T KOG3626|consen 325 FLICGALLLFSAVPLFFFPKELPKSQKRKRARDLHVLKTESG--GAKSDKTFGK-------------------------- 376 (735)
T ss_pred HHHHHHHHHHHHHHHHhCcccCccccccchhhhhcccccccc--cccCCcchhh--------------------------
Confidence 666777777776666666444454433211111111100000 0000000000
Q ss_pred ccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhh
Q psy11734 145 SQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLIST 224 (817)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~ 224 (817)
.-++-+...+++++||.+....+...+....+.++.+
T Consensus 377 -------------------------------------------~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~t 413 (735)
T KOG3626|consen 377 -------------------------------------------KIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYIT 413 (735)
T ss_pred -------------------------------------------hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHH
Confidence 0011234567999999999999999999999999999
Q ss_pred chhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcC
Q psy11734 225 DLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARD 270 (817)
Q Consensus 225 ~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~ 270 (817)
++|.|+++.+|.++..+..++....+ +..+|.+++|++..|+..+.
T Consensus 414 FlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~ 460 (735)
T KOG3626|consen 414 FLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSA 460 (735)
T ss_pred hhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccH
Confidence 99999999999999999988866554 56688899999999976543
No 229
>PRK11462 putative transporter; Provisional
Probab=99.01 E-value=3.2e-09 Score=120.40 Aligned_cols=242 Identities=12% Similarity=0.067 Sum_probs=145.8
Q ss_pred hhhhhhccC-CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-------cCcchhHHHHhhhHHHHHhhhhheeccCCC
Q psy11734 17 CTLLAQWSP-PNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-------ASWANVFYIFGAIAVLWFAFWCILCFNDPK 88 (817)
Q Consensus 17 ~~~i~~~~p-~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-------~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~ 88 (817)
.++..|..+ +|||.+..++-..+..+|..+++.+...+.+ . .||+....+.+++.+++..+.+...||+++
T Consensus 131 ~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~-~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~ 209 (460)
T PRK11462 131 CALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVN-LIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVE 209 (460)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccC
Confidence 455666666 6899999999999999988888777655544 2 368888888887777776666655554422
Q ss_pred CCCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhh
Q psy11734 89 SHPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLT 168 (817)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (817)
+++ ++.
T Consensus 210 ~~~-----~~~--------------------------------------------------------------------- 215 (460)
T PRK11462 210 APP-----TTT--------------------------------------------------------------------- 215 (460)
T ss_pred CCc-----cCC---------------------------------------------------------------------
Confidence 110 000
Q ss_pred hcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhh
Q psy11734 169 PLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALP 248 (817)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~ 248 (817)
+.++..+.+++||.++......++..............|.+...|. +...+.+....
T Consensus 216 ----------------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~-~~~~~~~l~~~ 272 (460)
T PRK11462 216 ----------------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGT-PEVFVAFLTTY 272 (460)
T ss_pred ----------------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCC-hHHHHHHHHHH
Confidence 0012356778898887776665555554444444444444443343 23344556677
Q ss_pred HHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCC-hhHHHHHHHHHHHHhhhcccccccc
Q psy11734 249 FLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCN-TSMVAIFFTIGMAFMGFCYASIRVN 327 (817)
Q Consensus 249 ~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~g~~~~~~~~~ 327 (817)
.++++++.+++++++||+++|+. ...+..+..+....+.+.+.+ .....+...+.+.+.+...+.....
T Consensus 273 ~i~~iig~~l~~~l~~r~gkk~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m 342 (460)
T PRK11462 273 CVGNLIGSALAKPLTDWKCKVTI----------FWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVM 342 (460)
T ss_pred HHHHHHHHHHHHHHHHHhChHHH----------HHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999998864 332222222222222222222 2222233333333333333333444
Q ss_pred ccccCC--------CchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 328 PIDLSP--------NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 328 ~~~~~p--------~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
..|..+ +..|..++..++...+|.++++.+.|.+.+..|
T Consensus 343 ~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 343 MSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 444332 234666788889999999999999999988754
No 230
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.01 E-value=5.6e-11 Score=135.46 Aligned_cols=294 Identities=14% Similarity=0.089 Sum_probs=3.0
Q ss_pred cccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccc-----------------cC----
Q psy11734 2 VEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFT-----------------AS---- 60 (817)
Q Consensus 2 R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~-----------------~g---- 60 (817)
.++.|+|+...+++..+++-|..++++-+..+|++.+...+|+++|..+++.....+ ..
T Consensus 148 q~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGA 227 (539)
T PF03137_consen 148 QLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGA 227 (539)
T ss_dssp ----SSS-------------------------------------------------------------------------
T ss_pred HHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHH
Confidence 478999999999999999999999999999999999999999999999999887511 12
Q ss_pred cchhHHHHhhhHHHHHhhhhheeccCCCCCCCCCHHHHhHhhhh-ccccccccccccccCccccchhhhhhhhchhhccc
Q psy11734 61 WANVFYIFGAIAVLWFAFWCILCFNDPKSHPYISEKERKYLLDS-IGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHI 139 (817)
Q Consensus 61 Wr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (817)
|=--|++.+.+.++..+..+.+-|+.|+.++..++++.+....+ ....+..++++.. +
T Consensus 228 WWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~------------------- 286 (539)
T PF03137_consen 228 WWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEKESSERKEEDSDKDSFKDPKSKK--S------------------- 286 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchhhhhhcchhhhhhhccccccccc--c-------------------
Confidence 44445555555555555555543333433111111111000000 0000000000000 0
Q ss_pred cccccccccCCccchhHHHHHHHHHHhhhhcccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHH
Q psy11734 140 PGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGL 219 (817)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~ 219 (817)
....-++.+...+++++||.+....+...+.....
T Consensus 287 ---------------------------------------------~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~ 321 (539)
T PF03137_consen 287 ---------------------------------------------FGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIV 321 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------------------hhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 00001122445679999999999999999999999
Q ss_pred HHHhhchhhHHHHhhCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHH-HHHhhh
Q psy11734 220 YLISTDLPKYMSEVIGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGV-GALAAS 297 (817)
Q Consensus 220 ~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 297 (817)
.++.++.|.|+|..++.++.++.++.....+ +..+|.+++|++.+|+..+.. +.-+.......+.... ...++.
T Consensus 322 ~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~----~~~~~~~v~~~v~~~~~~~~~~~ 397 (539)
T PF03137_consen 322 SGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSAR----GAAKFCIVVSIVSVILYSPLFFL 397 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHH----HHHHHHHHHHHHHHHHHHHHHee
Confidence 9999999999999999999999988766554 777899999999999865421 1111111111111111 111111
Q ss_pred ccCC--------------------------------------------C----hhHHHHHHHHHHHH-hhhccccccccc
Q psy11734 298 YVGC--------------------------------------------N----TSMVAIFFTIGMAF-MGFCYASIRVNP 328 (817)
Q Consensus 298 ~~~~--------------------------------------------~----~~~~~~~~~l~~~~-~g~~~~~~~~~~ 328 (817)
..++ + .....+.+++..+. .....+...+..
T Consensus 398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~L 477 (539)
T PF03137_consen 398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITL 477 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeee
Confidence 1100 0 00111111111222 222344446666
Q ss_pred cccCCCchhHHHHHHHhhhh-hcccccccccceecccc
Q psy11734 329 IDLSPNFSGTIMALSNGLGC-VSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 329 ~~~~p~~~g~a~g~~~~~~~-lg~~~~~~i~g~l~~~~ 365 (817)
..+++++|+.|.|+...+.+ +|..-||.++|.+.|..
T Consensus 478 R~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~t 515 (539)
T PF03137_consen 478 RCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDST 515 (539)
T ss_dssp --------------------------------------
T ss_pred ccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhh
Confidence 77888999999999998755 68899999999999985
No 231
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.01 E-value=3.3e-09 Score=117.09 Aligned_cols=192 Identities=17% Similarity=0.160 Sum_probs=143.6
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734 196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT 275 (817)
Q Consensus 196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~ 275 (817)
..+++|||++....+..++..........+.+.|+++.-|++....+.......++-++.....+++..|+|.++.
T Consensus 200 ~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~l---- 275 (400)
T PF03825_consen 200 ALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWL---- 275 (400)
T ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH----
Confidence 4579999999998888888888888889999999998533788888888888888899999999999999999885
Q ss_pred hhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHH----HHHHhhhccccccccccccCC-CchhHHHHHHHhhh-hh
Q psy11734 276 NVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTI----GMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLG-CV 349 (817)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~-~l 349 (817)
+.++.+..++=..+.....++.+.......+ -+...+........++.+..| +.|+++.++.+.+. .+
T Consensus 276 ------l~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Gl 349 (400)
T PF03825_consen 276 ------LLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGL 349 (400)
T ss_pred ------HHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhH
Confidence 7777777776665665553344443333333 344444555556677777555 78999999999875 59
Q ss_pred cccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhh
Q psy11734 350 SGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVF 429 (817)
Q Consensus 350 g~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~ 429 (817)
|+++|..++|.+.|+.|.. ..-.|...+.+.+++.++..++
T Consensus 350 g~~iG~~igG~l~~~~g~~---------------------------------------~~~~~~~~~~v~a~~~~~~~~~ 390 (400)
T PF03825_consen 350 GGAIGSLIGGWLYDAFGAR---------------------------------------GMFDWSAVFLVFAVMALVILVL 390 (400)
T ss_pred HHHHHHHHHHHHHHHhcch---------------------------------------hhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987510 0124777888888877777766
Q ss_pred heeeccc
Q psy11734 430 FVLFGSG 436 (817)
Q Consensus 430 ~~~~~~~ 436 (817)
+.++-|+
T Consensus 391 f~~~fk~ 397 (400)
T PF03825_consen 391 FVILFKP 397 (400)
T ss_pred HHhhccC
Confidence 6555444
No 232
>KOG3626|consensus
Probab=98.98 E-value=1.7e-07 Score=107.11 Aligned_cols=283 Identities=15% Similarity=0.127 Sum_probs=192.9
Q ss_pred HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------
Q psy11734 229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV--------- 299 (817)
Q Consensus 229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 299 (817)
-.++.++++..+.|++..-.-+++.+......+..-|..|.++ +..|.++++++.++....
T Consensus 122 tiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~----------Ig~G~~~m~lgsll~alPHf~~~~y~~ 191 (735)
T KOG3626|consen 122 TIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRW----------IGIGLVLMGLGSLLFALPHFFSGPYEY 191 (735)
T ss_pred hhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccce----------eeechhHHHHHHHHHhChHHhcCcchh
Confidence 3456688999999999999999999999999999999888886 778888888777776552
Q ss_pred -----------C---------------------------CChhHHHHHHHHHHHHhhhc----cccccccccccCC-Cch
Q psy11734 300 -----------G---------------------------CNTSMVAIFFTIGMAFMGFC----YASIRVNPIDLSP-NFS 336 (817)
Q Consensus 300 -----------~---------------------------~~~~~~~~~~~l~~~~~g~~----~~~~~~~~~~~~p-~~~ 336 (817)
+ .+....+++++++-...|.+ ++.-..++.|... ++.
T Consensus 192 ~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~S 271 (735)
T KOG3626|consen 192 ELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNS 271 (735)
T ss_pred hhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCC
Confidence 0 00111333333333333333 3333667777665 678
Q ss_pred hHHHHHHHhhhhhcccccccccceecccccccC--CCCCCCCCccchhhcccCccccccccccccccccccCCccchhHH
Q psy11734 337 GTIMALSNGLGCVSGMVAPLTVGFLTQNIISIN--PIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRV 414 (817)
Q Consensus 337 g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (817)
+.-.|+.++++-+|-++|=.+++.......++. +..+.+.. ......|-.
T Consensus 272 plYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~D----------------------------PrWIGAWWl 323 (735)
T KOG3626|consen 272 PLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTD----------------------------PRWIGAWWL 323 (735)
T ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCC----------------------------cchhhHHHH
Confidence 899999999999999999888888877654331 11111111 112346888
Q ss_pred HHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCC
Q psy11734 415 VFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESC 494 (817)
Q Consensus 415 ~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (817)
-|++.+.+.++..+..++++|+.++..+++..+ + .+ .+
T Consensus 324 GFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~-------------------------------~--~~---------~~ 361 (735)
T KOG3626|consen 324 GFLICGALLLFSAVPLFFFPKELPKSQKRKRAR-------------------------------D--LH---------VL 361 (735)
T ss_pred HHHHHHHHHHHHHHHHHhCcccCccccccchhh-------------------------------h--hc---------cc
Confidence 888999999999999999988876543321000 0 00 00
Q ss_pred CCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhc
Q psy11734 495 FPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHS 574 (817)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~ 574 (817)
. ++...++..+++.++. .
T Consensus 362 --k---~~~~~~~~~~~~~~~i-------------------------------------------------------k-- 379 (735)
T KOG3626|consen 362 --K---TESGGAKSDKTFGKKI-------------------------------------------------------K-- 379 (735)
T ss_pred --c---cccccccCCcchhhhH-------------------------------------------------------H--
Confidence 0 0000001011110000 0
Q ss_pred chHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHH-HHHH
Q psy11734 575 GPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPF-LIMW 653 (817)
Q Consensus 575 s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~-~~~~ 653 (817)
.+ ....+++++||.+....++..+....+.++.+|+|.|+++.+|.++..+..+..... .+..
T Consensus 380 df----------------p~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~ 443 (735)
T KOG3626|consen 380 DF----------------PKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAA 443 (735)
T ss_pred HH----------------HHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhh
Confidence 11 134688999999999999999999999999999999999999999999998886655 4777
Q ss_pred HHHHHHHHHHhhhhcc
Q psy11734 654 LVSMSSSALADYLIVR 669 (817)
Q Consensus 654 ig~~~~g~l~dr~g~~ 669 (817)
+|.+++|++..|+.-+
T Consensus 444 ~Gi~lGG~iikkfkl~ 459 (735)
T KOG3626|consen 444 VGIFLGGLIIKKFKLS 459 (735)
T ss_pred hhhhccceeeeeeccc
Confidence 8999999999998744
No 233
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=98.95 E-value=4.7e-08 Score=106.70 Aligned_cols=161 Identities=12% Similarity=0.033 Sum_probs=122.7
Q ss_pred HhhHHHHHHHHhCCChhH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcC
Q psy11734 623 SSDLPKYMSQVIGLSVAE-NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGC 701 (817)
Q Consensus 623 ~~~~p~~l~~~~g~s~~~-~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 701 (817)
..+...++.+.+|+|.++ .+.+.+.+..+-.+..+.+|+++||+|.|+++ ..+.+...+..++..+..
T Consensus 45 ~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL----------~l~~l~Wsl~t~L~~fa~- 113 (511)
T TIGR00806 45 ESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVL----------VLQALSFVCVWLLLLLGT- 113 (511)
T ss_pred HHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHH----------HHHHHHHHHHHHHHHHHH-
Confidence 445666788789999999 99999999999999999999999999988764 466666666666666653
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHH
Q psy11734 702 NTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLT 780 (817)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~ 780 (817)
+.....+.-++.+.+.+... ....++...+| ++|++++|+.+....+|.++++.+.++ ....+-..|....++..+.
T Consensus 114 Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s 191 (511)
T TIGR00806 114 SVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVF 191 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHH
Confidence 45556666666666666666 66677777777 889999999999999999999999999 4455433455556566666
Q ss_pred HHHHHHHHHHhccCcc
Q psy11734 781 LFISNVFFVLFGSGEV 796 (817)
Q Consensus 781 ~~i~~~~~~~~~~~~~ 796 (817)
..++.+..++++++++
T Consensus 192 ~~~a~~~a~~LP~~~~ 207 (511)
T TIGR00806 192 MTFSVFLALFLKRPKR 207 (511)
T ss_pred HHHHHHHHHhCCCCch
Confidence 6667777777765444
No 234
>KOG3762|consensus
Probab=98.93 E-value=1.2e-08 Score=110.60 Aligned_cols=178 Identities=20% Similarity=0.149 Sum_probs=129.8
Q ss_pred hhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 599 ILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 599 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
++.+++..+..+...+...+.-.+.+++=-++++ .+-.+..-|.....-..+-++.-++.+++.+|+|+-+++.
T Consensus 367 ~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~----- 440 (618)
T KOG3762|consen 367 VFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMY----- 440 (618)
T ss_pred HhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceee-----
Confidence 4445554444444444444444445555445555 5655666676666777788888899999999999998864
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHH-HHHhHHHH
Q psy11734 679 KVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAPL 756 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~-~g~~i~p~ 756 (817)
.+..+.++=++.+.+. .++|..+.+-++.+...+..+..+.++++...| +.++++.|+...... +|-.+|++
T Consensus 441 -----lgLa~~~~Rf~~~S~L-~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gsl 514 (618)
T KOG3762|consen 441 -----LGLACNVGRFLYYSYL-QNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSL 514 (618)
T ss_pred -----ehhhHHHHHHHHHHHh-cCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhh
Confidence 6666666655555555 489999999999999999888888888988887 789999999876655 68999999
Q ss_pred HHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 757 TVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 757 ~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
++|.+.+..+ -+..|...++.+++.++.+...
T Consensus 515 IGG~~v~~fg---~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 515 IGGFVVERFG---ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhhheeeh---hHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999976 4566776666666666555544
No 235
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.92 E-value=8.9e-09 Score=111.66 Aligned_cols=188 Identities=19% Similarity=0.233 Sum_probs=154.8
Q ss_pred HHhhcCH-hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC----CChhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhccc
Q psy11734 597 AAILSSL-PVWSLIISEVGHDYGFYLISSDLPKYMSQVIG----LSVAENGVLSALPFLIMWLVSMSSSALADY-LIVRD 670 (817)
Q Consensus 597 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr-~g~~~ 670 (817)
+..+++| .++.+...-+.--+++|++-..+-.|+....+ +|.+++.-+++.+....-...+++||++|| +|+|+
T Consensus 14 ~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~ 93 (498)
T COG3104 14 MKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRR 93 (498)
T ss_pred cccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhH
Confidence 4456665 47778888899999999999999999998888 999999999999999999999999999999 57776
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHhhc-CchHHHHHHHHHHHHHHhhhhhhhhhhccccCCC---chHHHHHHHHHH
Q psy11734 671 ILSRTNVRKVFATLGAVLPGVGALAASYVG-CNTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN---FSGTIMALSNGL 746 (817)
Q Consensus 671 ~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~ 746 (817)
++ +.+.++..++.+++.... .++....+.+.+...+.+..-+...+...|.+|+ +|-.+.++....
T Consensus 94 tI----------~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~ 163 (498)
T COG3104 94 TI----------VLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMG 163 (498)
T ss_pred HH----------HHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEE
Confidence 64 588888888988888763 3455555555555566677777777778887762 378888888999
Q ss_pred HHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCccc
Q psy11734 747 GCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGEVQ 797 (817)
Q Consensus 747 ~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 797 (817)
.++|+.++|.+.+++.++.| |+..|...++...++.+.++..+++.+.
T Consensus 164 iNiGsl~~p~i~~~~~~~~g---~~~gF~~aavGm~~gl~~f~~~~r~~~~ 211 (498)
T COG3104 164 INIGSLIAPIITGLLAINYG---WHVGFGLAAVGMIIGLVIFLLGRRHVKG 211 (498)
T ss_pred eehHHHHHHHHHHHHHHhhC---HHHHHHHHHHHHHHHHHHHHHccchhcC
Confidence 99999999999999999987 9999999999999999998888665543
No 236
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.85 E-value=2e-07 Score=104.46 Aligned_cols=183 Identities=15% Similarity=0.097 Sum_probs=130.9
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhh----hhcccccccchhh
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADY----LIVRDILSRTNVR 678 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr----~g~~~~~~~~~~r 678 (817)
++...+....+..++++.....+++.|+++ +|.+....+.......+.+++..++.|+++|| +|||+.
T Consensus 4 ~~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp------- 75 (477)
T TIGR01301 4 RKLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRP------- 75 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHH-------
Confidence 345556666677777888888889998866 89999999999999999999999999999995 888653
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC------------ch----HHHHHHHHHHHHHHhhhhhhhhhhccccCC-Cch--HHH
Q psy11734 679 KVFATLGAVLPGVGALAASYVGC------------NT----SMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFS--GTI 739 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~~~------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--g~~ 739 (817)
++..+.....++++++.+... +. +..+..+.+.-+..+...++..+...|..| ++| +.+
T Consensus 76 --~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a 153 (477)
T TIGR01301 76 --FIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIA 153 (477)
T ss_pred --HHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHH
Confidence 345556666666666655321 00 112222333344555566677788999888 433 689
Q ss_pred HHHHHHHHHHHHhHHHHHHHHh--hcCCc----------cccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 740 MALSNGLGCVSGMVAPLTVGFL--TQNKT----------LLEWRVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 740 ~g~~~~~~~~g~~i~p~~~g~~--~~~~g----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
.+..+...++|+.+++.+.+.. .+..+ ..+++..|++.+++.+++.+...+..+++
T Consensus 154 ~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~ 221 (477)
T TIGR01301 154 NAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKEN 221 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeecc
Confidence 9999999999999999998864 22110 02578899998888888887777765443
No 237
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=98.83 E-value=4.2e-10 Score=128.36 Aligned_cols=381 Identities=13% Similarity=0.095 Sum_probs=1.3
Q ss_pred HHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccC---C----
Q psy11734 229 YMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVG---C---- 301 (817)
Q Consensus 229 ~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---- 301 (817)
-+++.++++..++|++.+...++.++..++..+..+|..|.|+ +..|.++++++.+++.... .
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprw----------ig~g~~~~~~g~~l~~lPhf~~~~y~~ 97 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRW----------IGIGALLMGLGSLLFALPHFLSGPYSY 97 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcce----------eeecHHHHHHHHHHHhccHhhcCCCcc
Confidence 4556689999999999999999999999999999998766665 7788888887777665420 0
Q ss_pred --------------------------------------ChhHHHHHHHHHHHHhhhccc----cccccccccC-CCchhH
Q psy11734 302 --------------------------------------NTSMVAIFFTIGMAFMGFCYA----SIRVNPIDLS-PNFSGT 338 (817)
Q Consensus 302 --------------------------------------~~~~~~~~~~l~~~~~g~~~~----~~~~~~~~~~-p~~~g~ 338 (817)
.......++.++-...|.+.+ .-.+++.|.. +++.+.
T Consensus 98 ~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~spl 177 (539)
T PF03137_consen 98 EEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPL 177 (539)
T ss_dssp ------------------------------------------------------SSS-----------------------
T ss_pred ccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCcc
Confidence 001122333334344444333 3366777744 478888
Q ss_pred HHHHHHhhhhhcccccccccceecccccccCCC-----CCCCCCccchhhcccCccccccccccccccccccCCccchhH
Q psy11734 339 IMALSNGLGCVSGMVAPLTVGFLTQNIISINPI-----DLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWR 413 (817)
Q Consensus 339 a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (817)
-.|+.+.+..+|.++|=.+++...+...++... .+.|+..- ...+|=
T Consensus 178 YiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~----------------------------WvGAWW 229 (539)
T PF03137_consen 178 YIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPR----------------------------WVGAWW 229 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred chhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCcc----------------------------HHHHHH
Confidence 889999999999988888888877654332211 11111110 122455
Q ss_pred HHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCC
Q psy11734 414 VVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTES 493 (817)
Q Consensus 414 ~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (817)
.-|++.+.+.++..+..++++|+-++..+.+..+ +.
T Consensus 230 LGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~----------------------------------~~---------- 265 (539)
T PF03137_consen 230 LGFLICGILLFLSAIPLFFFPKKLPGTSERQEEK----------------------------------ES---------- 265 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHcCCccCCCcccccchh----------------------------------hh----------
Confidence 5667777777777888888887765541111000 00
Q ss_pred CCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhh
Q psy11734 494 CFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAH 573 (817)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~ 573 (817)
++...+ +...++..++...++.. ..+ .
T Consensus 266 ~~~~~~-~~~~~~~~~~~~~~~~~--------------------------------------------------~~~-~- 292 (539)
T PF03137_consen 266 SERKEE-DSDKDSFKDPKSKKSFG--------------------------------------------------KSI-K- 292 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcchh-hhhhhcccccccccchh--------------------------------------------------hhh-h-
Confidence 000000 00000000000000000 000 0
Q ss_pred cchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHH-HH
Q psy11734 574 SGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFL-IM 652 (817)
Q Consensus 574 ~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~-~~ 652 (817)
+ .....+++++||.+....++..+......++.+++|.|++.+++.++.+++.+.....+ ++
T Consensus 293 -d----------------f~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~ 355 (539)
T PF03137_consen 293 -D----------------FPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGA 355 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -h----------------HHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchh
Confidence 1 12346789999999999999999999999999999999999999999999988876664 78
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-----------cC--------------------
Q psy11734 653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-----------GC-------------------- 701 (817)
Q Consensus 653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-----------~~-------------------- 701 (817)
++|.+++|++.+|++-+. ++.-++..+...+........+... +.
T Consensus 356 ~~G~llGG~ivkk~kl~~----~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~ 431 (539)
T PF03137_consen 356 ALGILLGGYIVKKFKLSA----RGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCC 431 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred heehheEEEEEEEecCcH----HHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCcc
Confidence 899999999999987442 1222333322222221101111110 00
Q ss_pred --------------c-h---HHHHHHHHHHHHHHhhhhhhhh-hhccccCCCchHHHHHHHHHHHHH-HHhHHHHHHHHh
Q psy11734 702 --------------N-T---SMVAICFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCV-SGMVAPLTVGFL 761 (817)
Q Consensus 702 --------------~-~---~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~-g~~i~p~~~g~~ 761 (817)
+ . ....+.+++..+..+....+.. .....+.+++|+.+.|+...+..+ |.+-+|.+.|.+
T Consensus 432 ~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~i 511 (539)
T PF03137_consen 432 SSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAI 511 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhHH
Confidence 0 0 1111122222222233333333 333335558999999999877665 889999999999
Q ss_pred hcCC
Q psy11734 762 TQNK 765 (817)
Q Consensus 762 ~~~~ 765 (817)
.|..
T Consensus 512 iD~t 515 (539)
T PF03137_consen 512 IDST 515 (539)
T ss_dssp ----
T ss_pred Hhhh
Confidence 9984
No 238
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.82 E-value=7.4e-08 Score=101.09 Aligned_cols=147 Identities=17% Similarity=0.139 Sum_probs=119.6
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--- 591 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--- 591 (817)
++|.++.|++.+...-+....+..++.|.++||+|||+..+...++.+++++. -..+ +++.|+++|++.|++.+
T Consensus 63 ~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~-k~~~--~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 63 SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLT-KHSS--NYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHH-Hhcc--ccHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999999999999999998864 4446 89999999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 140 S~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~EN 219 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPEN 219 (354)
T ss_pred HHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccccc
Confidence
Q ss_pred --c---Cc--------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q psy11734 592 --L---ET--------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMS 658 (817)
Q Consensus 592 --~---~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 658 (817)
. .. .++.+.+||+++.+.....++-...|.+....++-++. +-+...-|.+++.+....++|+.+
T Consensus 220 yg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~--~~~~~P~GlIFssFM~a~MlGS~l 297 (354)
T PF05631_consen 220 YGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDP--DDEELPLGLIFSSFMVAMMLGSSL 297 (354)
T ss_pred CCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecC--CCCCCCchHHHHHHHHHHHHHHHH
Confidence 0 11 12346678999999999999999988887544444442 112334789999999999999988
Q ss_pred HHHHHhhh
Q psy11734 659 SSALADYL 666 (817)
Q Consensus 659 ~g~l~dr~ 666 (817)
..++..|.
T Consensus 298 f~~l~s~~ 305 (354)
T PF05631_consen 298 FSRLLSKS 305 (354)
T ss_pred HHHHHhCC
Confidence 87666544
No 239
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.78 E-value=4.3e-08 Score=91.04 Aligned_cols=131 Identities=16% Similarity=0.156 Sum_probs=99.4
Q ss_pred HHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhh
Q psy11734 647 LPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRV 726 (817)
Q Consensus 647 ~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 726 (817)
...++..++.+..|++.||+|||+.+ ..+.....++.+.....+ +.+.......+.+...+...+....
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~~~~----------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~ 74 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRKPVL----------LVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALVAGAA 74 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchhHHH----------HHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 45678889999999999999987653 355555555555554443 5555555566666666666777777
Q ss_pred hccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 727 NPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 727 ~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
...|..| ++|+++.++.+....++..++|.+.+.+.+..+ |+..+++.+...+++.+...+.
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 137 (141)
T TIGR00880 75 LIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLG---WRAPFLFLAILALAAFILLAFL 137 (141)
T ss_pred HHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccc---hHHHHHHHHHHHHHHHHHHhhc
Confidence 8888887 779999999999999999999999999988754 8888888887777776666554
No 240
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.66 E-value=3.7e-07 Score=102.35 Aligned_cols=131 Identities=21% Similarity=0.299 Sum_probs=83.9
Q ss_pred hhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHh---hcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC-
Q psy11734 226 LPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFI---ARDILSRTNVRKVFATLGAVLPGVGALAASYVGC- 301 (817)
Q Consensus 226 ~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g---~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 301 (817)
...|+++.+|.++.+...+.....+... ..++.|.++|-+- .|| |..+.++.++..++...+...+.
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~-~Kp~~g~lsD~~pi~G~rr--------~~Y~~i~~~~~~~~~~~~~~~~~~ 82 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWS-IKPLYGLLSDSFPIFGYRR--------KPYMIIGWLLGAVSALVLALLPAS 82 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchH-HhhhHHhhcccccccCCcc--------hHHHHHHHHHHHHHHHHHHhcccc
Confidence 3446778899999987776666665444 4788999999973 232 33456666666555555544433
Q ss_pred --ChhHHHHHHHHHHHHhhhcccccccccccc---CCCchhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 302 --NTSMVAIFFTIGMAFMGFCYASIRVNPIDL---SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 302 --~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~---~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
+.......+.+...+....-....+...|. .|+.+|.-.+.....+.+|+.++..+.|.+.++.
T Consensus 83 ~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~ 151 (433)
T PF03092_consen 83 ESSAAIAVVLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSF 151 (433)
T ss_pred cchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcC
Confidence 333344444444444444444444444443 3445888888999999999999999999887764
No 241
>KOG2816|consensus
Probab=98.65 E-value=6e-06 Score=92.16 Aligned_cols=247 Identities=17% Similarity=0.150 Sum_probs=176.6
Q ss_pred HHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccc
Q psy11734 249 FLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNP 328 (817)
Q Consensus 249 ~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~ 328 (817)
++..++.++.-|.++||+|||.. +........+....+.+.. ++..+... ..++.........+++
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~----------L~~~~~~~~l~~~~~~~~~---~~~~~~~~-l~g~~~~~~s~~~a~v 137 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVV----------LLLPLFGTILPALCLLFQG---YWFFLLLG-LSGGFSAIFSVGFAYV 137 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhh----------HHHHHHHHHHhHHHHHHHH---HHHhhhcc-cccchhhhhhhhhhhe
Confidence 67888999999999999999975 4444444333333333322 22222111 1233334455557777
Q ss_pred cccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCC
Q psy11734 329 IDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 407 (817)
Q Consensus 329 ~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (817)
.|... ++|....|+.+..-..+..++|.+.+.+....
T Consensus 138 adis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~------------------------------------------ 175 (463)
T KOG2816|consen 138 ADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVKFL------------------------------------------ 175 (463)
T ss_pred eeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhc------------------------------------------
Confidence 88666 79999999999999999999999988877653
Q ss_pred ccchhHHHHHHHHHHHHHhhhhheeecccccccccCC-------------------------CCchhHHHHHHHHHHHHH
Q psy11734 408 TLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNES-------------------------ILPARYVLGIMGCMGVTL 462 (817)
Q Consensus 408 ~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~il~~~~~~~~~ 462 (817)
++-.+|.+.+...+.+.+...++-|+..++.+++ +.+.+...+.++....+.
T Consensus 176 ---~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~l~l~~~~~ 252 (463)
T KOG2816|consen 176 ---GIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSSHVADAFQSLTKVGPDRLLLLLLLVAFLS 252 (463)
T ss_pred ---CchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccchhhhhhhhhhcccCCCccchHHHHHHHHH
Confidence 5778899998888888877666665543222211 112333444555555555
Q ss_pred HHhhhhhcc-EEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhc
Q psy11734 463 ALMMRSCLA-TAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPG 541 (817)
Q Consensus 463 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~ 541 (817)
...+..... ...-++.. .+++++.+.+...+.......+++.+.
T Consensus 253 ~~~~~~~~~~~~~~yl~~-----------------------------------~f~w~~~~~s~~~~~~~~~~~i~~l~~ 297 (463)
T KOG2816|consen 253 SLPEAGGASDVLLLYLKA-----------------------------------KFGWNKKEFSDLLSLVSILGIISQLLL 297 (463)
T ss_pred HHHHhcCceeEEEEEEee-----------------------------------ecCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 555554444 33223344 899999999999888888888888888
Q ss_pred h-hhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 542 G-ILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 542 G-~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
. .+...+|-|+++..|+..-.+.....++++ +.|+++...++.++...
T Consensus 298 ~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~--~~w~~~~~~v~~~~~~~ 346 (463)
T KOG2816|consen 298 LPLLSSILGEKRLISLGLLSEFLQLLLFAFAT--ETWMMFAAGVVVALAGI 346 (463)
T ss_pred HHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhc--cchhhhHHHHHHHhhcc
Confidence 7 788899999999999999999999999999 99999999999888766
No 242
>KOG2325|consensus
Probab=98.62 E-value=6.8e-07 Score=98.34 Aligned_cols=114 Identities=23% Similarity=0.193 Sum_probs=92.8
Q ss_pred CCCchhHHHHHHHHHHHHHHHhhhhhccEEE-EeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhh
Q psy11734 444 SILPARYVLGIMGCMGVTLALMMRSCLATAI-TEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERT 522 (817)
Q Consensus 444 ~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 522 (817)
+.++.+|+.++++.+..++.....+.+.+.. |++.+ -|.+-+.+.
T Consensus 27 ~~~~t~wrsi~l~~~~sfl~~v~~sI~~~s~wpYl~~----------------------------------lD~~A~~~f 72 (488)
T KOG2325|consen 27 DERKTNWRSIYLALLNSFLVAVQFSIYLTSMWPYLQK----------------------------------LDPTATATF 72 (488)
T ss_pred cccCCchHhHHHHHHHHHHHhhhheEEEeecchhhhh----------------------------------cCCCCCcch
Confidence 4467789998888888888877776655433 33322 156778888
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCc-hHHHHHHHHHHHHHHHHH-HHhh--hcchHHHHHHHHHHhhhcc
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGG-KHTLGLGFLSTAIFTLLT-PLIA--HSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Gr-r~~l~~~l~~~~i~~~l~-~~a~--~~s~~~l~~~R~l~Gig~~ 591 (817)
.|++.++..++.+++++.+|....|.+. |+.++.+.++..++.++. +++. +.+.+.++++|++.|+|.+
T Consensus 73 fG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~ 145 (488)
T KOG2325|consen 73 FGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG 145 (488)
T ss_pred hhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc
Confidence 9999999999999999999999999997 889999999999999999 4442 3367889999999999988
No 243
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.62 E-value=6.2e-08 Score=89.91 Aligned_cols=137 Identities=17% Similarity=0.159 Sum_probs=100.2
Q ss_pred hhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccc
Q psy11734 243 VLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYA 322 (817)
Q Consensus 243 ~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~ 322 (817)
+......++..++++..|++.||++||+. ...+.....++.......+ +.+.......+.+...+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~----------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~ 70 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPV----------LLVGLFIFVLSTAMFALSS-NITVLIIARFLQGFGAAFALV 70 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHH----------HHHHHHHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHH
Confidence 34556788899999999999999999885 5556555555555554443 444444455555555555566
Q ss_pred cccccccccCC-CchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccccccc
Q psy11734 323 SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVG 401 (817)
Q Consensus 323 ~~~~~~~~~~p-~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (817)
.......|..| ++|+++.++.+....+|..++|.+.+.+.+..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~------------------------------------ 114 (141)
T TIGR00880 71 AGAALIADIYPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFL------------------------------------ 114 (141)
T ss_pred hHHHHHHHHCChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhccc------------------------------------
Confidence 66666777665 78999999999999999999999988876543
Q ss_pred ccccCCccchhHHHHHHHHHHHHHhhhhheeecc
Q psy11734 402 FLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 402 ~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
+|+..|++.+.+.+++.+...++.+
T Consensus 115 ---------~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (141)
T TIGR00880 115 ---------GWRAPFLFLAILALAAFILLAFLLP 139 (141)
T ss_pred ---------chHHHHHHHHHHHHHHHHHHhhcCC
Confidence 5888899888887777666555443
No 244
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=98.56 E-value=8e-05 Score=82.18 Aligned_cols=393 Identities=11% Similarity=0.040 Sum_probs=212.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHH
Q psy11734 204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFAT 283 (817)
Q Consensus 204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~ 283 (817)
..+.+.++.++..+.-=..-+-.|.++.+.+.-+-.-.+.+.....+..++.++.-|.+.||..|.+.. ..-.+.-.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~---~~~l~~Qn 79 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVI---RTSLVVQN 79 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhH---HHHHHHHH
Confidence 345677788888888888888899999998776766677777788888999999999999998877642 11111112
Q ss_pred HHhHHHHHHHHhhhccCCC----hhHHHHHHH--HHHHH--hhhcccccccc-------ccccCCCchhHHHHHHHhhhh
Q psy11734 284 LGAVLPGVGALAASYVGCN----TSMVAIFFT--IGMAF--MGFCYASIRVN-------PIDLSPNFSGTIMALSNGLGC 348 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~--l~~~~--~g~~~~~~~~~-------~~~~~p~~~g~a~g~~~~~~~ 348 (817)
.+..++...++.+...... .......+. +..+. .........+. ..+-.++.....++.+.-.-+
T Consensus 80 ~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL 159 (432)
T PF06963_consen 80 LSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDL 159 (432)
T ss_pred HHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHH
Confidence 2333333333322222211 111111111 11111 11112211111 122234566677777777777
Q ss_pred hcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhh
Q psy11734 349 VSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNV 428 (817)
Q Consensus 349 lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~ 428 (817)
+...++|.+.|.+.+.. +......+.++..+++.+
T Consensus 160 ~ckllaPl~vG~l~t~~---------------------------------------------s~~~~~~~i~~~N~~S~~ 194 (432)
T PF06963_consen 160 FCKLLAPLFVGLLMTFA---------------------------------------------SPVIAAIFIAGWNLASVF 194 (432)
T ss_pred HHHHHHHHHHHHHhhcc---------------------------------------------CHHHHHHHHHHHHHHHHH
Confidence 79999999999888764 466677777777777776
Q ss_pred hheeecccccccccCCCCchhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecc
Q psy11734 429 FFVLFGSGEVQYWNESILPARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKT 508 (817)
Q Consensus 429 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (817)
+-+++-++-.+.. |++.+..+..+.++.++.+
T Consensus 195 vEy~~l~~VY~~~---------------------------------P~L~~~~~~~~~~~~~~~~--------------- 226 (432)
T PF06963_consen 195 VEYFLLARVYNSV---------------------------------PALAVKKRSSESESSSDEE--------------- 226 (432)
T ss_pred HHHHHHHHHHHhC---------------------------------hHhcCCCCCcccccccccc---------------
Confidence 6444433322111 1111100000000000000
Q ss_pred cccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhh
Q psy11734 509 YTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGV 588 (817)
Q Consensus 509 ~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gi 588 (817)
+..-+..+.... ..+-..+.+
T Consensus 227 ------~~~~~~~~~~~~-------------------------------------~~~~~~~~~---------------- 247 (432)
T PF06963_consen 227 ------SSSESSSDPSIL-------------------------------------KRLWNPLRT---------------- 247 (432)
T ss_pred ------ccccccchhhHH-------------------------------------HHHHHHHHH----------------
Confidence 000000000000 000000111
Q ss_pred hcccCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734 589 GEDLETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV 668 (817)
Q Consensus 589 g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~ 668 (817)
...+++..+++|.+... ++..+.+...-++...+..|+... |+++...|.+=+...+.++.|++...++.+|+|.
T Consensus 248 ---~~~~w~~Y~~q~vflas-~alalLY~TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGl 322 (432)
T PF06963_consen 248 ---IIRGWRTYFRQPVFLAS-FALALLYFTVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGL 322 (432)
T ss_pred ---HhccHHHHHhCHHHHHH-HHHHHHHHHHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 12346667777755444 444444444555677788999985 9999999999999999999999999999999997
Q ss_pred ccccccchhhHHHHHHHHHHHHHHHHHHHhhcCch--HH----HHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHH
Q psy11734 669 RDILSRTNVRKVFATLGAVLPGVGALAASYVGCNT--SM----VAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMA 741 (817)
Q Consensus 669 ~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g 741 (817)
.+.- .+....-..+..++...+ +.+.++ .. .+....+.-.+.-..--......+|..| ++||+..|
T Consensus 323 vr~G------~~~l~~q~~~L~~~v~~~-~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~g 395 (432)
T PF06963_consen 323 VRAG------LWSLWWQWVCLALCVVSF-WAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSG 395 (432)
T ss_pred hhhH------HHHHHHHHHHHHHHHHHH-hcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHH
Confidence 6542 222222222222222222 333222 11 2222222222222222333355566555 88999999
Q ss_pred HHHHHHHHHHhHHHHHHHHhhcC
Q psy11734 742 LSNGLGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 742 ~~~~~~~~g~~i~p~~~g~~~~~ 764 (817)
+.+..+++...+.-.+ +.+...
T Consensus 396 vq~sl~~lf~ll~~~~-~ii~~~ 417 (432)
T PF06963_consen 396 VQNSLQSLFELLSFVL-TIIFPR 417 (432)
T ss_pred HHHHHHHHHHHHHHHH-HhccCC
Confidence 9999999987776544 344444
No 245
>KOG2816|consensus
Probab=98.42 E-value=6.7e-07 Score=99.74 Aligned_cols=263 Identities=17% Similarity=0.155 Sum_probs=180.1
Q ss_pred ccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCC
Q psy11734 10 GTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKS 89 (817)
Q Consensus 10 g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~ 89 (817)
+.++....++++|....++|.+..|+.......+..++|.+++.+.. ..|--.+|++.....++..+...+++||+-.+
T Consensus 127 ~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~~~~~-~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~ 205 (463)
T KOG2816|consen 127 SAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGGYLVK-FLGIALVFLIAAASGILSLLYMLLFLPESLQE 205 (463)
T ss_pred hhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-hcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence 44678889999999999999999999999999999999999999999 89999999999998888888888888775322
Q ss_pred CCCCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhh
Q psy11734 90 HPYISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTP 169 (817)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (817)
+...+ .... ....+....|..
T Consensus 206 ~~~~~-----~~~~-----~~~~~~~~~~~~------------------------------------------------- 226 (463)
T KOG2816|consen 206 KERSD-----ATLR-----ELTPGSLDSSHV------------------------------------------------- 226 (463)
T ss_pred ccccc-----cccc-----ccCCCcccchhh-------------------------------------------------
Confidence 21110 0000 000011001100
Q ss_pred cccCcCCchhhhHHhhhccCcccCchHH---HHhhchhHHHHHHHHHHHHHHHH-HHhhchhhHHHHhhCCcccccchhh
Q psy11734 170 LVAHSGPVSMTVLRFLEGVGEDLKTPWA---AILYSLPVWSLIISEVGHDYGLY-LISTDLPKYMSEVIGLSVAENGVLS 245 (817)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~~~~~~~~i~~~~~~~~~~-~~~~~~p~~l~~~~g~s~~~ag~~~ 245 (817)
.++++ ..=.+|..+......+.....-. +..-..+.|+...++++..+.+.+.
T Consensus 227 -----------------------~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~ 283 (463)
T KOG2816|consen 227 -----------------------ADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLL 283 (463)
T ss_pred -----------------------hhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHH
Confidence 01111 11123334443333333333332 2332457788888999999999989
Q ss_pred hhhHHHHHHHHhhhH-HHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc
Q psy11734 246 ALPFLIMWLVSMSSS-ALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI 324 (817)
Q Consensus 246 ~~~~i~~~ig~~~~G-~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~ 324 (817)
+..+....+++.+.. .+..+++.++. +..|+..-.+......+... .+..+....... +.....+..
T Consensus 284 ~~~~~~~~i~~l~~~~~l~~~l~~~~~----------i~lGl~~~~~~~~~~af~~~-~w~~~~~~v~~~-~~~~~~pa~ 351 (463)
T KOG2816|consen 284 SLVSILGIISQLLLLPLLSSILGEKRL----------ISLGLLSEFLQLLLFAFATE-TWMMFAAGVVVA-LAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhH----------hhHHHHHHHHHHHHHHHhcc-chhhhHHHHHHH-hhcchhHHH
Confidence 989999999998887 66677787775 88888888887777777653 333333333222 333444555
Q ss_pred cccc-cccCCCchhHHHHHHHhhhhhcccccccccceecccccc
Q psy11734 325 RVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIIS 367 (817)
Q Consensus 325 ~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~ 367 (817)
.+.. ....++++|++.++...++.+.+.++|.+.+.+...+..
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~~~t~~ 395 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIFALTLD 395 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHHHHHHH
Confidence 4444 446679999999999999999999999999988776643
No 246
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.29 E-value=1.5e-05 Score=81.19 Aligned_cols=140 Identities=16% Similarity=0.086 Sum_probs=96.3
Q ss_pred HHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHH
Q psy11734 613 VGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVG 692 (817)
Q Consensus 613 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~ 692 (817)
.......|.+..|.|. +++.+|+|+++...+.....++..+| ++.|.+.||+|.+.+ +.++.+...++
T Consensus 12 ~~~~Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~----------l~iG~~~~~~G 79 (250)
T PF06813_consen 12 QLCSGTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVV----------LLIGAVLGFVG 79 (250)
T ss_pred HHhcCcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHH----------HHHHHHHHHHH
Confidence 3444567777878876 66779999999999998888998875 888999999997643 34777776676
Q ss_pred HHHHHhhcC-----ch-HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734 693 ALAASYVGC-----NT-SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 693 ~~~~~~~~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~ 764 (817)
...+..... .+ |.......+.+......+........+.+|++||++.|+.-....+++.+-..+...+.+.
T Consensus 80 Y~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f~~ 157 (250)
T PF06813_consen 80 YGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFFGD 157 (250)
T ss_pred HHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHcCC
Confidence 666554321 12 3333333333333223333333445577899999999999999999887777776666655
No 247
>KOG2325|consensus
Probab=98.29 E-value=1.6e-06 Score=95.55 Aligned_cols=88 Identities=13% Similarity=0.144 Sum_probs=69.0
Q ss_pred CcccccCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcc-cccCcc-----------hhHHHH
Q psy11734 1 MVEMSNFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMS-FTASWA-----------NVFYIF 68 (817)
Q Consensus 1 ~R~l~G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~-~~~gWr-----------~~f~i~ 68 (817)
.|++.|+|.| ......+++++.-..++|.|+++..+.+..+|.++||.++..+.. +..||. .+=|++
T Consensus 136 ~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m 214 (488)
T KOG2325|consen 136 ARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLM 214 (488)
T ss_pred HHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHH
Confidence 3899999988 677788899998889999999999999999999999988877765 222332 244677
Q ss_pred hhhHHHHHhhhhheeccCCCC
Q psy11734 69 GAIAVLWFAFWCILCFNDPKS 89 (817)
Q Consensus 69 ~~~~~i~~~~~~~~~~~~p~~ 89 (817)
.++.++..++.+++++|.+++
T Consensus 215 ~i~~i~~~v~i~~~f~E~~~~ 235 (488)
T KOG2325|consen 215 AILWIIYIVIILFFFKEVYRG 235 (488)
T ss_pred HHHHHHHHHHHHhheeecccC
Confidence 777777777778888776543
No 248
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.19 E-value=3.4e-06 Score=94.58 Aligned_cols=298 Identities=14% Similarity=0.095 Sum_probs=161.5
Q ss_pred chhhhhhhhccC--CCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734 14 PALCTLLAQWSP--PNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAFWCILCFNDPKSHP 91 (817)
Q Consensus 14 ~~~~~~i~~~~p--~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~~~~~~~~~p~~~~ 91 (817)
..+=+.+.|.-. +++||..++.......+|.+++..++|.+.+ ..++|+.|.+.+++..+..+..+++.+|+++.++
T Consensus 105 V~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~-~~~~~~~f~i~~~~~~l~~~~~~~~~~e~~~~~~ 183 (433)
T PF03092_consen 105 VAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLD-SFGPQGVFLISAALPLLMLIVALFLLEERKVRPA 183 (433)
T ss_pred HhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhh-cCCCeEEehHHHHHHHHHHHHHHHhhhhcccccc
Confidence 334445555542 3448899999999999999999999999999 9999999999988888777666666554221111
Q ss_pred CCCHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcc
Q psy11734 92 YISEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLV 171 (817)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (817)
. +.....++... ...+
T Consensus 184 ~----~~~~~~~~~~~------~~~~------------------------------------------------------ 199 (433)
T PF03092_consen 184 D----EVFSFGKEEVP------CLFG------------------------------------------------------ 199 (433)
T ss_pred c----hhhcccccccc------hhhH------------------------------------------------------
Confidence 1 00000000000 0000
Q ss_pred cCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHH-HHHHHHHHHHHhhchhhHHHHhhC---Ccccccchhhhh
Q psy11734 172 AHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIIS-EVGHDYGLYLISTDLPKYMSEVIG---LSVAENGVLSAL 247 (817)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~-~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~ag~~~~~ 247 (817)
.-++.....++.+++|.+|...+. .++............-.+..+..+ +|+...+.+...
T Consensus 200 ----------------~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~~~~~~v 263 (433)
T PF03092_consen 200 ----------------SFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFYGTLSIV 263 (433)
T ss_pred ----------------HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHHHHHHHH
Confidence 000012235678888888876662 222111111100000011223345 777777777766
Q ss_pred hHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhcc---------CCChhHHHHHHHHHHHHhh
Q psy11734 248 PFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYV---------GCNTSMVAIFFTIGMAFMG 318 (817)
Q Consensus 248 ~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~g 318 (817)
..++.++|..+..+...+..- |+++.....+.....+.-+... ++. +.....-.+.....+
T Consensus 264 g~~~~l~g~~~y~~~~~~~~~---------R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~-~f~lgd~~l~~~~~~ 333 (433)
T PF03092_consen 264 GSIASLLGILLYRKYFSNWSW---------RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQ-WFALGDTILEEVIGM 333 (433)
T ss_pred HHHHHHHHHHHHHHHHhCCCH---------HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCe-EEEEEhHHHHHHHHH
Confidence 666666666665554333322 3333333333222222211111 111 222222222223333
Q ss_pred hc-cccccccccccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCcccccccccc
Q psy11734 319 FC-YASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAP 397 (817)
Q Consensus 319 ~~-~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (817)
.. .|.......-.++..-|+.+++..++.++|..++..+...+.+..+ .+
T Consensus 334 i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~-vt---------------------------- 384 (433)
T PF03092_consen 334 IAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFG-VT---------------------------- 384 (433)
T ss_pred HHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CC----------------------------
Confidence 33 3333334444555799999999999999999999999888877764 10
Q ss_pred ccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccc
Q psy11734 398 LTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQ 439 (817)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~ 439 (817)
+.+-++.....++..++.++.+++..++.++++.
T Consensus 385 --------~~~f~~l~~lili~~~~~ll~l~ll~lLp~~~~~ 418 (433)
T PF03092_consen 385 --------RDDFSNLWLLILICSVIQLLPLPLLFLLPPQKRI 418 (433)
T ss_pred --------cccccchHHHHHHHHHHHHHHHHHHHHcCCCchh
Confidence 0001245556667777777777777677665543
No 249
>KOG3098|consensus
Probab=98.14 E-value=0.00037 Score=76.90 Aligned_cols=224 Identities=15% Similarity=0.025 Sum_probs=151.9
Q ss_pred HHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---------------
Q psy11734 527 LSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--------------- 591 (817)
Q Consensus 527 ~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--------------- 591 (817)
.++-...+.+++++.+.+.|+.|+|+.++++...+....+..-+- |-+-+++...+.|+|.+
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~---N~y~~yfssallG~Gaallw~GqG~ylt~~st 132 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP---NSYYLYFSSALLGFGAALLWTGQGGYLTSNST 132 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc---chHHHHHHHHHhhhhHHheecccceehhhcCC
Confidence 677788889999999999999999999999999999888877665 67789999999999999
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 133 ~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~ 212 (461)
T KOG3098|consen 133 RETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPS 212 (461)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCc
Confidence
Q ss_pred -------cCc--hhH-------HhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHH--hCCCh-hHHHHHHHHHHHHH
Q psy11734 592 -------LET--PWA-------AILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQV--IGLSV-AENGVLSALPFLIM 652 (817)
Q Consensus 592 -------~~~--~~~-------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~--~g~s~-~~~~~~~~~~~~~~ 652 (817)
+.. +.+ +.+++|+...+....+.......-.....|+.+... ++.+. ...+......+++.
T Consensus 213 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~ 292 (461)
T KOG3098|consen 213 KDVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGE 292 (461)
T ss_pred cchhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHH
Confidence 011 222 344566666666655555444444555666665543 23332 33455566677888
Q ss_pred HHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh-cCc----------------hHHHHHHHHHHHH
Q psy11734 653 WLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV-GCN----------------TSMVAICFTIGMA 715 (817)
Q Consensus 653 ~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~ 715 (817)
.++....+.+++|+.+.. |+..+..+..+..+.+++.... +.+ .....++..+.+.
T Consensus 293 v~~g~~~~~l~~rir~fg-------~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~ 365 (461)
T KOG3098|consen 293 VIGGLDFSILSKRIRGFG-------RKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGF 365 (461)
T ss_pred HHHHHHHHHHhhhhhhcc-------cCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhh
Confidence 888888888888876543 3334445555544444443322 101 1233344444555
Q ss_pred HHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHH
Q psy11734 716 FMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGF 760 (817)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~ 760 (817)
.-.......+..+....|++|.++.++..+-+.+++.++-.....
T Consensus 366 ~D~~~~t~~~~ii~~~~~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 366 GDACFNTQRYVIIALLYPDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 555666667788888889999999999999888888777665543
No 250
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.11 E-value=0.00085 Score=72.90 Aligned_cols=362 Identities=10% Similarity=0.006 Sum_probs=203.5
Q ss_pred hchhhHHHHh-hCCcccccchhhhhhHH-HHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCC
Q psy11734 224 TDLPKYMSEV-IGLSVAENGVLSALPFL-IMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGC 301 (817)
Q Consensus 224 ~~~p~~l~~~-~g~s~~~ag~~~~~~~i-~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (817)
.++..|+.+. +|++.+|..--..|... ..++.-+....++|..+.|++ ++++.+...+...++.+..
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpv----------iil~~~~~i~t~~lll~~~- 92 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPV----------IILQALSYIITWLLLLFGT- 92 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHH----------HHHHHHHHHHHHHHHHHHC-
Confidence 4666677775 89999988766666543 455666678889999998885 5666655555555555554
Q ss_pred ChhHHHHHHHHHHHHhhhccccccccc-cccCCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccc
Q psy11734 302 NTSMVAIFFTIGMAFMGFCYASIRVNP-IDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGT 380 (817)
Q Consensus 302 ~~~~~~~~~~l~~~~~g~~~~~~~~~~-~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~ 380 (817)
+...+-+.-+..+..... -.....++ ..++|++--++++.......+|-.++..++..+....
T Consensus 93 sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~--------------- 156 (412)
T PF01770_consen 93 SVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFG--------------- 156 (412)
T ss_pred cHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 444444444433333322 22233444 3355677677777777776666666666555444321
Q ss_pred hhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeecccccccccCCCCchhHHHHHHHHHHH
Q psy11734 381 IMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSGEVQYWNESILPARYVLGIMGCMGV 460 (817)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~ 460 (817)
..++....++......++.+..+++++.+++..-.+..+..-.
T Consensus 157 ----------------------------~~sy~~L~~isl~~~~~a~~~~~fLP~~~~S~~f~r~~~~~~~--------- 199 (412)
T PF01770_consen 157 ----------------------------GVSYFQLNYISLASVSLALLIALFLPMPKRSLFFHRKPPAEQD--------- 199 (412)
T ss_pred ----------------------------CCCHHHHHHHHHHHHHHHHHHHHHcCCCCcccceeccCccccc---------
Confidence 1268889999999899999999998876554321111100000
Q ss_pred HHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhh
Q psy11734 461 TLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIP 540 (817)
Q Consensus 461 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~ 540 (817)
.+ +.. .+.++... ++. .++++.+. +.+ +.
T Consensus 200 -----------------~~-~~~---~~~~~~~~---~~~---~~~~~~~~---~~~-~~-------------------- 228 (412)
T PF01770_consen 200 -----------------AN-ESE---SDKMNESP---ESS---SSTEKSPS---TES-SS-------------------- 228 (412)
T ss_pred -----------------cc-ccc---cccccccc---ccc---cccccCcc---ccc-ch--------------------
Confidence 00 000 00000000 000 00000000 000 00
Q ss_pred chhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHHHHHHHHHHHHHH
Q psy11734 541 GGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSLIISEVGHDYGFY 620 (817)
Q Consensus 541 ~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 620 (817)
++. .+.-+ ...+++..++|+++.-.+=+.+...+++
T Consensus 229 ---------~~~-------------~l~~l----------------------~~~~~~~y~~~~ll~WSlWWa~atcgy~ 264 (412)
T PF01770_consen 229 ---------RKS-------------VLRLL----------------------WKDFKSCYSNPRLLLWSLWWAFATCGYY 264 (412)
T ss_pred ---------HHH-------------HHHHH----------------------HHHHHHHhcCchHHHHHHHHHHHHhHHH
Confidence 000 00000 1346777888887666666667777777
Q ss_pred HHHhhHHHHHHHH--hCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHh
Q psy11734 621 LISSDLPKYMSQV--IGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASY 698 (817)
Q Consensus 621 ~~~~~~p~~l~~~--~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 698 (817)
-+..+.....++. .+-+..-.|..-+...+.+.++.+..|++..++.+- ....+....++.+.+++++.+
T Consensus 265 qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~--------~~l~l~~~S~l~a~~L~lm~~ 336 (412)
T PF01770_consen 265 QVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRW--------GELALGVFSLLQAGLLFLMSF 336 (412)
T ss_pred HHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777664 122333456677778888888999999985555442 223334444455555555655
Q ss_pred hcCchHHHHHHHHHHHHHHhhhhhhhh-hhccccCCCchHHHHHHHHHHHHHHHhH
Q psy11734 699 VGCNTSMVAICFTIGMAFMGFCYASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMV 753 (817)
Q Consensus 699 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~i 753 (817)
.. +.|......++......+..+... .++.....+.-|...|+++++..+-..+
T Consensus 337 t~-~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al~LQti 391 (412)
T PF01770_consen 337 TG-NIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVALVLQTI 391 (412)
T ss_pred hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHHHHHHh
Confidence 54 677777777777666665554444 3334444577888888877765554433
No 251
>KOG4332|consensus
Probab=98.05 E-value=6.4e-05 Score=74.56 Aligned_cols=257 Identities=17% Similarity=0.066 Sum_probs=144.1
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc---
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED--- 591 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~--- 591 (817)
.++..+.|+|.+.-.-+-...+...+.|.++||-|||+..+.-.+.+.++ ++.-.++ .+-.|+++|++-|+..+
T Consensus 66 tYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLs-CiTKhSp--qYkVLmVGR~LGGiaTsLLF 142 (454)
T KOG4332|consen 66 TYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILS-CITKHSP--QYKVLMVGRVLGGIATSLLF 142 (454)
T ss_pred hcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHH-HHhhcCC--ceEEEeehhhhhhHHHHHHH
Confidence 67778888888777666667778888899999999999765544444332 2223344 67789999999999998
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 143 SaFEsWliaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W~E 222 (454)
T KOG4332|consen 143 SAFESWLIAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSWSE 222 (454)
T ss_pred HHHHHHHHHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhhhh
Confidence
Q ss_pred ---cCch-----------hHHhhcCHhHHHHHHHHHHHHHHHHHHH-hhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHH
Q psy11734 592 ---LETP-----------WAAILSSLPVWSLIISEVGHDYGFYLIS-SDLPKYMSQVIGLSVAENGVLSALPFLIMWLVS 656 (817)
Q Consensus 592 ---~~~~-----------~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~ 656 (817)
.... .+.+.+++++.++.-....+-...|.+. .|-|..--+..+ .--|.+++-+.++.++|+
T Consensus 223 Nygdps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASmLGS 299 (454)
T KOG4332|consen 223 NYGDPSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASMLGS 299 (454)
T ss_pred ccCChhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHHHhh
Confidence 0000 1123445555544444444444444443 445542111111 224678888888888888
Q ss_pred HHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh----c--CchHHHHHHHHHHHHHHhhhhhhhhhhccc
Q psy11734 657 MSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV----G--CNTSMVAICFTIGMAFMGFCYASIRVNPID 730 (817)
Q Consensus 657 ~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (817)
-+..++..|-..|.- ..+.+.+.+..+.+.+.... + .++....+.+.+.-.+.+...|.+.-.-.+
T Consensus 300 Sla~Rl~s~s~~~ve--------~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsq 371 (454)
T KOG4332|consen 300 SLASRLLSRSSPKVE--------SYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQ 371 (454)
T ss_pred HHHHHHHhcCCcccc--------hHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHh
Confidence 888777766543311 11223444444433333322 1 123445666666667777777777777777
Q ss_pred cCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHH
Q psy11734 731 LSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFF 788 (817)
Q Consensus 731 ~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~ 788 (817)
.-| +.|++.+-..-.=-++-..++-+. .=.|... ..-+..|-++.+...++.+..
T Consensus 372 yIPEearstimNfFRvPLnifvClvLyn--lh~~~~p-~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 372 YIPEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFP-TTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred hCCHHHHhhhhhheechhhHhhhhhhee--cccccCc-cccchhhhhhHHHHHHHHHHH
Confidence 777 668776544332222222222111 0011111 112456666666666654443
No 252
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.98 E-value=0.00053 Score=72.49 Aligned_cols=251 Identities=13% Similarity=0.044 Sum_probs=136.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHH
Q psy11734 202 SLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVF 281 (817)
Q Consensus 202 ~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~ 281 (817)
++++...........+..-...+ ..| + .+|++..+.+.+.........+...+.|.++||+|||+.
T Consensus 36 qr~yl~vY~La~~aDWLQGpY~Y--~LY-~-~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~---------- 101 (354)
T PF05631_consen 36 QRKYLLVYLLAMAADWLQGPYLY--ALY-E-SYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKA---------- 101 (354)
T ss_pred HHHHHHHHHHHHHHHHhhcchhH--HHH-H-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHH----------
Confidence 34455555444444433322222 223 3 489999999999999999999999999999999999985
Q ss_pred HHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc--cccc----cccCCCchhHHHHHHHhhhh-hccccc
Q psy11734 282 ATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI--RVNP----IDLSPNFSGTIMALSNGLGC-VSGMVA 354 (817)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~--~~~~----~~~~p~~~g~a~g~~~~~~~-lg~~~~ 354 (817)
++...++..++++.-. .++....++.=.+++......++.. +... .+.+++..+...+...+..+ +-+..+
T Consensus 102 cl~~cily~~scl~k~--~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~a 179 (354)
T PF05631_consen 102 CLLFCILYSLSCLTKH--SSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGA 179 (354)
T ss_pred HHHHHHHHHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHH
Confidence 5555555555544322 2245555555455555444444433 2222 22333445555555443322 222333
Q ss_pred ccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeec
Q psy11734 355 PLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFG 434 (817)
Q Consensus 355 ~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~ 434 (817)
..++..+.|..+ .+-...|.....+.+++.++.....
T Consensus 180 Gv~a~~l~~~~~-------------------------------------------~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 180 GVVANVLADWFG-------------------------------------------FGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred hHHHHHHHHHhC-------------------------------------------CCCcchHHHHHHHHHHHHHHHHhcc
Confidence 333333333321 1335577777777777776655544
Q ss_pred ccccccccCC--C-C--c-------hhHHHHHHHHHHHHHHHhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCc
Q psy11734 435 SGEVQYWNES--I-L--P-------ARYVLGIMGCMGVTLALMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNH 502 (817)
Q Consensus 435 ~~~~~~~~~~--~-~--~-------~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 502 (817)
+|+.++.+++ . . + .+..++ .+.+...+-....+.+-....+..++.
T Consensus 217 ~ENyg~~~~~~~~~~~~~~a~~~i~~d~ril-~LG~~qslFE~smy~FVflWtPaL~~~--------------------- 274 (354)
T PF05631_consen 217 PENYGDTSSSSSLSGSFREAWRAILSDPRIL-LLGLIQSLFEGSMYLFVFLWTPALDPD--------------------- 274 (354)
T ss_pred cccCCCcccccchHHHHHHHHHHHHcCchhH-HHHHHHHHHHHHHHHheeeeeceecCC---------------------
Confidence 5544331111 1 0 0 112222 222333333334444444443332200
Q ss_pred eeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhcccc
Q psy11734 503 TVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKF 548 (817)
Q Consensus 503 ~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~ 548 (817)
+ .+.-.|++.+.|+.+..+|+-+..++..|-
T Consensus 275 ------------~---~~~P~GlIFssFM~a~MlGS~lf~~l~s~~ 305 (354)
T PF05631_consen 275 ------------D---EELPLGLIFSSFMVAMMLGSSLFSRLLSKS 305 (354)
T ss_pred ------------C---CCCCchHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 1 122379999999999999999998766543
No 253
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=97.92 E-value=4.5e-05 Score=77.73 Aligned_cols=137 Identities=18% Similarity=0.130 Sum_probs=93.2
Q ss_pred HHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHH
Q psy11734 214 GHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGA 293 (817)
Q Consensus 214 ~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~ 293 (817)
...+..|.+..|-|..-+ .+|+|..|...+.....++..+ ++..|.+.||.+++.. +.+|.+...++.
T Consensus 13 ~~~Gt~Y~Fs~yS~~Lk~-~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~----------l~iG~~~~~~GY 80 (250)
T PF06813_consen 13 LCSGTTYTFSAYSPQLKS-RLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVV----------LLIGAVLGFVGY 80 (250)
T ss_pred HhcCcccchhhhhHHHHH-HhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHH----------HHHHHHHHHHHH
Confidence 455677888888887665 5899999999999999998876 5889999999999875 677777777766
Q ss_pred HhhhccCC------ChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceec
Q psy11734 294 LAASYVGC------NTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 294 ~~~~~~~~------~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
..+...-. +.+.+.....+++.+.....+.........+|++||++.|+.-....+++++-.++...+.
T Consensus 81 ~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vvgilk~~~GLSaai~t~i~~~~f 155 (250)
T PF06813_consen 81 GLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVVGILKGFFGLSAAIFTQIYSAFF 155 (250)
T ss_pred HHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCceehhhhHHHHhHHHHHHHHHHHHc
Confidence 66544311 2223333333332222222222222233456889999999999999988887777655444
No 254
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.90 E-value=0.00023 Score=83.36 Aligned_cols=166 Identities=11% Similarity=0.072 Sum_probs=120.7
Q ss_pred HHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcccccccchhhHHHHHHHHHHHHHHHHHH
Q psy11734 618 GFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYL-IVRDILSRTNVRKVFATLGAVLPGVGALAA 696 (817)
Q Consensus 618 ~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~-g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~ 696 (817)
++|++...+..|+.+.+|++...+..++..+....-+...++|+++|++ |+++.+ ..+.++..++..++
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tI----------l~~~ii~~lG~~ll 71 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTI----------LYLSIVYVVGHALL 71 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHH----------HHHHHHHHHHHHHH
Confidence 5678888899999999999999999888888888899999999999995 544433 46666666666665
Q ss_pred HhhcCc----h---HHHHHHHHHHHHHHhhhhhhhhhhccccCC-C---chHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734 697 SYVGCN----T---SMVAICFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 697 ~~~~~~----~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
.....+ . ......+.+..++.+..-+...+...|.++ + .+-....+.....++|+.+++.+.+++.+..
T Consensus 72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 543211 1 123334444555555556666666666554 2 3778888889999999999999999987553
Q ss_pred c----cccHHHHHHHHHHHHHHHHHHHHHhcc
Q psy11734 766 T----LLEWRVVFWIMFLTLFISNVFFVLFGS 793 (817)
Q Consensus 766 g----~~~~~~~~~~~~~~~~i~~~~~~~~~~ 793 (817)
+ ..+|..+|.+.+++.+++.+.+...++
T Consensus 152 ~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 152 GCFGCQDCYPLAFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred cccccCcchHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1 124889999999999998888766543
No 255
>KOG0637|consensus
Probab=97.90 E-value=6e-05 Score=81.00 Aligned_cols=382 Identities=16% Similarity=0.118 Sum_probs=207.7
Q ss_pred hHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH----hhcCcccchhhHH
Q psy11734 204 PVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF----IARDILSRTNVRK 279 (817)
Q Consensus 204 ~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~----g~r~~~~~~~~~~ 279 (817)
+.+......+...+++..=..|.|+|+++ .|.+....+.+.....+.+.+.+++.|..+||. ||||.
T Consensus 33 ~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRP-------- 103 (498)
T KOG0637|consen 33 KLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRP-------- 103 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccc--------
Confidence 34445555555666677777899999998 599999999988888899999999999999984 55554
Q ss_pred HHHHHHhHHHHHHHHhhhccCC-------C-----hhHHHHHHHHHH----HHhhhccccccccccccCC-CchhH-HHH
Q psy11734 280 VFATLGAVLPGVGALAASYVGC-------N-----TSMVAIFFTIGM----AFMGFCYASIRVNPIDLSP-NFSGT-IMA 341 (817)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~~~~~~l~~----~~~g~~~~~~~~~~~~~~p-~~~g~-a~g 341 (817)
++..+.....+++.++.+..+ + ....+....++. +.........-+...|+.. .++.+ +++
T Consensus 104 -fI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans 182 (498)
T KOG0637|consen 104 -FILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANS 182 (498)
T ss_pred -hHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccch
Confidence 677777777777776655321 1 123333333333 3333334444556666554 34444 888
Q ss_pred HHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHH
Q psy11734 342 LSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFL 421 (817)
Q Consensus 342 ~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~ 421 (817)
...++..+|+.+|-...++.--+. .-.+.. .... +......+..|.....
T Consensus 183 ~f~~f~avGnvLGY~~g~y~~~~~--------~~~Ft~-----------------~~~~-----~~~C~~~~~~~~~~v~ 232 (498)
T KOG0637|consen 183 VFSFFMAVGNVLGYALGSYLGLYK--------IFPFTL-----------------TTAC-----DLYCANLKLCFFLEVT 232 (498)
T ss_pred hHHHHHHhcceeeeecccccCceE--------EeehHH-----------------HHHH-----HHHHHHHHHHHHHhhh
Confidence 888888888888777655221110 000000 0000 0001234444444444
Q ss_pred HHHHhhhhheeecccccccccC---------------------CCC-chhHHHHHH---HHHHH---HHHHhhhhhccEE
Q psy11734 422 ALVISNVFFVLFGSGEVQYWNE---------------------SIL-PARYVLGIM---GCMGV---TLALMMRSCLATA 473 (817)
Q Consensus 422 ~~~~~~~~~~~~~~~~~~~~~~---------------------~~~-~~~~~il~~---~~~~~---~~~~~~~~~~~~~ 473 (817)
+..+.-...+.-.++ ++...+ +.+ +..|.+.+. .++++ ++-+-|.+.=
T Consensus 233 L~~i~~~~~l~~~~~-~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~lltW~a~f~f~LF~TDfmG~--- 308 (498)
T KOG0637|consen 233 LLLIETSESLWYPQE-KPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTLLTWIAWFPFLLFDTDFMGR--- 308 (498)
T ss_pred hhheecccccccccc-cCCCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHHHHHHHHHHHHHHHHHhcch---
Confidence 433333222221111 111111 012 233333332 22222 2222222211
Q ss_pred EEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchhhccccCchHH
Q psy11734 474 ITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGILSQKFGGKHT 553 (817)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~ 553 (817)
++-+ ||.+..+. .+-...++-....-.|-..++.+..++.+....++.||+|.|+.
T Consensus 309 --~vy~--------------------GDp~a~~~--S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~ 364 (498)
T KOG0637|consen 309 --EVYG--------------------GDPKADEN--SEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKR 364 (498)
T ss_pred --HhhC--------------------CCCCCCcc--hhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceE
Confidence 1111 11111110 00001122122223455567777888999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccC--chhH-----HhhcCHhHHHHHHHHHHHHHHHHHHHhhH
Q psy11734 554 LGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLE--TPWA-----AILSSLPVWSLIISEVGHDYGFYLISSDL 626 (817)
Q Consensus 554 l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~--~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (817)
+..+...+.+++.+.++.+ +.+....-|-..|+-.+.. .++. ...+.|-.. -.+.
T Consensus 365 y~~~~~~f~~~~~~~gl~~--~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~----------------t~~~ 426 (498)
T KOG0637|consen 365 YWGGVNAFGLATGLAGLVL--NTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAI----------------TFSI 426 (498)
T ss_pred EeehhHHHHHHHHHHhhhh--hHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCcccc----------------cccc
Confidence 9999998999999999999 8888888888888544411 1110 111111100 1112
Q ss_pred HHHHHH----HhCCC-hhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734 627 PKYMSQ----VIGLS-VAENGVLSALPFLIMWLVSMSSSALADYLIVRDI 671 (817)
Q Consensus 627 p~~l~~----~~g~s-~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 671 (817)
|.-+.. ..|.. ....+.+.....+.+++.++..|.+.|.+|.-+.
T Consensus 427 pf~~~s~~~~~sg~g~G~~~gvln~~I~ipQvivs~~~Gp~~~~~G~~~~ 476 (498)
T KOG0637|consen 427 PFALASIEIGNSGLGQGLDLGVLNCAIVIPQVLVSLGLGPLDQLFGGGNL 476 (498)
T ss_pred ccccccccccCccCCCCceeeeeeeeeeehhheeeccccchhhhcCCcch
Confidence 222211 01111 1234555556667888888888999999998764
No 256
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.90 E-value=1.5e-05 Score=65.66 Aligned_cols=79 Identities=19% Similarity=0.142 Sum_probs=73.4
Q ss_pred HhhhhhccEEEEeeecccccccccCCCCCCCCCCCCCCceeeecccccccccccCChhhHHHHHHHHHHHHHHhhhhchh
Q psy11734 464 LMMRSCLATAITEMVRNVKTTKHDFVNTESCFPNANGNHTVVSKTYTTLDAKFDWDERTQGVILSAFYYGYILTHIPGGI 543 (817)
Q Consensus 464 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~i~~~~~G~ 543 (817)
...|..+.+.+|.|.+ |.++|.++.|++.+...+||.+|.+...+
T Consensus 5 GigRFayTplLP~M~~-----------------------------------~~~ls~~~ag~lasaNy~GYL~GAl~~~~ 49 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQA-----------------------------------DGGLSLSQAGWLASANYLGYLVGALLASR 49 (85)
T ss_pred hhHHHHHHhHhHHHHH-----------------------------------hcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889999999999 99999999999999999999999999999
Q ss_pred hccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHH
Q psy11734 544 LSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSM 579 (817)
Q Consensus 544 l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l 579 (817)
+.++..+++.+..+++...+.++.+++.+ +.+..
T Consensus 50 ~~~~~~~~~~~~~~l~~~~~~~~~ma~~~--~~~~w 83 (85)
T PF06779_consen 50 LPRHSRPRRLLRAGLLLTVLSTAAMALTH--SFWLW 83 (85)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHh--chHHH
Confidence 99999999999999999999999999998 76643
No 257
>KOG3762|consensus
Probab=97.65 E-value=0.00042 Score=76.05 Aligned_cols=157 Identities=20% Similarity=0.119 Sum_probs=121.2
Q ss_pred HHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhh
Q psy11734 198 AILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNV 277 (817)
Q Consensus 198 ~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~ 277 (817)
.++.++.....++...+.+.+.-.+.+++=-++++ ++-.+..-|......-.+-++.-++.+++.+|+|+-++
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v------ 438 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNV------ 438 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccce------
Confidence 56777877666666666555555555555444555 67777777877777778888889999999999999987
Q ss_pred HHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCC-CchhHHHHHHHhhhh-hcccccc
Q psy11734 278 RKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGC-VSGMVAP 355 (817)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~a~g~~~~~~~-lg~~~~~ 355 (817)
+.+++.+.+.=+++..+.. ++|..+.+-.+-+...+.......++++.+.| +.++++.++....-. +|-..|.
T Consensus 439 ----~~lgLa~~~~Rf~~~S~L~-n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 439 ----MYLGLACNVGRFLYYSYLQ-NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred ----eeehhhHHHHHHHHHHHhc-CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 7788887777777776665 77888888888888888888888888888665 789999999887755 7888999
Q ss_pred cccceeccccc
Q psy11734 356 LTVGFLTQNII 366 (817)
Q Consensus 356 ~i~g~l~~~~~ 366 (817)
.|+|.+.++++
T Consensus 514 lIGG~~v~~fg 524 (618)
T KOG3762|consen 514 LIGGFVVERFG 524 (618)
T ss_pred hhhhhhheeeh
Confidence 99998888763
No 258
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.58 E-value=0.00042 Score=56.70 Aligned_cols=65 Identities=29% Similarity=0.237 Sum_probs=58.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy11734 606 WSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI 671 (817)
Q Consensus 606 ~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~ 671 (817)
+.+-..++++..+...+..++|.|+++ .|+|+.++|.+.++..+...++.++.|+++||.++++.
T Consensus 3 ~~lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 3 LPLKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred hHHHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 345567788888999999999999998 79999999999999999999999999999999999864
No 259
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.43 E-value=0.0004 Score=56.84 Aligned_cols=63 Identities=32% Similarity=0.277 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI 271 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~ 271 (817)
.-..+++..++..++.-++|.|+++ .|+|+.++|.+.....+..+++.++.|.++||.++++.
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~ 67 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKV 67 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHH
Confidence 3445667777888888999999998 79999999999999999999999999999999999885
No 260
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.42 E-value=0.0006 Score=79.87 Aligned_cols=171 Identities=11% Similarity=0.065 Sum_probs=123.6
Q ss_pred HHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHH-HhhcCcccchhhHHHHHHHHhHHHHHHHHhh
Q psy11734 218 GLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADF-FIARDILSRTNVRKVFATLGAVLPGVGALAA 296 (817)
Q Consensus 218 ~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk-~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (817)
++|++...+..|+++..|++..++..+........-+...++|+++|+ +|+++. +..+.++..++..++
T Consensus 2 syYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~t----------Il~~~ii~~lG~~ll 71 (654)
T TIGR00926 2 SYYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKT----------ILYLSIVYVVGHALL 71 (654)
T ss_pred ceeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHH----------HHHHHHHHHHHHHHH
Confidence 467777888889888889999988888888888888899999999999 566664 666666666666665
Q ss_pred hccCCC-------hhHHHHHHHHHHHHhhhccccccccccccCC-C---chhHHHHHHHhhhhhcccccccccceecccc
Q psy11734 297 SYVGCN-------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSP-N---FSGTIMALSNGLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 297 ~~~~~~-------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p-~---~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~ 365 (817)
.....+ ....+..+.+..++.|..-+...+...|..+ + ++-+.+.+.....++|+.+++.+.+.+.++.
T Consensus 72 ai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~ 151 (654)
T TIGR00926 72 SFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDV 151 (654)
T ss_pred HhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 543211 1224455666667777777777777766443 2 4778889999999999999999888776543
Q ss_pred cccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchhHHHHHHHHHHHHHhhhhheeeccc
Q psy11734 366 ISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEWRVVFWIMFLALVISNVFFVLFGSG 436 (817)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~~~~~~~~~~ 436 (817)
+.++ ...+|...|.+.+++++++.+++....|.
T Consensus 152 ~~fg--------------------------------------~~~~~~~aF~i~~i~m~ia~lvf~~g~k~ 184 (654)
T TIGR00926 152 GCFG--------------------------------------CQDCYPLAFGVPAILMILALIVFMAGSKM 184 (654)
T ss_pred cccc--------------------------------------cCcchHHHHHHHHHHHHHHHHHHHHhccc
Confidence 2100 01269999999999999998887665443
No 261
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.32 E-value=0.0025 Score=70.49 Aligned_cols=149 Identities=11% Similarity=0.089 Sum_probs=89.9
Q ss_pred CchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734 193 KTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDIL 272 (817)
Q Consensus 193 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~ 272 (817)
..+|+.-+++|.+...+...++ ++...++-.....|+.. +|+++...|.+-....+.++.+.++..++.+|+|..|.
T Consensus 249 ~~~w~~Y~~q~vflas~alalL-Y~TVLsf~~lmt~yl~~-~G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~- 325 (432)
T PF06963_consen 249 IRGWRTYFRQPVFLASFALALL-YFTVLSFGGLMTAYLKS-QGYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRA- 325 (432)
T ss_pred hccHHHHHhCHHHHHHHHHHHH-HHHHhcCcHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhh-
Confidence 4457777888766554444443 34444455566777877 59999999999999999999999999999999998764
Q ss_pred cchhhHHHHHHHHhH---HHHHHHHhhhccCCCh--hHHHHHHHHHH-----HHhhhccccccccccccCCCchhHHHHH
Q psy11734 273 SRTNVRKVFATLGAV---LPGVGALAASYVGCNT--SMVAIFFTIGM-----AFMGFCYASIRVNPIDLSPNFSGTIMAL 342 (817)
Q Consensus 273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~l~~-----~~~g~~~~~~~~~~~~~~p~~~g~a~g~ 342 (817)
...+.. .+........+.+.++ ......+..+. +.-++=........+++++++||+.+|+
T Consensus 326 ---------G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gv 396 (432)
T PF06963_consen 326 ---------GLWSLWWQWVCLALCVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGV 396 (432)
T ss_pred ---------HHHHHHHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHH
Confidence 233322 1222222222332222 22222222111 2222222323333344666899999999
Q ss_pred HHhhhhhcccc
Q psy11734 343 SNGLGCVSGMV 353 (817)
Q Consensus 343 ~~~~~~lg~~~ 353 (817)
-+...++...+
T Consensus 397 q~sl~~lf~ll 407 (432)
T PF06963_consen 397 QNSLQSLFELL 407 (432)
T ss_pred HHHHHHHHHHH
Confidence 99998865543
No 262
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.20 E-value=0.0053 Score=66.85 Aligned_cols=277 Identities=11% Similarity=0.031 Sum_probs=155.8
Q ss_pred chhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc--chhHHHHhhhHHHHHhhhhheeccCCCCCC
Q psy11734 14 PALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW--ANVFYIFGAIAVLWFAFWCILCFNDPKSHP 91 (817)
Q Consensus 14 ~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW--r~~f~i~~~~~~i~~~~~~~~~~~~p~~~~ 91 (817)
.+-.+++-...|+++-.|+.+..-+...+|-.++..+|-.+++ ..+. +..+++. .....+..++.+++|..+++..
T Consensus 112 vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs-~~~~sy~~L~~is-l~~~~~a~~~~~fLP~~~~S~~ 189 (412)
T PF01770_consen 112 VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVS-FGGVSYFQLNYIS-LASVSLALLIALFLPMPKRSLF 189 (412)
T ss_pred HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCCHHHHHHHH-HHHHHHHHHHHHHcCCCCcccc
Confidence 3445777778888999999999999999999999999998887 3333 3333333 3344455555566777654432
Q ss_pred CCCHHHHhHhhhhc--cccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhh
Q psy11734 92 YISEKERKYLLDSI--GAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTP 169 (817)
Q Consensus 92 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (817)
..+..+.+....+. +..++.++.+.+-++... ..+
T Consensus 190 f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~------------------- 226 (412)
T PF01770_consen 190 FHRKPPAEQDANESESDKMNESPESSSSTEKSPS------------------------TES------------------- 226 (412)
T ss_pred eeccCccccccccccccccccccccccccccCcc------------------------ccc-------------------
Confidence 22211110000000 000000000000000000 000
Q ss_pred cccCcCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcccccchhhhh
Q psy11734 170 LVAHSGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSVAENGVLSAL 247 (817)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~~~ag~~~~~ 247 (817)
.....++ ++....+++..+||.++.-.+-..+..++++-+.+|.....++. .+-+..-.|.+-..
T Consensus 227 ------~~~~~~l-------~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~ 293 (412)
T PF01770_consen 227 ------SSRKSVL-------RLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAA 293 (412)
T ss_pred ------chHHHHH-------HHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHH
Confidence 0000000 00122356777899988878888888889999999888888775 12233345666777
Q ss_pred hHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-cc
Q psy11734 248 PFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RV 326 (817)
Q Consensus 248 ~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~ 326 (817)
..+.+.++++..|++..++.+.. ...+.....+.+..++++.+.. +.+...+...+......+..+.. .-
T Consensus 294 ~tllgA~~al~~g~v~~~w~~~~--------~l~l~~~S~l~a~~L~lm~~t~-~Iwv~Y~~yIif~~~y~fliTiA~~q 364 (412)
T PF01770_consen 294 STLLGAIAALLAGYVKVNWDRWG--------ELALGVFSLLQAGLLFLMSFTG-NIWVCYAGYIIFRSLYMFLITIASFQ 364 (412)
T ss_pred HHHHHHHHHHHHhHhhcchHHHH--------HHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77788888888888844443322 2223344444455555565554 55555555555555544444433 33
Q ss_pred cccccCCCchhHHHHHHHhhhhhcccccccc
Q psy11734 327 NPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 327 ~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i 357 (817)
.+.++..+.-|-.+|+++++..+-..+-..+
T Consensus 365 IA~~l~~e~yaLVFGiNtf~Al~LQtilT~i 395 (412)
T PF01770_consen 365 IAKNLSEERYALVFGINTFVALVLQTILTLI 395 (412)
T ss_pred HHHhccccceeeeeeeHHHHHHHHHHheEEE
Confidence 4455666788999999998888666555444
No 263
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.75 E-value=1.4 Score=49.57 Aligned_cols=256 Identities=12% Similarity=0.036 Sum_probs=132.5
Q ss_pred ChhhHHHHHHHHHHHHHHh-hhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHH--HHHHHHHHhhhcccC
Q psy11734 519 DERTQGVILSAFYYGYILT-HIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVS--MTVLRFLEGVGEDLE 593 (817)
Q Consensus 519 s~~~~g~~~s~~~~~~~i~-~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~--l~~~R~l~Gig~~~~ 593 (817)
+.....++-+...+..++. .++.+++++|++|++++-.....+...-++.++.- ..+..+ -..-...... .
T Consensus 41 gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~----~ 116 (472)
T TIGR00769 41 GAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLL----P 116 (472)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhc----c
Confidence 4467888888776666666 99999999999999999998888888888887762 001100 0000000000 0
Q ss_pred chhHHhhcCHhHHHHHHHHHH-HHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccc
Q psy11734 594 TPWAAILSSLPVWSLIISEVG-HDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDIL 672 (817)
Q Consensus 594 ~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~ 672 (817)
..++..+.--+.|...+.+.. -.++...++...=.+++|. .+.+|+.-++.+.++++-+|.+++|.+...+.+.+--
T Consensus 117 ~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi--~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~ 194 (472)
T TIGR00769 117 PGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQI--TTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRAS 194 (472)
T ss_pred hhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 001100000012222222211 1122222221222345553 7889999999999999999999999888776531100
Q ss_pred ccchhhH------HHHHHHHHHHHHHHHHHHhh---------------------------------cCchHHHHHHHHH-
Q psy11734 673 SRTNVRK------VFATLGAVLPGVGALAASYV---------------------------------GCNTSMVAICFTI- 712 (817)
Q Consensus 673 ~~~~~r~------~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~~~~~~- 712 (817)
....... .++.+..+...+.+.+..+. ..++....+...+
T Consensus 195 ~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~yL~~ia~~vi 274 (472)
T TIGR00769 195 LGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSPYILDLALLVI 274 (472)
T ss_pred cccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCHHHHHHHHHHH
Confidence 0000011 12223232223333222221 0011111111111
Q ss_pred -HHHHHhhhhhhhhhhccccCC--CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHH
Q psy11734 713 -GMAFMGFCYASIRVNPIDLSP--NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI 783 (817)
Q Consensus 713 -~~~~~~~~~~~~~~~~~~~~~--~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i 783 (817)
.+.........--....+.+| ++++.-+|-.+...++...+...+.+.+.+..| |.....+.-.+.++
T Consensus 275 ~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~G---w~~~a~i~Pii~li 345 (472)
T TIGR00769 275 AYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYG---WLTAALITPLVMLL 345 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHH
Confidence 112222222222244455655 568888888888877777666666688888876 76655554444444
No 264
>KOG1237|consensus
Probab=96.69 E-value=0.22 Score=57.53 Aligned_cols=176 Identities=11% Similarity=0.040 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHH-hhcCcccchhhHHHHHH
Q psy11734 205 VWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFF-IARDILSRTNVRKVFAT 283 (817)
Q Consensus 205 ~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~-g~r~~~~~~~~~~~~~~ 283 (817)
.........+-...+++...-+-.|+.+.++.+...+.-......-........+++++|.+ ||.+. +.
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t----------I~ 108 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT----------IN 108 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH----------HH
Confidence 33455555566777777766677788888888887777777777777778889999999995 55553 56
Q ss_pred HHhHHHHHHHHhhhccC--------------C----C----hhHHHHHHHHH--HHHhhhccccccccccccCC----C-
Q psy11734 284 LGAVLPGVGALAASYVG--------------C----N----TSMVAIFFTIG--MAFMGFCYASIRVNPIDLSP----N- 334 (817)
Q Consensus 284 ~~~~~~~~~~~~~~~~~--------------~----~----~~~~~~~~~l~--~~~~g~~~~~~~~~~~~~~p----~- 334 (817)
++..+...++..+.... . + .........+. ..+.+..-+.......|-.+ +
T Consensus 109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~ 188 (571)
T KOG1237|consen 109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE 188 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence 66665555543332210 0 0 01111111111 22333444444444444222 1
Q ss_pred --chhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccchh
Q psy11734 335 --FSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSEW 412 (817)
Q Consensus 335 --~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (817)
....-+....+..+.|..++..+..++-|+ .+|
T Consensus 189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~---------------------------------------------~~w 223 (571)
T KOG1237|consen 189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDN---------------------------------------------VGW 223 (571)
T ss_pred hhCcccchhHHHHHHHHHHHHHHHHHHhhhhc---------------------------------------------ccc
Confidence 233556666666666666665555544443 268
Q ss_pred HHHHHHHHHHHHHhhhhheeecc
Q psy11734 413 RVVFWIMFLALVISNVFFVLFGS 435 (817)
Q Consensus 413 ~~~f~i~~~~~~~~~~~~~~~~~ 435 (817)
...|-+..+.+.++.++++.-.+
T Consensus 224 ~lgf~i~~~~~~lai~iF~~g~~ 246 (571)
T KOG1237|consen 224 KLGFGIPTVLNALAILIFLPGFP 246 (571)
T ss_pred eeeccHHHHHHHHHHHHHHcCce
Confidence 88888888888888877766543
No 265
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=96.68 E-value=0.0081 Score=60.51 Aligned_cols=57 Identities=14% Similarity=0.332 Sum_probs=40.4
Q ss_pred CCCcchhHHHhHhhhhhhHHHHhhhhhhh---cc-cccCcchhHHHHhhhHHHHHhhhhhe
Q psy11734 26 PNERSFMTALVFAGVQLGSVLATFCSGLI---MS-FTASWANVFYIFGAIAVLWFAFWCIL 82 (817)
Q Consensus 26 ~~~rg~~~gi~~~~~~~G~~ig~~~~~~l---~~-~~~gWr~~f~i~~~~~~i~~~~~~~~ 82 (817)
.|+|+....+...+.++|+++....--.- .+ ....|++++-+.+.+.++.+++..++
T Consensus 1 ~k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 1 QKKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CCccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 47788888888889999988776552211 11 23469999999998877776666555
No 266
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.66 E-value=0.14 Score=57.62 Aligned_cols=146 Identities=8% Similarity=0.059 Sum_probs=93.1
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCC-----ChhHHHHHHHHHHHHHHHH-HHHHHHHHhhhhcccccccch
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGL-----SVAENGVLSALPFLIMWLV-SMSSSALADYLIVRDILSRTN 676 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~-----s~~~~~~~~~~~~~~~~ig-~~~~g~l~dr~g~~~~~~~~~ 676 (817)
|+++...+..++....++.+ --++|.... +.+...++.....+.+.+. .++.+++++|+.|++.+.
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~--- 78 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFY--- 78 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHH---
Confidence 45556666666655555433 334555544 3466777777776776666 899999999999987642
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhh-----cC-------------------------chHHHHHHHHHHHHHHhhhhh-hhh
Q psy11734 677 VRKVFATLGAVLPGVGALAASYV-----GC-------------------------NTSMVAICFTIGMAFMGFCYA-SIR 725 (817)
Q Consensus 677 ~r~~~~~~~~~~~~~~~~~~~~~-----~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~ 725 (817)
.+...+. ..++++.+. +. +.|.........-.......+ ..|
T Consensus 79 -----~~~~~F~--~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW 151 (472)
T TIGR00769 79 -----TVISPFL--GFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFW 151 (472)
T ss_pred -----HHHHHHH--HHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111 111111111 10 123333444445555555565 777
Q ss_pred hhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 726 VNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 726 ~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
..+.|+.. ++..+-.++.+..+++|..+++.+..++.+
T Consensus 152 ~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 152 GFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 889999999999999999999999888763
No 267
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.43 E-value=0.13 Score=53.80 Aligned_cols=154 Identities=23% Similarity=0.241 Sum_probs=96.7
Q ss_pred HHHHHHhhHHHHHHHHhCCCh--hHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHH
Q psy11734 618 GFYLISSDLPKYMSQVIGLSV--AENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALA 695 (817)
Q Consensus 618 ~~~~~~~~~p~~l~~~~g~s~--~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~ 695 (817)
.........+.+..+ .+.+. ...+.......+...++.+..|.++||.|||+.+ ..+......+.+.
T Consensus 17 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~----------~~~~~~~~~~~~~ 85 (338)
T COG0477 17 DLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVL----------IIGLLLFLLGTLL 85 (338)
T ss_pred hcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHH----------HHHHHHHHHHHHH
Confidence 333334455655555 34444 4678888888899999999999999999877432 2222222233333
Q ss_pred HHhhcC-chHHHHHHHHHHHHHHhhhhhhhhhhccccCCC--chHHHHHHHHH-HHHHHHhHHHHHHHHhhcCCccccHH
Q psy11734 696 ASYVGC-NTSMVAICFTIGMAFMGFCYASIRVNPIDLSPN--FSGTIMALSNG-LGCVSGMVAPLTVGFLTQNKTLLEWR 771 (817)
Q Consensus 696 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~-~~~~g~~i~p~~~g~~~~~~g~~~~~ 771 (817)
..+... ..+.........+...+...+.......+..|+ .++...+.... ...++..++|.+.+.+.+. ....|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 164 (338)
T COG0477 86 LALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA-LLWGWR 164 (338)
T ss_pred HHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcchH
Confidence 333332 233333333334555555666667778888885 78999898888 5777888898887777766 334587
Q ss_pred HHHHHHHHHHHH
Q psy11734 772 VVFWIMFLTLFI 783 (817)
Q Consensus 772 ~~~~~~~~~~~i 783 (817)
..+.........
T Consensus 165 ~~~~~~~~~~~~ 176 (338)
T COG0477 165 AAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHH
Confidence 755555555443
No 268
>KOG3810|consensus
Probab=96.43 E-value=0.0085 Score=62.41 Aligned_cols=309 Identities=9% Similarity=0.022 Sum_probs=172.9
Q ss_pred hhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHh--hhHHHHHhhhhheeccCCCCCCCC
Q psy11734 16 LCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFG--AIAVLWFAFWCILCFNDPKSHPYI 93 (817)
Q Consensus 16 ~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~--~~~~i~~~~~~~~~~~~p~~~~~~ 93 (817)
-++++-...+|+++.++.|..-+..-.|-..|..++-.+++ .+|-.-+..+- .....+..+...++|..+++....
T Consensus 115 YysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs--~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 115 YYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVS--LETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred hhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhh--hcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence 35667777889999999999999999999999999998887 44444444432 233344445555666554332211
Q ss_pred CHHHHhHhhhhccccccccccccccCccccchhhhhhhhchhhccccccccccccCCccchhHHHHHHHHHHhhhhcccC
Q psy11734 94 SEKERKYLLDSIGAAERRKDAKFDWDERTQGVILSSFYYGYTLTHIPGGILSQKFGGKHTLGLGFLSTALLTLLTPLVAH 173 (817)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (817)
+.+++.. ..+.++.. ++.+.....
T Consensus 193 ~~~~~~~-v~~~e~~~-------~~~~~~~~l------------------------------------------------ 216 (433)
T KOG3810|consen 193 RLEDKIS-VGDLEEMN-------PQASYMSYL------------------------------------------------ 216 (433)
T ss_pred cccccce-eccchhcC-------ccchhhHHH------------------------------------------------
Confidence 1111111 01111100 010000000
Q ss_pred cCCchhhhHHhhhccCcccCchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCc-ccccchhhhhhHHHH
Q psy11734 174 SGPVSMTVLRFLEGVGEDLKTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLS-VAENGVLSALPFLIM 252 (817)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s-~~~ag~~~~~~~i~~ 252 (817)
+ ..-......+.+..+||.+..=.+-..+..+++|-+.+|......+...-+ ..--|..=....+.+
T Consensus 217 ---------~---~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vyNG~veAv~tlLG 284 (433)
T KOG3810|consen 217 ---------R---GAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVYNGAVEAVSTLLG 284 (433)
T ss_pred ---------H---HHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhhcCHHHHHHHHHH
Confidence 0 000001223556778888766666667778899999998888877753111 112344444556677
Q ss_pred HHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHHhhhccCCChhHHHHHHHHHHHHhhhccccc-ccccccc
Q psy11734 253 WLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAIFFTIGMAFMGFCYASI-RVNPIDL 331 (817)
Q Consensus 253 ~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~-~~~~~~~ 331 (817)
+++.+..|.+.-.+.|. +..++.++.+..+-.++.+..+. +.++..+...+.....+...+.. ...+.++
T Consensus 285 a~~~~~~g~l~i~w~r~--------g~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL 355 (433)
T KOG3810|consen 285 AIAALAAGYLNINWNRW--------GDLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLTITIATFQIARNL 355 (433)
T ss_pred HHHHHHHHheeeccchh--------hHHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhhhhHHHHHHHHhh
Confidence 77888888877544433 23346666555555555555554 45555555554444444443333 4455667
Q ss_pred CCCchhHHHHHHHhhhhhcccccccccceecccccccCCCCCCCCCccchhhcccCccccccccccccccccccCCccch
Q psy11734 332 SPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNIISINPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLSE 411 (817)
Q Consensus 332 ~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (817)
..|.-|-.+|++.++.-+-..+-..+ ..|..|- .+++. + .-.-
T Consensus 356 ~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~----~L~ir----------------------------~--Q~~~ 398 (433)
T KOG3810|consen 356 SSELFGLVFGINTFVALILQSILTLI---VVDDRGL----GLDIR----------------------------T--QFVV 398 (433)
T ss_pred hhhhheeeeehHHHHHHHHHHhheEE---EEccccc----CCCcc----------------------------e--eEEE
Confidence 77888999999988877555544333 3454431 00000 0 0123
Q ss_pred hHHHHHHHHHHHHHhhhhheeeccccccc
Q psy11734 412 WRVVFWIMFLALVISNVFFVLFGSGEVQY 440 (817)
Q Consensus 412 ~~~~f~i~~~~~~~~~~~~~~~~~~~~~~ 440 (817)
|..-|.+.+++.+++..+....+++.+.+
T Consensus 399 Y~~Yf~v~~~i~~~~~~~~~~~~~~~~~~ 427 (433)
T KOG3810|consen 399 YSSYFIVLGVIFLIGFGIEYLMCRRNKVP 427 (433)
T ss_pred EeehHHHHHHHHHHHHHHHHHHhhcCCCC
Confidence 66678888888888877666555544433
No 269
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=96.17 E-value=0.81 Score=50.77 Aligned_cols=162 Identities=19% Similarity=0.123 Sum_probs=86.4
Q ss_pred hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc-c-c
Q psy11734 596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDI-L-S 673 (817)
Q Consensus 596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~-~-~ 673 (817)
+.+++|-|.+..+.+.....-.++..--.-...=+.+ .|++.++.+.+. +..+.-.++.|+++.|+-+.+- + .
T Consensus 271 l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~----li~~P~qii~~~~~~Kws~g~~P~~~ 345 (544)
T PF13000_consen 271 LWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLV----LIDFPFQIILPYYIGKWSAGSPPLDV 345 (544)
T ss_pred HHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHH----HHhhhHHHHHHHHhhhhhcCCCcccc
Confidence 4577888888888777777776666655555555556 699998887655 4444445555555555433221 0 0
Q ss_pred ----cch-----------------hhHHHHHHHHHHHH----HHHHHHHhhc-Cc--hHHHHHHHHHHHHHHhhhhhhhh
Q psy11734 674 ----RTN-----------------VRKVFATLGAVLPG----VGALAASYVG-CN--TSMVAICFTIGMAFMGFCYASIR 725 (817)
Q Consensus 674 ----~~~-----------------~r~~~~~~~~~~~~----~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~ 725 (817)
.++ .|.|. .++..-. +........+ .+ +.......+.......+.....+
T Consensus 346 ~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl--~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmF 423 (544)
T PF13000_consen 346 DNKALPNFSRANKIIRLLVGDAGALRPWL--WAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMF 423 (544)
T ss_pred ccccccccccccchhhhhhccchhhHHHH--HHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 000 01111 1221111 1111111222 11 12222222333333333222222
Q ss_pred ----hhccccC-CCchHHHHHHHHHHHHHHHhHHHHHHHHhhcC
Q psy11734 726 ----VNPIDLS-PNFSGTIMALSNGLGCVSGMVAPLTVGFLTQN 764 (817)
Q Consensus 726 ----~~~~~~~-~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~ 764 (817)
+.-+.+. |..=||.|-+.|++.++|+-.-..+.=++.|.
T Consensus 424 Vai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 424 VAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 3333443 68899999999999999998888777777775
No 270
>KOG3098|consensus
Probab=96.13 E-value=0.088 Score=58.50 Aligned_cols=155 Identities=14% Similarity=-0.070 Sum_probs=88.7
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHh--hCCcc-cccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcc
Q psy11734 196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEV--IGLSV-AENGVLSALPFLIMWLVSMSSSALADFFIARDIL 272 (817)
Q Consensus 196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~--~g~s~-~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~ 272 (817)
..+++++|+.......++..+...--.....|..+.-. ++.+. ...+......+++..+++...+.+.+|..+...
T Consensus 233 ~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~- 311 (461)
T KOG3098|consen 233 TFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGR- 311 (461)
T ss_pred HHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhccc-
Confidence 34677888887777777766555555556666655432 23322 234555666778888888888888887655432
Q ss_pred cchhhHHHHHHHHhHHHHHHHHhhhcc-CCC----------------hhHHHHHHHHHHHHhhhccccccccccccCCCc
Q psy11734 273 SRTNVRKVFATLGAVLPGVGALAASYV-GCN----------------TSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNF 335 (817)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----------------~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~ 335 (817)
+..+.++..+..+..++.... +.+ .....+.-.+.+..-....+........+.|++
T Consensus 312 ------~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~~~~ 385 (461)
T KOG3098|consen 312 ------KPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLYPDD 385 (461)
T ss_pred ------CcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHhcCc
Confidence 222455554444443333221 111 112222222222222233333477778888999
Q ss_pred hhHHHHHHHhhhhhcccccccc
Q psy11734 336 SGTIMALSNGLGCVSGMVAPLT 357 (817)
Q Consensus 336 ~g~a~g~~~~~~~lg~~~~~~i 357 (817)
|.++.++.-+-+.++++++-..
T Consensus 386 ~~~~fsi~kfyq~~~s~v~~f~ 407 (461)
T KOG3098|consen 386 RAQAFSLFKFYQSVASCVAFFF 407 (461)
T ss_pred hHHHHHHHHHHHHHHHHHHhhh
Confidence 9999998888888776654443
No 271
>PRK03612 spermidine synthase; Provisional
Probab=96.03 E-value=0.46 Score=54.60 Aligned_cols=152 Identities=13% Similarity=-0.003 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHH
Q psy11734 608 LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAV 687 (817)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~ 687 (817)
+.+..++..++...+......++...+|-+....+.+.+.+.++..+|..+++++.++.-++.. + +-+.++.+
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~------~-~e~~i~l~ 91 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV------A-VELLLALL 91 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH------H-HHHHHHHH
Confidence 3344444455555555556666666678888888888888889999999888877643322211 0 00011111
Q ss_pred HHHHHHHHHHhhcC--c-hHHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhc-
Q psy11734 688 LPGVGALAASYVGC--N-TSMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQ- 763 (817)
Q Consensus 688 ~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~- 763 (817)
......++...... . ........++..++.|+..|.......+...++.+...|-......+|+.+|+.+.+.+.-
T Consensus 92 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp 171 (521)
T PRK03612 92 GGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLP 171 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHH
Confidence 11111111111110 1 1112223333455556666655544443333345677777788888899999888886654
Q ss_pred CCc
Q psy11734 764 NKT 766 (817)
Q Consensus 764 ~~g 766 (817)
..|
T Consensus 172 ~lG 174 (521)
T PRK03612 172 RLG 174 (521)
T ss_pred hcc
Confidence 444
No 272
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.00 E-value=0.013 Score=61.46 Aligned_cols=75 Identities=29% Similarity=0.546 Sum_probs=65.4
Q ss_pred cccCCh--hhHHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcc--hHHHHHHHHHHhhhc
Q psy11734 515 KFDWDE--RTQGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSG--PVSMTVLRFLEGVGE 590 (817)
Q Consensus 515 ~~~~s~--~~~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s--~~~l~~~R~l~Gig~ 590 (817)
+++.+. .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.+++.+.. + .+.+++.|+.+|++.
T Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~g~~~ 108 (338)
T COG0477 31 TLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAP--NVGLALLLILRLLQGLGG 108 (338)
T ss_pred HcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCc--cchHHHHHHHHHHHHhhh
Confidence 454444 5889999999999999999999999999999999888887777778888887 5 889999999999998
Q ss_pred c
Q psy11734 591 D 591 (817)
Q Consensus 591 ~ 591 (817)
+
T Consensus 109 ~ 109 (338)
T COG0477 109 G 109 (338)
T ss_pred H
Confidence 7
No 273
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.70 E-value=0.022 Score=47.19 Aligned_cols=77 Identities=19% Similarity=0.237 Sum_probs=63.7
Q ss_pred HHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhHHHHHHHH
Q psy11734 215 HDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAVLPGVGAL 294 (817)
Q Consensus 215 ~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (817)
.+.+-+.+...+|...+| .++|..++|++.+...++.++|.+...++.++..+++. ...+.+..++.+.
T Consensus 4 mGigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~----------~~~~l~~~~~~~~ 72 (85)
T PF06779_consen 4 MGIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRL----------LRAGLLLTVLSTA 72 (85)
T ss_pred hhhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHH----------HHHHHHHHHHHHH
Confidence 355667777888877777 69999999999999999999999999999998666664 7788888888888
Q ss_pred hhhccCCC
Q psy11734 295 AASYVGCN 302 (817)
Q Consensus 295 ~~~~~~~~ 302 (817)
.+.++++.
T Consensus 73 ~ma~~~~~ 80 (85)
T PF06779_consen 73 AMALTHSF 80 (85)
T ss_pred HHHHHhch
Confidence 88777643
No 274
>KOG3574|consensus
Probab=95.66 E-value=1.3 Score=47.38 Aligned_cols=163 Identities=16% Similarity=0.081 Sum_probs=89.8
Q ss_pred hHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccc
Q psy11734 596 WAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRT 675 (817)
Q Consensus 596 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~ 675 (817)
++++++-|.+..+.......-.++.+-....+.-+.| .|++.++-+.+.....-.+++.....|.++.+ +|+.. +
T Consensus 258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~--~~pl~--~ 332 (510)
T KOG3574|consen 258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAG--PRPLN--V 332 (510)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCC--CCcch--H
Confidence 4677777887777777777777888777777877777 69999888766533333444444444444331 22221 1
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhc---C--c--hHHHHHHHHHHHHHHh----hhhhhhhhhccccCC-CchHHHHHHH
Q psy11734 676 NVRKVFATLGAVLPGVGALAASYVG---C--N--TSMVAICFTIGMAFMG----FCYASIRVNPIDLSP-NFSGTIMALS 743 (817)
Q Consensus 676 ~~r~~~~~~~~~~~~~~~~~~~~~~---~--~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~g~~~g~~ 743 (817)
..|....-+.... +..++..+.+ . + +....++.+....+.+ ..+-...+..+++.+ +.-||-+.+.
T Consensus 333 ~lka~~~R~~~~~--~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlL 410 (510)
T KOG3574|consen 333 FLKAVPYRLGGGL--VQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLL 410 (510)
T ss_pred HHHhhhHHHHHHH--HHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHH
Confidence 2222221122211 1222222211 1 1 1111112121222221 122222244455554 7799999999
Q ss_pred HHHHHHHHhHHHHHHHHhhcCC
Q psy11734 744 NGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 744 ~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
|+..++|+-.=..+...+.|..
T Consensus 411 NTLsnLGg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 411 NTLSNLGGNWPGTVALWLADGL 432 (510)
T ss_pred HHHHHhcCCcHHHHHHHhcccC
Confidence 9999999988888888888854
No 275
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.16 E-value=3.1 Score=45.70 Aligned_cols=67 Identities=12% Similarity=0.013 Sum_probs=50.1
Q ss_pred HHHHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 523 QGVILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 523 ~g~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
.+.+.-+-.+-..+..+...++.+|+.-+.=..+..++..++.++.++++ +.+.=+++=.+.+++.|
T Consensus 61 t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~--~v~~~l~Gv~las~ssg 127 (402)
T PF02487_consen 61 TGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSP--SVWVRLLGVVLASLSSG 127 (402)
T ss_pred chHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeecc--chhHHHHHHHHHhhhhh
Confidence 44455555556666777788888988766666677778888889999998 88887777777777777
No 276
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=94.72 E-value=0.11 Score=56.76 Aligned_cols=74 Identities=7% Similarity=0.064 Sum_probs=47.7
Q ss_pred cCCcccccchhhhhhhhccCCCCcchhHHHhHhhhhhhHHHHhhhhhhhcccccCc--chhHHHHhhhHHHHHhhhhhee
Q psy11734 6 NFPKGTTFPALCTLLAQWSPPNERSFMTALVFAGVQLGSVLATFCSGLIMSFTASW--ANVFYIFGAIAVLWFAFWCILC 83 (817)
Q Consensus 6 G~g~g~~~~~~~~~i~~~~p~~~rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gW--r~~f~i~~~~~~i~~~~~~~~~ 83 (817)
+++.|..-..-..+ +..|++ ..++-|+++.+.++++|+..=-.+.+ .|| |..+.+..++.++..+..++.+
T Consensus 123 s~ssg~GE~tfL~l-t~~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~--~g~s~~~tll~~~~lp~~~~~~~f~~L 195 (402)
T PF02487_consen 123 SLSSGLGEVTFLSL-THFYGK----SSLSAWSSGTGGAGLVGALYYLGLTT--LGLSPRTTLLIMLVLPAIFLLSYFFLL 195 (402)
T ss_pred hhhhhhhHHHHHHH-HHhcCc----cccccccCCcChhhHHHHHHHHHHHH--hCcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 33334333333333 456653 46788999999999988887665554 455 7788888877766666666666
Q ss_pred ccC
Q psy11734 84 FND 86 (817)
Q Consensus 84 ~~~ 86 (817)
|++
T Consensus 196 ~~~ 198 (402)
T PF02487_consen 196 PSP 198 (402)
T ss_pred ccc
Confidence 654
No 277
>PRK03612 spermidine synthase; Provisional
Probab=94.66 E-value=0.24 Score=56.79 Aligned_cols=148 Identities=14% Similarity=0.038 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHHHHHHHhH
Q psy11734 208 LIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKVFATLGAV 287 (817)
Q Consensus 208 ~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~~~~~~~~ 287 (817)
..+..++.+.+-...-.....++....|-+....+.+...+..+..+|+.+++++.++..++.. +.. +.++..
T Consensus 19 l~~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~------~~e-~~i~l~ 91 (521)
T PRK03612 19 LLAAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFV------AVE-LLLALL 91 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHH------HHH-HHHHHH
Confidence 3444455566666666666667777789999999999999999999999999988744333321 000 111111
Q ss_pred HHHHH---HHhhhccCCChhHHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhcccccccccceec
Q psy11734 288 LPGVG---ALAASYVGCNTSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLT 362 (817)
Q Consensus 288 ~~~~~---~~~~~~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~ 362 (817)
..... .....+...........+.+..++.|+..|...-...+...++.+...|-.+....+|+++|..+.+.+.
T Consensus 92 ~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~l~G~~~Pl~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vL 169 (521)
T PRK03612 92 GGLSALILYAAFAFQGLSRLLLYVLVLLIGLLIGMEIPLLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLL 169 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHH
Confidence 11110 0111111001111222233344566666666544444433445677788888899999999999888765
No 278
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=94.53 E-value=1.4 Score=41.57 Aligned_cols=140 Identities=11% Similarity=-0.075 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHhhHHHHHHHHhC-----CChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHH
Q psy11734 612 EVGHDYGFYLISSDLPKYMSQVIG-----LSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGA 686 (817)
Q Consensus 612 ~~~~~~~~~~~~~~~p~~l~~~~g-----~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~ 686 (817)
.++...++........+.++.... .++..--.-.++......+++++.+.+.+++|.|.. ++++.
T Consensus 5 f~~~Ftaf~t~~~i~~svi~s~~~~~~~~i~~~~G~~slai~Y~~~~~s~l~~P~iv~~lg~K~s----------m~lg~ 74 (156)
T PF05978_consen 5 FMFLFTAFQTQSFIQESVIHSVHERNPSSISAGLGYYSLAILYGSFAISCLFAPSIVNKLGPKWS----------MILGS 74 (156)
T ss_pred HHHHHHHHhhhhHHHHHHHHHHhhcCcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhhHHH----------HHHHH
Confidence 344444455444444555543211 222222234456667778888899999999997743 34555
Q ss_pred HHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhhhhhhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 687 VLPGVGALAASYVGCNTSMVAICFTIGMAFMGFCYASIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 687 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
+...+..+...+ ++.+..+..-.+.+++.+......-....+... +.+++-.|+.-.+.+.+..+|..+.-.+.+
T Consensus 75 ~~y~~y~~~~~~--~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~~~ 150 (156)
T PF05978_consen 75 LGYAIYIASFFY--PNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTGIFWAIFQSSLIFGNLFLFFIFQ 150 (156)
T ss_pred HHHHHHHHHHHh--hhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555443333322 245556666666666666666555555666555 678888888888888877777776555443
No 279
>KOG3810|consensus
Probab=93.81 E-value=0.7 Score=48.66 Aligned_cols=266 Identities=12% Similarity=0.121 Sum_probs=160.4
Q ss_pred cccCChhhHH-HHHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc--
Q psy11734 515 KFDWDERTQG-VILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED-- 591 (817)
Q Consensus 515 ~~~~s~~~~g-~~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~-- 591 (817)
+.|+++.|.. =+.-.....|.+.-.+.=.+.|..--|++++.--+.......+.-+.+ +.+.+=+.-+.-|...+
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~--sV~~mQvlE~FyG~~tAaE 112 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGP--SVKAMQVLEFFYGPATAAE 112 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcC--CchheeeehhhcChHHHHH
Confidence 3344444332 233345566777777788889988889988877777777777777777 88777777777777766
Q ss_pred --------------------------------------------------------------------------------
Q psy11734 592 -------------------------------------------------------------------------------- 591 (817)
Q Consensus 592 -------------------------------------------------------------------------------- 591 (817)
T Consensus 113 IAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 113 IAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred HhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence
Q ss_pred ---------------cCc---------------hhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC-CChhH
Q psy11734 592 ---------------LET---------------PWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG-LSVAE 640 (817)
Q Consensus 592 ---------------~~~---------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g-~s~~~ 640 (817)
.+. .+.+..++|++..=.+=+.+..++++-+..+....-++... -...-
T Consensus 193 ~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vy 272 (433)
T KOG3810|consen 193 RLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVY 272 (433)
T ss_pred cccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhh
Confidence 000 11233456665333333445555666666666665555421 11112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhhcCchHHHHHHHHHHHHHHhhh
Q psy11734 641 NGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYVGCNTSMVAICFTIGMAFMGFC 720 (817)
Q Consensus 641 ~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (817)
-|..=++..+.++++.+..|++.-++.|. +...+..+....+.+++.+.... +.|...+...+......+.
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~--------g~~ll~~~s~~~agllf~m~~t~-~Iw~~Ya~yvlfr~~y~l~ 343 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRW--------GDLLLAVGSAVQAGLLFIMAQTQ-HIWVCYAGYVLFRVIYQLT 343 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchh--------hHHHHHHHHHHhhhhhhhhhccc-ceehhhhhHHHHHhhHhhh
Confidence 23344456677788888888887655544 33455566555555555555544 6777777777776666655
Q ss_pred hhhhh-hhccccCCCchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc--------ccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 721 YASIR-VNPIDLSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL--------LEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 721 ~~~~~-~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~--------~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
..... ..+.+...+.-|...|+..++.-+-..+-..+ ..|..|- .-|...|.+.+.+.+++....+..
T Consensus 344 itiA~~~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~i---Vvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~ 420 (433)
T KOG3810|consen 344 ITIATFQIARNLSSELFGLVFGINTFVALILQSILTLI---VVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLM 420 (433)
T ss_pred hhHHHHHHHHhhhhhhheeeeehHHHHHHHHHHhheEE---EEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHH
Confidence 54443 44555666888999999877765554444333 4443221 124567888888888887665544
Q ss_pred ccC
Q psy11734 792 GSG 794 (817)
Q Consensus 792 ~~~ 794 (817)
.++
T Consensus 421 ~~~ 423 (433)
T KOG3810|consen 421 CRR 423 (433)
T ss_pred hhc
Confidence 333
No 280
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=92.84 E-value=0.89 Score=50.02 Aligned_cols=110 Identities=14% Similarity=0.097 Sum_probs=78.1
Q ss_pred HHHHHHHHHHHHHHHhh--cCch------HHHHHHHHHHHHHHhhhhhhhhhhccccCC----CchHHHHHHHHHHHHHH
Q psy11734 683 TLGAVLPGVGALAASYV--GCNT------SMVAICFTIGMAFMGFCYASIRVNPIDLSP----NFSGTIMALSNGLGCVS 750 (817)
Q Consensus 683 ~~~~~~~~~~~~~~~~~--~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~g~~~~~~~~g 750 (817)
+++.++..++.+++... +... ....+.+.+...+.|..-+.......|.++ +++..........-++|
T Consensus 5 ~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G 84 (372)
T PF00854_consen 5 LLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIG 84 (372)
T ss_dssp HHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhh
Confidence 46666666666663332 2121 345555555666666667777777777665 23777888889999999
Q ss_pred HhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHhccCc
Q psy11734 751 GMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLFGSGE 795 (817)
Q Consensus 751 ~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 795 (817)
+.+++.+.+++.++.+ |...|.+.++..+++.+.++.-++..
T Consensus 85 ~~~~~~~~~~i~~~~~---~~~~f~i~~~~~~~~~~~f~~~~~~y 126 (372)
T PF00854_consen 85 SLFSPTLVPYIQQNYG---WFLGFGIPAIGMLLALIVFLSGRKRY 126 (372)
T ss_dssp HHHHHHCCCHHHHCS----HHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred hHhhcccchhhccccc---hhhhhhHHHHHHHHHHHHHHhCCcCC
Confidence 9999999999998876 99999999999999888877664443
No 281
>KOG0637|consensus
Probab=92.22 E-value=0.24 Score=54.13 Aligned_cols=151 Identities=18% Similarity=0.161 Sum_probs=103.0
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHH
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFA 682 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~ 682 (817)
++........+...++.-.-.+++|+|++. +|.+.+..+..-...-+.+++.+++.|..+||...|.. +||.++
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~G-----RRRPfI 105 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYG-----RRRPFI 105 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccc-----cccchH
Confidence 345555566667777777778999999999 69999988888888889999999999999998765532 256677
Q ss_pred HHHHHHHHHHHHHHHhhcC-------ch-----HHHHHHHHHHHHHH----hhhhhhhhhhccccCC-CchHH-HHHHHH
Q psy11734 683 TLGAVLPGVGALAASYVGC-------NT-----SMVAICFTIGMAFM----GFCYASIRVNPIDLSP-NFSGT-IMALSN 744 (817)
Q Consensus 683 ~~~~~~~~~~~~~~~~~~~-------~~-----~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~-~~~g~-~~g~~~ 744 (817)
..+.....+.++++.+.++ +. ...+..+++..... .....+.-+...|... +++-+ +++...
T Consensus 106 ~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~ 185 (498)
T KOG0637|consen 106 LAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFS 185 (498)
T ss_pred HHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHH
Confidence 7777777777777766421 11 23333333333322 2344445567777765 45555 888888
Q ss_pred HHHHHHHhHHHHHHH
Q psy11734 745 GLGCVSGMVAPLTVG 759 (817)
Q Consensus 745 ~~~~~g~~i~p~~~g 759 (817)
.+..+|+.+|=...+
T Consensus 186 ~f~avGnvLGY~~g~ 200 (498)
T KOG0637|consen 186 FFMAVGNVLGYALGS 200 (498)
T ss_pred HHHHhcceeeeeccc
Confidence 888888877654444
No 282
>KOG3574|consensus
Probab=91.74 E-value=1.6 Score=46.71 Aligned_cols=166 Identities=14% Similarity=0.063 Sum_probs=99.3
Q ss_pred HHHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccch
Q psy11734 196 WAAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRT 275 (817)
Q Consensus 196 ~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~ 275 (817)
.+++++-|++..........-.++-+--...+.-+.| +|++.++-++...+....+++.....|+++.+. |+. .+
T Consensus 258 l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~--~pl--~~ 332 (510)
T KOG3574|consen 258 LRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGP--RPL--NV 332 (510)
T ss_pred HHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCC--Ccc--hH
Confidence 4577788887777766677777777777778888887 699999988877766666777777777766532 221 11
Q ss_pred hhHHHHHHHHhHHHHHHHHhhh-ccCC-C----hhHHHHHHHHHHHHhhhcccc---ccccccc-cCCCchhHHHHHHHh
Q psy11734 276 NVRKVFATLGAVLPGVGALAAS-YVGC-N----TSMVAIFFTIGMAFMGFCYAS---IRVNPID-LSPNFSGTIMALSNG 345 (817)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~-~~~~-~----~~~~~~~~~l~~~~~g~~~~~---~~~~~~~-~~p~~~g~a~g~~~~ 345 (817)
..|.+...+........+.... .... + ....+..+....+...+.... ..+..+. .+|..-|+-+.+.|+
T Consensus 333 ~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNT 412 (510)
T KOG3574|consen 333 FLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNT 412 (510)
T ss_pred HHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHH
Confidence 2233333333333322222221 1111 1 111122221122222222222 2333344 456889999999999
Q ss_pred hhhhcccccccccceeccccc
Q psy11734 346 LGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 346 ~~~lg~~~~~~i~g~l~~~~~ 366 (817)
..++|+-.=..++..+.|..+
T Consensus 413 LsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 413 LSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred HHHhcCCcHHHHHHHhcccCc
Confidence 999999998888888888764
No 283
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=90.84 E-value=3.2 Score=46.27 Aligned_cols=166 Identities=16% Similarity=0.123 Sum_probs=89.9
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc-----
Q psy11734 197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI----- 271 (817)
Q Consensus 197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~----- 271 (817)
.+++|-|++....+.....-.++-+.-.-...-+.| .|++.++.+....+..-.+++..+..|+++. |+++.
T Consensus 272 ~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws~--g~~P~~~~~~ 348 (544)
T PF13000_consen 272 WKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWSA--GSPPLDVDNK 348 (544)
T ss_pred HHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhhc--CCCccccccc
Confidence 467888988888887777777776665556666666 6999998777665555455555555555443 22211
Q ss_pred ---------------ccchhhHHHHHHHHhH----HHHHHHHhhhccC-CC--hhHHHHHHHHHHHHhhhcccc----cc
Q psy11734 272 ---------------LSRTNVRKVFATLGAV----LPGVGALAASYVG-CN--TSMVAIFFTIGMAFMGFCYAS----IR 325 (817)
Q Consensus 272 ---------------~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~--~~~~~~~~~l~~~~~g~~~~~----~~ 325 (817)
++.....+..+ .+.. ...++.......+ +. +......+++........... ..
T Consensus 349 ~l~~~~~~~~~~~~l~g~~g~L~~Wl-~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~ 427 (544)
T PF13000_consen 349 ALPNFSRANKIIRLLVGDAGALRPWL-WAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIM 427 (544)
T ss_pred cccccccccchhhhhhccchhhHHHH-HHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000011111 1111 1111112222222 11 112222222222222222222 22
Q ss_pred ccccc-cCCCchhHHHHHHHhhhhhcccccccccceeccccc
Q psy11734 326 VNPID-LSPNFSGTIMALSNGLGCVSGMVAPLTVGFLTQNII 366 (817)
Q Consensus 326 ~~~~~-~~p~~~g~a~g~~~~~~~lg~~~~~~i~g~l~~~~~ 366 (817)
+.-.. .+|..-||-+.+.|++.++|+..-..+.=.+.|.+.
T Consensus 428 AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~fT 469 (544)
T PF13000_consen 428 AFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDYFT 469 (544)
T ss_pred HHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhhcc
Confidence 22233 457889999999999999999998888888888763
No 284
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=90.77 E-value=2.2 Score=40.17 Aligned_cols=63 Identities=21% Similarity=0.293 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 526 ILSAFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 526 ~~s~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
-.++....+++++++.+.+.+++|.|+.++++.+.+.+-.... +-+ +.+.++..-++.|++.+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~--~~~~l~~~s~l~G~~~a 104 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYP--NSYTLYPASALLGFGAA 104 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-Hhh--hHHHHHHHHHHHhhhhH
Confidence 3455666677888888999999999999999999999766554 455 78899999999999988
No 285
>KOG1479|consensus
Probab=89.81 E-value=14 Score=40.48 Aligned_cols=177 Identities=12% Similarity=0.078 Sum_probs=83.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHHH
Q psy11734 604 PVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFAT 683 (817)
Q Consensus 604 ~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~ 683 (817)
..+..++...........+.+-.+.|.++..+.++ +..+.....+.+.+...+.-.+--|...|.. +.-.....
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~----~~~~~~l~ 92 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR----TRVGYLLS 92 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHH
Confidence 34555566666677888888888877776545444 3333333444444444444444444333310 00111111
Q ss_pred HHHHHHHHHHHHHHh--hcCch----HHHHHHHHHHHHHHhhhhhhhhhhccccCCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 684 LGAVLPGVGALAASY--VGCNT----SMVAICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 684 ~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
...++ .+..+.+.+ ..... +.......+...+.+.......-...+..+++....++=.+..+.+.+...-..
T Consensus 93 ~~~il-~i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqavm~G~a~aG~l~Sl~~i~t 171 (406)
T KOG1479|consen 93 LIAIL-FIVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAVMSGQALAGTLTSLLRILT 171 (406)
T ss_pred HHHHH-HHHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHHHhcchhHhHHHHHHHHHH
Confidence 11111 122222223 11111 333444444555555666666666776666887777666666665555444333
Q ss_pred HHHhhcCCccccHHHHHHHHHHHHHHHHHHHH
Q psy11734 758 VGFLTQNKTLLEWRVVFWIMFLTLFISNVFFV 789 (817)
Q Consensus 758 ~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~ 789 (817)
-...-|.. .+-...|.+..+..++|.+.+.
T Consensus 172 ka~~~~~~--~sA~~yF~~s~~~~llC~i~y~ 201 (406)
T KOG1479|consen 172 KAAFSDSR--TSALIYFITSTVILLLCFVLYL 201 (406)
T ss_pred HHhcCCCC--ceeehhHHHHHHHHHHHHHHHH
Confidence 33222222 1122344444455555555555
No 286
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.62 E-value=40 Score=37.88 Aligned_cols=56 Identities=11% Similarity=-0.110 Sum_probs=35.0
Q ss_pred chHHHHHHHHHHHHHHhhhhhhhhhhcccc-CCCchHHHHHHHHHHHHHHHhHHHHH
Q psy11734 702 NTSMVAICFTIGMAFMGFCYASIRVNPIDL-SPNFSGTIMALSNGLGCVSGMVAPLT 757 (817)
Q Consensus 702 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~i~p~~ 757 (817)
+.+..++..++.++..|...+.......+. .+++|-.+..+++..-.+|-..|..+
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666667777765555554444443 34778777777777766666666655
No 287
>KOG1237|consensus
Probab=88.35 E-value=13 Score=43.20 Aligned_cols=174 Identities=12% Similarity=0.035 Sum_probs=113.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhh-cccccccchhhHHHHH
Q psy11734 605 VWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLI-VRDILSRTNVRKVFAT 683 (817)
Q Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g-~~~~~~~~~~r~~~~~ 683 (817)
...++..-.+-..+++++...+-.|+.+.+|.+...+.-....+..........+++++|-+- |..+ +.
T Consensus 39 ~~~il~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~t----------I~ 108 (571)
T KOG1237|consen 39 APFILGNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFT----------IN 108 (571)
T ss_pred HHHHHHHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHH----------HH
Confidence 344555566777788888899999999999999988888888888888888899999999864 3333 34
Q ss_pred HHHHHHHHHHHHHHhhc--------------C----c-h--HH---HHHHHHHHHHHHhhhhhhhhhhccccCC----C-
Q psy11734 684 LGAVLPGVGALAASYVG--------------C----N-T--SM---VAICFTIGMAFMGFCYASIRVNPIDLSP----N- 734 (817)
Q Consensus 684 ~~~~~~~~~~~~~~~~~--------------~----~-~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 734 (817)
++.++...++.++.... . + + .. ....+-+...+.+..-+.....-.|.++ +
T Consensus 109 ~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~ 188 (571)
T KOG1237|consen 109 IGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVE 188 (571)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcch
Confidence 44444444433332210 0 0 0 01 1111111122222333444455555544 1
Q ss_pred --chHHHHHHHHHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 735 --FSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 735 --~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
.+..-+.-.....+.|..++-.+.-++.|+.+ |...|.+..++..++.++++..
T Consensus 189 ~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~---w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 189 VKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVG---WKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hhCcccchhHHHHHHHHHHHHHHHHHHhhhhccc---ceeeccHHHHHHHHHHHHHHcC
Confidence 23456666777778888888888888877765 9899999999988888777654
No 288
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=88.01 E-value=18 Score=41.19 Aligned_cols=46 Identities=2% Similarity=-0.041 Sum_probs=38.8
Q ss_pred hhhhh-hhhhhccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhc
Q psy11734 718 GFCYA-SIRVNPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQ 763 (817)
Q Consensus 718 ~~~~~-~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~ 763 (817)
....+ ..|..+.|+.. ++..+-.++.+..+++|..++..+...+.+
T Consensus 158 svvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 158 SVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344 45788889887 899999999999999999999999888887
No 289
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=86.10 E-value=0.45 Score=52.39 Aligned_cols=74 Identities=16% Similarity=0.195 Sum_probs=61.6
Q ss_pred cccCCcccccchhhhhhhhccCCCC---cchhHHHhHhhhhhhHHHHhhhhhhhcccccCcchhHHHHhhhHHHHHhh
Q psy11734 4 MSNFPKGTTFPALCTLLAQWSPPNE---RSFMTALVFAGVQLGSVLATFCSGLIMSFTASWANVFYIFGAIAVLWFAF 78 (817)
Q Consensus 4 l~G~g~g~~~~~~~~~i~~~~p~~~---rg~~~gi~~~~~~~G~~ig~~~~~~l~~~~~gWr~~f~i~~~~~~i~~~~ 78 (817)
+.++|.|+.=|....+.+|-|++++ |.+...++..+.++|..++..+.+++-+ +.||.+.|.+.++..++..+.
T Consensus 42 lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~G~~~~~~~~~~i~~-~~~~~~~f~i~~~~~~~~~~~ 118 (372)
T PF00854_consen 42 LIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINIGSLFSPTLVPYIQQ-NYGWFLGFGIPAIGMLLALIV 118 (372)
T ss_dssp HHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHHHHHHHHHCCCHHHH-CS-HHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhhhhHhhcccchhhcc-ccchhhhhhHHHHHHHHHHHH
Confidence 5678999999999999999998763 5566778899999999999999999999 999999999987655554443
No 290
>KOG1479|consensus
Probab=84.90 E-value=66 Score=35.34 Aligned_cols=132 Identities=11% Similarity=0.068 Sum_probs=61.5
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
++-.++..++........+..+.+-.+.|..+..+.++ +-.......+...+...+.-.+.-|...|.. +..+-.
T Consensus 16 ~~~v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~---~~~~~~ 90 (406)
T KOG1479|consen 16 YNLVYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLR---TRVGYL 90 (406)
T ss_pred cccHHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 34456666777777777888888877766655444444 3333333444444444444444444333321 011111
Q ss_pred HHHHHhHHHHHHHHhhhc--cCCC----hhHHHHHHHHHHHHhhhccccccccccccCCCchhHH
Q psy11734 281 FATLGAVLPGVGALAASY--VGCN----TSMVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTI 339 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a 339 (817)
+......+ +..+.+.. .... ....++...+.+.+.+.......-...+.++|+....
T Consensus 91 l~~~~il~--i~~l~~~~v~~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~~P~~ytqav 153 (406)
T KOG1479|consen 91 LSLIAILF--IVTLDLALVKTDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGLFPSEYTQAV 153 (406)
T ss_pred HHHHHHHH--HHHHHHHhhccCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhcCCHHHHHHH
Confidence 11111111 11122222 1111 2333444444455555555555666677777765443
No 291
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=83.86 E-value=13 Score=38.01 Aligned_cols=159 Identities=16% Similarity=0.153 Sum_probs=77.8
Q ss_pred CchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChh-------------HHHHHHHHHHHHHHHHHHHH
Q psy11734 593 ETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVA-------------ENGVLSALPFLIMWLVSMSS 659 (817)
Q Consensus 593 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~-------------~~~~~~~~~~~~~~ig~~~~ 659 (817)
+....+.+|+|+.|...+.+...... .+..+.+.+.++....++. .......++..+..+|.+..
T Consensus 84 ~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~~i 161 (267)
T PF07672_consen 84 KPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPFTI 161 (267)
T ss_pred cchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhceee
Confidence 45678999999998877766554321 1222233444432222221 11223333334444555666
Q ss_pred HHHHhhhhcccccccchhhHHHHH----HHHHHHHHHHHHHHhhcCch----HHHHHHHHHHHHHHhhhhhhhhhhcccc
Q psy11734 660 SALADYLIVRDILSRTNVRKVFAT----LGAVLPGVGALAASYVGCNT----SMVAICFTIGMAFMGFCYASIRVNPIDL 731 (817)
Q Consensus 660 g~l~dr~g~~~~~~~~~~r~~~~~----~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 731 (817)
|..+...-+|+ ++.. .+.+...+..+.......+. ....+..++.+++.-...+..-....|.
T Consensus 162 g~~nkt~~kRk---------~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy 232 (267)
T PF07672_consen 162 GLWNKTNYKRK---------PFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEY 232 (267)
T ss_pred ccchhhhhhhh---------hHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Confidence 66655433332 2222 22333333333321222122 2222333334444334444444455553
Q ss_pred ---CCCchHHHHHHHHHHHHHHHhHHHHHHHHhh
Q psy11734 732 ---SPNFSGTIMALSNGLGCVSGMVAPLTVGFLT 762 (817)
Q Consensus 732 ---~~~~~g~~~g~~~~~~~~g~~i~p~~~g~~~ 762 (817)
.|+..|.-.|+.-.++++.-.+.-.+...+.
T Consensus 233 K~~~pk~ig~~Fg~iWGfGY~~yTi~~Ii~S~i~ 266 (267)
T PF07672_consen 233 KGYNPKKIGIQFGLIWGFGYIFYTIYDIILSVIA 266 (267)
T ss_pred cCCCcceehhHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3677899899888888887766666655444
No 292
>KOG4332|consensus
Probab=83.17 E-value=16 Score=37.25 Aligned_cols=41 Identities=20% Similarity=0.089 Sum_probs=34.7
Q ss_pred HHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCc
Q psy11734 231 SEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDI 271 (817)
Q Consensus 231 ~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~ 271 (817)
-+.||+...+.|.+........++...+.|.++||-|||+-
T Consensus 64 YstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKra 104 (454)
T KOG4332|consen 64 YSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRA 104 (454)
T ss_pred ehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccc
Confidence 34589999999988887777778888899999999999984
No 293
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=81.82 E-value=73 Score=35.85 Aligned_cols=174 Identities=9% Similarity=0.099 Sum_probs=95.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhC---CChhHHHHHHHHHHH-HHHHHHHHHHHHHhhhhcccccccchhh
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIG---LSVAENGVLSALPFL-IMWLVSMSSSALADYLIVRDILSRTNVR 678 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g---~s~~~~~~~~~~~~~-~~~ig~~~~g~l~dr~g~~~~~~~~~~r 678 (817)
|.+..+.+..+|....+. .---++|.+. .+++.+.++-...-+ .+.+..++..++.++..+.++..
T Consensus 27 ~kflpl~Ll~f~I~~ny~-----~lR~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~----- 96 (509)
T COG3202 27 KKFLPLALLFFCILFNYN-----LLRSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFY----- 96 (509)
T ss_pred HHHHHHHHHHHHHHHHHH-----HHHHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHH-----
Confidence 445555555544443333 2233444433 345555555555444 56667777788887777665431
Q ss_pred HHHHHHHHHHHHHHHHHHHhh--------cCc-----------h------------HHHHHHHHHHHHHHhhhhh-hhhh
Q psy11734 679 KVFATLGAVLPGVGALAASYV--------GCN-----------T------------SMVAICFTIGMAFMGFCYA-SIRV 726 (817)
Q Consensus 679 ~~~~~~~~~~~~~~~~~~~~~--------~~~-----------~------------~~~~~~~~~~~~~~~~~~~-~~~~ 726 (817)
...+.+. .+++++++. +++ + |........+-.......+ ..+.
T Consensus 97 ---~~~~~F~--~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~ 171 (509)
T COG3202 97 ---IILGFFL--GFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQ 171 (509)
T ss_pred ---HHHHHHH--HHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1122221 222222211 111 1 3344444445444455455 5567
Q ss_pred hccccCC-CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCCcc-------ccHHHHHHHHHHHHHHHHHHHHHh
Q psy11734 727 NPIDLSP-NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNKTL-------LEWRVVFWIMFLTLFISNVFFVLF 791 (817)
Q Consensus 727 ~~~~~~~-~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~g~-------~~~~~~~~~~~~~~~i~~~~~~~~ 791 (817)
.+.|+.. ++..+-.++.+...+++..++..+..++.++... ...+..+.+.++...++++...+.
T Consensus 172 faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~ 244 (509)
T COG3202 172 FANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYI 244 (509)
T ss_pred HHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888887 8899999999999999999999998888775310 012334444455545555555444
No 294
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=78.86 E-value=65 Score=36.22 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhhhhhhhhhhccccCCCchHHHHH
Q psy11734 708 ICFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMA 741 (817)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 741 (817)
....+.+.+.+...+..........|+..+..+.
T Consensus 111 ~~v~~~g~~~~~~q~s~~gla~~fp~~~~~a~~~ 144 (437)
T TIGR00939 111 ASVVIINSGMALLQGSLFGLAGVFPSTYSSAVMS 144 (437)
T ss_pred HHHHHHHhhhhhhcccchhhcccCCHHHHHHHHh
Confidence 3334445555555555556666555455443333
No 295
>KOG3097|consensus
Probab=74.49 E-value=63 Score=34.33 Aligned_cols=56 Identities=16% Similarity=0.175 Sum_probs=42.8
Q ss_pred HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcc
Q psy11734 533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGED 591 (817)
Q Consensus 533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~ 591 (817)
..+.++++.+.+..++|.|+++.+++..+....... +-+ .++.++-...+.|+|.+
T Consensus 70 ~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~N-l~p--r~~tlVPa~~~~G~aa~ 125 (390)
T KOG3097|consen 70 SLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAAN-LEP--RYETLVPAGLVLGMAAG 125 (390)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhh-cch--hHHhhccHHHhhccccc
Confidence 334455555589999999999999988877654333 234 78889999999999998
No 296
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=71.74 E-value=1e+02 Score=30.00 Aligned_cols=132 Identities=10% Similarity=0.072 Sum_probs=73.5
Q ss_pred HHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhhhcccCchhHHhhcCHhHHHH
Q psy11734 529 AFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGVGEDLETPWAAILSSLPVWSL 608 (817)
Q Consensus 529 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gig~~~~~~~~~~l~~~~~~~~ 608 (817)
...+...++.++.=.+..|.++|-++.+..++.++...+.+. .|.....-.+.|+=+- -..+.-+.++....
T Consensus 36 ~~~i~ali~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~G~-----~~~~~~~~iv~gliAE---lI~~~g~y~~~~~~ 107 (186)
T PF09605_consen 36 MPAIAALICGIVYMLMVAKVPKRGAFLIMGIIMGLIFFLMGH-----GWPMLIVCIVGGLIAE---LILKKGGYKSKKRN 107 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHH---HHHHhCCCCcHHHH
Confidence 445556677888888999999999998888888777655543 2444444444443211 00111122333444
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHHH--------HhCCChhHHH--------HHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy11734 609 IISEVGHDYGFYLISSDLPKYMSQ--------VIGLSVAENG--------VLSALPFLIMWLVSMSSSALADYLIVRD 670 (817)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~p~~l~~--------~~g~s~~~~~--------~~~~~~~~~~~ig~~~~g~l~dr~g~~~ 670 (817)
.+++.+++.... ..+.|.++.. ..+.+++... .......+..+++.++++++..|+-||.
T Consensus 108 ~iay~vf~~~~~--g~~~p~~~~~~~y~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~v~a~lG~~lG~kllkKH 183 (186)
T PF09605_consen 108 TIAYAVFSLGYM--GPYLPIWFMRDAYLAAMIAKGMGAEYADTMISFFTPWMLIIIIIITFVGALLGALLGKKLLKKH 183 (186)
T ss_pred HHHHHHHHHHHH--hhHHHHHHhHHHHHHHHHHcCCCHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 444544444433 3444443321 1355554322 2333445666777788888888877764
No 297
>KOG4830|consensus
Probab=67.77 E-value=1.1 Score=44.98 Aligned_cols=144 Identities=10% Similarity=0.186 Sum_probs=82.6
Q ss_pred cccCChhhHHHHHHHHHHHHHHhhhhchhh---------ccccCchHHH-HHHHHHHHH-HHHHHH--------Hhh--h
Q psy11734 515 KFDWDERTQGVILSAFYYGYILTHIPGGIL---------SQKFGGKHTL-GLGFLSTAI-FTLLTP--------LIA--H 573 (817)
Q Consensus 515 ~~~~s~~~~g~~~s~~~~~~~i~~~~~G~l---------~Dr~Grr~~l-~~~l~~~~i-~~~l~~--------~a~--~ 573 (817)
+.+.++.....+.-+-...-++..|+.|.. .||+|||+.. .++.++.++ .....+ .+. -
T Consensus 46 qiglsp~~~AmlML~GQVtda~st~ftGi~~d~nll~~~idr~G~~~~wh~~gt~lVslSf~~ifg~a~iF~~~~~~s~v 125 (412)
T KOG4830|consen 46 QIGLSPSSRAMLMLIGQVTDAISTPFTGIFSDSNLLPACIDRIGRRMSWHLIGTVLVSLSFPMIFGFAKIFLCKSTTSEV 125 (412)
T ss_pred HhcCCcchhHHHHHhhHHHHHHhcccccccccccccHHHhhhhcceeeeeecccEEEEEechhhcCceeEEeeccHHHHH
Confidence 557777777777777778888888888743 4799999853 222222111 111111 111 0
Q ss_pred cchHHHHHHHHHHhhhcc----------------------------------------------cCchhHHhhcCHhHHH
Q psy11734 574 SGPVSMTVLRFLEGVGED----------------------------------------------LETPWAAILSSLPVWS 607 (817)
Q Consensus 574 ~s~~~l~~~R~l~Gig~~----------------------------------------------~~~~~~~~l~~~~~~~ 607 (817)
.+.....+.-.+-|++.+ .+.+|..-+++-.+.-
T Consensus 126 anlglyaialvVFgv~~A~~ke~tea~~R~~~~~~v~lG~~~~~vF~~~TrEP~~~~~~~~s~~~Rm~W~~WF~~v~~YQ 205 (412)
T KOG4830|consen 126 ANLGLYAIALVVFGVGWASVKESTEALIRLAGWLVVVLGITVAFVFYAFTREPTNSFSSDASELVRMHWTSWFGHVQFYQ 205 (412)
T ss_pred HHhHHHHHHhheeeeeeecccccHHHHHHHhhhheeeeceeEEEEEeecccCcccccCcchhhhhcccchhhhhhhHHHH
Confidence 133344555555666666 1112223344455555
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHH
Q psy11734 608 LIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMS 658 (817)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~ 658 (817)
+.+.++..-.....-..|+|.|..+.++++..-.+++-.+.++.....+.+
T Consensus 206 iAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v 256 (412)
T KOG4830|consen 206 IALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMV 256 (412)
T ss_pred HHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhh
Confidence 555666655555666677888877777777776676666666655555443
No 298
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=66.27 E-value=1.7e+02 Score=30.42 Aligned_cols=70 Identities=10% Similarity=-0.093 Sum_probs=44.5
Q ss_pred cCchhHHhhcCHhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHH-HHHHHHHHHHHHHHHHhhhhccc
Q psy11734 592 LETPWAAILSSLPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSAL-PFLIMWLVSMSSSALADYLIVRD 670 (817)
Q Consensus 592 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~-~~~~~~ig~~~~g~l~dr~g~~~ 670 (817)
.+...+++.|+|+.+.............+....|.|. |-..-++++-+.+ +-+-..+|+++ +-||+.|-.
T Consensus 58 ~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn------~g~~leaSLGY~InPL~~VllG~lf---lkErls~~Q 128 (293)
T COG2962 58 QWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN------NGHVLEASLGYFINPLVNVLLGRLF---LKERLSRLQ 128 (293)
T ss_pred hhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC------CCchhHHHhHHHHHHHHHHHHHHHH---HHhhccHHH
Confidence 4455678899999888888887777788888777775 2233344433333 33444455555 567776544
No 299
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=64.72 E-value=1.8 Score=46.29 Aligned_cols=52 Identities=10% Similarity=0.012 Sum_probs=1.5
Q ss_pred HHHHHHHHHHhhhcccccccc-ccccCCCchhHHHHHHHhhhhhccccccccc
Q psy11734 307 AIFFTIGMAFMGFCYASIRVN-PIDLSPNFSGTIMALSNGLGCVSGMVAPLTV 358 (817)
Q Consensus 307 ~~~~~l~~~~~g~~~~~~~~~-~~~~~p~~~g~a~g~~~~~~~lg~~~~~~i~ 358 (817)
++...+.+.-+|...+....+ ...+.|++|-.+..+.++.-.+|-.+|..+.
T Consensus 252 ~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls 304 (309)
T PF01733_consen 252 IILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLS 304 (309)
T ss_dssp ---------------HHHH----------------------------------
T ss_pred HHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444444433333 3345577787777777777777777666553
No 300
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=59.91 E-value=30 Score=39.91 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=35.5
Q ss_pred HHHhhchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhh
Q psy11734 197 AAILYSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIA 268 (817)
Q Consensus 197 ~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~ 268 (817)
.++||.|+- ...++.++..+....+.......+...--+++...|.+....-+.-++++.++|+.+-|.-+
T Consensus 252 gDVFR~P~~-~~lls~lvG~G~Qll~~~~~~~~~a~~g~~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~~yk 322 (521)
T PF02990_consen 252 GDVFRPPKH-PMLLSALVGTGIQLLFMALVTLFFAALGFLSPNNRGSLLTAAIILYALTSFIAGYVSARLYK 322 (521)
T ss_pred HHHhcCcCC-chHHHhHhcchhhhhHHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 478887763 22222233233333333333333333223466656666665555666666666666666543
No 301
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=53.80 E-value=45 Score=28.75 Aligned_cols=32 Identities=19% Similarity=0.313 Sum_probs=28.8
Q ss_pred CchHHHHHHHHHHHHHHHhHHHHHHHHhhcCC
Q psy11734 734 NFSGTIMALSNGLGCVSGMVAPLTVGFLTQNK 765 (817)
Q Consensus 734 ~~~g~~~g~~~~~~~~g~~i~p~~~g~~~~~~ 765 (817)
+.++.+.++-...-.+++.+.....|++.|++
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~ 69 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKF 69 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56889999999999999999999999999987
No 302
>KOG2601|consensus
Probab=50.68 E-value=3.7e+02 Score=29.41 Aligned_cols=172 Identities=11% Similarity=0.094 Sum_probs=82.7
Q ss_pred HhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccchhhHHHH
Q psy11734 603 LPVWSLIISEVGHDYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVRDILSRTNVRKVFA 682 (817)
Q Consensus 603 ~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~ 682 (817)
+..+.+..+++...++-=.-..-...|+.+-.|=|....+..-.+-....++-....|...|+..|++++ |+++.
T Consensus 27 ~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi-----~~~L~ 101 (503)
T KOG2601|consen 27 STVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVI-----QTWLL 101 (503)
T ss_pred ceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHH-----HHHHh
Confidence 3344444555554444332233344455553333344455555555566666677788889999998875 44433
Q ss_pred H--HHHHHHHHHHHHHHhhc-----CchHHHHHHHHHHHHHHhh--hhhhhhhhcc--c----c-CCCchHHHH---HHH
Q psy11734 683 T--LGAVLPGVGALAASYVG-----CNTSMVAICFTIGMAFMGF--CYASIRVNPI--D----L-SPNFSGTIM---ALS 743 (817)
Q Consensus 683 ~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--~----~-~~~~~g~~~---g~~ 743 (817)
. .+..+++..++.+.... +.++ ...+..+....... .......+.- | + ..+.++..+ +..
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv-~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnati 180 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPV-FTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATI 180 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccH-HHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhh
Confidence 3 23333222222222221 2232 22222222222111 1111111111 1 1 124455555 555
Q ss_pred HHHHHHHHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHH
Q psy11734 744 NGLGCVSGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFI 783 (817)
Q Consensus 744 ~~~~~~g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i 783 (817)
-...+.-..++|.+.|.+.+..+ -+......++-..+
T Consensus 181 r~iDq~tn~Lapv~tg~Iitfvs---l~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 181 RGIDQSTNLLAPVITGLIITFVS---LRASAGTFAAWALV 217 (503)
T ss_pred hhhhhhhhchhhhhhcccceeec---hhhhhhhhHHHHHH
Confidence 55666788999999999988764 34433334444443
No 303
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=44.85 E-value=3.1e+02 Score=26.77 Aligned_cols=55 Identities=11% Similarity=-0.024 Sum_probs=39.0
Q ss_pred HHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHhh
Q psy11734 529 AFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIAHSGPVSMTVLRFLEGV 588 (817)
Q Consensus 529 ~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~~~s~~~l~~~R~l~Gi 588 (817)
...+...++.++.=.+..|.+++-++.+..++.++...+. . +.|.....-++.|+
T Consensus 38 ~p~i~al~~g~vyml~~~KV~K~G~~~i~~~i~gl~~~~~---G--~~~~~~~~~ii~gl 92 (189)
T TIGR02185 38 SPGITAFLVGIIFFLMVAKVPKRGVIFIFGILLGLLFFLM---G--MYWPMIISSIIGGL 92 (189)
T ss_pred HHHHHHHHHhHHHhhhhhhcCCccHHHHHHHHHHHHHHHH---c--ccHHHHHHHHHHHH
Confidence 3556666788888889999999999888888777754433 3 45555555566664
No 304
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=41.11 E-value=2.2e+02 Score=31.14 Aligned_cols=47 Identities=11% Similarity=-0.010 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHHHHHHHhh
Q psy11734 649 FLIMWLVSMSSSALADYLIVRDILSRTNVRKVFATLGAVLPGVGALAASYV 699 (817)
Q Consensus 649 ~~~~~ig~~~~g~l~dr~g~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 699 (817)
.+..++.....|++..|.+- +. .+.++.+.-..+-+...++++-...
T Consensus 5 ~i~~i~~ii~~G~~~~~~~~---l~-~~~~~~ls~lv~~~~lP~liF~~i~ 51 (385)
T PF03547_consen 5 AILPIFLIILLGYLLGRFGI---LD-PEASKGLSKLVFNVFLPALIFSSIA 51 (385)
T ss_pred HHHHHHHHHHHHHHHHHhCC---CC-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666777888877642 21 2334444444444444444444433
No 305
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=34.79 E-value=7.4e+02 Score=28.30 Aligned_cols=144 Identities=14% Similarity=0.071 Sum_probs=77.9
Q ss_pred ChhhHHHHHH-HHHHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchHH--HHHHHHHHhhhcccC
Q psy11734 519 DERTQGVILS-AFYYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPVS--MTVLRFLEGVGEDLE 593 (817)
Q Consensus 519 s~~~~g~~~s-~~~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~~--l~~~R~l~Gig~~~~ 593 (817)
++.....+=. ...-+..+......+++||++|++++-+.+..+...-.+.++.- +.+.-+ -...+...- ..
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~----~~ 131 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAI----LP 131 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhh----cc
Confidence 3444444433 33335566778899999999999999888888877777777652 000000 000010000 00
Q ss_pred chhHHhhcCHhHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy11734 594 TPWAAILSSLPVWSLIISEVGH-DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIV 668 (817)
Q Consensus 594 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~ 668 (817)
..++..+.--+-|...+.+... .++...+....=.+.++ -.+..|+.-++.++++++-+|.+++|.+...+.+
T Consensus 132 ~~~~~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~--itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~ 205 (491)
T PF03219_consen 132 PGFKGFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANE--ITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSS 205 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111122222222211 11111111111123333 4678899999999999999999999999888877
No 306
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=34.71 E-value=7.3e+02 Score=28.21 Aligned_cols=146 Identities=11% Similarity=-0.000 Sum_probs=86.7
Q ss_pred ChhhHHHHHHHHHH-HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHHhh--hcchH--HHHHHHHHHhhhcccC
Q psy11734 519 DERTQGVILSAFYY-GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPLIA--HSGPV--SMTVLRFLEGVGEDLE 593 (817)
Q Consensus 519 s~~~~g~~~s~~~~-~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~a~--~~s~~--~l~~~R~l~Gig~~~~ 593 (817)
++.....+=+-.-. +..+..++.+++.+++.+++++-+-+..+...-+++++.- ..... .....|=+++..-...
T Consensus 59 gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l 138 (509)
T COG3202 59 GAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFL 138 (509)
T ss_pred cchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccc
Confidence 45556666665555 6778899999999999999999999999999999998874 00000 0222222222110000
Q ss_pred chhHHhhcCHhHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcc
Q psy11734 594 TPWAAILSSLPVWSLIISEVGH-DYGFYLISSDLPKYMSQVIGLSVAENGVLSALPFLIMWLVSMSSSALADYLIVR 669 (817)
Q Consensus 594 ~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~g~~ 669 (817)
..+-.++++ |...+.+.+. .++...+....=.+.++. .+..|+.-+..++++++-++.+++|.+...+.++
T Consensus 139 ~~~ili~~~---Ws~s~~Yi~aELWgslV~S~lFw~faNei--tt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~ 210 (509)
T COG3202 139 KWFILIVGE---WSYSLFYIMAELWGSLVLSLLFWQFANEI--TTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKH 210 (509)
T ss_pred eeeeEeecc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 000011112 3333333222 122222222222233332 5678899999999999999999999998888874
No 307
>PRK15097 cytochrome d terminal oxidase subunit 1; Provisional
Probab=34.32 E-value=7.6e+02 Score=28.28 Aligned_cols=35 Identities=17% Similarity=0.018 Sum_probs=22.6
Q ss_pred HHHHhhhhchhhccccCchHHHHHHHHHHHHHHHHHHH
Q psy11734 533 GYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTLLTPL 570 (817)
Q Consensus 533 ~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~l~~~ 570 (817)
+..++-.++|+ ||++ |+.=..+..+.++++.++++
T Consensus 108 stFlGl~~FGW--~rl~-~~~H~~~~~lVaiGt~lSA~ 142 (522)
T PRK15097 108 STFVGLFFFGW--DRLG-KVQHMCVTWLVALGSNLSAL 142 (522)
T ss_pred HHHHHHHHHhh--hhcc-hHHHHHHHHHHHHHHHHHHH
Confidence 33455556666 9998 55656666666777777654
No 308
>KOG2601|consensus
Probab=32.87 E-value=1.5e+02 Score=32.22 Aligned_cols=162 Identities=13% Similarity=0.086 Sum_probs=86.2
Q ss_pred hchhHHHHHHHHHHHHHHHHHHhhchhhHHHHhhCCcccccchhhhhhHHHHHHHHhhhHHHHHHHhhcCcccchhhHHH
Q psy11734 201 YSLPVWSLIISEVGHDYGLYLISTDLPKYMSEVIGLSVAENGVLSALPFLIMWLVSMSSSALADFFIARDILSRTNVRKV 280 (817)
Q Consensus 201 ~~~~~~~~~i~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ag~~~~~~~i~~~ig~~~~G~l~dk~g~r~~~~~~~~~~~ 280 (817)
.++..+.....++...++-=+--+-...|+.+..|-|-...+.....-+...++-..+.|-..||..|.|... ...+
T Consensus 25 ls~~~i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~---~~L~ 101 (503)
T KOG2601|consen 25 LSSTVIFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQ---TWLL 101 (503)
T ss_pred ccceeehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHH---HHHh
Confidence 3344455556666665555555555666777666656666777777777888888889999999999987621 1112
Q ss_pred HHHHHhHHHHHHHHhhhccC-----C-ChhHHHHHHHHHHHHhhhccc--cc-------cccc-cccCCCchhHHHHHHH
Q psy11734 281 FATLGAVLPGVGALAASYVG-----C-NTSMVAIFFTIGMAFMGFCYA--SI-------RVNP-IDLSPNFSGTIMALSN 344 (817)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~l~~~~~g~~~~--~~-------~~~~-~~~~p~~~g~a~g~~~ 344 (817)
+--++..+++.....+.... . ++....+.++...+..+--.. .. .+.+ ++-+|.....-.+..-
T Consensus 102 lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir 181 (503)
T KOG2601|consen 102 LQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIR 181 (503)
T ss_pred hccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhh
Confidence 22233333333222222222 1 122222222222222211111 11 1222 2223334444446666
Q ss_pred hhhhhcccccccccceecccc
Q psy11734 345 GLGCVSGMVAPLTVGFLTQNI 365 (817)
Q Consensus 345 ~~~~lg~~~~~~i~g~l~~~~ 365 (817)
..-+.-..++|.+.|.+.+..
T Consensus 182 ~iDq~tn~Lapv~tg~Iitfv 202 (503)
T KOG2601|consen 182 GIDQSTNLLAPVITGLIITFV 202 (503)
T ss_pred hhhhhhhchhhhhhcccceee
Confidence 666678889999999888764
No 309
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=30.82 E-value=6.4e+02 Score=26.36 Aligned_cols=35 Identities=11% Similarity=-0.068 Sum_probs=18.6
Q ss_pred hCCChhHHHHHHHHHHHHH-HHHHHHHHHHHhhhhcccc
Q psy11734 634 IGLSVAENGVLSALPFLIM-WLVSMSSSALADYLIVRDI 671 (817)
Q Consensus 634 ~g~s~~~~~~~~~~~~~~~-~ig~~~~g~l~dr~g~~~~ 671 (817)
.+.+...++.+.....+.. .++.++ +-||.+++++
T Consensus 95 ~~~~~~~a~~l~~~~Pi~v~l~~~~~---l~E~~~~~~~ 130 (296)
T PRK15430 95 NNHHMLEASLGYFINPLVNIVLGMIF---LGERFRRMQW 130 (296)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHH---hcCCCcHHHH
Confidence 3566666665554444333 333333 3577777654
No 310
>PF09605 Trep_Strep: Hypothetical bacterial integral membrane protein (Trep_Strep); InterPro: IPR011733 This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae (strain ATCC BAA-255 / R6).
Probab=30.14 E-value=1.5e+02 Score=28.79 Aligned_cols=28 Identities=7% Similarity=0.217 Sum_probs=20.3
Q ss_pred hhhhhhHHHHHHHHhhhHHHHHHHhhcC
Q psy11734 243 VLSALPFLIMWLVSMSSSALADFFIARD 270 (817)
Q Consensus 243 ~~~~~~~i~~~ig~~~~G~l~dk~g~r~ 270 (817)
.......+..++++++++++..|.-+|+
T Consensus 156 ~~~~~~~~~~~v~a~lG~~lG~kllkKH 183 (186)
T PF09605_consen 156 WMLIIIIIITFVGALLGALLGKKLLKKH 183 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4444555677788888888888887775
No 311
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=29.99 E-value=1.8e+02 Score=27.29 Aligned_cols=28 Identities=11% Similarity=0.104 Sum_probs=20.8
Q ss_pred hhccccCCCchHHHHHHHHHHHHHHHhH
Q psy11734 726 VNPIDLSPNFSGTIMALSNGLGCVSGMV 753 (817)
Q Consensus 726 ~~~~~~~~~~~g~~~g~~~~~~~~g~~i 753 (817)
++.+.-.|+..|+..|.-.+-.+++-+.
T Consensus 118 ilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 118 ILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred hcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 4555666788999999988887776543
No 312
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=28.51 E-value=1.6e+02 Score=24.00 Aligned_cols=34 Identities=18% Similarity=0.402 Sum_probs=21.6
Q ss_pred HHhHHHHHHHHhhcCCccccHHHHHHHHHHHHHHHHHHH
Q psy11734 750 SGMVAPLTVGFLTQNKTLLEWRVVFWIMFLTLFISNVFF 788 (817)
Q Consensus 750 g~~i~p~~~g~~~~~~g~~~~~~~~~~~~~~~~i~~~~~ 788 (817)
.+++.+.+.|+..++ ++..+++.++..+++++++
T Consensus 19 ~~~iisfi~Gy~~q~-----~~~~~~~~~~g~~~~~lv~ 52 (76)
T PF06645_consen 19 ISAIISFIVGYITQS-----FSYTFYIYGAGVVLTLLVV 52 (76)
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHhhe
Confidence 455566777888777 4566666666666655554
No 313
>TIGR02185 Trep_Strep conserved hypothetical integral membrane protein TIGR02185. This family consists of strongly hydrophobic proteins about 190 amino acids in length with a strongly basic motif near the C-terminus. If is found in rather few species, but in paralogous families of 12 members in the oral pathogenic spirochaete Treponema denticola and 2 in Streptococcus pneumoniae R6.
Probab=26.01 E-value=2.9e+02 Score=26.92 Aligned_cols=26 Identities=0% Similarity=0.195 Sum_probs=17.5
Q ss_pred hhhhHHHHHHHHhhhHHHHHHHhhcC
Q psy11734 245 SALPFLIMWLVSMSSSALADFFIARD 270 (817)
Q Consensus 245 ~~~~~i~~~ig~~~~G~l~dk~g~r~ 270 (817)
.....+..++++++++.+..|+-||+
T Consensus 161 ~~~~~~~t~v~~~iG~~iG~kllkKH 186 (189)
T TIGR02185 161 AVIMIVLTAVAGIAGVLIGKKLLKKH 186 (189)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33445566777777888877776665
No 314
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=25.10 E-value=6.9e+02 Score=24.94 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=13.7
Q ss_pred CchhHHHHHHHHH-HHHHHHhhhhhccEEEEe
Q psy11734 446 LPARYVLGIMGCM-GVTLALMMRSCLATAITE 476 (817)
Q Consensus 446 ~~~~~~il~~~~~-~~~~~~~~~~~~~~~~~~ 476 (817)
.+.+|......++ ..+...+-...-++..++
T Consensus 122 ~~~~~~~~~~g~~~~G~~~G~~g~ggg~~~~~ 153 (240)
T PF01925_consen 122 PPKRWLLFLLGGLFIGFLSGLFGIGGGPLLVP 153 (240)
T ss_pred ccchhhhhhhhHHHhhHHHhhhhccccccccc
Confidence 3344444443333 555555544444444433
No 315
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=24.22 E-value=5.6e+02 Score=26.34 Aligned_cols=22 Identities=14% Similarity=-0.108 Sum_probs=14.1
Q ss_pred HHHHHHHHHHHhhchhhHHHHh
Q psy11734 212 EVGHDYGLYLISTDLPKYMSEV 233 (817)
Q Consensus 212 ~~~~~~~~~~~~~~~p~~l~~~ 233 (817)
..+..+.+|+..+.=..|.++.
T Consensus 187 LAv~aGvlyGs~fvPv~Yi~~~ 208 (254)
T PF07857_consen 187 LAVFAGVLYGSNFVPVIYIQDH 208 (254)
T ss_pred HHHHHHHHHhcccchHHHHHhC
Confidence 3344577888877666666664
No 316
>COG2119 Predicted membrane protein [Function unknown]
Probab=23.84 E-value=4e+02 Score=25.78 Aligned_cols=36 Identities=19% Similarity=0.236 Sum_probs=27.1
Q ss_pred HHHHHHhhhhchhhccccCchHHHHHHHHHHHHHHH
Q psy11734 531 YYGYILTHIPGGILSQKFGGKHTLGLGFLSTAIFTL 566 (817)
Q Consensus 531 ~~~~~i~~~~~G~l~Dr~Grr~~l~~~l~~~~i~~~ 566 (817)
.++..++-..+.++++|+..|++-.++-+++.+..+
T Consensus 144 ~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 144 ILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 455667777888999999999998777666655543
No 317
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=23.30 E-value=1.1e+02 Score=28.58 Aligned_cols=46 Identities=9% Similarity=0.094 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhhhccccccccccccCCCchhHHHHHHHhhhhhc
Q psy11734 305 MVAIFFTIGMAFMGFCYASIRVNPIDLSPNFSGTIMALSNGLGCVS 350 (817)
Q Consensus 305 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~g~a~g~~~~~~~lg 350 (817)
++........|+.+...-.+-+.....+|+..|+..|+-++-.+++
T Consensus 97 ~~~~~~S~~~Fg~gllGisYGilSaSWD~~r~GSllG~~e~~~N~~ 142 (153)
T PF11947_consen 97 WAVLLVSLVFFGLGLLGISYGILSASWDPEREGSLLGWEEFKRNWG 142 (153)
T ss_pred hHHHHHHHHHHHHHHHhhhhhhcccccCCCCCCCcccHHHHHHhHH
Confidence 3333333334444444444456666788888999999888877754
No 318
>PRK15035 cytochrome bd-II oxidase subunit 1; Provisional
Probab=20.77 E-value=1.3e+03 Score=26.45 Aligned_cols=24 Identities=25% Similarity=0.068 Sum_probs=17.0
Q ss_pred cccCchHHHHHHHHHHHHHHHHHHH
Q psy11734 546 QKFGGKHTLGLGFLSTAIFTLLTPL 570 (817)
Q Consensus 546 Dr~Grr~~l~~~l~~~~i~~~l~~~ 570 (817)
||.+ |++=..+..+.++++.++++
T Consensus 119 ~rl~-~~~H~~~~~lVaiGt~lSA~ 142 (514)
T PRK15035 119 QRLN-KYQHLLVTWLVAFGSNLSAL 142 (514)
T ss_pred hhcc-hHHHHHHHHHHHHHHHHHHH
Confidence 8998 55666666677777777654
No 319
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=20.27 E-value=9.6e+02 Score=25.10 Aligned_cols=35 Identities=3% Similarity=-0.287 Sum_probs=27.8
Q ss_pred CchHHHHhhchhHHHHHHHHHHHHHHHHHHhhchh
Q psy11734 193 KTPWAAILYSLPVWSLIISEVGHDYGLYLISTDLP 227 (817)
Q Consensus 193 ~~~~~~l~~~~~~~~~~i~~~~~~~~~~~~~~~~p 227 (817)
....+++.|+|+.+.............+....|.|
T Consensus 59 ~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv 93 (293)
T COG2962 59 WRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV 93 (293)
T ss_pred hHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec
Confidence 44467799999988888888877788888888877
Done!