Your job contains 1 sequence.
>psy11738
MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA
THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE
TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF
LEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQCFEITDMPWYQ
RKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEM
TKNYPAVQEATKLLEKAKSYLKK
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11738
(323 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1RXD4 - symbol:FAM82B "Uncharacterized protein... 486 2.3e-46 1
UNIPROTKB|Q96DB5 - symbol:RMDN1 "Regulator of microtubule... 483 4.8e-46 1
UNIPROTKB|Q32KL4 - symbol:RMDN1 "Regulator of microtubule... 482 6.2e-46 1
RGD|1563085 - symbol:Rmdn1 "regulator of microtubule dyna... 477 2.1e-45 1
MGI|MGI:1913552 - symbol:Rmdn1 "regulator of microtubule ... 471 9.1e-45 1
ZFIN|ZDB-GENE-070928-17 - symbol:zgc:171674 "zgc:171674" ... 464 5.0e-44 1
UNIPROTKB|F1NBF8 - symbol:FAM82B "Uncharacterized protein... 443 8.4e-42 1
UNIPROTKB|E5RH53 - symbol:RMDN1 "Regulator of microtubule... 414 9.9e-39 1
UNIPROTKB|H0YB83 - symbol:RMDN1 "Regulator of microtubule... 371 3.6e-34 1
DICTYBASE|DDB_G0278793 - symbol:DDB_G0278793 "Regulator o... 366 1.2e-33 1
UNIPROTKB|H0YB03 - symbol:RMDN1 "Regulator of microtubule... 329 1.0e-29 1
WB|WBGene00009369 - symbol:F33H2.6 species:6239 "Caenorha... 324 3.4e-29 1
RGD|1308697 - symbol:Rmdn3 "regulator of microtubule dyna... 286 9.1e-25 1
MGI|MGI:1915059 - symbol:Rmdn3 "regulator of microtubule ... 271 4.3e-23 1
UNIPROTKB|F1P0I6 - symbol:FAM82A2 "Uncharacterized protei... 268 1.0e-22 1
UNIPROTKB|Q2TBQ7 - symbol:RMDN2 "Regulator of microtubule... 252 3.0e-21 1
UNIPROTKB|Q5R6Z1 - symbol:RMDN3 "Regulator of microtubule... 252 5.6e-21 1
UNIPROTKB|H0YMB1 - symbol:RMDN3 "Regulator of microtubule... 245 8.0e-21 1
UNIPROTKB|Q96TC7 - symbol:RMDN3 "Regulator of microtubule... 250 9.3e-21 1
UNIPROTKB|Q1JQC5 - symbol:RMDN3 "Regulator of microtubule... 247 2.0e-20 1
UNIPROTKB|F1SSS8 - symbol:FAM82A2 "Uncharacterized protei... 241 9.3e-20 1
RGD|1559836 - symbol:Rmdn2 "regulator of microtubule dyna... 232 4.5e-18 1
UNIPROTKB|Q96LZ7 - symbol:RMDN2 "Regulator of microtubule... 229 1.4e-17 1
WB|WBGene00011501 - symbol:rmd-1 species:6239 "Caenorhabd... 201 5.6e-16 1
WB|WBGene00007786 - symbol:rmd-2 species:6239 "Caenorhabd... 188 2.2e-12 1
UNIPROTKB|E5RGC8 - symbol:RMDN1 "Regulator of microtubule... 92 0.00078 1
>UNIPROTKB|F1RXD4 [details] [associations]
symbol:FAM82B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005813 "centrosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] InterPro:IPR011990 GO:GO:0005739
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:NAYVIKE
EMBL:CU462951 Ensembl:ENSSSCT00000006729 Uniprot:F1RXD4
Length = 317
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 92/224 (41%), Positives = 145/224 (64%)
Query: 6 AAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSS 65
A V++V EE L+++D L+E + E++ ++L + ED E++WRL R ++A S +
Sbjct: 79 ATAKVTRV-EEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDIAQLSGT 137
Query: 66 LSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHH 125
S+ +KK L+ A AL ++E +A HKW A+ +++ EG KA+I IK H
Sbjct: 138 -SEEEKKLLVYEALEYAKRALEKNESSFAAHKWYAICISDVGDYEGIKAKIANAYIIKEH 196
Query: 126 MNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEK 185
KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F P+S+YEEAL YF AE+
Sbjct: 197 FEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQ 256
Query: 186 QHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
P FYS+N+L+LGKTY++L N + AA++L K+YP ++D+
Sbjct: 257 VDPNFYSKNLLLLGKTYLKLHNKKLAAFWLTKAKDYPAHTEEDK 300
Score = 236 (88.1 bits), Expect = 7.2e-20, P = 7.2e-20
Identities = 44/92 (47%), Positives = 63/92 (68%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F P+S+YEEAL YF AE+ P FYS+N+L+LGKTY++L
Sbjct: 218 CYTFAEMPWYQRRIAKMLFAAPPSSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLH 277
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K+YPA E K ++ + L
Sbjct: 278 NKKLAAFWLTKAKDYPAHTEEDKQVQTEAAQL 309
>UNIPROTKB|Q96DB5 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000922 "spindle
pole" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005739
GO:GO:0005813 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
CTD:51115 eggNOG:NOG70879 HOGENOM:HOG000256907 HOVERGEN:HBG080276
EMBL:AF151848 EMBL:BC009671 EMBL:BR000690 IPI:IPI00329696
RefSeq:NP_057117.2 UniGene:Hs.145386 ProteinModelPortal:Q96DB5
SMR:Q96DB5 IntAct:Q96DB5 STRING:Q96DB5 PhosphoSite:Q96DB5
DMDM:73620898 PaxDb:Q96DB5 PRIDE:Q96DB5 DNASU:51115
Ensembl:ENST00000406452 GeneID:51115 KEGG:hsa:51115 UCSC:uc003ydu.3
GeneCards:GC08M087484 HGNC:HGNC:24285 HPA:HPA026495 MIM:611871
neXtProt:NX_Q96DB5 PharmGKB:PA142671849 InParanoid:Q96DB5
OMA:NAYVIKE PhylomeDB:Q96DB5 ChiTaRS:FAM82B GenomeRNAi:51115
NextBio:53881 ArrayExpress:Q96DB5 Bgee:Q96DB5 CleanEx:HS_FAM82B
Genevestigator:Q96DB5 GermOnline:ENSG00000176623 Uniprot:Q96DB5
Length = 314
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 93/229 (40%), Positives = 146/229 (63%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L+++D L+E + E++ ++L + ED E++WRL R ++A
Sbjct: 71 ISQAAVVHATAKV-EEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVA 129
Query: 61 THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE 120
S + S+ +KK L+ A AL ++E +A HKW A+ L++ EG KA+I
Sbjct: 130 QLSRT-SEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAY 188
Query: 121 TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF 180
IK H KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F T P+S+YE+AL YF
Sbjct: 189 IIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYF 248
Query: 181 LEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
AE+ P FYS+N+L+LGKTY++L N + AA++L K+YP ++D+
Sbjct: 249 HRAEQVDPNFYSKNLLLLGKTYLKLHNKKLAAFWLMKAKDYPAHTEEDK 297
Score = 237 (88.5 bits), Expect = 5.7e-20, P = 5.7e-20
Identities = 44/92 (47%), Positives = 64/92 (69%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F T P+S+YE+AL YF AE+ P FYS+N+L+LGKTY++L
Sbjct: 215 CYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQVDPNFYSKNLLLLGKTYLKLH 274
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K+YPA E K ++ + L
Sbjct: 275 NKKLAAFWLMKAKDYPAHTEEDKQIQTEAAQL 306
>UNIPROTKB|Q32KL4 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9913 "Bos taurus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR011990 PROSITE:PS50005 PROSITE:PS50293 GO:GO:0005737
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 EMBL:BC110037
IPI:IPI00704781 RefSeq:NP_001032689.1 UniGene:Bt.55894
ProteinModelPortal:Q32KL4 PRIDE:Q32KL4 Ensembl:ENSBTAT00000020889
GeneID:513788 KEGG:bta:513788 CTD:51115 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 InParanoid:Q32KL4 OMA:KNESSCA OrthoDB:EOG46DM3V
NextBio:20871031 ArrayExpress:Q32KL4 Uniprot:Q32KL4
Length = 317
Score = 482 (174.7 bits), Expect = 6.2e-46, P = 6.2e-46
Identities = 93/224 (41%), Positives = 144/224 (64%)
Query: 6 AAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSS 65
AA V ++ EE L+++D L+E + E++ ++L + ED E++WRL R ++A S +
Sbjct: 79 AAAKVFEI-EEVLEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVAQLSGT 137
Query: 66 LSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHH 125
S+ +KK L+ A AL ++E A HKW A+ + + EG KA+I IK H
Sbjct: 138 -SEEEKKFLVYEALEYAKRALEKNESSCAAHKWYAICIGDVGDYEGIKAKIANAYIIKEH 196
Query: 126 MNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEK 185
KAIEL P D+T++ ++G+WC+ + +MPWYQR+IA +F T P S+YEEAL YF AE+
Sbjct: 197 FEKAIELNPKDATSIHLMGIWCYTVAEMPWYQRRIAKVLFATPPGSTYEEALGYFHRAEQ 256
Query: 186 QHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
P FYS+N+L+LGKTY++L N + AA++L K+YP ++D+
Sbjct: 257 VDPNFYSKNLLLLGKTYLKLHNKKLAAFWLTKAKDYPAHTEEDK 300
Score = 243 (90.6 bits), Expect = 1.3e-20, P = 1.3e-20
Identities = 45/92 (48%), Positives = 64/92 (69%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ + +MPWYQR+IA +F T P S+YEEAL YF AE+ P FYS+N+L+LGKTY++L
Sbjct: 218 CYTVAEMPWYQRRIAKVLFATPPGSTYEEALGYFHRAEQVDPNFYSKNLLLLGKTYLKLH 277
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K+YPA E K ++ + L
Sbjct: 278 NKKLAAFWLTKAKDYPAHTEEDKQIQTEAAQL 309
>RGD|1563085 [details] [associations]
symbol:Rmdn1 "regulator of microtubule dynamics 1" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005813
"centrosome" evidence=IEA;ISO] [GO:0005874 "microtubule"
evidence=IEA] InterPro:IPR001440 InterPro:IPR011990 Pfam:PF00515
PROSITE:PS50005 PROSITE:PS50293 RGD:1563085 GO:GO:0005739
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 CTD:51115
eggNOG:NOG70879 GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 OrthoDB:EOG46DM3V OMA:NAYVIKE EMBL:BC098713
IPI:IPI00369006 RefSeq:NP_001026833.1 UniGene:Rn.205878
ProteinModelPortal:Q4G069 PhosphoSite:Q4G069 PRIDE:Q4G069
Ensembl:ENSRNOT00000036050 GeneID:500419 KEGG:rno:500419
UCSC:RGD:1563085 InParanoid:Q4G069 NextBio:706151
Genevestigator:Q4G069 Uniprot:Q4G069
Length = 310
Score = 477 (173.0 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 91/229 (39%), Positives = 143/229 (62%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L+++D L+E + E++ ++L + EDVE++WRL R ++A
Sbjct: 71 ISQAAVVHATAKV-EEILEQADYLYESGETEKLYQLLTQYKESEDVELLWRLARASRDIA 129
Query: 61 THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE 120
+ S+ +KK L+ A AL + +A HKW A+ +++ EG K +I
Sbjct: 130 QLCKT-SEEEKKVLLYEALEYAKRALEKKGSSFAAHKWYAICISDVGDYEGIKVKIANAY 188
Query: 121 TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF 180
IK H KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F P+S+YEEALKYF
Sbjct: 189 VIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAEVLFANPPSSTYEEALKYF 248
Query: 181 LEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
AE+ P FYS+N+L+LGKTY++L N + AA++L K+YP ++D+
Sbjct: 249 HRAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKAKSYPAHTEEDK 297
Score = 244 (91.0 bits), Expect = 1.0e-20, P = 1.0e-20
Identities = 45/92 (48%), Positives = 64/92 (69%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F P+S+YEEALKYF AE+ P FYS+N+L+LGKTY++L
Sbjct: 215 CYTFAEMPWYQRRIAEVLFANPPSSTYEEALKYFHRAEEVDPNFYSKNLLLLGKTYLKLN 274
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K+YPA E K ++ + L
Sbjct: 275 NKKLAAFWLVKAKSYPAHTEEDKQIQTEAAQL 306
>MGI|MGI:1913552 [details] [associations]
symbol:Rmdn1 "regulator of microtubule dynamics 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001440
InterPro:IPR011990 Pfam:PF00515 PROSITE:PS50005 PROSITE:PS50293
MGI:MGI:1913552 GO:GO:0005739 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 CTD:51115 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 HOGENOM:HOG000256907
HOVERGEN:HBG080276 OrthoDB:EOG46DM3V OMA:NAYVIKE EMBL:AK002442
EMBL:AK010421 EMBL:AK029446 EMBL:AL683894 EMBL:BC025158
EMBL:BC096046 EMBL:BR000693 IPI:IPI00387249 RefSeq:NP_079752.3
UniGene:Mm.440686 ProteinModelPortal:Q9DCV4 SMR:Q9DCV4
PhosphoSite:Q9DCV4 PaxDb:Q9DCV4 PRIDE:Q9DCV4
Ensembl:ENSMUST00000029888 GeneID:66302 KEGG:mmu:66302
UCSC:uc008sca.2 InParanoid:Q9DCV4 NextBio:321257 Bgee:Q9DCV4
CleanEx:MM_2410005O16RIK Genevestigator:Q9DCV4
GermOnline:ENSMUSG00000028229 Uniprot:Q9DCV4
Length = 305
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 91/229 (39%), Positives = 142/229 (62%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L ++D L+E + E++ ++L + ED E++WRL R ++A
Sbjct: 66 ISQAAVVHATAKV-EEILAQADYLYESGETEKLYQLLIQYKESEDGELLWRLARASRDIA 124
Query: 61 THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE 120
S + S+ +KK L+ A AL + E A HKW A+ +++ EG K +I
Sbjct: 125 QLSKT-SEEEKKVLVYEALDYAKRALEKKESSSAAHKWYAICISDVGDYEGIKVKIANAY 183
Query: 121 TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF 180
IK H KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F P+S+YEEAL+YF
Sbjct: 184 VIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKVLFANPPSSTYEEALRYF 243
Query: 181 LEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
+AE+ P FYS+N+L+LGKTY++L N + AA++L K YP ++D+
Sbjct: 244 HKAEEVDPNFYSKNLLLLGKTYLKLNNKKLAAFWLVKAKGYPAHTEEDK 292
Score = 241 (89.9 bits), Expect = 2.1e-20, P = 2.1e-20
Identities = 44/92 (47%), Positives = 64/92 (69%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F P+S+YEEAL+YF +AE+ P FYS+N+L+LGKTY++L
Sbjct: 210 CYTFAEMPWYQRRIAKVLFANPPSSTYEEALRYFHKAEEVDPNFYSKNLLLLGKTYLKLN 269
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K YPA E K ++ + L
Sbjct: 270 NKKLAAFWLVKAKGYPAHTEEDKQIQTEAAQL 301
>ZFIN|ZDB-GENE-070928-17 [details] [associations]
symbol:zgc:171674 "zgc:171674" species:7955 "Danio
rerio" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
ZFIN:ZDB-GENE-070928-17 Gene3D:1.25.40.10
GeneTree:ENSGT00530000063162 OMA:NAYVIKE EMBL:FP102273
IPI:IPI00868415 Ensembl:ENSDART00000112680 ArrayExpress:F1R0C4
Bgee:F1R0C4 Uniprot:F1R0C4
Length = 295
Score = 464 (168.4 bits), Expect = 5.0e-44, P = 5.0e-44
Identities = 88/216 (40%), Positives = 140/216 (64%)
Query: 14 SEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
+EE L+++D L+ + ++++++L+ D E +WRL RV +LA SS+ +K++
Sbjct: 68 AEEILEQADYLYSCGETQKLHQLLDKHRDSGDAEFLWRLARVCRDLALLSSA---EEKRR 124
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
L A+ AL + E YA HKW A+ L++ EG K +I I+ H+ +AI+L
Sbjct: 125 LTYEAFQYATAALQRDEQCYAAHKWFAICLSDVGDYEGIKVKIGNSYIIREHLERAIQLN 184
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P D+T++ +LG WCF ++PWYQRK+A IF + PT++YEEAL++FL AE+ P FYS+
Sbjct: 185 PRDATSIHILGFWCFAFAELPWYQRKVAAVIFGSPPTATYEEALEFFLRAEEVEPSFYSK 244
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
N+LMLGKTYM L + +QAA +L ++YP ++D+
Sbjct: 245 NLLMLGKTYMMLRDVQQAALWLTKARDYPAVTEEDR 280
Score = 260 (96.6 bits), Expect = 2.1e-22, P = 2.1e-22
Identities = 48/95 (50%), Positives = 70/95 (73%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
CF ++PWYQRK+A IF + PT++YEEAL++FL AE+ P FYS+N+LMLGKTYM L
Sbjct: 198 CFAFAELPWYQRKVAAVIFGSPPTATYEEALEFFLRAEEVEPSFYSKNLLMLGKTYMMLR 257
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLL-EKAKSYLKK 323
+ +QAA +L ++YPAV E + + ++A+ LK+
Sbjct: 258 DVQQAALWLTKARDYPAVTEEDRQVHQEAQELLKR 292
>UNIPROTKB|F1NBF8 [details] [associations]
symbol:FAM82B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] InterPro:IPR011990
GO:GO:0005739 Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162
OMA:NAYVIKE EMBL:AADN02024796 IPI:IPI00820262
Ensembl:ENSGALT00000036639 Uniprot:F1NBF8
Length = 264
Score = 443 (161.0 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 87/220 (39%), Positives = 138/220 (62%)
Query: 12 KVSEEFLKKSDDLFEEQQFEEVNKML--ESSEYKEDVEIIWRLVRVKYNLATHSSSLSDA 69
KV+E ++++D L+ + E++ ++L + ED E++WRL R +LA S + ++
Sbjct: 34 KVAE-VIEQADYLYGSGETEKLYQLLVQHKNRTSEDAELLWRLARASRDLAQLSITSAE- 91
Query: 70 DKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKA 129
+K+QL + AL ++E + A HKW A+ L++ EG K +I IK H +A
Sbjct: 92 EKRQLAYDSLEYAKRALEKNEANSAAHKWYAICLSDVGDYEGIKVKIGNAFVIKEHFERA 151
Query: 130 IELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPL 189
IEL P D+T++ ++G+WC+ ++PWYQRKIA +F T PTS+YEEAL+YF AE+ P
Sbjct: 152 IELNPKDATSVHLMGVWCYSFAELPWYQRKIAAMLFATPPTSTYEEALRYFHMAEEADPN 211
Query: 190 FYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
FYS+N+L LGKTY++L N + A +L K YP ++D+
Sbjct: 212 FYSKNLLFLGKTYLKLNNKKMALLWLSKAKEYPAHTEEDK 251
Score = 242 (90.2 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 45/87 (51%), Positives = 60/87 (68%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ ++PWYQRKIA +F T PTS+YEEAL+YF AE+ P FYS+N+L LGKTY++L
Sbjct: 169 CYSFAELPWYQRKIAAMLFATPPTSTYEEALRYFHMAEEADPNFYSKNLLFLGKTYLKLN 228
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
N + A +L K YPA E K ++K
Sbjct: 229 NKKMALLWLSKAKEYPAHTEEDKQVQK 255
>UNIPROTKB|E5RH53 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 IPI:IPI00977210
ProteinModelPortal:E5RH53 SMR:E5RH53 PRIDE:E5RH53
Ensembl:ENST00000523911 ArrayExpress:E5RH53 Bgee:E5RH53
Uniprot:E5RH53
Length = 248
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 86/229 (37%), Positives = 136/229 (59%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L+++D L+E + E++ ++L + ED E++WRL R ++A
Sbjct: 27 ISQAAVVHATAKV-EEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVA 85
Query: 61 THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE 120
S + S+ +KK L+ A AL ++E +A HKW A+ L++ EG KA+I
Sbjct: 86 QLSRT-SEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAY 144
Query: 121 TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF 180
IK H KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F T P+S+YE+AL YF
Sbjct: 145 IIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYF 204
Query: 181 LEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
AE+ GKTY++L N + AA++L K+YP ++D+
Sbjct: 205 HRAEQ-------------GKTYLKLHNKKLAAFWLMKAKDYPAHTEEDK 240
Score = 171 (65.3 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 37/90 (41%), Positives = 55/90 (61%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F T P+S+YE+AL YF AE+ GKTY++L
Sbjct: 171 CYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ-------------GKTYLKLH 217
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKS 319
N + AA++L K+YPA E K +++ +S
Sbjct: 218 NKKLAAFWLMKAKDYPAHTEEDKQVKRNRS 247
>UNIPROTKB|H0YB83 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 Ensembl:ENST00000519789 Uniprot:H0YB83
Length = 225
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 73/185 (39%), Positives = 114/185 (61%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L+++D L+E + E++ ++L + ED E++WRL R ++A
Sbjct: 17 ISQAAVVHATAKV-EEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVA 75
Query: 61 THSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLE 120
S + S+ +KK L+ A AL ++E +A HKW A+ L++ EG KA+I
Sbjct: 76 QLSRT-SEEEKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAY 134
Query: 121 TIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYF 180
IK H KAIEL P D+T++ ++G+WC+ +MPWYQR+IA +F T P+S+YE+AL YF
Sbjct: 135 IIKEHFEKAIELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYF 194
Query: 181 LEAEK 185
AE+
Sbjct: 195 HRAEQ 199
Score = 122 (48.0 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEK 268
C+ +MPWYQR+IA +F T P+S+YE+AL YF AE+
Sbjct: 161 CYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ 199
>DICTYBASE|DDB_G0278793 [details] [associations]
symbol:DDB_G0278793 "Regulator of microtubule
dynamics protein 1" species:44689 "Dictyostelium discoideum"
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR011990
InterPro:IPR013026 PROSITE:PS50293 dictyBase:DDB_G0278793
GO:GO:0045335 Gene3D:1.25.40.10 EMBL:AAFI02000024
InterPro:IPR013105 Pfam:PF07719 eggNOG:NOG70879 RefSeq:XP_641966.1
ProteinModelPortal:Q54XR4 EnsemblProtists:DDB0206195 GeneID:8621698
KEGG:ddi:DDB_G0278793 InParanoid:Q54XR4 OMA:AKEFYKI
ProtClustDB:CLSZ2430089 Uniprot:Q54XR4
Length = 229
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 81/219 (36%), Positives = 130/219 (59%)
Query: 14 SEEFLKKSDDLFEEQQFEEVNKMLESS--EYKEDVEIIWRLVRVKYNLATHSSSLSDAD- 70
+++ + K D L E++F +++++L +Y EDVEI+WRL R ++ + +++ D
Sbjct: 4 AQKIVDKVDQLHLEREFVKISELLTEGHKQYPEDVEIMWRLARSYFD---KNEEVANKDE 60
Query: 71 KKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAI 130
KK+LI A L A + +H+A+HKWLA++++ +K +I IK H KA
Sbjct: 61 KKKLIEQALELTNKASTINPNHWAVHKWLAILISALGDHISSKEKIANAFKIKDHAVKAN 120
Query: 131 ELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLF 190
ELKP+D+TTL +LG WCF I+ + W +R A+A+F T PTS+Y+EAL YFLEA K P
Sbjct: 121 ELKPNDATTLHLLGRWCFSISSIGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDPTN 180
Query: 191 YSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
+N L G TY L++ +A + ++ K + D+
Sbjct: 181 I-RNALFTGDTYAALKDNAKAKEFYKIAAAIEPKSEFDK 218
Score = 147 (56.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 35/94 (37%), Positives = 54/94 (57%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
CF I+ + W +R A+A+F T PTS+Y+EAL YFLEA K P +N L G TY L+
Sbjct: 137 CFSISSIGWIERTAASALFGTPPTSTYDEALTYFLEAYKCDPTNI-RNALFTGDTYAALK 195
Query: 290 NYEQAAYYLEMTKNYPAVQEATK-LLEKAKSYLK 322
+ +A + ++ E K L+++A++ K
Sbjct: 196 DNAKAKEFYKIAAAIEPKSEFDKNLVKEAQNKAK 229
>UNIPROTKB|H0YB03 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR011990 GO:GO:0005813 Gene3D:1.25.40.10 HGNC:HGNC:24285
ChiTaRS:FAM82B EMBL:AC103817 Ensembl:ENST00000520719 Bgee:H0YB03
Uniprot:H0YB03
Length = 165
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 65/160 (40%), Positives = 97/160 (60%)
Query: 70 DKKQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKA 129
+KK L+ A AL ++E +A HKW A+ L++ EG KA+I IK H KA
Sbjct: 2 EKKLLVYEALEYAKRALEKNESSFASHKWYAICLSDVGDYEGIKAKIANAYIIKEHFEKA 61
Query: 130 IELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPL 189
IEL P D+T++ ++G+WC+ +MPWYQR+IA +F T P+S+YE+AL YF AE+
Sbjct: 62 IELNPKDATSIHLMGIWCYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ---- 117
Query: 190 FYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
GKTY++L N + AA++L K+YP ++D+
Sbjct: 118 ---------GKTYLKLHNKKLAAFWLMKAKDYPAHTEEDK 148
Score = 168 (64.2 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 37/92 (40%), Positives = 54/92 (58%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ +MPWYQR+IA +F T P+S+YE+AL YF AE+ GKTY++L
Sbjct: 79 CYTFAEMPWYQRRIAKMLFATPPSSTYEKALGYFHRAEQ-------------GKTYLKLH 125
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEKAKSYL 321
N + AA++L K+YPA E K ++ + L
Sbjct: 126 NKKLAAFWLMKAKDYPAHTEEDKQIQTEAAQL 157
>WB|WBGene00009369 [details] [associations]
symbol:F33H2.6 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR011990 InterPro:IPR013026 PROSITE:PS50293
Gene3D:1.25.40.10 GO:GO:0045132 eggNOG:NOG70879
GeneTree:ENSGT00530000063162 EMBL:Z81526 PIR:T21710
RefSeq:NP_493617.2 ProteinModelPortal:O62216 SMR:O62216
DIP:DIP-25382N IntAct:O62216 MINT:MINT-228202 PaxDb:O62216
EnsemblMetazoa:F33H2.6 GeneID:173369 KEGG:cel:CELE_F33H2.6
UCSC:F33H2.6 CTD:173369 WormBase:F33H2.6 HOGENOM:HOG000114941
InParanoid:O62216 OMA:PTTWHIL NextBio:879363 Uniprot:O62216
Length = 301
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 71/213 (33%), Positives = 115/213 (53%)
Query: 18 LKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSSLSDADKKQLILS 77
++ SD+L++ + +L+ E E++WRL RV S + +K+LIL
Sbjct: 69 VRNSDELYDNYLIDNCYNILKKFENSNCSELLWRLARVVCEKGKLSKDQNQ--RKELILE 126
Query: 78 AYFLVYNALPQHEDH--YAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELKPD 135
AY +V AL + + HKW A++L+ +EG K+RI++ ++ H+ KA+ + +
Sbjct: 127 AYGIVKKALDNEPKNGCFGAHKWYAILLDYVGEIEGNKSRIEKSFQVRKHLEKALSIFEN 186
Query: 136 DSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNV 195
D TT +LG+W F +M + R +A AIF T P S+Y+EAL YFL+AE+ P FYS N
Sbjct: 187 DPTTWHILGVWHFSFANMGYATRMVAKAIFATPPASTYQEALHYFLKAEQISPGFYSTNT 246
Query: 196 LMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKD 228
+G+ Y +L +A + + PV D
Sbjct: 247 YYIGEVYEQLGQKAEALDAFKQSFKMPVVTSDD 279
Score = 147 (56.8 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 36/95 (37%), Positives = 52/95 (54%)
Query: 231 FEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLEN 290
F +M + R +A AIF T P S+Y+EAL YFL+AE+ P FYS N +G+ Y +L
Sbjct: 199 FSFANMGYATRMVAKAIFATPPASTYQEALHYFLKAEQISPGFYSTNTYYIGEVYEQLGQ 258
Query: 291 YEQAAYYLEMTKNYPAVQEATKLLEKAKSY--LKK 323
+A + + P V ++ K K+Y LKK
Sbjct: 259 KAEALDAFKQSFKMPVVTSDDAVIHK-KAYEKLKK 292
>RGD|1308697 [details] [associations]
symbol:Rmdn3 "regulator of microtubule dynamics 3" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005741 "mitochondrial outer membrane"
evidence=ISO;ISS] [GO:0005874 "microtubule" evidence=IEA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=ISO;ISS]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR011990 RGD:1308697 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 eggNOG:NOG84960 HOGENOM:HOG000015374
HOVERGEN:HBG072518 CTD:55177 OMA:FPFARER OrthoDB:EOG4PG61R
EMBL:BC082081 IPI:IPI00471759 RefSeq:NP_001014068.1
UniGene:Rn.18772 ProteinModelPortal:Q66H15 PhosphoSite:Q66H15
PRIDE:Q66H15 Ensembl:ENSRNOT00000016356 GeneID:311328
KEGG:rno:311328 UCSC:RGD:1308697 InParanoid:Q66H15 NextBio:663337
Genevestigator:Q66H15 Uniprot:Q66H15
Length = 471
Score = 286 (105.7 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 65/219 (29%), Positives = 122/219 (55%)
Query: 18 LKKSDDLFE--EQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
L+++D+L + EQ +E ++L +++ Y + +WRL R Y+ T + +++KK
Sbjct: 243 LQQADELHQGSEQNKQEGFQLLLNNKLAYGSRQDFLWRLARA-YSDMTELTE-EESEKKS 300
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
L+ AL + ++ A H W AV+ + A EG RIQ + K H++KAIEL+
Sbjct: 301 YALNGKEEAEAALKKGDESAASHLWYAVLCGQLAEHEGISKRIQSGFSFKEHVDKAIELQ 360
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P+D F+LG WC++++ + W ++K A A+F++ +++ ++AL+ FL+AE+ P F
Sbjct: 361 PEDPRGHFLLGRWCYQVSHLSWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKA 420
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQCFE 232
+ + K Y L +A +L + + P ++D F+
Sbjct: 421 GRVYISKCYRELGKNSEARKWLNLAQELPNITNEDSAFQ 459
Score = 118 (46.6 bits), Expect = 0.00035, P = 0.00035
Identities = 21/87 (24%), Positives = 47/87 (54%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A A+F++ +++ ++AL+ FL+AE+ P F + + K Y L
Sbjct: 374 CYQVSHLSWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKAGRVYISKCYRELG 433
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
+A +L + + P + +K
Sbjct: 434 KNSEARKWLNLAQELPNITNEDSAFQK 460
>MGI|MGI:1915059 [details] [associations]
symbol:Rmdn3 "regulator of microtubule dynamics 3"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005741 "mitochondrial outer membrane" evidence=ISO]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISO] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] InterPro:IPR011990 MGI:MGI:1915059 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
EMBL:AL772264 GeneTree:ENSGT00530000063162 eggNOG:NOG84960
HOGENOM:HOG000015374 HOVERGEN:HBG072518 CTD:55177 OMA:FPFARER
OrthoDB:EOG4PG61R EMBL:AK146299 EMBL:AK151090 EMBL:AK153369
EMBL:AK153322 EMBL:BC055754 EMBL:BC061186 EMBL:BR000695
IPI:IPI00678532 RefSeq:NP_001028308.1 UniGene:Mm.475909
ProteinModelPortal:Q3UJU9 SMR:Q3UJU9 IntAct:Q3UJU9 STRING:Q3UJU9
PhosphoSite:Q3UJU9 PaxDb:Q3UJU9 PRIDE:Q3UJU9
Ensembl:ENSMUST00000094695 GeneID:67809 KEGG:mmu:67809
UCSC:uc008lte.2 InParanoid:Q3UJU9 NextBio:325611 Bgee:Q3UJU9
CleanEx:MM_1200015F23RIK Genevestigator:Q3UJU9 Uniprot:Q3UJU9
Length = 470
Score = 271 (100.5 bits), Expect = 4.3e-23, P = 4.3e-23
Identities = 61/219 (27%), Positives = 120/219 (54%)
Query: 18 LKKSDDLFE--EQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
L ++D+L + +Q E ++L +++ Y + +WRL R +++ + ++ KK
Sbjct: 243 LLQADELHQGSKQDKREGFQLLLNNKLAYGSRQDFLWRLARAYSDMSDLTEE--ESGKKS 300
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
L+ AL + ++ A H W AV+ + A EG RIQ + K H++KAIEL+
Sbjct: 301 YALNGKEEAEAALKKGDESAACHLWYAVLCGQLAEHEGISKRIQSGFSFKEHVDKAIELQ 360
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P+D F+LG WC++++ + W ++K A A+F++ +++ ++AL+ FL+AE+ P F
Sbjct: 361 PEDPRGHFLLGRWCYQVSHLNWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKA 420
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQCFE 232
+ + K Y L +A ++++ + P ++D F+
Sbjct: 421 GRVYISKCYRELGKNSEARKWMKLAQELPDVTNEDSAFQ 459
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 21/87 (24%), Positives = 48/87 (55%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A A+F++ +++ ++AL+ FL+AE+ P F + + K Y L
Sbjct: 374 CYQVSHLNWLEKKTATALFESPLSATVQDALQSFLKAEELQPGFSKAGRVYISKCYRELG 433
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
+A ++++ + P V +K
Sbjct: 434 KNSEARKWMKLAQELPDVTNEDSAFQK 460
>UNIPROTKB|F1P0I6 [details] [associations]
symbol:FAM82A2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] InterPro:IPR011990 GO:GO:0005741 GO:GO:0006874
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:FPFARER
EMBL:AADN02040043 IPI:IPI00818795 Ensembl:ENSGALT00000040424
Uniprot:F1P0I6
Length = 478
Score = 268 (99.4 bits), Expect = 1.0e-22, P = 1.0e-22
Identities = 64/228 (28%), Positives = 122/228 (53%)
Query: 16 EFLKKSDDLF--EEQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADK 71
+ L+++D L +E++ E ++L +++ Y + + +WRL R ++ + D D+
Sbjct: 248 QLLQQADHLHSGDEREKREGFQLLLNNKLAYADQGDFLWRLARAHSDMYDITE---DTDE 304
Query: 72 KQLILSAYFLVYNALPQHEDHYA-IHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAI 130
K+ S Q D A H+W A++ + A E + RIQ K H++KAI
Sbjct: 305 KKSYASDGKEELEIAFQKWDQSAECHQWYAILCGQLAEHESIQKRIQTGYIFKEHIDKAI 364
Query: 131 ELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLF 190
LKP+D + ++LG WC++++ + W ++K A+A+F+T PT++ ++AL+ FL+ E+ P F
Sbjct: 365 ALKPEDPKSYYLLGRWCYQVSHLGWLEKKTASALFETPPTATVQDALQNFLKVEELSPGF 424
Query: 191 YSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPV--KQDKDQCFEITDM 236
+ + K Y + N A ++ + PV K+D + E+ +M
Sbjct: 425 SKAVRMYIAKCYKDMGNNSAALLWMNLASELPVNTKEDSETERELEEM 472
Score = 125 (49.1 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 26/96 (27%), Positives = 52/96 (54%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A+A+F+T PT++ ++AL+ FL+ E+ P F + + K Y +
Sbjct: 381 CYQVSHLGWLEKKTASALFETPPTATVQDALQNFLKVEELSPGFSKAVRMYIAKCYKDMG 440
Query: 290 NYEQAAYYLEMTKNYPAV----QEATKLLEKAKSYL 321
N A ++ + P E + LE+ +S L
Sbjct: 441 NNSAALLWMNLASELPVNTKEDSETERELEEMRSIL 476
>UNIPROTKB|Q2TBQ7 [details] [associations]
symbol:RMDN2 "Regulator of microtubule dynamics protein 2"
species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR011990 GO:GO:0016021 GO:GO:0005739 Gene3D:1.25.40.10
GO:GO:0000922 GO:GO:0005874 GeneTree:ENSGT00530000063162
eggNOG:NOG84960 EMBL:BC109797 EMBL:DV832064 IPI:IPI00708381
IPI:IPI00847088 RefSeq:NP_001035598.1 UniGene:Bt.23919
Ensembl:ENSBTAT00000046712 Ensembl:ENSBTAT00000046717 GeneID:506362
KEGG:bta:506362 CTD:151393 HOGENOM:HOG000015374 HOVERGEN:HBG072518
OMA:GYITANT OrthoDB:EOG408N8M NextBio:20867577 Uniprot:Q2TBQ7
Length = 410
Score = 252 (93.8 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 57/224 (25%), Positives = 113/224 (50%)
Query: 15 EEFLKKSDDLF--EEQQFEEVNKMLESSE-YKEDVEIIWRLVRVKYNLATHSSSLSDADK 71
+ ++++D+L E ++ E + + E +++++E IWR R ++ S+++ + K
Sbjct: 180 DALIQRADNLRVNESRKVESFELLCDHKEKFRDEIEFIWRFARAYGDMYELSTNIQE--K 237
Query: 72 KQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIE 131
K L A+ + + H W AV+ + EG + +I K H++KAIE
Sbjct: 238 KHYANIGKTLGEKAIMRAPKNGYCHLWYAVLCGYVSEFEGLQNKINYGYRFKEHLDKAIE 297
Query: 132 LKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFY 191
P++ ++ G +C+ ++ + W +RK+A +F +P+S+ +EAL+ FL+ E+ P F
Sbjct: 298 FLPEEPFLYYLKGRYCYAVSKLSWIERKMAATLFGNIPSSTVQEALQNFLKVEELQPGFS 357
Query: 192 SQNVLMLGKTYMRLENYEQAAYYLEMTKNYP--VKQDKDQCFEI 233
N + + K Y L + A + + P K+DKD E+
Sbjct: 358 KSNYMFMAKCYADLNQIDSAMKFCNLAVLLPCITKEDKDAQKEV 401
Score = 138 (53.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 37/136 (27%), Positives = 69/136 (50%)
Query: 193 QNVLMLGKTYMRLENYEQAAYYL-EMTKNYPVKQDKDQCFEITDMPWYQRKIANAIFDTL 251
QN + G Y E+ ++A +L E Y +K C+ ++ + W +RK+A +F +
Sbjct: 279 QNKINYG--YRFKEHLDKAIEFLPEEPFLYYLKGR--YCYAVSKLSWIERKMAATLFGNI 334
Query: 252 PTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPAV---- 307
P+S+ +EAL+ FL+ E+ P F N + + K Y L + A + + P +
Sbjct: 335 PSSTVQEALQNFLKVEELQPGFSKSNYMFMAKCYADLNQIDSAMKFCNLAVLLPCITKED 394
Query: 308 QEATKLLEKAKSYLKK 323
++A K ++K + LK+
Sbjct: 395 KDAQKEVKKISTSLKR 410
>UNIPROTKB|Q5R6Z1 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9601 "Pongo abelii" [GO:0005741 "mitochondrial outer
membrane" evidence=ISS] [GO:0006874 "cellular calcium ion
homeostasis" evidence=ISS] InterPro:IPR011990 GO:GO:0016021
GO:GO:0005634 GO:GO:0006915 GO:GO:0030154 GO:GO:0005741
GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 HOVERGEN:HBG072518 CTD:55177
OMA:FPFARER OrthoDB:EOG4PG61R EMBL:CR859250 EMBL:CR860332
RefSeq:NP_001125839.1 UniGene:Pab.18766 ProteinModelPortal:Q5R6Z1
Ensembl:ENSPPYT00000007498 GeneID:100172768 KEGG:pon:100172768
InParanoid:Q5R6Z1 Uniprot:Q5R6Z1
Length = 470
Score = 252 (93.8 bits), Expect = 5.6e-21, P = 5.6e-21
Identities = 59/215 (27%), Positives = 115/215 (53%)
Query: 18 LKKSDDLF--EEQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
L+++D+L +EQ E ++L +++ Y + +WRL R ++ + +S+ KK
Sbjct: 242 LQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSE--KKS 299
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
L AL + ++ H W AV+ + A E + RIQ + K H++KAI L+
Sbjct: 300 YALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQ 359
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P++ F+LG WC++++ + W ++K A A+ ++ +++ E+AL+ FL+AE+ P F
Sbjct: 360 PENPMAYFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKA 419
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYP--VKQD 226
+ + K Y L +A +++++ P K+D
Sbjct: 420 GRVYISKCYRELGKNSEARWWMKLALELPDVTKED 454
Score = 119 (46.9 bits), Expect = 0.00027, P = 0.00027
Identities = 22/87 (25%), Positives = 49/87 (56%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A A+ ++ +++ E+AL+ FL+AE+ P F + + K Y L
Sbjct: 373 CYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELG 432
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
+A +++++ P V + L+K
Sbjct: 433 KNSEARWWMKLALELPDVTKEDLALQK 459
>UNIPROTKB|H0YMB1 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011990 GO:GO:0005739 Gene3D:1.25.40.10
EMBL:AC012476 HGNC:HGNC:25550 ChiTaRS:FAM82A2
Ensembl:ENST00000558232 Uniprot:H0YMB1
Length = 306
Score = 245 (91.3 bits), Expect = 8.0e-21, P = 8.0e-21
Identities = 53/192 (27%), Positives = 100/192 (52%)
Query: 37 LESSEYKEDVEIIWRLVRVKYNLATHSSSLSDADKKQLILSAYFLVYNALPQHEDHYAIH 96
L +Y + +WRL R ++ + +S+ KK L AL + ++ H
Sbjct: 101 LSGLQYGSRQDFLWRLARAYSDMCELTEEVSE--KKSYALDGKEEAEAALEKGDESADCH 158
Query: 97 KWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELKPDDSTTLFMLGMWCFEITDMPWY 156
W AV+ + A E + RIQ + K H++KAI L+P++ F+LG WC++++ + W
Sbjct: 159 LWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQPENPMAHFLLGRWCYQVSHLSWL 218
Query: 157 QRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLENYEQAAYYLE 216
++K A A+ ++ +++ E+AL+ FL+AE+ P F + + K Y L +A ++++
Sbjct: 219 EKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELGKNSEARWWMK 278
Query: 217 MTKNYP--VKQD 226
+ P K+D
Sbjct: 279 LALELPDVTKED 290
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 21/87 (24%), Positives = 49/87 (56%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A A+ ++ +++ E+AL+ FL+AE+ P F + + K Y L
Sbjct: 209 CYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELG 268
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
+A +++++ P V + ++K
Sbjct: 269 KNSEARWWMKLALELPDVTKEDLAIQK 295
>UNIPROTKB|Q96TC7 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0000922 "spindle pole" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005741 "mitochondrial outer membrane" evidence=IDA]
[GO:0006874 "cellular calcium ion homeostasis" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR011990
GO:GO:0016021 GO:GO:0005634 GO:GO:0006915 GO:GO:0030154
GO:GO:0005741 GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 EMBL:CH471125 eggNOG:NOG84960 HOVERGEN:HBG072518
CTD:55177 OMA:FPFARER OrthoDB:EOG4PG61R EMBL:AB000782 EMBL:AY358793
EMBL:AK001441 EMBL:AK025963 EMBL:AK092058 EMBL:AK123282
EMBL:AK123192 EMBL:BC008970 EMBL:BC063844 EMBL:AJ242719
EMBL:BR000691 IPI:IPI00410079 IPI:IPI00845345 RefSeq:NP_060615.1
UniGene:Hs.511067 ProteinModelPortal:Q96TC7 SMR:Q96TC7
IntAct:Q96TC7 MINT:MINT-1631442 STRING:Q96TC7 PhosphoSite:Q96TC7
DMDM:147643203 PaxDb:Q96TC7 PeptideAtlas:Q96TC7 PRIDE:Q96TC7
DNASU:55177 Ensembl:ENST00000260385 Ensembl:ENST00000338376
GeneID:55177 KEGG:hsa:55177 UCSC:uc001zmo.1 GeneCards:GC15M041028
HGNC:HGNC:25550 HPA:HPA009975 MIM:611873 neXtProt:NX_Q96TC7
PharmGKB:PA162387926 InParanoid:Q96TC7 PhylomeDB:Q96TC7
ChiTaRS:FAM82A2 GenomeRNAi:55177 NextBio:58979 ArrayExpress:Q96TC7
Bgee:Q96TC7 CleanEx:HS_FAM82A2 Genevestigator:Q96TC7 Uniprot:Q96TC7
Length = 470
Score = 250 (93.1 bits), Expect = 9.3e-21, P = 9.3e-21
Identities = 59/215 (27%), Positives = 115/215 (53%)
Query: 18 LKKSDDLF--EEQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
L+++D+L +EQ E ++L +++ Y + +WRL R ++ + +S+ KK
Sbjct: 242 LQQADELHRGDEQGKREGFQLLLNNKLVYGSRQDFLWRLARAYSDMCELTEEVSE--KKS 299
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
L AL + ++ H W AV+ + A E + RIQ + K H++KAI L+
Sbjct: 300 YALDGKEEAEAALEKGDESADCHLWYAVLCGQLAEHESIQRRIQSGFSFKEHVDKAIALQ 359
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P++ F+LG WC++++ + W ++K A A+ ++ +++ E+AL+ FL+AE+ P F
Sbjct: 360 PENPMAHFLLGRWCYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKA 419
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYP--VKQD 226
+ + K Y L +A +++++ P K+D
Sbjct: 420 GRVYISKCYRELGKNSEARWWMKLALELPDVTKED 454
Score = 117 (46.2 bits), Expect = 0.00045, P = 0.00045
Identities = 21/87 (24%), Positives = 49/87 (56%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C++++ + W ++K A A+ ++ +++ E+AL+ FL+AE+ P F + + K Y L
Sbjct: 373 CYQVSHLSWLEKKTATALLESPLSATVEDALQSFLKAEELQPGFSKAGRVYISKCYRELG 432
Query: 290 NYEQAAYYLEMTKNYPAVQEATKLLEK 316
+A +++++ P V + ++K
Sbjct: 433 KNSEARWWMKLALELPDVTKEDLAIQK 459
>UNIPROTKB|Q1JQC5 [details] [associations]
symbol:RMDN3 "Regulator of microtubule dynamics protein 3"
species:9913 "Bos taurus" [GO:0005741 "mitochondrial outer
membrane" evidence=ISS] [GO:0006874 "cellular calcium ion
homeostasis" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] InterPro:IPR011990
GO:GO:0016021 GO:GO:0005634 GO:GO:0006915 GO:GO:0030154
GO:GO:0005741 GO:GO:0006874 Gene3D:1.25.40.10 GO:GO:0000922
GO:GO:0005874 GeneTree:ENSGT00530000063162 eggNOG:NOG84960
HOGENOM:HOG000015374 HOVERGEN:HBG072518 EMBL:BC116057
IPI:IPI00698367 RefSeq:NP_001069147.1 UniGene:Bt.22185
Ensembl:ENSBTAT00000003795 GeneID:514748 KEGG:bta:514748 CTD:55177
InParanoid:Q1JQC5 OMA:FPFARER OrthoDB:EOG4PG61R NextBio:20871490
Uniprot:Q1JQC5
Length = 471
Score = 247 (92.0 bits), Expect = 2.0e-20, P = 2.0e-20
Identities = 59/219 (26%), Positives = 115/219 (52%)
Query: 18 LKKSDDLFE--EQQFEEVNKMLESSE--YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQ 73
L+++D+L + EQ E ++L +++ + + +WRL R ++ + S+ K+
Sbjct: 243 LQQADELHQGSEQGKREGFQLLLNNKLVHGSRQDFLWRLARAYSDMCELTEEASE--KRS 300
Query: 74 LILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELK 133
LS AL + ++ H+W AV+ + A EG + RIQ + K H++KAI LK
Sbjct: 301 YALSGKEEAEVALEKGNENAECHQWYAVLCGQLAEHEGIQRRIQSGFSFKEHVDKAIALK 360
Query: 134 PDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQ 193
P++ F+LG WC++++ + W ++K A A+ ++ ++ ++AL FL+AE+ P F
Sbjct: 361 PENPMAHFLLGRWCYQVSHLSWLEKKTATALSESPLGATVQDALSSFLKAEELQPGFSKA 420
Query: 194 NVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQCFE 232
+ + K Y L +A ++++ P +D F+
Sbjct: 421 GRIYICKCYKELGKNPEAKEWMKLALELPNVTKEDSAFQ 459
>UNIPROTKB|F1SSS8 [details] [associations]
symbol:FAM82A2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] InterPro:IPR011990 GO:GO:0005741 GO:GO:0006874
Gene3D:1.25.40.10 GeneTree:ENSGT00530000063162 OMA:FPFARER
EMBL:CU633257 Ensembl:ENSSSCT00000005264 Uniprot:F1SSS8
Length = 472
Score = 241 (89.9 bits), Expect = 9.3e-20, P = 9.3e-20
Identities = 55/201 (27%), Positives = 107/201 (53%)
Query: 34 NKMLESSEYKEDVEIIWRLVRVKYNLATHSSSLSDADKKQLILSAYFLVYNALPQHEDHY 93
NK++ S ++D +WRL R ++ + S+ KK LS AL + +++
Sbjct: 266 NKLVHGS--RQD--FLWRLARAYSDMCELAEEASE--KKSHALSGKEAAEAALEKGDENA 319
Query: 94 AIHKWLAVILNEKATLEGTKARIQQ--LETIKHHMNKAIELKPDDSTTLFMLGMWCFEIT 151
H+W AV+ + A E + RIQ + + H++KAI L+P++ T F+LG WC++++
Sbjct: 320 ESHQWYAVLCGQLAEHESIQKRIQSGFISPPQEHVDKAIALQPENPMTHFLLGRWCYQVS 379
Query: 152 DMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLENYEQA 211
+ W ++K A A+ ++ +++ ++AL+ FL+AE+ P F + + K Y L +A
Sbjct: 380 HLSWLEKKTATALSESPLSATVQDALQSFLKAEELKPGFSKAGRIYISKCYRELGKNPEA 439
Query: 212 AYYLEMTKNYPVKQDKDQCFE 232
++++ P +D F+
Sbjct: 440 KQWVKLALELPDVTKEDSAFQ 460
>RGD|1559836 [details] [associations]
symbol:Rmdn2 "regulator of microtubule dynamics 2" species:10116
"Rattus norvegicus" [GO:0000922 "spindle pole" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] RGD:1559836 GO:GO:0016021
GO:GO:0005739 GO:GO:0000922 GO:GO:0005874
GeneTree:ENSGT00530000063162 eggNOG:NOG84960 CTD:151393
HOGENOM:HOG000015374 HOVERGEN:HBG072518 OMA:GYITANT
OrthoDB:EOG408N8M EMBL:BC100261 IPI:IPI00360061
RefSeq:NP_001032277.1 UniGene:Rn.25365 PRIDE:Q498D5
Ensembl:ENSRNOT00000008045 GeneID:313840 KEGG:rno:313840
UCSC:RGD:1559836 NextBio:666893 Genevestigator:Q498D5
Uniprot:Q498D5
Length = 412
Score = 232 (86.7 bits), Expect = 4.5e-18, P = 4.5e-18
Identities = 57/221 (25%), Positives = 109/221 (49%)
Query: 18 LKKSDDLF--EEQQFEEVNKMLESSE-YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQL 74
L+K D L E + E + + E + E++E +WRLVR ++ + S + +KK
Sbjct: 185 LQKVDHLRLNEAHKMESFELLCDHKEKFSEEIEFLWRLVRAYGDM--YDLSTNTQEKKHY 242
Query: 75 ILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELKP 134
L A+ + + H W A++ + EG + +I K H++ AI+L P
Sbjct: 243 ANVGKTLGERAITRAPMNGHCHLWYALLCGYVSEFEGLQNKINCGHLFKKHLDIAIQLLP 302
Query: 135 DDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQN 194
++ ++ G +C+ ++ + W ++K+A +F +P+S+ EAL FL+ E+ P + N
Sbjct: 303 EEPVLYYLKGRYCYTVSKLSWIEKKMAATLFGEIPSSTVHEALHNFLKTEELQPGYSVSN 362
Query: 195 VLMLGKTYMRLENYEQAAYYLEMTKNYPV--KQDKDQCFEI 233
+ + K Y+ L +A + + P+ K+DKD E+
Sbjct: 363 YMYVAKCYVDLGESREAWKFCNLALLLPIVTKEDKDAHKEV 403
Score = 114 (45.2 bits), Expect = 0.00079, P = 0.00079
Identities = 26/98 (26%), Positives = 51/98 (52%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ ++ + W ++K+A +F +P+S+ EAL FL+ E+ P + N + + K Y+ L
Sbjct: 315 CYTVSKLSWIEKKMAATLFGEIPSSTVHEALHNFLKTEELQPGYSVSNYMYVAKCYVDLG 374
Query: 290 NYEQAAYYLEMTKNYPAV----QEATKLLEKAKSYLKK 323
+A + + P V ++A K ++K LK+
Sbjct: 375 ESREAWKFCNLALLLPIVTKEDKDAHKEVKKIIGSLKR 412
>UNIPROTKB|Q96LZ7 [details] [associations]
symbol:RMDN2 "Regulator of microtubule dynamics protein 2"
species:9606 "Homo sapiens" [GO:0005874 "microtubule" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0000922
"spindle pole" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR011990 GO:GO:0016021 GO:GO:0005739 EMBL:CH471053
Gene3D:1.25.40.10 GO:GO:0000922 GO:GO:0005874 eggNOG:NOG84960
CTD:151393 HOVERGEN:HBG072518 OMA:GYITANT EMBL:AK057516
EMBL:AK095462 EMBL:AY358269 EMBL:AF435956 EMBL:AC009229
EMBL:AC016689 EMBL:BC024243 EMBL:AH011736 EMBL:BR000689
EMBL:BR000692 IPI:IPI00065438 IPI:IPI00432655 IPI:IPI00845261
IPI:IPI00916110 RefSeq:NP_001164262.1 RefSeq:NP_001164263.1
RefSeq:NP_001164264.1 RefSeq:NP_653314.2 UniGene:Hs.591566
ProteinModelPortal:Q96LZ7 SMR:Q96LZ7 IntAct:Q96LZ7 STRING:Q96LZ7
PhosphoSite:Q96LZ7 DMDM:147643051 PaxDb:Q96LZ7 PRIDE:Q96LZ7
DNASU:151393 Ensembl:ENST00000234195 Ensembl:ENST00000354545
Ensembl:ENST00000406384 Ensembl:ENST00000407257
Ensembl:ENST00000417700 GeneID:151393 KEGG:hsa:151393
UCSC:uc002rqk.1 UCSC:uc002rql.3 UCSC:uc002rqm.3 UCSC:uc002rqn.2
GeneCards:GC02P038150 HGNC:HGNC:26567 HPA:HPA034706 MIM:611872
neXtProt:NX_Q96LZ7 PharmGKB:PA162387925 GenomeRNAi:151393
NextBio:86687 ArrayExpress:Q96LZ7 Bgee:Q96LZ7 CleanEx:HS_FAM82A1
Genevestigator:Q96LZ7 Uniprot:Q96LZ7
Length = 410
Score = 229 (85.7 bits), Expect = 1.4e-17, P = 1.4e-17
Identities = 56/216 (25%), Positives = 108/216 (50%)
Query: 18 LKKSDDL--FEEQQFEEVNKMLESSE-YKEDVEIIWRLVRVKYNLATHSSSLSDADKKQL 74
L+K D L E + E + + E +++++E +WR R ++ + S + +KK
Sbjct: 183 LQKVDHLRMSESGKSESFELLRDHKEKFRDEIEFMWRFARAYGDM--YELSTNTQEKKHY 240
Query: 75 ILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIELKP 134
L A+ + + H W AV+ + EG + +I K H++ AI+L P
Sbjct: 241 ANIGKTLSERAINRAPMNGHCHLWYAVLCGYVSEFEGLQNKINYGHLFKEHLDIAIKLLP 300
Query: 135 DDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQN 194
++ ++ G +C+ ++ + W ++K+A +F +P+S+ +EAL FL+AE+ P + + N
Sbjct: 301 EEPFLYYLKGRYCYTVSKLSWIEKKMAATLFGKIPSSTVQEALHNFLKAEELCPGYSNPN 360
Query: 195 VLMLGKTYMRLENYEQAAYYLEMTKNYPV--KQDKD 228
+ L K Y LE + A + + P K+DK+
Sbjct: 361 YMYLAKCYTDLEENQNALKFCNLALLLPTVTKEDKE 396
Score = 139 (54.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 30/98 (30%), Positives = 55/98 (56%)
Query: 230 CFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFYSQNVLMLGKTYMRLE 289
C+ ++ + W ++K+A +F +P+S+ +EAL FL+AE+ P + + N + L K Y LE
Sbjct: 313 CYTVSKLSWIEKKMAATLFGKIPSSTVQEALHNFLKAEELCPGYSNPNYMYLAKCYTDLE 372
Query: 290 NYEQAAYYLEMTKNYPAV----QEATKLLEKAKSYLKK 323
+ A + + P V +EA K ++K + LK+
Sbjct: 373 ENQNALKFCNLALLLPTVTKEDKEAQKEMQKIMTSLKR 410
>WB|WBGene00011501 [details] [associations]
symbol:rmd-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR011990
GO:GO:0009792 GO:GO:0005737 GO:GO:0006915 GO:GO:0007059
GO:GO:0051301 GO:GO:0007067 GO:GO:0048477 Gene3D:1.25.40.10
GO:GO:0000922 GO:GO:0005874 EMBL:Z27079
GeneTree:ENSGT00530000063162 PIR:S41007 RefSeq:NP_001255029.1
RefSeq:NP_001255030.1 ProteinModelPortal:P34560 STRING:P34560
PaxDb:P34560 GeneID:176379 KEGG:cel:CELE_T05G5.7 CTD:176379
WormBase:T05G5.7a WormBase:T05G5.7b eggNOG:NOG84960
HOGENOM:HOG000017278 InParanoid:P34560 OMA:DWIENLL NextBio:892324
Uniprot:P34560
Length = 226
Score = 201 (75.8 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 56/224 (25%), Positives = 105/224 (46%)
Query: 16 EFLKKSDDLFEEQQF----EEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSSLSDADK 71
E SD LFE ++F EE+ K E E D ++WR+ R + L+T ++S +
Sbjct: 2 ESFATSDKLFESREFVKGLEELKKRREDGEMTCD--LLWRMCRFCHELST---TMSGEQR 56
Query: 72 KQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHHMNKAIE 131
+++++ A+ + KW A++ TK +I +K ++KA+E
Sbjct: 57 RKMLIEGRDYGLEAMDLDPSSFLAAKWTAIMFGLVVDQLPTKEKINDGGRLKDMLDKALE 116
Query: 132 LKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEKQHPLFY 191
L P D L + + + I ++ W +RK A+ ++ +P ++ ++AL F A Q+ +
Sbjct: 117 LDPTDFALLHLRARFSYTIANLSWLERKAASMLYSEVPKATIDDALVDFKAAYNQNA-DW 175
Query: 192 SQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQCFEITD 235
+N+L L K ++ + +QA L P D F +T+
Sbjct: 176 IENLLFLSKCHLAKKEKQQAREMLNKAIVLPAASSNDAQF-VTE 218
>WB|WBGene00007786 [details] [associations]
symbol:rmd-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0071688
"striated muscle myosin thick filament assembly" evidence=IMP]
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
PROSITE:PS50005 PROSITE:PS50293 GO:GO:0071688 Gene3D:1.25.40.10
InterPro:IPR013105 Pfam:PF07719 GeneTree:ENSGT00530000063162
HOGENOM:HOG000017278 EMBL:Z81042 UniGene:Cel.4644 GeneID:179391
KEGG:cel:CELE_C27H6.4 UCSC:C27H6.4c.1 CTD:179391 NextBio:905196
RefSeq:NP_741608.2 ProteinModelPortal:Q8MQB5 SMR:Q8MQB5
STRING:Q8MQB5 PRIDE:Q8MQB5 EnsemblMetazoa:C27H6.4b
WormBase:C27H6.4b InParanoid:Q8MQB5 OMA:WIENTVY ArrayExpress:Q8MQB5
Uniprot:Q8MQB5
Length = 378
Score = 188 (71.2 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 47/224 (20%), Positives = 108/224 (48%)
Query: 7 AKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLATHSSSL 66
+KT+S + L +D + ++ ++ + K ++ E + ++++WRL + +
Sbjct: 151 SKTMSFEDLDALFGTDRV--QEGYDALKKRYDAGE--KSIDVLWRLAK----FCNEIGNR 202
Query: 67 SDADK-KQLILSAYFLVYNALPQHEDHYAIHKWLAVILNEKATLEGTKARIQQLETIKHH 125
+ DK K +I+ A +++ +W A++ + GTK +I++ + K +
Sbjct: 203 VEKDKRKDIIVEGKKYATEAWNTDSNNFLAARWAALMSGKVTEYLGTKEKIEEGKHCKEY 262
Query: 126 MNKAIELKPDDSTTLFMLGMWCFEITDMPWYQRKIANAIFDTLPTSSYEEALKYFLEAEK 185
+++AI ++P + L + G W + ++ W++RK A ++ PT++ EEA+ F A +
Sbjct: 263 LDRAISIQPKEDALLHLRGRWALSVANLSWFERKAAALLYSEPPTATVEEAIADFQAAHE 322
Query: 186 QHPLFYSQNVLMLGKTYMRLENYEQAAYYLEMTKNYPVKQDKDQ 229
+P + +N + LGK + + A + E D ++
Sbjct: 323 INP-DWIENTVYLGKALHQKGDKAAAKPFFEQALKITPTNDNEK 365
>UNIPROTKB|E5RGC8 [details] [associations]
symbol:RMDN1 "Regulator of microtubule dynamics protein 1"
species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] GO:GO:0005739 HGNC:HGNC:24285 ChiTaRS:FAM82B
EMBL:AC103817 IPI:IPI01011939 Ensembl:ENST00000521045
ArrayExpress:E5RGC8 Bgee:E5RGC8 Uniprot:E5RGC8
Length = 95
Score = 92 (37.4 bits), Expect = 0.00078, P = 0.00078
Identities = 22/71 (30%), Positives = 41/71 (57%)
Query: 1 MSSDEAAKTVSKVSEEFLKKSDDLFEEQQFEEVNKMLESSEYKEDVEIIWRLVRVKYNLA 60
+S +KV EE L+++D L+E + E++ ++L + ED E++WRL R ++A
Sbjct: 27 ISQAAVVHATAKV-EEILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARASRDVA 85
Query: 61 THSSSLSDADK 71
S + S+ +K
Sbjct: 86 QLSRT-SEEEK 95
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.130 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 323 323 0.00086 116 3 11 22 0.41 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 26
No. of states in DFA: 605 (64 KB)
Total size of DFA: 215 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 29.49u 0.07s 29.56t Elapsed: 00:00:34
Total cpu time: 29.50u 0.07s 29.57t Elapsed: 00:00:37
Start: Thu Aug 15 14:03:36 2013 End: Thu Aug 15 14:04:13 2013