Query psy11741
Match_columns 352
No_of_seqs 375 out of 4132
Neff 9.8
Searched_HMMs 29240
Date Fri Aug 16 17:45:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11741.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11741hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gek_A TRNA (CMO5U34)-methyltr 99.9 1.1E-22 3.7E-27 178.0 14.3 161 107-273 70-244 (261)
2 2a14_A Indolethylamine N-methy 99.9 1.8E-22 6.1E-27 177.5 15.5 185 64-273 16-237 (263)
3 3h2b_A SAM-dependent methyltra 99.9 1.3E-21 4.6E-26 165.0 15.9 140 108-273 42-181 (203)
4 2gb4_A Thiopurine S-methyltran 99.9 5.5E-22 1.9E-26 172.7 13.5 180 58-272 25-225 (252)
5 3hnr_A Probable methyltransfer 99.9 5.8E-22 2E-26 169.4 12.9 154 108-273 46-200 (220)
6 3lcc_A Putative methyl chlorid 99.9 2.7E-21 9.3E-26 167.0 15.7 175 64-274 31-207 (235)
7 3sm3_A SAM-dependent methyltra 99.9 3.7E-21 1.2E-25 165.9 16.2 158 108-273 31-206 (235)
8 3ou2_A SAM-dependent methyltra 99.9 9.5E-21 3.2E-25 161.4 18.1 153 108-272 47-203 (218)
9 3dtn_A Putative methyltransfer 99.9 1.1E-20 3.9E-25 162.9 17.1 159 107-273 44-213 (234)
10 3e23_A Uncharacterized protein 99.9 1.1E-20 3.8E-25 160.4 16.5 138 108-274 44-182 (211)
11 2kw5_A SLR1183 protein; struct 99.8 1.6E-20 5.4E-25 158.3 15.3 163 108-297 31-193 (202)
12 3dlc_A Putative S-adenosyl-L-m 99.8 3.6E-21 1.2E-25 164.0 11.4 155 109-273 45-202 (219)
13 2ex4_A Adrenal gland protein A 99.8 3.4E-20 1.2E-24 160.7 17.7 145 107-273 79-224 (241)
14 3pfg_A N-methyltransferase; N, 99.8 7.8E-21 2.7E-25 167.0 13.4 151 108-271 51-234 (263)
15 4htf_A S-adenosylmethionine-de 99.8 7.1E-21 2.4E-25 169.3 12.8 156 108-272 69-230 (285)
16 3l8d_A Methyltransferase; stru 99.8 3E-20 1E-24 161.0 16.4 145 108-272 54-198 (242)
17 1xtp_A LMAJ004091AAA; SGPP, st 99.8 2.1E-20 7.3E-25 163.1 15.5 145 107-273 93-237 (254)
18 2p7i_A Hypothetical protein; p 99.8 1.5E-20 5.2E-25 163.4 14.4 151 108-272 43-197 (250)
19 1pjz_A Thiopurine S-methyltran 99.8 4E-21 1.4E-25 162.1 10.4 138 108-272 23-174 (203)
20 3dli_A Methyltransferase; PSI- 99.8 1.2E-20 4.2E-25 163.4 13.6 144 108-275 42-185 (240)
21 1ri5_A MRNA capping enzyme; me 99.8 1.7E-20 5.9E-25 167.6 14.3 157 108-272 65-248 (298)
22 2p8j_A S-adenosylmethionine-de 99.8 7.2E-20 2.5E-24 155.0 16.6 156 108-273 24-182 (209)
23 3g5l_A Putative S-adenosylmeth 99.8 3.8E-20 1.3E-24 161.6 15.0 155 107-273 44-215 (253)
24 1vl5_A Unknown conserved prote 99.8 1.6E-20 5.5E-25 164.7 12.5 152 107-273 37-189 (260)
25 1wzn_A SAM-dependent methyltra 99.8 2.3E-20 7.8E-25 162.8 13.0 105 108-221 42-147 (252)
26 3g2m_A PCZA361.24; SAM-depende 99.8 3.7E-20 1.3E-24 165.7 14.7 157 108-273 83-273 (299)
27 3ujc_A Phosphoethanolamine N-m 99.8 2E-20 6.7E-25 164.4 12.3 151 106-272 54-204 (266)
28 2i62_A Nicotinamide N-methyltr 99.8 8E-20 2.7E-24 160.5 15.8 184 65-273 18-238 (265)
29 3dh0_A SAM dependent methyltra 99.8 1.2E-19 4.2E-24 154.8 15.7 143 107-273 37-180 (219)
30 1xxl_A YCGJ protein; structura 99.8 3.4E-20 1.2E-24 160.5 12.3 152 107-273 21-173 (239)
31 2g72_A Phenylethanolamine N-me 99.8 3.5E-19 1.2E-23 158.6 17.7 149 107-273 71-255 (289)
32 3ccf_A Cyclopropane-fatty-acyl 99.8 6E-20 2.1E-24 162.7 12.3 152 107-273 57-209 (279)
33 3e8s_A Putative SAM dependent 99.8 1.5E-19 5.2E-24 154.8 13.7 153 108-273 53-208 (227)
34 2o57_A Putative sarcosine dime 99.8 1.7E-19 5.8E-24 161.3 14.5 149 107-272 82-232 (297)
35 2yqz_A Hypothetical protein TT 99.8 6.8E-19 2.3E-23 154.3 18.0 151 107-271 39-193 (263)
36 4fsd_A Arsenic methyltransfera 99.8 8.6E-20 2.9E-24 168.9 12.7 159 107-275 83-252 (383)
37 1y8c_A S-adenosylmethionine-de 99.8 2.1E-19 7.2E-24 155.9 14.3 156 108-273 38-224 (246)
38 3gu3_A Methyltransferase; alph 99.8 1.2E-19 4.3E-24 161.1 12.8 159 107-273 22-189 (284)
39 2p35_A Trans-aconitate 2-methy 99.8 3.2E-19 1.1E-23 156.1 14.6 150 107-269 33-185 (259)
40 3jwh_A HEN1; methyltransferase 99.8 2.8E-19 9.6E-24 152.4 13.3 151 108-272 30-190 (217)
41 3bkw_A MLL3908 protein, S-aden 99.8 9.8E-19 3.4E-23 151.5 16.9 154 107-272 43-212 (243)
42 4hg2_A Methyltransferase type 99.8 1E-19 3.5E-24 158.6 10.4 100 108-223 40-139 (257)
43 3mgg_A Methyltransferase; NYSG 99.8 1.3E-19 4.6E-24 160.2 11.3 154 107-273 37-197 (276)
44 1nkv_A Hypothetical protein YJ 99.8 1.5E-19 5.3E-24 157.9 11.5 147 107-272 36-185 (256)
45 3thr_A Glycine N-methyltransfe 99.8 7.1E-19 2.4E-23 156.9 16.0 141 62-222 24-178 (293)
46 1vlm_A SAM-dependent methyltra 99.8 1E-18 3.6E-23 149.1 15.9 141 108-274 48-188 (219)
47 2pxx_A Uncharacterized protein 99.8 6.3E-19 2.1E-23 149.7 14.5 141 65-223 6-163 (215)
48 3bus_A REBM, methyltransferase 99.8 3.1E-19 1.1E-23 157.5 13.1 153 106-272 60-214 (273)
49 3bxo_A N,N-dimethyltransferase 99.8 3.8E-19 1.3E-23 153.7 12.9 102 108-222 41-144 (239)
50 3ege_A Putative methyltransfer 99.8 9.6E-20 3.3E-24 159.8 9.2 144 107-273 34-177 (261)
51 3jwg_A HEN1, methyltransferase 99.8 5.1E-19 1.7E-23 151.0 13.3 151 108-272 30-190 (219)
52 3ocj_A Putative exported prote 99.8 6.4E-19 2.2E-23 158.2 13.6 160 107-272 118-289 (305)
53 3cc8_A Putative methyltransfer 99.8 1.5E-18 5E-23 148.9 15.3 153 107-273 32-184 (230)
54 3hem_A Cyclopropane-fatty-acyl 99.8 2E-18 6.9E-23 154.7 16.7 157 106-272 71-241 (302)
55 3kkz_A Uncharacterized protein 99.8 8.8E-19 3E-23 154.2 13.9 147 107-272 46-194 (267)
56 2vdw_A Vaccinia virus capping 99.8 7E-19 2.4E-23 157.2 13.1 161 108-271 49-243 (302)
57 3ggd_A SAM-dependent methyltra 99.8 2.3E-19 7.8E-24 155.8 9.6 158 107-272 56-217 (245)
58 2xvm_A Tellurite resistance pr 99.8 5E-18 1.7E-22 142.4 17.4 139 108-273 33-172 (199)
59 3f4k_A Putative methyltransfer 99.8 1.7E-18 5.9E-23 151.3 14.7 143 107-271 46-193 (257)
60 3d2l_A SAM-dependent methyltra 99.8 3.4E-18 1.1E-22 148.1 16.2 154 108-273 34-222 (243)
61 3vc1_A Geranyl diphosphate 2-C 99.8 1.2E-18 4E-23 157.0 13.5 147 105-273 115-268 (312)
62 1kpg_A CFA synthase;, cyclopro 99.8 1.3E-18 4.6E-23 154.7 13.1 156 106-272 63-226 (287)
63 2aot_A HMT, histamine N-methyl 99.8 7.1E-19 2.4E-23 156.9 11.2 159 106-273 51-220 (292)
64 3dp7_A SAM-dependent methyltra 99.8 1E-18 3.5E-23 160.5 11.9 159 108-272 180-340 (363)
65 1ve3_A Hypothetical protein PH 99.8 7.4E-18 2.5E-22 144.4 16.6 106 108-221 39-144 (227)
66 3g07_A 7SK snRNA methylphospha 99.8 5.5E-19 1.9E-23 157.5 9.2 156 107-272 46-267 (292)
67 3i9f_A Putative type 11 methyl 99.8 2.1E-18 7.1E-23 141.2 11.6 129 108-272 18-146 (170)
68 2fk8_A Methoxy mycolic acid sy 99.8 5E-18 1.7E-22 153.2 14.6 156 106-272 89-252 (318)
69 3ofk_A Nodulation protein S; N 99.8 5.6E-18 1.9E-22 144.1 13.1 105 107-221 51-156 (216)
70 2gs9_A Hypothetical protein TT 99.8 2.7E-18 9.2E-23 145.6 10.8 135 107-265 36-171 (211)
71 3cgg_A SAM-dependent methyltra 99.8 1.9E-17 6.4E-22 138.1 15.0 127 108-273 47-174 (195)
72 3i53_A O-methyltransferase; CO 99.7 1.3E-17 4.5E-22 151.3 13.7 149 107-272 169-319 (332)
73 3bkx_A SAM-dependent methyltra 99.7 6.5E-18 2.2E-22 149.2 11.2 162 107-273 43-218 (275)
74 3iv6_A Putative Zn-dependent a 99.7 1.7E-17 5.9E-22 144.1 12.7 139 57-220 10-149 (261)
75 3m70_A Tellurite resistance pr 99.7 1.8E-17 6E-22 147.3 12.8 138 108-272 121-258 (286)
76 2avn_A Ubiquinone/menaquinone 99.7 6.6E-18 2.3E-22 148.0 9.8 148 108-272 55-211 (260)
77 3g5t_A Trans-aconitate 3-methy 99.7 9.4E-18 3.2E-22 150.1 10.2 105 108-220 37-150 (299)
78 3bgv_A MRNA CAP guanine-N7 met 99.7 2.3E-16 7.8E-21 142.0 17.9 112 108-222 35-158 (313)
79 1yzh_A TRNA (guanine-N(7)-)-me 99.7 7.5E-17 2.6E-21 137.0 13.6 133 108-273 42-181 (214)
80 3gwz_A MMCR; methyltransferase 99.7 4.6E-17 1.6E-21 149.8 12.7 151 107-272 202-354 (369)
81 2r3s_A Uncharacterized protein 99.7 3.8E-17 1.3E-21 148.4 11.9 155 107-272 165-321 (335)
82 4e2x_A TCAB9; kijanose, tetron 99.7 5.2E-18 1.8E-22 158.8 6.3 146 107-273 107-252 (416)
83 3mcz_A O-methyltransferase; ad 99.7 2.8E-17 9.6E-22 150.4 10.7 154 108-271 180-336 (352)
84 1xdz_A Methyltransferase GIDB; 99.7 2.8E-16 9.5E-21 135.9 15.6 182 50-272 15-200 (240)
85 1af7_A Chemotaxis receptor met 99.7 1.1E-16 3.7E-21 140.3 13.0 139 68-218 71-251 (274)
86 1x19_A CRTF-related protein; m 99.7 9.2E-17 3.1E-21 147.4 12.8 153 107-272 190-346 (359)
87 3evz_A Methyltransferase; NYSG 99.7 2E-16 6.9E-21 135.8 13.9 132 107-272 55-204 (230)
88 3reo_A (ISO)eugenol O-methyltr 99.7 4.7E-17 1.6E-21 149.6 10.5 150 107-273 203-354 (368)
89 2qe6_A Uncharacterized protein 99.7 1.2E-16 4.1E-21 140.7 12.6 151 108-270 78-238 (274)
90 1qzz_A RDMB, aclacinomycin-10- 99.7 1.5E-16 5.3E-21 146.7 13.7 153 107-273 182-338 (374)
91 3orh_A Guanidinoacetate N-meth 99.7 4.1E-17 1.4E-21 140.7 9.0 104 108-218 61-169 (236)
92 4df3_A Fibrillarin-like rRNA/T 99.7 1.6E-16 5.6E-21 135.1 12.3 142 104-272 74-215 (233)
93 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.8E-16 9.7E-21 129.2 13.4 128 107-275 25-154 (178)
94 3p9c_A Caffeic acid O-methyltr 99.7 5.7E-17 2E-21 148.8 10.0 149 107-272 201-351 (364)
95 3e05_A Precorrin-6Y C5,15-meth 99.7 7.8E-16 2.7E-20 129.7 15.9 120 107-266 40-160 (204)
96 3lst_A CALO1 methyltransferase 99.7 1E-16 3.4E-21 146.5 11.0 149 107-272 184-334 (348)
97 2ip2_A Probable phenazine-spec 99.7 1.1E-16 3.7E-21 145.5 11.1 150 109-272 169-320 (334)
98 1tw3_A COMT, carminomycin 4-O- 99.7 2E-16 6.7E-21 145.2 12.4 153 107-273 183-338 (360)
99 3m33_A Uncharacterized protein 99.7 2.1E-16 7.3E-21 135.4 11.3 117 108-273 49-166 (226)
100 3grz_A L11 mtase, ribosomal pr 99.7 2.7E-16 9.3E-21 132.6 11.7 123 108-273 61-184 (205)
101 1zx0_A Guanidinoacetate N-meth 99.7 1.2E-16 4E-21 137.9 9.5 108 108-220 61-171 (236)
102 2fca_A TRNA (guanine-N(7)-)-me 99.7 2.3E-16 7.9E-21 133.9 11.0 108 108-219 39-153 (213)
103 3htx_A HEN1; HEN1, small RNA m 99.7 1.6E-15 5.5E-20 147.5 17.5 158 108-271 722-895 (950)
104 3mti_A RRNA methylase; SAM-dep 99.7 1.9E-16 6.6E-21 131.2 9.7 108 107-221 22-137 (185)
105 3mq2_A 16S rRNA methyltransfer 99.7 3.1E-16 1.1E-20 133.6 10.0 146 108-273 28-183 (218)
106 4a6d_A Hydroxyindole O-methylt 99.7 2.8E-15 9.7E-20 136.9 16.9 151 108-272 180-332 (353)
107 3fpf_A Mtnas, putative unchara 99.7 1.5E-15 5.2E-20 133.1 14.3 103 105-220 120-223 (298)
108 3q87_B N6 adenine specific DNA 99.7 1E-15 3.5E-20 125.1 12.5 118 108-273 24-148 (170)
109 3njr_A Precorrin-6Y methylase; 99.7 1.8E-15 6.3E-20 127.4 14.3 125 107-275 55-181 (204)
110 1jsx_A Glucose-inhibited divis 99.7 1.8E-15 6.1E-20 127.7 14.1 153 47-219 10-165 (207)
111 3p2e_A 16S rRNA methylase; met 99.6 5.4E-16 1.8E-20 132.6 9.5 151 108-273 25-184 (225)
112 2zfu_A Nucleomethylin, cerebra 99.6 1.2E-15 4E-20 129.6 11.6 110 108-272 68-177 (215)
113 3giw_A Protein of unknown func 99.6 3.4E-16 1.2E-20 135.6 8.2 171 83-271 62-244 (277)
114 1fp2_A Isoflavone O-methyltran 99.6 5.1E-16 1.7E-20 142.0 9.8 145 108-273 189-340 (352)
115 2b3t_A Protein methyltransfera 99.6 2E-15 6.8E-20 133.3 12.7 128 108-272 110-261 (276)
116 1fp1_D Isoliquiritigenin 2'-O- 99.6 2.7E-16 9.2E-21 144.9 7.3 149 107-273 209-359 (372)
117 1fbn_A MJ fibrillarin homologu 99.6 3.1E-15 1.1E-19 128.5 13.4 137 107-272 74-211 (230)
118 3fzg_A 16S rRNA methylase; met 99.6 1.6E-16 5.6E-21 129.0 4.8 103 108-219 50-152 (200)
119 3dxy_A TRNA (guanine-N(7)-)-me 99.6 3.6E-16 1.2E-20 133.0 6.9 111 108-221 35-152 (218)
120 2nxc_A L11 mtase, ribosomal pr 99.6 1.2E-15 4E-20 133.1 9.8 122 108-272 121-242 (254)
121 3g89_A Ribosomal RNA small sub 99.6 6.4E-15 2.2E-19 127.9 14.1 130 107-272 80-210 (249)
122 1nt2_A Fibrillarin-like PRE-rR 99.6 2.7E-15 9.1E-20 126.9 11.3 106 106-219 56-161 (210)
123 3eey_A Putative rRNA methylase 99.6 2.3E-15 7.9E-20 126.0 10.3 110 108-221 23-141 (197)
124 1dus_A MJ0882; hypothetical pr 99.6 6.5E-15 2.2E-19 122.5 12.6 106 107-222 52-160 (194)
125 3ckk_A TRNA (guanine-N(7)-)-me 99.6 2.6E-15 9E-20 129.1 10.2 109 108-221 47-170 (235)
126 3dmg_A Probable ribosomal RNA 99.6 6.5E-15 2.2E-19 135.3 13.2 107 107-221 233-342 (381)
127 4dzr_A Protein-(glutamine-N5) 99.6 2.2E-16 7.6E-21 133.8 2.7 130 107-272 30-190 (215)
128 3p9n_A Possible methyltransfer 99.6 1.8E-15 6.3E-20 125.8 8.1 109 108-222 45-156 (189)
129 1yb2_A Hypothetical protein TA 99.6 3.4E-15 1.2E-19 131.7 9.7 126 105-272 108-235 (275)
130 1l3i_A Precorrin-6Y methyltran 99.6 9.1E-15 3.1E-19 121.4 11.5 123 107-271 33-157 (192)
131 3id6_C Fibrillarin-like rRNA/T 99.6 1.8E-14 6.1E-19 122.9 13.4 141 105-272 74-214 (232)
132 3u81_A Catechol O-methyltransf 99.6 1E-14 3.5E-19 124.4 11.9 110 108-221 59-172 (221)
133 1p91_A Ribosomal RNA large sub 99.6 3E-14 1E-18 125.2 15.2 99 108-225 86-184 (269)
134 2yxd_A Probable cobalt-precorr 99.6 1.3E-14 4.6E-19 119.5 12.3 120 107-272 35-155 (183)
135 3lpm_A Putative methyltransfer 99.6 1.7E-14 5.7E-19 126.2 13.3 132 107-273 49-200 (259)
136 2fyt_A Protein arginine N-meth 99.6 4.7E-15 1.6E-19 134.7 9.7 102 107-216 64-168 (340)
137 2frn_A Hypothetical protein PH 99.6 6E-14 2.1E-18 123.8 15.5 127 108-271 126-254 (278)
138 2pwy_A TRNA (adenine-N(1)-)-me 99.6 9.7E-15 3.3E-19 127.4 10.1 125 107-272 96-222 (258)
139 1zg3_A Isoflavanone 4'-O-methy 99.6 1.8E-14 6.1E-19 132.0 12.3 143 108-272 194-345 (358)
140 2ozv_A Hypothetical protein AT 99.6 4.4E-14 1.5E-18 123.5 13.9 110 108-219 37-170 (260)
141 3bwc_A Spermidine synthase; SA 99.6 1.5E-14 5E-19 129.4 11.0 136 108-272 96-238 (304)
142 3lec_A NADB-rossmann superfami 99.6 4.2E-14 1.5E-18 119.7 13.1 125 108-273 22-148 (230)
143 2ift_A Putative methylase HI07 99.6 5.5E-15 1.9E-19 124.2 7.4 106 108-221 54-165 (201)
144 3ntv_A MW1564 protein; rossman 99.5 8.7E-15 3E-19 125.8 8.7 103 108-220 72-177 (232)
145 1vbf_A 231AA long hypothetical 99.5 1.1E-14 3.6E-19 125.1 9.1 98 107-221 70-167 (231)
146 3q7e_A Protein arginine N-meth 99.5 1.3E-14 4.4E-19 132.3 10.0 103 108-218 67-172 (349)
147 3lbf_A Protein-L-isoaspartate 99.5 1.4E-14 4.9E-19 122.4 9.4 99 107-221 77-176 (210)
148 3kr9_A SAM-dependent methyltra 99.5 6.5E-14 2.2E-18 118.4 13.3 124 108-273 16-142 (225)
149 3uwp_A Histone-lysine N-methyl 99.5 9.3E-15 3.2E-19 132.8 8.2 109 105-222 171-291 (438)
150 3mb5_A SAM-dependent methyltra 99.5 1.7E-14 5.9E-19 125.7 9.5 124 107-272 93-220 (255)
151 2ipx_A RRNA 2'-O-methyltransfe 99.5 3.5E-14 1.2E-18 122.1 11.0 107 106-219 76-182 (233)
152 4dcm_A Ribosomal RNA large sub 99.5 3.6E-14 1.2E-18 130.2 11.8 107 107-220 222-335 (375)
153 3gnl_A Uncharacterized protein 99.5 6.1E-14 2.1E-18 119.7 12.3 124 108-272 22-147 (244)
154 3hp7_A Hemolysin, putative; st 99.5 1.1E-14 3.9E-19 127.7 8.0 162 107-293 85-248 (291)
155 1o54_A SAM-dependent O-methylt 99.5 3.2E-14 1.1E-18 125.6 10.5 125 106-272 111-237 (277)
156 3bzb_A Uncharacterized protein 99.5 3.4E-14 1.2E-18 125.7 10.5 136 108-272 80-235 (281)
157 4azs_A Methyltransferase WBDD; 99.5 9.9E-16 3.4E-20 148.5 0.4 107 108-220 67-174 (569)
158 3opn_A Putative hemolysin; str 99.5 3.1E-15 1.1E-19 128.2 3.5 141 108-273 38-183 (232)
159 1g8a_A Fibrillarin-like PRE-rR 99.5 6.4E-14 2.2E-18 119.9 11.7 106 106-218 72-177 (227)
160 2ld4_A Anamorsin; methyltransf 99.5 5.1E-14 1.7E-18 115.6 10.4 116 105-266 10-128 (176)
161 2pjd_A Ribosomal RNA small sub 99.5 1.5E-14 5.1E-19 131.7 7.6 106 108-221 197-305 (343)
162 3tfw_A Putative O-methyltransf 99.5 3.1E-14 1.1E-18 123.6 9.3 107 108-221 64-172 (248)
163 3sso_A Methyltransferase; macr 99.5 1.8E-14 6.3E-19 130.5 8.1 98 108-221 217-326 (419)
164 2b25_A Hypothetical protein; s 99.5 6.6E-14 2.3E-18 127.1 11.8 104 107-220 105-220 (336)
165 2fpo_A Methylase YHHF; structu 99.5 1.8E-14 6.2E-19 121.1 7.4 105 108-221 55-162 (202)
166 3dr5_A Putative O-methyltransf 99.5 1.5E-14 5.1E-19 123.3 6.8 105 108-220 57-164 (221)
167 2y1w_A Histone-arginine methyl 99.5 4.6E-14 1.6E-18 128.6 10.5 103 107-218 50-154 (348)
168 2esr_A Methyltransferase; stru 99.5 1.2E-14 4.2E-19 119.4 6.1 106 108-222 32-141 (177)
169 1ws6_A Methyltransferase; stru 99.5 7.7E-15 2.6E-19 119.7 4.7 107 108-222 42-150 (171)
170 3adn_A Spermidine synthase; am 99.5 3.5E-14 1.2E-18 125.9 9.2 107 108-219 84-198 (294)
171 1ixk_A Methyltransferase; open 99.5 9.5E-14 3.2E-18 124.7 12.1 135 106-271 117-272 (315)
172 2yxe_A Protein-L-isoaspartate 99.5 4E-14 1.4E-18 120.1 9.1 102 107-221 77-179 (215)
173 3r0q_C Probable protein argini 99.5 3.3E-14 1.1E-18 130.8 9.1 104 107-219 63-169 (376)
174 1i9g_A Hypothetical protein RV 99.5 5.5E-14 1.9E-18 124.3 9.9 103 107-221 99-205 (280)
175 2vdv_E TRNA (guanine-N(7)-)-me 99.5 7.9E-14 2.7E-18 120.9 10.7 108 107-219 49-173 (246)
176 1u2z_A Histone-lysine N-methyl 99.5 3.1E-14 1.1E-18 131.8 8.4 109 106-219 241-359 (433)
177 1o9g_A RRNA methyltransferase; 99.5 3.5E-14 1.2E-18 123.4 8.2 110 108-220 52-215 (250)
178 1wy7_A Hypothetical protein PH 99.5 4.6E-13 1.6E-17 112.8 14.8 124 107-271 49-172 (207)
179 2fhp_A Methylase, putative; al 99.5 7.3E-15 2.5E-19 121.7 3.6 109 108-222 45-157 (187)
180 2h00_A Methyltransferase 10 do 99.5 8.8E-15 3E-19 127.5 3.3 154 107-272 65-236 (254)
181 3gdh_A Trimethylguanosine synt 99.5 1.2E-15 4.2E-20 131.9 -2.2 100 108-218 79-180 (241)
182 1dl5_A Protein-L-isoaspartate 99.5 9.3E-14 3.2E-18 125.0 10.0 102 107-221 75-177 (317)
183 2gpy_A O-methyltransferase; st 99.5 5.1E-14 1.7E-18 121.0 7.7 103 108-220 55-161 (233)
184 2igt_A SAM dependent methyltra 99.5 1.3E-13 4.4E-18 124.4 10.7 107 108-220 154-273 (332)
185 1g6q_1 HnRNP arginine N-methyl 99.5 1.2E-13 3.9E-18 124.9 10.1 102 108-217 39-143 (328)
186 3duw_A OMT, O-methyltransferas 99.5 4.3E-14 1.5E-18 120.6 6.7 108 108-221 59-169 (223)
187 3c3p_A Methyltransferase; NP_9 99.5 5E-14 1.7E-18 119.1 6.9 103 108-220 57-161 (210)
188 1i1n_A Protein-L-isoaspartate 99.5 1E-13 3.5E-18 118.5 8.8 102 107-221 77-184 (226)
189 3tr6_A O-methyltransferase; ce 99.5 4.2E-14 1.4E-18 120.8 6.3 108 108-221 65-176 (225)
190 3r3h_A O-methyltransferase, SA 99.5 1.1E-14 3.9E-19 125.8 2.3 105 108-221 61-172 (242)
191 1ej0_A FTSJ; methyltransferase 99.5 6E-14 2E-18 114.8 6.3 100 107-221 22-138 (180)
192 3lcv_B Sisomicin-gentamicin re 99.5 9.2E-13 3.2E-17 112.0 13.2 139 108-273 133-271 (281)
193 2plw_A Ribosomal RNA methyltra 99.4 3.4E-13 1.2E-17 113.0 10.5 104 108-221 23-156 (201)
194 3b3j_A Histone-arginine methyl 99.4 1.2E-13 4E-18 130.7 8.5 103 107-218 158-262 (480)
195 1sui_A Caffeoyl-COA O-methyltr 99.4 9.1E-14 3.1E-18 120.5 6.5 104 108-220 80-191 (247)
196 3gjy_A Spermidine synthase; AP 99.4 1.7E-13 5.7E-18 121.7 8.0 109 108-220 90-201 (317)
197 2bm8_A Cephalosporin hydroxyla 99.4 1.2E-13 4.1E-18 118.9 6.6 102 108-220 82-188 (236)
198 3a27_A TYW2, uncharacterized p 99.4 4.2E-13 1.4E-17 118.0 10.1 102 107-221 119-221 (272)
199 2pbf_A Protein-L-isoaspartate 99.4 1.8E-13 6.3E-18 117.0 7.3 106 107-220 80-194 (227)
200 2i7c_A Spermidine synthase; tr 99.4 1.7E-13 5.9E-18 121.1 7.3 108 108-220 79-193 (283)
201 4dmg_A Putative uncharacterize 99.4 6.4E-13 2.2E-17 122.4 11.2 108 108-222 215-329 (393)
202 1jg1_A PIMT;, protein-L-isoasp 99.4 5.6E-13 1.9E-17 114.7 10.1 100 107-221 91-191 (235)
203 2b2c_A Spermidine synthase; be 99.4 1.3E-13 4.6E-18 123.2 6.3 106 108-219 109-222 (314)
204 3cbg_A O-methyltransferase; cy 99.4 1.3E-13 4.3E-18 118.5 5.9 108 108-221 73-184 (232)
205 1xj5_A Spermidine synthase 1; 99.4 3E-13 1E-17 122.0 8.3 108 108-219 121-235 (334)
206 2o07_A Spermidine synthase; st 99.4 1.7E-13 5.8E-18 122.2 6.5 109 108-221 96-211 (304)
207 2b78_A Hypothetical protein SM 99.4 3.3E-13 1.1E-17 124.4 8.6 111 108-221 213-333 (385)
208 2pt6_A Spermidine synthase; tr 99.4 2.3E-13 8E-18 122.3 7.4 108 108-221 117-232 (321)
209 2qm3_A Predicted methyltransfe 99.4 4.4E-12 1.5E-16 116.6 16.0 104 107-219 172-278 (373)
210 1iy9_A Spermidine synthase; ro 99.4 2.5E-13 8.6E-18 119.5 7.2 108 108-220 76-190 (275)
211 3tma_A Methyltransferase; thum 99.4 6.9E-13 2.3E-17 121.2 10.0 111 105-220 201-318 (354)
212 3c3y_A Pfomt, O-methyltransfer 99.4 3.7E-13 1.3E-17 116.0 7.6 107 108-220 71-182 (237)
213 1uir_A Polyamine aminopropyltr 99.4 2.6E-13 8.8E-18 121.8 6.8 107 108-219 78-195 (314)
214 3ajd_A Putative methyltransfer 99.4 4.6E-13 1.6E-17 117.9 8.3 115 107-222 83-214 (274)
215 1r18_A Protein-L-isoaspartate( 99.4 3.5E-13 1.2E-17 115.4 7.1 103 107-221 84-196 (227)
216 2hnk_A SAM-dependent O-methylt 99.4 9.1E-13 3.1E-17 113.6 9.4 107 108-220 61-182 (239)
217 2yxl_A PH0851 protein, 450AA l 99.4 4E-12 1.4E-16 119.7 14.4 115 105-222 257-392 (450)
218 1ne2_A Hypothetical protein TA 99.4 2.6E-12 8.8E-17 107.6 11.7 88 108-209 52-139 (200)
219 1inl_A Spermidine synthase; be 99.4 4.7E-13 1.6E-17 119.0 7.4 108 108-220 91-206 (296)
220 4hc4_A Protein arginine N-meth 99.4 1E-12 3.5E-17 119.8 9.6 101 108-217 84-187 (376)
221 1mjf_A Spermidine synthase; sp 99.4 3.7E-13 1.3E-17 118.9 6.2 105 108-219 76-193 (281)
222 3tm4_A TRNA (guanine N2-)-meth 99.4 3.1E-12 1.1E-16 117.6 12.5 125 107-271 217-349 (373)
223 2avd_A Catechol-O-methyltransf 99.4 3.1E-13 1.1E-17 115.7 5.4 107 108-220 70-180 (229)
224 2as0_A Hypothetical protein PH 99.4 8.8E-13 3E-17 122.3 8.6 110 108-222 218-338 (396)
225 2yvl_A TRMI protein, hypotheti 99.4 2E-12 6.7E-17 112.0 10.3 100 107-221 91-192 (248)
226 3frh_A 16S rRNA methylase; met 99.4 1.4E-12 4.9E-17 109.8 8.8 101 107-218 105-205 (253)
227 1nv8_A HEMK protein; class I a 99.4 2E-12 6.7E-17 114.3 10.1 101 108-218 124-248 (284)
228 3k6r_A Putative transferase PH 99.3 1.1E-11 3.7E-16 108.4 13.4 128 107-271 125-254 (278)
229 3c0k_A UPF0064 protein YCCW; P 99.3 2.2E-12 7.4E-17 119.7 9.5 109 108-221 221-341 (396)
230 3m6w_A RRNA methylase; rRNA me 99.3 2.1E-12 7.1E-17 120.8 9.3 113 106-222 100-232 (464)
231 3dou_A Ribosomal RNA large sub 99.3 2.8E-12 9.5E-17 106.6 8.5 101 107-221 25-141 (191)
232 3v97_A Ribosomal RNA large sub 99.3 1.8E-12 6.3E-17 127.9 8.5 106 108-221 540-659 (703)
233 1wxx_A TT1595, hypothetical pr 99.3 2E-12 6.8E-17 119.3 7.4 108 108-221 210-327 (382)
234 1sqg_A SUN protein, FMU protei 99.3 5.7E-12 2E-16 118.0 10.5 114 105-222 244-377 (429)
235 1zq9_A Probable dimethyladenos 99.3 3.5E-12 1.2E-16 112.8 8.0 99 107-216 28-144 (285)
236 3m4x_A NOL1/NOP2/SUN family pr 99.3 3.4E-12 1.2E-16 119.2 8.3 114 105-222 103-237 (456)
237 2nyu_A Putative ribosomal RNA 99.3 4.5E-12 1.6E-16 105.6 8.2 104 108-222 23-148 (196)
238 2wa2_A Non-structural protein 99.3 8.4E-13 2.9E-17 115.9 3.5 102 107-221 82-195 (276)
239 2frx_A Hypothetical protein YE 99.3 7.9E-12 2.7E-16 118.0 9.5 111 107-222 117-249 (479)
240 2oxt_A Nucleoside-2'-O-methylt 99.3 1.2E-12 4.1E-17 114.2 3.4 102 107-221 74-187 (265)
241 2f8l_A Hypothetical protein LM 99.3 3.2E-11 1.1E-15 109.7 12.8 108 108-220 131-257 (344)
242 2yx1_A Hypothetical protein MJ 99.3 1.3E-11 4.6E-16 111.7 10.1 97 107-221 195-293 (336)
243 2cmg_A Spermidine synthase; tr 99.3 7.6E-12 2.6E-16 109.0 7.3 94 108-219 73-171 (262)
244 2xyq_A Putative 2'-O-methyl tr 99.2 2.2E-11 7.4E-16 107.1 9.3 117 107-272 63-195 (290)
245 1uwv_A 23S rRNA (uracil-5-)-me 99.2 1.4E-10 4.9E-15 108.5 14.7 102 107-218 286-388 (433)
246 2p41_A Type II methyltransfera 99.2 9.5E-12 3.2E-16 110.8 5.4 103 107-222 82-194 (305)
247 2h1r_A Dimethyladenosine trans 99.2 6.5E-11 2.2E-15 105.3 10.4 94 79-191 23-117 (299)
248 2jjq_A Uncharacterized RNA met 99.1 2.5E-10 8.5E-15 106.3 11.3 97 108-219 291-387 (425)
249 3b5i_A S-adenosyl-L-methionine 99.1 7.9E-10 2.7E-14 100.5 13.9 164 108-273 53-297 (374)
250 3gru_A Dimethyladenosine trans 99.1 2.9E-10 9.8E-15 100.4 10.5 94 79-190 31-124 (295)
251 1yub_A Ermam, rRNA methyltrans 99.1 6.1E-12 2.1E-16 108.9 -0.6 102 107-219 29-145 (245)
252 1qam_A ERMC' methyltransferase 99.1 2.3E-10 7.9E-15 98.8 8.7 58 107-169 30-87 (244)
253 2okc_A Type I restriction enzy 99.1 4.6E-10 1.6E-14 105.6 11.3 108 108-220 172-308 (445)
254 2efj_A 3,7-dimethylxanthine me 99.1 1.6E-09 5.4E-14 98.6 12.9 163 108-273 53-291 (384)
255 3tqs_A Ribosomal RNA small sub 99.0 8.3E-10 2.9E-14 95.5 9.8 94 79-187 10-103 (255)
256 2qfm_A Spermine synthase; sper 99.0 2E-10 6.8E-15 103.2 5.8 111 107-220 188-315 (364)
257 3k0b_A Predicted N6-adenine-sp 99.0 7.4E-10 2.5E-14 102.0 9.1 113 105-222 199-353 (393)
258 3ldg_A Putative uncharacterize 99.0 1.6E-09 5.5E-14 99.3 11.2 113 105-222 192-346 (384)
259 2ih2_A Modification methylase 99.0 5.9E-10 2E-14 104.1 8.0 100 108-221 40-166 (421)
260 2dul_A N(2),N(2)-dimethylguano 99.0 2.7E-10 9.2E-15 104.3 5.4 101 108-219 48-164 (378)
261 2b9e_A NOL1/NOP2/SUN domain fa 99.0 2.2E-09 7.5E-14 95.6 11.1 114 106-222 101-237 (309)
262 3ldu_A Putative methylase; str 99.0 1.3E-09 4.5E-14 100.2 9.7 113 105-222 193-347 (385)
263 3bt7_A TRNA (uracil-5-)-methyl 99.0 4E-10 1.4E-14 103.3 5.1 103 108-222 214-329 (369)
264 3fut_A Dimethyladenosine trans 98.9 2.4E-09 8.2E-14 93.3 9.1 105 79-204 28-133 (271)
265 1m6e_X S-adenosyl-L-methionnin 98.9 5.1E-09 1.7E-13 94.4 11.3 164 108-273 52-279 (359)
266 3axs_A Probable N(2),N(2)-dime 98.9 1.2E-09 4E-14 100.1 5.8 101 108-219 53-158 (392)
267 3ftd_A Dimethyladenosine trans 98.9 4.8E-09 1.7E-13 90.5 9.2 77 79-170 12-88 (249)
268 1m6y_A S-adenosyl-methyltransf 98.9 1.6E-09 5.3E-14 96.0 5.5 80 107-188 26-106 (301)
269 3uzu_A Ribosomal RNA small sub 98.8 9.8E-09 3.4E-13 90.0 7.5 80 79-170 23-102 (279)
270 2ar0_A M.ecoki, type I restric 98.8 1E-08 3.5E-13 98.4 7.8 111 107-220 169-313 (541)
271 2r6z_A UPF0341 protein in RSP 98.8 2.2E-09 7.4E-14 93.2 2.7 76 108-190 84-171 (258)
272 1qyr_A KSGA, high level kasuga 98.8 7.2E-09 2.5E-13 89.5 5.7 77 79-169 2-78 (252)
273 3evf_A RNA-directed RNA polyme 98.7 1E-08 3.5E-13 87.8 6.4 109 107-222 74-187 (277)
274 3o4f_A Spermidine synthase; am 98.7 4.8E-08 1.6E-12 85.4 10.1 107 108-219 84-198 (294)
275 3v97_A Ribosomal RNA large sub 98.7 4.3E-08 1.5E-12 96.8 10.7 114 106-221 189-349 (703)
276 4gqb_A Protein arginine N-meth 98.7 4.9E-08 1.7E-12 94.2 10.7 104 108-217 358-465 (637)
277 3lkd_A Type I restriction-modi 98.7 2E-07 6.9E-12 89.0 14.6 114 107-221 221-360 (542)
278 2qy6_A UPF0209 protein YFCK; s 98.7 1.6E-08 5.5E-13 87.5 6.2 127 108-271 61-232 (257)
279 3ll7_A Putative methyltransfer 98.7 6.1E-09 2.1E-13 95.6 3.3 72 108-186 94-169 (410)
280 3khk_A Type I restriction-modi 98.7 5.6E-08 1.9E-12 93.1 9.7 109 109-220 246-396 (544)
281 3cvo_A Methyltransferase-like 98.7 1.5E-07 5E-12 77.9 11.0 100 108-219 31-154 (202)
282 3ua3_A Protein arginine N-meth 98.6 2.2E-08 7.4E-13 96.5 4.1 106 108-217 410-532 (745)
283 4fzv_A Putative methyltransfer 98.5 1.3E-07 4.5E-12 85.4 6.8 115 104-223 145-288 (359)
284 2oyr_A UPF0341 protein YHIQ; a 98.5 3E-08 1E-12 85.6 2.0 93 109-211 90-192 (258)
285 3gcz_A Polyprotein; flavivirus 98.5 6.3E-08 2.2E-12 83.1 3.3 108 107-221 90-203 (282)
286 3s1s_A Restriction endonucleas 98.4 5.4E-07 1.8E-11 88.2 9.2 112 107-221 321-467 (878)
287 2k4m_A TR8_protein, UPF0146 pr 98.4 3E-07 1E-11 70.7 5.3 86 108-220 36-122 (153)
288 2wk1_A NOVP; transferase, O-me 98.4 4.6E-07 1.6E-11 79.0 6.5 107 108-220 107-245 (282)
289 4auk_A Ribosomal RNA large sub 98.3 6.8E-06 2.3E-10 73.8 11.4 95 106-217 210-304 (375)
290 3eld_A Methyltransferase; flav 98.3 1.2E-06 4E-11 75.7 6.1 108 107-221 81-193 (300)
291 3c6k_A Spermine synthase; sper 98.2 5.2E-07 1.8E-11 81.4 3.7 110 107-219 205-331 (381)
292 3tka_A Ribosomal RNA small sub 98.2 3.9E-06 1.3E-10 74.1 7.8 77 106-186 56-134 (347)
293 1wg8_A Predicted S-adenosylmet 98.1 2.9E-06 9.8E-11 73.2 5.6 75 107-188 22-97 (285)
294 3ufb_A Type I restriction-modi 98.0 2.4E-05 8.4E-10 74.7 10.1 114 107-220 217-363 (530)
295 2px2_A Genome polyprotein [con 97.9 1.1E-05 3.9E-10 68.0 5.5 103 106-221 72-185 (269)
296 3p8z_A Mtase, non-structural p 97.9 2E-05 6.7E-10 65.5 6.2 108 107-224 78-191 (267)
297 1rjd_A PPM1P, carboxy methyl t 97.9 3.8E-05 1.3E-09 68.8 8.7 149 108-267 98-281 (334)
298 2zig_A TTHA0409, putative modi 97.8 1.8E-05 6.1E-10 70.0 5.4 45 107-155 235-279 (297)
299 3lkz_A Non-structural protein 97.8 9.4E-05 3.2E-09 63.6 8.8 107 107-223 94-208 (321)
300 3vyw_A MNMC2; tRNA wobble urid 97.5 0.001 3.4E-08 58.3 11.3 128 108-271 97-245 (308)
301 3r24_A NSP16, 2'-O-methyl tran 97.4 0.00038 1.3E-08 59.7 7.6 98 105-221 107-219 (344)
302 2vz8_A Fatty acid synthase; tr 97.4 5.1E-05 1.8E-09 84.7 2.7 150 107-271 1240-1392(2512)
303 2uyo_A Hypothetical protein ML 97.3 0.0028 9.6E-08 56.0 12.3 109 108-221 103-220 (310)
304 1i4w_A Mitochondrial replicati 97.2 0.0011 3.8E-08 59.6 8.4 84 79-169 33-116 (353)
305 1g60_A Adenine-specific methyl 97.1 0.00056 1.9E-08 59.1 5.2 45 107-155 212-256 (260)
306 2oo3_A Protein involved in cat 96.9 0.00041 1.4E-08 59.9 2.5 104 108-218 92-197 (283)
307 3tos_A CALS11; methyltransfera 96.7 0.0071 2.4E-07 51.7 8.8 107 108-221 70-219 (257)
308 3g7u_A Cytosine-specific methy 96.5 0.04 1.4E-06 50.0 13.2 72 109-188 3-79 (376)
309 3ps9_A TRNA 5-methylaminomethy 96.4 0.0059 2E-07 60.2 7.4 110 108-217 67-217 (676)
310 2c7p_A Modification methylase 96.3 0.064 2.2E-06 47.7 12.8 68 108-188 11-79 (327)
311 3iei_A Leucine carboxyl methyl 96.2 0.053 1.8E-06 48.3 12.1 156 108-271 91-278 (334)
312 1g55_A DNA cytosine methyltran 96.1 0.017 5.7E-07 51.9 8.2 76 108-189 2-77 (343)
313 3pvc_A TRNA 5-methylaminomethy 96.1 0.012 4.1E-07 58.1 7.9 131 108-271 59-230 (689)
314 3fwz_A Inner membrane protein 95.7 0.02 6.9E-07 44.0 6.3 99 108-219 7-105 (140)
315 1boo_A Protein (N-4 cytosine-s 95.6 0.0054 1.9E-07 54.6 2.7 47 107-157 252-298 (323)
316 2py6_A Methyltransferase FKBM; 94.9 0.05 1.7E-06 50.0 6.9 63 105-168 224-292 (409)
317 2dph_A Formaldehyde dismutase; 94.7 0.078 2.7E-06 48.5 7.8 101 107-218 185-298 (398)
318 3qv2_A 5-cytosine DNA methyltr 94.7 0.15 5E-06 45.3 9.3 74 108-188 10-84 (327)
319 3ubt_Y Modification methylase 94.6 0.26 9E-06 43.6 10.8 130 109-273 1-142 (331)
320 3two_A Mannitol dehydrogenase; 94.5 0.086 2.9E-06 47.2 7.5 90 106-219 175-265 (348)
321 3s2e_A Zinc-containing alcohol 94.5 0.03 1E-06 50.0 4.4 96 106-219 165-263 (340)
322 1f8f_A Benzyl alcohol dehydrog 94.4 0.033 1.1E-06 50.5 4.5 97 105-219 188-289 (371)
323 1eg2_A Modification methylase 94.1 0.042 1.4E-06 48.7 4.3 45 107-155 242-289 (319)
324 1uuf_A YAHK, zinc-type alcohol 94.0 0.042 1.4E-06 49.8 4.4 93 107-218 194-287 (369)
325 1kol_A Formaldehyde dehydrogen 94.0 0.21 7.2E-06 45.5 9.1 101 107-218 185-299 (398)
326 4h0n_A DNMT2; SAH binding, tra 94.0 0.16 5.5E-06 45.2 8.0 75 108-188 3-77 (333)
327 1pl8_A Human sorbitol dehydrog 93.9 0.22 7.4E-06 44.7 8.7 95 107-219 171-273 (356)
328 2zig_A TTHA0409, putative modi 93.8 0.098 3.3E-06 45.8 6.2 96 159-272 21-134 (297)
329 3llv_A Exopolyphosphatase-rela 93.8 0.17 5.7E-06 38.6 6.9 98 108-219 6-103 (141)
330 3oig_A Enoyl-[acyl-carrier-pro 93.8 0.43 1.5E-05 40.6 10.2 112 108-219 7-147 (266)
331 4ej6_A Putative zinc-binding d 93.5 0.21 7.2E-06 45.1 8.1 95 107-219 182-284 (370)
332 1pqw_A Polyketide synthase; ro 93.4 0.081 2.8E-06 43.0 4.7 93 107-218 38-136 (198)
333 3me5_A Cytosine-specific methy 93.3 0.68 2.3E-05 43.3 11.3 58 107-169 87-145 (482)
334 1e3j_A NADP(H)-dependent ketos 93.3 0.15 5.1E-06 45.7 6.7 95 107-219 168-271 (352)
335 1v3u_A Leukotriene B4 12- hydr 93.2 0.31 1E-05 43.2 8.5 94 106-218 144-243 (333)
336 2qrv_A DNA (cytosine-5)-methyl 93.1 0.092 3.2E-06 45.9 4.7 72 107-187 15-90 (295)
337 2zwa_A Leucine carboxyl methyl 92.8 0.49 1.7E-05 46.6 10.1 155 108-271 108-306 (695)
338 3fpc_A NADP-dependent alcohol 92.8 0.076 2.6E-06 47.6 3.9 96 106-219 165-266 (352)
339 3pxx_A Carveol dehydrogenase; 92.7 1 3.5E-05 38.7 11.0 110 108-218 10-152 (287)
340 3m6i_A L-arabinitol 4-dehydrog 92.5 0.38 1.3E-05 43.2 8.2 98 107-219 179-283 (363)
341 1lss_A TRK system potassium up 92.4 0.39 1.3E-05 36.1 7.0 98 108-218 4-101 (140)
342 3iht_A S-adenosyl-L-methionine 92.4 0.079 2.7E-06 40.9 2.8 101 108-219 41-147 (174)
343 3l9w_A Glutathione-regulated p 92.1 0.2 6.7E-06 46.1 5.7 103 108-223 4-106 (413)
344 3c85_A Putative glutathione-re 92.1 0.38 1.3E-05 38.4 6.9 99 108-219 39-139 (183)
345 3uog_A Alcohol dehydrogenase; 91.8 0.69 2.4E-05 41.5 9.0 96 105-219 187-287 (363)
346 1wma_A Carbonyl reductase [NAD 91.7 0.65 2.2E-05 39.4 8.4 110 108-218 4-137 (276)
347 1rjw_A ADH-HT, alcohol dehydro 91.6 0.22 7.5E-06 44.3 5.4 95 107-219 164-261 (339)
348 4b7c_A Probable oxidoreductase 91.6 0.12 4E-06 46.0 3.6 95 106-218 148-247 (336)
349 1piw_A Hypothetical zinc-type 91.6 0.061 2.1E-06 48.5 1.7 95 107-218 179-275 (360)
350 3ek2_A Enoyl-(acyl-carrier-pro 91.4 0.82 2.8E-05 38.8 8.8 113 106-219 12-153 (271)
351 2j3h_A NADP-dependent oxidored 91.3 0.68 2.3E-05 41.1 8.3 96 105-218 153-254 (345)
352 1cdo_A Alcohol dehydrogenase; 91.3 0.65 2.2E-05 41.8 8.3 96 106-219 191-294 (374)
353 2h6e_A ADH-4, D-arabinose 1-de 91.2 0.26 8.9E-06 43.9 5.5 94 107-218 170-268 (344)
354 1zkd_A DUF185; NESG, RPR58, st 91.2 0.97 3.3E-05 40.9 9.1 78 108-194 81-163 (387)
355 2d8a_A PH0655, probable L-thre 91.1 0.19 6.5E-06 44.9 4.5 95 107-219 167-267 (348)
356 3uko_A Alcohol dehydrogenase c 91.1 0.13 4.3E-06 46.7 3.4 96 106-219 192-295 (378)
357 2eih_A Alcohol dehydrogenase; 91.1 0.43 1.5E-05 42.5 6.8 94 106-218 165-264 (343)
358 1jvb_A NAD(H)-dependent alcoho 91.0 0.21 7.2E-06 44.6 4.7 95 107-218 170-270 (347)
359 2jhf_A Alcohol dehydrogenase E 91.0 0.92 3.1E-05 40.8 9.0 96 106-219 190-293 (374)
360 2ae2_A Protein (tropinone redu 90.9 2 6.8E-05 36.3 10.6 81 108-189 9-96 (260)
361 1id1_A Putative potassium chan 90.9 0.44 1.5E-05 36.8 5.9 102 108-219 3-105 (153)
362 2g1u_A Hypothetical protein TM 90.7 0.39 1.3E-05 37.2 5.4 100 107-219 18-118 (155)
363 2fzw_A Alcohol dehydrogenase c 90.5 0.76 2.6E-05 41.3 8.0 97 105-219 188-292 (373)
364 3ip1_A Alcohol dehydrogenase, 90.5 0.44 1.5E-05 43.5 6.4 101 105-219 211-318 (404)
365 1p0f_A NADP-dependent alcohol 90.5 0.83 2.8E-05 41.1 8.2 96 106-219 190-293 (373)
366 3grk_A Enoyl-(acyl-carrier-pro 90.4 2.7 9.4E-05 36.2 11.2 112 107-219 30-169 (293)
367 1vj0_A Alcohol dehydrogenase, 90.3 0.98 3.3E-05 40.8 8.6 96 107-219 195-298 (380)
368 1e3i_A Alcohol dehydrogenase, 90.3 0.9 3.1E-05 40.9 8.3 96 106-219 194-297 (376)
369 3ius_A Uncharacterized conserv 90.3 2.6 8.9E-05 35.9 11.0 86 108-207 5-90 (286)
370 3goh_A Alcohol dehydrogenase, 90.1 0.29 9.8E-06 43.0 4.7 87 106-218 141-228 (315)
371 3l4b_C TRKA K+ channel protien 90.1 0.3 1E-05 40.3 4.6 100 110-221 2-101 (218)
372 3edm_A Short chain dehydrogena 90.1 1.5 5E-05 37.2 9.1 110 108-218 8-142 (259)
373 1yb5_A Quinone oxidoreductase; 90.1 1.4 4.8E-05 39.2 9.3 95 106-219 169-269 (351)
374 2dq4_A L-threonine 3-dehydroge 90.0 0.17 5.7E-06 45.2 3.1 93 107-218 164-261 (343)
375 4dvj_A Putative zinc-dependent 90.0 0.2 6.8E-06 45.1 3.6 95 107-218 171-269 (363)
376 2b5w_A Glucose dehydrogenase; 90.0 0.43 1.5E-05 42.7 5.8 90 109-218 174-272 (357)
377 3is3_A 17BETA-hydroxysteroid d 89.8 2.6 8.9E-05 35.8 10.5 112 107-219 17-152 (270)
378 3ijr_A Oxidoreductase, short c 89.8 2.5 8.6E-05 36.4 10.4 111 107-218 46-181 (291)
379 3o26_A Salutaridine reductase; 89.6 1.6 5.5E-05 37.7 9.1 82 108-190 12-101 (311)
380 1boo_A Protein (N-4 cytosine-s 89.5 0.54 1.8E-05 41.5 5.9 58 158-219 13-84 (323)
381 4fgs_A Probable dehydrogenase 89.4 2.1 7.1E-05 36.7 9.4 107 108-218 29-158 (273)
382 4eso_A Putative oxidoreductase 89.4 2.1 7.2E-05 36.1 9.5 107 108-218 8-137 (255)
383 3nx4_A Putative oxidoreductase 89.4 0.89 3E-05 39.9 7.3 90 110-218 149-240 (324)
384 3gms_A Putative NADPH:quinone 89.2 0.23 7.9E-06 44.2 3.3 96 105-219 142-243 (340)
385 2aef_A Calcium-gated potassium 89.1 1.3 4.6E-05 36.7 7.9 101 108-223 9-109 (234)
386 3r3s_A Oxidoreductase; structu 89.0 2 6.8E-05 37.2 9.2 111 107-218 48-184 (294)
387 2h7i_A Enoyl-[acyl-carrier-pro 88.9 1.2 4E-05 38.0 7.6 109 108-219 7-148 (269)
388 3ggo_A Prephenate dehydrogenas 88.7 2.1 7.2E-05 37.5 9.2 92 108-217 33-126 (314)
389 2c0c_A Zinc binding alcohol de 88.7 0.4 1.4E-05 43.1 4.6 93 107-218 163-260 (362)
390 1xa0_A Putative NADPH dependen 88.3 0.64 2.2E-05 41.0 5.6 90 110-218 152-245 (328)
391 3k31_A Enoyl-(acyl-carrier-pro 88.1 2.9 0.0001 36.1 9.7 111 108-219 30-168 (296)
392 3ksu_A 3-oxoacyl-acyl carrier 88.1 4.3 0.00015 34.3 10.6 110 108-218 11-146 (262)
393 3qwb_A Probable quinone oxidor 88.1 0.44 1.5E-05 42.2 4.4 94 107-219 148-247 (334)
394 1ej6_A Lambda2; icosahedral, n 88.0 1.5 5.2E-05 44.2 8.2 144 108-263 822-972 (1289)
395 1qor_A Quinone oxidoreductase; 87.9 0.44 1.5E-05 42.0 4.3 94 107-219 140-239 (327)
396 4fn4_A Short chain dehydrogena 87.9 0.97 3.3E-05 38.4 6.2 81 108-189 7-93 (254)
397 1yqd_A Sinapyl alcohol dehydro 87.5 0.54 1.8E-05 42.3 4.6 95 107-219 187-282 (366)
398 3fbg_A Putative arginate lyase 87.4 0.28 9.6E-06 43.8 2.7 94 107-218 150-247 (346)
399 2zb4_A Prostaglandin reductase 87.2 2.3 7.8E-05 37.8 8.6 94 107-218 158-259 (357)
400 4eez_A Alcohol dehydrogenase 1 87.1 0.45 1.5E-05 42.3 3.9 96 106-219 162-263 (348)
401 2hmt_A YUAA protein; RCK, KTN, 87.0 1.3 4.5E-05 33.2 6.1 97 108-218 6-103 (144)
402 3jyn_A Quinone oxidoreductase; 86.9 0.37 1.3E-05 42.6 3.1 95 106-219 139-239 (325)
403 2cdc_A Glucose dehydrogenase g 86.7 0.5 1.7E-05 42.4 4.0 91 108-219 181-278 (366)
404 3swr_A DNA (cytosine-5)-methyl 86.7 9.3 0.00032 39.0 13.5 53 107-167 539-593 (1002)
405 2j8z_A Quinone oxidoreductase; 86.7 2.7 9.1E-05 37.4 8.8 95 106-219 161-261 (354)
406 4eye_A Probable oxidoreductase 86.7 0.3 1E-05 43.5 2.5 95 106-219 158-257 (342)
407 3v2g_A 3-oxoacyl-[acyl-carrier 86.7 6.5 0.00022 33.4 10.9 110 108-218 31-164 (271)
408 2pd4_A Enoyl-[acyl-carrier-pro 86.6 2.6 8.8E-05 35.9 8.3 111 108-219 6-144 (275)
409 2gdz_A NAD+-dependent 15-hydro 86.5 4.1 0.00014 34.4 9.5 82 108-190 7-96 (267)
410 1tt7_A YHFP; alcohol dehydroge 86.4 0.65 2.2E-05 41.0 4.5 92 110-218 153-246 (330)
411 1wly_A CAAR, 2-haloacrylate re 86.2 1 3.6E-05 39.7 5.8 94 107-219 145-244 (333)
412 3ew7_A LMO0794 protein; Q8Y8U8 86.2 1.5 5E-05 35.7 6.4 98 110-218 2-101 (221)
413 4dup_A Quinone oxidoreductase; 86.1 0.37 1.3E-05 43.1 2.8 95 106-219 166-265 (353)
414 2hwk_A Helicase NSP2; rossman 86.0 0.59 2E-05 39.9 3.7 97 115-222 149-257 (320)
415 2cf5_A Atccad5, CAD, cinnamyl 86.0 0.48 1.6E-05 42.4 3.4 94 107-218 180-274 (357)
416 4g65_A TRK system potassium up 85.6 0.43 1.5E-05 44.5 3.0 72 108-186 3-74 (461)
417 1lnq_A MTHK channels, potassiu 85.6 1.5 5.2E-05 38.7 6.5 101 108-223 115-215 (336)
418 3qiv_A Short-chain dehydrogena 85.4 1.6 5.5E-05 36.6 6.3 82 108-190 9-96 (253)
419 4a2c_A Galactitol-1-phosphate 85.3 1.1 3.7E-05 39.8 5.4 96 106-219 159-260 (346)
420 3h7a_A Short chain dehydrogena 84.7 1.1 3.7E-05 37.8 4.9 81 108-190 7-93 (252)
421 3ucx_A Short chain dehydrogena 84.6 2.2 7.7E-05 36.1 6.9 80 108-188 11-96 (264)
422 1hdc_A 3-alpha, 20 beta-hydrox 84.2 4.6 0.00016 33.8 8.7 78 108-189 5-88 (254)
423 1qsg_A Enoyl-[acyl-carrier-pro 84.1 2.8 9.4E-05 35.5 7.3 79 108-190 9-97 (265)
424 3imf_A Short chain dehydrogena 84.0 1.9 6.4E-05 36.4 6.1 81 108-189 6-92 (257)
425 4f6c_A AUSA reductase domain p 83.9 4 0.00014 37.2 8.8 79 108-189 69-159 (427)
426 3u5t_A 3-oxoacyl-[acyl-carrier 83.9 3.2 0.00011 35.2 7.6 111 108-219 27-161 (267)
427 1yb1_A 17-beta-hydroxysteroid 83.8 2 6.8E-05 36.6 6.3 82 108-190 31-118 (272)
428 1fmc_A 7 alpha-hydroxysteroid 83.7 2 7E-05 35.8 6.3 81 108-189 11-97 (255)
429 3e8x_A Putative NAD-dependent 83.6 2.5 8.5E-05 34.9 6.7 73 108-190 21-94 (236)
430 3rkr_A Short chain oxidoreduct 83.6 1.6 5.4E-05 37.0 5.5 82 108-190 29-116 (262)
431 3iyl_W VP1; non-enveloped viru 83.5 2.2 7.4E-05 43.5 6.9 151 108-271 828-986 (1299)
432 1ae1_A Tropinone reductase-I; 83.4 6.9 0.00023 33.2 9.6 61 108-169 21-81 (273)
433 3lyl_A 3-oxoacyl-(acyl-carrier 83.3 1.8 6.1E-05 36.1 5.7 82 108-190 5-92 (247)
434 3awd_A GOX2181, putative polyo 83.3 2.2 7.5E-05 35.8 6.3 81 108-189 13-99 (260)
435 3krt_A Crotonyl COA reductase; 83.1 3.4 0.00012 38.2 8.0 95 105-218 226-343 (456)
436 3tjr_A Short chain dehydrogena 83.1 2.2 7.5E-05 37.0 6.3 82 108-190 31-118 (301)
437 2p91_A Enoyl-[acyl-carrier-pro 83.0 6.4 0.00022 33.6 9.3 81 108-189 21-108 (285)
438 3sju_A Keto reductase; short-c 82.8 2.2 7.6E-05 36.5 6.2 82 108-190 24-111 (279)
439 1e7w_A Pteridine reductase; di 82.7 7.3 0.00025 33.4 9.5 62 108-170 9-72 (291)
440 1g60_A Adenine-specific methyl 82.6 2.3 7.9E-05 36.0 6.1 22 197-218 52-73 (260)
441 4hp8_A 2-deoxy-D-gluconate 3-d 82.5 6.3 0.00021 33.2 8.7 79 108-189 9-88 (247)
442 3tfo_A Putative 3-oxoacyl-(acy 82.5 1.8 6E-05 36.9 5.4 82 108-190 4-91 (264)
443 3v8b_A Putative dehydrogenase, 82.5 2.6 8.8E-05 36.2 6.5 82 108-190 28-115 (283)
444 1g0o_A Trihydroxynaphthalene r 81.6 11 0.00037 32.1 10.2 110 108-218 29-162 (283)
445 3gpi_A NAD-dependent epimerase 81.3 2.9 9.9E-05 35.7 6.4 71 108-190 3-73 (286)
446 2jah_A Clavulanic acid dehydro 81.2 3 0.0001 34.8 6.3 81 108-189 7-93 (247)
447 3h2s_A Putative NADH-flavin re 81.1 3.9 0.00013 33.2 6.9 99 110-218 2-103 (224)
448 2eez_A Alanine dehydrogenase; 81.0 0.45 1.5E-05 42.9 1.1 101 107-218 165-265 (369)
449 3ic5_A Putative saccharopine d 80.8 4 0.00014 29.1 6.2 72 108-188 5-77 (118)
450 3gaf_A 7-alpha-hydroxysteroid 80.5 2.3 7.9E-05 35.8 5.4 82 108-190 12-99 (256)
451 1zcj_A Peroxisomal bifunctiona 80.0 8.7 0.0003 35.6 9.5 98 108-219 37-150 (463)
452 1mxh_A Pteridine reductase 2; 80.0 5.6 0.00019 33.7 7.8 82 108-190 11-104 (276)
453 4ft4_B DNA (cytosine-5)-methyl 80.0 17 0.00057 36.2 12.2 47 107-153 211-260 (784)
454 3t7c_A Carveol dehydrogenase; 79.8 3.8 0.00013 35.4 6.7 82 107-189 27-126 (299)
455 4fs3_A Enoyl-[acyl-carrier-pro 79.7 3.7 0.00013 34.6 6.4 82 107-188 5-94 (256)
456 3av4_A DNA (cytosine-5)-methyl 79.6 18 0.00063 38.1 12.5 42 108-153 851-894 (1330)
457 3uve_A Carveol dehydrogenase ( 79.6 4.2 0.00014 34.8 6.8 81 108-189 11-113 (286)
458 3pgx_A Carveol dehydrogenase; 79.5 4.2 0.00015 34.6 6.8 82 108-190 15-115 (280)
459 3sx2_A Putative 3-ketoacyl-(ac 79.4 3.4 0.00012 35.1 6.2 84 107-191 12-113 (278)
460 2g5c_A Prephenate dehydrogenas 79.3 5.7 0.00019 33.8 7.6 89 110-217 3-94 (281)
461 2c07_A 3-oxoacyl-(acyl-carrier 79.3 8.1 0.00028 32.9 8.6 82 108-190 44-131 (285)
462 2rhc_B Actinorhodin polyketide 79.3 3.6 0.00012 35.1 6.3 81 108-189 22-108 (277)
463 2ew2_A 2-dehydropantoate 2-red 79.0 8.7 0.0003 33.0 8.8 102 109-218 4-107 (316)
464 3gaz_A Alcohol dehydrogenase s 79.0 0.79 2.7E-05 40.7 2.0 91 106-218 149-245 (343)
465 3tox_A Short chain dehydrogena 78.7 1.9 6.7E-05 36.9 4.4 81 108-189 8-94 (280)
466 4a0s_A Octenoyl-COA reductase/ 78.5 7.5 0.00026 35.7 8.6 99 105-219 218-336 (447)
467 1zem_A Xylitol dehydrogenase; 78.2 4.2 0.00014 34.3 6.3 81 108-189 7-93 (262)
468 4ibo_A Gluconate dehydrogenase 78.0 2.1 7.2E-05 36.5 4.3 82 108-190 26-113 (271)
469 3svt_A Short-chain type dehydr 77.9 4.6 0.00016 34.4 6.5 82 108-190 11-101 (281)
470 1yxm_A Pecra, peroxisomal tran 77.7 4.8 0.00016 34.6 6.7 81 108-189 18-109 (303)
471 3sxp_A ADP-L-glycero-D-mannohe 77.5 0.41 1.4E-05 42.8 -0.4 82 108-190 10-100 (362)
472 2x9g_A PTR1, pteridine reducta 77.5 13 0.00045 31.6 9.4 61 108-169 23-85 (288)
473 3cxt_A Dehydrogenase with diff 77.4 4 0.00014 35.1 6.1 81 108-189 34-120 (291)
474 2f1k_A Prephenate dehydrogenas 77.4 6.8 0.00023 33.2 7.5 87 110-216 2-88 (279)
475 2qq5_A DHRS1, dehydrogenase/re 77.3 2.7 9.3E-05 35.4 4.9 80 108-188 5-91 (260)
476 4dcm_A Ribosomal RNA large sub 77.3 8.1 0.00028 34.7 8.2 96 108-220 39-137 (375)
477 3ioy_A Short-chain dehydrogena 77.1 4.1 0.00014 35.6 6.1 82 108-190 8-97 (319)
478 1geg_A Acetoin reductase; SDR 77.0 4.6 0.00016 33.8 6.2 81 108-189 2-88 (256)
479 2zat_A Dehydrogenase/reductase 76.9 4.5 0.00016 33.9 6.1 81 108-189 14-100 (260)
480 2km1_A Protein DRE2; yeast, an 76.7 0.88 3E-05 34.3 1.3 42 175-217 54-96 (136)
481 1y1p_A ARII, aldehyde reductas 76.5 7.7 0.00026 33.7 7.8 81 108-190 11-93 (342)
482 3r1i_A Short-chain type dehydr 76.4 3.5 0.00012 35.1 5.4 82 108-190 32-119 (276)
483 3r6d_A NAD-dependent epimerase 76.4 2.2 7.5E-05 34.8 3.9 75 110-190 7-83 (221)
484 1eg2_A Modification methylase 76.3 1 3.6E-05 39.6 1.9 56 160-219 39-106 (319)
485 4da9_A Short-chain dehydrogena 76.3 5.7 0.0002 33.9 6.7 82 108-190 29-117 (280)
486 3ce6_A Adenosylhomocysteinase; 76.3 2.5 8.7E-05 39.5 4.6 89 107-219 273-361 (494)
487 2cfc_A 2-(R)-hydroxypropyl-COM 76.2 4.4 0.00015 33.6 5.9 81 108-189 2-89 (250)
488 3gqv_A Enoyl reductase; medium 76.2 2.5 8.6E-05 37.9 4.5 94 106-218 163-262 (371)
489 1xkq_A Short-chain reductase f 75.9 4.1 0.00014 34.7 5.7 81 108-189 6-95 (280)
490 1iy8_A Levodione reductase; ox 75.9 4.3 0.00015 34.3 5.7 81 108-189 13-101 (267)
491 3l77_A Short-chain alcohol deh 75.7 4.7 0.00016 33.2 5.8 82 108-190 2-90 (235)
492 4imr_A 3-oxoacyl-(acyl-carrier 75.6 2.6 8.9E-05 36.0 4.3 81 108-189 33-118 (275)
493 3tsc_A Putative oxidoreductase 75.5 6.2 0.00021 33.5 6.7 82 108-190 11-111 (277)
494 3g79_A NDP-N-acetyl-D-galactos 75.4 6.2 0.00021 36.7 7.0 100 108-218 18-146 (478)
495 3g0o_A 3-hydroxyisobutyrate de 75.0 4.3 0.00015 35.1 5.6 91 108-217 7-100 (303)
496 3tqh_A Quinone oxidoreductase; 74.6 7.4 0.00025 33.9 7.1 92 106-218 151-244 (321)
497 3d1l_A Putative NADP oxidoredu 74.6 7.8 0.00027 32.6 7.1 91 108-218 10-101 (266)
498 1w6u_A 2,4-dienoyl-COA reducta 74.5 4.5 0.00015 34.7 5.6 81 108-189 26-113 (302)
499 1xu9_A Corticosteroid 11-beta- 74.3 3.7 0.00013 35.1 4.9 79 108-187 28-113 (286)
500 3s55_A Putative short-chain de 74.2 6.9 0.00024 33.3 6.7 82 108-190 10-109 (281)
No 1
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.89 E-value=1.1e-22 Score=178.03 Aligned_cols=161 Identities=18% Similarity=0.354 Sum_probs=119.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|..+..+++.+..++++|+|+|+|+.|++.|++++... ..+++++++|+.+ +++ ++||+|
T Consensus 70 ~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~----~~~--~~~d~v 143 (261)
T 4gek_A 70 PGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRD----IAI--ENASMV 143 (261)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTT----CCC--CSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccc----ccc--cccccc
Confidence 38899999999999999999987657889999999999999999987653 3579999999974 443 569999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHh---------hhcCccccCc-eee--cCCCeeeecc
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLR---------FKKGRCLQDN-FYA--RGDGTLVYFF 252 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~---------~~~~~~~~~~-~~~--~~~~~~~~~~ 252 (352)
++.++++|+++++...+|++++++|||||+|++.+.......... +.....+... ... .........+
T Consensus 144 ~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~ 223 (261)
T 4gek_A 144 VLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTD 223 (261)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCB
T ss_pred eeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCC
Confidence 999999999888888999999999999999999876543321110 0000000000 000 0000112347
Q ss_pred CHHHHHHHHHhCCCceEEeee
Q psy11741 253 TREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 253 ~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
+.+++..+|+++||..+++.+
T Consensus 224 s~~~~~~~L~~AGF~~ve~~f 244 (261)
T 4gek_A 224 SVETHKARLHKAGFEHSELWF 244 (261)
T ss_dssp CHHHHHHHHHHHTCSEEEEEE
T ss_pred CHHHHHHHHHHcCCCeEEEEE
Confidence 889999999999999887654
No 2
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.89 E-value=1.8e-22 Score=177.45 Aligned_cols=185 Identities=17% Similarity=0.213 Sum_probs=133.9
Q ss_pred HhhhhHHHHhhhcccccccc--hhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEe
Q psy11741 64 DVAKNWDAFYNVHQNRFFKD--RHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCD 140 (352)
Q Consensus 64 ~~~~yw~~~y~~~~~~f~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD 140 (352)
.+..||+.||..+...+..+ ..|....+..++.. +..++.+|||||||+|.++..++. .+. +|+|+|
T Consensus 16 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~vLDiGCG~G~~~~~~~~----~~~~~v~g~D 85 (263)
T 2a14_A 16 LPRDYLATYYSFDGSPSPEAEMLKFNLECLHKTFGP------GGLQGDTLIDIGSGPTIYQVLAAC----DSFQDITLSD 85 (263)
T ss_dssp CHHHHHHHHCCCCCSCCHHHHHHHHHHHHHHHHHST------TSCCEEEEEESSCTTCCGGGTTGG----GTEEEEEEEE
T ss_pred CHHHHHHHhcCCCcccchhhHHHHHHHHHHHHHhcC------CCCCCceEEEeCCCccHHHHHHHH----hhhcceeecc
Confidence 46789999998776655554 67877777777643 133478999999999988776665 444 799999
Q ss_pred CCHHHHHHHHhccccCC------------------------------CceE-EEEecCCCCCCCCCCCCCcceEEEehhh
Q psy11741 141 FSENAVNILKEHEEYKP------------------------------DRCH-AFVCDVTSEDWNPPFAPESLDIVLLIFV 189 (352)
Q Consensus 141 ~s~~~l~~a~~~~~~~~------------------------------~~v~-~~~~d~~~~~~~~~~~~~~fD~V~~~~~ 189 (352)
+|+.|++.|+++++... .++. ++++|+.+.....+...++||+|+++++
T Consensus 86 ~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~ 165 (263)
T 2a14_A 86 FTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLA 165 (263)
T ss_dssp SCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESC
T ss_pred ccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeehHH
Confidence 99999999988654321 1233 8899998632111123568999999999
Q ss_pred hhcc--ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCe-eeeccCHHHHHHHHHhCCC
Q psy11741 190 LDAI--NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGT-LVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 190 l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~Gf 266 (352)
+||+ +.+++..++++++++|||||.|++...... ..+..+... ....++.+++.++++++||
T Consensus 166 l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~---------------~~~~~g~~~~~~~~~~~~~l~~~l~~aGF 230 (263)
T 2a14_A 166 MECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRL---------------PSYMVGKREFSCVALEKGEVEQAVLDAGF 230 (263)
T ss_dssp HHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSC---------------CEEEETTEEEECCCCCHHHHHHHHHHTTE
T ss_pred HHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecC---------------ccceeCCeEeeccccCHHHHHHHHHHCCC
Confidence 9986 346888999999999999999999864321 111112111 2235799999999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.++....
T Consensus 231 ~i~~~~~ 237 (263)
T 2a14_A 231 DIEQLLH 237 (263)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9988754
No 3
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.87 E-value=1.3e-21 Score=165.03 Aligned_cols=140 Identities=16% Similarity=0.198 Sum_probs=116.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++. .+.+++|+|+|+.|++.|+++. .++.+.++|+.+ +++++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~fD~v~~~ 109 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLAS----LGHQIEGLEPATRLVELARQTH----PSVTFHHGTITD----LSDSPKRWAGLLAW 109 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHH----TTCCEEEECCCHHHHHHHHHHC----TTSEEECCCGGG----GGGSCCCEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHhC----CCCeEEeCcccc----cccCCCCeEEEEeh
Confidence 67999999999999999998 5669999999999999999874 468999999874 45667899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|++.+++..++++++++|+|||.+++.++....... .........+++.+++..+++++||+
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~Gf~ 175 (203)
T 3h2b_A 110 YSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGPSLEP--------------MYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp SSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCSSCEE--------------ECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred hhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCCchhh--------------hhchhhhhccCCHHHHHHHHHHCCCc
Confidence 9999997779999999999999999999998766532110 01112234568999999999999999
Q ss_pred eEEeee
Q psy11741 268 EKQNLI 273 (352)
Q Consensus 268 ~~~~~~ 273 (352)
++....
T Consensus 176 ~~~~~~ 181 (203)
T 3h2b_A 176 VTSSHW 181 (203)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998754
No 4
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.87 E-value=5.5e-22 Score=172.66 Aligned_cols=180 Identities=14% Similarity=0.183 Sum_probs=130.4
Q ss_pred HHHhhHHhhhhHHHHhhhcccccccc--hhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeE
Q psy11741 58 IQTLNEDVAKNWDAFYNVHQNRFFKD--RHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVF 135 (352)
Q Consensus 58 ~~~~~~~~~~yw~~~y~~~~~~f~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~ 135 (352)
...+.....+||++.|......|... ...+...+..+.. ..++.+|||+|||+|..+..|++ .|.+
T Consensus 25 ~~~~~~~~~~~Wd~~y~~~~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~vLD~GCG~G~~~~~La~----~G~~ 92 (252)
T 2gb4_A 25 VQKNQVLTLEDWKEKWVTRHISFHQEQGHQLLKKHLDTFLK--------GQSGLRVFFPLCGKAIEMKWFAD----RGHT 92 (252)
T ss_dssp TTTTCCCCHHHHHHHHHHTCCTTCCTTCCHHHHHHHHHHHT--------TCCSCEEEETTCTTCTHHHHHHH----TTCE
T ss_pred ccccccCCHHHHHHHHhcCCCCcccCCCCHHHHHHHHHhcc--------CCCCCeEEEeCCCCcHHHHHHHH----CCCe
Confidence 45556677889999988765555332 2223333333321 11378999999999999999998 6789
Q ss_pred EEEEeCCHHHHHHHHhcccc------------------CCCceEEEEecCCCCCCCCCCCC-CcceEEEehhhhhccChh
Q psy11741 136 VYGCDFSENAVNILKEHEEY------------------KPDRCHAFVCDVTSEDWNPPFAP-ESLDIVLLIFVLDAINPN 196 (352)
Q Consensus 136 v~gvD~s~~~l~~a~~~~~~------------------~~~~v~~~~~d~~~~~~~~~~~~-~~fD~V~~~~~l~~~~~~ 196 (352)
|+|+|+|+.|++.|+++... ...++.+.++|+.+ ++..+ ++||+|++..++++++++
T Consensus 93 V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~----l~~~~~~~FD~V~~~~~l~~l~~~ 168 (252)
T 2gb4_A 93 VVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD----LPRANIGKFDRIWDRGALVAINPG 168 (252)
T ss_dssp EEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT----GGGGCCCCEEEEEESSSTTTSCGG
T ss_pred EEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc----CCcccCCCEEEEEEhhhhhhCCHH
Confidence 99999999999999776431 23679999999984 44433 799999999999999888
Q ss_pred HHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEee
Q psy11741 197 KMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 197 ~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
+...+++++.++|||||++++.++.... .. ..+ ..+.++.+++..++.. +|+++...
T Consensus 169 ~~~~~l~~~~~~LkpGG~l~l~~~~~~~--------~~---------~~g-~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 169 DHDRYADIILSLLRKEFQYLVAVLSYDP--------TK---------HAG-PPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp GHHHHHHHHHHTEEEEEEEEEEEEECCT--------TS---------CCC-SSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred HHHHHHHHHHHHcCCCeEEEEEEEecCC--------cc---------CCC-CCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 8899999999999999999765432110 00 001 1123789999999987 59887764
No 5
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.87 E-value=5.8e-22 Score=169.37 Aligned_cols=154 Identities=22% Similarity=0.258 Sum_probs=114.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++.. .++.+.++|+.+ ++++ ++||+|++.
T Consensus 46 ~~~vLDiGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~----~~~~-~~fD~v~~~ 113 (220)
T 3hnr_A 46 FGNVLEFGVGTGNLTNKLLL----AGRTVYGIEPSREMRMIAKEKLP---KEFSITEGDFLS----FEVP-TSIDTIVST 113 (220)
T ss_dssp CSEEEEECCTTSHHHHHHHH----TTCEEEEECSCHHHHHHHHHHSC---TTCCEESCCSSS----CCCC-SCCSEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHh----CCCeEEEEeCCHHHHHHHHHhCC---CceEEEeCChhh----cCCC-CCeEEEEEC
Confidence 78999999999999999998 56799999999999999998865 568999999984 4444 899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceee-cCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYA-RGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
.+++|++..+...+++++.++|||||.+++.++...................+.. ........+++.+++..+++++||
T Consensus 114 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf 193 (220)
T 3hnr_A 114 YAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFADQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGF 193 (220)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSSHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTE
T ss_pred cchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCC
Confidence 9999996555556999999999999999998765443222111000000000000 000111235689999999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
+++....
T Consensus 194 ~v~~~~~ 200 (220)
T 3hnr_A 194 HVTFTRL 200 (220)
T ss_dssp EEEEEEC
T ss_pred EEEEeec
Confidence 9887654
No 6
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.87 E-value=2.7e-21 Score=167.02 Aligned_cols=175 Identities=19% Similarity=0.255 Sum_probs=130.7
Q ss_pred HhhhhHHHHhhhcccccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCH
Q psy11741 64 DVAKNWDAFYNVHQNRFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSE 143 (352)
Q Consensus 64 ~~~~yw~~~y~~~~~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~ 143 (352)
....+|+..|......|..... ...+..++... ..++.+|||+|||+|.++..+++ ++.+|+|+|+|+
T Consensus 31 ~~~~~w~~~~~~~~~~~~~~~~--~~~l~~~~~~~------~~~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~ 98 (235)
T 3lcc_A 31 VEEGGWEKCWEEEITPWDQGRA--TPLIVHLVDTS------SLPLGRALVPGCGGGHDVVAMAS----PERFVVGLDISE 98 (235)
T ss_dssp HHHHHHHHHHHTTCCTTCCSSC--CHHHHHHHHTT------CSCCEEEEEETCTTCHHHHHHCB----TTEEEEEECSCH
T ss_pred cCHHHHHHHHhcCCCCcccCCC--CHHHHHHHHhc------CCCCCCEEEeCCCCCHHHHHHHh----CCCeEEEEECCH
Confidence 3457899888765555542211 01112222211 11256999999999999999987 788999999999
Q ss_pred HHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 144 NAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 144 ~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
.+++.|+++.... ..++.+.++|+.+. + ++++||+|++..+++++++++...+++++.++|+|||.+++.++.
T Consensus 99 ~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 173 (235)
T 3lcc_A 99 SALAKANETYGSSPKAEYFSFVKEDVFTW----R-PTELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYP 173 (235)
T ss_dssp HHHHHHHHHHTTSGGGGGEEEECCCTTTC----C-CSSCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHhhccCCCcceEEEECchhcC----C-CCCCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEec
Confidence 9999999987652 35799999999852 2 356999999999999998789999999999999999999998765
Q ss_pred CCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEeeee
Q psy11741 222 RYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQNLID 274 (352)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~~~ 274 (352)
.... .....+.++.+++..+++++||.++.....
T Consensus 174 ~~~~-------------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~ 207 (235)
T 3lcc_A 174 ITDH-------------------VGGPPYKVDVSTFEEVLVPIGFKAVSVEEN 207 (235)
T ss_dssp CSCC-------------------CSCSSCCCCHHHHHHHHGGGTEEEEEEEEC
T ss_pred cccc-------------------CCCCCccCCHHHHHHHHHHcCCeEEEEEec
Confidence 4210 011123478999999999999999887553
No 7
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.87 E-value=3.7e-21 Score=165.87 Aligned_cols=158 Identities=21% Similarity=0.361 Sum_probs=118.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC------ceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD------RCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~------~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++....+. ++.+.++|+. .+++++++|
T Consensus 31 ~~~vLdiG~G~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~ 102 (235)
T 3sm3_A 31 DDEILDIGCGSGKISLELAS----KGYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENAS----SLSFHDSSF 102 (235)
T ss_dssp TCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTT----SCCSCTTCE
T ss_pred CCeEEEECCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEeccc----ccCCCCCce
Confidence 78999999999999999998 567999999999999999998765332 6899999987 445667899
Q ss_pred eEEEehhhhhccC-hhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhh---c---CccccCceeec-----CCCeee
Q psy11741 182 DIVLLIFVLDAIN-PNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFK---K---GRCLQDNFYAR-----GDGTLV 249 (352)
Q Consensus 182 D~V~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~-----~~~~~~ 249 (352)
|+|++..+++|++ +.....+++++.++|+|||.+++.++........... . .......+... ......
T Consensus 103 D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (235)
T 3sm3_A 103 DFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIA 182 (235)
T ss_dssp EEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEE
T ss_pred eEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceee
Confidence 9999999999993 4556699999999999999999988755422111000 0 00000011111 012344
Q ss_pred eccCHHHHHHHHHhCCCceEEeee
Q psy11741 250 YFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 250 ~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
.+++.+++..+++++||+++....
T Consensus 183 ~~~~~~~l~~ll~~aGf~~~~~~~ 206 (235)
T 3sm3_A 183 HHFTEKELVFLLTDCRFEIDYFRV 206 (235)
T ss_dssp ECBCHHHHHHHHHTTTEEEEEEEE
T ss_pred EeCCHHHHHHHHHHcCCEEEEEEe
Confidence 678999999999999999998755
No 8
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.86 E-value=9.5e-21 Score=161.42 Aligned_cols=153 Identities=16% Similarity=0.119 Sum_probs=112.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|++. ...++.+.++|+.+ + +++++||+|++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~~----~~~v~~~D~s~~~~~~a~~~---~~~~~~~~~~d~~~----~-~~~~~~D~v~~~ 114 (218)
T 3ou2_A 47 RGDVLELASGTGYWTRHLSGL----ADRVTALDGSAEMIAEAGRH---GLDNVEFRQQDLFD----W-TPDRQWDAVFFA 114 (218)
T ss_dssp CSEEEEESCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHGGG---CCTTEEEEECCTTS----C-CCSSCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHhc---CCCCeEEEeccccc----C-CCCCceeEEEEe
Confidence 679999999999999999984 56999999999999999882 22679999999974 2 457899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCee----eeccCHHHHHHHHHh
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTL----VYFFTREEVKTMFES 263 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ll~~ 263 (352)
.+++|++.+....++++++++|+|||.+++.+++.+......................+.+ ..+++.+++.+++++
T Consensus 115 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 194 (218)
T 3ou2_A 115 HWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDHERRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTA 194 (218)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCCC------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHH
T ss_pred chhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCCccccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHH
Confidence 9999997666799999999999999999999877643221111100000000001112221 236799999999999
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
+||++....
T Consensus 195 aGf~v~~~~ 203 (218)
T 3ou2_A 195 LGWSCSVDE 203 (218)
T ss_dssp TTEEEEEEE
T ss_pred CCCEEEeee
Confidence 999966543
No 9
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.86 E-value=1.1e-20 Score=162.94 Aligned_cols=159 Identities=17% Similarity=0.215 Sum_probs=120.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|+++....+ ++.+.++|+.+ ++++ ++||+|++
T Consensus 44 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~----~~~~-~~fD~v~~ 115 (234)
T 3dtn_A 44 ENPDILDLGAGTGLLSAFLMEKY--PEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSK----YDFE-EKYDMVVS 115 (234)
T ss_dssp SSCEEEEETCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTT----CCCC-SCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhc----cCCC-CCceEEEE
Confidence 47899999999999999999976 68899999999999999999876554 89999999974 3444 89999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhh---------hcCccccCceee--cCCCeeeeccCHH
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRF---------KKGRCLQDNFYA--RGDGTLVYFFTRE 255 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~ 255 (352)
..+++|++..+...++++++++|||||.+++.+........... .....+...... .........++.+
T Consensus 116 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (234)
T 3dtn_A 116 ALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHGETAFIENLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMN 195 (234)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHH
T ss_pred eCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCChhhhhHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHH
Confidence 99999997666678999999999999999998866543322110 000000000000 0111344568899
Q ss_pred HHHHHHHhCCCceEEeee
Q psy11741 256 EVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 256 ~~~~ll~~~Gf~~~~~~~ 273 (352)
++.++++++||+.++...
T Consensus 196 ~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 196 QQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp HHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHcCCCceeeee
Confidence 999999999999998765
No 10
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.86 E-value=1.1e-20 Score=160.36 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=114.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++. ++.+..+|+.. ++ .+++||+|++.
T Consensus 44 ~~~vLDiGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~----~~-~~~~fD~v~~~ 109 (211)
T 3e23_A 44 GAKILELGCGAGYQAEAMLA----AGFDVDATDGSPELAAEASRRL-----GRPVRTMLFHQ----LD-AIDAYDAVWAH 109 (211)
T ss_dssp TCEEEESSCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHH-----TSCCEECCGGG----CC-CCSCEEEEEEC
T ss_pred CCcEEEECCCCCHHHHHHHH----cCCeEEEECCCHHHHHHHHHhc-----CCceEEeeecc----CC-CCCcEEEEEec
Confidence 77999999999999999998 5679999999999999999886 36788888874 33 57899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC-C
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG-F 266 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G-f 266 (352)
.+++|++.+++..++++++++|||||++++........ .....+....+++.+++..+++++| |
T Consensus 110 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~l~~aG~f 174 (211)
T 3e23_A 110 ACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGEGE---------------GRDKLARYYNYPSEEWLRARYAEAGTW 174 (211)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCSSC---------------EECTTSCEECCCCHHHHHHHHHHHCCC
T ss_pred CchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCCcc---------------cccccchhccCCCHHHHHHHHHhCCCc
Confidence 99999977799999999999999999999976443210 1112233445689999999999999 9
Q ss_pred ceEEeeee
Q psy11741 267 VEKQNLID 274 (352)
Q Consensus 267 ~~~~~~~~ 274 (352)
+++.....
T Consensus 175 ~~~~~~~~ 182 (211)
T 3e23_A 175 ASVAVESS 182 (211)
T ss_dssp SEEEEEEE
T ss_pred EEEEEEec
Confidence 99987653
No 11
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.85 E-value=1.6e-20 Score=158.29 Aligned_cols=163 Identities=17% Similarity=0.177 Sum_probs=124.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+ +|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++....+.++.+.++|+.. +++++++||+|++.
T Consensus 31 ~-~vLdiGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~~~ 101 (202)
T 2kw5_A 31 G-KILCLAEGEGRNACFLAS----LGYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLAD----FDIVADAWEGIVSI 101 (202)
T ss_dssp S-EEEECCCSCTHHHHHHHT----TTCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTT----BSCCTTTCSEEEEE
T ss_pred C-CEEEECCCCCHhHHHHHh----CCCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhh----cCCCcCCccEEEEE
Confidence 5 999999999999999988 56699999999999999999876545579999999874 44567899999985
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
. .|++.++...+++++.++|+|||.+++.++....... ..+ .......+++.+++..+++ ||+
T Consensus 102 ~--~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~---~~~----------~~~~~~~~~~~~~l~~~l~--Gf~ 164 (202)
T 2kw5_A 102 F--CHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQY---NTG----------GPKDLDLLPKLETLQSELP--SLN 164 (202)
T ss_dssp C--CCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTTGGG---TSC----------CSSSGGGCCCHHHHHHHCS--SSC
T ss_pred h--hcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccccccC---CCC----------CCCcceeecCHHHHHHHhc--Cce
Confidence 3 4556688999999999999999999998876543211 000 1122345789999999999 999
Q ss_pred eEEeeeeeeeeeecCCccceeeeeEeeEEe
Q psy11741 268 EKQNLIDRRLQVNRGKQIKMYRVWIQAKSY 297 (352)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
++....... ....+.....+..|++...+
T Consensus 165 v~~~~~~~~-~~~~g~~~~~~~~~i~~~~~ 193 (202)
T 2kw5_A 165 WLIANNLER-NLDEGAYHQGKAALIQLLGQ 193 (202)
T ss_dssp EEEEEEEEE-ECSCSSSSCCEEEEEEEEEC
T ss_pred EEEEEEEEe-ecCCCCCcccHHHHHHHHHH
Confidence 998754332 23344555567788876543
No 12
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.85 E-value=3.6e-21 Score=163.98 Aligned_cols=155 Identities=14% Similarity=0.180 Sum_probs=116.0
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
.+|||+|||+|.++..+++. ++.+++|+|+|+.+++.|+++....+ .++.+.++|+. .+++++++||+|++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~---~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~~D~v~~ 117 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ---SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVH----NIPIEDNYADLIVS 117 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH---SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTT----BCSSCTTCEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHc---CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHH----HCCCCcccccEEEE
Confidence 39999999999999999986 57899999999999999999876543 47999999997 45566889999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcC-ccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKG-RCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
..+++|+ .++..++++++++|+|||.+++.+.............. ......+. .........++.+++..+++++|
T Consensus 118 ~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~aG 194 (219)
T 3dlc_A 118 RGSVFFW--EDVATAFREIYRILKSGGKTYIGGGFGNKELRDSISAEMIRKNPDWK-EFNRKNISQENVERFQNVLDEIG 194 (219)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEECCSSHHHHHHHHHHHHHHCTTHH-HHHHHHSSHHHHHHHHHHHHHHT
T ss_pred CchHhhc--cCHHHHHHHHHHhCCCCCEEEEEeccCcHHHHHHHHHHHHHhHHHHH-hhhhhccccCCHHHHHHHHHHcC
Confidence 9999999 78899999999999999999998755433111100000 00000000 00001223467899999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|+++....
T Consensus 195 f~~v~~~~ 202 (219)
T 3dlc_A 195 ISSYEIIL 202 (219)
T ss_dssp CSSEEEEE
T ss_pred CCeEEEEe
Confidence 99987753
No 13
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.85 E-value=3.4e-20 Score=160.71 Aligned_cols=145 Identities=17% Similarity=0.220 Sum_probs=114.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-CCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-PDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... ..++.+..+|+.. +++++++||+|+
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~ 151 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL---FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQD----FTPEPDSYDVIW 151 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT---CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGG----CCCCSSCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhh----cCCCCCCEEEEE
Confidence 47899999999999999988852 458999999999999999987654 3568899999874 445567899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|++.+....+++++.++|+|||++++.+..... ...+..... ....+.+++..+++++|
T Consensus 152 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~-------------~~~~~~~~~--~~~~~~~~~~~~l~~aG 216 (241)
T 2ex4_A 152 IQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMAQE-------------GVILDDVDS--SVCRDLDVVRRIICSAG 216 (241)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEBSS-------------SEEEETTTT--EEEEBHHHHHHHHHHTT
T ss_pred EcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccCCC-------------cceecccCC--cccCCHHHHHHHHHHcC
Confidence 999999997666789999999999999999997754332 011111111 22358999999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|.++....
T Consensus 217 f~~~~~~~ 224 (241)
T 2ex4_A 217 LSLLAEER 224 (241)
T ss_dssp CCEEEEEE
T ss_pred CeEEEeee
Confidence 99988754
No 14
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.85 E-value=7.8e-21 Score=166.96 Aligned_cols=151 Identities=15% Similarity=0.296 Sum_probs=111.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++.. ++.++++|+.+ +++ +++||+|++.
T Consensus 51 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~----~~~-~~~fD~v~~~ 117 (263)
T 3pfg_A 51 AASLLDVACGTGMHLRHLAD----SFGTVEGLELSADMLAIARRRNP----DAVLHHGDMRD----FSL-GRRFSAVTCM 117 (263)
T ss_dssp CCEEEEETCTTSHHHHHHTT----TSSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTT----CCC-SCCEEEEEEC
T ss_pred CCcEEEeCCcCCHHHHHHHH----cCCeEEEEECCHHHHHHHHhhCC----CCEEEECChHH----CCc-cCCcCEEEEc
Confidence 68999999999999999988 55689999999999999998753 68999999984 333 6899999999
Q ss_pred h-hhhccC-hhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhh-------hcCcc---------------ccCceeec
Q psy11741 188 F-VLDAIN-PNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRF-------KKGRC---------------LQDNFYAR 243 (352)
Q Consensus 188 ~-~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-------~~~~~---------------~~~~~~~~ 243 (352)
. +++|+. +++...++++++++|+|||.+++..+..+....... ..+.. ....+...
T Consensus 118 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (263)
T 3pfg_A 118 FSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWFPENFTPGYVAAGTVEAGGTTVTRVSHSSREGEATRIEVHYLVA 197 (263)
T ss_dssp TTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCCTTTCCTTEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccChhhccccccccceeccCCceeEEEEEEEecCcEEEEEEEEEEe
Confidence 8 999994 468889999999999999999997543322110000 00000 00000000
Q ss_pred -CC--------CeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 244 -GD--------GTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 244 -~~--------~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
.. .....+++.+++..+|+++||+++.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~ 234 (263)
T 3pfg_A 198 GPDRGITHHEESHRITLFTREQYERAFTAAGLSVEFM 234 (263)
T ss_dssp ETTTEEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEE
T ss_pred cCCCcEEEEEEEEEEEeecHHHHHHHHHHCCCEEEEe
Confidence 11 11245789999999999999998876
No 15
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.84 E-value=7.1e-21 Score=169.25 Aligned_cols=156 Identities=21% Similarity=0.317 Sum_probs=117.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|.++..+++ .+.+|+|+|+|+.|++.|+++....+ .++.++++|+.+. .++.+++||+|+
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~v~ 141 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAE----RGHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDV---ASHLETPVDLIL 141 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGT---GGGCSSCEEEEE
T ss_pred CCEEEEeCCcchHHHHHHHH----CCCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHh---hhhcCCCceEEE
Confidence 67999999999999999998 56799999999999999999876543 5799999999842 125578999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCc--cccCceee--cCCCeeeeccCHHHHHHHH
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGR--CLQDNFYA--RGDGTLVYFFTREEVKTMF 261 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~ll 261 (352)
+..+++|+ .++..+++++.++|||||++++.+++...........+. .+...... ........+++.+++..++
T Consensus 142 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 219 (285)
T 4htf_A 142 FHAVLEWV--ADPRSVLQTLWSVLRPGGVLSLMFYNAHGLLMHNMVAGNFDYVQAGMPKKKKRTLSPDYPRDPTQVYLWL 219 (285)
T ss_dssp EESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHTTCCCC----CCCSCCBCHHHHHHHH
T ss_pred ECchhhcc--cCHHHHHHHHHHHcCCCeEEEEEEeCCchHHHHHHHhcCHHHHhhhccccccccCCCCCCCCHHHHHHHH
Confidence 99999999 677899999999999999999988765432211111110 00000000 1112233568999999999
Q ss_pred HhCCCceEEee
Q psy11741 262 ESAGFVEKQNL 272 (352)
Q Consensus 262 ~~~Gf~~~~~~ 272 (352)
+++||+++...
T Consensus 220 ~~aGf~v~~~~ 230 (285)
T 4htf_A 220 EEAGWQIMGKT 230 (285)
T ss_dssp HHTTCEEEEEE
T ss_pred HHCCCceeeee
Confidence 99999998764
No 16
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.84 E-value=3e-20 Score=161.03 Aligned_cols=145 Identities=19% Similarity=0.287 Sum_probs=116.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|+++.. ..++.++++|+.+ +++++++||+|++.
T Consensus 54 ~~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~----~~~~~~~fD~v~~~ 123 (242)
T 3l8d_A 54 EAEVLDVGCGDGYGTYKLSR----TGYKAVGVDISEVMIQKGKERGE--GPDLSFIKGDLSS----LPFENEQFEAIMAI 123 (242)
T ss_dssp TCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHTTTC--BTTEEEEECBTTB----CSSCTTCEEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHH----cCCeEEEEECCHHHHHHHHhhcc--cCCceEEEcchhc----CCCCCCCccEEEEc
Confidence 78999999999999999998 56799999999999999998853 3679999999984 45668899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|+ .+...++++++++|+|||++++.+++.......... .. ......+...++.+++..+++++||+
T Consensus 124 ~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~l~~~Gf~ 193 (242)
T 3l8d_A 124 NSLEWT--EEPLRALNEIKRVLKSDGYACIAILGPTAKPRENSY------PR--LYGKDVVCNTMMPWEFEQLVKEQGFK 193 (242)
T ss_dssp SCTTSS--SCHHHHHHHHHHHEEEEEEEEEEEECTTCGGGGGGG------GG--GGTCCCSSCCCCHHHHHHHHHHTTEE
T ss_pred ChHhhc--cCHHHHHHHHHHHhCCCeEEEEEEcCCcchhhhhhh------hh--hccccccccCCCHHHHHHHHHHcCCE
Confidence 999999 788899999999999999999988665432211000 00 01122234568999999999999999
Q ss_pred eEEee
Q psy11741 268 EKQNL 272 (352)
Q Consensus 268 ~~~~~ 272 (352)
++...
T Consensus 194 ~~~~~ 198 (242)
T 3l8d_A 194 VVDGI 198 (242)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 98764
No 17
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.84 E-value=2.1e-20 Score=163.14 Aligned_cols=145 Identities=11% Similarity=0.184 Sum_probs=115.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++.. ..+|+|+|+|+.|++.|+++.... .++.+.++|+.. +++++++||+|++
T Consensus 93 ~~~~vLDiG~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~----~~~~~~~fD~v~~ 164 (254)
T 1xtp_A 93 GTSRALDCGAGIGRITKNLLTKL---YATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMET----ATLPPNTYDLIVI 164 (254)
T ss_dssp CCSEEEEETCTTTHHHHHTHHHH---CSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGG----CCCCSSCEEEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHhh---cCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHH----CCCCCCCeEEEEE
Confidence 47899999999999999998853 347999999999999999987644 678999999874 4456789999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..+++|++.+++..++++++++|||||++++.+...... ..... .......++.+++..+++++||
T Consensus 165 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-------------~~~~~-~~~~~~~~~~~~~~~~l~~aGf 230 (254)
T 1xtp_A 165 QWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCSTGD-------------RFLVD-KEDSSLTRSDIHYKRLFNESGV 230 (254)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC--C-------------CEEEE-TTTTEEEBCHHHHHHHHHHHTC
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCcc-------------cceec-ccCCcccCCHHHHHHHHHHCCC
Confidence 999999987789999999999999999999987432110 00111 1122345789999999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.++....
T Consensus 231 ~~~~~~~ 237 (254)
T 1xtp_A 231 RVVKEAF 237 (254)
T ss_dssp CEEEEEE
T ss_pred EEEEeee
Confidence 9988754
No 18
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.84 E-value=1.5e-20 Score=163.36 Aligned_cols=151 Identities=15% Similarity=0.120 Sum_probs=115.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||||||+|.++..+++ .+.+|+|+|+|+.|++.|+++... ++.+.++|+.+. .++++||+|++.
T Consensus 43 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~-----~~~~~fD~v~~~ 110 (250)
T 2p7i_A 43 PGNLLELGSFKGDFTSRLQE----HFNDITCVEASEEAISHAQGRLKD---GITYIHSRFEDA-----QLPRRYDNIVLT 110 (250)
T ss_dssp SSCEEEESCTTSHHHHHHTT----TCSCEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGC-----CCSSCEEEEEEE
T ss_pred CCcEEEECCCCCHHHHHHHH----hCCcEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHc-----CcCCcccEEEEh
Confidence 67899999999999999988 445899999999999999988653 799999998752 247899999999
Q ss_pred hhhhccChhHHHHHHHHHH-HhcCCCEEEEEEeCCCCchhhHhhhcCccccCc-eee--cCCCeeeeccCHHHHHHHHHh
Q psy11741 188 FVLDAINPNKMQHVINQVY-KYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDN-FYA--RGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~-~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~ll~~ 263 (352)
.+++|+ .++..++++++ ++|||||++++.+++.................. .+. .....+..+++.+++.+++++
T Consensus 111 ~~l~~~--~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 188 (250)
T 2p7i_A 111 HVLEHI--DDPVALLKRINDDWLAEGGRLFLVCPNANAVSRQIAVKMGIISHNSAVTEAEFAHGHRCTYALDTLERDASR 188 (250)
T ss_dssp SCGGGC--SSHHHHHHHHHHTTEEEEEEEEEEEECTTCHHHHHHHHTTSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHH
T ss_pred hHHHhh--cCHHHHHHHHHHHhcCCCCEEEEEcCChHHHHHHHHHHcCccccchhcccccccccccccCCHHHHHHHHHH
Confidence 999999 67789999999 999999999999877654322211100111000 000 001223356899999999999
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
+||+++...
T Consensus 189 ~Gf~~~~~~ 197 (250)
T 2p7i_A 189 AGLQVTYRS 197 (250)
T ss_dssp TTCEEEEEE
T ss_pred CCCeEEEEe
Confidence 999998774
No 19
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.84 E-value=4e-21 Score=162.14 Aligned_cols=138 Identities=9% Similarity=0.037 Sum_probs=107.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-------------CCCceEEEEecCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-------------KPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-------------~~~~v~~~~~d~~~~~~~~ 174 (352)
+.+|||+|||+|..+..|++ .+.+|+|+|+|+.|++.|+++... ...+++++++|+.+ +
T Consensus 23 ~~~vLD~GCG~G~~~~~la~----~g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~----l 94 (203)
T 1pjz_A 23 GARVLVPLCGKSQDMSWLSG----QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFA----L 94 (203)
T ss_dssp TCEEEETTTCCSHHHHHHHH----HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSS----S
T ss_pred CCEEEEeCCCCcHhHHHHHH----CCCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECcccc----C
Confidence 78999999999999999998 567999999999999999987542 13579999999984 4
Q ss_pred CCCC-CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccC
Q psy11741 175 PFAP-ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFT 253 (352)
Q Consensus 175 ~~~~-~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (352)
++.+ ++||+|++..+++|+++++...++++++++|||||++++....... . ...+ ..+.++
T Consensus 95 ~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~~~~~~~--------~---------~~~~-~~~~~~ 156 (203)
T 1pjz_A 95 TARDIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLEYDQ--------A---------LLEG-PPFSVP 156 (203)
T ss_dssp THHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEESSCS--------S---------SSSS-CCCCCC
T ss_pred CcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEEecCc--------c---------ccCC-CCCCCC
Confidence 4443 7899999999999998778889999999999999985544332110 0 0001 112368
Q ss_pred HHHHHHHHHhCCCceEEee
Q psy11741 254 REEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 254 ~~~~~~ll~~~Gf~~~~~~ 272 (352)
.+++..+++. ||+++...
T Consensus 157 ~~el~~~~~~-gf~i~~~~ 174 (203)
T 1pjz_A 157 QTWLHRVMSG-NWEVTKVG 174 (203)
T ss_dssp HHHHHHTSCS-SEEEEEEE
T ss_pred HHHHHHHhcC-CcEEEEec
Confidence 9999999998 99877654
No 20
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.84 E-value=1.2e-20 Score=163.40 Aligned_cols=144 Identities=19% Similarity=0.284 Sum_probs=115.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||||||+|.++..+++ .+.+|+|+|+|+.+++.|+++ +.+..+|+.+. ..++++++||+|++.
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~--~~~~~~~~fD~i~~~ 108 (240)
T 3dli_A 42 CRRVLDIGCGRGEFLELCKE----EGIESIGVDINEDMIKFCEGK-------FNVVKSDAIEY--LKSLPDKYLDGVMIS 108 (240)
T ss_dssp CSCEEEETCTTTHHHHHHHH----HTCCEEEECSCHHHHHHHHTT-------SEEECSCHHHH--HHTSCTTCBSEEEEE
T ss_pred CCeEEEEeCCCCHHHHHHHh----CCCcEEEEECCHHHHHHHHhh-------cceeeccHHHH--hhhcCCCCeeEEEEC
Confidence 68999999999999999988 456899999999999999876 67888887642 014567899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|++.++...+++++.++|||||++++.+++.......... + ....+..+++.+++..+++++||+
T Consensus 109 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~~~~l~~~l~~aGf~ 177 (240)
T 3dli_A 109 HFVEHLDPERLFELLSLCYSKMKYSSYIVIESPNPTSLYSLINF---------Y--IDPTHKKPVHPETLKFILEYLGFR 177 (240)
T ss_dssp SCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEECTTSHHHHHHH---------T--TSTTCCSCCCHHHHHHHHHHHTCE
T ss_pred CchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCCcchhHHHHHH---------h--cCccccccCCHHHHHHHHHHCCCe
Confidence 99999977788999999999999999999988775543222110 0 112344568899999999999999
Q ss_pred eEEeeeee
Q psy11741 268 EKQNLIDR 275 (352)
Q Consensus 268 ~~~~~~~~ 275 (352)
++......
T Consensus 178 ~~~~~~~~ 185 (240)
T 3dli_A 178 DVKIEFFE 185 (240)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEec
Confidence 98876543
No 21
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.84 E-value=1.7e-20 Score=167.63 Aligned_cols=157 Identities=15% Similarity=0.254 Sum_probs=116.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCC-CCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPF-APESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~-~~~~fD~V 184 (352)
+.+|||+|||+|.++..+++. +..+++|+|+|+.|++.|+++....+ .++.+.++|+.+ .++ ++++||+|
T Consensus 65 ~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~~fD~v 137 (298)
T 1ri5_A 65 GDSVLDLGCGKGGDLLKYERA---GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYG----RHMDLGKEFDVI 137 (298)
T ss_dssp TCEEEEETCTTTTTHHHHHHH---TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTT----SCCCCSSCEEEE
T ss_pred CCeEEEECCCCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccc----cccCCCCCcCEE
Confidence 789999999999999998874 34489999999999999999876543 468999999974 334 46899999
Q ss_pred Eehhhhhc--cChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhc---Cc-----------ccc---Cceee---
Q psy11741 185 LLIFVLDA--INPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKK---GR-----------CLQ---DNFYA--- 242 (352)
Q Consensus 185 ~~~~~l~~--~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---~~-----------~~~---~~~~~--- 242 (352)
++..+++| .+.++...+++++.++|+|||.+++..++....... +.. +. .+. ...+.
T Consensus 138 ~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l 216 (298)
T 1ri5_A 138 SSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVPSRDVILER-YKQGRMSNDFYKIELEKMEDVPMESVREYRFTL 216 (298)
T ss_dssp EEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHHH-HHHTCCBCSSEEEECCCCSSCCTTTCCEEEEEE
T ss_pred EECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH-HccCccCCeeEEEEeCccccccccccceEEEEE
Confidence 99999988 456889999999999999999999988664322110 000 00 000 00010
Q ss_pred --cCCCeeeeccCHHHHHHHHHhCCCceEEee
Q psy11741 243 --RGDGTLVYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 243 --~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
.......++++.+++..+++++||+++...
T Consensus 217 ~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~~~ 248 (298)
T 1ri5_A 217 LDSVNNCIEYFVDFTRMVDGFKRLGLSLVERK 248 (298)
T ss_dssp TTSCSSEEEECCCHHHHHHHHHTTTEEEEEEE
T ss_pred chhhcCCcccccCHHHHHHHHHHcCCEEEEec
Confidence 111234567899999999999999988763
No 22
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.84 E-value=7.2e-20 Score=154.98 Aligned_cols=156 Identities=20% Similarity=0.314 Sum_probs=119.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|..+..++.. ++.+++|+|+|+.|++.|+++....+.++.+.++|+.+ +++++++||+|++.
T Consensus 24 ~~~vLDiGcG~G~~~~~~~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~~~ 96 (209)
T 2p8j_A 24 DKTVLDCGAGGDLPPLSIFVE---DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRK----LPFKDESMSFVYSY 96 (209)
T ss_dssp CSEEEEESCCSSSCTHHHHHH---TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTS----CCSCTTCEEEEEEC
T ss_pred CCEEEEECCCCCHHHHHHHHh---CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhh----CCCCCCceeEEEEc
Confidence 689999999999985544443 67799999999999999999876555678999999974 45667899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceee---cCCCeeeeccCHHHHHHHHHhC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYA---RGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
.+++|++.++...++++++++|+|||.+++.+++..+... ..+..+....+. ........+++.+++..+++.+
T Consensus 97 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ 173 (209)
T 2p8j_A 97 GTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTTKDERY---NKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDM 173 (209)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTT---TCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTS
T ss_pred ChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecccchhc---cchhhhccccceeccCCCceeEEecCHHHHHHHHhhc
Confidence 9999998789999999999999999999998876543211 111112222221 1223334678999999999999
Q ss_pred CCceEEeee
Q psy11741 265 GFVEKQNLI 273 (352)
Q Consensus 265 Gf~~~~~~~ 273 (352)
||...+...
T Consensus 174 g~~~~~~~~ 182 (209)
T 2p8j_A 174 KVLFKEDRV 182 (209)
T ss_dssp EEEEEEEEE
T ss_pred Cceeeeeee
Confidence 998876543
No 23
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.84 E-value=3.8e-20 Score=161.60 Aligned_cols=155 Identities=21% Similarity=0.300 Sum_probs=114.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++. +. +|+|+|+|+.+++.|+++.. ..++.+.++|+. .+++++++||+|+
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~----~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~----~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEH----GAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIE----DIAIEPDAYNVVL 113 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT----TCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGG----GCCCCTTCEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHc----CCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchh----hCCCCCCCeEEEE
Confidence 4789999999999999999984 33 89999999999999999876 467999999997 4456678999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHh-----hhcCcc---ccCceee--------cCCCeee
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLR-----FKKGRC---LQDNFYA--------RGDGTLV 249 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~-----~~~~~~---~~~~~~~--------~~~~~~~ 249 (352)
+..+++|+ +++..++++++++|||||.+++...++....... ...+.. ....++. .......
T Consensus 114 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (253)
T 3g5l_A 114 SSLALHYI--ASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDETGNKLHWPVDRYFNESMRTSHFLGEDVQK 191 (253)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHSSSSCSCEECSSCCEEEEEECCTTCCCEEEEEETTEEEEE
T ss_pred Echhhhhh--hhHHHHHHHHHHHcCCCcEEEEEeCCCccccCccccceeccCCceEEEEeccccccceEEEeeccccCcc
Confidence 99999999 7889999999999999999999765432110000 000000 0000000 0011122
Q ss_pred eccCHHHHHHHHHhCCCceEEeee
Q psy11741 250 YFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 250 ~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
+..+.+++.++++++||+++.+..
T Consensus 192 ~~~t~~~~~~~l~~aGF~~~~~~e 215 (253)
T 3g5l_A 192 YHRTVTTYIQTLLKNGFQINSVIE 215 (253)
T ss_dssp ECCCHHHHHHHHHHTTEEEEEEEC
T ss_pred EecCHHHHHHHHHHcCCeeeeeec
Confidence 334999999999999999988753
No 24
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.84 E-value=1.6e-20 Score=164.66 Aligned_cols=152 Identities=17% Similarity=0.226 Sum_probs=115.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++....+ .++.+.++|+. .+++++++||+|+
T Consensus 37 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~----~l~~~~~~fD~V~ 108 (260)
T 1vl5_A 37 GNEEVLDVATGGGHVANAFAPF----VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE----QMPFTDERFHIVT 108 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-----CCCSCTTCEEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHh----CCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHH----hCCCCCCCEEEEE
Confidence 3789999999999999999885 3499999999999999998876543 57999999987 4567788999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|+ .++..++++++++|||||++++.+...+........... . .......+...++.+++.++++++|
T Consensus 109 ~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~~~~~~~~l~~aG 181 (260)
T 1vl5_A 109 CRIAAHHF--PNPASFVSEAYRVLKKGGQLLLVDNSAPENDAFDVFYNY-V----EKERDYSHHRAWKKSDWLKMLEEAG 181 (260)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEBCSSHHHHHHHHH-H----HHHHCTTCCCCCBHHHHHHHHHHHT
T ss_pred EhhhhHhc--CCHHHHHHHHHHHcCCCCEEEEEEcCCCCCHHHHHHHHH-H----HHhcCccccCCCCHHHHHHHHHHCC
Confidence 99999999 678899999999999999999976543322111100000 0 0001122334578999999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|.++....
T Consensus 182 f~~~~~~~ 189 (260)
T 1vl5_A 182 FELEELHC 189 (260)
T ss_dssp CEEEEEEE
T ss_pred CeEEEEEE
Confidence 99887654
No 25
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.83 E-value=2.3e-20 Score=162.84 Aligned_cols=105 Identities=20% Similarity=0.397 Sum_probs=89.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++....+.++.+.++|+.+ ++. +++||+|++.
T Consensus 42 ~~~vLDlGcG~G~~~~~l~~----~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~v~~~ 112 (252)
T 1wzn_A 42 VRRVLDLACGTGIPTLELAE----RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLE----IAF-KNEFDAVTMF 112 (252)
T ss_dssp CCEEEEETCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGG----CCC-CSCEEEEEEC
T ss_pred CCEEEEeCCCCCHHHHHHHH----CCCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhh----ccc-CCCccEEEEc
Confidence 67999999999999999998 56799999999999999999877656679999999985 333 3689999986
Q ss_pred h-hhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 188 F-VLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 188 ~-~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
. ++++++.++...++++++++|+|||.+++...+
T Consensus 113 ~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 113 FSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp SSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCchhcCCHHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 4 566667778999999999999999999986543
No 26
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.83 E-value=3.7e-20 Score=165.74 Aligned_cols=157 Identities=17% Similarity=0.249 Sum_probs=117.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC----CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP----DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
+.+|||||||+|.++..+++ .+.+|+|+|+|+.|++.|+++....+ .++.++++|+.+ +++ +++||+
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~ 153 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLD----LGWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSA----FAL-DKRFGT 153 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHT----TTCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTB----CCC-SCCEEE
T ss_pred CCcEEEEeccCCHHHHHHHH----cCCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhc----CCc-CCCcCE
Confidence 45999999999999999998 56789999999999999999887654 679999999985 344 689998
Q ss_pred EEeh-hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhh--------hcCcc--ccCc-----------ee
Q psy11741 184 VLLI-FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRF--------KKGRC--LQDN-----------FY 241 (352)
Q Consensus 184 V~~~-~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~--------~~~~~--~~~~-----------~~ 241 (352)
|++. .+++++++++...++++++++|+|||.|++..++......... ..+.. +... +.
T Consensus 154 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 233 (299)
T 3g2m_A 154 VVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERKQELPGRSGRRYVLHVRHLPAEEIQEITIH 233 (299)
T ss_dssp EEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC-------------CCEEEEEEEEEEEEEEE
T ss_pred EEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhccceeecCCCcEEEEEEEEeccccEEEEEEE
Confidence 8864 6788887778999999999999999999998877643211000 00000 0000 00
Q ss_pred ecC--------CCeeeeccCHHHHHHHHHhCCCceEEeee
Q psy11741 242 ARG--------DGTLVYFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 242 ~~~--------~~~~~~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
... .....++++.+++..+++++||+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~~t~~el~~ll~~aGF~v~~~~~ 273 (299)
T 3g2m_A 234 PADETTDPFVVCTHRRRLLAPDQVVRELVRSGFDVIAQTP 273 (299)
T ss_dssp ESCC--CCCCEEEEEEEEECHHHHHHHHHHTTCEEEEEEE
T ss_pred eccCCCCcEEEEEEEEEEeCHHHHHHHHHHCCCEEEEEEe
Confidence 000 11234578999999999999999998753
No 27
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.83 E-value=2e-20 Score=164.40 Aligned_cols=151 Identities=20% Similarity=0.298 Sum_probs=119.1
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+|||+|.++..+++.+ +.+|+|+|+|+.+++.|+++.... .++.+.++|+.+ +++++++||+|+
T Consensus 54 ~~~~~vLdiG~G~G~~~~~l~~~~---~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~----~~~~~~~fD~v~ 125 (266)
T 3ujc_A 54 NENSKVLDIGSGLGGGCMYINEKY---GAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILT----KEFPENNFDLIY 125 (266)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTT----CCCCTTCEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECcccc----CCCCCCcEEEEe
Confidence 347899999999999999999963 569999999999999999987654 789999999984 456688999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|+++.++..+++++.++|||||.+++.++......... ..+ ..........+++.+++..+++++|
T Consensus 126 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~l~~~G 197 (266)
T 3ujc_A 126 SRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATEKENWD----DEF----KEYVKQRKYTLITVEEYADILTACN 197 (266)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESCGGGCC----HHH----HHHHHHHTCCCCCHHHHHHHHHHTT
T ss_pred HHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCCcccch----HHH----HHHHhcCCCCCCCHHHHHHHHHHcC
Confidence 99999999888999999999999999999999876443211000 000 0000001123578999999999999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|.++...
T Consensus 198 f~~~~~~ 204 (266)
T 3ujc_A 198 FKNVVSK 204 (266)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 9998764
No 28
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.83 E-value=8e-20 Score=160.46 Aligned_cols=184 Identities=18% Similarity=0.276 Sum_probs=127.7
Q ss_pred hhhhHHHHhhhcccccccc--hhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeC
Q psy11741 65 VAKNWDAFYNVHQNRFFKD--RHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDF 141 (352)
Q Consensus 65 ~~~yw~~~y~~~~~~f~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~ 141 (352)
...||+.+|......+... ..+....+..++.. +..++.+|||+|||+|.++..++. .+. +|+|+|+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~vLDlGcG~G~~~~~l~~----~~~~~v~gvD~ 87 (265)
T 2i62_A 18 PRDYLEKYYSFGSRHCAENEILRHLLKNLFKIFCL------GAVKGELLIDIGSGPTIYQLLSAC----ESFTEIIVSDY 87 (265)
T ss_dssp HHHHHHHHHCCCSSCHHHHHHHHHHHHHHHHHHHS------SSCCEEEEEEESCTTCCGGGTTGG----GTEEEEEEEES
T ss_pred HHHHHHHHhCcCCcchhHHHHHHhhHHHHHHHhcc------cccCCCEEEEECCCccHHHHHHhh----cccCeEEEecC
Confidence 4679999997655433221 11211222233322 123478999999999999998887 444 8999999
Q ss_pred CHHHHHHHHhccccCCC------------------------------ce-EEEEecCCCCCCCCCCCCCcceEEEehhhh
Q psy11741 142 SENAVNILKEHEEYKPD------------------------------RC-HAFVCDVTSEDWNPPFAPESLDIVLLIFVL 190 (352)
Q Consensus 142 s~~~l~~a~~~~~~~~~------------------------------~v-~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l 190 (352)
|+.|++.|+++....+. ++ .+.++|+.+.....+...++||+|++..++
T Consensus 88 s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l 167 (265)
T 2i62_A 88 TDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCL 167 (265)
T ss_dssp CHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCH
T ss_pred CHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEhhhh
Confidence 99999999888654321 27 899999986321111223799999999999
Q ss_pred hccCh--hHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCe-eeeccCHHHHHHHHHhCCCc
Q psy11741 191 DAINP--NKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGT-LVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 191 ~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~Gf~ 267 (352)
+++.+ .++..+++++.++|||||+|++.+.... .++..+... ....++.+++..+++++||.
T Consensus 168 ~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~ 232 (265)
T 2i62_A 168 DAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKS---------------SYYMIGEQKFSSLPLGWETVRDAVEEAGYT 232 (265)
T ss_dssp HHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSC---------------CEEEETTEEEECCCCCHHHHHHHHHHTTCE
T ss_pred hhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCC---------------ceEEcCCccccccccCHHHHHHHHHHCCCE
Confidence 95532 5889999999999999999999864321 122222222 23457899999999999999
Q ss_pred eEEeee
Q psy11741 268 EKQNLI 273 (352)
Q Consensus 268 ~~~~~~ 273 (352)
++....
T Consensus 233 ~~~~~~ 238 (265)
T 2i62_A 233 IEQFEV 238 (265)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 988754
No 29
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.83 E-value=1.2e-19 Score=154.77 Aligned_cols=143 Identities=15% Similarity=0.243 Sum_probs=117.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++... +..+++|+|+|+.+++.|+++....+ .++.+..+|+. .+++++++||+|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~----~~~~~~~~fD~v~ 111 (219)
T 3dh0_A 37 EGMTVLDVGTGAGFYLPYLSKMVG-EKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEEN----KIPLPDNTVDFIF 111 (219)
T ss_dssp TTCEEEESSCTTCTTHHHHHHHHT-TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTT----BCSSCSSCEEEEE
T ss_pred CCCEEEEEecCCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccc----cCCCCCCCeeEEE
Confidence 378999999999999999998753 55799999999999999999876533 47999999987 3456678999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|+ .+...+++++.++|+|||.+++.++..... .........++.+++..+++++|
T Consensus 112 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~G 172 (219)
T 3dh0_A 112 MAFTFHEL--SEPLKFLEELKRVAKPFAYLAIIDWKKEER-----------------DKGPPPEEVYSEWEVGLILEDAG 172 (219)
T ss_dssp EESCGGGC--SSHHHHHHHHHHHEEEEEEEEEEEECSSCC-----------------SSSCCGGGSCCHHHHHHHHHHTT
T ss_pred eehhhhhc--CCHHHHHHHHHHHhCCCeEEEEEEeccccc-----------------ccCCchhcccCHHHHHHHHHHCC
Confidence 99999999 678999999999999999999987654321 01112234578999999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|+++....
T Consensus 173 f~~~~~~~ 180 (219)
T 3dh0_A 173 IRVGRVVE 180 (219)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEe
Confidence 99887643
No 30
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.83 E-value=3.4e-20 Score=160.53 Aligned_cols=152 Identities=17% Similarity=0.209 Sum_probs=116.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++. +.+++|+|+|+.|++.|+++....+ .++.+.++|+. .+++++++||+|+
T Consensus 21 ~~~~vLDiGcG~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~----~~~~~~~~fD~v~ 92 (239)
T 1xxl_A 21 AEHRVLDIGAGAGHTALAFSPY----VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAE----SLPFPDDSFDIIT 92 (239)
T ss_dssp TTCEEEEESCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTT----BCCSCTTCEEEEE
T ss_pred CCCEEEEEccCcCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccc----cCCCCCCcEEEEE
Confidence 4789999999999999999884 4489999999999999998875433 57999999987 4556678999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|+ .++..++++++++|||||++++.+...+.......... .......+.+...++.+++..+++++|
T Consensus 93 ~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ll~~aG 165 (239)
T 1xxl_A 93 CRYAAHHF--SDVRKAVREVARVLKQDGRFLLVDHYAPEDPVLDEFVN-----HLNRLRDPSHVRESSLSEWQAMFSANQ 165 (239)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECBCSSHHHHHHHH-----HHHHHHCTTCCCCCBHHHHHHHHHHTT
T ss_pred ECCchhhc--cCHHHHHHHHHHHcCCCcEEEEEEcCCCCChhHHHHHH-----HHHHhccccccCCCCHHHHHHHHHHCC
Confidence 99999999 67889999999999999999998765433221110000 000001122334578999999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|.++....
T Consensus 166 f~~~~~~~ 173 (239)
T 1xxl_A 166 LAYQDIQK 173 (239)
T ss_dssp EEEEEEEE
T ss_pred CcEEEEEe
Confidence 99887643
No 31
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.82 E-value=3.5e-19 Score=158.61 Aligned_cols=149 Identities=21% Similarity=0.302 Sum_probs=106.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-----------------------------
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP----------------------------- 157 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----------------------------- 157 (352)
++.+|||||||+|..+..++.. .+.+|+|+|+|+.|++.|++++....
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS---HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG---GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc---CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 3789999999999954433332 45699999999999999988543210
Q ss_pred --CceEEEEecCCCCC-CC-CCCCCCcceEEEehhhhhccCh--hHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhh
Q psy11741 158 --DRCHAFVCDVTSED-WN-PPFAPESLDIVLLIFVLDAINP--NKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFK 231 (352)
Q Consensus 158 --~~v~~~~~d~~~~~-~~-~~~~~~~fD~V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~ 231 (352)
..+.++.+|+.... .. ..+++++||+|++.++++|+.+ +++..++++++++|||||+|++.....
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~--------- 218 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALE--------- 218 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEES---------
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecC---------
Confidence 01456777887521 10 1234577999999999999543 589999999999999999999974211
Q ss_pred cCccccCceeecCCCe-eeeccCHHHHHHHHHhCCCceEEeee
Q psy11741 232 KGRCLQDNFYARGDGT-LVYFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 232 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
..++..+... ...+++.+++.++++++||.++....
T Consensus 219 ------~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 255 (289)
T 2g72_A 219 ------ESWYLAGEARLTVVPVSEEEVREALVRSGYKVRDLRT 255 (289)
T ss_dssp ------CCEEEETTEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred ------cceEEcCCeeeeeccCCHHHHHHHHHHcCCeEEEeeE
Confidence 1122222222 23468999999999999999988754
No 32
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.82 E-value=6e-20 Score=162.72 Aligned_cols=152 Identities=20% Similarity=0.229 Sum_probs=114.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++ ++.+|+|+|+|+.|++.|+++. .++.+.++|+.. +++ +++||+|++
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~-~~~fD~v~~ 123 (279)
T 3ccf_A 57 PGEFILDLGCGTGQLTEKIAQ----SGAEVLGTDNAATMIEKARQNY----PHLHFDVADARN----FRV-DKPLDAVFS 123 (279)
T ss_dssp TTCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHC----TTSCEEECCTTT----CCC-SSCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHh----CCCeEEEEECCHHHHHHHHhhC----CCCEEEECChhh----CCc-CCCcCEEEE
Confidence 378999999999999999998 7789999999999999998875 468899999874 444 579999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccC-ceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQD-NFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
..+++|+ .++..++++++++|||||++++..+...............+.. ............+++.+++..+++++|
T Consensus 124 ~~~l~~~--~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 201 (279)
T 3ccf_A 124 NAMLHWV--KEPEAAIASIHQALKSGGRFVAEFGGKGNIKYILEALYNALETLGIHNPQALNPWYFPSIGEYVNILEKQG 201 (279)
T ss_dssp ESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECTTTTHHHHHHHHHHHHHHTCCCGGGGCCCCCCCHHHHHHHHHHHT
T ss_pred cchhhhC--cCHHHHHHHHHHhcCCCcEEEEEecCCcchHHHHHHHHHHHHhcCCccccCcCceeCCCHHHHHHHHHHcC
Confidence 9999999 6788999999999999999999877654321111000000000 000001112234678999999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|.++....
T Consensus 202 f~~~~~~~ 209 (279)
T 3ccf_A 202 FDVTYAAL 209 (279)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 99987653
No 33
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.81 E-value=1.5e-19 Score=154.77 Aligned_cols=153 Identities=14% Similarity=0.212 Sum_probs=111.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++ .++.+...|+.+.........++||+|++.
T Consensus 53 ~~~vLdiG~G~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~ 123 (227)
T 3e8s_A 53 PERVLDLGCGEGWLLRALAD----RGIEAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICAN 123 (227)
T ss_dssp CSEEEEETCTTCHHHHHHHT----TTCEEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEE
T ss_pred CCEEEEeCCCCCHHHHHHHH----CCCEEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEEC
Confidence 68999999999999999988 567999999999999999987 346778877764311111234569999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCcee---ecCCCeeeeccCHHHHHHHHHhC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFY---ARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
.+++ . .++..++++++++|+|||++++.++++.......+.. ......+. ........++++.+++..+++++
T Consensus 124 ~~l~-~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 199 (227)
T 3e8s_A 124 FALL-H--QDIIELLSAMRTLLVPGGALVIQTLHPWSVADGDYQD-GWREESFAGFAGDWQPMPWYFRTLASWLNALDMA 199 (227)
T ss_dssp SCCC-S--SCCHHHHHHHHHTEEEEEEEEEEECCTTTTCTTCCSC-EEEEECCTTSSSCCCCEEEEECCHHHHHHHHHHT
T ss_pred chhh-h--hhHHHHHHHHHHHhCCCeEEEEEecCccccCcccccc-ccchhhhhccccCcccceEEEecHHHHHHHHHHc
Confidence 9998 4 6778999999999999999999987654321110000 00000000 01123455678999999999999
Q ss_pred CCceEEeee
Q psy11741 265 GFVEKQNLI 273 (352)
Q Consensus 265 Gf~~~~~~~ 273 (352)
||.++.+..
T Consensus 200 Gf~~~~~~~ 208 (227)
T 3e8s_A 200 GLRLVSLQE 208 (227)
T ss_dssp TEEEEEEEC
T ss_pred CCeEEEEec
Confidence 999988643
No 34
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.81 E-value=1.7e-19 Score=161.28 Aligned_cols=149 Identities=15% Similarity=0.121 Sum_probs=114.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.. +.+|+|+|+|+.|++.|+++.... ..++.+.++|+. .+++++++||+|
T Consensus 82 ~~~~vLDiGcG~G~~~~~l~~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~fD~v 154 (297)
T 2o57_A 82 RQAKGLDLGAGYGGAARFLVRKF---GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL----EIPCEDNSYDFI 154 (297)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT----SCSSCTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHh---CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc----cCCCCCCCEeEE
Confidence 47899999999999999999864 459999999999999999887543 357999999987 456678899999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..+++|+ .++..++++++++|||||++++.++........... ..++... ....+.+.+++..+++++
T Consensus 155 ~~~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~------~~~~~~~--~~~~~~~~~~~~~~l~~a 224 (297)
T 2o57_A 155 WSQDAFLHS--PDKLKVFQECARVLKPRGVMAITDPMKEDGIDKSSI------QPILDRI--KLHDMGSLGLYRSLAKEC 224 (297)
T ss_dssp EEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEECTTCCGGGG------HHHHHHH--TCSSCCCHHHHHHHHHHT
T ss_pred Eecchhhhc--CCHHHHHHHHHHHcCCCeEEEEEEeccCCCCchHHH------HHHHHHh--cCCCCCCHHHHHHHHHHC
Confidence 999999999 568999999999999999999987643321100000 0000000 001246899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||.++...
T Consensus 225 Gf~~~~~~ 232 (297)
T 2o57_A 225 GLVTLRTF 232 (297)
T ss_dssp TEEEEEEE
T ss_pred CCeEEEEE
Confidence 99988764
No 35
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.81 E-value=6.8e-19 Score=154.35 Aligned_cols=151 Identities=15% Similarity=0.221 Sum_probs=112.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++ .+.+++|+|+|+.|++.|+++......++.+.++|+. .+++++++||+|++
T Consensus 39 ~~~~vLDiG~G~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~----~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 39 EEPVFLELGVGTGRIALPLIA----RGYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADAR----AIPLPDESVHGVIV 110 (263)
T ss_dssp SCCEEEEETCTTSTTHHHHHT----TTCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTT----SCCSCTTCEEEEEE
T ss_pred CCCEEEEeCCcCCHHHHHHHH----CCCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccc----cCCCCCCCeeEEEE
Confidence 378999999999999999998 4679999999999999999987434578999999997 44566789999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCc-hh---hHhhhcCccccCceeecCCCeeeeccCHHHHHHHHH
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYD-LV---QLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 262 (352)
..+++|+ .+...+++++.++|+|||.+++. +.... .. ...... ..... ..........+++.+++.++++
T Consensus 111 ~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~-~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 184 (263)
T 2yqz_A 111 VHLWHLV--PDWPKVLAEAIRVLKPGGALLEG-WDQAEASPEWTLQERWR-AFAAE--EGFPVERGLHAKRLKEVEEALR 184 (263)
T ss_dssp ESCGGGC--TTHHHHHHHHHHHEEEEEEEEEE-EEEECCCHHHHHHHHHH-HHHHH--HTCCCCCCHHHHHHHHHHHHHH
T ss_pred CCchhhc--CCHHHHHHHHHHHCCCCcEEEEE-ecCCCccHHHHHHHHHH-HHHHH--hCCCcccccccCCHHHHHHHHH
Confidence 9999999 67889999999999999999987 22210 01 000000 00000 0000111334678899999999
Q ss_pred hCCCceEEe
Q psy11741 263 SAGFVEKQN 271 (352)
Q Consensus 263 ~~Gf~~~~~ 271 (352)
++||.++..
T Consensus 185 ~~Gf~~~~~ 193 (263)
T 2yqz_A 185 RLGLKPRTR 193 (263)
T ss_dssp HTTCCCEEE
T ss_pred HcCCCcceE
Confidence 999997765
No 36
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.81 E-value=8.6e-20 Score=168.90 Aligned_cols=159 Identities=18% Similarity=0.268 Sum_probs=118.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC---------CCceEEEEecCCCCCC--CCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK---------PDRCHAFVCDVTSEDW--NPP 175 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~---------~~~v~~~~~d~~~~~~--~~~ 175 (352)
++.+|||+|||+|.++..+++.+. ++.+|+|+|+|+.|++.|++++... ..++.++++|+.+... ..+
T Consensus 83 ~~~~VLDlGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 83 EGATVLDLGCGTGRDVYLASKLVG-EHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHT-TTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCEEEEecCccCHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 478999999999999999998764 5679999999999999999986422 2689999999974210 116
Q ss_pred CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHH
Q psy11741 176 FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTRE 255 (352)
Q Consensus 176 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (352)
+++++||+|++..+++|+ .++..++++++++|||||+|++.++................ + .......++.+
T Consensus 162 ~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~~~ 232 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLS--TNKLALFKEIHRVLRDGGELYFSDVYADRRLSEAAQQDPIL----Y---GECLGGALYLE 232 (383)
T ss_dssp CCTTCEEEEEEESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEEEESSCCCHHHHHCHHH----H---HTTCTTCCBHH
T ss_pred CCCCCEEEEEEccchhcC--CCHHHHHHHHHHHcCCCCEEEEEEeccccccCHhHhhhHHH----h---hcccccCCCHH
Confidence 678899999999999999 67899999999999999999998754321110000000000 0 00111246789
Q ss_pred HHHHHHHhCCCceEEeeeee
Q psy11741 256 EVKTMFESAGFVEKQNLIDR 275 (352)
Q Consensus 256 ~~~~ll~~~Gf~~~~~~~~~ 275 (352)
++..+++++||..++.....
T Consensus 233 ~~~~ll~~aGF~~v~~~~~~ 252 (383)
T 4fsd_A 233 DFRRLVAEAGFRDVRLVSVG 252 (383)
T ss_dssp HHHHHHHHTTCCCEEEEEEE
T ss_pred HHHHHHHHCCCceEEEEecc
Confidence 99999999999988765433
No 37
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.81 E-value=2.1e-19 Score=155.89 Aligned_cols=156 Identities=15% Similarity=0.269 Sum_probs=116.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.|++.|+++....+.++.+.++|+.+ ++++ ++||+|++.
T Consensus 38 ~~~vLdiG~G~G~~~~~l~~----~~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~-~~fD~v~~~ 108 (246)
T 1y8c_A 38 FDDYLDLACGTGNLTENLCP----KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISN----LNIN-RKFDLITCC 108 (246)
T ss_dssp TTEEEEETCTTSTTHHHHGG----GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGG----CCCS-CCEEEEEEC
T ss_pred CCeEEEeCCCCCHHHHHHHH----CCCcEEEEECCHHHHHHHHHHHhhcCCCeEEEeccccc----CCcc-CCceEEEEc
Confidence 78999999999999999988 45689999999999999999876555579999999874 3343 789999999
Q ss_pred h-hhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCc---------cccCc------------eeecC
Q psy11741 188 F-VLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGR---------CLQDN------------FYARG 244 (352)
Q Consensus 188 ~-~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~---------~~~~~------------~~~~~ 244 (352)
. +++|+ ++++...++++++++|+|||.+++...++...... +.... ..+.. ++...
T Consensus 109 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (246)
T 1y8c_A 109 LDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDINSYYKLSQV-LGNNDFNYDDDEVFYYWENQFEDDLVSMYISFFVRD 187 (246)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHTT-TTTCCEEEEETTEEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CccccccCCHHHHHHHHHHHHHhcCCCcEEEEEecCHHHHHhh-cCcceEEecCCcEEEEEecccCCceEEEEEEEEEec
Confidence 8 99999 55789999999999999999999976653221110 00000 00000 00001
Q ss_pred C--------CeeeeccCHHHHHHHHHhCCCceEEeee
Q psy11741 245 D--------GTLVYFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 245 ~--------~~~~~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
+ ..+..+++.+++..+++++||+++....
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~ 224 (246)
T 1y8c_A 188 GEFYKRFDEEHEERAYKEEDIEKYLKHGQLNILDKVD 224 (246)
T ss_dssp SSSEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCcccccEEEEEEEcCCHHHHHHHHHHCCCeEEEEEc
Confidence 1 1234678999999999999999988754
No 38
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.81 E-value=1.2e-19 Score=161.11 Aligned_cols=159 Identities=12% Similarity=0.137 Sum_probs=114.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++.++ .+.+|+|+|+|+.+++.|+++....+.++.+.++|+.+ +++ +++||+|++
T Consensus 22 ~~~~vLDiGcG~G~~~~~l~~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~v~~ 95 (284)
T 3gu3_A 22 KPVHIVDYGCGYGYLGLVLMPLLP-EGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATE----IEL-NDKYDIAIC 95 (284)
T ss_dssp SCCEEEEETCTTTHHHHHHTTTSC-TTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTT----CCC-SSCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhh----cCc-CCCeeEEEE
Confidence 478999999999999999999762 25899999999999999999987666689999999984 344 469999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchh-hHhhhcCc-------cccCceee-cCCCeeeeccCHHHH
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLV-QLRFKKGR-------CLQDNFYA-RGDGTLVYFFTREEV 257 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~ 257 (352)
..+++|+ .+...++++++++|||||++++.++...... ......+. ......+. ........+....++
T Consensus 96 ~~~l~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 173 (284)
T 3gu3_A 96 HAFLLHM--TTPETMLQKMIHSVKKGGKIICFEPHWISNMASYLLDGEKQSEFIQLGVLQKLFESDTQRNGKDGNIGMKI 173 (284)
T ss_dssp ESCGGGC--SSHHHHHHHHHHTEEEEEEEEEEECCHHHHHHSEEETTSCHHHHCCHHHHHHHHHHHHHHTCCCTTGGGTH
T ss_pred CChhhcC--CCHHHHHHHHHHHcCCCCEEEEEecchhcccccceecCcchhhccchHHHHHHHHHHhhhhcccccHHHHH
Confidence 9999999 6778999999999999999999887611000 00000000 00000000 000011123456689
Q ss_pred HHHHHhCCCceEEeee
Q psy11741 258 KTMFESAGFVEKQNLI 273 (352)
Q Consensus 258 ~~ll~~~Gf~~~~~~~ 273 (352)
..+++++||..+....
T Consensus 174 ~~~l~~aGF~~v~~~~ 189 (284)
T 3gu3_A 174 PIYLSELGVKNIECRV 189 (284)
T ss_dssp HHHHHHTTCEEEEEEE
T ss_pred HHHHHHcCCCeEEEEE
Confidence 9999999999887643
No 39
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=3.2e-19 Score=156.09 Aligned_cols=150 Identities=12% Similarity=0.107 Sum_probs=111.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++.+ ++.+++|+|+|+.|++.|+++. .++.+.++|+.. ++ ++++||+|++
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~----~~-~~~~fD~v~~ 101 (259)
T 2p35_A 33 RVLNGYDLGCGPGNSTELLTDRY--GVNVITGIDSDDDMLEKAADRL----PNTNFGKADLAT----WK-PAQKADLLYA 101 (259)
T ss_dssp CCSSEEEETCTTTHHHHHHHHHH--CTTSEEEEESCHHHHHHHHHHS----TTSEEEECCTTT----CC-CSSCEEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHhC----CCcEEEECChhh----cC-ccCCcCEEEE
Confidence 47899999999999999999976 6779999999999999999872 568999999874 34 4789999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhc---CccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKK---GRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
..+++|+ .++..++++++++|+|||.+++.+++........... ....+.............+++.+++.+++++
T Consensus 102 ~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 179 (259)
T 2p35_A 102 NAVFQWV--PDHLAVLSQLMDQLESGGVLAVQMPDNLQEPTHIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSP 179 (259)
T ss_dssp ESCGGGS--TTHHHHHHHHGGGEEEEEEEEEEEECCTTSHHHHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGG
T ss_pred eCchhhC--CCHHHHHHHHHHhcCCCeEEEEEeCCCCCcHHHHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHh
Confidence 9999999 7889999999999999999999876543211110000 0000000000000123456899999999999
Q ss_pred CCCceE
Q psy11741 264 AGFVEK 269 (352)
Q Consensus 264 ~Gf~~~ 269 (352)
+||.+.
T Consensus 180 aGf~v~ 185 (259)
T 2p35_A 180 KSSRVD 185 (259)
T ss_dssp GEEEEE
T ss_pred cCCceE
Confidence 999754
No 40
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.80 E-value=2.8e-19 Score=152.39 Aligned_cols=151 Identities=15% Similarity=0.252 Sum_probs=111.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC------CceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP------DRCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|++++...+ .++.+.++|+. ..+.+.++|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~----~~~~~~~~f 103 (217)
T 3jwh_A 30 ARRVIDLGCGQGNLLKILLKDS--FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALT----YQDKRFHGY 103 (217)
T ss_dssp CCEEEEETCTTCHHHHHHHHCT--TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTT----SCCGGGCSC
T ss_pred CCEEEEeCCCCCHHHHHHHhhC--CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcc----cccccCCCc
Confidence 7799999999999999999854 55799999999999999999875432 27999999985 334446799
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHH---
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVK--- 258 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 258 (352)
|+|++..+++|++.++...+++++.++|||||++++....... ..+ .. +.. .......+...++.+++.
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~---~~~--~~-~~~--~~~~~~~~~~~~~~~~l~~~~ 175 (217)
T 3jwh_A 104 DAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYN---VKF--AN-LPA--GKLRHKDHRFEWTRSQFQNWA 175 (217)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHH---HHT--C--------------CCSCBCHHHHHHHH
T ss_pred CEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccc---hhh--cc-ccc--ccccccccccccCHHHHHHHH
Confidence 9999999999997777899999999999999977775432111 000 00 000 001112333457899998
Q ss_pred -HHHHhCCCceEEee
Q psy11741 259 -TMFESAGFVEKQNL 272 (352)
Q Consensus 259 -~ll~~~Gf~~~~~~ 272 (352)
.+++++||++....
T Consensus 176 ~~~~~~~Gf~v~~~~ 190 (217)
T 3jwh_A 176 NKITERFAYNVQFQP 190 (217)
T ss_dssp HHHHHHSSEEEEECC
T ss_pred HHHHHHcCceEEEEe
Confidence 89999999886653
No 41
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.80 E-value=9.8e-19 Score=151.47 Aligned_cols=154 Identities=19% Similarity=0.272 Sum_probs=112.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++ .+. +++|+|+|+.|++.|+++... .++.+.++|+.. +++++++||+|+
T Consensus 43 ~~~~vLdiG~G~G~~~~~l~~----~~~~~v~~vD~s~~~~~~a~~~~~~--~~~~~~~~d~~~----~~~~~~~fD~v~ 112 (243)
T 3bkw_A 43 GGLRIVDLGCGFGWFCRWAHE----HGASYVLGLDLSEKMLARARAAGPD--TGITYERADLDK----LHLPQDSFDLAY 112 (243)
T ss_dssp TTCEEEEETCTTCHHHHHHHH----TTCSEEEEEESCHHHHHHHHHTSCS--SSEEEEECCGGG----CCCCTTCEEEEE
T ss_pred CCCEEEEEcCcCCHHHHHHHH----CCCCeEEEEcCCHHHHHHHHHhccc--CCceEEEcChhh----ccCCCCCceEEE
Confidence 378999999999999999988 444 899999999999999988653 368999999874 345578999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHh--h---hcCcc--ccCceee--------cCCCeeee
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLR--F---KKGRC--LQDNFYA--------RGDGTLVY 250 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~--~---~~~~~--~~~~~~~--------~~~~~~~~ 250 (352)
+..+++|+ .+...++++++++|+|||.+++.+.++....... . ..+.. ....++. .......+
T Consensus 113 ~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (243)
T 3bkw_A 113 SSLALHYV--EDVARLFRTVHQALSPGGHFVFSTEHPIYMAPARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAKGVVKH 190 (243)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECHHHHCCSSCSCEECTTSCEEEEECCTTCCEEECTTHHHHSCCEE
T ss_pred Eecccccc--chHHHHHHHHHHhcCcCcEEEEEeCCcccccCcCcceeecCCCceEEeecccccccceeeeeccCceEEE
Confidence 99999999 6788999999999999999999875431100000 0 00000 0000000 00022234
Q ss_pred ccCHHHHHHHHHhCCCceEEee
Q psy11741 251 FFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 251 ~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
.++.+++..+++++||+++...
T Consensus 191 ~~t~~~~~~~l~~aGF~~~~~~ 212 (243)
T 3bkw_A 191 HRTVGTTLNALIRSGFAIEHVE 212 (243)
T ss_dssp ECCHHHHHHHHHHTTCEEEEEE
T ss_pred eccHHHHHHHHHHcCCEeeeec
Confidence 4689999999999999998764
No 42
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.80 E-value=1e-19 Score=158.64 Aligned_cols=100 Identities=19% Similarity=0.321 Sum_probs=87.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||||||+|..+..|++ .+.+|+|+|+|+.|++.|+++ +++.+.++|+. .+++++++||+|++.
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~----~~~~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e----~~~~~~~sfD~v~~~ 106 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAE----FFERVHAVDPGEAQIRQALRH-----PRVTYAVAPAE----DTGLPPASVDVAIAA 106 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHT----TCSEEEEEESCHHHHHTCCCC-----TTEEEEECCTT----CCCCCSSCEEEEEEC
T ss_pred CCCEEEEcCCCCHHHHHHHH----hCCEEEEEeCcHHhhhhhhhc-----CCceeehhhhh----hhcccCCcccEEEEe
Confidence 57899999999999999998 566999999999999987653 57999999987 567789999999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY 223 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 223 (352)
.++|+++ ...++++++++|||||+|++..++..
T Consensus 107 ~~~h~~~---~~~~~~e~~rvLkpgG~l~~~~~~~~ 139 (257)
T 4hg2_A 107 QAMHWFD---LDRFWAELRRVARPGAVFAAVTYGLT 139 (257)
T ss_dssp SCCTTCC---HHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred eehhHhh---HHHHHHHHHHHcCCCCEEEEEECCCC
Confidence 9999883 56799999999999999998876654
No 43
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.80 E-value=1.3e-19 Score=160.15 Aligned_cols=154 Identities=17% Similarity=0.272 Sum_probs=115.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||||||+|.++..+++.. ++.+++|+|+|+.+++.|+++....+ .++.+..+|+.. +++++++||+|+
T Consensus 37 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~~~~~fD~v~ 110 (276)
T 3mgg_A 37 PGAKVLEAGCGIGAQTVILAKNN--PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFS----LPFEDSSFDHIF 110 (276)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC--TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGG----CCSCTTCEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEccccc----CCCCCCCeeEEE
Confidence 47899999999999999999975 67899999999999999999876543 579999999983 456678999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCch------hhHhhhcCccccCceeecCCCeeeeccCHHHHHH
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDL------VQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKT 259 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (352)
+..+++|+ .+...+++++.++|||||++++.+...... ....... ..............++..++..
T Consensus 111 ~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~l~~ 183 (276)
T 3mgg_A 111 VCFVLEHL--QSPEEALKSLKKVLKPGGTITVIEGDHGSCYFHPEGKKAIEAW-----NCLIRVQAYMKGNSLVGRQIYP 183 (276)
T ss_dssp EESCGGGC--SCHHHHHHHHHHHEEEEEEEEEEEECGGGCEEESCCHHHHHHH-----HHHHHHHHHTTCCTTGGGGHHH
T ss_pred Eechhhhc--CCHHHHHHHHHHHcCCCcEEEEEEcCCCCceECCCcHHHHHHH-----HHHHHHHHhcCCCcchHHHHHH
Confidence 99999999 667799999999999999999987543111 0000000 0000000000012245678999
Q ss_pred HHHhCCCceEEeee
Q psy11741 260 MFESAGFVEKQNLI 273 (352)
Q Consensus 260 ll~~~Gf~~~~~~~ 273 (352)
+++++||.++....
T Consensus 184 ~l~~aGf~~v~~~~ 197 (276)
T 3mgg_A 184 LLQESGFEKIRVEP 197 (276)
T ss_dssp HHHHTTCEEEEEEE
T ss_pred HHHHCCCCeEEEee
Confidence 99999999988754
No 44
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.80 E-value=1.5e-19 Score=157.91 Aligned_cols=147 Identities=18% Similarity=0.189 Sum_probs=113.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.. +.+++|+|+|+.|++.|+++....+ .++.+.++|+.+ +++ +++||+|
T Consensus 36 ~~~~VLDiGcG~G~~~~~la~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~----~~~-~~~fD~V 107 (256)
T 1nkv_A 36 PGTRILDLGSGSGEMLCTWARDH---GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG----YVA-NEKCDVA 107 (256)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHT---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT----CCC-SSCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc---CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh----CCc-CCCCCEE
Confidence 47899999999999999999863 5689999999999999999876543 479999999974 344 6899999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhh-HhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQ-LRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
++..+++|+ .++..+|++++++|||||.+++.+........ ..+.. . ........+++.+++..++++
T Consensus 108 ~~~~~~~~~--~~~~~~l~~~~r~LkpgG~l~~~~~~~~~~~~~~~~~~------~---~~~~~~~~~~~~~~~~~~l~~ 176 (256)
T 1nkv_A 108 ACVGATWIA--GGFAGAEELLAQSLKPGGIMLIGEPYWRQLPATEEIAQ------A---CGVSSTSDFLTLPGLVGAFDD 176 (256)
T ss_dssp EEESCGGGT--SSSHHHHHHHTTSEEEEEEEEEEEEEETTCCSSHHHHH------T---TTCSCGGGSCCHHHHHHHHHT
T ss_pred EECCChHhc--CCHHHHHHHHHHHcCCCeEEEEecCcccCCCChHHHHH------H---HhcccccccCCHHHHHHHHHH
Confidence 999999999 57899999999999999999997643211100 00000 0 001122356889999999999
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
+||.++...
T Consensus 177 aGf~~~~~~ 185 (256)
T 1nkv_A 177 LGYDVVEMV 185 (256)
T ss_dssp TTBCCCEEE
T ss_pred CCCeeEEEE
Confidence 999988753
No 45
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.80 E-value=7.1e-19 Score=156.88 Aligned_cols=141 Identities=13% Similarity=0.277 Sum_probs=103.9
Q ss_pred hHHhhhhHHHHhhhcccccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC
Q psy11741 62 NEDVAKNWDAFYNVHQNRFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF 141 (352)
Q Consensus 62 ~~~~~~yw~~~y~~~~~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~ 141 (352)
.....++|+.++......+..-. ..+..+++.. ++.+|||||||+|.++..+++ .+.+|+|+|+
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~l~~~--------~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~ 87 (293)
T 3thr_A 24 DGEAARVWQLYIGDTRSRTAEYK----AWLLGLLRQH--------GCHRVLDVACGTGVDSIMLVE----EGFSVTSVDA 87 (293)
T ss_dssp TCHHHHHHHHHHTCCSCBCHHHH----HHHHHHHHHT--------TCCEEEETTCTTSHHHHHHHH----TTCEEEEEES
T ss_pred CchHHHHHHHHHhcCcchHHHHH----HHHHHHhccc--------CCCEEEEecCCCCHHHHHHHH----CCCeEEEEEC
Confidence 34556678877754332221112 2222233221 278999999999999999998 5669999999
Q ss_pred CHHHHHHHHhccccC-----CCceEEEEecCCCCCCCCC---CCCCcceEEEeh-hhhhccCh-----hHHHHHHHHHHH
Q psy11741 142 SENAVNILKEHEEYK-----PDRCHAFVCDVTSEDWNPP---FAPESLDIVLLI-FVLDAINP-----NKMQHVINQVYK 207 (352)
Q Consensus 142 s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~---~~~~~fD~V~~~-~~l~~~~~-----~~~~~~l~~~~~ 207 (352)
|+.|++.|+++.... ..++.+..+|+.. ++ +++++||+|++. .+++|+.. +++..+++++++
T Consensus 88 s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~----~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~ 163 (293)
T 3thr_A 88 SDKMLKYALKERWNRRKEPAFDKWVIEEANWLT----LDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIAS 163 (293)
T ss_dssp CHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGG----HHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhcccccccceeeEeecChhh----CccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHH
Confidence 999999998865221 1457788888763 33 457899999998 89999954 569999999999
Q ss_pred hcCCCEEEEEEeCCC
Q psy11741 208 YLKPGGMVLFRDYGR 222 (352)
Q Consensus 208 ~LkpgG~l~~~~~~~ 222 (352)
+|||||++++..++.
T Consensus 164 ~LkpgG~l~~~~~~~ 178 (293)
T 3thr_A 164 MVRPGGLLVIDHRNY 178 (293)
T ss_dssp TEEEEEEEEEEEECH
T ss_pred HcCCCeEEEEEeCCH
Confidence 999999999987653
No 46
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.80 E-value=1e-18 Score=149.11 Aligned_cols=141 Identities=21% Similarity=0.340 Sum_probs=109.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++. . +|+|+|+.+++.|+++ ++.+.++|+.. +++++++||+|++.
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~----~----~~vD~s~~~~~~a~~~------~~~~~~~d~~~----~~~~~~~fD~v~~~ 109 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKI----K----IGVEPSERMAEIARKR------GVFVLKGTAEN----LPLKDESFDFALMV 109 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTC----C----EEEESCHHHHHHHHHT------TCEEEECBTTB----CCSCTTCEEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHH----H----hccCCCHHHHHHHHhc------CCEEEEccccc----CCCCCCCeeEEEEc
Confidence 67999999999999988876 3 9999999999999886 47899999873 45567899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|+ .++..+++++.++|+|||.+++.+++............ ... ........+++.+++..+++++||+
T Consensus 110 ~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~~~~~~l~~~l~~~Gf~ 181 (219)
T 1vlm_A 110 TTICFV--DDPERALKEAYRILKKGGYLIVGIVDRESFLGREYEKN-KEK-----SVFYKNARFFSTEELMDLMRKAGFE 181 (219)
T ss_dssp SCGGGS--SCHHHHHHHHHHHEEEEEEEEEEEECSSSHHHHHHHHT-TTC------CCSTTCCCCCHHHHHHHHHHTTCE
T ss_pred chHhhc--cCHHHHHHHHHHHcCCCcEEEEEEeCCccHHHHHHHHH-hcC-----cchhcccccCCHHHHHHHHHHCCCe
Confidence 999999 67889999999999999999998876543221111110 000 0011223568999999999999999
Q ss_pred eEEeeee
Q psy11741 268 EKQNLID 274 (352)
Q Consensus 268 ~~~~~~~ 274 (352)
++.....
T Consensus 182 ~~~~~~~ 188 (219)
T 1vlm_A 182 EFKVVQT 188 (219)
T ss_dssp EEEEEEE
T ss_pred EEEEecc
Confidence 9887554
No 47
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.80 E-value=6.3e-19 Score=149.67 Aligned_cols=141 Identities=21% Similarity=0.262 Sum_probs=108.6
Q ss_pred hhhhHHHHhhhccc----ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEe
Q psy11741 65 VAKNWDAFYNVHQN----RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCD 140 (352)
Q Consensus 65 ~~~yw~~~y~~~~~----~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD 140 (352)
..+||+.+|..... .++.....+...+...+ .++.+|||+|||+|.++..+++.. .. +++|+|
T Consensus 6 ~~~~W~~~y~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~vLdiGcG~G~~~~~l~~~~--~~-~v~~~D 72 (215)
T 2pxx_A 6 EVEYWDQRYQGAADSAPYDWFGDFSSFRALLEPEL----------RPEDRILVLGCGNSALSYELFLGG--FP-NVTSVD 72 (215)
T ss_dssp CHHHHHHHTTTTTTSCCCCTTCCHHHHHHHHGGGC----------CTTCCEEEETCTTCSHHHHHHHTT--CC-CEEEEE
T ss_pred chhHHHHHhccCCCCCCcccccCHHHHHHHHHHhc----------CCCCeEEEECCCCcHHHHHHHHcC--CC-cEEEEe
Confidence 45789999986652 34444433333333332 237899999999999999999853 22 899999
Q ss_pred CCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEehhhhhccC-------------hhHHHHHHHHHHH
Q psy11741 141 FSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLDAIN-------------PNKMQHVINQVYK 207 (352)
Q Consensus 141 ~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~-------------~~~~~~~l~~~~~ 207 (352)
+|+.+++.|+++... ..++.+.++|+.+ +++++++||+|++..+++++. ..+...+++++.+
T Consensus 73 ~s~~~~~~a~~~~~~-~~~i~~~~~d~~~----~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 147 (215)
T 2pxx_A 73 YSSVVVAAMQACYAH-VPQLRWETMDVRK----LDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSR 147 (215)
T ss_dssp SCHHHHHHHHHHTTT-CTTCEEEECCTTS----CCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhccc-CCCcEEEEcchhc----CCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHH
Confidence 999999999998754 3578999999874 456678999999988887763 3577899999999
Q ss_pred hcCCCEEEEEEeCCCC
Q psy11741 208 YLKPGGMVLFRDYGRY 223 (352)
Q Consensus 208 ~LkpgG~l~~~~~~~~ 223 (352)
+|+|||.+++.+++.+
T Consensus 148 ~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 148 VLVPGGRFISMTSAAP 163 (215)
T ss_dssp HEEEEEEEEEEESCCH
T ss_pred hCcCCCEEEEEeCCCc
Confidence 9999999999887653
No 48
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.80 E-value=3.1e-19 Score=157.49 Aligned_cols=153 Identities=23% Similarity=0.344 Sum_probs=115.6
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+|||||||+|.++..+++. .+.+|+|+|+|+.+++.|+++....+ .++.+..+|+. .+++++++||+
T Consensus 60 ~~~~~vLDiGcG~G~~~~~l~~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~fD~ 132 (273)
T 3bus_A 60 RSGDRVLDVGCGIGKPAVRLATA---RDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAM----DLPFEDASFDA 132 (273)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHH---SCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT----SCCSCTTCEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHh---cCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccc----cCCCCCCCccE
Confidence 34789999999999999999886 35699999999999999998876533 46999999997 45566789999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
|++..+++|+ .+...+++++.++|||||.+++.++........... ..+ ..+... .....+++.+++..++++
T Consensus 133 v~~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~--~~~-~~~~~~--~~~~~~~~~~~~~~~l~~ 205 (273)
T 3bus_A 133 VWALESLHHM--PDRGRALREMARVLRPGGTVAIADFVLLAPVEGAKK--EAV-DAFRAG--GGVLSLGGIDEYESDVRQ 205 (273)
T ss_dssp EEEESCTTTS--SCHHHHHHHHHTTEEEEEEEEEEEEEESSCCCHHHH--HHH-HHHHHH--HTCCCCCCHHHHHHHHHH
T ss_pred EEEechhhhC--CCHHHHHHHHHHHcCCCeEEEEEEeeccCCCChhHH--HHH-HHHHhh--cCccCCCCHHHHHHHHHH
Confidence 9999999999 667899999999999999999987543211000000 000 000000 012245889999999999
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
+||.++...
T Consensus 206 aGf~~~~~~ 214 (273)
T 3bus_A 206 AELVVTSTV 214 (273)
T ss_dssp TTCEEEEEE
T ss_pred cCCeEEEEE
Confidence 999998764
No 49
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.80 E-value=3.8e-19 Score=153.68 Aligned_cols=102 Identities=14% Similarity=0.266 Sum_probs=87.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe-
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL- 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 186 (352)
+.+|||+|||+|.++..+++.. .+++|+|+|+.|++.|+++. .++.+.++|+.+ ++. +++||+|+|
T Consensus 41 ~~~vLdiG~G~G~~~~~l~~~~----~~v~~~D~s~~~~~~a~~~~----~~~~~~~~d~~~----~~~-~~~~D~v~~~ 107 (239)
T 3bxo_A 41 ASSLLDVACGTGTHLEHFTKEF----GDTAGLELSEDMLTHARKRL----PDATLHQGDMRD----FRL-GRKFSAVVSM 107 (239)
T ss_dssp CCEEEEETCTTSHHHHHHHHHH----SEEEEEESCHHHHHHHHHHC----TTCEEEECCTTT----CCC-SSCEEEEEEC
T ss_pred CCeEEEecccCCHHHHHHHHhC----CcEEEEeCCHHHHHHHHHhC----CCCEEEECCHHH----ccc-CCCCcEEEEc
Confidence 7899999999999999999854 38999999999999999875 458999999874 333 678999996
Q ss_pred hhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 187 IFVLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 187 ~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
..+++|+ ++++...++++++++|+|||.+++.++..
T Consensus 108 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 108 FSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 4489988 45788999999999999999999986554
No 50
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.80 E-value=9.6e-20 Score=159.83 Aligned_cols=144 Identities=15% Similarity=0.247 Sum_probs=110.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++ ++.+|+|+|+|+.|++.|+++. ++.+.++|+. .+++++++||+|++
T Consensus 34 ~~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~----~~~~~~~~fD~v~~ 100 (261)
T 3ege_A 34 KGSVIADIGAGTGGYSVALAN----QGLFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAE----NLALPDKSVDGVIS 100 (261)
T ss_dssp TTCEEEEETCTTSHHHHHHHT----TTCEEEEECSCHHHHHSSCCCT-----TEEEECCCTT----SCCSCTTCBSEEEE
T ss_pred CCCEEEEEcCcccHHHHHHHh----CCCEEEEEeCCHHHHHHHHhcc-----CCEEEECchh----hCCCCCCCEeEEEE
Confidence 378999999999999999998 7789999999999999887764 7999999997 45567889999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..+++|+ .++..++++++++|| ||++++.++.......... ..............+.+.+++. +++++||
T Consensus 101 ~~~l~~~--~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~-~l~~aGF 170 (261)
T 3ege_A 101 ILAIHHF--SHLEKSFQEMQRIIR-DGTIVLLTFDIRLAQRIWL------YDYFPFLWEDALRFLPLDEQIN-LLQENTK 170 (261)
T ss_dssp ESCGGGC--SSHHHHHHHHHHHBC-SSCEEEEEECGGGCCCCGG------GGTCHHHHHHHHTSCCHHHHHH-HHHHHHC
T ss_pred cchHhhc--cCHHHHHHHHHHHhC-CcEEEEEEcCCchhHHHHH------HHHHHHHhhhhhhhCCCHHHHH-HHHHcCC
Confidence 9999999 788999999999999 9988887765432110000 0000000011122356778888 9999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
..+....
T Consensus 171 ~~v~~~~ 177 (261)
T 3ege_A 171 RRVEAIP 177 (261)
T ss_dssp SEEEEEE
T ss_pred CceeEEE
Confidence 9887643
No 51
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.80 E-value=5.1e-19 Score=150.98 Aligned_cols=151 Identities=17% Similarity=0.296 Sum_probs=111.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC------CceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP------DRCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~------~~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+.+|||+|||+|.++..+++.. +..+++|+|+|+.+++.|+++....+ .++.+.++|+. ..+..+++|
T Consensus 30 ~~~vLDiGcG~G~~~~~l~~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~----~~~~~~~~f 103 (219)
T 3jwg_A 30 AKKVIDLGCGEGNLLSLLLKDK--SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLV----YRDKRFSGY 103 (219)
T ss_dssp CCEEEEETCTTCHHHHHHHTST--TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSS----SCCGGGTTC
T ss_pred CCEEEEecCCCCHHHHHHHhcC--CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccc----ccccccCCC
Confidence 7799999999999999999864 55799999999999999998865422 27999999985 344556899
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHH---
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVK--- 258 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 258 (352)
|+|++..+++|++.++...+++++.++|||||+++........... .. +.. .......+...++.+++.
T Consensus 104 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~-----~~-~~~--~~~~~~~~~~~~~~~~l~~~~ 175 (219)
T 3jwg_A 104 DAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHY-----GN-LFE--GNLRHRDHRFEWTRKEFQTWA 175 (219)
T ss_dssp SEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCC-----CC-T-------GGGCCTTSBCHHHHHHHH
T ss_pred CEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhh-----cc-cCc--ccccccCceeeecHHHHHHHH
Confidence 9999999999997777799999999999999976665332111000 00 000 000112233457899998
Q ss_pred -HHHHhCCCceEEee
Q psy11741 259 -TMFESAGFVEKQNL 272 (352)
Q Consensus 259 -~ll~~~Gf~~~~~~ 272 (352)
.+++++||++....
T Consensus 176 ~~l~~~~Gf~v~~~~ 190 (219)
T 3jwg_A 176 VKVAEKYGYSVRFLQ 190 (219)
T ss_dssp HHHHHHHTEEEEEEE
T ss_pred HHHHHHCCcEEEEEe
Confidence 88999999876543
No 52
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.79 E-value=6.4e-19 Score=158.16 Aligned_cols=160 Identities=13% Similarity=0.107 Sum_probs=115.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|..+..++.... ++.+|+|+|+|+.+++.|+++....+ .+++++++|+.+ ++++ ++||+|
T Consensus 118 ~~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~fD~v 191 (305)
T 3ocj_A 118 PGCVVASVPCGWMSELLALDYSAC-PGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWK----LDTR-EGYDLL 191 (305)
T ss_dssp TTCEEEETTCTTCHHHHTSCCTTC-TTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGG----CCCC-SCEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhcC-CCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhc----CCcc-CCeEEE
Confidence 478999999999999999863221 78899999999999999999886543 349999999984 4444 899999
Q ss_pred Eehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCc-cccC-------ceeecC-CCeeeeccCH
Q psy11741 185 LLIFVLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGR-CLQD-------NFYARG-DGTLVYFFTR 254 (352)
Q Consensus 185 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~-~~~~-------~~~~~~-~~~~~~~~~~ 254 (352)
++..+++|+ ++.....++++++++|||||++++.++.............. .... ..+... ......+++.
T Consensus 192 ~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (305)
T 3ocj_A 192 TSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTPPPALSPDSPWDMQAIDPHDLQLQQLVFTRLIQPRWNALRTH 271 (305)
T ss_dssp ECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCTTTCTTCCCCGGGSCHHHHHHHHHHHHHTTCCSCCCCCCH
T ss_pred EECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCCCCcccccccceeeccccchhhhhhhHHHHHHhhhhhccCCH
Confidence 999999998 45555678999999999999999988654322111000000 0000 000000 1122245899
Q ss_pred HHHHHHHHhCCCceEEee
Q psy11741 255 EEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 255 ~~~~~ll~~~Gf~~~~~~ 272 (352)
+++..+++++||+++...
T Consensus 272 ~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 272 AQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 999999999999998875
No 53
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.79 E-value=1.5e-18 Score=148.89 Aligned_cols=153 Identities=26% Similarity=0.284 Sum_probs=114.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++. ..+..+|+... ..++++++||+|++
T Consensus 32 ~~~~vLdiG~G~G~~~~~l~~~----~~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~--~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 32 EWKEVLDIGCSSGALGAAIKEN----GTRVSGIEAFPEAAEQAKEKL------DHVVLGDIETM--DMPYEEEQFDCVIF 99 (230)
T ss_dssp TCSEEEEETCTTSHHHHHHHTT----TCEEEEEESSHHHHHHHHTTS------SEEEESCTTTC--CCCSCTTCEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHhc----CCeEEEEeCCHHHHHHHHHhC------CcEEEcchhhc--CCCCCCCccCEEEE
Confidence 3789999999999999999884 479999999999999998875 26788888742 24556789999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..+++|+ .+...+++++.++|+|||.+++..++..........................+..+++.+++.++++++||
T Consensus 100 ~~~l~~~--~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf 177 (230)
T 3cc8_A 100 GDVLEHL--FDPWAVIEKVKPYIKQNGVILASIPNVSHISVLAPLLAGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGY 177 (230)
T ss_dssp ESCGGGS--SCHHHHHHHTGGGEEEEEEEEEEEECTTSHHHHHHHHTTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTE
T ss_pred CChhhhc--CCHHHHHHHHHHHcCCCCEEEEEeCCcchHHHHHHHhcCCceeccCCCCCcceEEEecHHHHHHHHHHcCC
Confidence 9999999 56789999999999999999998876544322211100000000000112234467899999999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
+++....
T Consensus 178 ~~~~~~~ 184 (230)
T 3cc8_A 178 SISKVDR 184 (230)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9987654
No 54
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.79 E-value=2e-18 Score=154.68 Aligned_cols=157 Identities=16% Similarity=0.101 Sum_probs=117.0
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.+ + +++||+
T Consensus 71 ~~~~~vLDiGcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~---~~~fD~ 140 (302)
T 3hem_A 71 EPGMTLLDIGCGWGSTMRHAVAEY---DVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE----F---DEPVDR 140 (302)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG----C---CCCCSE
T ss_pred CCcCEEEEeeccCcHHHHHHHHhC---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH----c---CCCccE
Confidence 457899999999999999999964 3689999999999999999876543 479999999874 2 689999
Q ss_pred EEehhhhhcc-------ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccc-----cCceeecCCCeeeec
Q psy11741 184 VLLIFVLDAI-------NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCL-----QDNFYARGDGTLVYF 251 (352)
Q Consensus 184 V~~~~~l~~~-------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 251 (352)
|++..+++|+ +.++...+++++.++|||||++++.++................ ...+.....-+....
T Consensus 141 v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (302)
T 3hem_A 141 IVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKEEAQELGLTSPMSLLRFIKFILTEIFPGGRL 220 (302)
T ss_dssp EEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTCTTCCC
T ss_pred EEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccCccchhhccccccccccchHHHHHHhcCCCCCC
Confidence 9999999999 4467899999999999999999998876554332211100000 000000000011134
Q ss_pred cCHHHHHHHHHhCCCceEEee
Q psy11741 252 FTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 252 ~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
.+.+++..+++++||.++...
T Consensus 221 ~s~~~~~~~l~~aGf~~~~~~ 241 (302)
T 3hem_A 221 PRISQVDYYSSNAGWKVERYH 241 (302)
T ss_dssp CCHHHHHHHHHHHTCEEEEEE
T ss_pred CCHHHHHHHHHhCCcEEEEEE
Confidence 789999999999999988764
No 55
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.79 E-value=8.8e-19 Score=154.17 Aligned_cols=147 Identities=21% Similarity=0.328 Sum_probs=112.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++. ++.+|+|+|+|+.+++.|+++....+ .++.++++|+. .+++++++||+|
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~~~~~~~fD~i 118 (267)
T 3kkz_A 46 EKSLIADIGCGTGGQTMVLAGH---VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMD----DLPFRNEELDLI 118 (267)
T ss_dssp TTCEEEEETCTTCHHHHHHHTT---CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT----SCCCCTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHhc---cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChh----hCCCCCCCEEEE
Confidence 4789999999999999999985 56699999999999999999876543 56999999997 445667899999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..+++|+ ++..+++++.++|||||++++.++.......... .... +.. ....+.+.+++.++++++
T Consensus 119 ~~~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-----~~~~-~~~---~~~~~~~~~~~~~~l~~a 186 (267)
T 3kkz_A 119 WSEGAIYNI---GFERGLNEWRKYLKKGGYLAVSECSWFTDERPAE-----INDF-WMD---AYPEIDTIPNQVAKIHKA 186 (267)
T ss_dssp EESSCGGGT---CHHHHHHHHGGGEEEEEEEEEEEEEESSSCCCHH-----HHHH-HHH---HCTTCEEHHHHHHHHHHT
T ss_pred EEcCCceec---CHHHHHHHHHHHcCCCCEEEEEEeeecCCCChHH-----HHHH-HHH---hCCCCCCHHHHHHHHHHC
Confidence 999999998 4688999999999999999998753211000000 0000 000 001346789999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||.++...
T Consensus 187 Gf~~v~~~ 194 (267)
T 3kkz_A 187 GYLPVATF 194 (267)
T ss_dssp TEEEEEEE
T ss_pred CCEEEEEE
Confidence 99998764
No 56
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.79 E-value=7e-19 Score=157.16 Aligned_cols=161 Identities=18% Similarity=0.274 Sum_probs=112.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC-------ceEEEEecCCCCCC--C--CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD-------RCHAFVCDVTSEDW--N--PPF 176 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-------~v~~~~~d~~~~~~--~--~~~ 176 (352)
+.+|||||||+|..+..++.. .+.+|+|+|+|+.|++.|+++....+. ++.+.+.|+..... . .++
T Consensus 49 ~~~VLDlGCG~G~~l~~~~~~---~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 49 KRKVLAIDFGNGADLEKYFYG---EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp CCEEEETTCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCeEEEEecCCcHhHHHHHhc---CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 689999999999877766653 456899999999999999998754322 26788888854321 1 124
Q ss_pred CCCcceEEEehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhh-----cCc-cccCce---------
Q psy11741 177 APESLDIVLLIFVLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFK-----KGR-CLQDNF--------- 240 (352)
Q Consensus 177 ~~~~fD~V~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-----~~~-~~~~~~--------- 240 (352)
++++||+|+|.+++|++ +.++...++++++++|||||+|++.+++.......... .+. .....+
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 205 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFIIHKNLPSSENYMSVEKIADD 205 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEECCSSSCTTTSEEEECEEETT
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcccccccccccceeeecccccc
Confidence 56899999999999875 44567899999999999999999988764332211000 000 000000
Q ss_pred ----e-ecC--CCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 241 ----Y-ARG--DGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 241 ----~-~~~--~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
+ ..+ .....++...+++..+++++||+++..
T Consensus 206 ~~~~~~~~~~~~~~~e~~v~~~el~~l~~~~Gl~lv~~ 243 (302)
T 2vdw_A 206 RIVVYNPSTMSTPMTEYIIKKNDIVRVFNEYGFVLVDN 243 (302)
T ss_dssp EEEEBCTTTBSSCEEEECCCHHHHHHHHHHTTEEEEEE
T ss_pred ccceeeccccCCCceeeeeEHHHHHHHHHHCCCEEEEe
Confidence 1 111 122335788899999999999999876
No 57
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.79 E-value=2.3e-19 Score=155.85 Aligned_cols=158 Identities=14% Similarity=0.120 Sum_probs=112.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC-CCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA-PESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.. .+|+|+|+|+.|++.|+++.. ..++.++++|+.+.....++. ...||+|+
T Consensus 56 ~~~~vLD~GcG~G~~~~~la~~~----~~v~gvD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~ 129 (245)
T 3ggd_A 56 PELPLIDFACGNGTQTKFLSQFF----PRVIGLDVSKSALEIAAKENT--AANISYRLLDGLVPEQAAQIHSEIGDANIY 129 (245)
T ss_dssp TTSCEEEETCTTSHHHHHHHHHS----SCEEEEESCHHHHHHHHHHSC--CTTEEEEECCTTCHHHHHHHHHHHCSCEEE
T ss_pred CCCeEEEEcCCCCHHHHHHHHhC----CCEEEEECCHHHHHHHHHhCc--ccCceEEECcccccccccccccccCccEEE
Confidence 47899999999999999999854 389999999999999998873 347999999987421100111 12489999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhc---CccccCceeecCCCeeeeccCHHHHHHHHH
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKK---GRCLQDNFYARGDGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 262 (352)
+..+++|+++++...++++++++|||||++++.++.......+.... +............+.....++.+++..++
T Consensus 130 ~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (245)
T 3ggd_A 130 MRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELGTGCIDFFNSLLEKYGQLPYELLLVMEHGIRPGIFTAEDIELYF- 208 (245)
T ss_dssp EESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEECTTHHHHHHHHHHHHSSCCHHHHHHHTTTCCCCCCCHHHHHHHC-
T ss_pred EcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCCccccHHHHHHHhCCCCCchhhhhccccCCCCCccCHHHHHHHh-
Confidence 99999999877999999999999999999998887765432211100 00000000000111122347899999999
Q ss_pred hCCCceEEee
Q psy11741 263 SAGFVEKQNL 272 (352)
Q Consensus 263 ~~Gf~~~~~~ 272 (352)
+||+++...
T Consensus 209 -aGf~~~~~~ 217 (245)
T 3ggd_A 209 -PDFEILSQG 217 (245)
T ss_dssp -TTEEEEEEE
T ss_pred -CCCEEEecc
Confidence 999998764
No 58
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.79 E-value=5e-18 Score=142.35 Aligned_cols=139 Identities=19% Similarity=0.297 Sum_probs=110.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.|+++....+ .++.+..+|+.+ +++ +++||+|++
T Consensus 33 ~~~vLdiG~G~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~----~~~-~~~~D~v~~ 103 (199)
T 2xvm_A 33 PGKTLDLGCGNGRNSLYLAA----NGYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNN----LTF-DRQYDFILS 103 (199)
T ss_dssp SCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGG----CCC-CCCEEEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHH----CCCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhh----CCC-CCCceEEEE
Confidence 67999999999999999998 46699999999999999998876433 479999999874 344 688999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..+++|+++++...+++++.++|+|||.+++.+...... +. ........++.+++.++++. |
T Consensus 104 ~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~---------------~~-~~~~~~~~~~~~~l~~~~~~--f 165 (199)
T 2xvm_A 104 TVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAMDTAD---------------YP-CTVGFPFAFKEGELRRYYEG--W 165 (199)
T ss_dssp ESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSS---------------SC-CCSCCSCCBCTTHHHHHTTT--S
T ss_pred cchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEeeccCC---------------cC-CCCCCCCccCHHHHHHHhcC--C
Confidence 999999977799999999999999999987755322110 00 01122245788999999986 8
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
+++....
T Consensus 166 ~~~~~~~ 172 (199)
T 2xvm_A 166 ERVKYNE 172 (199)
T ss_dssp EEEEEEC
T ss_pred eEEEecc
Confidence 8887643
No 59
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.78 E-value=1.7e-18 Score=151.30 Aligned_cols=143 Identities=21% Similarity=0.365 Sum_probs=111.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.. +. +|+|+|+|+.+++.|+++....+ .++.+.++|+. .+++++++||+|
T Consensus 46 ~~~~vLDiG~G~G~~~~~l~~~~--~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~----~~~~~~~~fD~v 118 (257)
T 3f4k_A 46 DDAKIADIGCGTGGQTLFLADYV--KG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMD----NLPFQNEELDLI 118 (257)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHC--CS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT----SCSSCTTCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHhC--CC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChh----hCCCCCCCEEEE
Confidence 47799999999999999999975 33 99999999999999999876543 45999999996 456668899999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCc---hhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHH
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYD---LVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMF 261 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 261 (352)
++..+++|+ +...+++++.++|||||++++.++.... ..... ..+... ...+.+.+++..++
T Consensus 119 ~~~~~l~~~---~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~--------~~~~~~----~~~~~~~~~~~~~l 183 (257)
T 3f4k_A 119 WSEGAIYNI---GFERGMNEWSKYLKKGGFIAVSEASWFTSERPAEIE--------DFWMDA----YPEISVIPTCIDKM 183 (257)
T ss_dssp EEESCSCCC---CHHHHHHHHHTTEEEEEEEEEEEEEESSSCCCHHHH--------HHHHHH----CTTCCBHHHHHHHH
T ss_pred EecChHhhc---CHHHHHHHHHHHcCCCcEEEEEEeeccCCCChHHHH--------HHHHHh----CCCCCCHHHHHHHH
Confidence 999999998 4678999999999999999998743111 00000 000000 01146899999999
Q ss_pred HhCCCceEEe
Q psy11741 262 ESAGFVEKQN 271 (352)
Q Consensus 262 ~~~Gf~~~~~ 271 (352)
+++||.++..
T Consensus 184 ~~aGf~~v~~ 193 (257)
T 3f4k_A 184 ERAGYTPTAH 193 (257)
T ss_dssp HHTTEEEEEE
T ss_pred HHCCCeEEEE
Confidence 9999999875
No 60
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.78 E-value=3.4e-18 Score=148.08 Aligned_cols=154 Identities=22% Similarity=0.362 Sum_probs=114.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ . .+++|+|+|+.|++.|+++....+.++.+.++|+.+ ++++ ++||+|++.
T Consensus 34 ~~~vLdiG~G~G~~~~~l~~----~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~-~~fD~v~~~ 103 (243)
T 3d2l_A 34 GKRIADIGCGTGTATLLLAD----H-YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRE----LELP-EPVDAITIL 103 (243)
T ss_dssp TCEEEEESCTTCHHHHHHTT----T-SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGG----CCCS-SCEEEEEEC
T ss_pred CCeEEEecCCCCHHHHHHhh----C-CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhh----cCCC-CCcCEEEEe
Confidence 67999999999999998887 4 589999999999999999876655679999999874 3333 789999998
Q ss_pred h-hhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCc----------cccCc--------------ee
Q psy11741 188 F-VLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGR----------CLQDN--------------FY 241 (352)
Q Consensus 188 ~-~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~----------~~~~~--------------~~ 241 (352)
. +++|+ +.++...+++++.++|+|||.+++...++...... .... ..+.. ++
T Consensus 104 ~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (243)
T 3d2l_A 104 CDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVHSPYKMETL--FNGKTYATHAEQSSYIWFADPGEEPLSVVHELTFF 181 (243)
T ss_dssp TTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEECHHHHHTT--TSSEEEEEECSSEEEEEEEEECSSTTEEEEEEEEE
T ss_pred CCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcCCHHHHHHh--cCCcceeEECCCcEEEEEeecCccccEEEEEEEEE
Confidence 6 89988 66788999999999999999999976543221110 0000 00000 00
Q ss_pred ec-CC--------CeeeeccCHHHHHHHHHhCCCceEEeee
Q psy11741 242 AR-GD--------GTLVYFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 242 ~~-~~--------~~~~~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
.. .. ..+..+++.+++.++++++||+++....
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~~~~~~~ 222 (243)
T 3d2l_A 182 IEGEDGRYDRVDETHHQRTYPPEQYITWLREAGFRVCAVTG 222 (243)
T ss_dssp EECTTSCEEEEEEEEEEECCCHHHHHHHHHHTTEEEEEEEE
T ss_pred EEcCCCceEEEEEEEeEecCCHHHHHHHHHHCCCeEEEEec
Confidence 00 11 1233578999999999999999988743
No 61
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.78 E-value=1.2e-18 Score=156.97 Aligned_cols=147 Identities=14% Similarity=0.172 Sum_probs=115.3
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcce
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
..++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+.++|+. .+++++++||
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~----~~~~~~~~fD 187 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF---GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNML----DTPFDKGAVT 187 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTT----SCCCCTTCEE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh----cCCCCCCCEe
Confidence 3457899999999999999999853 5689999999999999999877544 47999999997 4456678999
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchh-----hHhhhcCccccCceeecCCCeeeeccCHHHH
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLV-----QLRFKKGRCLQDNFYARGDGTLVYFFTREEV 257 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (352)
+|++..+++|++ +..+++++.++|||||++++.+....... ....... . ....+++.+++
T Consensus 188 ~V~~~~~l~~~~---~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~s~~~~ 252 (312)
T 3vc1_A 188 ASWNNESTMYVD---LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQPSKWVSQINA-----H-------FECNIHSRREY 252 (312)
T ss_dssp EEEEESCGGGSC---HHHHHHHHHHHEEEEEEEEEEEEEECTTTCSCCHHHHHHHH-----H-------HTCCCCBHHHH
T ss_pred EEEECCchhhCC---HHHHHHHHHHHcCCCcEEEEEEccccccccchhHHHHHHHh-----h-------hcCCCCCHHHH
Confidence 999999999993 88999999999999999999875433211 0000000 0 00125789999
Q ss_pred HHHHHhCCCceEEeee
Q psy11741 258 KTMFESAGFVEKQNLI 273 (352)
Q Consensus 258 ~~ll~~~Gf~~~~~~~ 273 (352)
..+++++||+++....
T Consensus 253 ~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 253 LRAMADNRLVPHTIVD 268 (312)
T ss_dssp HHHHHTTTEEEEEEEE
T ss_pred HHHHHHCCCEEEEEEe
Confidence 9999999999987743
No 62
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.78 E-value=1.3e-18 Score=154.65 Aligned_cols=156 Identities=15% Similarity=0.195 Sum_probs=115.5
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+|||||||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.+ ++ ++||+
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~---~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~----~~---~~fD~ 132 (287)
T 1kpg_A 63 QPGMTLLDVGCGWGATMMRAVEKY---DVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQ----FD---EPVDR 132 (287)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGG----CC---CCCSE
T ss_pred CCcCEEEEECCcccHHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhh----CC---CCeeE
Confidence 357899999999999999999654 4499999999999999999876432 579999999863 32 78999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccc------cCceeecCCCeeeeccCHHHH
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCL------QDNFYARGDGTLVYFFTREEV 257 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~ 257 (352)
|++..+++|++++++..+++++.++|||||.+++.++.......... .+... ...+.....-....+++.+++
T Consensus 133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 211 (287)
T 1kpg_A 133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHE-RGLPMSFTFARFLKFIVTEIFPGGRLPSIPMV 211 (287)
T ss_dssp EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTT-TTCSCHHHHHHHHHHHHHHTSTTCCCCCHHHH
T ss_pred EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCCcccccc-ccccccccccchhhhHHheeCCCCCCCCHHHH
Confidence 99999999998778999999999999999999998876543222100 00000 000000000001134689999
Q ss_pred HHHHHhCCCceEEee
Q psy11741 258 KTMFESAGFVEKQNL 272 (352)
Q Consensus 258 ~~ll~~~Gf~~~~~~ 272 (352)
.++++++||+++...
T Consensus 212 ~~~l~~aGf~~~~~~ 226 (287)
T 1kpg_A 212 QECASANGFTVTRVQ 226 (287)
T ss_dssp HHHHHTTTCEEEEEE
T ss_pred HHHHHhCCcEEEEEE
Confidence 999999999998764
No 63
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.78 E-value=7.1e-19 Score=156.86 Aligned_cols=159 Identities=15% Similarity=0.120 Sum_probs=106.5
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcC--CCCeE--EEEEeCCHHHHHHHHhccccC--CCceEEE--EecCCCCC--CCCC
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCK--NDNVF--VYGCDFSENAVNILKEHEEYK--PDRCHAF--VCDVTSED--WNPP 175 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~~~~--v~gvD~s~~~l~~a~~~~~~~--~~~v~~~--~~d~~~~~--~~~~ 175 (352)
.++.+|||||||+|.++..++..+. .++.. ++|+|+|+.|++.|+++.... ..++.+. .+++.+.. +..+
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 3467999999999987654433221 14554 499999999999999886532 2345544 34432100 0012
Q ss_pred CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCch-hhHhhhcCccccCceeecCCCeeeeccCH
Q psy11741 176 FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDL-VQLRFKKGRCLQDNFYARGDGTLVYFFTR 254 (352)
Q Consensus 176 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (352)
+++++||+|++..++||+ +++..+|++++++|||||++++...+.... ..+.......+ ..+.+..+++.
T Consensus 131 ~~~~~fD~V~~~~~l~~~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 201 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYV--KDIPATLKFFHSLLGTNAKMLIIVVSGSSGWDKLWKKYGSRF-------PQDDLCQYITS 201 (292)
T ss_dssp TCCCCEEEEEEESCGGGC--SCHHHHHHHHHHTEEEEEEEEEEEECTTSHHHHHHHHHGGGS-------CCCTTCCCCCH
T ss_pred cCCCceeEEEEeeeeeec--CCHHHHHHHHHHHcCCCcEEEEEEecCCccHHHHHHHHHHhc-------cCCCcccCCCH
Confidence 457899999999999999 788999999999999999999976554221 11100000000 11123456889
Q ss_pred HHHHHHHHhCCCceEEeee
Q psy11741 255 EEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 255 ~~~~~ll~~~Gf~~~~~~~ 273 (352)
+++.++++++||.++....
T Consensus 202 ~~~~~~l~~aGf~~~~~~~ 220 (292)
T 2aot_A 202 DDLTQMLDNLGLKYECYDL 220 (292)
T ss_dssp HHHHHHHHHHTCCEEEEEE
T ss_pred HHHHHHHHHCCCceEEEEe
Confidence 9999999999999876544
No 64
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.77 E-value=1e-18 Score=160.51 Aligned_cols=159 Identities=15% Similarity=0.190 Sum_probs=117.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|+++....+ .+++++.+|+.+.. +|++ ++||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~p-~~~D~v~ 253 (363)
T 3dp7_A 180 PKRLLDIGGNTGKWATQCVQYN--KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRD--VPFP-TGFDAVW 253 (363)
T ss_dssp CSEEEEESCTTCHHHHHHHHHS--TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSS--CCCC-CCCSEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhC--CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccC--CCCC-CCcCEEE
Confidence 6799999999999999999987 8889999999 999999999876543 57999999997531 1343 7899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..++|++++++...+|++++++|+|||+|++.+...+............................++.+++.++++++|
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~e~~~ll~~AG 333 (363)
T 3dp7_A 254 MSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQRYETASYCLTQISLYFTAMANGNSKMFHSDDLIRCIENAG 333 (363)
T ss_dssp EESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSCSSHHHHHHHHHHHHHHHHSSCSSCCSCCHHHHHHHHHTTT
T ss_pred EechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCccccchhhHHHHhhhhHHhhhCCCCcccCHHHHHHHHHHcC
Confidence 99999999888889999999999999999999876543211100000000000000000111123468999999999999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|+++...
T Consensus 334 f~~v~~~ 340 (363)
T 3dp7_A 334 LEVEEIQ 340 (363)
T ss_dssp EEESCCC
T ss_pred CeEEEEE
Confidence 9998764
No 65
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.77 E-value=7.4e-18 Score=144.36 Aligned_cols=106 Identities=24% Similarity=0.416 Sum_probs=91.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++.+.++|+.+ +++++++||+|++.
T Consensus 39 ~~~vLDlG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~----~~~~~~~~D~v~~~ 110 (227)
T 1ve3_A 39 RGKVLDLACGVGGFSFLLEDY----GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDARK----LSFEDKTFDYVIFI 110 (227)
T ss_dssp CCEEEEETCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTS----CCSCTTCEEEEEEE
T ss_pred CCeEEEEeccCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHhcCCCceEEECchhc----CCCCCCcEEEEEEc
Confidence 679999999999999999884 3499999999999999999876655789999999874 44557899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
.++++....+...++++++++|+|||.+++.+++
T Consensus 111 ~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 111 DSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp SCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 9866555588899999999999999999998765
No 66
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.77 E-value=5.5e-19 Score=157.49 Aligned_cols=156 Identities=15% Similarity=0.310 Sum_probs=111.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-----------------------------
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP----------------------------- 157 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----------------------------- 157 (352)
++.+|||||||+|.++..++..+ ++.+|+|+|+|+.|++.|+++.....
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~--~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKW--GPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHT--CCSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 37899999999999999999987 67799999999999999998865321
Q ss_pred ------------------------------CceEEEEecCCCCCCC-CCCCCCcceEEEehhhhhcc----ChhHHHHHH
Q psy11741 158 ------------------------------DRCHAFVCDVTSEDWN-PPFAPESLDIVLLIFVLDAI----NPNKMQHVI 202 (352)
Q Consensus 158 ------------------------------~~v~~~~~d~~~~~~~-~~~~~~~fD~V~~~~~l~~~----~~~~~~~~l 202 (352)
.++.|.++|+...... +++.+++||+|+|..+++|+ +.+++..++
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l 203 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMF 203 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHH
Confidence 4799999998743200 12357899999999999777 455889999
Q ss_pred HHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh--CCCceEEee
Q psy11741 203 NQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES--AGFVEKQNL 272 (352)
Q Consensus 203 ~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~--~Gf~~~~~~ 272 (352)
++++++|+|||+|++...... . +.....+....+.. .....+.++++..+|.+ +||+.++..
T Consensus 204 ~~~~~~LkpGG~lil~~~~~~---~--y~~~~~~~~~~~~~---~~~~~~~p~~~~~~L~~~~~GF~~~~~~ 267 (292)
T 3g07_A 204 RRIYRHLRPGGILVLEPQPWS---S--YGKRKTLTETIYKN---YYRIQLKPEQFSSYLTSPDVGFSSYELV 267 (292)
T ss_dssp HHHHHHEEEEEEEEEECCCHH---H--HHTTTTSCHHHHHH---HHHCCCCGGGHHHHHTSTTTCCCEEEEC
T ss_pred HHHHHHhCCCcEEEEecCCch---h--hhhhhcccHHHHhh---hhcEEEcHHHHHHHHHhcCCCceEEEEe
Confidence 999999999999999643211 1 11110011000000 00112457889999998 999887764
No 67
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.77 E-value=2.1e-18 Score=141.15 Aligned_cols=129 Identities=22% Similarity=0.320 Sum_probs=105.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.++++ ..++.+..+| . ++++++||+|++.
T Consensus 18 ~~~vLDiG~G~G~~~~~l~~~----~~~v~~vD~s~~~~~~a~~~----~~~v~~~~~d-~------~~~~~~~D~v~~~ 82 (170)
T 3i9f_A 18 KGVIVDYGCGNGFYCKYLLEF----ATKLYCIDINVIALKEVKEK----FDSVITLSDP-K------EIPDNSVDFILFA 82 (170)
T ss_dssp CEEEEEETCTTCTTHHHHHTT----EEEEEEECSCHHHHHHHHHH----CTTSEEESSG-G------GSCTTCEEEEEEE
T ss_pred CCeEEEECCCCCHHHHHHHhh----cCeEEEEeCCHHHHHHHHHh----CCCcEEEeCC-C------CCCCCceEEEEEc
Confidence 779999999999999999985 34999999999999999987 3568899888 2 3457899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|+ .+...+++++.++|+|||.+++.++...... ........++.+++..+++ ||+
T Consensus 83 ~~l~~~--~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~l~--Gf~ 141 (170)
T 3i9f_A 83 NSFHDM--DDKQHVISEVKRILKDDGRVIIIDWRKENTG-----------------IGPPLSIRMDEKDYMGWFS--NFV 141 (170)
T ss_dssp SCSTTC--SCHHHHHHHHHHHEEEEEEEEEEEECSSCCS-----------------SSSCGGGCCCHHHHHHHTT--TEE
T ss_pred cchhcc--cCHHHHHHHHHHhcCCCCEEEEEEcCccccc-----------------cCchHhhhcCHHHHHHHHh--CcE
Confidence 999999 6788999999999999999999876543210 0111223478999999999 999
Q ss_pred eEEee
Q psy11741 268 EKQNL 272 (352)
Q Consensus 268 ~~~~~ 272 (352)
++...
T Consensus 142 ~~~~~ 146 (170)
T 3i9f_A 142 VEKRF 146 (170)
T ss_dssp EEEEE
T ss_pred EEEcc
Confidence 88764
No 68
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.76 E-value=5e-18 Score=153.20 Aligned_cols=156 Identities=17% Similarity=0.187 Sum_probs=116.2
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+|||+|||+|.++..+++.. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.+ + +++||+
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~---~~~fD~ 158 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF---DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED----F---AEPVDR 158 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH---CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG----C---CCCCSE
T ss_pred CCcCEEEEEcccchHHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH----C---CCCcCE
Confidence 457899999999999999999863 5699999999999999999876543 468999999864 2 278999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCcc------ccCceeecCCCeeeeccCHHHH
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRC------LQDNFYARGDGTLVYFFTREEV 257 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 257 (352)
|++..+++|++.+++..+++++.++|||||.+++.++........... +.. ....+.....-....+++.+++
T Consensus 159 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ 237 (318)
T 2fk8_A 159 IVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAAR-GKKLSFETARFIKFIVTEIFPGGRLPSTEMM 237 (318)
T ss_dssp EEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTT-CHHHHHHHHHHHHHHHHHTSTTCCCCCHHHH
T ss_pred EEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhc-cccccccccchhhHHHHhcCCCCcCCCHHHH
Confidence 999999999987889999999999999999999988765543221000 000 0000000000001134689999
Q ss_pred HHHHHhCCCceEEee
Q psy11741 258 KTMFESAGFVEKQNL 272 (352)
Q Consensus 258 ~~ll~~~Gf~~~~~~ 272 (352)
..+++++||+++...
T Consensus 238 ~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 238 VEHGEKAGFTVPEPL 252 (318)
T ss_dssp HHHHHHTTCBCCCCE
T ss_pred HHHHHhCCCEEEEEE
Confidence 999999999988753
No 69
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.76 E-value=5.6e-18 Score=144.15 Aligned_cols=105 Identities=21% Similarity=0.270 Sum_probs=91.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++.... .++.+.++|+.+. + ++++||+|++
T Consensus 51 ~~~~vLDiGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~----~-~~~~fD~v~~ 120 (216)
T 3ofk_A 51 AVSNGLEIGCAAGAFTEKLAP----HCKRLTVIDVMPRAIGRACQRTKRW-SHISWAATDILQF----S-TAELFDLIVV 120 (216)
T ss_dssp SEEEEEEECCTTSHHHHHHGG----GEEEEEEEESCHHHHHHHHHHTTTC-SSEEEEECCTTTC----C-CSCCEEEEEE
T ss_pred CCCcEEEEcCCCCHHHHHHHH----cCCEEEEEECCHHHHHHHHHhcccC-CCeEEEEcchhhC----C-CCCCccEEEE
Confidence 367999999999999999988 4569999999999999999987654 4799999999853 3 4789999999
Q ss_pred hhhhhccC-hhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 187 IFVLDAIN-PNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
..+++|++ ++....+++++.++|||||.+++.+..
T Consensus 121 ~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 121 AEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp ESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred ccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 99999995 466678999999999999999997654
No 70
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.76 E-value=2.7e-18 Score=145.57 Aligned_cols=135 Identities=19% Similarity=0.271 Sum_probs=103.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+ +. +++|+|+|+.|++.|+++. .++.+.++|+. .+++++++||+|+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-------~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~----~~~~~~~~fD~v~ 100 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-------PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGE----ALPFPGESFDVVL 100 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-------CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTT----SCCSCSSCEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-------CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccc----cCCCCCCcEEEEE
Confidence 3789999999999988776 23 8999999999999999886 46889999987 4556678999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++|+ .++..+++++.++|||||.+++.+++................ .....+..+++.+++.++++ |
T Consensus 101 ~~~~l~~~--~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 101 LFTTLEFV--EDVERVLLEARRVLRPGGALVVGVLEALSPWAALYRRLGEKG-----VLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp EESCTTTC--SCHHHHHHHHHHHEEEEEEEEEEEECTTSHHHHHHHHHHHTT-----CTTGGGCCCCCHHHHHHHHC--S
T ss_pred EcChhhhc--CCHHHHHHHHHHHcCCCCEEEEEecCCcCcHHHHHHHHhhcc-----CccccccccCCHHHHHHHhc--C
Confidence 99999999 678899999999999999999998776533211110000000 01112446789999999998 7
No 71
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.75 E-value=1.9e-17 Score=138.14 Aligned_cols=127 Identities=14% Similarity=0.182 Sum_probs=108.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.+++.++++. .++.+.++|+.. +++++++||+|++.
T Consensus 47 ~~~vLdiG~G~G~~~~~l~~----~~~~v~~~D~~~~~~~~a~~~~----~~~~~~~~d~~~----~~~~~~~~D~i~~~ 114 (195)
T 3cgg_A 47 GAKILDAGCGQGRIGGYLSK----QGHDVLGTDLDPILIDYAKQDF----PEARWVVGDLSV----DQISETDFDLIVSA 114 (195)
T ss_dssp TCEEEEETCTTTHHHHHHHH----TTCEEEEEESCHHHHHHHHHHC----TTSEEEECCTTT----SCCCCCCEEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHH----CCCcEEEEcCCHHHHHHHHHhC----CCCcEEEccccc----CCCCCCceeEEEEC
Confidence 78999999999999999988 4669999999999999999876 348899999874 34557899999998
Q ss_pred -hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 188 -FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 188 -~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
.++++++.++...+++.+.++|+|||.+++...... .++.+++..+++++||
T Consensus 115 ~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~~---------------------------~~~~~~~~~~l~~~Gf 167 (195)
T 3cgg_A 115 GNVMGFLAEDGREPALANIHRALGADGRAVIGFGAGR---------------------------GWVFGDFLEVAERVGL 167 (195)
T ss_dssp CCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETTS---------------------------SCCHHHHHHHHHHHTE
T ss_pred CcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCCC---------------------------CcCHHHHHHHHHHcCC
Confidence 688888878889999999999999999999754321 1678899999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.++....
T Consensus 168 ~~~~~~~ 174 (195)
T 3cgg_A 168 ELENAFE 174 (195)
T ss_dssp EEEEEES
T ss_pred EEeeeec
Confidence 9887643
No 72
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.74 E-value=1.3e-17 Score=151.35 Aligned_cols=149 Identities=13% Similarity=0.102 Sum_probs=114.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+..+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.|+++....+ .++++..+|+.+ ..| . +||+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~p--~-~~D~v 239 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAH--EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFD---PLP--A-GAGGY 239 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCC--C-SCSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHHC--CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCC---CCC--C-CCcEE
Confidence 36799999999999999999987 7889999999 999999998876533 679999999873 222 3 79999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++.+++|+++.++...+|++++++|+|||++++.+...+.. .. ........... .....++.+++..+++++
T Consensus 240 ~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~-~~----~~~~d~~~~~~---~~~~~~t~~e~~~ll~~a 311 (332)
T 3i53_A 240 VLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE-HA----GTGMDLRMLTY---FGGKERSLAELGELAAQA 311 (332)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC----C----CHHHHHHHHHH---HSCCCCCHHHHHHHHHHT
T ss_pred EEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC-Cc----cHHHHHHHHhh---CCCCCCCHHHHHHHHHHC
Confidence 99999999977778999999999999999999988654432 00 00000000000 011247899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||++++..
T Consensus 312 Gf~~~~~~ 319 (332)
T 3i53_A 312 GLAVRAAH 319 (332)
T ss_dssp TEEEEEEE
T ss_pred CCEEEEEE
Confidence 99998764
No 73
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.74 E-value=6.5e-18 Score=149.18 Aligned_cols=162 Identities=15% Similarity=0.160 Sum_probs=114.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHH------HHHHHHhccccCC--CceEEEEec-CCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSEN------AVNILKEHEEYKP--DRCHAFVCD-VTSEDWNPPFA 177 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~------~l~~a~~~~~~~~--~~v~~~~~d-~~~~~~~~~~~ 177 (352)
++.+|||||||+|.++..+++..+ +..+|+|+|+|+. +++.|+++....+ .++.+..+| +... .++++
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~g-~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~ 119 (275)
T 3bkx_A 43 PGEKILEIGCGQGDLSAVLADQVG-SSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDD--LGPIA 119 (275)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHC-TTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTC--CGGGT
T ss_pred CCCEEEEeCCCCCHHHHHHHHHhC-CCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhc--cCCCC
Confidence 378999999999999999998753 4479999999997 9999998876543 579999998 4321 45566
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhH---hhh--cCccccCceeecCCCeeeecc
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQL---RFK--KGRCLQDNFYARGDGTLVYFF 252 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~ 252 (352)
+++||+|++..+++|+ .+...+++.+.++++|||.+++.++........ ... ...................++
T Consensus 120 ~~~fD~v~~~~~l~~~--~~~~~~~~~~~~l~~~gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (275)
T 3bkx_A 120 DQHFDRVVLAHSLWYF--ASANALALLFKNMAAVCDHVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLI 197 (275)
T ss_dssp TCCCSEEEEESCGGGS--SCHHHHHHHHHHHTTTCSEEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCC
T ss_pred CCCEEEEEEccchhhC--CCHHHHHHHHHHHhCCCCEEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccC
Confidence 7899999999999999 444567777778888899999988665321100 000 000000000011122333568
Q ss_pred CHHHHHHHHHhCCCceEEeee
Q psy11741 253 TREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 253 ~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
+.+++.++++++||+++....
T Consensus 198 s~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 198 TPDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp CHHHHHHHHHHHTCEEEECCC
T ss_pred CHHHHHHHHHHCCCeeEEEEE
Confidence 999999999999999987643
No 74
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.73 E-value=1.7e-17 Score=144.05 Aligned_cols=139 Identities=12% Similarity=0.002 Sum_probs=99.5
Q ss_pred HHHHhhHHhhhhHHHHhhhcccccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEE
Q psy11741 57 LIQTLNEDVAKNWDAFYNVHQNRFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFV 136 (352)
Q Consensus 57 ~~~~~~~~~~~yw~~~y~~~~~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v 136 (352)
..+.|+..+..||+..+..+ ...+....+..+ + ..++.+|||||||+|.++..+++ .+.+|
T Consensus 10 ~a~~wd~~a~~f~~~~~~~~------~~~~~~~il~~l-~--------l~~g~~VLDlGcGtG~~a~~La~----~g~~V 70 (261)
T 3iv6_A 10 KAEAWELIGNQFWTIGRVAA------RPSDRENDIFLE-N--------IVPGSTVAVIGASTRFLIEKALE----RGASV 70 (261)
T ss_dssp THHHHHTTTTHHHHTSCGGG------SCCHHHHHHHTT-T--------CCTTCEEEEECTTCHHHHHHHHH----TTCEE
T ss_pred hhhHHHHHHHHHHHHhhccc------cHHHHHHHHHhc-C--------CCCcCEEEEEeCcchHHHHHHHh----cCCEE
Confidence 45667777777877544321 012322332222 1 23478999999999999999998 66799
Q ss_pred EEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-CCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEE
Q psy11741 137 YGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-PFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMV 215 (352)
Q Consensus 137 ~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l 215 (352)
+|+|+|+.|++.|+++.... ++..++.+..... ...+++||+|++..+++|+..++...+++++.++| |||.+
T Consensus 71 ~gvD~S~~ml~~Ar~~~~~~-----~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l 144 (261)
T 3iv6_A 71 TVFDFSQRMCDDLAEALADR-----CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTV 144 (261)
T ss_dssp EEEESCHHHHHHHHHHTSSS-----CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEE
T ss_pred EEEECCHHHHHHHHHHHHhc-----cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEE
Confidence 99999999999999987543 2233333211100 11257899999999999998888999999999999 99999
Q ss_pred EEEeC
Q psy11741 216 LFRDY 220 (352)
Q Consensus 216 ~~~~~ 220 (352)
+++..
T Consensus 145 ~lS~~ 149 (261)
T 3iv6_A 145 RASVK 149 (261)
T ss_dssp EEEEE
T ss_pred EEEec
Confidence 99754
No 75
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.73 E-value=1.8e-17 Score=147.31 Aligned_cols=138 Identities=18% Similarity=0.268 Sum_probs=110.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|+++....+.++.+.++|+.+. +. +++||+|++.
T Consensus 121 ~~~vLD~GcG~G~~~~~l~~----~g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~----~~-~~~fD~i~~~ 191 (286)
T 3m70_A 121 PCKVLDLGCGQGRNSLYLSL----LGYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAA----NI-QENYDFIVST 191 (286)
T ss_dssp SCEEEEESCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGC----CC-CSCEEEEEEC
T ss_pred CCcEEEECCCCCHHHHHHHH----CCCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccc----cc-cCCccEEEEc
Confidence 78999999999999999998 567999999999999999998876656899999999853 33 6899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.+++|+++++...+++++.++|+|||.+++........ +. ........++.+++..++.. |.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~---------------~~-~~~~~~~~~~~~~l~~~~~~--~~ 253 (286)
T 3m70_A 192 VVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMSTDD---------------VP-CPLPFSFTFAENELKEYYKD--WE 253 (286)
T ss_dssp SSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBCCSS---------------SC-CSSCCSCCBCTTHHHHHTTT--SE
T ss_pred cchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecCCCC---------------CC-CCCCccccCCHHHHHHHhcC--CE
Confidence 99999988889999999999999999977754322110 00 01122345778889998865 87
Q ss_pred eEEee
Q psy11741 268 EKQNL 272 (352)
Q Consensus 268 ~~~~~ 272 (352)
++...
T Consensus 254 ~~~~~ 258 (286)
T 3m70_A 254 FLEYN 258 (286)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77664
No 76
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.73 E-value=6.6e-18 Score=147.97 Aligned_cols=148 Identities=18% Similarity=0.274 Sum_probs=104.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+++|+|+|+.|++.|+++.. . .+.++|+. .+++++++||+|++.
T Consensus 55 ~~~vLDiGcG~G~~~~~l~~----~~~~v~gvD~s~~~l~~a~~~~~---~--~~~~~d~~----~~~~~~~~fD~v~~~ 121 (260)
T 2avn_A 55 PCRVLDLGGGTGKWSLFLQE----RGFEVVLVDPSKEMLEVAREKGV---K--NVVEAKAE----DLPFPSGAFEAVLAL 121 (260)
T ss_dssp CCEEEEETCTTCHHHHHHHT----TTCEEEEEESCHHHHHHHHHHTC---S--CEEECCTT----SCCSCTTCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHH----cCCeEEEEeCCHHHHHHHHhhcC---C--CEEECcHH----HCCCCCCCEEEEEEc
Confidence 78999999999999999988 56799999999999999998864 1 27888887 445667899999998
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCcc------ccCceeecCC---CeeeeccCHHHHH
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRC------LQDNFYARGD---GTLVYFFTREEVK 258 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~~~~~~~~~~~ 258 (352)
.++.|+. .++..+++++.++|+|||.+++..++.............. +......... .....+++.+++.
T Consensus 122 ~~~~~~~-~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 200 (260)
T 2avn_A 122 GDVLSYV-ENKDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKDAWDQITRFLKTQTTSVGTTLFSFNSYAFKPEDLD 200 (260)
T ss_dssp SSHHHHC-SCHHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTTCHHHHHHHHHHCEEEEECSSEEEEEECBCGGGGS
T ss_pred chhhhcc-ccHHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcchhHHHHHHHHhccccccCCCceeEEEeccCHHHHH
Confidence 8666553 3489999999999999999999876643111000000000 0000000000 0112367888888
Q ss_pred HHHHhCCCceEEee
Q psy11741 259 TMFESAGFVEKQNL 272 (352)
Q Consensus 259 ~ll~~~Gf~~~~~~ 272 (352)
.+ +||+++...
T Consensus 201 ~l---aGf~~~~~~ 211 (260)
T 2avn_A 201 SL---EGFETVDIR 211 (260)
T ss_dssp SC---TTEEEEEEE
T ss_pred Hh---cCceEEEEE
Confidence 87 999988764
No 77
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.73 E-value=9.4e-18 Score=150.08 Aligned_cols=105 Identities=15% Similarity=0.297 Sum_probs=91.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC---CCceEEEEecCCCCCCCCCCCC------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK---PDRCHAFVCDVTSEDWNPPFAP------ 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~---~~~v~~~~~d~~~~~~~~~~~~------ 178 (352)
+.+|||||||+|..+..+++.+. ++.+|+|+|+|+.|++.|+++.... ..++.++++|+.+ +++++
T Consensus 37 ~~~vLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~~~~~ 111 (299)
T 3g5t_A 37 RKLLVDVGCGPGTATLQMAQELK-PFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDD----FKFLGADSVDK 111 (299)
T ss_dssp CSEEEEETCTTTHHHHHHHHHSS-CCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTC----CGGGCTTTTTS
T ss_pred CCEEEEECCCCCHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHh----CCccccccccC
Confidence 78999999999999999996432 6789999999999999999987654 5789999999984 34444
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++||+|++..++||+ ++..+++++.++|+|||.|++.++
T Consensus 112 ~~fD~V~~~~~l~~~---~~~~~l~~~~~~LkpgG~l~i~~~ 150 (299)
T 3g5t_A 112 QKIDMITAVECAHWF---DFEKFQRSAYANLRKDGTIAIWGY 150 (299)
T ss_dssp SCEEEEEEESCGGGS---CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCeeEEeHhhHHHHh---CHHHHHHHHHHhcCCCcEEEEEec
Confidence 799999999999999 788999999999999999998544
No 78
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.72 E-value=2.3e-16 Score=142.01 Aligned_cols=112 Identities=17% Similarity=0.213 Sum_probs=92.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc--------CCCceEEEEecCCCCCCCCCC--C
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY--------KPDRCHAFVCDVTSEDWNPPF--A 177 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~--------~~~~v~~~~~d~~~~~~~~~~--~ 177 (352)
+.+|||+|||+|.++..+++. ++.+++|+|+|+.|++.|+++... ...++.+.++|+.......++ +
T Consensus 35 ~~~VLDlGcG~G~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 111 (313)
T 3bgv_A 35 DITVLDLGCGKGGDLLKWKKG---RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDP 111 (313)
T ss_dssp CCEEEEETCTTTTTHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSST
T ss_pred CCEEEEECCCCcHHHHHHHhc---CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccC
Confidence 679999999999999999873 567999999999999999987653 224789999999864311123 3
Q ss_pred CCcceEEEehhhhhcc--ChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 178 PESLDIVLLIFVLDAI--NPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
+++||+|++..++|++ +.++...++++++++|+|||.+++.+++.
T Consensus 112 ~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred CCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCCh
Confidence 4589999999999987 55778899999999999999999987654
No 79
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.71 E-value=7.5e-17 Score=137.02 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=101.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|++++...+ .++.++++|+... ...+++++||+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 42 NPIHVEVGSGKGAFVSGMAKQN--PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDL--TDYFEDGEIDRLYL 117 (214)
T ss_dssp CCEEEEESCTTSHHHHHHHHHC--TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCG--GGTSCTTCCSEEEE
T ss_pred CCeEEEEccCcCHHHHHHHHHC--CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHH--HhhcCCCCCCEEEE
Confidence 6799999999999999999976 77899999999999999999876533 5899999999742 11145778999999
Q ss_pred hhhhhccChh------HHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHH
Q psy11741 187 IFVLDAINPN------KMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTM 260 (352)
Q Consensus 187 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (352)
.....+.... ....+++.+.++|+|||.+++.+... ...+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~ 168 (214)
T 1yzh_A 118 NFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDNR-----------------------------GLFEYSLVS 168 (214)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESCH-----------------------------HHHHHHHHH
T ss_pred ECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCCH-----------------------------HHHHHHHHH
Confidence 8654332100 23679999999999999999964321 012456778
Q ss_pred HHhCCCceEEeee
Q psy11741 261 FESAGFVEKQNLI 273 (352)
Q Consensus 261 l~~~Gf~~~~~~~ 273 (352)
++++||..+....
T Consensus 169 ~~~~g~~~~~~~~ 181 (214)
T 1yzh_A 169 FSQYGMKLNGVWL 181 (214)
T ss_dssp HHHHTCEEEEEES
T ss_pred HHHCCCeeeeccc
Confidence 8889998876543
No 80
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.71 E-value=4.6e-17 Score=149.83 Aligned_cols=151 Identities=14% Similarity=0.144 Sum_probs=115.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|+++.... ..++++..+|+.. .. +. .||+|
T Consensus 202 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~---~~--p~-~~D~v 272 (369)
T 3gwz_A 202 GAATAVDIGGGRGSLMAAVLDAF--PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFE---TI--PD-GADVY 272 (369)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTT---CC--CS-SCSEE
T ss_pred cCcEEEEeCCCccHHHHHHHHHC--CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCC---CC--CC-CceEE
Confidence 46899999999999999999987 7889999999 99999999887653 3679999999873 22 23 79999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..++|++++++...+|++++++|+|||++++.+...+...... ............ ....++.+++..+++++
T Consensus 273 ~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~---~~~~d~~~~~~~---~g~~~t~~e~~~ll~~a 346 (369)
T 3gwz_A 273 LIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDERPAAS---TLFVDLLLLVLV---GGAERSESEFAALLEKS 346 (369)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCSSCCHH---HHHHHHHHHHHH---SCCCBCHHHHHHHHHTT
T ss_pred EhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCc---hhHhhHHHHhhc---CCccCCHHHHHHHHHHC
Confidence 999999999777778999999999999999999876443311100 000000000000 11247899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||+++...
T Consensus 347 Gf~~~~~~ 354 (369)
T 3gwz_A 347 GLRVERSL 354 (369)
T ss_dssp TEEEEEEE
T ss_pred CCeEEEEE
Confidence 99998874
No 81
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.71 E-value=3.8e-17 Score=148.44 Aligned_cols=155 Identities=19% Similarity=0.256 Sum_probs=115.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.+ ++.+++|+|+| .+++.|+++.... ..++++..+|+.+. +++. .||+|
T Consensus 165 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~-~~D~v 236 (335)
T 2r3s_A 165 EPLKVLDISASHGLFGIAVAQHN--PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV----DYGN-DYDLV 236 (335)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC--TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS----CCCS-CEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHC--CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC----CCCC-CCcEE
Confidence 37899999999999999999987 77899999999 9999999886543 24699999998742 3333 49999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++.+++|+++.++...++++++++|+|||++++.+...+........ ............ .....++.+++.++++++
T Consensus 237 ~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~t~~~~~~ll~~a 313 (335)
T 2r3s_A 237 LLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNSDRITPPD-AAAFSLVMLATT--PNGDAYTFAEYESMFSNA 313 (335)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCTTSSCSHH-HHHHHHHHHHHS--SSCCCCCHHHHHHHHHHT
T ss_pred EEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCCCcCCchH-HHHHHHHHHeeC--CCCCcCCHHHHHHHHHHC
Confidence 99999999987888999999999999999999988654421100000 000000000000 012347899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||..+...
T Consensus 314 Gf~~~~~~ 321 (335)
T 2r3s_A 314 GFSHSQLH 321 (335)
T ss_dssp TCSEEEEE
T ss_pred CCCeeeEE
Confidence 99988763
No 82
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.71 E-value=5.2e-18 Score=158.81 Aligned_cols=146 Identities=20% Similarity=0.188 Sum_probs=106.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++ .+.+++|+|+|+.|++.|+++.... ....+...+.. .+++++++||+|++
T Consensus 107 ~~~~VLDiGcG~G~~~~~l~~----~g~~v~gvD~s~~~~~~a~~~~~~~-~~~~~~~~~~~----~l~~~~~~fD~I~~ 177 (416)
T 4e2x_A 107 PDPFIVEIGCNDGIMLRTIQE----AGVRHLGFEPSSGVAAKAREKGIRV-RTDFFEKATAD----DVRRTEGPANVIYA 177 (416)
T ss_dssp SSCEEEEETCTTTTTHHHHHH----TTCEEEEECCCHHHHHHHHTTTCCE-ECSCCSHHHHH----HHHHHHCCEEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHH----cCCcEEEECCCHHHHHHHHHcCCCc-ceeeechhhHh----hcccCCCCEEEEEE
Confidence 478999999999999999998 5669999999999999998872110 00011122222 23345689999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..+++|+ .++..++++++++|||||++++..++....... .. +......+..+++.+++..+++++||
T Consensus 178 ~~vl~h~--~d~~~~l~~~~r~LkpgG~l~i~~~~~~~~~~~----~~------~~~~~~~~~~~~s~~~l~~ll~~aGf 245 (416)
T 4e2x_A 178 ANTLCHI--PYVQSVLEGVDALLAPDGVFVFEDPYLGDIVAK----TS------FDQIFDEHFFLFSATSVQGMAQRCGF 245 (416)
T ss_dssp ESCGGGC--TTHHHHHHHHHHHEEEEEEEEEEEECHHHHHHH----TC------GGGCSTTCCEECCHHHHHHHHHHTTE
T ss_pred CChHHhc--CCHHHHHHHHHHHcCCCeEEEEEeCChHHhhhh----cc------hhhhhhhhhhcCCHHHHHHHHHHcCC
Confidence 9999999 689999999999999999999986553221110 00 01111234456899999999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.+++...
T Consensus 246 ~~~~~~~ 252 (416)
T 4e2x_A 246 ELVDVQR 252 (416)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9987754
No 83
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.71 E-value=2.8e-17 Score=150.43 Aligned_cols=154 Identities=13% Similarity=0.178 Sum_probs=114.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|+++....+ .++++..+|+.+.. ++.++.||+|+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~~D~v~ 253 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRH--PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDAR---NFEGGAADVVM 253 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHC--TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGG---GGTTCCEEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHhC--CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCc---ccCCCCccEEE
Confidence 6799999999999999999987 7889999999 889999998866533 46999999987521 11346799999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhh-HhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQ-LRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
+..++|++++++...++++++++|+|||++++.+...+.... .... ............ ....++.+++..+++++
T Consensus 254 ~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~t~~e~~~ll~~a 329 (352)
T 3mcz_A 254 LNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDDRVTPALS--ADFSLHMMVNTN--HGELHPTPWIAGVVRDA 329 (352)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTTSSSSHHH--HHHHHHHHHHST--TCCCCCHHHHHHHHHHT
T ss_pred EecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCCchH--HHhhHHHHhhCC--CCCcCCHHHHHHHHHHC
Confidence 999999998778899999999999999999998764332110 0000 000000000000 11237899999999999
Q ss_pred CCceEEe
Q psy11741 265 GFVEKQN 271 (352)
Q Consensus 265 Gf~~~~~ 271 (352)
||++++.
T Consensus 330 Gf~~~~~ 336 (352)
T 3mcz_A 330 GLAVGER 336 (352)
T ss_dssp TCEEEEE
T ss_pred CCceeee
Confidence 9999874
No 84
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.70 E-value=2.8e-16 Score=135.94 Aligned_cols=182 Identities=13% Similarity=0.121 Sum_probs=119.5
Q ss_pred ccCCCHHHHHHhhHHhhhh--HHHHhhhccccccc-chhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHH
Q psy11741 50 VLQIDKNLIQTLNEDVAKN--WDAFYNVHQNRFFK-DRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIV 126 (352)
Q Consensus 50 ~~~~~~~~~~~~~~~~~~y--w~~~y~~~~~~f~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~ 126 (352)
..++++...+.+......+ |+..+.... ... ...|....+..+..... ....++.+|||+|||+|..+..++
T Consensus 15 ~~~l~~~~~~~~~~~~~~l~~~~~~~~l~~--~~~~~~~~~~~~~d~l~~~~~---~~~~~~~~vLDiG~G~G~~~~~la 89 (240)
T 1xdz_A 15 GISLSPRQLEQFELYYDMLVEWNEKINLTS--ITEKKEVYLKHFYDSITAAFY---VDFNQVNTICDVGAGAGFPSLPIK 89 (240)
T ss_dssp TCCCCHHHHHHHHHHHHHHHHHHHHSCCCS--CCSHHHHHHHTHHHHHGGGGT---SCGGGCCEEEEECSSSCTTHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhHhcCccc--cCCHHHHHHHHHHHHHhHHHh---cccCCCCEEEEecCCCCHHHHHHH
Confidence 4566777777777666655 555432211 111 11222222222211100 001137899999999999999999
Q ss_pred hhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEehhhhhccChhHHHHHHHHH
Q psy11741 127 EHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLDAINPNKMQHVINQV 205 (352)
Q Consensus 127 ~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~ 205 (352)
... ++.+|+|+|+|+.|++.|+++....+ .+++++++|+.+.... +..+++||+|++.. + .++..+++.+
T Consensus 90 ~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~fD~V~~~~----~--~~~~~~l~~~ 160 (240)
T 1xdz_A 90 ICF--PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQR-KDVRESYDIVTARA----V--ARLSVLSELC 160 (240)
T ss_dssp HHC--TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTC-TTTTTCEEEEEEEC----C--SCHHHHHHHH
T ss_pred HhC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhccc-ccccCCccEEEEec----c--CCHHHHHHHH
Confidence 754 77899999999999999999876533 4699999998642110 11157899999865 2 4678999999
Q ss_pred HHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEee
Q psy11741 206 YKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 206 ~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
.++|+|||.+++....... ....++...++..||.+....
T Consensus 161 ~~~LkpgG~l~~~~g~~~~---------------------------~~~~~~~~~l~~~g~~~~~~~ 200 (240)
T 1xdz_A 161 LPLVKKNGLFVALKAASAE---------------------------EELNAGKKAITTLGGELENIH 200 (240)
T ss_dssp GGGEEEEEEEEEEECC-CH---------------------------HHHHHHHHHHHHTTEEEEEEE
T ss_pred HHhcCCCCEEEEEeCCCch---------------------------HHHHHHHHHHHHcCCeEeEEE
Confidence 9999999999886321100 113457778899999887653
No 85
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.70 E-value=1.1e-16 Score=140.25 Aligned_cols=139 Identities=12% Similarity=0.244 Sum_probs=101.7
Q ss_pred hHHHHhh---hcccccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccc----cHHHHHhhcCC-C-CeEEEE
Q psy11741 68 NWDAFYN---VHQNRFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGN----SVFPIVEHCKN-D-NVFVYG 138 (352)
Q Consensus 68 yw~~~y~---~~~~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~----~~~~l~~~~~~-~-~~~v~g 138 (352)
-|..+.. .+.+.|+.+...+...-..++|.. ++.+|||+|||||. ++..+++.++. + +.+|+|
T Consensus 71 e~~~l~~~lt~~~t~FfRd~~~f~~l~~~llp~~--------~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~a 142 (274)
T 1af7_A 71 EWQAFINALTTNLTAFFREAHHFPILAEHARRRH--------GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFA 142 (274)
T ss_dssp HHHHHHHHHCCCCCCTTTTTTHHHHHHHHHHHSC--------SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEE
T ss_pred HHHHHHHHHhhcCccccCChHHHHHHHHHccCCC--------CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEE
Confidence 3554442 344567776555444334455541 25799999999998 55556665321 1 579999
Q ss_pred EeCCHHHHHHHHhcccc-----------------------CC---------CceEEEEecCCCCCCCCCCC-CCcceEEE
Q psy11741 139 CDFSENAVNILKEHEEY-----------------------KP---------DRCHAFVCDVTSEDWNPPFA-PESLDIVL 185 (352)
Q Consensus 139 vD~s~~~l~~a~~~~~~-----------------------~~---------~~v~~~~~d~~~~~~~~~~~-~~~fD~V~ 185 (352)
+|+|+.|++.|+++.-. .+ .+|.|.++|+.+. +++ .++||+|+
T Consensus 143 tDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~----~~~~~~~fDlI~ 218 (274)
T 1af7_A 143 SDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEK----QYNVPGPFDAIF 218 (274)
T ss_dssp EESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCS----SCCCCCCEEEEE
T ss_pred EECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCC----CCCcCCCeeEEE
Confidence 99999999999987410 00 3689999999752 232 57899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|.++++|++++...+++++++++|+|||+|++.
T Consensus 219 crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 219 CRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp ECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 999999998888899999999999999999984
No 86
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.70 E-value=9.2e-17 Score=147.38 Aligned_cols=153 Identities=19% Similarity=0.330 Sum_probs=114.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|+++.... ..++++..+|+.+. ++++ +|+|
T Consensus 190 ~~~~vLDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~----~~~~--~D~v 260 (359)
T 1x19_A 190 GVKKMIDVGGGIGDISAAMLKHF--PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE----SYPE--ADAV 260 (359)
T ss_dssp TCCEEEEESCTTCHHHHHHHHHC--TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS----CCCC--CSEE
T ss_pred CCCEEEEECCcccHHHHHHHHHC--CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC----CCCC--CCEE
Confidence 47899999999999999999987 7889999999 99999999887653 24699999999742 3333 3999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceee-cC-CCeeeeccCHHHHHHHHH
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYA-RG-DGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~ll~ 262 (352)
++..++|++++++...+|++++++|+|||++++.+...+........ ... .... .. ......+++.+++.++++
T Consensus 261 ~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~--~~~--~~~~~~~~g~~~~~~~t~~e~~~ll~ 336 (359)
T 1x19_A 261 LFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVIDDPENPNFD--YLS--HYILGAGMPFSVLGFKEQARYKEILE 336 (359)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCCCTTSCCHH--HHH--HHGGGGGSSCCCCCCCCGGGHHHHHH
T ss_pred EEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccCCCCCchHH--HHH--HHHHhcCCCCcccCCCCHHHHHHHHH
Confidence 99999999977779999999999999999998877554321000000 000 0000 11 111224588999999999
Q ss_pred hCCCceEEee
Q psy11741 263 SAGFVEKQNL 272 (352)
Q Consensus 263 ~~Gf~~~~~~ 272 (352)
++||+++...
T Consensus 337 ~aGf~~v~~~ 346 (359)
T 1x19_A 337 SLGYKDVTMV 346 (359)
T ss_dssp HHTCEEEEEE
T ss_pred HCCCceEEEE
Confidence 9999988764
No 87
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.70 E-value=2e-16 Score=135.82 Aligned_cols=132 Identities=14% Similarity=0.096 Sum_probs=102.1
Q ss_pred CCCeEEEEcCC-ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCG-VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG-~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+||| +|.++..+++.. +.+|+|+|+|+.+++.|++++...+.++.++++|+... .++++++||+|+
T Consensus 55 ~~~~vLDlG~G~~G~~~~~la~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~---~~~~~~~fD~I~ 128 (230)
T 3evz_A 55 GGEVALEIGTGHTAMMALMAEKFF---NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGII---KGVVEGTFDVIF 128 (230)
T ss_dssp SSCEEEEECCTTTCHHHHHHHHHH---CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSS---TTTCCSCEEEEE
T ss_pred CCCEEEEcCCCHHHHHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhh---hhcccCceeEEE
Confidence 37899999999 999999999853 56999999999999999999877656899999997532 234468999999
Q ss_pred ehhhhhccC-----------------hhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCee
Q psy11741 186 LIFVLDAIN-----------------PNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTL 248 (352)
Q Consensus 186 ~~~~l~~~~-----------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
++-.+++.+ .+....+++.+.++|||||++++......
T Consensus 129 ~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~------------------------- 183 (230)
T 3evz_A 129 SAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPDKE------------------------- 183 (230)
T ss_dssp ECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEESCH-------------------------
T ss_pred ECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecccH-------------------------
Confidence 875544321 12357899999999999999998643210
Q ss_pred eeccCHHHHHHHHHhCCCceEEee
Q psy11741 249 VYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 249 ~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
...+++..++++.||.+....
T Consensus 184 ---~~~~~~~~~l~~~g~~~~~~~ 204 (230)
T 3evz_A 184 ---KLLNVIKERGIKLGYSVKDIK 204 (230)
T ss_dssp ---HHHHHHHHHHHHTTCEEEEEE
T ss_pred ---hHHHHHHHHHHHcCCceEEEE
Confidence 235678889999999776653
No 88
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.70 E-value=4.7e-17 Score=149.63 Aligned_cols=150 Identities=13% Similarity=0.118 Sum_probs=109.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|++. .+++++.+|+.+ +++.+ |+|++
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p~~--D~v~~ 267 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKY--PSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-----GVPKG--DAIFI 267 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhC--CCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-----CCCCC--CEEEE
Confidence 46899999999999999999987 8889999999 8888877643 579999999874 23333 99999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhH--hhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQL--RFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
..++|++++++...+|++++++|+|||+|++.+...+..... ................ .....++.+++.++++++
T Consensus 268 ~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~--~~g~~rt~~e~~~ll~~A 345 (368)
T 3reo_A 268 KWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYN--PGGKERTEKEFQALAMAS 345 (368)
T ss_dssp ESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSSCCCCHHHHHHHHHHHHHHHHS--SBCCCCCHHHHHHHHHHT
T ss_pred echhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCCchhhhHHHhhhHHHHhhc--CCCccCCHHHHHHHHHHC
Confidence 999999988888899999999999999999988654321100 0000000000000000 011236899999999999
Q ss_pred CCceEEeee
Q psy11741 265 GFVEKQNLI 273 (352)
Q Consensus 265 Gf~~~~~~~ 273 (352)
||+.+++..
T Consensus 346 GF~~v~~~~ 354 (368)
T 3reo_A 346 GFRGFKVAS 354 (368)
T ss_dssp TCCEEEEEE
T ss_pred CCeeeEEEE
Confidence 999988643
No 89
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.69 E-value=1.2e-16 Score=140.74 Aligned_cols=151 Identities=15% Similarity=0.164 Sum_probs=109.3
Q ss_pred CCeEEEEcCCc---cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC-------CCCC
Q psy11741 108 TKNILEIGCGV---GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN-------PPFA 177 (352)
Q Consensus 108 ~~~vLD~GcG~---G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-------~~~~ 177 (352)
..+|||||||+ |.++..+.+.. ++.+|+|+|+|+.|++.|+++... ..++.++++|+.+..+. -.++
T Consensus 78 ~~~vLDlGcG~pt~G~~~~~~~~~~--p~~~v~~vD~sp~~l~~Ar~~~~~-~~~v~~~~~D~~~~~~~~~~~~~~~~~d 154 (274)
T 2qe6_A 78 ISQFLDLGSGLPTVQNTHEVAQSVN--PDARVVYVDIDPMVLTHGRALLAK-DPNTAVFTADVRDPEYILNHPDVRRMID 154 (274)
T ss_dssp CCEEEEETCCSCCSSCHHHHHHHHC--TTCEEEEEESSHHHHHHHHHHHTT-CTTEEEEECCTTCHHHHHHSHHHHHHCC
T ss_pred CCEEEEECCCCCCCChHHHHHHHhC--CCCEEEEEECChHHHHHHHHhcCC-CCCeEEEEeeCCCchhhhccchhhccCC
Confidence 47999999999 98876666554 778999999999999999998743 35799999999752100 0122
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHH
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEV 257 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (352)
..+||+|++..++||++.++...++++++++|+|||+|++.+........... +. ..+... +....+++.+++
T Consensus 155 ~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~~~~~~~~~-----~~-~~~~~~-~~~~~~~s~~ei 227 (274)
T 2qe6_A 155 FSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVDTGLPAQQK-----LA-RITREN-LGEGWARTPEEI 227 (274)
T ss_dssp TTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBCSSCHHHHH-----HH-HHHHHH-HSCCCCBCHHHH
T ss_pred CCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecCcchHHHHH-----HH-HHHHhc-CCCCccCCHHHH
Confidence 35899999999999997667999999999999999999998876532011000 00 001100 012245799999
Q ss_pred HHHHHhCCCceEE
Q psy11741 258 KTMFESAGFVEKQ 270 (352)
Q Consensus 258 ~~ll~~~Gf~~~~ 270 (352)
..+| .||++++
T Consensus 228 ~~~l--~G~~l~~ 238 (274)
T 2qe6_A 228 ERQF--GDFELVE 238 (274)
T ss_dssp HHTT--TTCEECT
T ss_pred HHHh--CCCeEcc
Confidence 9999 5998765
No 90
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.69 E-value=1.5e-16 Score=146.70 Aligned_cols=153 Identities=21% Similarity=0.214 Sum_probs=112.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|+++....+ .++++..+|+.+ .++ . .||+|
T Consensus 182 ~~~~vlDvG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~--~-~~D~v 252 (374)
T 1qzz_A 182 AVRHVLDVGGGNGGMLAAIALRA--PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFK---PLP--V-TADVV 252 (374)
T ss_dssp TCCEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS---CCS--C-CEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHC--CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC---cCC--C-CCCEE
Confidence 47899999999999999999987 7889999999 999999998876533 479999999874 222 2 49999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC--CCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHH
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY--GRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 262 (352)
++..++|+++.++...++++++++|+|||++++.+. ..+......... ........... ...++.+++.++++
T Consensus 253 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~ll~ 327 (374)
T 1qzz_A 253 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRADVEGDGADRFFST--LLDLRMLTFMG---GRVRTRDEVVDLAG 327 (374)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCH-------HHHHH--HHHHHHHHHHS---CCCCCHHHHHHHHH
T ss_pred EEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEechhhcCCCCCcchhh--hcchHHHHhCC---CcCCCHHHHHHHHH
Confidence 999999999766778999999999999999999877 322111000000 00000000001 13479999999999
Q ss_pred hCCCceEEeee
Q psy11741 263 SAGFVEKQNLI 273 (352)
Q Consensus 263 ~~Gf~~~~~~~ 273 (352)
++||+++....
T Consensus 328 ~aGf~~~~~~~ 338 (374)
T 1qzz_A 328 SAGLALASERT 338 (374)
T ss_dssp TTTEEEEEEEE
T ss_pred HCCCceEEEEE
Confidence 99999887643
No 91
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.69 E-value=4.1e-17 Score=140.74 Aligned_cols=104 Identities=14% Similarity=0.224 Sum_probs=87.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe-
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL- 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 186 (352)
+.+|||||||+|..+..+++. .+.+++|||+|+.|++.|+++....+.++.++.+|+... ..++++++||.|+.
T Consensus 61 G~rVLdiG~G~G~~~~~~~~~---~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~--~~~~~~~~FD~i~~D 135 (236)
T 3orh_A 61 GGRVLEVGFGMAIAASKVQEA---PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp CEEEEEECCTTSHHHHHHTTS---CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred CCeEEEECCCccHHHHHHHHh---CCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhh--cccccccCCceEEEe
Confidence 889999999999999998875 346899999999999999999887778899999887642 22456788999975
Q ss_pred ----hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 ----IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ----~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
...++|+ .+...++++++|+|||||+|++.
T Consensus 136 ~~~~~~~~~~~--~~~~~~~~e~~rvLkPGG~l~f~ 169 (236)
T 3orh_A 136 TYPLSEETWHT--HQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp CCCCBGGGTTT--HHHHHHHHTHHHHEEEEEEEEEC
T ss_pred eeecccchhhh--cchhhhhhhhhheeCCCCEEEEE
Confidence 4455666 78999999999999999999874
No 92
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.69 E-value=1.6e-16 Score=135.10 Aligned_cols=142 Identities=13% Similarity=0.114 Sum_probs=105.1
Q ss_pred CCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 104 DTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 104 ~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
...++.+|||+|||+|.++..+++..+ +..+|+|+|+|+.|++.+++++... .|+..+.+|+.... ..+...+++|+
T Consensus 74 ~ikpG~~VldlG~G~G~~~~~la~~VG-~~G~V~avD~s~~~~~~l~~~a~~~-~ni~~V~~d~~~p~-~~~~~~~~vDv 150 (233)
T 4df3_A 74 PVKEGDRILYLGIASGTTASHMSDIIG-PRGRIYGVEFAPRVMRDLLTVVRDR-RNIFPILGDARFPE-KYRHLVEGVDG 150 (233)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHC-TTCEEEEEECCHHHHHHHHHHSTTC-TTEEEEESCTTCGG-GGTTTCCCEEE
T ss_pred CCCCCCEEEEecCcCCHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHhhHhh-cCeeEEEEeccCcc-ccccccceEEE
Confidence 455699999999999999999999876 6779999999999999999887653 58999999987543 23455688999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
|++.. .+. ++...++.++.+.|||||.+++....... ... ... . ....+..+.+++
T Consensus 151 Vf~d~--~~~--~~~~~~l~~~~r~LKpGG~lvI~ik~r~~-d~~---------------~p~-~---~~~~~ev~~L~~ 206 (233)
T 4df3_A 151 LYADV--AQP--EQAAIVVRNARFFLRDGGYMLMAIKARSI-DVT---------------TEP-S---EVYKREIKTLMD 206 (233)
T ss_dssp EEECC--CCT--THHHHHHHHHHHHEEEEEEEEEEEECCHH-HHH---------------TCC-C---HHHHHHHHHHHH
T ss_pred EEEec--cCC--hhHHHHHHHHHHhccCCCEEEEEEecccC-CCC---------------CCh-H---HHHHHHHHHHHH
Confidence 98642 332 67788999999999999999986432210 000 000 0 112344567889
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
+||+.++..
T Consensus 207 ~GF~l~e~i 215 (233)
T 4df3_A 207 GGLEIKDVV 215 (233)
T ss_dssp TTCCEEEEE
T ss_pred CCCEEEEEE
Confidence 999988753
No 93
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.69 E-value=2.8e-16 Score=129.20 Aligned_cols=128 Identities=16% Similarity=0.133 Sum_probs=100.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|+++....+ .++ ++.+|+.+ .++..+++||+|
T Consensus 25 ~~~~vldiG~G~G~~~~~l~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~---~~~~~~~~~D~i 98 (178)
T 3hm2_A 25 PHETLWDIGGGSGSIAIEWLRST--PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPR---AFDDVPDNPDVI 98 (178)
T ss_dssp TTEEEEEESTTTTHHHHHHHTTS--SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTG---GGGGCCSCCSEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHh---hhhccCCCCCEE
Confidence 37799999999999999999976 68899999999999999999876543 267 88888754 333323789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..++++ ..+++++.++|+|||.+++..... .+...+..++++.
T Consensus 99 ~~~~~~~~------~~~l~~~~~~L~~gG~l~~~~~~~-----------------------------~~~~~~~~~~~~~ 143 (178)
T 3hm2_A 99 FIGGGLTA------PGVFAAAWKRLPVGGRLVANAVTV-----------------------------ESEQMLWALRKQF 143 (178)
T ss_dssp EECC-TTC------TTHHHHHHHTCCTTCEEEEEECSH-----------------------------HHHHHHHHHHHHH
T ss_pred EECCcccH------HHHHHHHHHhcCCCCEEEEEeecc-----------------------------ccHHHHHHHHHHc
Confidence 99888776 578999999999999999976542 2345677888889
Q ss_pred CCceEEeeeee
Q psy11741 265 GFVEKQNLIDR 275 (352)
Q Consensus 265 Gf~~~~~~~~~ 275 (352)
|+.........
T Consensus 144 ~~~~~~~~~~~ 154 (178)
T 3hm2_A 144 GGTISSFAISH 154 (178)
T ss_dssp CCEEEEEEEEE
T ss_pred CCeeEEEEeec
Confidence 98887765543
No 94
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.69 E-value=5.7e-17 Score=148.79 Aligned_cols=149 Identities=14% Similarity=0.149 Sum_probs=109.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|++. .+++++.+|+.+ +++.+ |+|++
T Consensus 201 ~~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-----~~p~~--D~v~~ 265 (364)
T 3p9c_A 201 GLGTLVDVGGGVGATVAAIAAHY--PTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-----EVPSG--DTILM 265 (364)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCCC--SEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHHC--CCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-----CCCCC--CEEEe
Confidence 36899999999999999999987 8889999999 8888877643 579999999874 23333 99999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhH--hhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQL--RFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
..++|++++++...+|++++++|+|||+|++.+...+..... ................. ....++.+++..+++++
T Consensus 266 ~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~m~~~~~--~g~~rt~~e~~~ll~~A 343 (364)
T 3p9c_A 266 KWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPVNPEANPSSQGVFHVDMIMLAHNP--GGRERYEREFQALARGA 343 (364)
T ss_dssp ESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSCCSSHHHHHHHHHHHHHHHHCS--SCCCCBHHHHHHHHHHT
T ss_pred hHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCCCCcchhhhhHHHhHHHHHhccc--CCccCCHHHHHHHHHHC
Confidence 999999988889999999999999999999988654321000 00000000000000000 11236899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||+.++..
T Consensus 344 GF~~v~~~ 351 (364)
T 3p9c_A 344 GFTGVKST 351 (364)
T ss_dssp TCCEEEEE
T ss_pred CCceEEEE
Confidence 99998864
No 95
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.68 E-value=7.8e-16 Score=129.68 Aligned_cols=120 Identities=12% Similarity=0.127 Sum_probs=98.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|+++....+ .++.+..+|+.+. ++ ..++||+|+
T Consensus 40 ~~~~vLDiG~G~G~~~~~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~---~~-~~~~~D~i~ 113 (204)
T 3e05_A 40 DDLVMWDIGAGSASVSIEASNLM--PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG---LD-DLPDPDRVF 113 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHC--TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT---CT-TSCCCSEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh---hh-cCCCCCEEE
Confidence 47899999999999999999975 66899999999999999999876533 5799999998642 21 236799999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+++ +...+++++.++|+|||++++..... .+.+++..+++++|
T Consensus 114 ~~~~~~-----~~~~~l~~~~~~LkpgG~l~~~~~~~-----------------------------~~~~~~~~~l~~~g 159 (204)
T 3e05_A 114 IGGSGG-----MLEEIIDAVDRRLKSEGVIVLNAVTL-----------------------------DTLTKAVEFLEDHG 159 (204)
T ss_dssp ESCCTT-----CHHHHHHHHHHHCCTTCEEEEEECBH-----------------------------HHHHHHHHHHHHTT
T ss_pred ECCCCc-----CHHHHHHHHHHhcCCCeEEEEEeccc-----------------------------ccHHHHHHHHHHCC
Confidence 987654 56789999999999999999975431 23567888999999
Q ss_pred C
Q psy11741 266 F 266 (352)
Q Consensus 266 f 266 (352)
|
T Consensus 160 ~ 160 (204)
T 3e05_A 160 Y 160 (204)
T ss_dssp C
T ss_pred C
Confidence 9
No 96
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.68 E-value=1e-16 Score=146.48 Aligned_cols=149 Identities=14% Similarity=0.135 Sum_probs=107.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccc--cCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEE--YKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~--~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|..+..+++.+ ++.+++++|++ .++. +++.. ....++++..+|+.+ .+ + +||+|
T Consensus 184 ~~~~vLDvG~G~G~~~~~l~~~~--p~~~~~~~D~~-~~~~--~~~~~~~~~~~~v~~~~~d~~~---~~--p--~~D~v 251 (348)
T 3lst_A 184 ATGTVADVGGGRGGFLLTVLREH--PGLQGVLLDRA-EVVA--RHRLDAPDVAGRWKVVEGDFLR---EV--P--HADVH 251 (348)
T ss_dssp SSEEEEEETCTTSHHHHHHHHHC--TTEEEEEEECH-HHHT--TCCCCCGGGTTSEEEEECCTTT---CC--C--CCSEE
T ss_pred CCceEEEECCccCHHHHHHHHHC--CCCEEEEecCH-HHhh--cccccccCCCCCeEEEecCCCC---CC--C--CCcEE
Confidence 37799999999999999999987 88899999994 4554 33332 234679999999863 22 2 89999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..++|++++++...+|++++++|||||+|++.+...+........ .......... .....++.+++.++++++
T Consensus 252 ~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~~~~~~--~~~d~~~~~~---~~~~~~t~~e~~~ll~~a 326 (348)
T 3lst_A 252 VLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEGNDAHQS--KEMDFMMLAA---RTGQERTAAELEPLFTAA 326 (348)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSSSSCCHH--HHHHHHHHHT---TSCCCCBHHHHHHHHHHT
T ss_pred EEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchh--hhcChhhhhc---CCCcCCCHHHHHHHHHHC
Confidence 99999999977777899999999999999999987644321100000 0000000000 111246899999999999
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||++++..
T Consensus 327 Gf~~~~~~ 334 (348)
T 3lst_A 327 GLRLDRVV 334 (348)
T ss_dssp TEEEEEEE
T ss_pred CCceEEEE
Confidence 99998774
No 97
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.68 E-value=1.1e-16 Score=145.47 Aligned_cols=150 Identities=13% Similarity=0.149 Sum_probs=112.8
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
.+|||+|||+|..+..+++.+ ++.+++++|+ +.+++.|+++.... ..++++..+|+.+ +++ ++||+|++
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-----~~~-~~~D~v~~ 239 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAE--PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-----EVP-SNGDIYLL 239 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHC--TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-----CCC-SSCSEEEE
T ss_pred CEEEEeCCCchHHHHHHHHHC--CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-----CCC-CCCCEEEE
Confidence 799999999999999999987 7789999999 99999999886542 3579999999874 223 57999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
..++|++++++...++++++++|+|||++++.+...+......... ........... ...++.+++.++++++||
T Consensus 240 ~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~t~~e~~~ll~~aGf 314 (334)
T 2ip2_A 240 SRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISASEPSPMSV--LWDVHLFMACA---GRHRTTEEVVDLLGRGGF 314 (334)
T ss_dssp ESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCSSSCCHHHH--HHHHHHHHHHS---CCCCBHHHHHHHHHHTTE
T ss_pred chhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCCcchhH--HhhhHhHhhCC---CcCCCHHHHHHHHHHCCC
Confidence 9999999777778999999999999999999876543211000000 00000000000 123689999999999999
Q ss_pred ceEEee
Q psy11741 267 VEKQNL 272 (352)
Q Consensus 267 ~~~~~~ 272 (352)
.++...
T Consensus 315 ~~~~~~ 320 (334)
T 2ip2_A 315 AVERIV 320 (334)
T ss_dssp EEEEEE
T ss_pred ceeEEE
Confidence 988764
No 98
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.68 E-value=2e-16 Score=145.25 Aligned_cols=153 Identities=19% Similarity=0.207 Sum_probs=114.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++.. ++.+++++|+ +.+++.|+++....+ .++++..+|+.+ .++ ..||+|
T Consensus 183 ~~~~vLDvG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~---~~~D~v 253 (360)
T 1tw3_A 183 NVRHVLDVGGGKGGFAAAIARRA--PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE---PLP---RKADAI 253 (360)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS---CCS---SCEEEE
T ss_pred cCcEEEEeCCcCcHHHHHHHHhC--CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC---CCC---CCccEE
Confidence 47899999999999999999987 7789999999 999999998876533 479999999874 222 249999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC-CCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG-RYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
++..++|+++.++...++++++++|+|||++++.+.. .++........ ........... ...++.+++.+++++
T Consensus 254 ~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~t~~e~~~ll~~ 328 (360)
T 1tw3_A 254 ILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERDDLHENSFNEQFT--ELDLRMLVFLG---GALRTREKWDGLAAS 328 (360)
T ss_dssp EEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECCBCGGGCCSHHHH--HHHHHHHHHHS---CCCCBHHHHHHHHHH
T ss_pred EEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEeccCCCCCcchhh--hccHHHhhhcC---CcCCCHHHHHHHHHH
Confidence 9999999997777789999999999999999998876 32211000000 00000000000 134789999999999
Q ss_pred CCCceEEeee
Q psy11741 264 AGFVEKQNLI 273 (352)
Q Consensus 264 ~Gf~~~~~~~ 273 (352)
+||.++....
T Consensus 329 aGf~~~~~~~ 338 (360)
T 1tw3_A 329 AGLVVEEVRQ 338 (360)
T ss_dssp TTEEEEEEEE
T ss_pred CCCeEEEEEe
Confidence 9999887643
No 99
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.67 E-value=2.1e-16 Score=135.39 Aligned_cols=117 Identities=15% Similarity=0.208 Sum_probs=96.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC-CCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA-PESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++ ..++.++++|+.+ .++++ +++||+|++
T Consensus 49 ~~~vLDiGcG~G~~~~~l~~----~~~~v~~vD~s~~~~~~a~~~----~~~~~~~~~d~~~---~~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 49 QTRVLEAGCGHGPDAARFGP----QAARWAAYDFSPELLKLARAN----APHADVYEWNGKG---ELPAGLGAPFGLIVS 117 (226)
T ss_dssp TCEEEEESCTTSHHHHHHGG----GSSEEEEEESCHHHHHHHHHH----CTTSEEEECCSCS---SCCTTCCCCEEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHH----cCCEEEEEECCHHHHHHHHHh----CCCceEEEcchhh---ccCCcCCCCEEEEEe
Confidence 78999999999999999998 456999999999999999988 3568999999964 45666 789999998
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
. .++..+++++.++|||||.++... ...+.+++...++++||
T Consensus 118 ~--------~~~~~~l~~~~~~LkpgG~l~~~~------------------------------~~~~~~~~~~~l~~~Gf 159 (226)
T 3m33_A 118 R--------RGPTSVILRLPELAAPDAHFLYVG------------------------------PRLNVPEVPERLAAVGW 159 (226)
T ss_dssp E--------SCCSGGGGGHHHHEEEEEEEEEEE------------------------------SSSCCTHHHHHHHHTTC
T ss_pred C--------CCHHHHHHHHHHHcCCCcEEEEeC------------------------------CcCCHHHHHHHHHHCCC
Confidence 6 245677889999999999999210 12355678999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.......
T Consensus 160 ~~~~~~~ 166 (226)
T 3m33_A 160 DIVAEDH 166 (226)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9887644
No 100
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.67 E-value=2.7e-16 Score=132.57 Aligned_cols=123 Identities=12% Similarity=0.209 Sum_probs=100.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..+++. +..+++|+|+|+.+++.|+++....+ .++.+.++|+.+. .+++||+|++
T Consensus 61 ~~~vLDiG~G~G~~~~~l~~~---~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~------~~~~fD~i~~ 131 (205)
T 3grz_A 61 PLTVADVGTGSGILAIAAHKL---GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLAD------VDGKFDLIVA 131 (205)
T ss_dssp CCEEEEETCTTSHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTT------CCSCEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEecccccc------CCCCceEEEE
Confidence 789999999999999998873 44599999999999999999877544 3499999998742 2578999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
...+++ ...+++++.++|+|||++++.++.. .+.+++..+++++||
T Consensus 132 ~~~~~~-----~~~~l~~~~~~L~~gG~l~~~~~~~-----------------------------~~~~~~~~~~~~~Gf 177 (205)
T 3grz_A 132 NILAEI-----LLDLIPQLDSHLNEDGQVIFSGIDY-----------------------------LQLPKIEQALAENSF 177 (205)
T ss_dssp ESCHHH-----HHHHGGGSGGGEEEEEEEEEEEEEG-----------------------------GGHHHHHHHHHHTTE
T ss_pred CCcHHH-----HHHHHHHHHHhcCCCCEEEEEecCc-----------------------------ccHHHHHHHHHHcCC
Confidence 876654 4788999999999999999975432 246778999999999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.++....
T Consensus 178 ~~~~~~~ 184 (205)
T 3grz_A 178 QIDLKMR 184 (205)
T ss_dssp EEEEEEE
T ss_pred ceEEeec
Confidence 9887643
No 101
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.67 E-value=1.2e-16 Score=137.94 Aligned_cols=108 Identities=15% Similarity=0.299 Sum_probs=87.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe-
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL- 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~- 186 (352)
+.+|||||||+|.++..+++. ...+|+|+|+|+.|++.|+++....+.++.++++|+.+. ..++++++||+|++
T Consensus 61 ~~~vLDiGcGtG~~~~~l~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~fD~V~~d 135 (236)
T 1zx0_A 61 GGRVLEVGFGMAIAASKVQEA---PIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDV--APTLPDGHFDGILYD 135 (236)
T ss_dssp CEEEEEECCTTSHHHHHHHTS---CEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHH--GGGSCTTCEEEEEEC
T ss_pred CCeEEEEeccCCHHHHHHHhc---CCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHh--hcccCCCceEEEEEC
Confidence 789999999999999999763 334899999999999999998876667899999998742 11566789999999
Q ss_pred hhhh--hccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 187 IFVL--DAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 187 ~~~l--~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.+.+ +.....+...++++++++|||||+|++.++
T Consensus 136 ~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 171 (236)
T 1zx0_A 136 TYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL 171 (236)
T ss_dssp CCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred CcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence 4442 222335667889999999999999998654
No 102
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.67 E-value=2.3e-16 Score=133.86 Aligned_cols=108 Identities=14% Similarity=0.228 Sum_probs=85.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||||||+|.++..+++.. ++.+++|+|+|+.|++.|++++...+ .++.++++|+... ...+++++||.|++
T Consensus 39 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l--~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 39 NPIHIEVGTGKGQFISGMAKQN--PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTL--TDVFEPGEVKRVYL 114 (213)
T ss_dssp CCEEEEECCTTSHHHHHHHHHC--TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGH--HHHCCTTSCCEEEE
T ss_pred CceEEEEecCCCHHHHHHHHHC--CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHH--HhhcCcCCcCEEEE
Confidence 6789999999999999999976 78899999999999999999876543 5799999998741 11145788999987
Q ss_pred hhhhhccChh------HHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 187 IFVLDAINPN------KMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 187 ~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+...+.... ....+++++.++|+|||.|++.+
T Consensus 115 ~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEEe
Confidence 6543222100 13678999999999999999975
No 103
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.67 E-value=1.6e-15 Score=147.54 Aligned_cols=158 Identities=10% Similarity=0.127 Sum_probs=111.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-------CCCceEEEEecCCCCCCCCCCCCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-------KPDRCHAFVCDVTSEDWNPPFAPES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-------~~~~v~~~~~d~~~~~~~~~~~~~~ 180 (352)
+.+|||||||+|.++..+++... +..+|+|+|+|+.|++.|++++.. ...++.++++|+.+ +++.+++
T Consensus 722 g~rVLDVGCGTG~lai~LAr~g~-p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~d----Lp~~d~s 796 (950)
T 3htx_A 722 ASTLVDFGCGSGSLLDSLLDYPT-SLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILE----FDSRLHD 796 (950)
T ss_dssp CSEEEEETCSSSHHHHHHTSSCC-CCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTS----CCTTSCS
T ss_pred CCEEEEECCCCCHHHHHHHHhCC-CCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHh----CCcccCC
Confidence 78999999999999999998542 336999999999999999885431 22579999999984 5556789
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhh-cC--ccccC--ceeecCCCeeeeccCHH
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFK-KG--RCLQD--NFYARGDGTLVYFFTRE 255 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~-~~--~~~~~--~~~~~~~~~~~~~~~~~ 255 (352)
||+|++..+++|+++.....+++++.++|||| .+++.+++......+... .. ..... .........+...++.+
T Consensus 797 FDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~fRh~DHrFEWTRe 875 (950)
T 3htx_A 797 VDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPKFRNHDHKFEWTRE 875 (950)
T ss_dssp CCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSSCSCSSCSCCBCHH
T ss_pred eeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhcccccccccccccccccccccCcceeecHH
Confidence 99999999999997767778999999999999 888877654322111100 00 00000 00011122333457888
Q ss_pred HHHH----HHHhCCCceEEe
Q psy11741 256 EVKT----MFESAGFVEKQN 271 (352)
Q Consensus 256 ~~~~----ll~~~Gf~~~~~ 271 (352)
++.. +.++.||.+.-.
T Consensus 876 EFr~Wae~LAer~GYsVefv 895 (950)
T 3htx_A 876 QFNQWASKLGKRHNYSVEFS 895 (950)
T ss_dssp HHHHHHHHHHHHTTEEEEEE
T ss_pred HHHHHHHHHHHhcCcEEEEE
Confidence 8877 677889977544
No 104
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=1.9e-16 Score=131.23 Aligned_cols=108 Identities=16% Similarity=0.227 Sum_probs=83.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++....+ .++++.+.|+.... .+.+++||+|+
T Consensus 22 ~~~~vLDiGcG~G~~~~~la~----~~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~---~~~~~~fD~v~ 94 (185)
T 3mti_A 22 DESIVVDATMGNGNDTAFLAG----LSKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLD---HYVREPIRAAI 94 (185)
T ss_dssp TTCEEEESCCTTSHHHHHHHT----TSSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGG---GTCCSCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHH----hCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHH---hhccCCcCEEE
Confidence 378999999999999999998 46799999999999999999876533 67899987765311 13367899998
Q ss_pred ehh-hhhc----c--ChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIF-VLDA----I--NPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~-~l~~----~--~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+.. .+++ + .+++...+++++.++|||||.+++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 137 (185)
T 3mti_A 95 FNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY 137 (185)
T ss_dssp EEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred EeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence 863 2221 0 2366778899999999999999997654
No 105
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.66 E-value=3.1e-16 Score=133.55 Aligned_cols=146 Identities=10% Similarity=0.036 Sum_probs=97.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHH----HhccccC-CCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNIL----KEHEEYK-PDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a----~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.+ +++.... ..++.+.++|+.+ +++++++ |
T Consensus 28 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~----l~~~~~~-d 100 (218)
T 3mq2_A 28 DDVVLDVGTGDGKHPYKVARQN--PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAER----LPPLSGV-G 100 (218)
T ss_dssp SEEEEEESCTTCHHHHHHHHHC--TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTT----CCSCCCE-E
T ss_pred CCEEEEecCCCCHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhh----CCCCCCC-C
Confidence 7899999999999999999976 789999999999988863 3333222 2479999999984 4455555 6
Q ss_pred EEEe---hhhhh--ccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHH
Q psy11741 183 IVLL---IFVLD--AINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEV 257 (352)
Q Consensus 183 ~V~~---~~~l~--~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (352)
.|++ ...++ |+ .+...++++++++|||||.+++........... .... ........+..+.+
T Consensus 101 ~v~~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~-----~~~~------~~~~~~~~~~~~~l 167 (218)
T 3mq2_A 101 ELHVLMPWGSLLRGVL--GSSPEMLRGMAAVCRPGASFLVALNLHAWRPSV-----PEVG------EHPEPTPDSADEWL 167 (218)
T ss_dssp EEEEESCCHHHHHHHH--TSSSHHHHHHHHTEEEEEEEEEEEEGGGBTTBC-----GGGT------TCCCCCHHHHHHHH
T ss_pred EEEEEccchhhhhhhh--ccHHHHHHHHHHHcCCCcEEEEEeccccccccc-----cccc------cCCccchHHHHHHH
Confidence 6553 23332 55 455889999999999999999954221110000 0000 00001111234558
Q ss_pred HHHHHhCCCceEEeee
Q psy11741 258 KTMFESAGFVEKQNLI 273 (352)
Q Consensus 258 ~~ll~~~Gf~~~~~~~ 273 (352)
..+++++||.+.....
T Consensus 168 ~~~l~~aGf~i~~~~~ 183 (218)
T 3mq2_A 168 APRYAEAGWKLADCRY 183 (218)
T ss_dssp HHHHHHTTEEEEEEEE
T ss_pred HHHHHHcCCCceeeec
Confidence 8899999999987654
No 106
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.65 E-value=2.8e-15 Score=136.91 Aligned_cols=151 Identities=19% Similarity=0.217 Sum_probs=113.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-CCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-KPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
..+|||||||+|.++..+++++ |+.++++.|. |.+++.|+++... ...+++++.+|+.+. + ...+|+|++
T Consensus 180 ~~~v~DvGgG~G~~~~~l~~~~--p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~----~--~~~~D~~~~ 250 (353)
T 4a6d_A 180 FPLMCDLGGGAGALAKECMSLY--PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKD----P--LPEADLYIL 250 (353)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC--SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTS----C--CCCCSEEEE
T ss_pred CCeEEeeCCCCCHHHHHHHHhC--CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccC----C--CCCceEEEe
Confidence 6799999999999999999988 8899999998 7899999987654 347899999998742 2 235799999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhh-HhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQ-LRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
..++|++++++...+|++++++|+|||.+++.+...++... .... ....-.......+ ..++.+++..+++++|
T Consensus 251 ~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~~~~~~--~~~dl~ml~~~~g---~ert~~e~~~ll~~AG 325 (353)
T 4a6d_A 251 ARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDEDRRGPLLT--QLYSLNMLVQTEG---QERTPTHYHMLLSSAG 325 (353)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCTTSCCCHHH--HHHHHHHHHSSSC---CCCCHHHHHHHHHHHT
T ss_pred eeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCCCCHHH--HHHHHHHHHhCCC---cCCCHHHHHHHHHHCC
Confidence 99999998888899999999999999999998764332100 0000 0000000001111 2368999999999999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|+.+++.
T Consensus 326 f~~v~v~ 332 (353)
T 4a6d_A 326 FRDFQFK 332 (353)
T ss_dssp CEEEEEE
T ss_pred CceEEEE
Confidence 9998764
No 107
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.65 E-value=1.5e-15 Score=133.05 Aligned_cols=103 Identities=14% Similarity=0.174 Sum_probs=85.0
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
..++.+|||||||+|.++..++... ++.+|+|+|+|+.|++.|++++...+ .+++++++|+.+ ++ +++||+
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~--~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~----l~--d~~FDv 191 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHV--YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV----ID--GLEFDV 191 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHT--TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG----GG--GCCCSE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh----CC--CCCcCE
Confidence 4458999999999998775544443 68899999999999999999876533 689999999874 33 689999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
|++... . ++...+++++.++|||||+|++...
T Consensus 192 V~~~a~---~--~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 192 LMVAAL---A--EPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp EEECTT---C--SCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred EEECCC---c--cCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 998554 3 6778999999999999999999764
No 108
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.65 E-value=1e-15 Score=125.12 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=95.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+ +|+|+|+|+.|++. ..++.+.++|+.+ ++++++||+|+++
T Consensus 24 ~~~vLD~GcG~G~~~~~l~~----~~-~v~gvD~s~~~~~~--------~~~~~~~~~d~~~-----~~~~~~fD~i~~n 85 (170)
T 3q87_B 24 MKIVLDLGTSTGVITEQLRK----RN-TVVSTDLNIRALES--------HRGGNLVRADLLC-----SINQESVDVVVFN 85 (170)
T ss_dssp SCEEEEETCTTCHHHHHHTT----TS-EEEEEESCHHHHHT--------CSSSCEEECSTTT-----TBCGGGCSEEEEC
T ss_pred CCeEEEeccCccHHHHHHHh----cC-cEEEEECCHHHHhc--------ccCCeEEECChhh-----hcccCCCCEEEEC
Confidence 67999999999999999988 55 99999999999987 2468899999874 2345899999998
Q ss_pred hhhhccChh-------HHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHH
Q psy11741 188 FVLDAINPN-------KMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTM 260 (352)
Q Consensus 188 ~~l~~~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (352)
..+++.+.. +...+++++.+.| |||.+++..... .+.+++.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~~~~-----------------------------~~~~~l~~~ 135 (170)
T 3q87_B 86 PPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLVIEA-----------------------------NRPKEVLAR 135 (170)
T ss_dssp CCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEEEGG-----------------------------GCHHHHHHH
T ss_pred CCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEEecC-----------------------------CCHHHHHHH
Confidence 777754322 4467888888888 999999975321 357789999
Q ss_pred HHhCCCceEEeee
Q psy11741 261 FESAGFVEKQNLI 273 (352)
Q Consensus 261 l~~~Gf~~~~~~~ 273 (352)
++++||..+....
T Consensus 136 l~~~gf~~~~~~~ 148 (170)
T 3q87_B 136 LEERGYGTRILKV 148 (170)
T ss_dssp HHHTTCEEEEEEE
T ss_pred HHHCCCcEEEEEe
Confidence 9999999887654
No 109
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.65 E-value=1.8e-15 Score=127.37 Aligned_cols=125 Identities=10% Similarity=0.055 Sum_probs=99.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-C-ceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-D-RCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~-~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|++++...+ . ++.++.+|+.+. ++ ...+||+|
T Consensus 55 ~~~~vLDlGcG~G~~~~~la~----~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~---~~-~~~~~D~v 126 (204)
T 3njr_A 55 RGELLWDIGGGSGSVSVEWCL----AGGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA---LA-DLPLPEAV 126 (204)
T ss_dssp TTCEEEEETCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG---GT-TSCCCSEE
T ss_pred CCCEEEEecCCCCHHHHHHHH----cCCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh---cc-cCCCCCEE
Confidence 378999999999999999998 46799999999999999999876543 3 799999998752 22 23579999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++...+ +.. +++++.++|||||++++..... -+..++..++++.
T Consensus 127 ~~~~~~------~~~-~l~~~~~~LkpgG~lv~~~~~~-----------------------------~~~~~~~~~l~~~ 170 (204)
T 3njr_A 127 FIGGGG------SQA-LYDRLWEWLAPGTRIVANAVTL-----------------------------ESETLLTQLHARH 170 (204)
T ss_dssp EECSCC------CHH-HHHHHHHHSCTTCEEEEEECSH-----------------------------HHHHHHHHHHHHH
T ss_pred EECCcc------cHH-HHHHHHHhcCCCcEEEEEecCc-----------------------------ccHHHHHHHHHhC
Confidence 986632 344 9999999999999999976542 2356678889999
Q ss_pred CCceEEeeeee
Q psy11741 265 GFVEKQNLIDR 275 (352)
Q Consensus 265 Gf~~~~~~~~~ 275 (352)
|+.+.......
T Consensus 171 g~~i~~i~~~~ 181 (204)
T 3njr_A 171 GGQLLRIDIAQ 181 (204)
T ss_dssp CSEEEEEEEEE
T ss_pred CCcEEEEEeec
Confidence 98888765533
No 110
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.65 E-value=1.8e-15 Score=127.66 Aligned_cols=153 Identities=12% Similarity=0.138 Sum_probs=100.8
Q ss_pred hccccCCCHHHHHHhhHHhhhh--HHHHhhhcccccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHH
Q psy11741 47 NNSVLQIDKNLIQTLNEDVAKN--WDAFYNVHQNRFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFP 124 (352)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~y--w~~~y~~~~~~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~ 124 (352)
......+++...+.+....... |+.+|......- ....+....+..+.... ..++.+|||+|||+|.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~------~~~~~~vLDiG~G~G~~~~~ 82 (207)
T 1jsx_A 10 KDAGISLTDHQKNQLIAYVNMLHKWNKAYNLTSVRD-PNEMLVRHILDSIVVAP------YLQGERFIDVGTGPGLPGIP 82 (207)
T ss_dssp HTTTCCCCHHHHHHHHHHHHHHHHHC-------------CHHHHHHHHHHHHGG------GCCSSEEEEETCTTTTTHHH
T ss_pred HHcCCCCCHHHHHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHhhhhhhh------hcCCCeEEEECCCCCHHHHH
Confidence 3444566666666666554443 455554322110 11112222233222211 11267999999999999999
Q ss_pred HHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEehhhhhccChhHHHHHHH
Q psy11741 125 IVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLDAINPNKMQHVIN 203 (352)
Q Consensus 125 l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~ 203 (352)
++... ++.+++|+|+|+.+++.|+++....+ .++.+..+|+.+. + +.++||+|++.. + .++..+++
T Consensus 83 l~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~-~~~~~D~i~~~~----~--~~~~~~l~ 149 (207)
T 1jsx_A 83 LSIVR--PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEF----P-SEPPFDGVISRA----F--ASLNDMVS 149 (207)
T ss_dssp HHHHC--TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTS----C-CCSCEEEEECSC----S--SSHHHHHH
T ss_pred HHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhC----C-ccCCcCEEEEec----c--CCHHHHHH
Confidence 99876 67899999999999999999876543 3599999998742 2 357899999854 2 45678999
Q ss_pred HHHHhcCCCEEEEEEe
Q psy11741 204 QVYKYLKPGGMVLFRD 219 (352)
Q Consensus 204 ~~~~~LkpgG~l~~~~ 219 (352)
.+.++|+|||.+++..
T Consensus 150 ~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 150 WCHHLPGEQGRFYALK 165 (207)
T ss_dssp HHTTSEEEEEEEEEEE
T ss_pred HHHHhcCCCcEEEEEe
Confidence 9999999999999963
No 111
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.64 E-value=5.4e-16 Score=132.58 Aligned_cols=151 Identities=17% Similarity=0.205 Sum_probs=94.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC-HHHHHHH---HhccccCC-CceEEEEecCCCCCCCCCCC-CCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS-ENAVNIL---KEHEEYKP-DRCHAFVCDVTSEDWNPPFA-PESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s-~~~l~~a---~~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~f 181 (352)
+.+|||||||+|.++..+++.. ++.+|+|+|+| +.|++.| +++....+ .++.+.++|+... +.. .+.+
T Consensus 25 ~~~vLDiGCG~G~~~~~la~~~--~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l----~~~~~d~v 98 (225)
T 3p2e_A 25 DRVHIDLGTGDGRNIYKLAIND--QNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESL----PFELKNIA 98 (225)
T ss_dssp SEEEEEETCTTSHHHHHHHHTC--TTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBC----CGGGTTCE
T ss_pred CCEEEEEeccCcHHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHh----hhhccCeE
Confidence 7799999999999999998654 88999999999 7777776 77765533 5799999998743 211 2445
Q ss_pred eEEEehhhhhcc---ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHH
Q psy11741 182 DIVLLIFVLDAI---NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVK 258 (352)
Q Consensus 182 D~V~~~~~l~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (352)
|.|++.+...+. ...+...++++++++|||||.+++............+... ....... .++..+++.
T Consensus 99 ~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~--------~~~~~~~-~~~~~~el~ 169 (225)
T 3p2e_A 99 DSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEFVTTYSDSYEEAEIKKR--------GLPLLSK-AYFLSEQYK 169 (225)
T ss_dssp EEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEEEECCCC----------------------CCH-HHHHSHHHH
T ss_pred EEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEEEEeccccchhchhhhc--------CCCCCCh-hhcchHHHH
Confidence 555554322111 0012356899999999999999983321111100000000 0000001 112223599
Q ss_pred HHHHhCCCceEEeee
Q psy11741 259 TMFESAGFVEKQNLI 273 (352)
Q Consensus 259 ~ll~~~Gf~~~~~~~ 273 (352)
.+++++||.+.....
T Consensus 170 ~~l~~aGf~v~~~~~ 184 (225)
T 3p2e_A 170 AELSNSGFRIDDVKE 184 (225)
T ss_dssp HHHHHHTCEEEEEEE
T ss_pred HHHHHcCCCeeeeee
Confidence 999999999887654
No 112
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.64 E-value=1.2e-15 Score=129.63 Aligned_cols=110 Identities=20% Similarity=0.323 Sum_probs=91.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++ .+++|+|+|+. ++.+.++|+.+ +++++++||+|++.
T Consensus 68 ~~~vLDiG~G~G~~~~~l~-------~~v~~~D~s~~--------------~~~~~~~d~~~----~~~~~~~fD~v~~~ 122 (215)
T 2zfu_A 68 SLVVADFGCGDCRLASSIR-------NPVHCFDLASL--------------DPRVTVCDMAQ----VPLEDESVDVAVFC 122 (215)
T ss_dssp TSCEEEETCTTCHHHHHCC-------SCEEEEESSCS--------------STTEEESCTTS----CSCCTTCEEEEEEE
T ss_pred CCeEEEECCcCCHHHHHhh-------ccEEEEeCCCC--------------CceEEEecccc----CCCCCCCEeEEEEe
Confidence 6799999999999887763 37999999986 36788899874 45667899999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.++|+ .+...+++++.++|+|||.+++.++.. .+.+.+++..+++++||.
T Consensus 123 ~~l~~---~~~~~~l~~~~~~L~~gG~l~i~~~~~---------------------------~~~~~~~~~~~l~~~Gf~ 172 (215)
T 2zfu_A 123 LSLMG---TNIRDFLEEANRVLKPGGLLKVAEVSS---------------------------RFEDVRTFLRAVTKLGFK 172 (215)
T ss_dssp SCCCS---SCHHHHHHHHHHHEEEEEEEEEEECGG---------------------------GCSCHHHHHHHHHHTTEE
T ss_pred hhccc---cCHHHHHHHHHHhCCCCeEEEEEEcCC---------------------------CCCCHHHHHHHHHHCCCE
Confidence 99863 578899999999999999999986432 113789999999999999
Q ss_pred eEEee
Q psy11741 268 EKQNL 272 (352)
Q Consensus 268 ~~~~~ 272 (352)
++...
T Consensus 173 ~~~~~ 177 (215)
T 2zfu_A 173 IVSKD 177 (215)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88753
No 113
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.64 E-value=3.4e-16 Score=135.60 Aligned_cols=171 Identities=15% Similarity=0.190 Sum_probs=114.4
Q ss_pred chhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCc--cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-Cc
Q psy11741 83 DRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGV--GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DR 159 (352)
Q Consensus 83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~--G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~ 159 (352)
++.|+.+.+..+.... ...+|||||||+ +..+..+++... ++.+|+++|.|+.|++.|++++...+ .+
T Consensus 62 nr~fl~rav~~l~~~~--------g~~q~LDLGcG~pT~~~~~~la~~~~-P~arVv~VD~sp~mLa~Ar~~l~~~~~~~ 132 (277)
T 3giw_A 62 NRDWMNRAVAHLAKEA--------GIRQFLDIGTGIPTSPNLHEIAQSVA-PESRVVYVDNDPIVLTLSQGLLASTPEGR 132 (277)
T ss_dssp HHHHHHHHHHHHHHTS--------CCCEEEEESCCSCCSSCHHHHHHHHC-TTCEEEEEECCHHHHHTTHHHHCCCSSSE
T ss_pred HHHHHHHHHHHhcccc--------CCCEEEEeCCCCCcccHHHHHHHHHC-CCCEEEEEeCChHHHHHHHHHhccCCCCc
Confidence 4555555555554321 146899999997 445566665443 78899999999999999999876432 47
Q ss_pred eEEEEecCCCCCCCC--CCCCCcce-----EEEehhhhhccChhH-HHHHHHHHHHhcCCCEEEEEEeCCCCch-hhHhh
Q psy11741 160 CHAFVCDVTSEDWNP--PFAPESLD-----IVLLIFVLDAINPNK-MQHVINQVYKYLKPGGMVLFRDYGRYDL-VQLRF 230 (352)
Q Consensus 160 v~~~~~d~~~~~~~~--~~~~~~fD-----~V~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~-~~~~~ 230 (352)
+.++++|+.+....+ +...+.|| .|+++.+|||+++.+ +..+++++++.|+|||+|++.+...... .....
T Consensus 133 ~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~p~~~~~ 212 (277)
T 3giw_A 133 TAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLPSGSYLAMSIGTAEFAPQEVGR 212 (277)
T ss_dssp EEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSCTTCEEEEEEECCTTSHHHHHH
T ss_pred EEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCCCCcEEEEEeccCCCCHHHHHH
Confidence 999999998531000 10023344 588899999996544 7899999999999999999987765321 11100
Q ss_pred hcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 231 KKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
.. ..+.. .+....+.+.+++..+|. ||+.++-
T Consensus 213 ~~------~~~~~-~g~p~~~rs~~ei~~~f~--GlelveP 244 (277)
T 3giw_A 213 VA------REYAA-RNMPMRLRTHAEAEEFFE--GLELVEP 244 (277)
T ss_dssp HH------HHHHH-TTCCCCCCCHHHHHHTTT--TSEECTT
T ss_pred HH------HHHHh-cCCCCccCCHHHHHHHhC--CCcccCC
Confidence 00 00111 122345689999999994 9997653
No 114
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.63 E-value=5.1e-16 Score=142.00 Aligned_cols=145 Identities=19% Similarity=0.174 Sum_probs=107.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|++. .++++..+|+.+ +++ .||+|++.
T Consensus 189 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~p--~~D~v~~~ 253 (352)
T 1fp2_A 189 LESIVDVGGGTGTTAKIICETF--PKLKCIVFDR-PQVVENLSGS-----NNLTYVGGDMFT-----SIP--NADAVLLK 253 (352)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHTTCCCB-----TTEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred CceEEEeCCCccHHHHHHHHHC--CCCeEEEeeC-HHHHhhcccC-----CCcEEEeccccC-----CCC--CccEEEee
Confidence 6799999999999999999987 7889999999 9999887653 349999999864 222 39999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCC---CEEEEEEeCCCCchhh----HhhhcCccccCceeecCCCeeeeccCHHHHHHH
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKP---GGMVLFRDYGRYDLVQ----LRFKKGRCLQDNFYARGDGTLVYFFTREEVKTM 260 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (352)
.++||++..+...+|++++++||| ||++++.+...+.... ..... .......... ...++.+++..+
T Consensus 254 ~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~--~~d~~~~~~~----g~~~t~~e~~~l 327 (352)
T 1fp2_A 254 YILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDKKKDENQVTQIKL--LMDVNMACLN----GKERNEEEWKKL 327 (352)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECTTTSCHHHHHHHH--HHHHHGGGGT----CCCEEHHHHHHH
T ss_pred hhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCCCCCccchhhhHh--hccHHHHhcc----CCCCCHHHHHHH
Confidence 999999766667999999999999 9999998764332110 00000 0000000001 123689999999
Q ss_pred HHhCCCceEEeee
Q psy11741 261 FESAGFVEKQNLI 273 (352)
Q Consensus 261 l~~~Gf~~~~~~~ 273 (352)
++++||+++....
T Consensus 328 l~~aGf~~~~~~~ 340 (352)
T 1fp2_A 328 FIEAGFQHYKISP 340 (352)
T ss_dssp HHHTTCCEEEEEE
T ss_pred HHHCCCCeeEEEe
Confidence 9999999887643
No 115
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.63 E-value=2e-15 Score=133.33 Aligned_cols=128 Identities=19% Similarity=0.281 Sum_probs=102.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..++... ++.+|+|+|+|+.+++.|+++....+ .++.+.++|+.+. +++++||+|++
T Consensus 110 ~~~vLDlG~GsG~~~~~la~~~--~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-----~~~~~fD~Iv~ 182 (276)
T 2b3t_A 110 PCRILDLGTGTGAIALALASER--PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-----LAGQQFAMIVS 182 (276)
T ss_dssp CCEEEEETCTTSHHHHHHHHHC--TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-----GTTCCEEEEEE
T ss_pred CCEEEEecCCccHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-----cccCCccEEEE
Confidence 6799999999999999999876 77899999999999999999976533 4699999998742 23578999999
Q ss_pred hh-------------hhhccC----------hhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeec
Q psy11741 187 IF-------------VLDAIN----------PNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYAR 243 (352)
Q Consensus 187 ~~-------------~l~~~~----------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (352)
+. +++|.+ ......+++.+.++|+|||++++...
T Consensus 183 npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~~~----------------------- 239 (276)
T 2b3t_A 183 NPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHG----------------------- 239 (276)
T ss_dssp CCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEECC-----------------------
T ss_pred CCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEEEC-----------------------
Confidence 72 333221 14668899999999999999999621
Q ss_pred CCCeeeeccCHHHHHHHHHhCCCceEEee
Q psy11741 244 GDGTLVYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 244 ~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
..+.+++.++++++||..+...
T Consensus 240 -------~~~~~~~~~~l~~~Gf~~v~~~ 261 (276)
T 2b3t_A 240 -------WQQGEAVRQAFILAGYHDVETC 261 (276)
T ss_dssp -------SSCHHHHHHHHHHTTCTTCCEE
T ss_pred -------chHHHHHHHHHHHCCCcEEEEE
Confidence 1357789999999999877654
No 116
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.63 E-value=2.7e-16 Score=144.92 Aligned_cols=149 Identities=13% Similarity=0.119 Sum_probs=107.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|++. .+++++.+|+.+ +++. ||+|++
T Consensus 209 ~~~~vLDvG~G~G~~~~~l~~~~--~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~~--~D~v~~ 273 (372)
T 1fp1_D 209 GISTLVDVGGGSGRNLELIISKY--PLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-----SVPQ--GDAMIL 273 (372)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHC--TTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-----CCCC--EEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHHC--CCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-----CCCC--CCEEEE
Confidence 36799999999999999999987 7789999999 9999877653 459999999874 2333 999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhh-h-cCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRF-K-KGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
..++||++.++...+|++++++|+|||++++.+...+....... . .............. ...++.+++..+++++
T Consensus 274 ~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~~t~~e~~~ll~~a 350 (372)
T 1fp1_D 274 KAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFITVG---GRERTEKQYEKLSKLS 350 (372)
T ss_dssp ESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECSSCCSSHHHHHHHHHHHHHHHHHS---CCCEEHHHHHHHHHHT
T ss_pred ecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCCCccchHHHHHHHhhHHHHhccC---CccCCHHHHHHHHHHC
Confidence 99999997666679999999999999999998653321100000 0 00000000000000 1236899999999999
Q ss_pred CCceEEeee
Q psy11741 265 GFVEKQNLI 273 (352)
Q Consensus 265 Gf~~~~~~~ 273 (352)
||+++....
T Consensus 351 Gf~~~~~~~ 359 (372)
T 1fp1_D 351 GFSKFQVAC 359 (372)
T ss_dssp TCSEEEEEE
T ss_pred CCceEEEEE
Confidence 999987643
No 117
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.63 E-value=3.1e-15 Score=128.48 Aligned_cols=137 Identities=16% Similarity=0.303 Sum_probs=98.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|++++... .++.++.+|+.......++. ++||+|+
T Consensus 74 ~~~~VLDlGcG~G~~~~~la~~~--~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~-~~~D~v~- 148 (230)
T 1fbn_A 74 RDSKILYLGASAGTTPSHVADIA--DKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIV-EKVDVIY- 148 (230)
T ss_dssp TTCEEEEESCCSSHHHHHHHHHT--TTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTS-CCEEEEE-
T ss_pred CCCEEEEEcccCCHHHHHHHHHc--CCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccC-ccEEEEE-
Confidence 47899999999999999999975 3468999999999999999887654 78999999987421113444 7899998
Q ss_pred hhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 187 IFVLDAI-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 187 ~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+++ .+.....+++++.++|+|||.+++. +..... . .... ...+..+++. +++++|
T Consensus 149 ----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~-~~~~~~------~----------~~~~--~~~~~~~~l~-~l~~~G 204 (230)
T 1fbn_A 149 ----EDVAQPNQAEILIKNAKWFLKKGGYGMIA-IKARSI------D----------VTKD--PKEIFKEQKE-ILEAGG 204 (230)
T ss_dssp ----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE-EEGGGT------C----------SSSC--HHHHHHHHHH-HHHHHT
T ss_pred ----EecCChhHHHHHHHHHHHhCCCCcEEEEE-EecCCC------C----------CCCC--HHHhhHHHHH-HHHHCC
Confidence 333 2344577899999999999999996 211000 0 0000 0012346777 889999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|..+...
T Consensus 205 f~~~~~~ 211 (230)
T 1fbn_A 205 FKIVDEV 211 (230)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9887653
No 118
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.63 E-value=1.6e-16 Score=129.00 Aligned_cols=103 Identities=14% Similarity=0.201 Sum_probs=85.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++... |+.+|+|+|+|+.|++.+++++...+....+...|... . .+.++||+|++.
T Consensus 50 ~~~VLDlGCG~GplAl~l~~~~--p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~---~--~~~~~~DvVLa~ 122 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQWNEN--EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKES---D--VYKGTYDVVFLL 122 (200)
T ss_dssp CSEEEEETCTTHHHHHHHHCSS--CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHH---H--HTTSEEEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhcC--CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccc---c--CCCCCcChhhHh
Confidence 6799999999999999998865 77899999999999999999987655433344466542 1 346889999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.++|++ ++....+.++.+.|+|||+++--.
T Consensus 123 k~LHlL--~~~~~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 123 KMLPVL--KQQDVNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp TCHHHH--HHTTCCHHHHHHTCEEEEEEEEEE
T ss_pred hHHHhh--hhhHHHHHHHHHHhCCCCEEEEeC
Confidence 999999 778888889999999999888753
No 119
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.62 E-value=3.6e-16 Score=133.03 Aligned_cols=111 Identities=17% Similarity=0.148 Sum_probs=87.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||||||+|.++..+++.. ++.+|+|+|+|+.|++.|++++...+ .++.++++|+.+.. ...+++++||.|++
T Consensus 35 ~~~vLDiGcG~G~~~~~lA~~~--p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l-~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 35 APVTLEIGFGMGASLVAMAKDR--PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVL-HKMIPDNSLRMVQL 111 (218)
T ss_dssp CCEEEEESCTTCHHHHHHHHHC--TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHH-HHHSCTTCEEEEEE
T ss_pred CCeEEEEeeeChHHHHHHHHHC--CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHH-HHHcCCCChheEEE
Confidence 6799999999999999999876 78899999999999999999876543 57999999987410 10145789999998
Q ss_pred hhhhhccChhHH------HHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 187 IFVLDAINPNKM------QHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~~~~~~~~------~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
.+...+...... ..++++++++|||||+|++.+..
T Consensus 112 ~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~td~ 152 (218)
T 3dxy_A 112 FFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMATDW 152 (218)
T ss_dssp ESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEEESC
T ss_pred eCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEEeCC
Confidence 754433321221 25999999999999999997643
No 120
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.62 E-value=1.2e-15 Score=133.06 Aligned_cols=122 Identities=14% Similarity=0.181 Sum_probs=98.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+..+.+..+|+.+. +++++||+|+++
T Consensus 121 ~~~VLDiGcG~G~l~~~la~~----g~~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-----~~~~~fD~Vv~n 191 (254)
T 2nxc_A 121 GDKVLDLGTGSGVLAIAAEKL----GGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-----LPFGPFDLLVAN 191 (254)
T ss_dssp TCEEEEETCTTSHHHHHHHHT----TCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-----GGGCCEEEEEEE
T ss_pred CCEEEEecCCCcHHHHHHHHh----CCeEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhc-----CcCCCCCEEEEC
Confidence 789999999999999998883 44999999999999999998776544488888887641 235789999986
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
...+ ....++..+.++|+|||++++..+.. .+.+++...++++||.
T Consensus 192 ~~~~-----~~~~~l~~~~~~LkpgG~lils~~~~-----------------------------~~~~~v~~~l~~~Gf~ 237 (254)
T 2nxc_A 192 LYAE-----LHAALAPRYREALVPGGRALLTGILK-----------------------------DRAPLVREAMAGAGFR 237 (254)
T ss_dssp CCHH-----HHHHHHHHHHHHEEEEEEEEEEEEEG-----------------------------GGHHHHHHHHHHTTCE
T ss_pred CcHH-----HHHHHHHHHHHHcCCCCEEEEEeecc-----------------------------CCHHHHHHHHHHCCCE
Confidence 5443 45788999999999999999975321 2467899999999999
Q ss_pred eEEee
Q psy11741 268 EKQNL 272 (352)
Q Consensus 268 ~~~~~ 272 (352)
++...
T Consensus 238 ~~~~~ 242 (254)
T 2nxc_A 238 PLEEA 242 (254)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 88764
No 121
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.61 E-value=6.4e-15 Score=127.85 Aligned_cols=130 Identities=14% Similarity=0.090 Sum_probs=99.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||||||+|..+..++... ++.+|+|+|+|+.+++.|+++....+ .+++++++|+.+... .+..+++||+|+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~-~~~~~~~fD~I~ 156 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVR--PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAR-EAGHREAYARAV 156 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHC--TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTT-STTTTTCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhc-ccccCCCceEEE
Confidence 47899999999999999999876 78899999999999999999877643 469999999874321 011247899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+ .++..+++.+.++|||||++++....... -...++...++..|
T Consensus 157 s~a~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~---------------------------~e~~~~~~~l~~~G 203 (249)
T 3g89_A 157 ARAV------APLCVLSELLLPFLEVGGAAVAMKGPRVE---------------------------EELAPLPPALERLG 203 (249)
T ss_dssp EESS------CCHHHHHHHHGGGEEEEEEEEEEECSCCH---------------------------HHHTTHHHHHHHHT
T ss_pred ECCc------CCHHHHHHHHHHHcCCCeEEEEEeCCCcH---------------------------HHHHHHHHHHHHcC
Confidence 9653 35578999999999999999885422110 11234666778889
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|.+....
T Consensus 204 ~~~~~~~ 210 (249)
T 3g89_A 204 GRLGEVL 210 (249)
T ss_dssp EEEEEEE
T ss_pred CeEEEEE
Confidence 9887754
No 122
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.61 E-value=2.7e-15 Score=126.92 Aligned_cols=106 Identities=16% Similarity=0.245 Sum_probs=79.2
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+|||+|..+..+++.. ++.+|+|+|+|+.|++.+.+.++.. .++.++.+|+.......++ .++||+|+
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~--~~~~V~gvD~s~~~l~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~-~~~fD~V~ 131 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIV--DEGIIYAVEYSAKPFEKLLELVRER-NNIIPLLFDASKPWKYSGI-VEKVDLIY 131 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHT--TTSEEEEECCCHHHHHHHHHHHHHC-SSEEEECSCTTCGGGTTTT-CCCEEEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHhcC-CCeEEEEcCCCCchhhccc-ccceeEEE
Confidence 347899999999999999999876 3458999999999876655544322 4688888888752111233 37899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+.. ..+.+...++++++++|||||.|++..
T Consensus 132 ~~~----~~~~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 132 QDI----AQKNQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECC----CSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eec----cChhHHHHHHHHHHHHhCCCCEEEEEE
Confidence 862 122455567999999999999999973
No 123
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.61 E-value=2.3e-15 Score=125.99 Aligned_cols=110 Identities=16% Similarity=0.258 Sum_probs=88.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++.+. +..+|+|+|+|+.+++.|++++...+ .++.++++|+.+.. ...+++||+|+
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~~~~~fD~v~ 98 (197)
T 3eey_A 23 GDTVVDATCGNGNDTAFLASLVG-ENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMD---KYIDCPVKAVM 98 (197)
T ss_dssp TCEEEESCCTTSHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGG---GTCCSCEEEEE
T ss_pred CCEEEEcCCCCCHHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHh---hhccCCceEEE
Confidence 78999999999999999999763 45699999999999999999977643 47999999987421 13457899999
Q ss_pred ehhhhh-------ccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLD-------AINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~-------~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+...+. .....+...+++++.++|+|||++++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~ 141 (197)
T 3eey_A 99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY 141 (197)
T ss_dssp EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence 876441 112346678999999999999999998654
No 124
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=6.5e-15 Score=122.52 Aligned_cols=106 Identities=16% Similarity=0.262 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-Cc--eEEEEecCCCCCCCCCCCCCcceE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DR--CHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~--v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+ .+ +.+..+|+.+. .++++||+
T Consensus 52 ~~~~vLdiG~G~G~~~~~~~~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-----~~~~~~D~ 122 (194)
T 1dus_A 52 KDDDILDLGCGYGVIGIALADE----VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-----VKDRKYNK 122 (194)
T ss_dssp TTCEEEEETCTTSHHHHHHGGG----SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-----CTTSCEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHc----CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-----cccCCceE
Confidence 4789999999999999999884 5699999999999999999876543 33 99999998752 23678999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
|++...+++ ...+...+++++.++|+|||.+++.....
T Consensus 123 v~~~~~~~~-~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 123 IITNPPIRA-GKEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp EEECCCSTT-CHHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred EEECCCccc-chhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 999887765 23678899999999999999999986653
No 125
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.60 E-value=2.6e-15 Score=129.12 Aligned_cols=109 Identities=13% Similarity=0.241 Sum_probs=83.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-------CCCceEEEEecCCCCCCCCC--CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-------KPDRCHAFVCDVTSEDWNPP--FAP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-------~~~~v~~~~~d~~~~~~~~~--~~~ 178 (352)
+.+|||||||+|.++..+++.. ++..++|+|+|+.|++.|++++.. ...++.++++|+.+ .++ +++
T Consensus 47 ~~~vLDiGcG~G~~~~~la~~~--p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~---~l~~~~~~ 121 (235)
T 3ckk_A 47 QVEFADIGCGYGGLLVELSPLF--PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMK---HLPNFFYK 121 (235)
T ss_dssp CEEEEEETCTTCHHHHHHGGGS--TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTT---CHHHHCCT
T ss_pred CCeEEEEccCCcHHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHH---hhhhhCCC
Confidence 6789999999999999999876 778999999999999999876531 23679999999874 233 567
Q ss_pred CcceEEEehhhhhccChh------HHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 179 ESLDIVLLIFVLDAINPN------KMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++||.|++.+...+.... ....+++++.++|||||.|++.+..
T Consensus 122 ~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td~ 170 (235)
T 3ckk_A 122 GQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTITDV 170 (235)
T ss_dssp TCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEEESC
T ss_pred cCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeCC
Confidence 899999875432222000 0147999999999999999997543
No 126
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.60 E-value=6.5e-15 Score=135.32 Aligned_cols=107 Identities=20% Similarity=0.286 Sum_probs=91.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|++++...+.+++++++|+.+. ..++++||+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~----~g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~----~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLAR----MGAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEA----LTEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHH----TTCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT----SCTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhc----cccCCCeEEEEE
Confidence 377999999999999999998 566999999999999999999877666689999999753 233579999999
Q ss_pred hhhhhc---cChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 187 IFVLDA---INPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~~---~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+..+++ ...++...+++++.++|+|||.+++....
T Consensus 305 npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 305 NPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp CCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred CCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 988887 33478889999999999999999997543
No 127
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=2.2e-16 Score=133.78 Aligned_cols=130 Identities=17% Similarity=0.207 Sum_probs=81.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCC-----Ccc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAP-----ESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-----~~f 181 (352)
++.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|+++....+.++.+.++|+.+ ++++ ++|
T Consensus 30 ~~~~vLDiG~G~G~~~~~l~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-----~~~~~~~~~~~f 102 (215)
T 4dzr_A 30 SGTRVIDVGTGSGCIAVSIALAC--PGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIE-----WLIERAERGRPW 102 (215)
T ss_dssp TTEEEEEEESSBCHHHHHHHHHC--TTEEEEEEECC-------------------CCHHHHHH-----HHHHHHHTTCCB
T ss_pred CCCEEEEecCCHhHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHh-----hhhhhhhccCcc
Confidence 37899999999999999999976 68899999999999999999877644478888898874 2233 899
Q ss_pred eEEEehhhh------hccChh------------------HHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCcccc
Q psy11741 182 DIVLLIFVL------DAINPN------------------KMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQ 237 (352)
Q Consensus 182 D~V~~~~~l------~~~~~~------------------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 237 (352)
|+|+++..+ ++++.. ....+++++.++|||||++++.+...
T Consensus 103 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~--------------- 167 (215)
T 4dzr_A 103 HAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH--------------- 167 (215)
T ss_dssp SEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---------------
T ss_pred cEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---------------
Confidence 999995332 222111 12788899999999999944433321
Q ss_pred CceeecCCCeeeeccCHHHHHHHHH--hCCCceEEee
Q psy11741 238 DNFYARGDGTLVYFFTREEVKTMFE--SAGFVEKQNL 272 (352)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~ll~--~~Gf~~~~~~ 272 (352)
...+.+..+++ +.||..+...
T Consensus 168 --------------~~~~~~~~~l~~~~~gf~~~~~~ 190 (215)
T 4dzr_A 168 --------------NQADEVARLFAPWRERGFRVRKV 190 (215)
T ss_dssp --------------SCHHHHHHHTGGGGGGTEECCEE
T ss_pred --------------ccHHHHHHHHHHhhcCCceEEEE
Confidence 34667888888 8999776653
No 128
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.59 E-value=1.8e-15 Score=125.82 Aligned_cols=109 Identities=9% Similarity=0.079 Sum_probs=88.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.|++.|++++...+ .+++++++|+.+.. ..+++++||+|++
T Consensus 45 ~~~vLDlgcG~G~~~~~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 45 GLAVLDLYAGSGALGLEALSR---GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVV--AAGTTSPVDLVLA 119 (189)
T ss_dssp TCEEEEETCTTCHHHHHHHHT---TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHH--HHCCSSCCSEEEE
T ss_pred CCEEEEeCCCcCHHHHHHHHC---CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHH--hhccCCCccEEEE
Confidence 789999999999999987773 44589999999999999999876543 57999999987421 1123678999999
Q ss_pred hhhhhccChhHHHHHHHHHHH--hcCCCEEEEEEeCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYK--YLKPGGMVLFRDYGR 222 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~~ 222 (352)
...+++. .++...+++.+.+ +|+|||++++.....
T Consensus 120 ~~p~~~~-~~~~~~~l~~~~~~~~L~pgG~l~~~~~~~ 156 (189)
T 3p9n_A 120 DPPYNVD-SADVDAILAALGTNGWTREGTVAVVERATT 156 (189)
T ss_dssp CCCTTSC-HHHHHHHHHHHHHSSSCCTTCEEEEEEETT
T ss_pred CCCCCcc-hhhHHHHHHHHHhcCccCCCeEEEEEecCC
Confidence 8776543 3678899999999 999999999976543
No 129
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.59 E-value=3.4e-15 Score=131.74 Aligned_cols=126 Identities=15% Similarity=0.156 Sum_probs=100.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-C-CceEEEEecCCCCCCCCCCCCCcce
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-P-DRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~-~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
..++.+|||+|||+|.++..+++... ++.+|+|+|+|+.+++.|+++.... + .++.+.++|+.+ ++++++||
T Consensus 108 ~~~~~~VLD~G~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-----~~~~~~fD 181 (275)
T 1yb2_A 108 LRPGMDILEVGVGSGNMSSYILYALN-GKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-----FISDQMYD 181 (275)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHT-TSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-----CCCSCCEE
T ss_pred CCCcCEEEEecCCCCHHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-----cCcCCCcc
Confidence 34578999999999999999998632 5779999999999999999987654 3 579999999874 23467899
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHH
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 262 (352)
+|++ ++ .+...+++++.++|+|||++++.+... ...+++...++
T Consensus 182 ~Vi~-----~~--~~~~~~l~~~~~~LkpgG~l~i~~~~~-----------------------------~~~~~~~~~l~ 225 (275)
T 1yb2_A 182 AVIA-----DI--PDPWNHVQKIASMMKPGSVATFYLPNF-----------------------------DQSEKTVLSLS 225 (275)
T ss_dssp EEEE-----CC--SCGGGSHHHHHHTEEEEEEEEEEESSH-----------------------------HHHHHHHHHSG
T ss_pred EEEE-----cC--cCHHHHHHHHHHHcCCCCEEEEEeCCH-----------------------------HHHHHHHHHHH
Confidence 9998 33 455689999999999999999976431 12456777788
Q ss_pred hCCCceEEee
Q psy11741 263 SAGFVEKQNL 272 (352)
Q Consensus 263 ~~Gf~~~~~~ 272 (352)
++||..++..
T Consensus 226 ~~Gf~~~~~~ 235 (275)
T 1yb2_A 226 ASGMHHLETV 235 (275)
T ss_dssp GGTEEEEEEE
T ss_pred HCCCeEEEEE
Confidence 8999887764
No 130
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.58 E-value=9.1e-15 Score=121.41 Aligned_cols=123 Identities=18% Similarity=0.233 Sum_probs=96.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+ .++.+..+|+.+. ++. .++||+|
T Consensus 33 ~~~~vldiG~G~G~~~~~l~~~----~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~-~~~~D~v 104 (192)
T 1l3i_A 33 KNDVAVDVGCGTGGVTLELAGR----VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEA---LCK-IPDIDIA 104 (192)
T ss_dssp TTCEEEEESCTTSHHHHHHHTT----SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHH---HTT-SCCEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHh----cCEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHh---ccc-CCCCCEE
Confidence 3789999999999999999884 3699999999999999999876543 4789999988641 111 1589999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++..++++ ...+++.+.++|+|||.+++..+.. .+..++...+++.
T Consensus 105 ~~~~~~~~-----~~~~l~~~~~~l~~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~ 150 (192)
T 1l3i_A 105 VVGGSGGE-----LQEILRIIKDKLKPGGRIIVTAILL-----------------------------ETKFEAMECLRDL 150 (192)
T ss_dssp EESCCTTC-----HHHHHHHHHHTEEEEEEEEEEECBH-----------------------------HHHHHHHHHHHHT
T ss_pred EECCchHH-----HHHHHHHHHHhcCCCcEEEEEecCc-----------------------------chHHHHHHHHHHC
Confidence 99876643 4788999999999999999975432 2356688899999
Q ss_pred CCceEEe
Q psy11741 265 GFVEKQN 271 (352)
Q Consensus 265 Gf~~~~~ 271 (352)
||.+...
T Consensus 151 g~~~~~~ 157 (192)
T 1l3i_A 151 GFDVNIT 157 (192)
T ss_dssp TCCCEEE
T ss_pred CCceEEE
Confidence 9955433
No 131
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.58 E-value=1.8e-14 Score=122.87 Aligned_cols=141 Identities=17% Similarity=0.176 Sum_probs=92.3
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
..++.+|||+|||+|.++..+++... +..+|+|+|+|+.|++...+.+.. ..++.++++|+....... ...++||+|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~-~~G~V~avD~s~~~l~~l~~~a~~-r~nv~~i~~Da~~~~~~~-~~~~~~D~I 150 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIE-LNGKAYGVEFSPRVVRELLLVAQR-RPNIFPLLADARFPQSYK-SVVENVDVL 150 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHT-TTSEEEEEECCHHHHHHHHHHHHH-CTTEEEEECCTTCGGGTT-TTCCCEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhC-CCCEEEEEECcHHHHHHHHHHhhh-cCCeEEEEcccccchhhh-ccccceEEE
Confidence 44589999999999999999998765 566999999999987544333222 257999999987532111 124689999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++.... +.....++..+.++|||||.|++...... .... .+ ..-..++....++++
T Consensus 151 ~~d~a~----~~~~~il~~~~~~~LkpGG~lvisik~~~------------~d~t----~~----~~e~~~~~~~~L~~~ 206 (232)
T 3id6_C 151 YVDIAQ----PDQTDIAIYNAKFFLKVNGDMLLVIKARS------------IDVT----KD----PKEIYKTEVEKLENS 206 (232)
T ss_dssp EECCCC----TTHHHHHHHHHHHHEEEEEEEEEEEC-----------------------CC----SSSSTTHHHHHHHHT
T ss_pred EecCCC----hhHHHHHHHHHHHhCCCCeEEEEEEccCC------------cccC----CC----HHHHHHHHHHHHHHC
Confidence 987432 23333445566669999999999743211 0000 00 001123456677889
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||++++..
T Consensus 207 gf~~~~~~ 214 (232)
T 3id6_C 207 NFETIQII 214 (232)
T ss_dssp TEEEEEEE
T ss_pred CCEEEEEe
Confidence 99988764
No 132
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.58 E-value=1e-14 Score=124.41 Aligned_cols=110 Identities=14% Similarity=0.162 Sum_probs=86.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCC--CCCCCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNP--PFAPESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~--~~~~~~fD~ 183 (352)
+.+|||+|||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .+++++++|+.+....+ ....++||+
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~ 137 (221)
T 3u81_A 59 PSLVLELGAYCGYSAVRMARLLQ-PGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDM 137 (221)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSC-TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSE
T ss_pred CCEEEEECCCCCHHHHHHHHhCC-CCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEE
Confidence 67999999999999999999763 47899999999999999999876533 46999999975421111 112268999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
|++....++. .....++..+ ++|+|||++++.+..
T Consensus 138 V~~d~~~~~~--~~~~~~~~~~-~~LkpgG~lv~~~~~ 172 (221)
T 3u81_A 138 VFLDHWKDRY--LPDTLLLEKC-GLLRKGTVLLADNVI 172 (221)
T ss_dssp EEECSCGGGH--HHHHHHHHHT-TCCCTTCEEEESCCC
T ss_pred EEEcCCcccc--hHHHHHHHhc-cccCCCeEEEEeCCC
Confidence 9998776666 5566777777 999999999996543
No 133
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.58 E-value=3e-14 Score=125.23 Aligned_cols=99 Identities=23% Similarity=0.434 Sum_probs=83.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++.. ++.+++|+|+|+.+++.|+++. .++.+..+|+. .+++++++||+|++.
T Consensus 86 ~~~vLdiG~G~G~~~~~l~~~~--~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~----~~~~~~~~fD~v~~~ 155 (269)
T 1p91_A 86 ATAVLDIGCGEGYYTHAFADAL--PEITTFGLDVSKVAIKAAAKRY----PQVTFCVASSH----RLPFSDTSMDAIIRI 155 (269)
T ss_dssp CCEEEEETCTTSTTHHHHHHTC--TTSEEEEEESCHHHHHHHHHHC----TTSEEEECCTT----SCSBCTTCEEEEEEE
T ss_pred CCEEEEECCCCCHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcchh----hCCCCCCceeEEEEe
Confidence 7899999999999999999975 5779999999999999998874 45789999987 455667899999986
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCch
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDL 225 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 225 (352)
.+. ..++++.++|||||.+++.+++....
T Consensus 156 ~~~---------~~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 156 YAP---------CKAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp SCC---------CCHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred CCh---------hhHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 542 24788999999999999988776543
No 134
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.58 E-value=1.3e-14 Score=119.48 Aligned_cols=120 Identities=15% Similarity=0.258 Sum_probs=97.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++ ++.+++|+|+|+.+++.|+++....+ .++.+.++|+.+ ++++++||+|+
T Consensus 35 ~~~~vLdiG~G~G~~~~~l~~----~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-----~~~~~~~D~i~ 105 (183)
T 2yxd_A 35 KDDVVVDVGCGSGGMTVEIAK----RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-----VLDKLEFNKAF 105 (183)
T ss_dssp TTCEEEEESCCCSHHHHHHHT----TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-----HGGGCCCSEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHh----cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-----cccCCCCcEEE
Confidence 377999999999999999988 67799999999999999999876544 579999999874 23457899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+ .+...+++.+.++ |||.+++..... .+..++.+.++++|
T Consensus 106 ~~~~------~~~~~~l~~~~~~--~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~g 148 (183)
T 2yxd_A 106 IGGT------KNIEKIIEILDKK--KINHIVANTIVL-----------------------------ENAAKIINEFESRG 148 (183)
T ss_dssp ECSC------SCHHHHHHHHHHT--TCCEEEEEESCH-----------------------------HHHHHHHHHHHHTT
T ss_pred ECCc------ccHHHHHHHHhhC--CCCEEEEEeccc-----------------------------ccHHHHHHHHHHcC
Confidence 9876 4567888888888 999999986542 22456888999999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|.+....
T Consensus 149 ~~~~~~~ 155 (183)
T 2yxd_A 149 YNVDAVN 155 (183)
T ss_dssp CEEEEEE
T ss_pred CeEEEEE
Confidence 8776553
No 135
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.58 E-value=1.7e-14 Score=126.19 Aligned_cols=132 Identities=16% Similarity=0.157 Sum_probs=100.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.. +. +|+|+|+++.+++.|++++...+ .++.++++|+.+.. ..+++++||+|
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~--~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~--~~~~~~~fD~I 123 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRT--KA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKIT--DLIPKERADIV 123 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTC--CC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGG--GTSCTTCEEEE
T ss_pred CCCEEEEcCCchhHHHHHHHHhc--CC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhh--hhhccCCccEE
Confidence 37899999999999999999864 33 99999999999999999987543 46999999998532 12346899999
Q ss_pred Eehhhhhcc------------------ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCC
Q psy11741 185 LLIFVLDAI------------------NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDG 246 (352)
Q Consensus 185 ~~~~~l~~~------------------~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (352)
+++-.+... ...+...+++.+.++|+|||++++....
T Consensus 124 i~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~------------------------- 178 (259)
T 3lpm_A 124 TCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRP------------------------- 178 (259)
T ss_dssp EECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEEEECT-------------------------
T ss_pred EECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcH-------------------------
Confidence 995332111 1145678999999999999999995321
Q ss_pred eeeeccCHHHHHHHHHhCCCceEEeee
Q psy11741 247 TLVYFFTREEVKTMFESAGFVEKQNLI 273 (352)
Q Consensus 247 ~~~~~~~~~~~~~ll~~~Gf~~~~~~~ 273 (352)
....++...+++.||.......
T Consensus 179 -----~~~~~~~~~l~~~~~~~~~~~~ 200 (259)
T 3lpm_A 179 -----ERLLDIIDIMRKYRLEPKRIQF 200 (259)
T ss_dssp -----TTHHHHHHHHHHTTEEEEEEEE
T ss_pred -----HHHHHHHHHHHHCCCceEEEEE
Confidence 3456788889999998876543
No 136
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.57 E-value=4.7e-15 Score=134.67 Aligned_cols=102 Identities=21% Similarity=0.285 Sum_probs=82.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++. ...+|+|+|+|+ |++.|+++....+ .+++++.+|+.+ +++++++||+|
T Consensus 64 ~~~~VLDiGcGtG~ls~~la~~---g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D~I 135 (340)
T 2fyt_A 64 KDKVVLDVGCGTGILSMFAAKA---GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEE----VHLPVEKVDVI 135 (340)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTT----SCCSCSCEEEE
T ss_pred CCCEEEEeeccCcHHHHHHHHc---CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHH----hcCCCCcEEEE
Confidence 3789999999999999999884 334899999997 9999998876543 679999999974 44556899999
Q ss_pred Eehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEE
Q psy11741 185 LLIFVLDAI-NPNKMQHVINQVYKYLKPGGMVL 216 (352)
Q Consensus 185 ~~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~ 216 (352)
++..+.+.+ ...++..++..+.++|||||.++
T Consensus 136 vs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 136 ISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 987632222 23678889999999999999988
No 137
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=6e-14 Score=123.82 Aligned_cols=127 Identities=17% Similarity=0.212 Sum_probs=98.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++.. .. +|+|+|+|+.|++.|++++...+ .++++.++|+.+. .. +++||+|+
T Consensus 126 ~~~VLDlgcG~G~~~~~la~~~--~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~----~~-~~~fD~Vi 197 (278)
T 2frn_A 126 DELVVDMFAGIGHLSLPIAVYG--KA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----PG-ENIADRIL 197 (278)
T ss_dssp TCEEEETTCTTTTTHHHHHHHT--CC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----CC-CSCEEEEE
T ss_pred CCEEEEecccCCHHHHHHHHhC--CC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHh----cc-cCCccEEE
Confidence 7899999999999999999864 22 79999999999999999877543 3589999999853 22 67899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+... .....++..+.++|+|||++++.+....... .....+.+...++++|
T Consensus 198 ~~~p------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~-----------------------~~~~~~~i~~~~~~~G 248 (278)
T 2frn_A 198 MGYV------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEYG 248 (278)
T ss_dssp ECCC------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHTT
T ss_pred ECCc------hhHHHHHHHHHHHCCCCeEEEEEEeeccccc-----------------------cccHHHHHHHHHHHcC
Confidence 8532 3335788899999999999999765431100 0134677889999999
Q ss_pred CceEEe
Q psy11741 266 FVEKQN 271 (352)
Q Consensus 266 f~~~~~ 271 (352)
+.....
T Consensus 249 ~~~~~~ 254 (278)
T 2frn_A 249 YDVEKL 254 (278)
T ss_dssp CEEEEE
T ss_pred CeeEEe
Confidence 987653
No 138
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.56 E-value=9.7e-15 Score=127.43 Aligned_cols=125 Identities=14% Similarity=0.098 Sum_probs=99.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.+. ++.+++++|+|+.+++.|+++.... ..++.+..+|+.+ .++++++||+|
T Consensus 96 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~----~~~~~~~~D~v 170 (258)
T 2pwy_A 96 PGMRVLEAGTGSGGLTLFLARAVG-EKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEE----AELEEAAYDGV 170 (258)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGG----CCCCTTCEEEE
T ss_pred CCCEEEEECCCcCHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhh----cCCCCCCcCEE
Confidence 478999999999999999998743 5779999999999999999987543 3679999999874 23456789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++. . .+...+++++.++|+|||.+++..... ....++...+++.
T Consensus 171 ~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~ 214 (258)
T 2pwy_A 171 ALD-----L--MEPWKVLEKAALALKPDRFLVAYLPNI-----------------------------TQVLELVRAAEAH 214 (258)
T ss_dssp EEE-----S--SCGGGGHHHHHHHEEEEEEEEEEESCH-----------------------------HHHHHHHHHHTTT
T ss_pred EEC-----C--cCHHHHHHHHHHhCCCCCEEEEEeCCH-----------------------------HHHHHHHHHHHHC
Confidence 972 3 455688999999999999999976432 1234667778889
Q ss_pred CCceEEee
Q psy11741 265 GFVEKQNL 272 (352)
Q Consensus 265 Gf~~~~~~ 272 (352)
||..++..
T Consensus 215 gf~~~~~~ 222 (258)
T 2pwy_A 215 PFRLERVL 222 (258)
T ss_dssp TEEEEEEE
T ss_pred CCceEEEE
Confidence 99887754
No 139
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=99.56 E-value=1.8e-14 Score=132.02 Aligned_cols=143 Identities=18% Similarity=0.166 Sum_probs=106.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|||||||+|.++..+++.+ ++.+++++|+ +.+++.|++. .++++..+|+.+ +++ .||+|++.
T Consensus 194 ~~~vlDvG~G~G~~~~~l~~~~--p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-----~~~--~~D~v~~~ 258 (358)
T 1zg3_A 194 LESLVDVGGGTGGVTKLIHEIF--PHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-----SIP--SADAVLLK 258 (358)
T ss_dssp CSEEEEETCTTSHHHHHHHHHC--TTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-----CCC--CCSEEEEE
T ss_pred CCEEEEECCCcCHHHHHHHHHC--CCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-----CCC--CceEEEEc
Confidence 6799999999999999999987 7789999999 7888776542 459999999874 233 49999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCC---CEEEEEEeCCCCchh------hHhhhcCccccCceeecCCCeeeeccCHHHHH
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKP---GGMVLFRDYGRYDLV------QLRFKKGRCLQDNFYARGDGTLVYFFTREEVK 258 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~Lkp---gG~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (352)
.++|+++.++...+|++++++|+| ||++++.+...+... ....... ........ ...++.+++.
T Consensus 259 ~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~~~~~~~~~~~~~~~d----~~~~~~~~---g~~~t~~e~~ 331 (358)
T 1zg3_A 259 WVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDETSDDRGLTELQLDYD----LVMLTMFL---GKERTKQEWE 331 (358)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECTTCSCHHHHHHHHHHH----HHHHHHHS---CCCEEHHHHH
T ss_pred ccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCCCCccchhhhHHHhhC----HHHhccCC---CCCCCHHHHH
Confidence 999999766677999999999999 999999775432111 0000000 00000001 1246899999
Q ss_pred HHHHhCCCceEEee
Q psy11741 259 TMFESAGFVEKQNL 272 (352)
Q Consensus 259 ~ll~~~Gf~~~~~~ 272 (352)
++++++||+++...
T Consensus 332 ~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 332 KLIYDAGFSSYKIT 345 (358)
T ss_dssp HHHHHTTCCEEEEE
T ss_pred HHHHHcCCCeeEEE
Confidence 99999999988764
No 140
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.56 E-value=4.4e-14 Score=123.50 Aligned_cols=110 Identities=15% Similarity=0.208 Sum_probs=85.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc---CC--CceEEEEecCCCCCCC---CCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY---KP--DRCHAFVCDVTSEDWN---PPFAPE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~---~~--~~v~~~~~d~~~~~~~---~~~~~~ 179 (352)
+.+|||+|||+|.++..++... ++.+|+|+|+++.+++.|++++.. .+ .++.++++|+.+.... ..++++
T Consensus 37 ~~~VLDlG~G~G~~~l~la~~~--~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 37 ACRIADLGAGAGAAGMAVAARL--EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CEEEEECCSSSSHHHHHHHHHC--TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred CCEEEEeCChHhHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 6799999999999999999976 678999999999999999999865 43 3599999999753100 024467
Q ss_pred cceEEEehhhhh----------------ccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLD----------------AINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~----------------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+||+|+++-.+. |........+++.+.++|+|||.+++..
T Consensus 115 ~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 115 HFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp CEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 899999962211 1122347789999999999999999853
No 141
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.56 E-value=1.5e-14 Score=129.35 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=98.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++.. ..++++++.+|+.+... ...+++||
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~--~~~~~~fD 171 (304)
T 3bwc_A 96 PERVLIIGGGDGGVLREVLRHG--TVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVR--QTPDNTYD 171 (304)
T ss_dssp CCEEEEEECTTSHHHHHHHTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHH--SSCTTCEE
T ss_pred CCeEEEEcCCCCHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHH--hccCCcee
Confidence 6799999999999999999853 567999999999999999987631 24679999999864210 11367899
Q ss_pred EEEehhhhhccChhHH--HHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHH
Q psy11741 183 IVLLIFVLDAINPNKM--QHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTM 260 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 260 (352)
+|++....++.+...+ ..+++.++++|+|||++++...++.. .......+.+.
T Consensus 172 vIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~-------------------------~~~~~~~~~~~ 226 (304)
T 3bwc_A 172 VVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQGESIWL-------------------------DLELIEKMSRF 226 (304)
T ss_dssp EEEEECC---------CCHHHHHHHHHHEEEEEEEEEEECCTTT-------------------------CHHHHHHHHHH
T ss_pred EEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEecCCccc-------------------------chHHHHHHHHH
Confidence 9999665443322222 68899999999999999997533210 01235678889
Q ss_pred HHhCCCceEEee
Q psy11741 261 FESAGFVEKQNL 272 (352)
Q Consensus 261 l~~~Gf~~~~~~ 272 (352)
++++||..+...
T Consensus 227 l~~~GF~~v~~~ 238 (304)
T 3bwc_A 227 IRETGFASVQYA 238 (304)
T ss_dssp HHHHTCSEEEEE
T ss_pred HHhCCCCcEEEE
Confidence 999999987654
No 142
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.55 E-value=4.2e-14 Score=119.73 Aligned_cols=125 Identities=7% Similarity=0.075 Sum_probs=101.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++...+ .++.+.++|..+.. .++.+||+|+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~--~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~----~~~~~~D~Iv 95 (230)
T 3lec_A 22 GARLLDVGSDHAYLPIFLLQMG--YCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAF----EEADNIDTIT 95 (230)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT--CEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGC----CGGGCCCEEE
T ss_pred CCEEEEECCchHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcc----ccccccCEEE
Confidence 7799999999999999999864 56789999999999999999987654 46999999987531 2233799988
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+.++ ..+-...+|....+.|+++|.|+++-. ...+.++.++.+.|
T Consensus 96 iaGm----Gg~lI~~IL~~~~~~l~~~~~lIlqp~-------------------------------~~~~~lr~~L~~~G 140 (230)
T 3lec_A 96 ICGM----GGRLIADILNNDIDKLQHVKTLVLQPN-------------------------------NREDDLRKWLAAND 140 (230)
T ss_dssp EEEE----CHHHHHHHHHHTGGGGTTCCEEEEEES-------------------------------SCHHHHHHHHHHTT
T ss_pred EeCC----chHHHHHHHHHHHHHhCcCCEEEEECC-------------------------------CChHHHHHHHHHCC
Confidence 6544 224567889999999999999999732 24778999999999
Q ss_pred CceEEeee
Q psy11741 266 FVEKQNLI 273 (352)
Q Consensus 266 f~~~~~~~ 273 (352)
|.+++...
T Consensus 141 f~i~~E~l 148 (230)
T 3lec_A 141 FEIVAEDI 148 (230)
T ss_dssp EEEEEEEE
T ss_pred CEEEEEEE
Confidence 99988653
No 143
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.55 E-value=5.5e-15 Score=124.17 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=84.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC---CceEEEEecCCCCCCCCCCCCCc-ceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP---DRCHAFVCDVTSEDWNPPFAPES-LDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~-fD~ 183 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.|++.|++++...+ .++.++++|+.+.. ....+++ ||+
T Consensus 54 ~~~vLDlGcGtG~~~~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~--~~~~~~~~fD~ 128 (201)
T 2ift_A 54 QSECLDGFAGSGSLGFEALSR---QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFL--KQPQNQPHFDV 128 (201)
T ss_dssp TCEEEETTCTTCHHHHHHHHT---TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHT--TSCCSSCCEEE
T ss_pred CCeEEEcCCccCHHHHHHHHc---cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHH--HhhccCCCCCE
Confidence 679999999999999987763 23489999999999999999987654 47999999987421 1123578 999
Q ss_pred EEehhhhhccChhHHHHHHHHH--HHhcCCCEEEEEEeCC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQV--YKYLKPGGMVLFRDYG 221 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~ 221 (352)
|++...++ . .+...+++.+ .++|+|||.+++....
T Consensus 129 I~~~~~~~-~--~~~~~~l~~~~~~~~LkpgG~l~i~~~~ 165 (201)
T 2ift_A 129 VFLDPPFH-F--NLAEQAISLLCENNWLKPNALIYVETEK 165 (201)
T ss_dssp EEECCCSS-S--CHHHHHHHHHHHTTCEEEEEEEEEEEES
T ss_pred EEECCCCC-C--ccHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 99977643 3 5677888888 6689999999997654
No 144
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.55 E-value=8.7e-15 Score=125.81 Aligned_cols=103 Identities=17% Similarity=0.251 Sum_probs=86.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCC-CCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP-FAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~-~~~~~fD~V 184 (352)
+.+|||+|||+|..+..+++.. ++.+|+|+|+|+.+++.|++++...+ .++.++++|+.+. ++ ..+++||+|
T Consensus 72 ~~~vLDiG~G~G~~~~~la~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~fD~V 146 (232)
T 3ntv_A 72 VKNILEIGTAIGYSSMQFASIS--DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQ---FENVNDKVYDMI 146 (232)
T ss_dssp CCEEEEECCSSSHHHHHHHTTC--TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC---HHHHTTSCEEEE
T ss_pred CCEEEEEeCchhHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhhccCCccEE
Confidence 7899999999999999999865 67899999999999999999887644 4799999999752 22 226789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++... ......+++.+.++|+|||+|++.+.
T Consensus 147 ~~~~~-----~~~~~~~l~~~~~~LkpgG~lv~d~~ 177 (232)
T 3ntv_A 147 FIDAA-----KAQSKKFFEIYTPLLKHQGLVITDNV 177 (232)
T ss_dssp EEETT-----SSSHHHHHHHHGGGEEEEEEEEEECT
T ss_pred EEcCc-----HHHHHHHHHHHHHhcCCCeEEEEeeC
Confidence 97643 25567899999999999999999654
No 145
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.55 E-value=1.1e-14 Score=125.09 Aligned_cols=98 Identities=21% Similarity=0.222 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..++.. +.+|+|+|+|+.+++.|+++....+ ++.+..+|+... ++ .+++||+|++
T Consensus 70 ~~~~vLdiG~G~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~---~~-~~~~fD~v~~ 140 (231)
T 1vbf_A 70 KGQKVLEIGTGIGYYTALIAEI----VDKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLG---YE-EEKPYDRVVV 140 (231)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGC---CG-GGCCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHH----cCEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccc---cc-cCCCccEEEE
Confidence 4789999999999999999985 3689999999999999999876554 799999998752 22 3578999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
..+++++. ..+.++|+|||++++....
T Consensus 141 ~~~~~~~~--------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 141 WATAPTLL--------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SSBBSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred CCcHHHHH--------HHHHHHcCCCcEEEEEEcC
Confidence 99999884 2588999999999998654
No 146
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.55 E-value=1.3e-14 Score=132.31 Aligned_cols=103 Identities=17% Similarity=0.235 Sum_probs=84.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|+++....+ .+++++++|+.+ +++++++||+|+
T Consensus 67 ~~~VLDvGcG~G~~~~~la~~---g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~~~~fD~Ii 138 (349)
T 3q7e_A 67 DKVVLDVGSGTGILCMFAAKA---GARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEE----VELPVEKVDIII 138 (349)
T ss_dssp TCEEEEESCTTSHHHHHHHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTT----CCCSSSCEEEEE
T ss_pred CCEEEEEeccchHHHHHHHHC---CCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHH----ccCCCCceEEEE
Confidence 789999999999999999985 345999999995 9999999876543 459999999984 455678999999
Q ss_pred ehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAI-NPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+..+.+++ ....+..++..+.++|||||+++..
T Consensus 139 s~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~ 172 (349)
T 3q7e_A 139 SEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPD 172 (349)
T ss_dssp ECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred EccccccccCchhHHHHHHHHHHhCCCCCEEccc
Confidence 97654444 3467889999999999999998753
No 147
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.54 E-value=1.4e-14 Score=122.38 Aligned_cols=99 Identities=14% Similarity=0.101 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.+++.|+++....+ .++.+..+|+.+. ...+++||+|+
T Consensus 77 ~~~~vLdiG~G~G~~~~~la~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~----~~~~~~~D~i~ 148 (210)
T 3lbf_A 77 PQSRVLEIGTGSGYQTAILAHL----VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQG----WQARAPFDAII 148 (210)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC----CGGGCCEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccC----CccCCCccEEE
Confidence 4789999999999999999984 5699999999999999999876533 5799999998752 22367899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+..+++++.. .+.++|+|||++++....
T Consensus 149 ~~~~~~~~~~--------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 149 VTAAPPEIPT--------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp ESSBCSSCCT--------HHHHTEEEEEEEEEEECS
T ss_pred EccchhhhhH--------HHHHhcccCcEEEEEEcC
Confidence 9999998842 578999999999997654
No 148
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.54 E-value=6.5e-14 Score=118.43 Aligned_cols=124 Identities=8% Similarity=0.108 Sum_probs=100.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCC-cceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPE-SLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~-~fD~V 184 (352)
+.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++...+ .++++..+|..+. + +.+ +||+|
T Consensus 16 g~~VlDIGtGsG~l~i~la~~~--~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~---l--~~~~~~D~I 88 (225)
T 3kr9_A 16 GAILLDVGSDHAYLPIELVERG--QIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAA---F--EETDQVSVI 88 (225)
T ss_dssp TEEEEEETCSTTHHHHHHHHTT--SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG---C--CGGGCCCEE
T ss_pred CCEEEEeCCCcHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhh---c--ccCcCCCEE
Confidence 6799999999999999999865 67799999999999999999987654 4699999998642 2 223 69998
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
+...+ ..+-...++......|+|+|+|+++-. ...+.++.++.+.
T Consensus 89 viaG~----Gg~~i~~Il~~~~~~L~~~~~lVlq~~-------------------------------~~~~~vr~~L~~~ 133 (225)
T 3kr9_A 89 TIAGM----GGRLIARILEEGLGKLANVERLILQPN-------------------------------NREDDLRIWLQDH 133 (225)
T ss_dssp EEEEE----CHHHHHHHHHHTGGGCTTCCEEEEEES-------------------------------SCHHHHHHHHHHT
T ss_pred EEcCC----ChHHHHHHHHHHHHHhCCCCEEEEECC-------------------------------CCHHHHHHHHHHC
Confidence 87543 224567899999999999999999632 2467789999999
Q ss_pred CCceEEeee
Q psy11741 265 GFVEKQNLI 273 (352)
Q Consensus 265 Gf~~~~~~~ 273 (352)
||.+++...
T Consensus 134 Gf~i~~e~l 142 (225)
T 3kr9_A 134 GFQIVAESI 142 (225)
T ss_dssp TEEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999988653
No 149
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.54 E-value=9.3e-15 Score=132.77 Aligned_cols=109 Identities=13% Similarity=0.226 Sum_probs=85.9
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccc-------c---CCCceEEEEecCCCCCCCC
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEE-------Y---KPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~-------~---~~~~v~~~~~d~~~~~~~~ 174 (352)
..++.+|||||||+|.+++.++... +..+++|||+|+.|++.|+++.. . ...++.++++|+.+ +
T Consensus 171 l~~gd~VLDLGCGtG~l~l~lA~~~--g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~----l 244 (438)
T 3uwp_A 171 MTDDDLFVDLGSGVGQVVLQVAAAT--NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLS----E 244 (438)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHC--CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTS----H
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccC----C
Confidence 4458899999999999999998764 34469999999999999987532 1 12579999999984 3
Q ss_pred CCCC--CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 175 PFAP--ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 175 ~~~~--~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
++.+ ..||+|+++..+ +. ++....|.+++++|||||+|++.+...
T Consensus 245 p~~d~~~~aDVVf~Nn~~-F~--pdl~~aL~Ei~RvLKPGGrIVssE~f~ 291 (438)
T 3uwp_A 245 EWRERIANTSVIFVNNFA-FG--PEVDHQLKERFANMKEGGRIVSSKPFA 291 (438)
T ss_dssp HHHHHHHTCSEEEECCTT-CC--HHHHHHHHHHHTTSCTTCEEEESSCSS
T ss_pred ccccccCCccEEEEcccc-cC--chHHHHHHHHHHcCCCCcEEEEeeccc
Confidence 3322 479999997665 33 688888999999999999999976443
No 150
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.54 E-value=1.7e-14 Score=125.71 Aligned_cols=124 Identities=19% Similarity=0.252 Sum_probs=99.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++.+. ++.+++|+|+|+.+++.|++++...+ .++.+..+|+.+. +++++||+|
T Consensus 93 ~~~~vldiG~G~G~~~~~l~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~D~v 166 (255)
T 3mb5_A 93 PGDFIVEAGVGSGALTLFLANIVG-PEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-----IEEENVDHV 166 (255)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-----CCCCSEEEE
T ss_pred CCCEEEEecCCchHHHHHHHHHhC-CCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-----cCCCCcCEE
Confidence 478999999999999999999743 67899999999999999999876533 3499999999742 346789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++. . .+...+++++.++|+|||.+++..... ....++...+++.
T Consensus 167 ~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~~~~-----------------------------~~~~~~~~~l~~~ 210 (255)
T 3mb5_A 167 ILD-----L--PQPERVVEHAAKALKPGGFFVAYTPCS-----------------------------NQVMRLHEKLREF 210 (255)
T ss_dssp EEC-----S--SCGGGGHHHHHHHEEEEEEEEEEESSH-----------------------------HHHHHHHHHHHHT
T ss_pred EEC-----C--CCHHHHHHHHHHHcCCCCEEEEEECCH-----------------------------HHHHHHHHHHHHc
Confidence 972 2 455678999999999999999975431 1355678888999
Q ss_pred C--CceEEee
Q psy11741 265 G--FVEKQNL 272 (352)
Q Consensus 265 G--f~~~~~~ 272 (352)
| |..++..
T Consensus 211 g~~f~~~~~~ 220 (255)
T 3mb5_A 211 KDYFMKPRTI 220 (255)
T ss_dssp GGGBSCCEEE
T ss_pred CCCccccEEE
Confidence 9 9877653
No 151
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.53 E-value=3.5e-14 Score=122.11 Aligned_cols=107 Identities=15% Similarity=0.243 Sum_probs=83.2
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+|||+|.++..+++..+ ++.+|+|+|+|+.|++.+.+++... .++.+..+|+.+.. .++..+++||+|+
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g-~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~-~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVG-PDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPH-KYRMLIAMVDVIF 152 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGG-GGGGGCCCEEEEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChh-hhcccCCcEEEEE
Confidence 3478999999999999999998753 4569999999998877776665443 67999999987521 1334467899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+... .++....++.++.++|||||++++..
T Consensus 153 ~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 153 ADVA----QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ECCC----CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcCC----CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 8543 33555677899999999999999953
No 152
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.53 E-value=3.6e-14 Score=130.22 Aligned_cols=107 Identities=21% Similarity=0.237 Sum_probs=87.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC----CceEEEEecCCCCCCCCCCCCCcce
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP----DRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
++.+|||+|||+|.++..+++.. ++.+|+|+|+|+.|++.|++++...+ .++.+..+|+.+ ++++++||
T Consensus 222 ~~~~VLDlGcG~G~~s~~la~~~--p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-----~~~~~~fD 294 (375)
T 4dcm_A 222 LEGEIVDLGCGNGVIGLTLLDKN--PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS-----GVEPFRFN 294 (375)
T ss_dssp CCSEEEEETCTTCHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-----TCCTTCEE
T ss_pred CCCeEEEEeCcchHHHHHHHHHC--CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-----cCCCCCee
Confidence 35899999999999999999976 78899999999999999999876533 258889999875 23467999
Q ss_pred EEEehhhhhcc---ChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 183 IVLLIFVLDAI---NPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 183 ~V~~~~~l~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|+++..+|+. .......+++++.++|+|||.+++...
T Consensus 295 ~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 295 AVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp EEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 99998877652 334456789999999999999999653
No 153
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.53 E-value=6.1e-14 Score=119.75 Aligned_cols=124 Identities=6% Similarity=0.068 Sum_probs=100.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|.++..+++.. +..+|+|+|+++.+++.|++++...+ .++.+.++|..+. + .++.+||+|+
T Consensus 22 g~~VlDIGtGsG~l~i~la~~~--~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~---~-~~~~~~D~Iv 95 (244)
T 3gnl_A 22 NERIADIGSDHAYLPCFAVKNQ--TASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAV---I-EKKDAIDTIV 95 (244)
T ss_dssp SEEEEEETCSTTHHHHHHHHTT--SEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGG---C-CGGGCCCEEE
T ss_pred CCEEEEECCccHHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhc---c-CccccccEEE
Confidence 7799999999999999999864 56789999999999999999987654 4699999998753 1 1223599988
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAG 265 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G 265 (352)
+..+ ..+-...+|....+.|+++|+|+++-. ...+.++.++.+.|
T Consensus 96 iagm----Gg~lI~~IL~~~~~~L~~~~~lIlq~~-------------------------------~~~~~lr~~L~~~G 140 (244)
T 3gnl_A 96 IAGM----GGTLIRTILEEGAAKLAGVTKLILQPN-------------------------------IAAWQLREWSEQNN 140 (244)
T ss_dssp EEEE----CHHHHHHHHHHTGGGGTTCCEEEEEES-------------------------------SCHHHHHHHHHHHT
T ss_pred EeCC----chHHHHHHHHHHHHHhCCCCEEEEEcC-------------------------------CChHHHHHHHHHCC
Confidence 7443 335567889999999999999999732 24678999999999
Q ss_pred CceEEee
Q psy11741 266 FVEKQNL 272 (352)
Q Consensus 266 f~~~~~~ 272 (352)
|.+++..
T Consensus 141 f~i~~E~ 147 (244)
T 3gnl_A 141 WLITSEA 147 (244)
T ss_dssp EEEEEEE
T ss_pred CEEEEEE
Confidence 9987754
No 154
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.53 E-value=1.1e-14 Score=127.74 Aligned_cols=162 Identities=15% Similarity=0.172 Sum_probs=100.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEE-EEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHA-FVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||||.++..+++. ...+|+|+|+|+.|++.+.++. +++.. ...|+.... ...++..+||+|+
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~---ga~~V~aVDvs~~mL~~a~r~~----~rv~~~~~~ni~~l~-~~~l~~~~fD~v~ 156 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN---GAKLVYAVDVGTNQLVWKLRQD----DRVRSMEQYNFRYAE-PVDFTEGLPSFAS 156 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCSEEEEECSSSSCSCHHHHTC----TTEEEECSCCGGGCC-GGGCTTCCCSEEE
T ss_pred cccEEEecCCCccHHHHHHHhC---CCCEEEEEECCHHHHHHHHHhC----cccceecccCceecc-hhhCCCCCCCEEE
Confidence 3779999999999999998884 3358999999999999864431 22222 223433211 1112344699999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCcc-ccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRC-LQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
+..+++++ ..+|.+++++|+|||.+++.... . +..+.. +... ..-.....+....+++..+++++
T Consensus 157 ~d~sf~sl-----~~vL~e~~rvLkpGG~lv~lvkP--q-----fe~~~~~~~~~--G~vrd~~~~~~~~~~v~~~~~~~ 222 (291)
T 3hp7_A 157 IDVSFISL-----NLILPALAKILVDGGQVVALVKP--Q-----FEAGREQIGKN--GIVRESSIHEKVLETVTAFAVDY 222 (291)
T ss_dssp ECCSSSCG-----GGTHHHHHHHSCTTCEEEEEECG--G-----GTSCGGGCC-C--CCCCCHHHHHHHHHHHHHHHHHT
T ss_pred EEeeHhhH-----HHHHHHHHHHcCcCCEEEEEECc--c-----cccChhhcCCC--CccCCHHHHHHHHHHHHHHHHHC
Confidence 98777655 67899999999999999886311 1 111100 0000 00000112346788899999999
Q ss_pred CCceEEeeeeeeeeeecCCccceeeeeEe
Q psy11741 265 GFVEKQNLIDRRLQVNRGKQIKMYRVWIQ 293 (352)
Q Consensus 265 Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (352)
||.+...... ++....+-..|-.|..
T Consensus 223 Gf~v~~~~~s---pi~g~~gn~e~l~~~~ 248 (291)
T 3hp7_A 223 GFSVKGLDFS---PIQGGHGNIEFLAHLE 248 (291)
T ss_dssp TEEEEEEEEC---SSCCGGGCCCEEEEEE
T ss_pred CCEEEEEEEC---CCCCCCcCHHHHHHhh
Confidence 9998876442 2222334444555553
No 155
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.53 E-value=3.2e-14 Score=125.65 Aligned_cols=125 Identities=15% Similarity=0.184 Sum_probs=99.3
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+|||+|||+|.++..+++.+. ++.+++++|+|+.+++.|+++....+ .++.+..+|+.+. +++++||+
T Consensus 111 ~~~~~VLDiG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-----~~~~~~D~ 184 (277)
T 1o54_A 111 KEGDRIIDTGVGSGAMCAVLARAVG-SSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-----FDEKDVDA 184 (277)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHTT-TTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-----CSCCSEEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHhC-CCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-----ccCCccCE
Confidence 3478999999999999999998743 57799999999999999999876544 4799999998752 34578999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
|++. . .+...+++.+.++|+|||.+++.+... ....++...+++
T Consensus 185 V~~~-----~--~~~~~~l~~~~~~L~pgG~l~~~~~~~-----------------------------~~~~~~~~~l~~ 228 (277)
T 1o54_A 185 LFLD-----V--PDPWNYIDKCWEALKGGGRFATVCPTT-----------------------------NQVQETLKKLQE 228 (277)
T ss_dssp EEEC-----C--SCGGGTHHHHHHHEEEEEEEEEEESSH-----------------------------HHHHHHHHHHHH
T ss_pred EEEC-----C--cCHHHHHHHHHHHcCCCCEEEEEeCCH-----------------------------HHHHHHHHHHHH
Confidence 9973 2 455688999999999999999976431 124566777888
Q ss_pred CCCceEEee
Q psy11741 264 AGFVEKQNL 272 (352)
Q Consensus 264 ~Gf~~~~~~ 272 (352)
.||..++..
T Consensus 229 ~gf~~~~~~ 237 (277)
T 1o54_A 229 LPFIRIEVW 237 (277)
T ss_dssp SSEEEEEEE
T ss_pred CCCceeEEE
Confidence 999877654
No 156
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.52 E-value=3.4e-14 Score=125.68 Aligned_cols=136 Identities=13% Similarity=0.089 Sum_probs=95.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-CHHHHHHHHhcc-----ccCC------CceEEEEecCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-SENAVNILKEHE-----EYKP------DRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-s~~~l~~a~~~~-----~~~~------~~v~~~~~d~~~~~~~~~ 175 (352)
+.+|||+|||+|.++..+++. ...+|+|+|+ |+.+++.|++++ ...+ .++.+...|..+....+.
T Consensus 80 ~~~vLDlG~G~G~~~~~~a~~---~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 80 GKTVCELGAGAGLVSIVAFLA---GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TCEEEETTCTTSHHHHHHHHT---TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred CCeEEEecccccHHHHHHHHc---CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 779999999999999988873 2238999999 899999999987 3322 257777666543211111
Q ss_pred --CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcC---C--CEEEEEEeCCCCchhhHhhhcCccccCceeecCCCee
Q psy11741 176 --FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLK---P--GGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTL 248 (352)
Q Consensus 176 --~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lk---p--gG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
+.+++||+|++..++++. .+...+++.+.++|+ | ||.+++....... .
T Consensus 157 ~~~~~~~fD~Ii~~dvl~~~--~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~~~~--~--------------------- 211 (281)
T 3bzb_A 157 RCTGLQRFQVVLLADLLSFH--QAHDALLRSVKMLLALPANDPTAVALVTFTHHRP--H--------------------- 211 (281)
T ss_dssp HHHSCSSBSEEEEESCCSCG--GGHHHHHHHHHHHBCCTTTCTTCEEEEEECC---------------------------
T ss_pred hhccCCCCCEEEEeCcccCh--HHHHHHHHHHHHHhcccCCCCCCEEEEEEEeeec--c---------------------
Confidence 025789999999998887 788999999999999 9 9987774321100 0
Q ss_pred eeccCHHHHHHHHHhCC-CceEEee
Q psy11741 249 VYFFTREEVKTMFESAG-FVEKQNL 272 (352)
Q Consensus 249 ~~~~~~~~~~~ll~~~G-f~~~~~~ 272 (352)
......++...+++.| |.+....
T Consensus 212 -~~~~~~~~~~~l~~~G~f~v~~~~ 235 (281)
T 3bzb_A 212 -LAERDLAFFRLVNADGALIAEPWL 235 (281)
T ss_dssp -----CTHHHHHHHHSTTEEEEEEE
T ss_pred -cchhHHHHHHHHHhcCCEEEEEec
Confidence 0011245667888999 9987763
No 157
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.52 E-value=9.9e-16 Score=148.50 Aligned_cols=107 Identities=15% Similarity=0.242 Sum_probs=84.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||||||+|.++..||+ .|++|+|||+|+.+|+.|+.++...+ .++.+.++++.+.. ....+++||+|+|
T Consensus 67 ~~~vLDvGCG~G~~~~~la~----~ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~--~~~~~~~fD~v~~ 140 (569)
T 4azs_A 67 PLNVLDLGCAQGFFSLSLAS----KGATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVI--AALEEGEFDLAIG 140 (569)
T ss_dssp CCEEEEETCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHH--HHCCTTSCSEEEE
T ss_pred CCeEEEECCCCcHHHHHHHh----CCCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHh--hhccCCCccEEEE
Confidence 67999999999999999999 78899999999999999999887654 68999999987421 1234679999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
..+++|+...+....+..+.+.|+++|..++..+
T Consensus 141 ~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~~~ 174 (569)
T 4azs_A 141 LSVFHHIVHLHGIDEVKRLLSRLADVTQAVILEL 174 (569)
T ss_dssp ESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEEEC
T ss_pred CcchhcCCCHHHHHHHHHHHHHhccccceeeEEe
Confidence 9999999433323345567777888876666544
No 158
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.52 E-value=3.1e-15 Score=128.25 Aligned_cols=141 Identities=19% Similarity=0.180 Sum_probs=86.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC----CCceEEEE-ecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK----PDRCHAFV-CDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~-~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|.++..+++. ...+|+|+|+|+.|++.|+++.... ..++.+.. .|+.. ..+...+||
T Consensus 38 g~~VLDiGcGtG~~t~~la~~---g~~~V~gvDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~----~~~d~~~~D 110 (232)
T 3opn_A 38 GKTCLDIGSSTGGFTDVMLQN---GAKLVYALDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQ----GRPSFTSID 110 (232)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCSEEEEECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCS----CCCSEEEEC
T ss_pred CCEEEEEccCCCHHHHHHHhc---CCCEEEEEcCCHHHHHHHHHhCccccccccceEEEeCHhHcCc----CCCCEEEEE
Confidence 679999999999999999984 2249999999999999987764311 11222222 12110 011223445
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHH
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFE 262 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 262 (352)
++++ ++ ..++++++++|||||.+++.. . +........ +... ........+..+.+++.++++
T Consensus 111 ~v~~-----~l-----~~~l~~i~rvLkpgG~lv~~~-~-p~~e~~~~~----~~~~--G~~~d~~~~~~~~~~l~~~l~ 172 (232)
T 3opn_A 111 VSFI-----SL-----DLILPPLYEILEKNGEVAALI-K-PQFEAGREQ----VGKN--GIIRDPKVHQMTIEKVLKTAT 172 (232)
T ss_dssp CSSS-----CG-----GGTHHHHHHHSCTTCEEEEEE-C-HHHHSCHHH----HC-C--CCCCCHHHHHHHHHHHHHHHH
T ss_pred EEhh-----hH-----HHHHHHHHHhccCCCEEEEEE-C-cccccCHHH----hCcC--CeecCcchhHHHHHHHHHHHH
Confidence 4443 22 568999999999999999854 1 111100000 0000 000011223457889999999
Q ss_pred hCCCceEEeee
Q psy11741 263 SAGFVEKQNLI 273 (352)
Q Consensus 263 ~~Gf~~~~~~~ 273 (352)
++||.++....
T Consensus 173 ~aGf~v~~~~~ 183 (232)
T 3opn_A 173 QLGFSVKGLTF 183 (232)
T ss_dssp HHTEEEEEEEE
T ss_pred HCCCEEEEEEE
Confidence 99999887654
No 159
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.52 E-value=6.4e-14 Score=119.89 Aligned_cols=106 Identities=18% Similarity=0.266 Sum_probs=83.1
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+|||+|.++..+++.++ ++.+|+|+|+|+.|++.+++++... .++.+.++|+.......+. .++||+|+
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~-~~~~D~v~ 148 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVG-WEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRAL-VPKVDVIF 148 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTT-CCCEEEEE
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhC-CCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcc-cCCceEEE
Confidence 3478999999999999999998753 4569999999999999998887654 6899999998752110122 35899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+... .+.....++.++.++|||||.+++.
T Consensus 149 ~~~~----~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 149 EDVA----QPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp ECCC----STTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCC----CHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 7543 2244455699999999999999986
No 160
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.52 E-value=5.1e-14 Score=115.59 Aligned_cols=116 Identities=12% Similarity=0.130 Sum_probs=89.7
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC---CCCcc
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF---APESL 181 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~~f 181 (352)
..++.+|||+|||. +++|+|+.|++.|+++.. .++.+.++|+.+ +++ ++++|
T Consensus 10 ~~~g~~vL~~~~g~------------------v~vD~s~~ml~~a~~~~~---~~~~~~~~d~~~----~~~~~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS------------------SPVEALKGLVDKLQALTG---NEGRVSVENIKQ----LLQSAHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT------------------SCHHHHHHHHHHHHHHTT---TTSEEEEEEGGG----GGGGCCCSSCE
T ss_pred CCCCCEEEEecCCc------------------eeeeCCHHHHHHHHHhcc---cCcEEEEechhc----CccccCCCCCE
Confidence 44588999999986 128999999999998864 248999999984 333 67899
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHH
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMF 261 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 261 (352)
|+|++..++||+. .+...++++++++|||||++++....... .+...+..+.+++.+++
T Consensus 65 D~V~~~~~l~~~~-~~~~~~l~~~~r~LkpgG~l~~~~~~~~~--------------------~~~~~~~~~~~~~~~~l 123 (176)
T 2ld4_A 65 DIILSGLVPGSTT-LHSAEILAEIARILRPGGCLFLKEPVETA--------------------VDNNSKVKTASKLCSAL 123 (176)
T ss_dssp EEEEECCSTTCCC-CCCHHHHHHHHHHEEEEEEEEEEEEEESS--------------------SCSSSSSCCHHHHHHHH
T ss_pred eEEEECChhhhcc-cCHHHHHHHHHHHCCCCEEEEEEcccccc--------------------cccccccCCHHHHHHHH
Confidence 9999999999982 34588999999999999999995321100 00012235789999999
Q ss_pred HhCCC
Q psy11741 262 ESAGF 266 (352)
Q Consensus 262 ~~~Gf 266 (352)
+++||
T Consensus 124 ~~aGf 128 (176)
T 2ld4_A 124 TLSGL 128 (176)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 99999
No 161
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.51 E-value=1.5e-14 Score=131.68 Aligned_cols=106 Identities=20% Similarity=0.297 Sum_probs=89.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++.. +..+|+|+|+|+.|++.|+++....+..+.+..+|+... .+++||+|+++
T Consensus 197 ~~~VLDlGcG~G~~~~~la~~~--~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~------~~~~fD~Iv~~ 268 (343)
T 2pjd_A 197 KGKVLDVGCGAGVLSVAFARHS--PKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSE------VKGRFDMIISN 268 (343)
T ss_dssp CSBCCBTTCTTSHHHHHHHHHC--TTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTT------CCSCEEEEEEC
T ss_pred CCeEEEecCccCHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEcccccc------ccCCeeEEEEC
Confidence 6799999999999999999876 667999999999999999999876655677888887641 25789999999
Q ss_pred hhhhcc---ChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 188 FVLDAI---NPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 188 ~~l~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
..+|+. +..+...+++++.++|+|||.+++....
T Consensus 269 ~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 305 (343)
T 2pjd_A 269 PPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVANA 305 (343)
T ss_dssp CCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEEET
T ss_pred CCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEEcC
Confidence 888752 3467889999999999999999997543
No 162
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.51 E-value=3.1e-14 Score=123.58 Aligned_cols=107 Identities=14% Similarity=0.128 Sum_probs=85.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||||||+|..+..+++.++ ++.+|+|+|+|+.+++.|++++...+ .++.+.++|+.+....+ ...++||+|+
T Consensus 64 ~~~VLdiG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~-~~~~~fD~V~ 141 (248)
T 3tfw_A 64 AKRILEIGTLGGYSTIWMARELP-ADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESL-GECPAFDLIF 141 (248)
T ss_dssp CSEEEEECCTTSHHHHHHHTTSC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTC-CSCCCCSEEE
T ss_pred CCEEEEecCCchHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhc-CCCCCeEEEE
Confidence 78999999999999999999763 27899999999999999999986543 47999999986421111 1135899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+... ......+++.+.++|||||+|++.+..
T Consensus 142 ~d~~-----~~~~~~~l~~~~~~LkpGG~lv~~~~~ 172 (248)
T 3tfw_A 142 IDAD-----KPNNPHYLRWALRYSRPGTLIIGDNVV 172 (248)
T ss_dssp ECSC-----GGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred ECCc-----hHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence 8542 356678999999999999999997543
No 163
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.51 E-value=1.8e-14 Score=130.49 Aligned_cols=98 Identities=19% Similarity=0.288 Sum_probs=79.2
Q ss_pred CCeEEEEcCC------ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC----
Q psy11741 108 TKNILEIGCG------VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA---- 177 (352)
Q Consensus 108 ~~~vLD~GcG------~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~---- 177 (352)
+.+||||||| +|..+..+++.+. ++.+|+|+|+|+.|. ....+++++++|+.+ +++.
T Consensus 217 ~~rVLDIGCG~~~~~~TGG~Sl~la~~~f-P~a~V~GVDiSp~m~--------~~~~rI~fv~GDa~d----lpf~~~l~ 283 (419)
T 3sso_A 217 QVRVLEIGVGGYKHPEWGGGSLRMWKSFF-PRGQIYGLDIMDKSH--------VDELRIRTIQGDQND----AEFLDRIA 283 (419)
T ss_dssp CCEEEEECCSCTTCSSCCCHHHHHHHHHC-TTCEEEEEESSCCGG--------GCBTTEEEEECCTTC----HHHHHHHH
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHHHhC-CCCEEEEEECCHHHh--------hcCCCcEEEEecccc----cchhhhhh
Confidence 6899999999 7777777776543 678999999999973 123679999999973 4444
Q ss_pred --CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 178 --PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 178 --~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+++||+|++.. .|++ .+...+|++++++|||||++++.+..
T Consensus 284 ~~d~sFDlVisdg-sH~~--~d~~~aL~el~rvLKPGGvlVi~Dl~ 326 (419)
T 3sso_A 284 RRYGPFDIVIDDG-SHIN--AHVRTSFAALFPHVRPGGLYVIEDMW 326 (419)
T ss_dssp HHHCCEEEEEECS-CCCH--HHHHHHHHHHGGGEEEEEEEEEECGG
T ss_pred cccCCccEEEECC-cccc--hhHHHHHHHHHHhcCCCeEEEEEecc
Confidence 57999999864 3555 78899999999999999999998754
No 164
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.51 E-value=6.6e-14 Score=127.11 Aligned_cols=104 Identities=17% Similarity=0.235 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC------------CCceEEEEecCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK------------PDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~------------~~~v~~~~~d~~~~~~~~ 174 (352)
++.+|||+|||+|.++..+++..+ +..+|+|+|+++.+++.|+++.... ..++.+..+|+.+.. .
T Consensus 105 ~g~~VLDiG~G~G~~~~~la~~~g-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~--~ 181 (336)
T 2b25_A 105 PGDTVLEAGSGSGGMSLFLSKAVG-SQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT--E 181 (336)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC---
T ss_pred CCCEEEEeCCCcCHHHHHHHHHhC-CCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc--c
Confidence 478999999999999999998643 5579999999999999999987631 257999999997531 1
Q ss_pred CCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 175 PFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 175 ~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++++++||+|++... ....++.++.++|+|||.+++...
T Consensus 182 ~~~~~~fD~V~~~~~-------~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 182 DIKSLTFDAVALDML-------NPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp ------EEEEEECSS-------STTTTHHHHGGGEEEEEEEEEEES
T ss_pred ccCCCCeeEEEECCC-------CHHHHHHHHHHhcCCCcEEEEEeC
Confidence 345678999998432 223378999999999999998754
No 165
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.51 E-value=1.8e-14 Score=121.11 Aligned_cols=105 Identities=10% Similarity=0.020 Sum_probs=82.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.|++.|++++...+ .+++++++|+.+. ++..+++||+|++
T Consensus 55 ~~~vLDlgcG~G~~~~~l~~~---~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~---~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 55 DAQCLDCFAGSGALGLEALSR---YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSF---LAQKGTPHNIVFV 128 (202)
T ss_dssp TCEEEETTCTTCHHHHHHHHT---TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHH---HSSCCCCEEEEEE
T ss_pred CCeEEEeCCCcCHHHHHHHhc---CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHH---HhhcCCCCCEEEE
Confidence 679999999999999987774 22489999999999999999887644 4799999998641 2334678999998
Q ss_pred hhhhhccChhHHHHHHHHHHH--hcCCCEEEEEEeCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYK--YLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~--~LkpgG~l~~~~~~ 221 (352)
...++ . .....+++.+.+ +|+|||++++....
T Consensus 129 ~~p~~-~--~~~~~~l~~l~~~~~L~pgG~l~i~~~~ 162 (202)
T 2fpo_A 129 DPPFR-R--GLLEETINLLEDNGWLADEALIYVESEV 162 (202)
T ss_dssp CCSSS-T--TTHHHHHHHHHHTTCEEEEEEEEEEEEG
T ss_pred CCCCC-C--CcHHHHHHHHHhcCccCCCcEEEEEECC
Confidence 76633 3 456677888866 59999999987543
No 166
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.51 E-value=1.5e-14 Score=123.27 Aligned_cols=105 Identities=15% Similarity=0.163 Sum_probs=84.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC---CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP---DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||||||+|..+..+++.++ ++.+|+++|+|+.+++.|++++...+ .+++++++|+.+... .+.+++||+|
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~--~~~~~~fD~V 133 (221)
T 3dr5_A 57 STGAIAITPAAGLVGLYILNGLA-DNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMS--RLANDSYQLV 133 (221)
T ss_dssp CCEEEEESTTHHHHHHHHHHHSC-TTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGG--GSCTTCEEEE
T ss_pred CCCEEEEcCCchHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHH--HhcCCCcCeE
Confidence 44999999999999999999764 47899999999999999999987643 469999999865211 1236799999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++... ..+...+++.+.++|+|||++++.+.
T Consensus 134 ~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~dn~ 164 (221)
T 3dr5_A 134 FGQVS-----PMDLKALVDAAWPLLRRGGALVLADA 164 (221)
T ss_dssp EECCC-----TTTHHHHHHHHHHHEEEEEEEEETTT
T ss_pred EEcCc-----HHHHHHHHHHHHHHcCCCcEEEEeCC
Confidence 98643 24566789999999999999999643
No 167
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.51 E-value=4.6e-14 Score=128.64 Aligned_cols=103 Identities=22% Similarity=0.300 Sum_probs=85.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|+++.+..+ .+++++.+|+.+. ++ +++||+|
T Consensus 50 ~~~~VLDiGcGtG~ls~~la~~---g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~----~~-~~~~D~I 120 (348)
T 2y1w_A 50 KDKIVLDVGCGSGILSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SL-PEQVDII 120 (348)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT---TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CC-SSCEEEE
T ss_pred CcCEEEEcCCCccHHHHHHHhC---CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhC----CC-CCceeEE
Confidence 3789999999999999998884 345999999996 8899988876543 6799999999742 33 3689999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
++..+++|+..+.....+..++++|||||.+++.
T Consensus 121 vs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 121 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 9998888886667778888999999999999864
No 168
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.51 E-value=1.2e-14 Score=119.38 Aligned_cols=106 Identities=13% Similarity=0.120 Sum_probs=83.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++. +..+|+|+|+|+.|++.|++++...+ .++.+..+|+.+. ++..+++||+|+
T Consensus 32 ~~~vLDlGcG~G~~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---~~~~~~~fD~i~ 105 (177)
T 2esr_A 32 GGRVLDLFAGSGGLAIEAVSR---GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERA---IDCLTGRFDLVF 105 (177)
T ss_dssp SCEEEEETCTTCHHHHHHHHT---TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHH---HHHBCSCEEEEE
T ss_pred CCeEEEeCCCCCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHh---HHhhcCCCCEEE
Confidence 779999999999999999884 34699999999999999999886544 4689999998641 222246799999
Q ss_pred ehhhhhccChhHHHHHHHHHH--HhcCCCEEEEEEeCCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVY--KYLKPGGMVLFRDYGR 222 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 222 (352)
+...++. .....+++.+. ++|+|||++++.....
T Consensus 106 ~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 141 (177)
T 2esr_A 106 LDPPYAK---ETIVATIEALAAKNLLSEQVMVVCETDKT 141 (177)
T ss_dssp ECCSSHH---HHHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECCCCCc---chHHHHHHHHHhCCCcCCCcEEEEEECCc
Confidence 9765432 34566677776 9999999999976543
No 169
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.51 E-value=7.7e-15 Score=119.66 Aligned_cols=107 Identities=11% Similarity=0.095 Sum_probs=79.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++. +.+++|+|+|+.+++.|+++....+.++.+.++|+.+.....+...++||+|++.
T Consensus 42 ~~~vLD~GcG~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~ 117 (171)
T 1ws6_A 42 RGRFLDPFAGSGAVGLEAASE----GWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMA 117 (171)
T ss_dssp CCEEEEETCSSCHHHHHHHHT----TCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCeEEEeCCCcCHHHHHHHHC----CCeEEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEEC
Confidence 779999999999999999984 4459999999999999999876544478999999864210011113479999998
Q ss_pred hhhhccChhHHHHHHHHHH--HhcCCCEEEEEEeCCC
Q psy11741 188 FVLDAINPNKMQHVINQVY--KYLKPGGMVLFRDYGR 222 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~--~~LkpgG~l~~~~~~~ 222 (352)
..++ - ....+++.+. ++|+|||.+++.....
T Consensus 118 ~~~~-~---~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 118 PPYA-M---DLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp CCTT-S---CTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred CCCc-h---hHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 7654 2 2233444454 9999999999986554
No 170
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.51 E-value=3.5e-14 Score=125.90 Aligned_cols=107 Identities=14% Similarity=0.191 Sum_probs=81.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc------CCCceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY------KPDRCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+.+|||||||+|..+..+++.. +..+|+++|+|+.+++.|++++.. ..++++++.+|+... +...+++|
T Consensus 84 ~~~VLdiG~G~G~~~~~l~~~~--~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~~~~f 158 (294)
T 3adn_A 84 AKHVLIIGGGDGAMLREVTRHK--NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQTSQTF 158 (294)
T ss_dssp CCEEEEESCTTCHHHHHHHTCT--TCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC------CCCCCE
T ss_pred CCEEEEEeCChhHHHHHHHhCC--CCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHH---HhhcCCCc
Confidence 6799999999999999999864 567899999999999999998753 246899999998753 23346789
Q ss_pred eEEEehhhhhccChhHH--HHHHHHHHHhcCCCEEEEEEe
Q psy11741 182 DIVLLIFVLDAINPNKM--QHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~ 219 (352)
|+|++...........+ ..+++.++++|+|||++++..
T Consensus 159 DvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 99999554332222222 679999999999999999974
No 171
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.51 E-value=9.5e-14 Score=124.70 Aligned_cols=135 Identities=10% Similarity=0.077 Sum_probs=99.0
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
.++.+|||+|||+|..+..+++.+. ++.+|+|+|+|+.+++.+++++...+ .++.+.++|+... +..+++||+|
T Consensus 117 ~~g~~VLDlg~G~G~~t~~la~~~~-~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~----~~~~~~fD~I 191 (315)
T 1ixk_A 117 KPGEIVADMAAAPGGKTSYLAQLMR-NDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHI----GELNVEFDKI 191 (315)
T ss_dssp CTTCEEEECCSSCSHHHHHHHHHTT-TCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGG----GGGCCCEEEE
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhC-CCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhc----ccccccCCEE
Confidence 3478999999999999999998763 45789999999999999999986543 4799999998742 2235689999
Q ss_pred Eehh------hhhcc-------Ch-------hHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecC
Q psy11741 185 LLIF------VLDAI-------NP-------NKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARG 244 (352)
Q Consensus 185 ~~~~------~l~~~-------~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (352)
++.. ++.+. ++ ..+..+|+++.++|||||++++.+......
T Consensus 192 l~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~~~------------------- 252 (315)
T 1ixk_A 192 LLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLEPE------------------- 252 (315)
T ss_dssp EEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCCGG-------------------
T ss_pred EEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCChH-------------------
Confidence 9832 22211 11 123689999999999999999987653211
Q ss_pred CCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 245 DGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 245 ~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
-+.+.+..++++.||..+..
T Consensus 253 -------Ene~~v~~~l~~~~~~~~~~ 272 (315)
T 1ixk_A 253 -------ENEFVIQWALDNFDVELLPL 272 (315)
T ss_dssp -------GTHHHHHHHHHHSSEEEECC
T ss_pred -------HhHHHHHHHHhcCCCEEecC
Confidence 23445677788888776543
No 172
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.51 E-value=4e-14 Score=120.08 Aligned_cols=102 Identities=19% Similarity=0.135 Sum_probs=83.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++... +..+|+|+|+|+.+++.|+++....+ .++.+..+|+.. ..+ .+++||+|+
T Consensus 77 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~-~~~~fD~v~ 151 (215)
T 2yxe_A 77 PGMKVLEIGTGCGYHAAVTAEIVG-EDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTL---GYE-PLAPYDRIY 151 (215)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGG---CCG-GGCCEEEEE
T ss_pred CCCEEEEECCCccHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCccc---CCC-CCCCeeEEE
Confidence 478999999999999999998753 34699999999999999998875432 468999999853 222 256899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+..+++++. .++.++|+|||.+++....
T Consensus 152 ~~~~~~~~~--------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 152 TTAAGPKIP--------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp ESSBBSSCC--------HHHHHTEEEEEEEEEEESS
T ss_pred ECCchHHHH--------HHHHHHcCCCcEEEEEECC
Confidence 999999884 3788999999999997644
No 173
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.50 E-value=3.3e-14 Score=130.84 Aligned_cols=104 Identities=15% Similarity=0.228 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++. ...+|+|+|+| .|++.|+++....+ .+++++++|+.+ ++++ ++||+|
T Consensus 63 ~~~~VLDlGcGtG~ls~~la~~---g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~----~~~~-~~~D~I 133 (376)
T 3r0q_C 63 EGKTVLDVGTGSGILAIWSAQA---GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVED----ISLP-EKVDVI 133 (376)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT---TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGG----CCCS-SCEEEE
T ss_pred CCCEEEEeccCcCHHHHHHHhc---CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhh----cCcC-CcceEE
Confidence 4789999999999999999984 22399999999 99999999876543 559999999975 3333 789999
Q ss_pred EehhhhhccC-hhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 185 LLIFVLDAIN-PNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 185 ~~~~~l~~~~-~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
++..+.+++. ...+..+++.+.++|||||++++..
T Consensus 134 v~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 134 ISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp EECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSE
T ss_pred EEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEec
Confidence 9976656553 3568889999999999999998754
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.50 E-value=5.5e-14 Score=124.26 Aligned_cols=103 Identities=17% Similarity=0.242 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC----CCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK----PDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~----~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
++.+|||+|||+|.++..+++... ++.+++++|+|+.+++.|+++.... ..++.+..+|+.+ .++++++||
T Consensus 99 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~----~~~~~~~~D 173 (280)
T 1i9g_A 99 PGARVLEAGAGSGALTLSLLRAVG-PAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLAD----SELPDGSVD 173 (280)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGG----CCCCTTCEE
T ss_pred CCCEEEEEcccccHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHh----cCCCCCcee
Confidence 478999999999999999998643 5679999999999999999987543 3679999999974 334567899
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+|++. + .+...+++++.++|+|||.+++....
T Consensus 174 ~v~~~-----~--~~~~~~l~~~~~~L~pgG~l~~~~~~ 205 (280)
T 1i9g_A 174 RAVLD-----M--LAPWEVLDAVSRLLVAGGVLMVYVAT 205 (280)
T ss_dssp EEEEE-----S--SCGGGGHHHHHHHEEEEEEEEEEESS
T ss_pred EEEEC-----C--cCHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 99982 3 34457899999999999999997654
No 175
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.50 E-value=7.9e-14 Score=120.91 Aligned_cols=108 Identities=16% Similarity=0.257 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc---------CCCceEEEEecCCCCCCCCC--
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY---------KPDRCHAFVCDVTSEDWNPP-- 175 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~---------~~~~v~~~~~d~~~~~~~~~-- 175 (352)
++.+|||||||+|.++..++... ++.+|+|+|+|+.+++.|++++.. ...++.++++|+.+. ++
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~---l~~~ 123 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAF--PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKF---LPNF 123 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHS--TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSC---GGGT
T ss_pred CCCEEEEEcCCCCHHHHHHHHhC--CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHH---HHHh
Confidence 36799999999999999999976 677999999999999999887653 225799999998752 33
Q ss_pred CCCCcceEEEehhhhhccChh------HHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 176 FAPESLDIVLLIFVLDAINPN------KMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 176 ~~~~~fD~V~~~~~l~~~~~~------~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
++.+++|.|++...-.+.... ....+++++.++|+|||.|++.+
T Consensus 124 ~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 124 FEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp SCTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEEe
Confidence 557889999854321111000 01479999999999999999964
No 176
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.50 E-value=3.1e-14 Score=131.84 Aligned_cols=109 Identities=15% Similarity=0.274 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHH-------HhccccCC---CceEEEEecCCCCCCCCC
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNIL-------KEHEEYKP---DRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a-------~~~~~~~~---~~v~~~~~d~~~~~~~~~ 175 (352)
.++.+|||||||+|.++..+++.. +..+|+|+|+|+.+++.| ++++...+ .++.++++|.....+.++
T Consensus 241 ~~g~~VLDLGCGsG~la~~LA~~~--g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~ 318 (433)
T 1u2z_A 241 KKGDTFMDLGSGVGNCVVQAALEC--GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVA 318 (433)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHH
T ss_pred CCCCEEEEeCCCcCHHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccc
Confidence 357899999999999999999875 445899999999999988 77765543 578998876442100011
Q ss_pred CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 176 FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 176 ~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
...++||+|+++.++ +. +++..+|+++.++|||||.+++.+
T Consensus 319 ~~~~~FDvIvvn~~l-~~--~d~~~~L~el~r~LKpGG~lVi~d 359 (433)
T 1u2z_A 319 ELIPQCDVILVNNFL-FD--EDLNKKVEKILQTAKVGCKIISLK 359 (433)
T ss_dssp HHGGGCSEEEECCTT-CC--HHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cccCCCCEEEEeCcc-cc--ccHHHHHHHHHHhCCCCeEEEEee
Confidence 124689999987665 33 677888999999999999999964
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.50 E-value=3.5e-14 Score=123.45 Aligned_cols=110 Identities=13% Similarity=0.113 Sum_probs=84.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC---CC--c-----------------------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK---PD--R----------------------- 159 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~---~~--~----------------------- 159 (352)
+.+|||+|||+|.++..++.....++.+|+|+|+|+.|++.|+++.... +. +
T Consensus 52 ~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (250)
T 1o9g_A 52 PVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQAA 131 (250)
T ss_dssp CEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhhhh
Confidence 6799999999999999998862115679999999999999999876543 11 1
Q ss_pred --eE-------------EEEecCCCCCCCCCC----CCCcceEEEehhhhhccC-------hhHHHHHHHHHHHhcCCCE
Q psy11741 160 --CH-------------AFVCDVTSEDWNPPF----APESLDIVLLIFVLDAIN-------PNKMQHVINQVYKYLKPGG 213 (352)
Q Consensus 160 --v~-------------~~~~d~~~~~~~~~~----~~~~fD~V~~~~~l~~~~-------~~~~~~~l~~~~~~LkpgG 213 (352)
+. +.++|+.+. .+. ..++||+|+++..+.+.. .+....+++++.++|+|||
T Consensus 132 ~~v~~~~~~~~~~~~~~~~~~D~~~~---~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 132 RRLRERLTAEGGALPCAIRTADVFDP---RALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHTTSSCCEEEEECCTTCG---GGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTC
T ss_pred hhhhhhccccccccccceeecccccc---cccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCc
Confidence 56 999998742 110 245899999976555442 2567799999999999999
Q ss_pred EEEEEeC
Q psy11741 214 MVLFRDY 220 (352)
Q Consensus 214 ~l~~~~~ 220 (352)
++++...
T Consensus 209 ~l~~~~~ 215 (250)
T 1o9g_A 209 VIAVTDR 215 (250)
T ss_dssp EEEEEES
T ss_pred EEEEeCc
Confidence 9998543
No 178
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.50 E-value=4.6e-13 Score=112.81 Aligned_cols=124 Identities=15% Similarity=0.169 Sum_probs=93.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||+|||+|.++..+++. ...+++|+|+|+.+++.|+++....+.++.++++|+.+ + +++||+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~----~---~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLL---GAKEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE----F---NSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG----C---CCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH----c---CCCCCEEEE
Confidence 3789999999999999999884 22379999999999999999987654579999999874 2 248999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF 266 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf 266 (352)
+..++.........+++.+.+++ ||.+++..... -+.+.+...+++.||
T Consensus 119 ~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~~~~~-----------------------------~~~~~~~~~l~~~g~ 167 (207)
T 1wy7_A 119 NPPFGSQRKHADRPFLLKAFEIS--DVVYSIHLAKP-----------------------------EVRRFIEKFSWEHGF 167 (207)
T ss_dssp CCCCSSSSTTTTHHHHHHHHHHC--SEEEEEEECCH-----------------------------HHHHHHHHHHHHTTE
T ss_pred cCCCccccCCchHHHHHHHHHhc--CcEEEEEeCCc-----------------------------CCHHHHHHHHHHCCC
Confidence 87766664445567888999988 66544431110 124456778889998
Q ss_pred ceEEe
Q psy11741 267 VEKQN 271 (352)
Q Consensus 267 ~~~~~ 271 (352)
.+...
T Consensus 168 ~~~~~ 172 (207)
T 1wy7_A 168 VVTHR 172 (207)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 77654
No 179
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.49 E-value=7.3e-15 Score=121.70 Aligned_cols=109 Identities=12% Similarity=0.061 Sum_probs=82.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++. +..+|+|+|+|+.+++.|+++....+ .++.++++|+.+....++..+++||+|+
T Consensus 45 ~~~vLD~GcG~G~~~~~~~~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 45 GGMALDLYSGSGGLAIEAVSR---GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp SCEEEETTCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCCEEEeCCccCHHHHHHHHc---CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 779999999999999988873 44699999999999999999876543 4699999998742101112257899999
Q ss_pred ehhhhhccChhHHHHHHHHH--HHhcCCCEEEEEEeCCC
Q psy11741 186 LIFVLDAINPNKMQHVINQV--YKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~--~~~LkpgG~l~~~~~~~ 222 (352)
+...++. ......++.+ .++|+|||++++.....
T Consensus 122 ~~~~~~~---~~~~~~~~~l~~~~~L~~gG~l~~~~~~~ 157 (187)
T 2fhp_A 122 LDPPYAK---QEIVSQLEKMLERQLLTNEAVIVCETDKT 157 (187)
T ss_dssp ECCCGGG---CCHHHHHHHHHHTTCEEEEEEEEEEEETT
T ss_pred ECCCCCc---hhHHHHHHHHHHhcccCCCCEEEEEeCCc
Confidence 9776442 2345556666 88899999999976543
No 180
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.48 E-value=8.8e-15 Score=127.54 Aligned_cols=154 Identities=14% Similarity=0.077 Sum_probs=95.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCC---CCcc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFA---PESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~---~~~f 181 (352)
++.+|||+|||+|.++..++... ++.+|+|+|+|+.|++.|++++...+ .++.++++|+.+.. ..+++ +++|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~~~~~~f 141 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATL--NGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLL-MDALKEESEIIY 141 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHH--HCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSS-TTTSTTCCSCCB
T ss_pred CCCEEEEeCCChhHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhh-hhhhhcccCCcc
Confidence 36799999999999999998865 56799999999999999999876543 35999999976421 01222 2689
Q ss_pred eEEEehhhhhccC-------------hhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCee
Q psy11741 182 DIVLLIFVLDAIN-------------PNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTL 248 (352)
Q Consensus 182 D~V~~~~~l~~~~-------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (352)
|+|+++-..++.. ......++..++++|||||.+.+........... .... .+... ..
T Consensus 142 D~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~~~~~~~~~~~~-l~~~-----g~~~~---~~ 212 (254)
T 2h00_A 142 DFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEFVKRIIHDSLQL-KKRL-----RWYSC---ML 212 (254)
T ss_dssp SEEEECCCCC-------------------------CTTTTHHHHTHHHHHHHHHHHHHHH-GGGB-----SCEEE---EE
T ss_pred cEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEEEHHHHHHHHhc-ccce-----EEEEE---CC
Confidence 9999974433321 0112356778899999999877643110000000 0000 00100 01
Q ss_pred eeccCHHHHHHHHHhCCCceEEee
Q psy11741 249 VYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 249 ~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
......+++.++++++||..+...
T Consensus 213 ~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 213 GKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp SSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred CChhHHHHHHHHHHHcCCCceEEE
Confidence 112345789999999999987653
No 181
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.48 E-value=1.2e-15 Score=131.86 Aligned_cols=100 Identities=16% Similarity=0.232 Sum_probs=85.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|++++...+ .++.++++|+.+. + ++++||+|+
T Consensus 79 ~~~vLD~gcG~G~~~~~la~----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~-~~~~~D~v~ 149 (241)
T 3gdh_A 79 CDVVVDAFCGVGGNTIQFAL----TGMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLL----A-SFLKADVVF 149 (241)
T ss_dssp CSEEEETTCTTSHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHH----G-GGCCCSEEE
T ss_pred CCEEEECccccCHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHh----c-ccCCCCEEE
Confidence 78999999999999999998 56799999999999999999987655 4799999998742 2 367999999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+...+++. .+....+.+++++|+|||.+++.
T Consensus 150 ~~~~~~~~--~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 150 LSPPWGGP--DYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp ECCCCSSG--GGGGSSSBCTTTSCSSCHHHHHH
T ss_pred ECCCcCCc--chhhhHHHHHHhhcCCcceeHHH
Confidence 99888887 45455777899999999997664
No 182
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.48 E-value=9.3e-14 Score=125.05 Aligned_cols=102 Identities=19% Similarity=0.213 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++... ...+|+|+|+|+.+++.|+++....+ .++.+..+|+.+. . ..+++||+|+
T Consensus 75 ~~~~VLDiGcG~G~~~~~la~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~---~-~~~~~fD~Iv 149 (317)
T 1dl5_A 75 KGMRVLEIGGGTGYNAAVMSRVVG-EKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYG---V-PEFSPYDVIF 149 (317)
T ss_dssp TTCEEEEECCTTSHHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGC---C-GGGCCEEEEE
T ss_pred CcCEEEEecCCchHHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhc---c-ccCCCeEEEE
Confidence 478999999999999999998752 24679999999999999999876543 4699999998752 2 2357899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+..+++++. +.+.++|||||++++....
T Consensus 150 ~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 177 (317)
T 1dl5_A 150 VTVGVDEVP--------ETWFTQLKEGGRVIVPINL 177 (317)
T ss_dssp ECSBBSCCC--------HHHHHHEEEEEEEEEEBCB
T ss_pred EcCCHHHHH--------HHHHHhcCCCcEEEEEECC
Confidence 999999884 4678899999999997543
No 183
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.48 E-value=5.1e-14 Score=121.04 Aligned_cols=103 Identities=16% Similarity=0.230 Sum_probs=85.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCC--CCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFA--PESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~--~~~fD~ 183 (352)
+.+|||+|||+|..+..+++.+ ++.+|+++|+|+.+++.|++++...+ .++.+..+|+... ++.. +++||+
T Consensus 55 ~~~vLdiG~G~G~~~~~la~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~~~~fD~ 129 (233)
T 2gpy_A 55 PARILEIGTAIGYSAIRMAQAL--PEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQL---GEKLELYPLFDV 129 (233)
T ss_dssp CSEEEEECCTTSHHHHHHHHHC--TTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGS---HHHHTTSCCEEE
T ss_pred CCEEEEecCCCcHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHH---HHhcccCCCccE
Confidence 6799999999999999999976 57899999999999999999876543 4699999998742 1211 468999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
|++.... .+...+++.+.++|+|||++++.+.
T Consensus 130 I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 161 (233)
T 2gpy_A 130 LFIDAAK-----GQYRRFFDMYSPMVRPGGLILSDNV 161 (233)
T ss_dssp EEEEGGG-----SCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred EEECCCH-----HHHHHHHHHHHHHcCCCeEEEEEcC
Confidence 9987654 3567899999999999999999754
No 184
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.48 E-value=1.3e-13 Score=124.45 Aligned_cols=107 Identities=14% Similarity=0.070 Sum_probs=81.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-C--ceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-D--RCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||+|||+|.++..++. .+.+|+++|+|+.+++.|++++...+ . ++.++++|+.+....+....++||+|
T Consensus 154 ~~~VLDlgcGtG~~sl~la~----~ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~I 229 (332)
T 2igt_A 154 PLKVLNLFGYTGVASLVAAA----AGAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDII 229 (332)
T ss_dssp CCEEEEETCTTCHHHHHHHH----TTCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEE
T ss_pred CCcEEEcccccCHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEE
Confidence 67999999999999999998 45599999999999999999976533 2 48999999874210000014689999
Q ss_pred Eehhh----------hhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 185 LLIFV----------LDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 185 ~~~~~----------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++.-- +++. .+...+++.+.++|+|||++++...
T Consensus 230 i~dPP~~~~~~~~~~~~~~--~~~~~ll~~~~~~LkpgG~lli~~~ 273 (332)
T 2igt_A 230 LTDPPKFGRGTHGEVWQLF--DHLPLMLDICREILSPKALGLVLTA 273 (332)
T ss_dssp EECCCSEEECTTCCEEEHH--HHHHHHHHHHHHTBCTTCCEEEEEE
T ss_pred EECCccccCCchHHHHHHH--HHHHHHHHHHHHhcCcCcEEEEEEC
Confidence 98321 1222 5678999999999999999877643
No 185
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.47 E-value=1.2e-13 Score=124.95 Aligned_cols=102 Identities=23% Similarity=0.363 Sum_probs=82.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..+++. +..+|+|+|+| .|++.|+++....+ .+++++.+|+.+ +++++++||+|+
T Consensus 39 ~~~VLDiGcGtG~ls~~la~~---g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~----~~~~~~~~D~Iv 110 (328)
T 1g6q_1 39 DKIVLDVGCGTGILSMFAAKH---GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLED----VHLPFPKVDIII 110 (328)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTT----SCCSSSCEEEEE
T ss_pred CCEEEEecCccHHHHHHHHHC---CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhh----ccCCCCcccEEE
Confidence 779999999999999988884 33489999999 59999998876533 569999999974 344567899999
Q ss_pred ehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 186 LIFVLDAI-NPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 186 ~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
+..+.+++ ....+..++..+.++|+|||.++.
T Consensus 111 s~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 111 SEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp ECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 97554443 335678899999999999999974
No 186
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.47 E-value=4.3e-14 Score=120.61 Aligned_cols=108 Identities=19% Similarity=0.127 Sum_probs=84.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCC-CCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFA-PESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~-~~~fD~V 184 (352)
+.+|||+|||+|..+..+++.+. ++.+|+|+|+++.+++.|++++...+ .+++++++|+.+....++.. .++||+|
T Consensus 59 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v 137 (223)
T 3duw_A 59 ARNILEIGTLGGYSTIWLARGLS-SGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFI 137 (223)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCC-SSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEE
T ss_pred CCEEEEecCCccHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEE
Confidence 78999999999999999999763 27899999999999999999876533 46999999986421001101 1579999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++... ......+++.+.++|+|||++++.+..
T Consensus 138 ~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 169 (223)
T 3duw_A 138 FIDAD-----KQNNPAYFEWALKLSRPGTVIIGDNVV 169 (223)
T ss_dssp EECSC-----GGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred EEcCC-----cHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 98654 245678999999999999999987543
No 187
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.47 E-value=5e-14 Score=119.10 Aligned_cols=103 Identities=14% Similarity=0.099 Sum_probs=83.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .++++..+|+.+. ++..++ ||+|+
T Consensus 57 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~~~~-fD~v~ 131 (210)
T 3c3p_A 57 PQLVVVPGDGLGCASWWFARAIS-ISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGI---AAGQRD-IDILF 131 (210)
T ss_dssp CSEEEEESCGGGHHHHHHHTTSC-TTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHH---HTTCCS-EEEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHH---hccCCC-CCEEE
Confidence 67999999999999999999762 27899999999999999998876432 4689999998642 222245 99999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+... ..+...+++.+.++|+|||++++.+.
T Consensus 132 ~~~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~ 161 (210)
T 3c3p_A 132 MDCD-----VFNGADVLERMNRCLAKNALLIAVNA 161 (210)
T ss_dssp EETT-----TSCHHHHHHHHGGGEEEEEEEEEESS
T ss_pred EcCC-----hhhhHHHHHHHHHhcCCCeEEEEECc
Confidence 8632 25667899999999999999998653
No 188
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.47 E-value=1e-13 Score=118.50 Aligned_cols=102 Identities=17% Similarity=0.129 Sum_probs=82.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC------CCceEEEEecCCCCCCCCCCCCCc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK------PDRCHAFVCDVTSEDWNPPFAPES 180 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~~~~ 180 (352)
++.+|||+|||+|..+..+++..+ +..+|+|+|+|+.+++.|+++.... ..++.+.++|+... ...+++
T Consensus 77 ~~~~vLDiG~G~G~~~~~la~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~----~~~~~~ 151 (226)
T 1i1n_A 77 EGAKALDVGSGSGILTACFARMVG-CTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG----YAEEAP 151 (226)
T ss_dssp TTCEEEEETCTTSHHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC----CGGGCC
T ss_pred CCCEEEEEcCCcCHHHHHHHHHhC-CCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccC----cccCCC
Confidence 478999999999999999998753 4469999999999999999887642 24799999998742 223568
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
||+|++...++++ ++.+.++|||||++++....
T Consensus 152 fD~i~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 152 YDAIHVGAAAPVV--------PQALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp EEEEEECSBBSSC--------CHHHHHTEEEEEEEEEEESC
T ss_pred cCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEec
Confidence 9999998887766 35788999999999997654
No 189
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.47 E-value=4.2e-14 Score=120.84 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=84.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCC--CCCCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP--FAPESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~--~~~~~fD~ 183 (352)
+.+|||+|||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .++++.++|+.+....+. ...++||+
T Consensus 65 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (225)
T 3tr6_A 65 AKKVIDIGTFTGYSAIAMGLALP-KDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDL 143 (225)
T ss_dssp CSEEEEECCTTSHHHHHHHTTCC-TTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEE
T ss_pred CCEEEEeCCcchHHHHHHHHhCC-CCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccE
Confidence 67999999999999999999763 37899999999999999999876543 459999999854210000 01178999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
|++... ..+...+++.+.++|+|||++++.+..
T Consensus 144 v~~~~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~~ 176 (225)
T 3tr6_A 144 IYIDAD-----KANTDLYYEESLKLLREGGLIAVDNVL 176 (225)
T ss_dssp EEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EEECCC-----HHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 996542 356788999999999999999997654
No 190
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.46 E-value=1.1e-14 Score=125.81 Aligned_cols=105 Identities=14% Similarity=0.151 Sum_probs=85.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCC-----CCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFA-----PES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~-----~~~ 180 (352)
+.+|||||||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .+++++++|+.+. ++.. +++
T Consensus 61 ~~~VLDiG~G~G~~t~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~---l~~~~~~~~~~~ 136 (242)
T 3r3h_A 61 AKKVLELGTFTGYSALAMSLALP-DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDT---LHSLLNEGGEHQ 136 (242)
T ss_dssp CSEEEEEESCCSHHHHHHHHTSC-TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHH---HHHHHHHHCSSC
T ss_pred cCEEEEeeCCcCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH---HHHHhhccCCCC
Confidence 67999999999999999999773 37899999999999999999876543 5799999998642 1111 478
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
||+|++... ..+...+++.+.++|+|||+|++.+..
T Consensus 137 fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~~ 172 (242)
T 3r3h_A 137 FDFIFIDAD-----KTNYLNYYELALKLVTPKGLIAIDNIF 172 (242)
T ss_dssp EEEEEEESC-----GGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred EeEEEEcCC-----hHHhHHHHHHHHHhcCCCeEEEEECCc
Confidence 999998643 356678999999999999999997643
No 191
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.46 E-value=6e-14 Score=114.84 Aligned_cols=100 Identities=12% Similarity=0.195 Sum_probs=79.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC--------CCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP--------FAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~--------~~~ 178 (352)
++.+|||+|||+|.++..+++.++ ++.+++|+|+|+ +++. .++.+.++|+.+ .+ +++
T Consensus 22 ~~~~vLd~G~G~G~~~~~l~~~~~-~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~----~~~~~~~~~~~~~ 86 (180)
T 1ej0_A 22 PGMTVVDLGAAPGGWSQYVVTQIG-GKGRIIACDLLP-MDPI---------VGVDFLQGDFRD----ELVMKALLERVGD 86 (180)
T ss_dssp TTCEEEEESCTTCHHHHHHHHHHC-TTCEEEEEESSC-CCCC---------TTEEEEESCTTS----HHHHHHHHHHHTT
T ss_pred CCCeEEEeCCCCCHHHHHHHHHhC-CCCeEEEEECcc-cccc---------CcEEEEEccccc----chhhhhhhccCCC
Confidence 377999999999999999998753 467999999999 6532 468899999874 22 456
Q ss_pred CcceEEEehhhhhccChh---H------HHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 179 ESLDIVLLIFVLDAINPN---K------MQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~---~------~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++||+|++...+++.... . ...+++++.++|+|||.+++..+.
T Consensus 87 ~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (180)
T 1ej0_A 87 SKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQ 138 (180)
T ss_dssp CCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEES
T ss_pred CceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 799999998877765221 1 168899999999999999997654
No 192
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.45 E-value=9.2e-13 Score=111.97 Aligned_cols=139 Identities=13% Similarity=0.152 Sum_probs=103.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||||||+|-++..++... +..+|+++|+++.|++.+++++...+.+..+.+.|.... .+.++||+|++.
T Consensus 133 p~~VLDLGCG~GpLAl~~~~~~--p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~-----~p~~~~DvaL~l 205 (281)
T 3lcv_B 133 PNTLRDLACGLNPLAAPWMGLP--AETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLED-----RLDEPADVTLLL 205 (281)
T ss_dssp CSEEEETTCTTGGGCCTTTTCC--TTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTS-----CCCSCCSEEEET
T ss_pred CceeeeeccCccHHHHHHHhhC--CCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeeccc-----CCCCCcchHHHH
Confidence 6799999999999999998865 788999999999999999999887777789999998642 246889999999
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
-+++++..+.....+ ++...|+|+|+++--..-.- .| ...+ ..-.-...|.+.+.+.|..
T Consensus 206 kti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl--------~G---------rs~g--m~~~Y~~~~e~~~~~~g~~ 265 (281)
T 3lcv_B 206 KTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSL--------GQ---------RSKG--MFQNYSQSFESQARERSCR 265 (281)
T ss_dssp TCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------------------------C--HHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhh--------cC---------CCcc--hhhHHHHHHHHHHHhcCCc
Confidence 999999433334455 89999999998886432100 00 0000 0011245677778888887
Q ss_pred eEEeee
Q psy11741 268 EKQNLI 273 (352)
Q Consensus 268 ~~~~~~ 273 (352)
+....+
T Consensus 266 ~~~~~~ 271 (281)
T 3lcv_B 266 IQRLEI 271 (281)
T ss_dssp EEEEEE
T ss_pred eeeeee
Confidence 666654
No 193
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.45 E-value=3.4e-13 Score=113.03 Aligned_cols=104 Identities=21% Similarity=0.270 Sum_probs=75.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC----C---------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN----P--------- 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~----~--------- 174 (352)
+.+|||+|||+|.++..+++.++.++.+|+|+|+|+.+ ...++.+.++|+.+.... .
T Consensus 23 ~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~ 92 (201)
T 2plw_A 23 NKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD----------PIPNVYFIQGEIGKDNMNNIKNINYIDNMNNN 92 (201)
T ss_dssp TEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC----------CCTTCEEEECCTTTTSSCCC-----------C
T ss_pred CCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC----------CCCCceEEEccccchhhhhhccccccccccch
Confidence 67999999999999999998762116899999999831 124688999998753200 0
Q ss_pred --------CCCCCcceEEEehhhhhccCh--hH-------HHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 175 --------PFAPESLDIVLLIFVLDAINP--NK-------MQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 175 --------~~~~~~fD~V~~~~~l~~~~~--~~-------~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
.+++++||+|++..++++... .+ ...+++.+.++|+|||.+++..+.
T Consensus 93 ~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 93 SVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred hhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 034578999999877665311 11 234889999999999999986543
No 194
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.45 E-value=1.2e-13 Score=130.69 Aligned_cols=103 Identities=22% Similarity=0.300 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||||||+|.++..+++. +..+|+|+|+|+ |++.|++++...+ .+++++.+|+.+. ++ +++||+|
T Consensus 158 ~~~~VLDiGcGtG~la~~la~~---~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~----~~-~~~fD~I 228 (480)
T 3b3j_A 158 KDKIVLDVGCGSGILSFFAAQA---GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEV----SL-PEQVDII 228 (480)
T ss_dssp TTCEEEEESCSTTHHHHHHHHT---TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTC----CC-SSCEEEE
T ss_pred CCCEEEEecCcccHHHHHHHHc---CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhC----cc-CCCeEEE
Confidence 3789999999999999988873 556999999999 9999998876543 6799999999752 33 3589999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
++..+++++..++....+..++++|||||.+++.
T Consensus 229 vs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 229 ISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp ECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 9988878776667778888999999999999863
No 195
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.44 E-value=9.1e-14 Score=120.49 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=84.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
+.+|||||||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .+++++.+|+.+. ++ + .++
T Consensus 80 ~~~VLeiG~G~G~~~~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~---l~~l~~~~~~~~ 155 (247)
T 1sui_A 80 AKNTMEIGVYTGYSLLATALAIP-EDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPV---LDEMIKDEKNHG 155 (247)
T ss_dssp CCEEEEECCGGGHHHHHHHHHSC-TTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHH---HHHHHHSGGGTT
T ss_pred cCEEEEeCCCcCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHH---HHHHHhccCCCC
Confidence 67999999999999999999873 37899999999999999999876543 4799999998641 11 1 147
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+||+|++... ..+...+++.+.++|+|||++++.+.
T Consensus 156 ~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~d~~ 191 (247)
T 1sui_A 156 SYDFIFVDAD-----KDNYLNYHKRLIDLVKVGGVIGYDNT 191 (247)
T ss_dssp CBSEEEECSC-----STTHHHHHHHHHHHBCTTCCEEEECT
T ss_pred CEEEEEEcCc-----hHHHHHHHHHHHHhCCCCeEEEEecC
Confidence 8999998643 24667899999999999999999753
No 196
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.43 E-value=1.7e-13 Score=121.71 Aligned_cols=109 Identities=17% Similarity=0.191 Sum_probs=85.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-CCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-PDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||||||+|.++..+++.+ ++.++++||+++.+++.|++++... .++++++.+|+.+.. ...++++||+|++
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~--p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l--~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVY--PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVA--ESFTPASRDVIIR 165 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHS--TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHH--HTCCTTCEEEEEE
T ss_pred CCEEEEEECCcCHHHHHHHHHC--CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHH--hhccCCCCCEEEE
Confidence 3499999999999999999866 7779999999999999999987642 468999999987421 1223678999998
Q ss_pred hhhhhccChhH--HHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 187 IFVLDAINPNK--MQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 187 ~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
....+...+.. ...+++.++++|+|||++++...
T Consensus 166 D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~~ 201 (317)
T 3gjy_A 166 DVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANCG 201 (317)
T ss_dssp CCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEec
Confidence 64433222222 26899999999999999998754
No 197
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.43 E-value=1.2e-13 Score=118.88 Aligned_cols=102 Identities=13% Similarity=0.123 Sum_probs=79.8
Q ss_pred CCeEEEEcCCccccHHHHHhh---cCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC-CCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEH---CKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA-PESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~---~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD~ 183 (352)
+.+|||||||+|..+..+++. +. ++.+|+|+|+|+.|++.|+.. ..+++++++|+.+.. .++.. ..+||+
T Consensus 82 ~~~VLDiG~GtG~~t~~la~~~~~~~-~~~~V~gvD~s~~~l~~a~~~----~~~v~~~~gD~~~~~-~l~~~~~~~fD~ 155 (236)
T 2bm8_A 82 PRTIVELGVYNGGSLAWFRDLTKIMG-IDCQVIGIDRDLSRCQIPASD----MENITLHQGDCSDLT-TFEHLREMAHPL 155 (236)
T ss_dssp CSEEEEECCTTSHHHHHHHHHHHHTT-CCCEEEEEESCCTTCCCCGGG----CTTEEEEECCSSCSG-GGGGGSSSCSSE
T ss_pred CCEEEEEeCCCCHHHHHHHHhhhhcC-CCCEEEEEeCChHHHHHHhcc----CCceEEEECcchhHH-HHHhhccCCCCE
Confidence 679999999999999999886 22 678999999999999888721 367999999987521 02322 347999
Q ss_pred EEehhhhhccChhHHHHHHHHHHH-hcCCCEEEEEEeC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYK-YLKPGGMVLFRDY 220 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~-~LkpgG~l~~~~~ 220 (352)
|++... |. +...++.++.+ +|||||+|++.+.
T Consensus 156 I~~d~~--~~---~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 156 IFIDNA--HA---NTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EEEESS--CS---SHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EEECCc--hH---hHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 998654 32 56789999997 9999999999754
No 198
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.43 E-value=4.2e-13 Score=118.02 Aligned_cols=102 Identities=16% Similarity=0.345 Sum_probs=84.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.. +..+|+|+|+|+.+++.|+++++..+ .++.++++|+.+. +. .++||+|+
T Consensus 119 ~~~~VLDlgcG~G~~s~~la~~~--~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~----~~-~~~~D~Vi 191 (272)
T 3a27_A 119 ENEVVVDMFAGIGYFTIPLAKYS--KPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV----EL-KDVADRVI 191 (272)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHT--CCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC----CC-TTCEEEEE
T ss_pred CCCEEEEecCcCCHHHHHHHHhC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc----Cc-cCCceEEE
Confidence 47899999999999999999975 45699999999999999999987654 5789999999853 22 56899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+.... ....++..+.+.|+|||++++.+..
T Consensus 192 ~d~p~------~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 192 MGYVH------KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp ECCCS------SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred ECCcc------cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 86432 4456888999999999999997654
No 199
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.42 E-value=1.8e-13 Score=117.01 Aligned_cols=106 Identities=13% Similarity=0.138 Sum_probs=82.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcC---CCCeEEEEEeCCHHHHHHHHhccccC------CCceEEEEecCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCK---NDNVFVYGCDFSENAVNILKEHEEYK------PDRCHAFVCDVTSEDWNPPFA 177 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~---~~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~~ 177 (352)
++.+|||+|||+|.++..+++... .+..+|+|+|+|+.+++.|+++.... ..++.+..+|+..........
T Consensus 80 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~ 159 (227)
T 2pbf_A 80 PGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKE 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCcc
Confidence 378999999999999999998642 12459999999999999999987653 357999999987421000023
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.++||+|++...++++ ++.+.++|+|||++++...
T Consensus 160 ~~~fD~I~~~~~~~~~--------~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 160 LGLFDAIHVGASASEL--------PEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HCCEEEEEECSBBSSC--------CHHHHHHEEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHHH--------HHHHHHhcCCCcEEEEEEc
Confidence 5789999998887765 4678899999999999754
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.42 E-value=1.7e-13 Score=121.09 Aligned_cols=108 Identities=18% Similarity=0.244 Sum_probs=84.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-----CCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-----PDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++.. +..+++++|+++.+++.|++++... .++++++.+|+.+. ++..+++||
T Consensus 79 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 153 (283)
T 2i7c_A 79 PKNVLVVGGGDGGIIRELCKYK--SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENVTNTYD 153 (283)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHCCSCEE
T ss_pred CCeEEEEeCCcCHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHH---HHhCCCCce
Confidence 6799999999999999998864 5679999999999999999987542 46899999998642 112257899
Q ss_pred EEEehhhhhccChhHH--HHHHHHHHHhcCCCEEEEEEeC
Q psy11741 183 IVLLIFVLDAINPNKM--QHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~--~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|++....+..+...+ ..+++.++++|+|||++++...
T Consensus 154 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~ 193 (283)
T 2i7c_A 154 VIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCE 193 (283)
T ss_dssp EEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEECC
Confidence 9999554332222233 6899999999999999999754
No 201
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.42 E-value=6.4e-13 Score=122.38 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=81.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++. .+..|+|+|+|+.+++.|++++...+....+.++|+.+. ++...+.||+|++.
T Consensus 215 g~~VLDlg~GtG~~sl~~a~----~ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~---l~~~~~~fD~Ii~d 287 (393)
T 4dmg_A 215 GERVLDVYSYVGGFALRAAR----KGAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPT---LRGLEGPFHHVLLD 287 (393)
T ss_dssp TCEEEEESCTTTHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHH---HHTCCCCEEEEEEC
T ss_pred CCeEEEcccchhHHHHHHHH----cCCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHH---HHHhcCCCCEEEEC
Confidence 78999999999999999998 455699999999999999999876554456778888642 11113349999984
Q ss_pred hhhhccC-------hhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 188 FVLDAIN-------PNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 188 ~~l~~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
-....-+ ..+...++..+.++|+|||+|++.+...
T Consensus 288 pP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s~ 329 (393)
T 4dmg_A 288 PPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCSY 329 (393)
T ss_dssp CCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 3211100 1456788999999999999999766543
No 202
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.42 E-value=5.6e-13 Score=114.69 Aligned_cols=100 Identities=23% Similarity=0.271 Sum_probs=81.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.. + .+|+|+|+|+.+++.|+++....+ .++.+..+|+.. .++ ....||+|+
T Consensus 91 ~~~~vLdiG~G~G~~~~~la~~~--~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~-~~~~fD~Ii 163 (235)
T 1jg1_A 91 PGMNILEVGTGSGWNAALISEIV--K-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK---GFP-PKAPYDVII 163 (235)
T ss_dssp TTCCEEEECCTTSHHHHHHHHHH--C-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG---CCG-GGCCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHh--C-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc---CCC-CCCCccEEE
Confidence 47799999999999999999875 3 689999999999999999876543 468999999732 222 134599999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+..+++++. ..+.++|+|||++++....
T Consensus 164 ~~~~~~~~~--------~~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 164 VTAGAPKIP--------EPLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp ECSBBSSCC--------HHHHHTEEEEEEEEEEECS
T ss_pred ECCcHHHHH--------HHHHHhcCCCcEEEEEEec
Confidence 999988873 2678999999999997654
No 203
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.42 E-value=1.3e-13 Score=123.24 Aligned_cols=106 Identities=19% Similarity=0.241 Sum_probs=80.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-----CCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-----PDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++.. +..+|+++|+|+.+++.|++++... .++++++.+|+.+. ++..+++||
T Consensus 109 ~~~VLdIG~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~---l~~~~~~fD 183 (314)
T 2b2c_A 109 PKRVLIIGGGDGGILREVLKHE--SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEF---LKNHKNEFD 183 (314)
T ss_dssp CCEEEEESCTTSHHHHHHTTCT--TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHH---HHHCTTCEE
T ss_pred CCEEEEEcCCcCHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHH---HHhcCCCce
Confidence 6799999999999999999864 5679999999999999999987542 46799999998641 222357899
Q ss_pred EEEehhhhhccCh-hHH--HHHHHHHHHhcCCCEEEEEEe
Q psy11741 183 IVLLIFVLDAINP-NKM--QHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 183 ~V~~~~~l~~~~~-~~~--~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|++... .++.+ ..+ ..+++.++++|+|||++++..
T Consensus 184 ~Ii~d~~-~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 184 VIITDSS-DPVGPAESLFGQSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp EEEECCC--------------HHHHHHHHEEEEEEEEEEC
T ss_pred EEEEcCC-CCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence 9998553 22221 222 688999999999999999974
No 204
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.42 E-value=1.3e-13 Score=118.50 Aligned_cols=108 Identities=16% Similarity=0.174 Sum_probs=84.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCC--CcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAP--ESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~--~~fD~ 183 (352)
+.+|||+|||+|..+..+++.+. ++.+++++|+|+.+++.|++++...+ .++.+..+|+.+....++..+ ++||+
T Consensus 73 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~ 151 (232)
T 3cbg_A 73 AKQVLEIGVFRGYSALAMALQLP-PDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDL 151 (232)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSC-TTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEE
T ss_pred CCEEEEecCCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCE
Confidence 67999999999999999999763 36799999999999999998875432 468999998753111122222 78999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
|++... ..+...+++.+.++|+|||++++.+..
T Consensus 152 V~~d~~-----~~~~~~~l~~~~~~LkpgG~lv~~~~~ 184 (232)
T 3cbg_A 152 IFIDAD-----KRNYPRYYEIGLNLLRRGGLMVIDNVL 184 (232)
T ss_dssp EEECSC-----GGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 997643 256788999999999999999997643
No 205
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.41 E-value=3e-13 Score=121.99 Aligned_cols=108 Identities=20% Similarity=0.225 Sum_probs=83.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++.. +..+|+++|+|+.+++.|++++.. ..++++++++|+.+.. ...++++||
T Consensus 121 ~~~VLdIG~G~G~~a~~la~~~--~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l--~~~~~~~fD 196 (334)
T 1xj5_A 121 PKKVLVIGGGDGGVLREVARHA--SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFL--KNAAEGSYD 196 (334)
T ss_dssp CCEEEEETCSSSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHH--HTSCTTCEE
T ss_pred CCEEEEECCCccHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHH--HhccCCCcc
Confidence 6899999999999999999864 567999999999999999998753 2467999999986421 012357899
Q ss_pred EEEehhhhhccChhH--HHHHHHHHHHhcCCCEEEEEEe
Q psy11741 183 IVLLIFVLDAINPNK--MQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|++........... ...+++.+.++|+|||+|++..
T Consensus 197 lIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 197 AVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp EEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred EEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 999854321111122 4789999999999999999963
No 206
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.41 E-value=1.7e-13 Score=122.21 Aligned_cols=109 Identities=16% Similarity=0.151 Sum_probs=82.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++.. +..+|+++|+++.+++.|++++.. ..++++++.+|+.+. ++..+++||
T Consensus 96 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~---l~~~~~~fD 170 (304)
T 2o07_A 96 PRKVLIIGGGDGGVLREVVKHP--SVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEF---MKQNQDAFD 170 (304)
T ss_dssp CCEEEEEECTTSHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---HHTCSSCEE
T ss_pred CCEEEEECCCchHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHH---HhhCCCCce
Confidence 6799999999999999999864 567999999999999999998753 246899999998641 222357899
Q ss_pred EEEehhhhhccChh--HHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 183 IVLLIFVLDAINPN--KMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 183 ~V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+|++....+..+.. ....+++.+.++|+|||++++...+
T Consensus 171 ~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 171 VIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEEECC-----------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99985443221111 2357899999999999999997533
No 207
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.41 E-value=3.3e-13 Score=124.44 Aligned_cols=111 Identities=14% Similarity=0.091 Sum_probs=82.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-C--ceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-D--RCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~--~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.|++.|++++...+ . +++++++|+.+....+.....+||+|
T Consensus 213 ~~~VLDl~cGtG~~sl~la~~---ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 213 GKTVLNLFSYTAAFSVAAAMG---GAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TCEEEEETCTTTHHHHHHHHT---TBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEEeeccCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 789999999999999999983 22389999999999999999987654 2 79999999864210011114589999
Q ss_pred Eehhhh-----hccC--hhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIFVL-----DAIN--PNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~~l-----~~~~--~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++.-.. .+.. ...+..++..+.++|+|||++++....
T Consensus 290 i~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~ 333 (385)
T 2b78_A 290 IIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA 333 (385)
T ss_dssp EECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 983211 1121 245667888999999999999997654
No 208
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.41 E-value=2.3e-13 Score=122.26 Aligned_cols=108 Identities=19% Similarity=0.281 Sum_probs=83.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-----CCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-----PDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|.++..+++.. +..+|+++|+|+.+++.|++++... .++++++++|+.+. ++..+++||
T Consensus 117 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 191 (321)
T 2pt6_A 117 PKNVLVVGGGDGGIIRELCKYK--SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKF---LENVTNTYD 191 (321)
T ss_dssp CCEEEEEECTTCHHHHHHTTCT--TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHH---HHHCCSCEE
T ss_pred CCEEEEEcCCccHHHHHHHHcC--CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHH---HhhcCCCce
Confidence 6799999999999999999864 5679999999999999999987541 36799999998641 112257899
Q ss_pred EEEehhhhhccC-hhHH--HHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 183 IVLLIFVLDAIN-PNKM--QHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 183 ~V~~~~~l~~~~-~~~~--~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+|++.... .+. .... ..+++.+.++|+|||++++...+
T Consensus 192 vIi~d~~~-p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSD-PIGPAETLFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCC-SSSGGGGGSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcC-CCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 99986431 221 1222 68999999999999999997543
No 209
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.41 E-value=4.4e-12 Score=116.60 Aligned_cols=104 Identities=13% Similarity=0.046 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC-ceEEEEecCCCCCCCCCC-CCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD-RCHAFVCDVTSEDWNPPF-APESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~-~~~~fD~V 184 (352)
++.+|||+| |+|.++..++... +..+|+|+|+|+.|++.|++++...+. +++++++|+.+ .++. .+++||+|
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~--~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~---~l~~~~~~~fD~V 245 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSG--LPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRK---PLPDYALHKFDTF 245 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHT--CCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTS---CCCTTTSSCBSEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhh---hchhhccCCccEE
Confidence 378999999 9999999998754 556999999999999999999775432 79999999975 2332 24689999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEE-EEEEe
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGM-VLFRD 219 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~-l~~~~ 219 (352)
+++..++.. ....+++++.++|+|||. +++..
T Consensus 246 i~~~p~~~~---~~~~~l~~~~~~LkpgG~~~~~~~ 278 (373)
T 2qm3_A 246 ITDPPETLE---AIRAFVGRGIATLKGPRCAGYFGI 278 (373)
T ss_dssp EECCCSSHH---HHHHHHHHHHHTBCSTTCEEEEEE
T ss_pred EECCCCchH---HHHHHHHHHHHHcccCCeEEEEEE
Confidence 997654433 358899999999999994 45543
No 210
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.41 E-value=2.5e-13 Score=119.50 Aligned_cols=108 Identities=15% Similarity=0.104 Sum_probs=83.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|.++..+++.. +..+|+++|+++.+++.|++++.. ..++++++.+|+... ++..+++||
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~---l~~~~~~fD 150 (275)
T 1iy9_A 76 PEHVLVVGGGDGGVIREILKHP--SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMH---IAKSENQYD 150 (275)
T ss_dssp CCEEEEESCTTCHHHHHHTTCT--TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHH---HHTCCSCEE
T ss_pred CCEEEEECCchHHHHHHHHhCC--CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---HhhCCCCee
Confidence 6799999999999999998853 457999999999999999998732 246899999998642 222357899
Q ss_pred EEEehhhhhccChh--HHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 183 IVLLIFVLDAINPN--KMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 183 ~V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|++....+..... ....+++.++++|+|||++++...
T Consensus 151 ~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~~ 190 (275)
T 1iy9_A 151 VIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTD 190 (275)
T ss_dssp EEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcC
Confidence 99995443221111 125789999999999999999743
No 211
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.40 E-value=6.9e-13 Score=121.24 Aligned_cols=111 Identities=15% Similarity=0.117 Sum_probs=86.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
..++.+|||+|||+|.++..++.... +..+++|+|+|+.|++.|++++...+ .++.+.++|+.+ ++.+.+.||+
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~-~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~----~~~~~~~~D~ 275 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLG-PTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARH----LPRFFPEVDR 275 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHC-TTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGG----GGGTCCCCSE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhC-CCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhh----CccccCCCCE
Confidence 34578999999999999999988652 45689999999999999999987654 379999999984 3444567999
Q ss_pred EEehhhhhcc--C----hhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 184 VLLIFVLDAI--N----PNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 184 V~~~~~l~~~--~----~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
|+++-..... + ......+++.+.++|+|||.+++.+.
T Consensus 276 Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 276 ILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp EEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred EEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9995432211 1 12347889999999999999999754
No 212
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.40 E-value=3.7e-13 Score=115.97 Aligned_cols=107 Identities=18% Similarity=0.130 Sum_probs=84.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCC---CCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP---FAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~---~~~~~fD 182 (352)
+.+|||||||+|..+..+++.+. ++.+++++|+|+.+++.|++++...+ .+++++.+|+.+....+. ...++||
T Consensus 71 ~~~VLeiG~G~G~~~~~la~~~~-~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD 149 (237)
T 3c3y_A 71 AKKTIEVGVFTGYSLLLTALSIP-DDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYD 149 (237)
T ss_dssp CCEEEEECCTTSHHHHHHHHHSC-TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEE
T ss_pred CCEEEEeCCCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcC
Confidence 67999999999999999999873 37899999999999999999876544 469999999864210010 0147899
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|++... ..+...+++.+.++|+|||++++.+.
T Consensus 150 ~I~~d~~-----~~~~~~~l~~~~~~L~pGG~lv~d~~ 182 (237)
T 3c3y_A 150 FGFVDAD-----KPNYIKYHERLMKLVKVGGIVAYDNT 182 (237)
T ss_dssp EEEECSC-----GGGHHHHHHHHHHHEEEEEEEEEECT
T ss_pred EEEECCc-----hHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 9998532 35678899999999999999999754
No 213
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.40 E-value=2.6e-13 Score=121.75 Aligned_cols=107 Identities=19% Similarity=0.215 Sum_probs=84.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc------CCCceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY------KPDRCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+.+|||||||+|..+..+++.. +..+++++|+++.+++.|++++.. ..++++++.+|+.+. ++..+++|
T Consensus 78 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~f 152 (314)
T 1uir_A 78 PKRVLIVGGGEGATLREVLKHP--TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAY---LERTEERY 152 (314)
T ss_dssp CCEEEEEECTTSHHHHHHTTST--TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHH---HHHCCCCE
T ss_pred CCeEEEEcCCcCHHHHHHHhcC--CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHH---HHhcCCCc
Confidence 6799999999999999999864 567999999999999999998753 146899999998742 22236789
Q ss_pred eEEEehhhhhc---cChhH--HHHHHHHHHHhcCCCEEEEEEe
Q psy11741 182 DIVLLIFVLDA---INPNK--MQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 182 D~V~~~~~l~~---~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
|+|++....+. -+... ...+++.++++|+|||++++..
T Consensus 153 D~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 195 (314)
T 1uir_A 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQT 195 (314)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEc
Confidence 99999765443 11111 3688999999999999999964
No 214
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.40 E-value=4.6e-13 Score=117.93 Aligned_cols=115 Identities=14% Similarity=0.123 Sum_probs=85.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|..+..+++... ...+|+|+|+|+.+++.++++....+ .++.+..+|+...........++||+|+
T Consensus 83 ~g~~VLDlgaG~G~~t~~la~~~~-~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl 161 (274)
T 3ajd_A 83 EDDFILDMCAAPGGKTTHLAQLMK-NKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKIL 161 (274)
T ss_dssp TTCEEEETTCTTCHHHHHHHHHTT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CcCEEEEeCCCccHHHHHHHHHcC-CCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEE
Confidence 478999999999999999998762 23699999999999999999887644 4799999998642100000256899999
Q ss_pred ehh------hhhc---cC-------hhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 186 LIF------VLDA---IN-------PNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 186 ~~~------~l~~---~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
+.. ++.. .+ ...+..+++.+.++|||||.+++.+.+.
T Consensus 162 ~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 162 LDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 852 1110 00 1345789999999999999999987653
No 215
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.40 E-value=3.5e-13 Score=115.35 Aligned_cols=103 Identities=14% Similarity=0.125 Sum_probs=82.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCC----CCeEEEEEeCCHHHHHHHHhccccC------CCceEEEEecCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKN----DNVFVYGCDFSENAVNILKEHEEYK------PDRCHAFVCDVTSEDWNPPF 176 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~----~~~~v~gvD~s~~~l~~a~~~~~~~------~~~v~~~~~d~~~~~~~~~~ 176 (352)
++.+|||+|||+|.++..+++.... +..+|+++|+++.+++.|+++.... ..++.+..+|+... .+
T Consensus 84 ~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~---~~- 159 (227)
T 1r18_A 84 PGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKG---YP- 159 (227)
T ss_dssp TTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGC---CG-
T ss_pred CCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccC---CC-
Confidence 4789999999999999999886420 0258999999999999999886542 25799999998752 22
Q ss_pred CCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 177 APESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 177 ~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
..++||+|++...++++. +++.++|||||++++....
T Consensus 160 ~~~~fD~I~~~~~~~~~~--------~~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 160 PNAPYNAIHVGAAAPDTP--------TELINQLASGGRLIVPVGP 196 (227)
T ss_dssp GGCSEEEEEECSCBSSCC--------HHHHHTEEEEEEEEEEESC
T ss_pred cCCCccEEEECCchHHHH--------HHHHHHhcCCCEEEEEEec
Confidence 137899999999888773 6788999999999997643
No 216
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.39 E-value=9.1e-13 Score=113.64 Aligned_cols=107 Identities=22% Similarity=0.320 Sum_probs=84.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCC-----------CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSED-----------WNP 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~-----------~~~ 174 (352)
+.+|||+|||+|..+..+++.+. ++.+|+++|+++.+++.|++++...+ .++.+..+|+.+.. |..
T Consensus 61 ~~~VLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 61 AKRIIEIGTFTGYSSLCFASALP-EDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp CSEEEEECCTTCHHHHHHHHHSC-TTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred cCEEEEEeCCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 77999999999999999999763 36799999999999999999876543 35899999875410 111
Q ss_pred CCCC--CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 175 PFAP--ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 175 ~~~~--~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.+++ ++||+|++.... .+...+++.+.++|+|||++++.+.
T Consensus 140 ~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~pgG~lv~~~~ 182 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLKPGGLLIADNV 182 (239)
T ss_dssp TTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred cccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcCCCeEEEEEcc
Confidence 1233 789999987432 4567889999999999999999754
No 217
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.39 E-value=4e-12 Score=119.66 Aligned_cols=115 Identities=17% Similarity=0.260 Sum_probs=87.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
..++.+|||+|||+|..+..++..+. ...+|+|+|+|+.+++.+++++...+ .++.+.++|+.... ..+++++||+
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~-~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~--~~~~~~~fD~ 333 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMK-NKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAP--EIIGEEVADK 333 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTT-TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCS--SSSCSSCEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcC-CCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcc--hhhccCCCCE
Confidence 44578999999999999999999762 22699999999999999999987644 47999999987532 1134478999
Q ss_pred EEe------hhhhhccC-------hhH-------HHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 184 VLL------IFVLDAIN-------PNK-------MQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 184 V~~------~~~l~~~~-------~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
|++ ..++++.+ +.+ +..+++.+.++|||||.+++.+++.
T Consensus 334 Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~ 392 (450)
T 2yxl_A 334 VLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSI 392 (450)
T ss_dssp EEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 996 22333221 111 2678999999999999999987654
No 218
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.39 E-value=2.6e-12 Score=107.61 Aligned_cols=88 Identities=14% Similarity=0.169 Sum_probs=69.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..++.. +..+|+|+|+|+.|++.|+++.. ++.++++|+.+ + +++||+|+++
T Consensus 52 ~~~vlD~gcG~G~~~~~l~~~---~~~~v~~vD~~~~~~~~a~~~~~----~~~~~~~d~~~----~---~~~~D~v~~~ 117 (200)
T 1ne2_A 52 GRSVIDAGTGNGILACGSYLL---GAESVTAFDIDPDAIETAKRNCG----GVNFMVADVSE----I---SGKYDTWIMN 117 (200)
T ss_dssp TSEEEEETCTTCHHHHHHHHT---TBSEEEEEESCHHHHHHHHHHCT----TSEEEECCGGG----C---CCCEEEEEEC
T ss_pred CCEEEEEeCCccHHHHHHHHc---CCCEEEEEECCHHHHHHHHHhcC----CCEEEECcHHH----C---CCCeeEEEEC
Confidence 789999999999999999884 23479999999999999999875 68999999874 2 2689999999
Q ss_pred hhhhccChhHHHHHHHHHHHhc
Q psy11741 188 FVLDAINPNKMQHVINQVYKYL 209 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~L 209 (352)
..+++........+++++.+++
T Consensus 118 ~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 118 PPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp CCC-------CHHHHHHHHHHE
T ss_pred CCchhccCchhHHHHHHHHHhc
Confidence 8888885444457889999988
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.38 E-value=4.7e-13 Score=119.05 Aligned_cols=108 Identities=13% Similarity=0.165 Sum_probs=81.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++.. +..+|+++|+|+.+++.|++++.. ..++++++.+|+... ++..+++||
T Consensus 91 ~~~VLdiG~G~G~~~~~l~~~~--~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~---l~~~~~~fD 165 (296)
T 1inl_A 91 PKKVLIIGGGDGGTLREVLKHD--SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEY---VRKFKNEFD 165 (296)
T ss_dssp CCEEEEEECTTCHHHHHHTTST--TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHH---GGGCSSCEE
T ss_pred CCEEEEEcCCcCHHHHHHHhcC--CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHH---HhhCCCCce
Confidence 6799999999999999999864 457999999999999999998742 246899999997642 222357899
Q ss_pred EEEehhhhhccCh-h--HHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 183 IVLLIFVLDAINP-N--KMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 183 ~V~~~~~l~~~~~-~--~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|++.....++.+ . ....+++.++++|+|||++++...
T Consensus 166 ~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~ 206 (296)
T 1inl_A 166 VIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAETE 206 (296)
T ss_dssp EEEEEC----------CCSHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEcc
Confidence 9998533221211 1 226889999999999999999743
No 220
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.38 E-value=1e-12 Score=119.77 Aligned_cols=101 Identities=23% Similarity=0.369 Sum_probs=79.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+++|||||||+|.++..+|+. ...+|+|||.|+ |++.|++.++..+ .+|+++.+|+.+. .+ +++||+|+
T Consensus 84 ~k~VLDvG~GtGiLs~~Aa~a---GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~----~l-pe~~Dviv 154 (376)
T 4hc4_A 84 GKTVLDVGAGTGILSIFCAQA---GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETV----EL-PEQVDAIV 154 (376)
T ss_dssp TCEEEEETCTTSHHHHHHHHT---TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTC----CC-SSCEEEEE
T ss_pred CCEEEEeCCCccHHHHHHHHh---CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeee----cC-CccccEEE
Confidence 889999999999998877774 234899999996 8899988776543 6799999999853 33 36899999
Q ss_pred ehhhhhcc-ChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 186 LIFVLDAI-NPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 186 ~~~~l~~~-~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
+-.+-..+ ....+..++....++|+|||.++.
T Consensus 155 sE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP 187 (376)
T 4hc4_A 155 SEWMGYGLLHESMLSSVLHARTKWLKEGGLLLP 187 (376)
T ss_dssp CCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEES
T ss_pred eecccccccccchhhhHHHHHHhhCCCCceECC
Confidence 84433333 335778888889999999999885
No 221
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.38 E-value=3.7e-13 Score=118.91 Aligned_cols=105 Identities=18% Similarity=0.201 Sum_probs=80.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----------CCCceEEEEecCCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----------KPDRCHAFVCDVTSEDWNPPF 176 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----------~~~~v~~~~~d~~~~~~~~~~ 176 (352)
+.+|||||||+|.++..+++. +..+++++|+++.+++.|++++.. ..++++++.+|+.+. ++.
T Consensus 76 ~~~VLdiG~G~G~~~~~l~~~---~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~---l~~ 149 (281)
T 1mjf_A 76 PKRVLVIGGGDGGTVREVLQH---DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEF---IKN 149 (281)
T ss_dssp CCEEEEEECTTSHHHHHHTTS---CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHH---HHH
T ss_pred CCeEEEEcCCcCHHHHHHHhC---CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHH---hcc
Confidence 679999999999999999885 456999999999999999998711 246799999997641 112
Q ss_pred CCCcceEEEehhhhhccChhH--HHHHHHHHHHhcCCCEEEEEEe
Q psy11741 177 APESLDIVLLIFVLDAINPNK--MQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 177 ~~~~fD~V~~~~~l~~~~~~~--~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+++||+|++....+.-.... ...+++.++++|+|||++++..
T Consensus 150 -~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 193 (281)
T 1mjf_A 150 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQA 193 (281)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEE
T ss_pred -cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 56899999865432111122 2678999999999999999964
No 222
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.37 E-value=3.1e-12 Score=117.56 Aligned_cols=125 Identities=13% Similarity=0.107 Sum_probs=93.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..++... +..+|+|+|+|+.|++.|++++...+ .++.+.++|+.+ ++.++++||+|
T Consensus 217 ~~~~vLD~gCGsG~~~i~~a~~~--~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~----~~~~~~~fD~I 290 (373)
T 3tm4_A 217 DGGSVLDPMCGSGTILIELALRR--YSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQ----LSQYVDSVDFA 290 (373)
T ss_dssp CSCCEEETTCTTCHHHHHHHHTT--CCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGG----GGGTCSCEEEE
T ss_pred CCCEEEEccCcCcHHHHHHHHhC--CCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhh----CCcccCCcCEE
Confidence 37899999999999999999854 33489999999999999999987655 479999999984 44556899999
Q ss_pred Eehhhhhcc-----ChhH-HHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHH
Q psy11741 185 LLIFVLDAI-----NPNK-MQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVK 258 (352)
Q Consensus 185 ~~~~~l~~~-----~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (352)
+++-.++.. ...+ ...+++.+.++| ||.+++.. .+.+.+.
T Consensus 291 i~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~~~~i~--------------------------------~~~~~~~ 336 (373)
T 3tm4_A 291 ISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKRGVFIT--------------------------------TEKKAIE 336 (373)
T ss_dssp EEECCCC------CCHHHHHHHHHHHHHHHE--EEEEEEEE--------------------------------SCHHHHH
T ss_pred EECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCeEEEEE--------------------------------CCHHHHH
Confidence 996432211 0122 367888999988 45444432 2456677
Q ss_pred HHHHhCCCceEEe
Q psy11741 259 TMFESAGFVEKQN 271 (352)
Q Consensus 259 ~ll~~~Gf~~~~~ 271 (352)
..+.+.||.....
T Consensus 337 ~~~~~~G~~~~~~ 349 (373)
T 3tm4_A 337 EAIAENGFEIIHH 349 (373)
T ss_dssp HHHHHTTEEEEEE
T ss_pred HHHHHcCCEEEEE
Confidence 8889999997765
No 223
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.37 E-value=3.1e-13 Score=115.69 Aligned_cols=107 Identities=12% Similarity=0.132 Sum_probs=84.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCC--CCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFA--PESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~--~~~fD~ 183 (352)
+.+|||+|||+|..+..+++.+. ++.+|+++|+|+.+++.|++++...+ .++.+..+|+.+....++.. .++||+
T Consensus 70 ~~~vLdiG~G~G~~~~~la~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 70 AKKALDLGTFTGYSALALALALP-ADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp CCEEEEECCTTSHHHHHHHTTSC-TTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCEEEEEcCCccHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 67999999999999999998763 36799999999999999999876543 57999999875321011101 168999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
|++... ......+++.+.++|+|||++++.+.
T Consensus 149 v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 149 AVVDAD-----KENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp EEECSC-----STTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 998543 25667899999999999999999754
No 224
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.37 E-value=8.8e-13 Score=122.33 Aligned_cols=110 Identities=19% Similarity=0.132 Sum_probs=84.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC--ceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD--RCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|++++...+. ++.++++|+.+....+....++||+|+
T Consensus 218 ~~~VLDl~~G~G~~~~~la~~---g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi 294 (396)
T 2as0_A 218 GDRVLDVFTYTGGFAIHAAIA---GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVV 294 (396)
T ss_dssp TCEEEETTCTTTHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEE
Confidence 789999999999999999984 234899999999999999999876543 799999998642100001246899999
Q ss_pred ehh---------hhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 186 LIF---------VLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 186 ~~~---------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
+.- +.++. .....++..+.++|+|||.+++.+.+.
T Consensus 295 ~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~lv~~~~~~ 338 (396)
T 2as0_A 295 LDPPAFVQHEKDLKAGL--RAYFNVNFAGLNLVKDGGILVTCSCSQ 338 (396)
T ss_dssp ECCCCSCSSGGGHHHHH--HHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred ECCCCCCCCHHHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECCC
Confidence 842 12222 567789999999999999999876553
No 225
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.37 E-value=2e-12 Score=112.01 Aligned_cols=100 Identities=18% Similarity=0.162 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++. +.+++++|+|+.+++.|+++....+ .++.+...|+.+. ..++++||+|
T Consensus 91 ~~~~vldiG~G~G~~~~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~D~v 162 (248)
T 2yvl_A 91 KEKRVLEFGTGSGALLAVLSEV----AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDA----EVPEGIFHAA 162 (248)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTS----CCCTTCBSEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh----CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhc----ccCCCcccEE
Confidence 4789999999999999999985 5689999999999999999876543 5789999998742 1135689999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++. . .+...+++.+.++|+|||.+++....
T Consensus 163 ~~~-----~--~~~~~~l~~~~~~L~~gG~l~~~~~~ 192 (248)
T 2yvl_A 163 FVD-----V--REPWHYLEKVHKSLMEGAPVGFLLPT 192 (248)
T ss_dssp EEC-----S--SCGGGGHHHHHHHBCTTCEEEEEESS
T ss_pred EEC-----C--cCHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 972 2 35567899999999999999997643
No 226
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.37 E-value=1.4e-12 Score=109.80 Aligned_cols=101 Identities=18% Similarity=0.301 Sum_probs=82.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..++ ++..++|+|+++.|++.+++++...+.+..+..+|.... + +.++||+|++
T Consensus 105 ~p~~VLDlGCG~gpLal~~~-----~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~----~-~~~~~DvvLl 174 (253)
T 3frh_A 105 TPRRVLDIACGLNPLALYER-----GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCA----P-PAEAGDLALI 174 (253)
T ss_dssp CCSEEEEETCTTTHHHHHHT-----TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTS----C-CCCBCSEEEE
T ss_pred CCCeEEEecCCccHHHHHhc-----cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccC----C-CCCCcchHHH
Confidence 37899999999999988776 456899999999999999999877678889999998742 2 3569999999
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.-++|++........+ ++...|+++|+++-.
T Consensus 175 lk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsf 205 (253)
T 3frh_A 175 FKLLPLLEREQAGSAM-ALLQSLNTPRMAVSF 205 (253)
T ss_dssp ESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEE
T ss_pred HHHHHHhhhhchhhHH-HHHHHhcCCCEEEEc
Confidence 9999999444444444 888899999887764
No 227
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.36 E-value=2e-12 Score=114.33 Aligned_cols=101 Identities=22% Similarity=0.333 Sum_probs=80.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcc---e
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESL---D 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~f---D 182 (352)
+.+|||+|||+|.++..++.. ++.+|+|+|+|+.+++.|++++...+ .++.++++|+.+. + .++| |
T Consensus 124 ~~~vLDlG~GsG~~~~~la~~---~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~---~---~~~f~~~D 194 (284)
T 1nv8_A 124 IKTVADIGTGSGAIGVSVAKF---SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP---F---KEKFASIE 194 (284)
T ss_dssp CCEEEEESCTTSHHHHHHHHH---SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG---G---GGGTTTCC
T ss_pred CCEEEEEeCchhHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhh---c---ccccCCCC
Confidence 679999999999999999986 57899999999999999999987644 3599999998752 1 2578 9
Q ss_pred EEEehh------------hhhccC------hhHHHHHHHHHH-HhcCCCEEEEEE
Q psy11741 183 IVLLIF------------VLDAIN------PNKMQHVINQVY-KYLKPGGMVLFR 218 (352)
Q Consensus 183 ~V~~~~------------~l~~~~------~~~~~~~l~~~~-~~LkpgG~l~~~ 218 (352)
+|+++- +. |-+ ..+...+++++. +.|+|||++++.
T Consensus 195 ~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 195 MILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp EEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred EEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 999961 11 111 112237899999 999999999985
No 228
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.34 E-value=1.1e-11 Score=108.39 Aligned_cols=128 Identities=17% Similarity=0.233 Sum_probs=95.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.+++.+|+. ...+|+++|+|+.+++.+++|++.++ .++++.++|+.+. + ..+.||.|
T Consensus 125 ~g~~VlD~~aG~G~~~i~~a~~---g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~----~-~~~~~D~V 196 (278)
T 3k6r_A 125 PDELVVDMFAGIGHLSLPIAVY---GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDF----P-GENIADRI 196 (278)
T ss_dssp TTCEEEETTCTTTTTTHHHHHH---TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTC----C-CCSCEEEE
T ss_pred CCCEEEEecCcCcHHHHHHHHh---cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHh----c-cccCCCEE
Confidence 3889999999999999999885 44589999999999999999987644 5689999998753 2 35789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESA 264 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 264 (352)
++... .....++..+.++|+|||++.+.+....... .....+.+..+.++.
T Consensus 197 i~~~p------~~~~~~l~~a~~~lk~gG~ih~~~~~~e~~~-----------------------~~~~~e~i~~~~~~~ 247 (278)
T 3k6r_A 197 LMGYV------VRTHEFIPKALSIAKDGAIIHYHNTVPEKLM-----------------------PREPFETFKRITKEY 247 (278)
T ss_dssp EECCC------SSGGGGHHHHHHHEEEEEEEEEEEEEEGGGT-----------------------TTTTHHHHHHHHHHT
T ss_pred EECCC------CcHHHHHHHHHHHcCCCCEEEEEeeeccccc-----------------------chhHHHHHHHHHHHc
Confidence 87532 2223566777899999999887654321100 012356778888999
Q ss_pred CCceEEe
Q psy11741 265 GFVEKQN 271 (352)
Q Consensus 265 Gf~~~~~ 271 (352)
|+.+...
T Consensus 248 g~~v~~~ 254 (278)
T 3k6r_A 248 GYDVEKL 254 (278)
T ss_dssp TCEEEEE
T ss_pred CCcEEEE
Confidence 9987544
No 229
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.34 E-value=2.2e-12 Score=119.67 Aligned_cols=109 Identities=17% Similarity=0.125 Sum_probs=84.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC---ceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD---RCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||+|||+|.++..++.. ...+|+|+|+|+.+++.|++++...+. +++++++|+.+....+....++||+|
T Consensus 221 ~~~VLDl~cG~G~~sl~la~~---g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 221 NKRVLNCFSYTGGFAVSALMG---GCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp TCEEEEESCTTCSHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCeEEEeeccCCHHHHHHHHC---CCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 789999999999999999984 234899999999999999999876544 79999999874210010114689999
Q ss_pred Eehhh---------hhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIFV---------LDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++.-- .... ..+..++..+.++|+|||++++.+..
T Consensus 298 i~dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 298 VMDPPKFVENKSQLMGAC--RGYKDINMLAIQLLNEGGILLTFSCS 341 (396)
T ss_dssp EECCSSTTTCSSSSSCCC--THHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EECCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCcEEEEEeCC
Confidence 98521 1111 57788999999999999999997654
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.34 E-value=2.1e-12 Score=120.80 Aligned_cols=113 Identities=13% Similarity=0.139 Sum_probs=85.3
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+|||+|..+..+++.+. ....|+|+|+|+.+++.+++++...+..+.+.++|+.... ...+++||+|+
T Consensus 100 ~~g~~VLDlgaGpG~kt~~LA~~~~-~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~---~~~~~~FD~Il 175 (464)
T 3m6w_A 100 KPGERVLDLAAAPGGKTTHLAARMG-GKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALA---EAFGTYFHRVL 175 (464)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHTT-TCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHH---HHHCSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhh---hhccccCCEEE
Confidence 3588999999999999999998764 3358999999999999999998765434888888876421 11257899999
Q ss_pred eh------hhhhc-------cChh-------HHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 186 LI------FVLDA-------INPN-------KMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 186 ~~------~~l~~-------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
+. .++.. .+++ .+..+|+.+.++|||||+|+.++.+.
T Consensus 176 ~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~ 232 (464)
T 3m6w_A 176 LDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTF 232 (464)
T ss_dssp EECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCC
T ss_pred ECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 61 12211 1111 23789999999999999999987654
No 231
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.33 E-value=2.8e-12 Score=106.58 Aligned_cols=101 Identities=20% Similarity=0.244 Sum_probs=72.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC---C-CC---CC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP---P-FA---PE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~---~-~~---~~ 179 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+++.. ...++.++++|+.+..... . +. .+
T Consensus 25 ~g~~VLDlG~G~G~~s~~la~----~~~~V~gvD~~~~~----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~ 90 (191)
T 3dou_A 25 KGDAVIEIGSSPGGWTQVLNS----LARKIISIDLQEME----------EIAGVRFIRCDIFKETIFDDIDRALREEGIE 90 (191)
T ss_dssp TTCEEEEESCTTCHHHHHHTT----TCSEEEEEESSCCC----------CCTTCEEEECCTTSSSHHHHHHHHHHHHTCS
T ss_pred CCCEEEEEeecCCHHHHHHHH----cCCcEEEEeccccc----------cCCCeEEEEccccCHHHHHHHHHHhhcccCC
Confidence 378999999999999999988 46699999999741 1256899999997531000 0 00 14
Q ss_pred cceEEEehhhhh--------cc-ChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 180 SLDIVLLIFVLD--------AI-NPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 180 ~fD~V~~~~~l~--------~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+||+|++..... +. .......+++.+.++|||||.|++..+.
T Consensus 91 ~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 91 KVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp SEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 899999954221 11 1123467889999999999999987654
No 232
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.33 E-value=1.8e-12 Score=127.94 Aligned_cols=106 Identities=13% Similarity=0.160 Sum_probs=84.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC---CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP---DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||+|||+|.++..++.. ...+|+++|+|+.+++.|++++...+ .++.++++|+.+ .++...++||+|
T Consensus 540 g~~VLDlg~GtG~~sl~aa~~---ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~---~l~~~~~~fD~I 613 (703)
T 3v97_A 540 GKDFLNLFSYTGSATVHAGLG---GARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLA---WLREANEQFDLI 613 (703)
T ss_dssp TCEEEEESCTTCHHHHHHHHT---TCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHH---HHHHCCCCEEEE
T ss_pred CCcEEEeeechhHHHHHHHHC---CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHH---HHHhcCCCccEE
Confidence 789999999999999998873 23369999999999999999987654 369999999875 122335789999
Q ss_pred Eehh-----------hhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIF-----------VLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~-----------~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++.- ++... .+...++..+.++|+|||+|++....
T Consensus 614 i~DPP~f~~~~~~~~~~~~~--~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 614 FIDPPTFSNSKRMEDAFDVQ--RDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp EECCCSBC-------CCBHH--HHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EECCccccCCccchhHHHHH--HHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 9843 12222 57788999999999999999987543
No 233
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.31 E-value=2e-12 Score=119.29 Aligned_cols=108 Identities=17% Similarity=0.099 Sum_probs=83.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||+|||+|.++..++.. ..+|+|+|+|+.+++.|++++...+ .++.++++|+.+....+...+++||+|++
T Consensus 210 ~~~VLDlg~G~G~~~~~la~~----~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 210 GERALDVFSYAGGFALHLALG----FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp EEEEEEETCTTTHHHHHHHHH----EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCeEEEeeeccCHHHHHHHHh----CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 779999999999999999984 4589999999999999999987644 45899999987421000011468999998
Q ss_pred hhh---------hhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 187 IFV---------LDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 187 ~~~---------l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
.-- .... .....++..+.++|+|||++++.+..
T Consensus 286 dpP~~~~~~~~~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~~~ 327 (382)
T 1wxx_A 286 DPPAFAKGKKDVERAY--RAYKEVNLRAIKLLKEGGILATASCS 327 (382)
T ss_dssp CCCCSCCSTTSHHHHH--HHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCCCCCChhHHHHHH--HHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 321 1112 56778999999999999999998654
No 234
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.31 E-value=5.7e-12 Score=117.99 Aligned_cols=114 Identities=15% Similarity=0.190 Sum_probs=87.8
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
..++.+|||+|||+|..+..+++.. ++.+|+|+|+|+.+++.+++++...+.++.+.++|+.... ..+++++||+|
T Consensus 244 ~~~g~~VLDlgaG~G~~t~~la~~~--~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~--~~~~~~~fD~V 319 (429)
T 1sqg_A 244 PQNGEHILDLCAAPGGKTTHILEVA--PEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPS--QWCGEQQFDRI 319 (429)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHC--TTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTH--HHHTTCCEEEE
T ss_pred CCCcCeEEEECCCchHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhch--hhcccCCCCEE
Confidence 4458899999999999999999976 4579999999999999999998766667889999987421 00345789999
Q ss_pred Eeh------hhhhccC-------hhH-------HHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 185 LLI------FVLDAIN-------PNK-------MQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 185 ~~~------~~l~~~~-------~~~-------~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
++. .++++.+ +.+ +..+++.+.++|||||++++.+.+.
T Consensus 320 l~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~ 377 (429)
T 1sqg_A 320 LLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSV 377 (429)
T ss_dssp EEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCC
T ss_pred EEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCC
Confidence 962 2333221 111 2588999999999999999987654
No 235
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.30 E-value=3.5e-12 Score=112.77 Aligned_cols=99 Identities=20% Similarity=0.316 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++....+ .+++++++|+.+. ++ .+||+|
T Consensus 28 ~~~~VLDiG~G~G~lt~~L~~~----~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~----~~--~~fD~v 97 (285)
T 1zq9_A 28 PTDVVLEVGPGTGNMTVKLLEK----AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKT----DL--PFFDTC 97 (285)
T ss_dssp TTCEEEEECCTTSTTHHHHHHH----SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTS----CC--CCCSEE
T ss_pred CCCEEEEEcCcccHHHHHHHhh----CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecc----cc--hhhcEE
Confidence 3789999999999999999984 4589999999999999999875432 4799999999743 22 279999
Q ss_pred EehhhhhccChhHHHHHH--------------HHH--HHhcCCCEEEE
Q psy11741 185 LLIFVLDAINPNKMQHVI--------------NQV--YKYLKPGGMVL 216 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l--------------~~~--~~~LkpgG~l~ 216 (352)
+++...+.. .+-...++ +++ +++|+|||.++
T Consensus 98 v~nlpy~~~-~~~~~~~l~~~~~~~~~~~m~qkEva~r~vlkPGg~~y 144 (285)
T 1zq9_A 98 VANLPYQIS-SPFVFKLLLHRPFFRCAILMFQREFALRLVAKPGDKLY 144 (285)
T ss_dssp EEECCGGGH-HHHHHHHHHCSSCCSEEEEEEEHHHHHHHHCCTTCTTC
T ss_pred EEecCcccc-hHHHHHHHhcCcchhhhhhhhhHHHHHHHhcCCCCccc
Confidence 996443322 12222332 222 36899999764
No 236
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.30 E-value=3.4e-12 Score=119.20 Aligned_cols=114 Identities=12% Similarity=0.148 Sum_probs=85.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
..++.+|||+|||+|..+..+++.+. ....|+++|+|+.+++.+++++...+ .++.+..+|+.... ...+++||+
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~-~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~---~~~~~~FD~ 178 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMK-GKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELV---PHFSGFFDR 178 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHT-TCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHH---HHHTTCEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhh---hhccccCCE
Confidence 34588999999999999999998763 34689999999999999999987643 56888888876421 112578999
Q ss_pred EEehh------hhhc-------cCh-------hHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 184 VLLIF------VLDA-------INP-------NKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 184 V~~~~------~l~~-------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
|++.. ++.. .++ ..+..+|..+.++|||||+|+.++.+.
T Consensus 179 Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~ 237 (456)
T 3m4x_A 179 IVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTF 237 (456)
T ss_dssp EEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred EEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeec
Confidence 99732 1111 011 123478999999999999999987654
No 237
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.30 E-value=4.5e-12 Score=105.61 Aligned_cols=104 Identities=18% Similarity=0.235 Sum_probs=73.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCC--------eEEEEEeCCHHHHHHHHhccccCCCceEEE-EecCCCCCCC----C
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDN--------VFVYGCDFSENAVNILKEHEEYKPDRCHAF-VCDVTSEDWN----P 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~--------~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~-~~d~~~~~~~----~ 174 (352)
+.+|||+|||+|.++..+++..+ .. .+|+|+|+|+.+ ...++.+. .+|+...... .
T Consensus 23 ~~~vLDlGcG~G~~~~~la~~~~-~~~~~~~~~~~~v~~vD~s~~~----------~~~~~~~~~~~d~~~~~~~~~~~~ 91 (196)
T 2nyu_A 23 GLRVLDCGAAPGAWSQVAVQKVN-AAGTDPSSPVGFVLGVDLLHIF----------PLEGATFLCPADVTDPRTSQRILE 91 (196)
T ss_dssp TCEEEEETCCSCHHHHHHHHHTT-TTCCCTTSCCCEEEEECSSCCC----------CCTTCEEECSCCTTSHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHhc-cccccccCCCceEEEEechhcc----------cCCCCeEEEeccCCCHHHHHHHHH
Confidence 78999999999999999999763 21 689999999831 11457888 8887632100 0
Q ss_pred CCCCCcceEEEehhhhhccC--hhHH-------HHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 175 PFAPESLDIVLLIFVLDAIN--PNKM-------QHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 175 ~~~~~~fD~V~~~~~l~~~~--~~~~-------~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
.+++++||+|++...++... ..+. ..+++++.++|+|||.+++..+..
T Consensus 92 ~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~ 148 (196)
T 2nyu_A 92 VLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAG 148 (196)
T ss_dssp HSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred hcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 12346899999865443210 0122 578999999999999999986543
No 238
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=99.30 E-value=8.4e-13 Score=115.87 Aligned_cols=102 Identities=17% Similarity=0.135 Sum_probs=74.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc---CCCceEEE--EecCCCCCCCCCCCCCcc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY---KPDRCHAF--VCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~---~~~~v~~~--~~d~~~~~~~~~~~~~~f 181 (352)
++.+|||+|||+|.++..+++. .+|+|+|+|+ |+..++++... .+.++.++ ++|+.. ++ +++|
T Consensus 82 ~g~~VLDlGcGtG~~s~~la~~-----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~----l~--~~~f 149 (276)
T 2wa2_A 82 LKGTVVDLGCGRGSWSYYAASQ-----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTK----ME--PFQA 149 (276)
T ss_dssp CCEEEEEESCTTCHHHHHHHTS-----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGG----CC--CCCC
T ss_pred CCCEEEEeccCCCHHHHHHHHc-----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhh----CC--CCCc
Confidence 4789999999999999999884 4799999999 65444332111 11268899 889874 33 6789
Q ss_pred eEEEehhhhhccCh---hHH--HHHHHHHHHhcCCCE--EEEEEeCC
Q psy11741 182 DIVLLIFVLDAINP---NKM--QHVINQVYKYLKPGG--MVLFRDYG 221 (352)
Q Consensus 182 D~V~~~~~l~~~~~---~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 221 (352)
|+|+|..+ ++... +.. ..+|+.+.++||||| .|++..+.
T Consensus 150 D~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 150 DTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEeCC
Confidence 99999766 33211 111 147899999999999 99997665
No 239
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=7.9e-12 Score=117.96 Aligned_cols=111 Identities=17% Similarity=0.291 Sum_probs=85.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCC-CCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPF-APESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~-~~~~fD~V 184 (352)
++.+|||+|||+|..+..+++.+. ....|+|+|+|+.+++.+++++...+ .++.+.++|+.. ++. .+++||.|
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~-~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~----~~~~~~~~fD~I 191 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMN-NEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRV----FGAAVPEMFDAI 191 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTT-TCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTT----HHHHSTTCEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHH----hhhhccccCCEE
Confidence 488999999999999999999763 34689999999999999999987543 478999999874 221 35789999
Q ss_pred Eeh------hhhhcc-------Ch-------hHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 185 LLI------FVLDAI-------NP-------NKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 185 ~~~------~~l~~~-------~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
++. .++... ++ ..+..+|..+.++|||||+|++.+.+.
T Consensus 192 l~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~ 249 (479)
T 2frx_A 192 LLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTL 249 (479)
T ss_dssp EEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccC
Confidence 972 122211 11 124578999999999999999987654
No 240
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=99.27 E-value=1.2e-12 Score=114.25 Aligned_cols=102 Identities=13% Similarity=0.109 Sum_probs=73.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccc---cCCCceEEE--EecCCCCCCCCCCCCCcc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEE---YKPDRCHAF--VCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~---~~~~~v~~~--~~d~~~~~~~~~~~~~~f 181 (352)
++.+|||||||+|.++..+++. .+|+|+|+|+ |+..+++... ..+.++.++ ++|+.. ++ +++|
T Consensus 74 ~g~~VLDlGcGtG~~s~~la~~-----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~----l~--~~~f 141 (265)
T 2oxt_A 74 LTGRVVDLGCGRGGWSYYAASR-----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHT----LP--VERT 141 (265)
T ss_dssp CCEEEEEESCTTSHHHHHHHTS-----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTT----SC--CCCC
T ss_pred CCCEEEEeCcCCCHHHHHHHHc-----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhH----CC--CCCC
Confidence 4789999999999999998884 4799999999 6433322211 111268888 889874 33 6789
Q ss_pred eEEEehhhhhccCh---hHH--HHHHHHHHHhcCCCE--EEEEEeCC
Q psy11741 182 DIVLLIFVLDAINP---NKM--QHVINQVYKYLKPGG--MVLFRDYG 221 (352)
Q Consensus 182 D~V~~~~~l~~~~~---~~~--~~~l~~~~~~LkpgG--~l~~~~~~ 221 (352)
|+|+|..+ ++... +.. ..+|..+.++|+||| .|++..+.
T Consensus 142 D~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 142 DVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred cEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeCC
Confidence 99999766 33211 111 138899999999999 99997665
No 241
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.27 E-value=3.2e-11 Score=109.71 Aligned_cols=108 Identities=18% Similarity=0.295 Sum_probs=84.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC---CCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN---DNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~---~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+|||+|||+|.++..+++.+.. ...+++|+|+++.+++.|+.+....+.++.+.++|.... ...++||+|
T Consensus 131 ~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~-----~~~~~fD~I 205 (344)
T 2f8l_A 131 NVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLAN-----LLVDPVDVV 205 (344)
T ss_dssp EEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSC-----CCCCCEEEE
T ss_pred CCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCc-----cccCCccEE
Confidence 679999999999999999887631 127899999999999999998765445688999998642 235789999
Q ss_pred EehhhhhccChhHH----------------HHHHHHHHHhcCCCEEEEEEeC
Q psy11741 185 LLIFVLDAINPNKM----------------QHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 185 ~~~~~l~~~~~~~~----------------~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+++-.+++++.++. ..++..+.+.|+|||++++..+
T Consensus 206 i~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p 257 (344)
T 2f8l_A 206 ISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVP 257 (344)
T ss_dssp EEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 99876655532221 2689999999999999998754
No 242
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.27 E-value=1.3e-11 Score=111.69 Aligned_cols=97 Identities=15% Similarity=0.314 Sum_probs=79.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+|||+|.++.. ++ .+.+|+|+|+|+.+++.|++++...+ .++.++++|+.+. . ++||+|
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~----~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~----~---~~fD~V 262 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK----NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREV----D---VKGNRV 262 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT----TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGC----C---CCEEEE
T ss_pred CCCEEEEccCccCHHHHh-cc----CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHh----c---CCCcEE
Confidence 378999999999999998 77 56699999999999999999987654 4799999999752 1 789999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++.-. .....++..+.++|+|||.+++.++.
T Consensus 263 i~dpP------~~~~~~l~~~~~~L~~gG~l~~~~~~ 293 (336)
T 2yx1_A 263 IMNLP------KFAHKFIDKALDIVEEGGVIHYYTIG 293 (336)
T ss_dssp EECCT------TTGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EECCc------HhHHHHHHHHHHHcCCCCEEEEEEee
Confidence 98521 22237888899999999999987654
No 243
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.25 E-value=7.6e-12 Score=109.02 Aligned_cols=94 Identities=11% Similarity=0.061 Sum_probs=77.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+.+|||||||+|..+..+++. + .+|+++|+++.+++.|++++.. ..++++++.+|+... . ++||
T Consensus 73 ~~~VL~iG~G~G~~~~~ll~~---~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~------~-~~fD 141 (262)
T 2cmg_A 73 LKEVLIVDGFDLELAHQLFKY---D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLD------I-KKYD 141 (262)
T ss_dssp CCEEEEESSCCHHHHHHHTTS---S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSC------C-CCEE
T ss_pred CCEEEEEeCCcCHHHHHHHhC---C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHH------H-hhCC
Confidence 679999999999999988885 3 6999999999999999987643 246799999998742 1 7899
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|++.. .++..+++.++++|+|||++++..
T Consensus 142 ~Ii~d~-------~dp~~~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 142 LIFCLQ-------EPDIHRIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp EEEESS-------CCCHHHHHHHHTTEEEEEEEEEEE
T ss_pred EEEECC-------CChHHHHHHHHHhcCCCcEEEEEc
Confidence 999852 122348999999999999999964
No 244
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=99.24 E-value=2.2e-11 Score=107.14 Aligned_cols=117 Identities=8% Similarity=0.102 Sum_probs=82.2
Q ss_pred CCCeEEEEcCCc------cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEE-EEecCCCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGV------GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHA-FVCDVTSEDWNPPFAPE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~------G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~-~~~d~~~~~~~~~~~~~ 179 (352)
++.+|||+|||+ |. ..+++..+ ++.+|+|+|+|+. . .++++ +++|+.+. ++ .+
T Consensus 63 ~g~~VLDLGcGsg~~~GpGs--~~~a~~~~-~~~~V~gvDis~~--------v----~~v~~~i~gD~~~~----~~-~~ 122 (290)
T 2xyq_A 63 YNMRVIHFGAGSDKGVAPGT--AVLRQWLP-TGTLLVDSDLNDF--------V----SDADSTLIGDCATV----HT-AN 122 (290)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSC-TTCEEEEEESSCC--------B----CSSSEEEESCGGGC----CC-SS
T ss_pred CCCEEEEeCCCCCCCCCcHH--HHHHHHcC-CCCEEEEEECCCC--------C----CCCEEEEECccccC----Cc-cC
Confidence 478999999955 55 44455442 3679999999997 1 25788 99999853 22 36
Q ss_pred cceEEEehhhhhc--------c-ChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeee
Q psy11741 180 SLDIVLLIFVLDA--------I-NPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVY 250 (352)
Q Consensus 180 ~fD~V~~~~~l~~--------~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (352)
+||+|++....+. . .......+++.+.++|||||.|++..+..
T Consensus 123 ~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~~---------------------------- 174 (290)
T 2xyq_A 123 KWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITEH---------------------------- 174 (290)
T ss_dssp CEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECSS----------------------------
T ss_pred cccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEecc----------------------------
Confidence 8999999643211 1 12345689999999999999999975432
Q ss_pred ccCHHHHHHHHHhCCCceEEee
Q psy11741 251 FFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 251 ~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
....++..++++.||..+...
T Consensus 175 -~~~~~l~~~l~~~GF~~v~~~ 195 (290)
T 2xyq_A 175 -SWNADLYKLMGHFSWWTAFVT 195 (290)
T ss_dssp -SCCHHHHHHHTTEEEEEEEEE
T ss_pred -CCHHHHHHHHHHcCCcEEEEE
Confidence 123467888888898766543
No 245
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.22 E-value=1.4e-10 Score=108.54 Aligned_cols=102 Identities=21% Similarity=0.320 Sum_probs=77.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++ .+.+|+|+|+|+.+++.|++++...+ .++.+.++|+.+....+++.+++||+|+
T Consensus 286 ~~~~VLDlgcG~G~~~~~la~----~~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 286 PEDRVLDLFCGMGNFTLPLAT----QAASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp TTCEEEEESCTTTTTHHHHHT----TSSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCEEEECCCCCCHHHHHHHh----hCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 367999999999999999998 45699999999999999999986544 4799999999864322345567899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+.---.. ...+++.+.+ ++|+++++++
T Consensus 362 ~dPPr~g-----~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 362 LDPARAG-----AAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp ECCCTTC-----CHHHHHHHHH-HCCSEEEEEE
T ss_pred ECCCCcc-----HHHHHHHHHh-cCCCeEEEEE
Confidence 8432111 1234555443 7899998886
No 246
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=99.20 E-value=9.5e-12 Score=110.83 Aligned_cols=103 Identities=15% Similarity=0.097 Sum_probs=72.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC----CHHHHHHHHhccccC-CCceEEEEe-cCCCCCCCCCCCCCc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF----SENAVNILKEHEEYK-PDRCHAFVC-DVTSEDWNPPFAPES 180 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~----s~~~l~~a~~~~~~~-~~~v~~~~~-d~~~~~~~~~~~~~~ 180 (352)
++.+|||||||+|.++..+++. .+|+|+|+ ++.+++.+. .... .+++.+.++ |+.. + +.++
T Consensus 82 ~g~~VLDlGcG~G~~s~~la~~-----~~V~gvD~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~D~~~----l--~~~~ 148 (305)
T 2p41_A 82 PEGKVVDLGCGRGGWSYYCGGL-----KNVREVKGLTKGGPGHEEPIP--MSTYGWNLVRLQSGVDVFF----I--PPER 148 (305)
T ss_dssp CCEEEEEETCTTSHHHHHHHTS-----TTEEEEEEECCCSTTSCCCCC--CCSTTGGGEEEECSCCTTT----S--CCCC
T ss_pred CCCEEEEEcCCCCHHHHHHHhc-----CCEEEEeccccCchhHHHHHH--hhhcCCCCeEEEecccccc----C--CcCC
Confidence 4789999999999999999884 37999999 565442111 1111 146888888 8763 2 2568
Q ss_pred ceEEEehhhhh---cc-ChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 181 LDIVLLIFVLD---AI-NPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 181 fD~V~~~~~l~---~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
||+|+|..+++ +. +......+|..+.++|||||.|++..+..
T Consensus 149 fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 149 CDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp CSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 99999976543 11 01111257899999999999999976654
No 247
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.19 E-value=6.5e-11 Score=105.33 Aligned_cols=94 Identities=18% Similarity=0.208 Sum_probs=65.9
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP- 157 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~- 157 (352)
.|..+..+....+..+.. .++.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|+++....+
T Consensus 23 ~fl~~~~i~~~i~~~~~~---------~~~~~VLDiG~G~G~lt~~La~----~~~~v~~vDi~~~~~~~a~~~~~~~~~ 89 (299)
T 2h1r_A 23 HLLKNPGILDKIIYAAKI---------KSSDIVLEIGCGTGNLTVKLLP----LAKKVITIDIDSRMISEVKKRCLYEGY 89 (299)
T ss_dssp CEECCHHHHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHTT----TSSEEEEECSCHHHHHHHHHHHHHTTC
T ss_pred ceecCHHHHHHHHHhcCC---------CCcCEEEEEcCcCcHHHHHHHh----cCCEEEEEECCHHHHHHHHHHHHHcCC
Confidence 455555555444443322 2378999999999999999998 45699999999999999999875433
Q ss_pred CceEEEEecCCCCCCCCCCCCCcceEEEehhhhh
Q psy11741 158 DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLD 191 (352)
Q Consensus 158 ~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~ 191 (352)
.+++++.+|+.+. + ..+||+|+++...+
T Consensus 90 ~~v~~~~~D~~~~----~--~~~~D~Vv~n~py~ 117 (299)
T 2h1r_A 90 NNLEVYEGDAIKT----V--FPKFDVCTANIPYK 117 (299)
T ss_dssp CCEEC----CCSS----C--CCCCSEEEEECCGG
T ss_pred CceEEEECchhhC----C--cccCCEEEEcCCcc
Confidence 5799999998742 2 24899999865443
No 248
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.13 E-value=2.5e-10 Score=106.26 Aligned_cols=97 Identities=19% Similarity=0.205 Sum_probs=74.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++ .+.+|+|+|+|+.|++.|++++...+..+.+.++|+.+. + ..+||+|++.
T Consensus 291 ~~~VLDlgcG~G~~sl~la~----~~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~---~---~~~fD~Vv~d 360 (425)
T 2jjq_A 291 GEKILDMYSGVGTFGIYLAK----RGFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASDREV---S---VKGFDTVIVD 360 (425)
T ss_dssp SSEEEEETCTTTHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCTTTC---C---CTTCSEEEEC
T ss_pred CCEEEEeeccchHHHHHHHH----cCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECChHHc---C---ccCCCEEEEc
Confidence 67999999999999999998 556999999999999999999875443389999999753 1 1289999984
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
-.-..+ ...+++.+. .|+|||+++++.
T Consensus 361 PPr~g~----~~~~~~~l~-~l~p~givyvsc 387 (425)
T 2jjq_A 361 PPRAGL----HPRLVKRLN-REKPGVIVYVSC 387 (425)
T ss_dssp CCTTCS----CHHHHHHHH-HHCCSEEEEEES
T ss_pred CCccch----HHHHHHHHH-hcCCCcEEEEEC
Confidence 332111 123455554 489999999963
No 249
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=99.12 E-value=7.9e-10 Score=100.46 Aligned_cols=164 Identities=15% Similarity=0.229 Sum_probs=102.1
Q ss_pred CCeEEEEcCCccccHHHHHhhc-------------CCCCeEEEEEeCCHHHHHHHHhcccc-------------CCCceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHC-------------KNDNVFVYGCDFSENAVNILKEHEEY-------------KPDRCH 161 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~-------------~~~~~~v~gvD~s~~~l~~a~~~~~~-------------~~~~v~ 161 (352)
+.+|+|+|||+|..+..++... ..+..+|...|+........=+.+.. ...+.-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 6789999999999988873321 12678899999876654332111111 001112
Q ss_pred EEEecCCCCCCCCCCCCCcceEEEehhhhhccC--h----------------------------------hHHHHHHHHH
Q psy11741 162 AFVCDVTSEDWNPPFAPESLDIVLLIFVLDAIN--P----------------------------------NKMQHVINQV 205 (352)
Q Consensus 162 ~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~--~----------------------------------~~~~~~l~~~ 205 (352)
|..+.....- ...+++++||+|+++.++|+++ + .|+..+|+..
T Consensus 133 f~~gvpgSFy-~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~r 211 (374)
T 3b5i_A 133 FVAGVPGSFY-RRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRAR 211 (374)
T ss_dssp EEEEEESCTT-SCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhh-cccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333221 2346789999999999999995 2 1667789999
Q ss_pred HHhcCCCEEEEEEeCCCCchh-------------hHh-----hhcCccccCceeecCCCeeeeccCHHHHHHHHH-hCCC
Q psy11741 206 YKYLKPGGMVLFRDYGRYDLV-------------QLR-----FKKGRCLQDNFYARGDGTLVYFFTREEVKTMFE-SAGF 266 (352)
Q Consensus 206 ~~~LkpgG~l~~~~~~~~~~~-------------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~-~~Gf 266 (352)
++.|+|||.+++...+..+.. .+. +.....+....+. .-....++.+.+++..+++ +.||
T Consensus 212 a~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d-~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 212 AAEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRD-GFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHS-SCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcc-cCCccccCCCHHHHHHHHHhcCCc
Confidence 999999999999887664321 010 0001111111100 0123456789999999998 5999
Q ss_pred ceEEeee
Q psy11741 267 VEKQNLI 273 (352)
Q Consensus 267 ~~~~~~~ 273 (352)
.+.....
T Consensus 291 ~I~~le~ 297 (374)
T 3b5i_A 291 AIDKLVV 297 (374)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9887754
No 250
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.11 E-value=2.9e-10 Score=100.37 Aligned_cols=94 Identities=14% Similarity=0.141 Sum_probs=72.1
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
.|..+..+....+..+.. .++.+|||||||+|.++..+++. +.+|+|+|+++.|++.+++++.. ..
T Consensus 31 nfL~d~~i~~~Iv~~l~~---------~~~~~VLEIG~G~G~lT~~La~~----~~~V~aVEid~~li~~a~~~~~~-~~ 96 (295)
T 3gru_A 31 CFLIDKNFVNKAVESANL---------TKDDVVLEIGLGKGILTEELAKN----AKKVYVIEIDKSLEPYANKLKEL-YN 96 (295)
T ss_dssp CEECCHHHHHHHHHHTTC---------CTTCEEEEECCTTSHHHHHHHHH----SSEEEEEESCGGGHHHHHHHHHH-CS
T ss_pred cccCCHHHHHHHHHhcCC---------CCcCEEEEECCCchHHHHHHHhc----CCEEEEEECCHHHHHHHHHHhcc-CC
Confidence 466666665555544322 23789999999999999999984 56899999999999999998763 36
Q ss_pred ceEEEEecCCCCCCCCCCCCCcceEEEehhhh
Q psy11741 159 RCHAFVCDVTSEDWNPPFAPESLDIVLLIFVL 190 (352)
Q Consensus 159 ~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l 190 (352)
+++++++|+.+ +++++.+||.|+++...
T Consensus 97 ~v~vi~gD~l~----~~~~~~~fD~Iv~NlPy 124 (295)
T 3gru_A 97 NIEIIWGDALK----VDLNKLDFNKVVANLPY 124 (295)
T ss_dssp SEEEEESCTTT----SCGGGSCCSEEEEECCG
T ss_pred CeEEEECchhh----CCcccCCccEEEEeCcc
Confidence 79999999984 34455679999986443
No 251
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.10 E-value=6.1e-12 Score=108.87 Aligned_cols=102 Identities=13% Similarity=0.094 Sum_probs=72.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC-CCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA-PESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.|+++.. ...+++++++|+.+ ++++ +++| .|+
T Consensus 29 ~~~~VLDiG~G~G~~~~~l~~~----~~~v~~id~~~~~~~~a~~~~~-~~~~v~~~~~D~~~----~~~~~~~~f-~vv 98 (245)
T 1yub_A 29 ETDTVYEIGTGKGHLTTKLAKI----SKQVTSIELDSHLFNLSSEKLK-LNTRVTLIHQDILQ----FQFPNKQRY-KIV 98 (245)
T ss_dssp SSEEEEECSCCCSSCSHHHHHH----SSEEEESSSSCSSSSSSSCTTT-TCSEEEECCSCCTT----TTCCCSSEE-EEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHh----CCeEEEEECCHHHHHHHHHHhc-cCCceEEEECChhh----cCcccCCCc-EEE
Confidence 3779999999999999999984 4689999999999999988765 33679999999984 3333 3678 555
Q ss_pred ehhhhhccChhH----------HHHHH----HHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNK----------MQHVI----NQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~----------~~~~l----~~~~~~LkpgG~l~~~~ 219 (352)
++-- .+.+... ...++ +.+.++|+|||.+.+..
T Consensus 99 ~n~P-y~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v~~ 145 (245)
T 1yub_A 99 GNIP-YHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGLLL 145 (245)
T ss_dssp EECC-SSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHHHT
T ss_pred EeCC-ccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhhhh
Confidence 5321 1111111 12233 66889999999877643
No 252
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.09 E-value=2.3e-10 Score=98.76 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=50.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS 169 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 169 (352)
++.+|||+|||+|.++..+++. +.+|+|+|+|+.|++.++++.... .+++++++|+.+
T Consensus 30 ~~~~VLDiG~G~G~lt~~l~~~----~~~v~~vD~~~~~~~~a~~~~~~~-~~v~~~~~D~~~ 87 (244)
T 1qam_A 30 EHDNIFEIGSGKGHFTLELVQR----CNFVTAIEIDHKLCKTTENKLVDH-DNFQVLNKDILQ 87 (244)
T ss_dssp TTCEEEEECCTTSHHHHHHHHH----SSEEEEECSCHHHHHHHHHHTTTC-CSEEEECCCGGG
T ss_pred CCCEEEEEeCCchHHHHHHHHc----CCeEEEEECCHHHHHHHHHhhccC-CCeEEEEChHHh
Confidence 4789999999999999999984 468999999999999999887542 579999999985
No 253
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.09 E-value=4.6e-10 Score=105.57 Aligned_cols=108 Identities=15% Similarity=0.163 Sum_probs=80.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC-----------CCeEEEEEeCCHHHHHHHHhccccCCC---ceEEEEecCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN-----------DNVFVYGCDFSENAVNILKEHEEYKPD---RCHAFVCDVTSEDWN 173 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~-----------~~~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~~~ 173 (352)
+.+|||+|||+|.++..+++.+.. ...+++|+|+++.+++.|+.+....+. ++.+.++|.....
T Consensus 172 ~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~-- 249 (445)
T 2okc_A 172 GETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKE-- 249 (445)
T ss_dssp TCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSC--
T ss_pred CCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCc--
Confidence 679999999999999988875421 134799999999999999988654333 6788999987432
Q ss_pred CCCCCCcceEEEehhhhhccCh---------------hHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 174 PPFAPESLDIVLLIFVLDAINP---------------NKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 174 ~~~~~~~fD~V~~~~~l~~~~~---------------~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
. .++||+|+++-.+..... .....+++.+.++|+|||++.+..+
T Consensus 250 --~-~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 250 --P-STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp --C-SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred --c-cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEEEEC
Confidence 1 348999999754443211 1124789999999999999988753
No 254
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=99.05 E-value=1.6e-09 Score=98.56 Aligned_cols=163 Identities=16% Similarity=0.143 Sum_probs=103.4
Q ss_pred CCeEEEEcCCccccHHHHHhhc---------------CCCCeEEEEEeCC-----------HHHHHHHHhccccCCCceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHC---------------KNDNVFVYGCDFS-----------ENAVNILKEHEEYKPDRCH 161 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~---------------~~~~~~v~gvD~s-----------~~~l~~a~~~~~~~~~~v~ 161 (352)
..+|+|+||++|..+..++... ..|..+|+..|+. +.+.+.+++.... ..+.-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~-~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGR-KIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCC-CTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccC-CCCce
Confidence 4689999999999998877651 1256889999998 5555544332111 11235
Q ss_pred EEEecCCCCCCCCCCCCCcceEEEehhhhhccChh-------------------------------------HHHHHHHH
Q psy11741 162 AFVCDVTSEDWNPPFAPESLDIVLLIFVLDAINPN-------------------------------------KMQHVINQ 204 (352)
Q Consensus 162 ~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~-------------------------------------~~~~~l~~ 204 (352)
|+.+.....- ...++++++|+|+++.++|+++.. |+..+|+.
T Consensus 132 f~~gvpgSFy-~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~ 210 (384)
T 2efj_A 132 LIGAMPGSFY-SRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRI 210 (384)
T ss_dssp EEEECCSCTT-SCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecchhhh-hccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 6666544322 345779999999999999998411 22234777
Q ss_pred HHHhcCCCEEEEEEeCCCCch--h-----hHhhhc-----CccccCceeecCCCeeeeccCHHHHHHHHHhCC-CceEEe
Q psy11741 205 VYKYLKPGGMVLFRDYGRYDL--V-----QLRFKK-----GRCLQDNFYARGDGTLVYFFTREEVKTMFESAG-FVEKQN 271 (352)
Q Consensus 205 ~~~~LkpgG~l~~~~~~~~~~--~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~G-f~~~~~ 271 (352)
.++.|+|||.+++...+..+. . .+.... ...+....+ ..-..+.++.+.+++..+++++| |.+...
T Consensus 211 Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~-dsf~~P~y~ps~~E~~~~le~~g~F~i~~l 289 (384)
T 2efj_A 211 HSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKL-DSFNVPIYAPSTEEVKRIVEEEGSFEILYL 289 (384)
T ss_dssp HHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHH-HTCCCSBCCCCHHHHHHHHHHHCSEEEEEE
T ss_pred HHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhh-cccCCcccCCCHHHHHHHHHHcCCceEEEE
Confidence 799999999999998876554 2 111110 001111100 01122446789999999999984 788776
Q ss_pred ee
Q psy11741 272 LI 273 (352)
Q Consensus 272 ~~ 273 (352)
..
T Consensus 290 e~ 291 (384)
T 2efj_A 290 ET 291 (384)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 255
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.03 E-value=8.3e-10 Score=95.55 Aligned_cols=94 Identities=17% Similarity=0.171 Sum_probs=68.4
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+..+....+..+-. .++.+|||||||+|.++..+++ .+.+|+|+|+++.|++.++++... ..
T Consensus 10 nFL~d~~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~----~~~~V~avEid~~~~~~~~~~~~~-~~ 75 (255)
T 3tqs_A 10 HFLHDSFVLQKIVSAIHP---------QKTDTLVEIGPGRGALTDYLLT----ECDNLALVEIDRDLVAFLQKKYNQ-QK 75 (255)
T ss_dssp CEECCHHHHHHHHHHHCC---------CTTCEEEEECCTTTTTHHHHTT----TSSEEEEEECCHHHHHHHHHHHTT-CT
T ss_pred ccccCHHHHHHHHHhcCC---------CCcCEEEEEcccccHHHHHHHH----hCCEEEEEECCHHHHHHHHHHHhh-CC
Confidence 566666665555544422 2378999999999999999998 456999999999999999998764 46
Q ss_pred ceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 159 RCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 159 ~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+++++++|+.+..+.....+++|| |+++
T Consensus 76 ~v~~i~~D~~~~~~~~~~~~~~~~-vv~N 103 (255)
T 3tqs_A 76 NITIYQNDALQFDFSSVKTDKPLR-VVGN 103 (255)
T ss_dssp TEEEEESCTTTCCGGGSCCSSCEE-EEEE
T ss_pred CcEEEEcchHhCCHHHhccCCCeE-EEec
Confidence 799999999864221111135688 5543
No 256
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.03 E-value=2e-10 Score=103.16 Aligned_cols=111 Identities=15% Similarity=0.117 Sum_probs=78.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC------C---CceEEEEecCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK------P---DRCHAFVCDVTSEDWNPPFA 177 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~------~---~~v~~~~~d~~~~~~~~~~~ 177 (352)
++.+||+||||+|..+..+++.. ..+|++||+++.+++.|++++... . ++++++.+|+..........
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~---~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~ 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLK---PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTC---CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCEEEEEECChhHHHHHHHHCC---CCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc
Confidence 47899999999999999988863 368999999999999999987531 1 26999999987521100002
Q ss_pred CCcceEEEehhhh-h------cc-ChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 178 PESLDIVLLIFVL-D------AI-NPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 178 ~~~fD~V~~~~~l-~------~~-~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.++||+|++...- . ++ +.+-...+++.+.++|+|||++++...
T Consensus 265 ~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs~ 315 (364)
T 2qfm_A 265 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGN 315 (364)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEcC
Confidence 5789999985432 1 01 112233344445999999999998743
No 257
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.01 E-value=7.4e-10 Score=102.02 Aligned_cols=113 Identities=12% Similarity=0.063 Sum_probs=81.5
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCC--C----------------------------------CeEEEEEeCCHHHHHH
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKN--D----------------------------------NVFVYGCDFSENAVNI 148 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~--~----------------------------------~~~v~gvD~s~~~l~~ 148 (352)
..++..|||++||+|.+++.++..... | ..+|+|+|+|+.|++.
T Consensus 199 ~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~al~~ 278 (393)
T 3k0b_A 199 WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEI 278 (393)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceEEEEECCHHHHHH
Confidence 345788999999999999888765421 1 1469999999999999
Q ss_pred HHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEEehhhhh-cc-ChhHHHHHHHHHHHhcCC--CEEEEEEeCCC
Q psy11741 149 LKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLD-AI-NPNKMQHVINQVYKYLKP--GGMVLFRDYGR 222 (352)
Q Consensus 149 a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~-~~-~~~~~~~~l~~~~~~Lkp--gG~l~~~~~~~ 222 (352)
|++++...+ .++.+.++|+.+. +. ..+||+|+++--.. .+ ..++...+.+.+.+.||+ ||.+++.+...
T Consensus 279 Ar~Na~~~gl~~~I~~~~~D~~~~----~~-~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 353 (393)
T 3k0b_A 279 AKQNAVEAGLGDLITFRQLQVADF----QT-EDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVYVLTSYE 353 (393)
T ss_dssp HHHHHHHTTCTTCSEEEECCGGGC----CC-CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEEEEECCT
T ss_pred HHHHHHHcCCCCceEEEECChHhC----CC-CCCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 999987654 3589999999853 22 35899999973211 11 124566677777777765 88888766543
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.01 E-value=1.6e-09 Score=99.34 Aligned_cols=113 Identities=12% Similarity=0.073 Sum_probs=83.8
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCC------------------------------------CCeEEEEEeCCHHHHHH
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKN------------------------------------DNVFVYGCDFSENAVNI 148 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~------------------------------------~~~~v~gvD~s~~~l~~ 148 (352)
..++..|||.+||+|.+++.++....+ ...+++|+|+|+.|++.
T Consensus 192 ~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v~GvDid~~al~~ 271 (384)
T 3ldg_A 192 WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDISGFDFDGRMVEI 271 (384)
T ss_dssp CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceEEEEECCHHHHHH
Confidence 345789999999999999888765421 11469999999999999
Q ss_pred HHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEEehh--hhhccChhHHHHHHHHHHHhcCC--CEEEEEEeCCC
Q psy11741 149 LKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVLLIF--VLDAINPNKMQHVINQVYKYLKP--GGMVLFRDYGR 222 (352)
Q Consensus 149 a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~--~l~~~~~~~~~~~l~~~~~~Lkp--gG~l~~~~~~~ 222 (352)
|++++...+ ..+.+.++|+.+. +. ..+||+|+++- ....-+..+...+++.+.+.||+ ||.+++.+...
T Consensus 272 Ar~Na~~~gl~~~I~~~~~D~~~l----~~-~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 346 (384)
T 3ldg_A 272 ARKNAREVGLEDVVKLKQMRLQDF----KT-NKINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQFILTNDT 346 (384)
T ss_dssp HHHHHHHTTCTTTEEEEECCGGGC----CC-CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEEEEESCT
T ss_pred HHHHHHHcCCCCceEEEECChHHC----Cc-cCCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEEEEECCH
Confidence 999987654 3699999999853 22 35899999963 22211335677788888888876 88888876543
No 259
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.00 E-value=5.9e-10 Score=104.15 Aligned_cols=100 Identities=17% Similarity=0.250 Sum_probs=74.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|||+|||+|.++..+++... ++.+++|+|+++.+++.| .++.+.++|+.... ..++||+|+++
T Consensus 40 ~~~vLD~gcGtG~~~~~~~~~~~-~~~~i~gvDi~~~~~~~a--------~~~~~~~~D~~~~~-----~~~~fD~Ii~N 105 (421)
T 2ih2_A 40 GGRVLEPACAHGPFLRAFREAHG-TAYRFVGVEIDPKALDLP--------PWAEGILADFLLWE-----PGEAFDLILGN 105 (421)
T ss_dssp TCEEEEETCTTCHHHHHHHHHHC-SCSEEEEEESCTTTCCCC--------TTEEEEESCGGGCC-----CSSCEEEEEEC
T ss_pred CCEEEECCCCChHHHHHHHHHhC-CCCeEEEEECCHHHHHhC--------CCCcEEeCChhhcC-----ccCCCCEEEEC
Confidence 56999999999999999998653 356899999999988766 35889999987521 24689999994
Q ss_pred hhhh---c-------cChh-----------------HHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 188 FVLD---A-------INPN-----------------KMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 188 ~~l~---~-------~~~~-----------------~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
--.. . +..+ ....+++.+.++|+|||.+++..+.
T Consensus 106 PPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 106 PPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred cCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 2111 1 1111 1236789999999999999887643
No 260
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=98.99 E-value=2.7e-10 Score=104.32 Aligned_cols=101 Identities=13% Similarity=0.041 Sum_probs=78.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC---------------C-CceEEEEecCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK---------------P-DRCHAFVCDVTSED 171 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~---------------~-~~v~~~~~d~~~~~ 171 (352)
+.+|||+|||+|..++.++... ++.+|+++|+++.+++.+++|++.. + .++.+.++|+....
T Consensus 48 ~~~VLDl~aGtG~~~l~~a~~~--~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~ 125 (378)
T 2dul_A 48 PKIVLDALSATGIRGIRFALET--PAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLM 125 (378)
T ss_dssp CSEEEESSCTTSHHHHHHHHHS--SCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHH
T ss_pred CCEEEECCCchhHHHHHHHHhC--CCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHH
Confidence 7899999999999999999975 4567999999999999999998754 4 24889999986421
Q ss_pred CCCCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 172 WNPPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 172 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
....++||+|++.- . .....++..+.+.|+|||++++..
T Consensus 126 ---~~~~~~fD~I~lDP-~-----~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 126 ---AERHRYFHFIDLDP-F-----GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp ---HHSTTCEEEEEECC-S-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---HhccCCCCEEEeCC-C-----CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 11135799999531 1 223577888899999999888864
No 261
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=98.99 E-value=2.2e-09 Score=95.60 Aligned_cols=114 Identities=10% Similarity=0.097 Sum_probs=80.4
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
.++.+|||+|||+|..+..++..+. +..+|+++|+++.+++.++++++..+ .++.++.+|+.......+ ..++||.|
T Consensus 101 ~~g~~VLDlcaG~G~kt~~la~~~~-~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~-~~~~fD~V 178 (309)
T 2b9e_A 101 PPGSHVIDACAAPGNKTSHLAALLK-NQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDP-RYHEVHYI 178 (309)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCG-GGTTEEEE
T ss_pred CCCCEEEEeCCChhHHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCcccc-ccCCCCEE
Confidence 3488999999999999999998753 44689999999999999999987654 579999999875321110 01579999
Q ss_pred Eeh------hhhhcc---------Chh-------HHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 185 LLI------FVLDAI---------NPN-------KMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 185 ~~~------~~l~~~---------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
++. .++..- +++ .+..+|..+.++|+ ||+|+..+.+.
T Consensus 179 l~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~ 237 (309)
T 2b9e_A 179 LLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSL 237 (309)
T ss_dssp EECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCC
T ss_pred EEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCC
Confidence 972 122110 111 12356777877776 89988877653
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=98.99 E-value=1.3e-09 Score=100.18 Aligned_cols=113 Identities=12% Similarity=0.167 Sum_probs=83.4
Q ss_pred CCCCCeEEEEcCCccccHHHHHhhcCC------------------------------------CCeEEEEEeCCHHHHHH
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIVEHCKN------------------------------------DNVFVYGCDFSENAVNI 148 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~~~~~~------------------------------------~~~~v~gvD~s~~~l~~ 148 (352)
..++.+|||+|||+|.+++.++....+ ...+|+|+|+++.|++.
T Consensus 193 ~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~ 272 (385)
T 3ldu_A 193 WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKIYGYDIDEESIDI 272 (385)
T ss_dssp CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCEEEEESCHHHHHH
T ss_pred CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceEEEEECCHHHHHH
Confidence 345789999999999999988775421 12579999999999999
Q ss_pred HHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEEehhhhh-cc-ChhHHHHHHHHHHHhcCC--CEEEEEEeCCC
Q psy11741 149 LKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLD-AI-NPNKMQHVINQVYKYLKP--GGMVLFRDYGR 222 (352)
Q Consensus 149 a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~-~~-~~~~~~~~l~~~~~~Lkp--gG~l~~~~~~~ 222 (352)
|++++...+ .++++.++|+.+. +. +.+||+|+++--.. .+ +.++...+.+.+.+.|++ ||.+++.+...
T Consensus 273 Ar~Na~~~gl~~~i~~~~~D~~~l----~~-~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~iit~~~ 347 (385)
T 3ldu_A 273 ARENAEIAGVDEYIEFNVGDATQF----KS-EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYYLITSYE 347 (385)
T ss_dssp HHHHHHHHTCGGGEEEEECCGGGC----CC-SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEEEEESCT
T ss_pred HHHHHHHcCCCCceEEEECChhhc----Cc-CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEEEEECCH
Confidence 999987644 3699999999853 22 45899999954322 12 225667778888888876 88877766543
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=98.96 E-value=4e-10 Score=103.33 Aligned_cols=103 Identities=11% Similarity=0.098 Sum_probs=73.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCCC----------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPPF---------- 176 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~---------- 176 (352)
+.+|||+|||+|.++..+++ ...+|+|+|+|+.+++.|++++...+ .+++++.+|+.+....+.-
T Consensus 214 ~~~vLDl~cG~G~~~l~la~----~~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~ 289 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALAR----NFDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGI 289 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGG----GSSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGS
T ss_pred CCEEEEccCCCCHHHHHHHh----cCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhcccccccccc
Confidence 57899999999999999988 44589999999999999999987644 5799999998642100000
Q ss_pred --CCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 177 --APESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 177 --~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
.+.+||+|++.- +. ..+...+.+.|+++|.++....++
T Consensus 290 ~~~~~~fD~Vv~dP-------Pr-~g~~~~~~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 290 DLKSYQCETIFVDP-------PR-SGLDSETEKMVQAYPRILYISCNP 329 (369)
T ss_dssp CGGGCCEEEEEECC-------CT-TCCCHHHHHHHTTSSEEEEEESCH
T ss_pred ccccCCCCEEEECc-------Cc-cccHHHHHHHHhCCCEEEEEECCH
Confidence 013799998632 11 123445666777888887776553
No 264
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.94 E-value=2.4e-09 Score=93.34 Aligned_cols=105 Identities=12% Similarity=0.116 Sum_probs=75.0
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+..+....+..+-. .++ +|||||||+|.++..+++ .+.+|+|+|+++.|++.++++.. ..
T Consensus 28 nfL~d~~i~~~Iv~~~~~---------~~~-~VLEIG~G~G~lt~~L~~----~~~~V~avEid~~~~~~l~~~~~--~~ 91 (271)
T 3fut_A 28 NFLVSEAHLRRIVEAARP---------FTG-PVFEVGPGLGALTRALLE----AGAEVTAIEKDLRLRPVLEETLS--GL 91 (271)
T ss_dssp CEECCHHHHHHHHHHHCC---------CCS-CEEEECCTTSHHHHHHHH----TTCCEEEEESCGGGHHHHHHHTT--TS
T ss_pred cccCCHHHHHHHHHhcCC---------CCC-eEEEEeCchHHHHHHHHH----cCCEEEEEECCHHHHHHHHHhcC--CC
Confidence 566666666555544422 236 999999999999999999 45689999999999999999875 35
Q ss_pred ceEEEEecCCCCCCCCCCCC-CcceEEEehhhhhccChhHHHHHHHH
Q psy11741 159 RCHAFVCDVTSEDWNPPFAP-ESLDIVLLIFVLDAINPNKMQHVINQ 204 (352)
Q Consensus 159 ~v~~~~~d~~~~~~~~~~~~-~~fD~V~~~~~l~~~~~~~~~~~l~~ 204 (352)
+++++++|+.+. ++++ ..+|.|+++.- ++++.+-+..++..
T Consensus 92 ~v~vi~~D~l~~----~~~~~~~~~~iv~NlP-y~iss~il~~ll~~ 133 (271)
T 3fut_A 92 PVRLVFQDALLY----PWEEVPQGSLLVANLP-YHIATPLVTRLLKT 133 (271)
T ss_dssp SEEEEESCGGGS----CGGGSCTTEEEEEEEC-SSCCHHHHHHHHHH
T ss_pred CEEEEECChhhC----ChhhccCccEEEecCc-ccccHHHHHHHhcC
Confidence 799999999853 2222 26888887653 34444444444443
No 265
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.93 E-value=5.1e-09 Score=94.43 Aligned_cols=164 Identities=14% Similarity=0.122 Sum_probs=108.3
Q ss_pred CCeEEEEcCCccccHHHHHhhc--------------CCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHC--------------KNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSED 171 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~--------------~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~ 171 (352)
..+|+|+||++|..+..+.... ..|..+|+..|+.......+-+.+.... .+.-|..+.....-
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 4689999999999888766641 2367899999999988887766654210 12345555443321
Q ss_pred CCCCCCCCcceEEEehhhhhccCh-------------------------------hHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 172 WNPPFAPESLDIVLLIFVLDAINP-------------------------------NKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 172 ~~~~~~~~~fD~V~~~~~l~~~~~-------------------------------~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
...++++++|+|+++.++|+++. .|+..+|+..++.|+|||.+++...
T Consensus 132 -~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~~~ 210 (359)
T 1m6e_X 132 -GRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLTIL 210 (359)
T ss_dssp -SCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEEEE
T ss_pred -hccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEEe
Confidence 34577999999999999999842 2456679999999999999999877
Q ss_pred CCCchhh-----------Hhh-----hcCccccCceeecCCCeeeeccCHHHHHHHHHhCCC-ceEEeee
Q psy11741 221 GRYDLVQ-----------LRF-----KKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGF-VEKQNLI 273 (352)
Q Consensus 221 ~~~~~~~-----------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf-~~~~~~~ 273 (352)
+..+... +.. .....+....+. .-..+.++++.+++..++++.|. .+.....
T Consensus 211 gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d-~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e~ 279 (359)
T 1m6e_X 211 GRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMD-KFNIPQYTPSPTEVEAEILKEGSFLIDHIEA 279 (359)
T ss_dssp ECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTG-GGCCCCBCCCSHHHHHHHHHTTTBCCEEEEE
T ss_pred cCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhh-ccCCCccCCCHHHHHHHHHHcCCceEEEEEE
Confidence 6544211 110 001111111000 11234467899999999999965 7766544
No 266
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=98.90 E-value=1.2e-09 Score=100.11 Aligned_cols=101 Identities=16% Similarity=0.074 Sum_probs=79.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCC-eEEEEEeCCHHHHHHHHhccccCCC-c--eEEEEecCCCCCCCCC-CCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDN-VFVYGCDFSENAVNILKEHEEYKPD-R--CHAFVCDVTSEDWNPP-FAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~-~--v~~~~~d~~~~~~~~~-~~~~~fD 182 (352)
+.+|||++||+|.+++.++... .+ .+|+++|+++.+++.+++|++..+. + +.++.+|+.+.. . ...++||
T Consensus 53 g~~VLDlfaGtG~~sl~aa~~~--~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l---~~~~~~~fD 127 (392)
T 3axs_A 53 PVKVADPLSASGIRAIRFLLET--SCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFL---RKEWGFGFD 127 (392)
T ss_dssp CEEEEESSCTTSHHHHHHHHHC--SCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHH---HSCCSSCEE
T ss_pred CCEEEECCCcccHHHHHHHHhC--CCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHH---HHhhCCCCc
Confidence 6799999999999999999864 34 5899999999999999999887552 3 899999986421 1 1145799
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|++.- . .....++..+.+.|+|||+|+++.
T Consensus 128 ~V~lDP-~-----g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 128 YVDLDP-F-----GTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEECC-S-----SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEECC-C-----cCHHHHHHHHHHHhCCCCEEEEEe
Confidence 999753 1 122457888999999999888865
No 267
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.89 E-value=4.8e-09 Score=90.53 Aligned_cols=77 Identities=18% Similarity=0.194 Sum_probs=59.2
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+..+....+..+.. .++.+|||+|||+|.++..+++. +..+|+|+|+++.|++.++++ . ..
T Consensus 12 nfl~d~~i~~~iv~~~~~---------~~~~~VLDiG~G~G~lt~~L~~~---~~~~v~avEid~~~~~~~~~~-~--~~ 76 (249)
T 3ftd_A 12 HLLVSEGVLKKIAEELNI---------EEGNTVVEVGGGTGNLTKVLLQH---PLKKLYVIELDREMVENLKSI-G--DE 76 (249)
T ss_dssp SCEECHHHHHHHHHHTTC---------CTTCEEEEEESCHHHHHHHHTTS---CCSEEEEECCCHHHHHHHTTS-C--CT
T ss_pred cccCCHHHHHHHHHhcCC---------CCcCEEEEEcCchHHHHHHHHHc---CCCeEEEEECCHHHHHHHHhc-c--CC
Confidence 455566555554443322 23789999999999999999984 246999999999999999987 2 46
Q ss_pred ceEEEEecCCCC
Q psy11741 159 RCHAFVCDVTSE 170 (352)
Q Consensus 159 ~v~~~~~d~~~~ 170 (352)
+++++++|+.+.
T Consensus 77 ~v~~i~~D~~~~ 88 (249)
T 3ftd_A 77 RLEVINEDASKF 88 (249)
T ss_dssp TEEEECSCTTTC
T ss_pred CeEEEEcchhhC
Confidence 799999999853
No 268
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.87 E-value=1.6e-09 Score=96.02 Aligned_cols=80 Identities=25% Similarity=0.362 Sum_probs=63.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~fD~V~ 185 (352)
++.+|||+|||+|.++..+++.+ ++.+|+|+|+|+.|++.|++++...+.++.++++|+......+. ...++||.|+
T Consensus 26 ~g~~vLD~g~G~G~~s~~la~~~--~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl 103 (301)
T 1m6y_A 26 DEKIILDCTVGEGGHSRAILEHC--PGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGIL 103 (301)
T ss_dssp TTCEEEETTCTTSHHHHHHHHHC--TTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCEEEEEeCCcCHHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEE
Confidence 37899999999999999999976 56799999999999999999987655789999999874210000 0115799998
Q ss_pred ehh
Q psy11741 186 LIF 188 (352)
Q Consensus 186 ~~~ 188 (352)
+..
T Consensus 104 ~D~ 106 (301)
T 1m6y_A 104 MDL 106 (301)
T ss_dssp EEC
T ss_pred EcC
Confidence 743
No 269
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.78 E-value=9.8e-09 Score=89.96 Aligned_cols=80 Identities=14% Similarity=0.176 Sum_probs=60.5
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+..+....+..+-. .++.+|||||||+|.++..+++.....+.+|+|+|+|+.|++.++++. ..
T Consensus 23 ~fL~d~~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~ 90 (279)
T 3uzu_A 23 NFLVDHGVIDAIVAAIRP---------ERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GE 90 (279)
T ss_dssp CEECCHHHHHHHHHHHCC---------CTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GG
T ss_pred cccCCHHHHHHHHHhcCC---------CCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CC
Confidence 566666665555544322 237899999999999999999865211245999999999999999883 45
Q ss_pred ceEEEEecCCCC
Q psy11741 159 RCHAFVCDVTSE 170 (352)
Q Consensus 159 ~v~~~~~d~~~~ 170 (352)
+++++++|+.+.
T Consensus 91 ~v~~i~~D~~~~ 102 (279)
T 3uzu_A 91 LLELHAGDALTF 102 (279)
T ss_dssp GEEEEESCGGGC
T ss_pred CcEEEECChhcC
Confidence 799999999864
No 270
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.77 E-value=1e-08 Score=98.36 Aligned_cols=111 Identities=10% Similarity=0.026 Sum_probs=79.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCC----------------CeEEEEEeCCHHHHHHHHhccccCCC-c-----eEEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKND----------------NVFVYGCDFSENAVNILKEHEEYKPD-R-----CHAFV 164 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~----------------~~~v~gvD~s~~~l~~a~~~~~~~~~-~-----v~~~~ 164 (352)
++.+|||.|||+|.++..+++.+... ..+++|+|+++.+++.|+.+....+. . +.+.+
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 37799999999999998887764211 13799999999999999987654332 2 67888
Q ss_pred ecCCCCCCCCCCCCCcceEEEehhhhhccC------------hhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 165 CDVTSEDWNPPFAPESLDIVLLIFVLDAIN------------PNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 165 ~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~------------~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+|.... .+...++||+|+++--+.... ......++..+.++|+|||++.+..+
T Consensus 249 gDtL~~---~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 249 GNTLGS---DGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp SCTTSH---HHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCccc---ccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 887632 112346899999954322210 12234789999999999999888753
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=98.76 E-value=2.2e-09 Score=93.19 Aligned_cols=76 Identities=14% Similarity=0.194 Sum_probs=60.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCH-------HHHHHHHhccccCC--CceEEEEecCCCCCCCCC-CC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSE-------NAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP-FA 177 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~-------~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~-~~ 177 (352)
+.+|||+|||+|.++..++. .+.+|+|+|+|+ .+++.|+++....+ .+++++++|+.+. ++ ++
T Consensus 84 ~~~VLDlgcG~G~~a~~lA~----~g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~---l~~~~ 156 (258)
T 2r6z_A 84 HPTVWDATAGLGRDSFVLAS----LGLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ---MPALV 156 (258)
T ss_dssp CCCEEETTCTTCHHHHHHHH----TTCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH---HHHHH
T ss_pred cCeEEEeeCccCHHHHHHHH----hCCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH---HHhhh
Confidence 67999999999999999998 456899999999 99999988865432 3599999998742 11 22
Q ss_pred C--CcceEEEehhhh
Q psy11741 178 P--ESLDIVLLIFVL 190 (352)
Q Consensus 178 ~--~~fD~V~~~~~l 190 (352)
+ ++||+|++.-.+
T Consensus 157 ~~~~~fD~V~~dP~~ 171 (258)
T 2r6z_A 157 KTQGKPDIVYLDPMY 171 (258)
T ss_dssp HHHCCCSEEEECCCC
T ss_pred ccCCCccEEEECCCC
Confidence 3 689999995433
No 272
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.76 E-value=7.2e-09 Score=89.54 Aligned_cols=77 Identities=14% Similarity=0.126 Sum_probs=56.3
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+..+....+..+-. .++.+|||||||+|.++. +.. . ...+|+|+|+++.|++.++++.... .
T Consensus 2 nfL~d~~i~~~iv~~~~~---------~~~~~VLEIG~G~G~lt~-l~~-~--~~~~v~avEid~~~~~~a~~~~~~~-~ 67 (252)
T 1qyr_A 2 NFLNDQFVIDSIVSAINP---------QKGQAMVEIGPGLAALTE-PVG-E--RLDQLTVIELDRDLAARLQTHPFLG-P 67 (252)
T ss_dssp CEECCHHHHHHHHHHHCC---------CTTCCEEEECCTTTTTHH-HHH-T--TCSCEEEECCCHHHHHHHHTCTTTG-G
T ss_pred CCcCCHHHHHHHHHhcCC---------CCcCEEEEECCCCcHHHH-hhh-C--CCCeEEEEECCHHHHHHHHHHhccC-C
Confidence 455566555555544422 237799999999999999 643 2 2223999999999999999987542 4
Q ss_pred ceEEEEecCCC
Q psy11741 159 RCHAFVCDVTS 169 (352)
Q Consensus 159 ~v~~~~~d~~~ 169 (352)
+++++++|+.+
T Consensus 68 ~v~~i~~D~~~ 78 (252)
T 1qyr_A 68 KLTIYQQDAMT 78 (252)
T ss_dssp GEEEECSCGGG
T ss_pred ceEEEECchhh
Confidence 79999999985
No 273
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.75 E-value=1e-08 Score=87.79 Aligned_cols=109 Identities=14% Similarity=0.144 Sum_probs=70.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++.. +...++|+|++..+....... ...+.++.....++. ...+.+++||+|+|
T Consensus 74 ~~~~VLDLGaAPGGWSQvAa~~~--~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~d----v~~l~~~~~DlVls 146 (277)
T 3evf_A 74 LEGRVIDLGCGRGGWCYYAAAQK--EVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTD----IHRLEPVKCDTLLC 146 (277)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST--TEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCC----TTTSCCCCCSEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHhc--CCCcceeEEEeccCccccccc-CcCCCCeEEEeccce----ehhcCCCCccEEEe
Confidence 46799999999999999888753 344788888885431101000 011224555666653 23355788999999
Q ss_pred hhhhh----ccChhHHHHHHHHHHHhcCCC-EEEEEEeCCC
Q psy11741 187 IFVLD----AINPNKMQHVINQVYKYLKPG-GMVLFRDYGR 222 (352)
Q Consensus 187 ~~~l~----~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~~ 222 (352)
..+.+ .++......+|+.+.++|+|| |.|++..+.+
T Consensus 147 D~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 147 DIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred cCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 76544 221111123578889999999 9999987763
No 274
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.73 E-value=4.8e-08 Score=85.42 Aligned_cols=107 Identities=14% Similarity=0.170 Sum_probs=82.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc------CCCceEEEEecCCCCCCCCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY------KPDRCHAFVCDVTSEDWNPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~------~~~~v~~~~~d~~~~~~~~~~~~~~f 181 (352)
+++||=||.|.|..++.+++.. +..+|+.||+++.+++.|++.+.. ..++++++.+|.... +....++|
T Consensus 84 pk~VLIiGgGdG~~~revlk~~--~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~---l~~~~~~y 158 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK--NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNF---VNQTSQTF 158 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT--TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTT---TSCSSCCE
T ss_pred CCeEEEECCCchHHHHHHHHcC--CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHH---HhhccccC
Confidence 7899999999999999999864 556899999999999999987632 347899999999864 33446789
Q ss_pred eEEEehhhhhccChh--HHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 182 DIVLLIFVLDAINPN--KMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 182 D~V~~~~~l~~~~~~--~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
|+|++-..-..-... .-..+++.+++.|+|||+++...
T Consensus 159 DvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q~ 198 (294)
T 3o4f_A 159 DVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp EEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEEE
T ss_pred CEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEec
Confidence 999984321100001 12467899999999999999864
No 275
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.72 E-value=4.3e-08 Score=96.82 Aligned_cols=114 Identities=13% Similarity=0.092 Sum_probs=79.0
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcC----------------------------------------CCCeEEEEEeCCHHH
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCK----------------------------------------NDNVFVYGCDFSENA 145 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~----------------------------------------~~~~~v~gvD~s~~~ 145 (352)
.++..|||.+||+|.+++.++.... .+...++|+|+++.|
T Consensus 189 ~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~a 268 (703)
T 3v97_A 189 QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEYSSHFYGSDSDARV 268 (703)
T ss_dssp CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEESCHHH
T ss_pred CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccCCccEEEEECCHHH
Confidence 3577899999999999988776421 022579999999999
Q ss_pred HHHHHhccccCC--CceEEEEecCCCCCCCCCCCCCcceEEEehhhh--hccChhHHHHHHHH---HHHhcCCCEEEEEE
Q psy11741 146 VNILKEHEEYKP--DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVL--DAINPNKMQHVINQ---VYKYLKPGGMVLFR 218 (352)
Q Consensus 146 l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l--~~~~~~~~~~~l~~---~~~~LkpgG~l~~~ 218 (352)
++.|+.|+...+ ..+.+.++|+.+. ..+...++||+|+++=-. ..-+..+...+.+. +.+.+.|||.+++.
T Consensus 269 v~~A~~N~~~agv~~~i~~~~~D~~~~--~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~~~~il 346 (703)
T 3v97_A 269 IQRARTNARLAGIGELITFEVKDVAQL--TNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGWNLSLF 346 (703)
T ss_dssp HHHHHHHHHHTTCGGGEEEEECCGGGC--CCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHcCCCCceEEEECChhhC--ccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCCeEEEE
Confidence 999999987655 3489999999853 223334489999996221 11122344444444 44555689999887
Q ss_pred eCC
Q psy11741 219 DYG 221 (352)
Q Consensus 219 ~~~ 221 (352)
+..
T Consensus 347 t~~ 349 (703)
T 3v97_A 347 SAS 349 (703)
T ss_dssp ESC
T ss_pred eCC
Confidence 654
No 276
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.72 E-value=4.9e-08 Score=94.16 Aligned_cols=104 Identities=14% Similarity=0.231 Sum_probs=71.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC--CCeEEEEEeCCHHHHHHHHhcccc--CCCceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN--DNVFVYGCDFSENAVNILKEHEEY--KPDRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~--~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
...|||+|||+|.+....+++... ...+|++||.|+ |...|++.... .+.+|+++.+|+++. .+ ++++|+
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev--~L---PEKVDI 431 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREW--VA---PEKADI 431 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTC--CC---SSCEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceec--cC---CcccCE
Confidence 567999999999985444443311 334789999998 55566655443 347899999999863 23 368999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
|++=.+-..+-.+....+|....+.|||||+++=
T Consensus 432 IVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 432 IVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred EEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 9994332222223344678888899999999873
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.71 E-value=2e-07 Score=89.04 Aligned_cols=114 Identities=16% Similarity=0.218 Sum_probs=81.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCC-CCeEEEEEeCCHHHHHHHHhccccCC---CceEEEEecCCCCCCCCCCCCCcce
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKN-DNVFVYGCDFSENAVNILKEHEEYKP---DRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
++.+|||.+||+|.++..+++.+.. ....++|+|+++.++..|+.+....+ .++.+.++|.....|+ .....+||
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p-~~~~~~fD 299 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWP-TQEPTNFD 299 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSC-CSSCCCBS
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceeccccc-cccccccc
Confidence 4789999999999999998887531 35689999999999999998865433 3578899998754221 13467899
Q ss_pred EEEehhhh--hc-----------------cCh--hHHHHHHHHHHHhcC-CCEEEEEEeCC
Q psy11741 183 IVLLIFVL--DA-----------------INP--NKMQHVINQVYKYLK-PGGMVLFRDYG 221 (352)
Q Consensus 183 ~V~~~~~l--~~-----------------~~~--~~~~~~l~~~~~~Lk-pgG~l~~~~~~ 221 (352)
+|+++=-+ .. +++ ..-..++..+.+.|+ |||++.+..++
T Consensus 300 ~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~gGr~a~VlP~ 360 (542)
T 3lkd_A 300 GVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDNGVMAIVLPH 360 (542)
T ss_dssp EEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTTCEEEEEEET
T ss_pred EEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCceeEEEEecc
Confidence 99984111 00 100 011258899999999 99998887543
No 278
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.70 E-value=1.6e-08 Score=87.47 Aligned_cols=127 Identities=15% Similarity=0.186 Sum_probs=83.2
Q ss_pred CCeEEEEcCCccccHHHHHhhc------CCC-----CeEEEEEeCCH---HHHH-----------HHHhcccc-------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHC------KND-----NVFVYGCDFSE---NAVN-----------ILKEHEEY------- 155 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~------~~~-----~~~v~gvD~s~---~~l~-----------~a~~~~~~------- 155 (352)
+.+|||+|||+|..+..+++.. . | ..+++++|..+ .++. .|++....
T Consensus 61 ~~~ILEiGfGtG~n~l~~~~~~~~~~~~~-p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 61 LFVVAESGFGTGLNFLTLWQAFDQFREAH-PQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp EEEEEESCCTTSHHHHHHHHHHHHHHHHC-TTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCEEEEECCChHHHHHHHHHHHHhhhhhC-CCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 5699999999999888876643 2 3 36899999876 5554 33433221
Q ss_pred --------CCCceEEEEecCCCCCCCCCCCC----CcceEEEehhhhhccChh-HHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 156 --------KPDRCHAFVCDVTSEDWNPPFAP----ESLDIVLLIFVLDAINPN-KMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 156 --------~~~~v~~~~~d~~~~~~~~~~~~----~~fD~V~~~~~l~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
...++++..+|+.+. ++..+ ..||+|+....--.-.++ -...+++.++++|+|||+|+. ++.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~---l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t--ysa 214 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINEL---ISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT--FTS 214 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHH---GGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE--SCC
T ss_pred hhheeccCCceEEEEEECcHHHH---HhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE--EeC
Confidence 124677889998752 22112 379999984321111122 135789999999999999885 221
Q ss_pred CchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 223 YDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
...++..+.++||.+...
T Consensus 215 -------------------------------a~~vrr~L~~aGF~v~~~ 232 (257)
T 2qy6_A 215 -------------------------------AGFVRRGLQEAGFTMQKR 232 (257)
T ss_dssp -------------------------------BHHHHHHHHHHTEEEEEE
T ss_pred -------------------------------CHHHHHHHHHCCCEEEeC
Confidence 124677888899997654
No 279
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=98.69 E-value=6.1e-09 Score=95.63 Aligned_cols=72 Identities=7% Similarity=0.117 Sum_probs=59.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--C-CceEEEEecCCCCCCCCCC-CCCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--P-DRCHAFVCDVTSEDWNPPF-APESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~-~~v~~~~~d~~~~~~~~~~-~~~~fD~ 183 (352)
+.+|||+|||+|..+..+++ .+.+|+|+|+|+.|++.|++++... + .+++++++|+.+. ++. .+++||+
T Consensus 94 g~~VLDLgcG~G~~al~LA~----~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~---L~~~~~~~fDv 166 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMS----KASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEY---LPLIKTFHPDY 166 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHT----TCSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGS---HHHHHHHCCSE
T ss_pred CCEEEEeCCCchHHHHHHHh----cCCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHh---hhhccCCCceE
Confidence 78999999999999999988 5679999999999999999998753 3 5799999998752 121 2358999
Q ss_pred EEe
Q psy11741 184 VLL 186 (352)
Q Consensus 184 V~~ 186 (352)
|++
T Consensus 167 V~l 169 (410)
T 3ll7_A 167 IYV 169 (410)
T ss_dssp EEE
T ss_pred EEE
Confidence 998
No 280
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.68 E-value=5.6e-08 Score=93.11 Aligned_cols=109 Identities=12% Similarity=0.072 Sum_probs=75.0
Q ss_pred CeEEEEcCCccccHHHHHhhcCC-------------CCeEEEEEeCCHHHHHHHHhccccCCC--ceEEEEecCCCCCCC
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKN-------------DNVFVYGCDFSENAVNILKEHEEYKPD--RCHAFVCDVTSEDWN 173 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~-------------~~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~~ 173 (352)
.+|||.|||+|.++..+++.+.. ....++|+|+++.++..|+.+....+. ++.+.++|....
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~--- 322 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLD--- 322 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTS---
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcC---
Confidence 49999999999998887654310 146899999999999999988654332 233366776532
Q ss_pred CCCCCCcceEEEehhhhhc-------------------------cCh--hHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 174 PPFAPESLDIVLLIFVLDA-------------------------INP--NKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 174 ~~~~~~~fD~V~~~~~l~~-------------------------~~~--~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
..+...+||+|+++=-+.. +++ .....++..+.+.|+|||++.+..+
T Consensus 323 ~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~gGr~aiVlP 396 (544)
T 3khk_A 323 DQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAWMLHMLYHLAPTGSMALLLA 396 (544)
T ss_dssp CSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHHHHHHHHHhccCceEEEEec
Confidence 2234578999999422111 100 1112688999999999999888754
No 281
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.68 E-value=1.5e-07 Score=77.89 Aligned_cols=100 Identities=18% Similarity=0.120 Sum_probs=72.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC----CceEEEEecCCCCC-----------C
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP----DRCHAFVCDVTSED-----------W 172 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~----~~v~~~~~d~~~~~-----------~ 172 (352)
..+|||+||| .-+..+++. ++.+|+.+|.++...+.|+++++..+ .+++++.+|+.+.. .
T Consensus 31 a~~VLEiGtG--ySTl~lA~~---~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~ 105 (202)
T 3cvo_A 31 AEVILEYGSG--GSTVVAAEL---PGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWR 105 (202)
T ss_dssp CSEEEEESCS--HHHHHHHTS---TTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGG
T ss_pred CCEEEEECch--HHHHHHHHc---CCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhh
Confidence 6799999995 566666663 46799999999999999999887643 47999999975420 0
Q ss_pred CCC--------C-CCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 173 NPP--------F-APESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 173 ~~~--------~-~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.++ . ..++||+|+.-.- .....+..+.+.|+|||++++..
T Consensus 106 ~l~~~~~~i~~~~~~~~fDlIfIDg~-------k~~~~~~~~l~~l~~GG~Iv~DN 154 (202)
T 3cvo_A 106 SYPDYPLAVWRTEGFRHPDVVLVDGR-------FRVGCALATAFSITRPVTLLFDD 154 (202)
T ss_dssp GTTHHHHGGGGCTTCCCCSEEEECSS-------SHHHHHHHHHHHCSSCEEEEETT
T ss_pred hHHHHhhhhhccccCCCCCEEEEeCC-------CchhHHHHHHHhcCCCeEEEEeC
Confidence 011 1 1378999998542 12355566779999999998864
No 282
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.59 E-value=2.2e-08 Score=96.47 Aligned_cols=106 Identities=23% Similarity=0.175 Sum_probs=72.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcC--C---------CCeEEEEEeCCHHHHHHHHhccc-cCCCceEEEEecCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCK--N---------DNVFVYGCDFSENAVNILKEHEE-YKPDRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~--~---------~~~~v~gvD~s~~~l~~a~~~~~-~~~~~v~~~~~d~~~~~~~~~ 175 (352)
+..|||||||+|.++...+.+.. . ...+|++||.|+.++..++.+.. .....|+++.+|+++. .
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev----~ 485 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSL----P 485 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGH----H
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhc----c
Confidence 46899999999999654333221 0 23489999999977765554433 2446799999999853 2
Q ss_pred CC-----CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 176 FA-----PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 176 ~~-----~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
.+ .+++|+|++-..-.+...+-...+|..+.+.|||||+++=
T Consensus 486 lp~~~~~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 486 GIAKDRGFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHHHHTTCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred cccccCCCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 21 4789999995442222224455677778899999998773
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.51 E-value=1.3e-07 Score=85.43 Aligned_cols=115 Identities=13% Similarity=0.109 Sum_probs=83.5
Q ss_pred CCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-------CCceEEEEecCCCCCCCCCC
Q psy11741 104 DTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-------PDRCHAFVCDVTSEDWNPPF 176 (352)
Q Consensus 104 ~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-------~~~v~~~~~d~~~~~~~~~~ 176 (352)
.+.++.+|||+++|.|.-+..++... .+..|+++|+|+.-+...++++... +.++.+...|..... ..
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~--~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~---~~ 219 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTG--CCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWG---EL 219 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTT--CEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHH---HH
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhc--CCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcc---hh
Confidence 45568999999999999999998865 5568999999999888888776532 246788888876421 12
Q ss_pred CCCcceEEEeh----h---hhhc--------cCh-------hHHHHHHHHHHHhcCCCEEEEEEeCCCC
Q psy11741 177 APESLDIVLLI----F---VLDA--------INP-------NKMQHVINQVYKYLKPGGMVLFRDYGRY 223 (352)
Q Consensus 177 ~~~~fD~V~~~----~---~l~~--------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 223 (352)
..+.||.|++- . .... ..+ .-+..+|..+.++|||||+|+-++.+..
T Consensus 220 ~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 220 EGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp STTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred ccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 35789999972 1 1100 011 1245788999999999999998887643
No 284
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=98.49 E-value=3e-08 Score=85.62 Aligned_cols=93 Identities=9% Similarity=0.123 Sum_probs=60.6
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccc-------cCC---CceEEEEecCCCCCCCCCCCC
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEE-------YKP---DRCHAFVCDVTSEDWNPPFAP 178 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~-------~~~---~~v~~~~~d~~~~~~~~~~~~ 178 (352)
.+|||+|||+|..+..++.. +.+|+++|.++.+.+.++++.+ ..+ .+++++++|+.+. ++...
T Consensus 90 ~~VLDl~~G~G~dal~lA~~----g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~---L~~~~ 162 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLASV----GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTA---LTDIT 162 (258)
T ss_dssp CCEEETTCTTCHHHHHHHHH----TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHH---STTCS
T ss_pred CEEEEcCCcCCHHHHHHHHc----CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHH---HHhCc
Confidence 79999999999999999984 5589999999987555544432 111 4689999998752 22112
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCC
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKP 211 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkp 211 (352)
.+||+|++.-.+.+-. . ...+++..++|++
T Consensus 163 ~~fDvV~lDP~y~~~~-~--saavkk~~~~lr~ 192 (258)
T 2oyr_A 163 PRPQVVYLDPMFPHKQ-K--SALVKKEMRVFQS 192 (258)
T ss_dssp SCCSEEEECCCCCCCC-C-------HHHHHHHH
T ss_pred ccCCEEEEcCCCCCcc-c--chHHHHHHHHHHH
Confidence 4799999865554321 1 1344444455544
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=98.47 E-value=6.3e-08 Score=83.07 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=68.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|||||||+|.++..+++.. +...|+|+|++..+...+... ...+.++.....++. ...++.+++|+|+|
T Consensus 90 ~~~~VLDLGaAPGGWsQvAa~~~--gv~sV~GvdvG~d~~~~pi~~-~~~g~~ii~~~~~~d----v~~l~~~~~DvVLS 162 (282)
T 3gcz_A 90 PTGIVVDLGCGRGGWSYYAASLK--NVKKVMAFTLGVQGHEKPIMR-TTLGWNLIRFKDKTD----VFNMEVIPGDTLLC 162 (282)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST--TEEEEEEECCCCTTSCCCCCC-CBTTGGGEEEECSCC----GGGSCCCCCSEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhc--CCCeeeeEEeccCcccccccc-ccCCCceEEeeCCcc----hhhcCCCCcCEEEe
Confidence 47799999999999999888653 455789999987642222110 011223444443322 11234688999999
Q ss_pred hhhhh----ccChhHHHHHHHHHHHhcCCC--EEEEEEeCC
Q psy11741 187 IFVLD----AINPNKMQHVINQVYKYLKPG--GMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~----~~~~~~~~~~l~~~~~~Lkpg--G~l~~~~~~ 221 (352)
..... .++......+|.-+.++|+|| |.|++-.+.
T Consensus 163 DmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 163 DIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp CCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred cCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 66544 121112223577778999999 999998765
No 286
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.43 E-value=5.4e-07 Score=88.23 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=74.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCC-CCeEEEEEeCCHHHHHHH--Hhcccc----CC-CceEEEEecCCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKN-DNVFVYGCDFSENAVNIL--KEHEEY----KP-DRCHAFVCDVTSEDWNPPFAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~-~~~~v~gvD~s~~~l~~a--~~~~~~----~~-~~v~~~~~d~~~~~~~~~~~~ 178 (352)
++.+|||.|||+|.++..++..... ...+++|+|+++.+++.| +.+... .+ ....+...|+... .....
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~---~~~~~ 397 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSL---NPEDF 397 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGC---CGGGG
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcc---ccccc
Confidence 3779999999999999999886521 235799999999999999 544322 11 1224445555431 12235
Q ss_pred CcceEEEehhhhh--ccCh-------------------------hHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 179 ESLDIVLLIFVLD--AINP-------------------------NKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 179 ~~fD~V~~~~~l~--~~~~-------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++||+|+++=-.. .-.. +-...+++.+.++|+|||++.+..+.
T Consensus 398 ~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~ 467 (878)
T 3s1s_A 398 ANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNRPQTLFGQIGVEALFLELVTELVQDGTVISAIMPK 467 (878)
T ss_dssp TTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEET
T ss_pred CCCCEEEECCCccccccchhhhhhHHHHhhhhccccccccccccchHHHHHHHHHHhcCCCcEEEEEECh
Confidence 6899999942210 0000 11345788899999999999987654
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.40 E-value=3e-07 Score=70.73 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=61.7
Q ss_pred CCeEEEEcCCcc-ccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVG-NSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G-~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|||||||+| ..+..|++. .+..|+++|+++.+++ +++.|+.++.. . .-..||+|++
T Consensus 36 ~~rVlEVG~G~g~~vA~~La~~---~g~~V~atDInp~Av~--------------~v~dDiF~P~~--~-~Y~~~DLIYs 95 (153)
T 2k4m_A 36 GTRVVEVGAGRFLYVSDYIRKH---SKVDLVLTDIKPSHGG--------------IVRDDITSPRM--E-IYRGAALIYS 95 (153)
T ss_dssp SSEEEEETCTTCCHHHHHHHHH---SCCEEEEECSSCSSTT--------------EECCCSSSCCH--H-HHTTEEEEEE
T ss_pred CCcEEEEccCCChHHHHHHHHh---CCCeEEEEECCccccc--------------eEEccCCCCcc--c-ccCCcCEEEE
Confidence 579999999999 599999865 6779999999986443 78888875321 0 0147999977
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.. ++.++...+.++++.+ |.-+++...
T Consensus 96 ir-----PP~El~~~i~~lA~~v--~adliI~pL 122 (153)
T 2k4m_A 96 IR-----PPAEIHSSLMRVADAV--GARLIIKPL 122 (153)
T ss_dssp ES-----CCTTTHHHHHHHHHHH--TCEEEEECB
T ss_pred cC-----CCHHHHHHHHHHHHHc--CCCEEEEcC
Confidence 43 4566677777776644 455777644
No 288
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.37 E-value=4.6e-07 Score=79.02 Aligned_cols=107 Identities=12% Similarity=0.134 Sum_probs=79.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC---CCeEEEEEeCCHH--------------------------HHHHHHhccccCC-
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN---DNVFVYGCDFSEN--------------------------AVNILKEHEEYKP- 157 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~---~~~~v~gvD~s~~--------------------------~l~~a~~~~~~~~- 157 (352)
++.|||+||..|..+..++..+.. ++.+|+++|..+. .++.++++++..+
T Consensus 107 pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~gl 186 (282)
T 2wk1_A 107 PGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYDL 186 (282)
T ss_dssp CCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTTC
T ss_pred CCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcCC
Confidence 679999999999999888776521 3668999996421 4666777776543
Q ss_pred --CceEEEEecCCCCCCCCCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 158 --DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 158 --~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
.+++++.+|+.+.... .++++||+|+.-.-. . +.....|+.+...|+|||++++.++
T Consensus 187 ~~~~I~li~Gda~etL~~--~~~~~~d~vfIDaD~--y--~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 187 LDEQVRFLPGWFKDTLPT--APIDTLAVLRMDGDL--Y--ESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CSTTEEEEESCHHHHSTT--CCCCCEEEEEECCCS--H--HHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CcCceEEEEeCHHHHHhh--CCCCCEEEEEEcCCc--c--ccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 6799999998753211 335789999986532 1 3456789999999999999999765
No 289
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.26 E-value=6.8e-06 Score=73.79 Aligned_cols=95 Identities=14% Similarity=0.121 Sum_probs=63.0
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
.++.+|||+||++|.++..+++ .+..|+|||+.+ |-.... ..++|++.++|+... ..+.+.||+|+
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~----rg~~V~aVD~~~-l~~~l~-----~~~~V~~~~~d~~~~----~~~~~~~D~vv 275 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVK----RNMWVYSVDNGP-MAQSLM-----DTGQVTWLREDGFKF----RPTRSNISWMV 275 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH----TTCEEEEECSSC-CCHHHH-----TTTCEEEECSCTTTC----CCCSSCEEEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHH----CCCEEEEEEhhh-cChhhc-----cCCCeEEEeCccccc----cCCCCCcCEEE
Confidence 3589999999999999999998 677999999875 222222 136799999998742 23357899999
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
|-.+. ++.....++......+..++.++.
T Consensus 276 sDm~~---~p~~~~~l~~~wl~~~~~~~aI~~ 304 (375)
T 4auk_A 276 CDMVE---KPAKVAALMAQWLVNGWCRETIFN 304 (375)
T ss_dssp ECCSS---CHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred EcCCC---ChHHhHHHHHHHHhccccceEEEE
Confidence 96543 223333344443333334454443
No 290
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=98.25 E-value=1.2e-06 Score=75.71 Aligned_cols=108 Identities=12% Similarity=0.110 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+||||||++|.++..+++.. +...|+|+|++..+...... ....+.++.....++. ...+..+.+|+|+|
T Consensus 81 ~g~~vlDLGaaPGgWsqva~~~~--gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~d----i~~l~~~~~DlVls 153 (300)
T 3eld_A 81 ITGRVLDLGCGRGGWSYYAAAQK--EVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSN----VFTMPTEPSDTLLC 153 (300)
T ss_dssp CCEEEEEETCTTCHHHHHHHTST--TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCC----TTTSCCCCCSEEEE
T ss_pred CCCEEEEcCCCCCHHHHHHHHhc--CCceeeeEEecccccccccc-ccccCCceEEeecCce----eeecCCCCcCEEee
Confidence 48899999999999999999753 44578999997643111100 0001123333332221 11234678999999
Q ss_pred hhhhh----ccChhHHHHHHHHHHHhcCCC-EEEEEEeCC
Q psy11741 187 IFVLD----AINPNKMQHVINQVYKYLKPG-GMVLFRDYG 221 (352)
Q Consensus 187 ~~~l~----~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~~~ 221 (352)
..... .++......+|.-+.++|+|| |.|++-.+.
T Consensus 154 D~APnsG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 154 DIGESSSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp CCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred cCcCCCCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 65443 111111234577778999999 999998776
No 291
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.23 E-value=5.2e-07 Score=81.37 Aligned_cols=110 Identities=17% Similarity=0.158 Sum_probs=78.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc---------CCCceEEEEecCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY---------KPDRCHAFVCDVTSEDWNPPFA 177 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~---------~~~~v~~~~~d~~~~~~~~~~~ 177 (352)
++++||=||.|.|..++.+++. +..+|+.||+++.+++.|++.+.. ..++++++.+|.........-.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh---~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL---KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT---CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCeEEEECCCcHHHHHHHHhc---CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 3689999999999999999885 446899999999999999987532 1145788888876421000112
Q ss_pred CCcceEEEehhhhhcc-------C-hhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 178 PESLDIVLLIFVLDAI-------N-PNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~-------~-~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.++||+|+.-..-... . .--...+++.++++|+|||+++...
T Consensus 282 ~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 282 GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEec
Confidence 4679999985321110 0 1123567899999999999998853
No 292
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.17 E-value=3.9e-06 Score=74.05 Aligned_cols=77 Identities=13% Similarity=0.036 Sum_probs=57.8
Q ss_pred CCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC-C-CCcceE
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF-A-PESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~-~-~~~fD~ 183 (352)
.++..++|+.||.|..+..+++.+. +..+|+|+|.++.+++.|+ ++ ...++.+++++..+....++. . .+++|.
T Consensus 56 ~pggiyVD~TlG~GGHS~~iL~~lg-~~GrVig~D~Dp~Al~~A~-rL--~~~Rv~lv~~nF~~l~~~L~~~g~~~~vDg 131 (347)
T 3tka_A 56 RPDGIYIDGTFGRGGHSRLILSQLG-EEGRLLAIDRDPQAIAVAK-TI--DDPRFSIIHGPFSALGEYVAERDLIGKIDG 131 (347)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTTCC-TTCEEEEEESCHHHHHHHT-TC--CCTTEEEEESCGGGHHHHHHHTTCTTCEEE
T ss_pred CCCCEEEEeCcCCCHHHHHHHHhCC-CCCEEEEEECCHHHHHHHH-hh--cCCcEEEEeCCHHHHHHHHHhcCCCCcccE
Confidence 3488999999999999999999765 5679999999999999995 44 246789999887653111110 0 136888
Q ss_pred EEe
Q psy11741 184 VLL 186 (352)
Q Consensus 184 V~~ 186 (352)
|+.
T Consensus 132 ILf 134 (347)
T 3tka_A 132 ILL 134 (347)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 293
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.11 E-value=2.9e-06 Score=73.22 Aligned_cols=75 Identities=16% Similarity=0.060 Sum_probs=58.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~fD~V~ 185 (352)
++..+||++||.|..+..+++. +.+|+|+|.++.+++.|++ +.. .++.++++++.+....+. ...+++|.|+
T Consensus 22 ~gg~~VD~T~G~GGHS~~il~~----~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~~~g~~~vDgIL 94 (285)
T 1wg8_A 22 PGGVYVDATLGGAGHARGILER----GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKRHLAALGVERVDGIL 94 (285)
T ss_dssp TTCEEEETTCTTSHHHHHHHHT----TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHHHHHHTTCSCEEEEE
T ss_pred CCCEEEEeCCCCcHHHHHHHHC----CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHHHHHHcCCCCcCEEE
Confidence 4789999999999999999994 5699999999999999998 654 589999999875311111 1225799998
Q ss_pred ehh
Q psy11741 186 LIF 188 (352)
Q Consensus 186 ~~~ 188 (352)
+..
T Consensus 95 ~DL 97 (285)
T 1wg8_A 95 ADL 97 (285)
T ss_dssp EEC
T ss_pred eCC
Confidence 743
No 294
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=97.99 E-value=2.4e-05 Score=74.67 Aligned_cols=114 Identities=11% Similarity=0.123 Sum_probs=73.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCC-----------CeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKND-----------NVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~-----------~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~ 174 (352)
++.+|+|.+||+|.++....+.+... ...++|+|+++.+...|+-+.--.+ ....+..+|........
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 37799999999999988776654211 2469999999999999987654322 23355666655321111
Q ss_pred CCCCCcceEEEehhhhh---------cc-----ChhHHHHHHHHHHHhcC-------CCEEEEEEeC
Q psy11741 175 PFAPESLDIVLLIFVLD---------AI-----NPNKMQHVINQVYKYLK-------PGGMVLFRDY 220 (352)
Q Consensus 175 ~~~~~~fD~V~~~~~l~---------~~-----~~~~~~~~l~~~~~~Lk-------pgG~l~~~~~ 220 (352)
.....+||+|+++=-+. .+ ..+....++..+.+.|| |||++.+..+
T Consensus 297 ~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l~~gGr~avVlP 363 (530)
T 3ufb_A 297 MGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGSDNGGRAAVVVP 363 (530)
T ss_dssp CCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSSSSCCEEEEEEE
T ss_pred hcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhccCCCceEEEEec
Confidence 12245799999942221 01 11223356777888886 7999888654
No 295
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.91 E-value=1.1e-05 Score=68.04 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCccccHHHHHhh--cCCCCeEEEEEeCCHHHHHHHHhccccCCCce---EEEEe-cCCCCCCCCCCCCC
Q psy11741 106 CSTKNILEIGCGVGNSVFPIVEH--CKNDNVFVYGCDFSENAVNILKEHEEYKPDRC---HAFVC-DVTSEDWNPPFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~~~~~l~~~--~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v---~~~~~-d~~~~~~~~~~~~~ 179 (352)
.++.+|||+||+.|.++...++. ...-...++|+|+ + + .-.......+ .+.++ |+.+ ....
T Consensus 72 kpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~-----~P~~~~~~Gv~~i~~~~G~Df~~------~~~~ 138 (269)
T 2px2_A 72 QPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-E-----EPMLMQSYGWNIVTMKSGVDVFY------KPSE 138 (269)
T ss_dssp CCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-C-----CCCCCCSTTGGGEEEECSCCGGG------SCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-c-----CCCcccCCCceEEEeeccCCccC------CCCC
Confidence 34889999999999999999885 2100123455552 1 0 0010000223 44446 9874 2245
Q ss_pred cceEEEehhhhh----ccChhHHHHHHHHHHHhcCCCE-EEEEEeCC
Q psy11741 180 SLDIVLLIFVLD----AINPNKMQHVINQVYKYLKPGG-MVLFRDYG 221 (352)
Q Consensus 180 ~fD~V~~~~~l~----~~~~~~~~~~l~~~~~~LkpgG-~l~~~~~~ 221 (352)
.+|+|+|-..-. .++......+|.-+.++|+||| .|++-.+.
T Consensus 139 ~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFq 185 (269)
T 2px2_A 139 ISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILC 185 (269)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESC
T ss_pred CCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECC
Confidence 799999944221 1110111126777779999999 99987665
No 296
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.88 E-value=2e-05 Score=65.50 Aligned_cols=108 Identities=18% Similarity=0.177 Sum_probs=69.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEe-cCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVC-DVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~-d~~~~~~~~~~~~~~fD~V 184 (352)
++.+|||+||++|.++...+... ....|+|+|+...-.+.-+ .....+ ..++|..+ |+.. ++ ...+|.|
T Consensus 78 ~g~~VvDLGaapGGWSq~~a~~~--g~~~V~avdvG~~ghe~P~-~~~s~gwn~v~fk~gvDv~~----~~--~~~~Dtl 148 (267)
T 3p8z_A 78 PEGRVIDLGCGRGGWSYYCAGLK--KVTEVRGYTKGGPGHEEPV-PMSTYGWNIVKLMSGKDVFY----LP--PEKCDTL 148 (267)
T ss_dssp CCEEEEEESCTTSHHHHHHHTST--TEEEEEEECCCSTTSCCCC-CCCCTTTTSEEEECSCCGGG----CC--CCCCSEE
T ss_pred CCCEEEEcCCCCCcHHHHHHHhc--CCCEEEEEecCCCCccCcc-hhhhcCcCceEEEeccceee----cC--CccccEE
Confidence 47799999999999999888764 4457999999764221000 001111 56889988 8752 22 3679999
Q ss_pred EehhhhhccChh-H---HHHHHHHHHHhcCCCEEEEEEeCCCCc
Q psy11741 185 LLIFVLDAINPN-K---MQHVINQVYKYLKPGGMVLFRDYGRYD 224 (352)
Q Consensus 185 ~~~~~l~~~~~~-~---~~~~l~~~~~~LkpgG~l~~~~~~~~~ 224 (352)
+|.-.=..-++. + -.++|+-+.+.|++ |-+++-.+.+..
T Consensus 149 lcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 149 LCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp EECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred EEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 995432111111 2 23467777899998 788887766543
No 297
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=97.88 E-value=3.8e-05 Score=68.84 Aligned_cols=149 Identities=18% Similarity=0.238 Sum_probs=100.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC----------------------CCceEEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK----------------------PDRCHAFVC 165 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~----------------------~~~v~~~~~ 165 (352)
...|+.+|||.......+.... ++..++-+|. |..++.-++.+... ..+..++.+
T Consensus 98 ~~qVV~LGaGlDTr~~RL~~~~--~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~ 174 (334)
T 1rjd_A 98 KVQVVNLGCGSDLRMLPLLQMF--PHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAAC 174 (334)
T ss_dssp SEEEEEETCTTCCTHHHHHHHC--TTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEEC
T ss_pred CcEEEEeCCCCccHHHHhcCcC--CCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEec
Confidence 5789999999999998887754 5778899998 77777666654432 257889999
Q ss_pred cCCCCCC------CCCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC----chhhHhhhcCcc
Q psy11741 166 DVTSEDW------NPPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY----DLVQLRFKKGRC 235 (352)
Q Consensus 166 d~~~~~~------~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~~~~~~~~~~~ 235 (352)
|+.+..| ..+ ......++++-.++.+++++....+++.+.+.. |+|.+++.+...+ +.....+.
T Consensus 175 DL~d~~w~~~ll~~~~-d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~~m~---- 248 (334)
T 1rjd_A 175 DLNDITETTRLLDVCT-KREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGAIMQ---- 248 (334)
T ss_dssp CTTCHHHHHHHHHTTC-CTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHHHHH----
T ss_pred CCCCcHHHHHHHHhcC-CCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHHHHH----
Confidence 9987432 122 335678999999999999999999999999987 6777654443322 10000000
Q ss_pred ccCceee-cCC--CeeeeccCHHHHHHHHHhCCCc
Q psy11741 236 LQDNFYA-RGD--GTLVYFFTREEVKTMFESAGFV 267 (352)
Q Consensus 236 ~~~~~~~-~~~--~~~~~~~~~~~~~~ll~~~Gf~ 267 (352)
.++-. .+. .....+.++++..+.|.++||.
T Consensus 249 --~~l~~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 249 --SNLKESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp --HHHHHHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred --HHhhcccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 00000 000 1111356889999999999997
No 298
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.81 E-value=1.8e-05 Score=70.00 Aligned_cols=45 Identities=13% Similarity=0.141 Sum_probs=40.7
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY 155 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 155 (352)
++..|||++||+|.++..++. .+.+++|+|+++.+++.|++++..
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~----~g~~~~g~e~~~~~~~~a~~r~~~ 279 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAAR----WGRRALGVELVPRYAQLAKERFAR 279 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHH----cCCeEEEEeCCHHHHHHHHHHHHH
Confidence 478999999999999998887 667999999999999999998765
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.77 E-value=9.4e-05 Score=63.57 Aligned_cols=107 Identities=16% Similarity=0.188 Sum_probs=67.9
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEe-cCCCCCCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVC-DVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~-d~~~~~~~~~~~~~~fD~V 184 (352)
++.+||||||++|.++...+... ....|+|+|+...--+.-+ .....+ ..+.+... |+.. ++ ...+|+|
T Consensus 94 ~~~~VlDLGaapGGwsq~~~~~~--gv~~V~avdvG~~~he~P~-~~~ql~w~lV~~~~~~Dv~~----l~--~~~~D~i 164 (321)
T 3lkz_A 94 PVGKVIDLGCGRGGWCYYMATQK--RVQEVRGYTKGGPGHEEPQ-LVQSYGWNIVTMKSGVDVFY----RP--SECCDTL 164 (321)
T ss_dssp CCEEEEEETCTTCHHHHHHTTCT--TEEEEEEECCCSTTSCCCC-CCCBTTGGGEEEECSCCTTS----SC--CCCCSEE
T ss_pred CCCEEEEeCCCCCcHHHHHHhhc--CCCEEEEEEcCCCCccCcc-hhhhcCCcceEEEeccCHhh----CC--CCCCCEE
Confidence 47799999999999999877763 3447999999764110000 000111 23677776 7753 22 3669999
Q ss_pred EehhhhhccC-h----hHHHHHHHHHHHhcCCC-EEEEEEeCCCC
Q psy11741 185 LLIFVLDAIN-P----NKMQHVINQVYKYLKPG-GMVLFRDYGRY 223 (352)
Q Consensus 185 ~~~~~l~~~~-~----~~~~~~l~~~~~~Lkpg-G~l~~~~~~~~ 223 (352)
+|.-. ..-+ + ..-.++|+-+.+.|++| |-+++-.+.+.
T Consensus 165 vcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 165 LCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp EECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred EEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 98544 2221 1 11234677778999998 89998877763
No 300
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.47 E-value=0.001 Score=58.28 Aligned_cols=128 Identities=16% Similarity=0.171 Sum_probs=76.0
Q ss_pred CCeEEEEcCCccccHHHHHhhc--CCCC--eEEEEEeCCH------------HHHHHHHhcc---ccCCCceEEEEecCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHC--KNDN--VFVYGCDFSE------------NAVNILKEHE---EYKPDRCHAFVCDVT 168 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~--~~~~--~~v~gvD~s~------------~~l~~a~~~~---~~~~~~v~~~~~d~~ 168 (352)
.-+|||+|-|+|.......... ..+. .+++.+|..+ ...+...... ......+.+..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 4589999999998654332211 0133 4567776421 1111111111 111234567788886
Q ss_pred CCCCCCC-CCCCcceEEEehhhhhccChhHH-HHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCC
Q psy11741 169 SEDWNPP-FAPESLDIVLLIFVLDAINPNKM-QHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDG 246 (352)
Q Consensus 169 ~~~~~~~-~~~~~fD~V~~~~~l~~~~~~~~-~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (352)
+. ++ +.+.+||+|+.-..--.-+|+.+ ..+++.++++++|||+|.- ++
T Consensus 177 ~~---l~~l~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laT--Yt------------------------- 226 (308)
T 3vyw_A 177 KR---IKEVENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVS--YS------------------------- 226 (308)
T ss_dssp HH---GGGCCSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEE--SC-------------------------
T ss_pred HH---HhhhcccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEE--Ee-------------------------
Confidence 52 22 23457999998543222233322 4789999999999998764 22
Q ss_pred eeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 247 TLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 247 ~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
....++.-|+++||.+...
T Consensus 227 ------aag~VRR~L~~aGF~V~k~ 245 (308)
T 3vyw_A 227 ------SSLSVRKSLLTLGFKVGSS 245 (308)
T ss_dssp ------CCHHHHHHHHHTTCEEEEE
T ss_pred ------CcHHHHHHHHHCCCEEEec
Confidence 2345888999999998765
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.41 E-value=0.00038 Score=59.75 Aligned_cols=98 Identities=8% Similarity=0.159 Sum_probs=62.1
Q ss_pred CCCCCeEEEEcC------CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCC
Q psy11741 105 TCSTKNILEIGC------GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAP 178 (352)
Q Consensus 105 ~~~~~~vLD~Gc------G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 178 (352)
-..+.+|||+|+ .+|.. .+.+.. ..+..|+++|+.+-. . ... .++++|.... ...
T Consensus 107 vp~gmrVLDLGA~s~kg~APGS~--VLr~~~-p~g~~VVavDL~~~~---------s-da~-~~IqGD~~~~-----~~~ 167 (344)
T 3r24_A 107 VPYNMRVIHFGAGSDKGVAPGTA--VLRQWL-PTGTLLVDSDLNDFV---------S-DAD-STLIGDCATV-----HTA 167 (344)
T ss_dssp CCTTCEEEEESCCCTTSBCHHHH--HHHHHS-CTTCEEEEEESSCCB---------C-SSS-EEEESCGGGE-----EES
T ss_pred ecCCCEEEeCCCCCCCCCCCcHH--HHHHhC-CCCcEEEEeeCcccc---------c-CCC-eEEEcccccc-----ccC
Confidence 334899999995 66663 233332 134699999997731 1 122 4589997532 124
Q ss_pred CcceEEEehhh---hhccCh------hHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 179 ESLDIVLLIFV---LDAINP------NKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 179 ~~fD~V~~~~~---l~~~~~------~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
++||+|+|-.. ..+.+. .-...++.-+.++|+|||.|++-.+.
T Consensus 168 ~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 168 NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 78999999331 112211 13456677788899999999997553
No 302
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=97.40 E-value=5.1e-05 Score=84.66 Aligned_cols=150 Identities=13% Similarity=0.136 Sum_probs=70.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCC-C--CeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKN-D--NVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~-~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
+..+|||||.|+|..+..+.+.+.. + ..+++..|+|+...+.|+++++.. ++.....|..+ ..++...+||+
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~--di~~~~~d~~~---~~~~~~~~ydl 1314 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQL--HVTQGQWDPAN---PAPGSLGKADL 1314 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHH--TEEEECCCSSC---CCC-----CCE
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhc--ccccccccccc---cccCCCCceeE
Confidence 4679999999999988777665531 1 247889999998888887776431 22222223321 11223567999
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHh
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFES 263 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 263 (352)
|++.+++|.. .+....+.+++++|||||.+++.+..... ..+... .++...........+.++|..++..
T Consensus 1315 via~~vl~~t--~~~~~~l~~~~~lL~p~G~l~~~e~~~~~------~~g~~~--~~~~~~~r~~~~~~~~~~w~~~l~~ 1384 (2512)
T 2vz8_A 1315 LVCNCALATL--GDPAVAVGNMAATLKEGGFLLLHTLLAGH------PLGEMV--GFLTSPEQGGRHLLSQDQWESLFAG 1384 (2512)
T ss_dssp EEEECC----------------------CCEEEEEEC----------------------------------CTTTTSSTT
T ss_pred EEEccccccc--ccHHHHHHHHHHhcCCCcEEEEEeccccc------cccccc--cccccccccCCcccCHHHHHHHHHh
Confidence 9999999866 67788999999999999999987653210 000000 0000000011123566777788888
Q ss_pred CCCceEEe
Q psy11741 264 AGFVEKQN 271 (352)
Q Consensus 264 ~Gf~~~~~ 271 (352)
+||..+..
T Consensus 1385 ~gf~~~~~ 1392 (2512)
T 2vz8_A 1385 ASLHLVAL 1392 (2512)
T ss_dssp TTEEEEEE
T ss_pred CCCceeee
Confidence 99987654
No 303
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=97.30 E-value=0.0028 Score=56.03 Aligned_cols=109 Identities=11% Similarity=0.146 Sum_probs=81.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc----CCCceEEEEecCCCCCCC-----CCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY----KPDRCHAFVCDVTSEDWN-----PPFAP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~----~~~~v~~~~~d~~~~~~~-----~~~~~ 178 (352)
...|++||||-=.....+.. ..+..++-+| -|..++..++.+.. ...+..++.+|+.+ .+. ..+..
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~---~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~ 177 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDW---PTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDP 177 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCC---CTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCT
T ss_pred CCeEEEeCCCCCchhhhccC---CCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCC
Confidence 35799999998766555442 1357899999 58888888887753 24567889999986 321 11223
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
..--++++-.+++++++++...+++.+...+.||+.+++...+
T Consensus 178 ~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 178 SARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp TSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 3456777888999999999999999999999999999997554
No 304
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.17 E-value=0.0011 Score=59.55 Aligned_cols=84 Identities=8% Similarity=-0.041 Sum_probs=61.3
Q ss_pred ccccchhhHHHhhhhhhcccCCCCCCCCCCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC
Q psy11741 79 RFFKDRHWLFTEFTEIIEPLSSTKTDTCSTKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD 158 (352)
Q Consensus 79 ~f~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~ 158 (352)
+|..+.+...+.+..+-.... . ...++..|||||.|.|.+|..|++.. ...+|+++|+++.++...++.. . ..
T Consensus 33 nFL~d~~i~~~Iv~~~~l~~~-~--~~~~~~~VlEIGPG~G~LT~~Ll~~~--~~~~vvavE~D~~l~~~L~~~~-~-~~ 105 (353)
T 1i4w_A 33 KYLWNPTVYNKIFDKLDLTKT-Y--KHPEELKVLDLYPGVGIQSAIFYNKY--CPRQYSLLEKRSSLYKFLNAKF-E-GS 105 (353)
T ss_dssp CCBCCHHHHHHHHHHHCGGGT-C--CCTTTCEEEEESCTTCHHHHHHHHHH--CCSEEEEECCCHHHHHHHHHHT-T-TS
T ss_pred CccCCHHHHHHHHHhccCCcc-c--CcCCCCEEEEECCCCCHHHHHHHhhC--CCCEEEEEecCHHHHHHHHHhc-c-CC
Confidence 677777766666555432210 0 00125789999999999999999853 3458999999999999998876 2 36
Q ss_pred ceEEEEecCCC
Q psy11741 159 RCHAFVCDVTS 169 (352)
Q Consensus 159 ~v~~~~~d~~~ 169 (352)
+++++.+|+.+
T Consensus 106 ~l~ii~~D~l~ 116 (353)
T 1i4w_A 106 PLQILKRDPYD 116 (353)
T ss_dssp SCEEECSCTTC
T ss_pred CEEEEECCccc
Confidence 79999999864
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.06 E-value=0.00056 Score=59.08 Aligned_cols=45 Identities=18% Similarity=0.175 Sum_probs=40.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY 155 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~ 155 (352)
++..|||..||+|..+...++ .+.+++|+|+++.+++.|++++..
T Consensus 212 ~~~~vlD~f~GsGtt~~~a~~----~gr~~ig~e~~~~~~~~~~~r~~~ 256 (260)
T 1g60_A 212 PNDLVLDCFMGSGTTAIVAKK----LGRNFIGCDMNAEYVNQANFVLNQ 256 (260)
T ss_dssp TTCEEEESSCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHHHHHC
T ss_pred CCCEEEECCCCCCHHHHHHHH----cCCeEEEEeCCHHHHHHHHHHHHh
Confidence 478999999999999988877 667999999999999999998754
No 306
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=96.86 E-value=0.00041 Score=59.88 Aligned_cols=104 Identities=11% Similarity=0.069 Sum_probs=75.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+..+||+=+|||.+++.++. ++-+++.+|.++..++..++++.. ..++++...|.......+.-+..+||+|++-
T Consensus 92 ~~~~LDlfaGSGaLgiEaLS----~~d~~vfvE~~~~a~~~L~~Nl~~-~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiD 166 (283)
T 2oo3_A 92 LNSTLSYYPGSPYFAINQLR----SQDRLYLCELHPTEYNFLLKLPHF-NKKVYVNHTDGVSKLNALLPPPEKRGLIFID 166 (283)
T ss_dssp SSSSCCEEECHHHHHHHHSC----TTSEEEEECCSHHHHHHHTTSCCT-TSCEEEECSCHHHHHHHHCSCTTSCEEEEEC
T ss_pred CCCceeEeCCcHHHHHHHcC----CCCeEEEEeCCHHHHHHHHHHhCc-CCcEEEEeCcHHHHHHHhcCCCCCccEEEEC
Confidence 56789999999999999888 556899999999999999999875 4678999999653211111224579999984
Q ss_pred hhhhccChhHHHHHHHHHHH--hcCCCEEEEEE
Q psy11741 188 FVLDAINPNKMQHVINQVYK--YLKPGGMVLFR 218 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~--~LkpgG~l~~~ 218 (352)
=-... ..+...+++.+.+ .+.|+|++++-
T Consensus 167 PPYe~--k~~~~~vl~~L~~~~~r~~~Gi~v~W 197 (283)
T 2oo3_A 167 PSYER--KEEYKEIPYAIKNAYSKFSTGLYCVW 197 (283)
T ss_dssp CCCCS--TTHHHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCCCC--CcHHHHHHHHHHHhCccCCCeEEEEE
Confidence 32221 1466677766665 45789988884
No 307
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=96.67 E-value=0.0071 Score=51.68 Aligned_cols=107 Identities=18% Similarity=0.261 Sum_probs=71.5
Q ss_pred CCeEEEEcCCccccHHHHHhh---cC--CCCeEEEEEe-----CCH----------------------HHHHHH---Hhc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEH---CK--NDNVFVYGCD-----FSE----------------------NAVNIL---KEH 152 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~---~~--~~~~~v~gvD-----~s~----------------------~~l~~a---~~~ 152 (352)
++.|+|+||-.|..+..++.. +. .+..+++|+| +.+ ..++.. .++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 678999999999988876542 11 1456899998 321 112211 111
Q ss_pred ccc---CCCceEEEEecCCCCCCCCC-----CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 153 EEY---KPDRCHAFVCDVTSEDWNPP-----FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 153 ~~~---~~~~v~~~~~d~~~~~~~~~-----~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
... ...++.++.+++.+ .++ .+..+||+|+.-.-. . +.....++.+...|+|||++++.+++
T Consensus 150 ~~~~g~~~~~i~li~G~~~d---TL~~~l~~~~~~~~dlv~ID~D~--Y--~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRE---TVPRYLAENPQTVIALAYFDLDL--Y--EPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHH---HHHHHHHHCTTCCEEEEEECCCC--H--HHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred hhhcCCCCCcEEEEEecHHH---HHHHHHHhCCCCceEEEEEcCcc--c--chHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 111 23789999999875 222 234579999886532 1 45567888999999999999998875
No 308
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.51 E-value=0.04 Score=50.01 Aligned_cols=72 Identities=14% Similarity=0.066 Sum_probs=53.0
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC-C---CCCCCcceE
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN-P---PFAPESLDI 183 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~---~~~~~~fD~ 183 (352)
.++||+-||.|.++..+..+ |. .+.++|+++.+++..+.+.. +..++++|+.+.... + ......+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~a----G~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA----GFDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH----TCEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHC----CCcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 58999999999999988874 44 46799999999999888753 456788888753210 0 012457999
Q ss_pred EEehh
Q psy11741 184 VLLIF 188 (352)
Q Consensus 184 V~~~~ 188 (352)
|+...
T Consensus 75 i~ggp 79 (376)
T 3g7u_A 75 IIGGP 79 (376)
T ss_dssp EEECC
T ss_pred EEecC
Confidence 99744
No 309
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=96.37 E-value=0.0059 Score=60.20 Aligned_cols=110 Identities=15% Similarity=0.163 Sum_probs=68.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcC----------CCCeEEEEEeC---CHHHHHHHHhccc--------------------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCK----------NDNVFVYGCDF---SENAVNILKEHEE-------------------- 154 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~----------~~~~~v~gvD~---s~~~l~~a~~~~~-------------------- 154 (352)
.-+|||+|-|+|...+...+... ....++++++. +.+.+..+-....
T Consensus 67 ~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 146 (676)
T 3ps9_A 67 LFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGC 146 (676)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEE
T ss_pred ceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCc
Confidence 45899999999997777655431 12367999999 7777775443210
Q ss_pred ------cCCCceEEEEecCCCCCCCCCC-CCCcceEEEehhhhhccChhH-HHHHHHHHHHhcCCCEEEEE
Q psy11741 155 ------YKPDRCHAFVCDVTSEDWNPPF-APESLDIVLLIFVLDAINPNK-MQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 155 ------~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~ 217 (352)
.....+++..+|+.+....+.. ....||+|+.-..--..+++. -..+++.++++++|||.+..
T Consensus 147 ~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t 217 (676)
T 3ps9_A 147 HRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 217 (676)
T ss_dssp EEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEE
T ss_pred eEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEe
Confidence 0012345666776542111111 146799999854332223332 24678999999999998765
No 310
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.26 E-value=0.064 Score=47.67 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=50.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.++||+.||.|.++..+.. .|+ .+.++|+++.+++..+.+..... .+|+.+.... . -..+|+|+.
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~----aG~~~v~~~e~d~~a~~t~~~N~~~~~------~~Di~~~~~~-~--~~~~D~l~~ 77 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALES----CGAECVYSNEWDKYAQEVYEMNFGEKP------EGDITQVNEK-T--IPDHDILCA 77 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHH----TTCEEEEEECCCHHHHHHHHHHHSCCC------BSCGGGSCGG-G--SCCCSEEEE
T ss_pred CCcEEEECCCcCHHHHHHHH----CCCeEEEEEeCCHHHHHHHHHHcCCCC------cCCHHHcCHh-h--CCCCCEEEE
Confidence 57899999999999998887 444 47789999999999998864321 5787753211 1 135899998
Q ss_pred hh
Q psy11741 187 IF 188 (352)
Q Consensus 187 ~~ 188 (352)
..
T Consensus 78 gp 79 (327)
T 2c7p_A 78 GF 79 (327)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 311
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=96.24 E-value=0.053 Score=48.25 Aligned_cols=156 Identities=12% Similarity=0.106 Sum_probs=95.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc------------------------CCCceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY------------------------KPDRCHAF 163 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~------------------------~~~~v~~~ 163 (352)
...|+-+|||.=.....+..... ++..++=||.-+ .++.=++.+.. ...+..++
T Consensus 91 ~~QVV~LGaGlDTr~~RL~~~~~-~~~~~~EVD~P~-vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 91 HCQIVNLGAGMDTTFWRLKDEDL-LSSKYFEVDFPM-IVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp CSEEEEETCTTCCHHHHHHHTTC-CCSEEEEEECHH-HHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCEEEEeCCCcCchHHHhcCCCC-CCCeEEECCcHH-HHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 56899999999877777765211 356888888844 44332222211 13567888
Q ss_pred EecCCCCCCC------CCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCcccc
Q psy11741 164 VCDVTSEDWN------PPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQ 237 (352)
Q Consensus 164 ~~d~~~~~~~------~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 237 (352)
.+|+.+..+. ..+....--++++-.++.+++++....+|+.+.+...+|..++....++.+.....+.
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~M~------ 242 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQIMI------ 242 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCTTSHHHHHHH------
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEeccCCCCHHHHHHH------
Confidence 8998753110 1233445667888889999999999999999998876554444433433221110000
Q ss_pred CceeecCC--CeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 238 DNFYARGD--GTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 238 ~~~~~~~~--~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
.++-..+. .....+.++++..+.|.++||..+..
T Consensus 243 ~~l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~~ 278 (334)
T 3iei_A 243 ENLRRRQCDLAGVETCKSLESQKERLLSNGWETASA 278 (334)
T ss_dssp HHHHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEEE
T ss_pred HHHHHhCCCCcccccCCCHHHHHHHHHHcCCCccee
Confidence 00000111 12224578899999999999998654
No 312
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.11 E-value=0.017 Score=51.90 Aligned_cols=76 Identities=20% Similarity=0.225 Sum_probs=53.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|||+.||.|.++..+..... ....+.++|+++.+++..+.+... ..+..+|+.+... ..++...+|+|+..
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~-~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~~-~~~~~~~~D~l~~g 75 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCI-PAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGITL-EEFDRLSFDMILMS 75 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTC-SEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCCH-HHHHHHCCSEEEEC
T ss_pred CCeEEEeCcCccHHHHHHHHCCC-CceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHccH-hHcCcCCcCEEEEc
Confidence 45899999999999999887420 013589999999999999998742 3567888875320 00111258999985
Q ss_pred hh
Q psy11741 188 FV 189 (352)
Q Consensus 188 ~~ 189 (352)
.-
T Consensus 76 pP 77 (343)
T 1g55_A 76 PP 77 (343)
T ss_dssp CC
T ss_pred CC
Confidence 43
No 313
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=96.10 E-value=0.012 Score=58.13 Aligned_cols=131 Identities=15% Similarity=0.088 Sum_probs=80.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcC----------CCCeEEEEEeC---CHHHHHHHHhccc--------------------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCK----------NDNVFVYGCDF---SENAVNILKEHEE-------------------- 154 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~----------~~~~~v~gvD~---s~~~l~~a~~~~~-------------------- 154 (352)
.-+|+|+|.|+|...+.+.+... ....+++.++. +...+..|-....
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 56899999999998877766431 01268999998 5555554332210
Q ss_pred ------cCCCceEEEEecCCCCCCCCCC-CCCcceEEEehhhhhccChhH-HHHHHHHHHHhcCCCEEEEEEeCCCCchh
Q psy11741 155 ------YKPDRCHAFVCDVTSEDWNPPF-APESLDIVLLIFVLDAINPNK-MQHVINQVYKYLKPGGMVLFRDYGRYDLV 226 (352)
Q Consensus 155 ------~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~V~~~~~l~~~~~~~-~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 226 (352)
.....+++..+|+.+....+.. ....+|.++.-..--..+++. ...++..+.++++|||.+... +
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~--~----- 211 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF--T----- 211 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES--C-----
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec--c-----
Confidence 0113566777887642211111 146899999854322222222 256889999999999986642 1
Q ss_pred hHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 227 QLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
....++..+.++||.+...
T Consensus 212 --------------------------~~~~vr~~l~~aGf~~~~~ 230 (689)
T 3pvc_A 212 --------------------------AAGFVRRGLQQAGFNVTKV 230 (689)
T ss_dssp --------------------------CCHHHHHHHHHTTCEEEEE
T ss_pred --------------------------CcHHHHHHHHhCCeEEEec
Confidence 1245778888999987664
No 314
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.74 E-value=0.02 Score=43.98 Aligned_cols=99 Identities=15% Similarity=0.109 Sum_probs=61.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|+=+||| .++..+++.+...+..|+++|.++..++.+++. .+.++.+|..+...-....-..+|+|++.
T Consensus 7 ~~~viIiG~G--~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (140)
T 3fwz_A 7 CNHALLVGYG--RVGSLLGEKLLASDIPLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILT 78 (140)
T ss_dssp CSCEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEEC
T ss_pred CCCEEEECcC--HHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEE
Confidence 4578888885 466666665544788999999999988877652 35678888765321000112468888764
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
. +.+.....+-...+.+.|+..++...
T Consensus 79 ~-----~~~~~n~~~~~~a~~~~~~~~iiar~ 105 (140)
T 3fwz_A 79 I-----PNGYEAGEIVASARAKNPDIEIIARA 105 (140)
T ss_dssp C-----SCHHHHHHHHHHHHHHCSSSEEEEEE
T ss_pred C-----CChHHHHHHHHHHHHHCCCCeEEEEE
Confidence 2 21222223344556677887766643
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.58 E-value=0.0054 Score=54.62 Aligned_cols=47 Identities=6% Similarity=-0.075 Sum_probs=40.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP 157 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~ 157 (352)
++..|||.-||+|..+....+ .+.+.+|+|+++.+++.+++++....
T Consensus 252 ~~~~VlDpF~GsGtt~~aa~~----~gr~~ig~e~~~~~~~~~~~r~~~~~ 298 (323)
T 1boo_A 252 PDDLVVDIFGGSNTTGLVAER----ESRKWISFEMKPEYVAASAFRFLDNN 298 (323)
T ss_dssp TTCEEEETTCTTCHHHHHHHH----TTCEEEEEESCHHHHHHHHGGGSCSC
T ss_pred CCCEEEECCCCCCHHHHHHHH----cCCCEEEEeCCHHHHHHHHHHHHhcc
Confidence 488999999999998887776 66799999999999999999976543
No 316
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=94.88 E-value=0.05 Score=50.02 Aligned_cols=63 Identities=11% Similarity=0.148 Sum_probs=48.9
Q ss_pred CCCCCeEEEEcCCccccHHHHH-hhcCCCCeEEEEEeCCHHHHHHHHhcccc--C--C-CceEEEEecCC
Q psy11741 105 TCSTKNILEIGCGVGNSVFPIV-EHCKNDNVFVYGCDFSENAVNILKEHEEY--K--P-DRCHAFVCDVT 168 (352)
Q Consensus 105 ~~~~~~vLD~GcG~G~~~~~l~-~~~~~~~~~v~gvD~s~~~l~~a~~~~~~--~--~-~~v~~~~~d~~ 168 (352)
..++..|+||||+.|..+..++ +... +..+|+++|+++...+..+++... + . .++.++..-+.
T Consensus 224 l~~~~~viDvGAn~G~~s~~~a~~~~~-~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 224 FSDSEKMVDCGASIGESLAGLIGVTKG-KFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHHTS-CCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred cCCCCEEEECCCCcCHHHHHHHHHhcC-CCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 3568899999999999999888 3331 336999999999999999998765 1 2 57777766554
No 317
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=94.72 E-value=0.078 Score=48.49 Aligned_cols=101 Identities=12% Similarity=0.155 Sum_probs=63.4
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC---CC-C-CCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW---NP-P-FAPE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~---~~-~-~~~~ 179 (352)
++.+||-+|||. |..+..+++. .++ +|+++|.|+..++.+++. + ... .|..+... .+ . ....
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~l----G--a~~--i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGARL---LGAACVIVGDQNPERLKLLSDA----G--FET--IDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HTCSEEEEEESCHHHHHHHHTT----T--CEE--EETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEEcCCHHHHHHHHHc----C--CcE--EcCCCcchHHHHHHHHhCCC
Confidence 488999999987 7888888886 455 899999999999888753 1 122 23322110 00 0 0123
Q ss_pred cceEEEehhhhhccC------hhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDAIN------PNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~------~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+-...-.... .......+..+.++|++||.+++.
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~ 298 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIP 298 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECC
T ss_pred CCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEe
Confidence 699998644321100 001224678888999999998764
No 318
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.69 E-value=0.15 Score=45.29 Aligned_cols=74 Identities=14% Similarity=0.054 Sum_probs=50.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEE-EEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFV-YGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v-~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
..+++|+.||.|.++..+....- ..-.+ .++|+++.+.+..+.+.... ...+|+.+... ..++...+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~-~~~~v~~a~e~d~~a~~ty~~N~~~~-----~~~~DI~~~~~-~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSI-NINATFIPFDINEIANKIYSKNFKEE-----VQVKNLDSISI-KQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSC-CCCEEEEEECCCHHHHHHHHHHHCCC-----CBCCCTTTCCH-HHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHcCC-CceEEEEEEECCHHHHHHHHHHCCCC-----cccCChhhcCH-HHhccCCCCEEEe
Confidence 46899999999999988877320 01245 69999999999998886421 45678875321 0111236899987
Q ss_pred hh
Q psy11741 187 IF 188 (352)
Q Consensus 187 ~~ 188 (352)
..
T Consensus 83 gp 84 (327)
T 3qv2_A 83 SP 84 (327)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 319
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=94.59 E-value=0.26 Score=43.61 Aligned_cols=130 Identities=12% Similarity=0.100 Sum_probs=78.0
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCeE-EEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNVF-VYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
.+|||+-||.|.++..+-+ .|.+ +.++|+++.+.+.-+.+.. -.+..+|+.+... .. -..+|+++..
T Consensus 1 mkvidLFsG~GG~~~G~~~----aG~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~-~~--~~~~D~l~gg 68 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQK----AGFRIICANEYDKSIWKTYESNHS-----AKLIKGDISKISS-DE--FPKCDGIIGG 68 (331)
T ss_dssp CEEEEESCTTCHHHHHHHH----TTCEEEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCG-GG--SCCCSEEECC
T ss_pred CeEEEeCcCccHHHHHHHH----CCCEEEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCH-hh--CCcccEEEec
Confidence 3799999999999988877 4554 5699999999998888753 2567889886421 11 2368999874
Q ss_pred hhhhcc-------Chh----HHHHHHHHHHHhcCCCEEEEEEeCCCCchhhHhhhcCccccCceeecCCCeeeeccCHHH
Q psy11741 188 FVLDAI-------NPN----KMQHVINQVYKYLKPGGMVLFRDYGRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREE 256 (352)
Q Consensus 188 ~~l~~~-------~~~----~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (352)
.-...+ ..+ .+..-+-++.+.++|. ++++.. .+. . +. ... .-....
T Consensus 69 pPCQ~fS~ag~~~g~~d~R~~L~~~~~r~i~~~~Pk-~~~~EN-V~g-l----------~~-----~~~-----~~~~~~ 125 (331)
T 3ubt_Y 69 PPSQSWSEGGSLRGIDDPRGKLFYEYIRILKQKKPI-FFLAEN-VKG-M----------MA-----QRH-----NKAVQE 125 (331)
T ss_dssp CCGGGTEETTEECCTTCGGGHHHHHHHHHHHHHCCS-EEEEEE-CCG-G----------GG-----CTT-----SHHHHH
T ss_pred CCCCCcCCCCCccCCCCchhHHHHHHHHHHhccCCe-EEEeee-ecc-c----------cc-----ccc-----cchhhh
Confidence 322221 111 2222233455567886 344432 211 0 00 000 023566
Q ss_pred HHHHHHhCCCceEEeee
Q psy11741 257 VKTMFESAGFVEKQNLI 273 (352)
Q Consensus 257 ~~~ll~~~Gf~~~~~~~ 273 (352)
+...|++.||.+....+
T Consensus 126 i~~~l~~~GY~v~~~vl 142 (331)
T 3ubt_Y 126 FIQEFDNAGYDVHIILL 142 (331)
T ss_dssp HHHHHHHHTEEEEEEEE
T ss_pred hhhhhccCCcEEEEEec
Confidence 77888999998765543
No 320
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.52 E-value=0.086 Score=47.19 Aligned_cols=90 Identities=13% Similarity=0.049 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
.++.+||-+|+|. |..+..+++. .|++|+++|.++.-++.+++.- ... .+ .|.. .+ ...+|+|
T Consensus 175 ~~g~~VlV~GaG~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~lG----a~~-v~-~~~~----~~---~~~~D~v 238 (348)
T 3two_A 175 TKGTKVGVAGFGGLGSMAVKYAVA---MGAEVSVFARNEHKKQDALSMG----VKH-FY-TDPK----QC---KEELDFI 238 (348)
T ss_dssp CTTCEEEEESCSHHHHHHHHHHHH---TTCEEEEECSSSTTHHHHHHTT----CSE-EE-SSGG----GC---CSCEEEE
T ss_pred CCCCEEEEECCcHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHhcC----CCe-ec-CCHH----HH---hcCCCEE
Confidence 3488999999875 7777777776 5679999999999888887642 111 12 2221 11 1279999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+-...-. ..+..+.+.|+|||.+++.-
T Consensus 239 id~~g~~--------~~~~~~~~~l~~~G~iv~~G 265 (348)
T 3two_A 239 ISTIPTH--------YDLKDYLKLLTYNGDLALVG 265 (348)
T ss_dssp EECCCSC--------CCHHHHHTTEEEEEEEEECC
T ss_pred EECCCcH--------HHHHHHHHHHhcCCEEEEEC
Confidence 8643211 13566778999999988854
No 321
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=94.48 E-value=0.03 Score=50.01 Aligned_cols=96 Identities=15% Similarity=0.170 Sum_probs=62.0
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--CCCCCCcce
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--PPFAPESLD 182 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~~~~~~~fD 182 (352)
.++.+||-.|+|. |..+..+++. .|++|+++|.++..++.+++.-. .. . .|..+.... +....+.+|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~lGa----~~-~--i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYARA---MGLRVAAVDIDDAKLNLARRLGA----EV-A--VNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHTTC----SE-E--EETTTSCHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---CCCeEEEEeCCHHHHHHHHHcCC----CE-E--EeCCCcCHHHHHHHhCCCCC
Confidence 3488999999875 7777788876 56799999999999998876421 11 1 222211000 000013688
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+.... . ...++.+.+.|+|||.+++.-
T Consensus 235 ~vid~~g----~----~~~~~~~~~~l~~~G~iv~~G 263 (340)
T 3s2e_A 235 GVLVTAV----S----PKAFSQAIGMVRRGGTIALNG 263 (340)
T ss_dssp EEEESSC----C----HHHHHHHHHHEEEEEEEEECS
T ss_pred EEEEeCC----C----HHHHHHHHHHhccCCEEEEeC
Confidence 8875422 1 245677888999999988753
No 322
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.41 E-value=0.033 Score=50.48 Aligned_cols=97 Identities=13% Similarity=0.161 Sum_probs=62.5
Q ss_pred CCCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC-CCCCC
Q psy11741 105 TCSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP-PFAPE 179 (352)
Q Consensus 105 ~~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~-~~~~~ 179 (352)
..++.+||-+|||. |..+..+++. .++ +|+++|.++..++.+++.-. . ..+ |..+..+ .+ ....+
T Consensus 188 ~~~g~~VlV~GaG~vG~~a~qlak~---~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~vi--~~~~~~~~~~~~~~~~g 257 (371)
T 1f8f_A 188 VTPASSFVTWGAGAVGLSALLAAKV---CGASIIIAVDIVESRLELAKQLGA----T-HVI--NSKTQDPVAAIKEITDG 257 (371)
T ss_dssp CCTTCEEEEESCSHHHHHHHHHHHH---HTCSEEEEEESCHHHHHHHHHHTC----S-EEE--ETTTSCHHHHHHHHTTS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEECCCHHHHHHHHHcCC----C-EEe--cCCccCHHHHHHHhcCC
Confidence 34588999999986 7788888876 455 79999999999998876421 1 111 2211100 00 01123
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+-.... ...+..+.+.|+|||.+++.-
T Consensus 258 g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 289 (371)
T 1f8f_A 258 GVNFALESTGS--------PEILKQGVDALGILGKIAVVG 289 (371)
T ss_dssp CEEEEEECSCC--------HHHHHHHHHTEEEEEEEEECC
T ss_pred CCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEeC
Confidence 69999854321 245777889999999988753
No 323
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.08 E-value=0.042 Score=48.70 Aligned_cols=45 Identities=9% Similarity=0.016 Sum_probs=38.3
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCH---HHHHHHHhcccc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSE---NAVNILKEHEEY 155 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~---~~l~~a~~~~~~ 155 (352)
++..|||.-||+|..+..... .+.+.+|+|+++ ..++.+++++..
T Consensus 242 ~~~~vlDpF~GsGtt~~aa~~----~~r~~ig~e~~~~~~~~~~~~~~Rl~~ 289 (319)
T 1eg2_A 242 PGSTVLDFFAGSGVTARVAIQ----EGRNSICTDAAPVFKEYYQKQLTFLQD 289 (319)
T ss_dssp TTCEEEETTCTTCHHHHHHHH----HTCEEEEEESSTHHHHHHHHHHHHC--
T ss_pred CCCEEEecCCCCCHHHHHHHH----cCCcEEEEECCccHHHHHHHHHHHHHH
Confidence 488999999999999887777 566899999999 999999998754
No 324
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.05 E-value=0.042 Score=49.76 Aligned_cols=93 Identities=18% Similarity=0.199 Sum_probs=59.1
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+||-+|+|. |..+..+++. .|++|+++|.|+.-++.+++.-. . ..+ |..+..+.... .+.+|+|+
T Consensus 194 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~Vi~~~~~~~~~~~a~~lGa---~--~vi--~~~~~~~~~~~-~~g~Dvvi 262 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLAHA---MGAHVVAFTTSEAKREAAKALGA---D--EVV--NSRNADEMAAH-LKSFDFIL 262 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHTC---S--EEE--ETTCHHHHHTT-TTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHcCC---c--EEe--ccccHHHHHHh-hcCCCEEE
Confidence 488999999975 6777777776 56789999999998888876321 1 111 21110000001 14799998
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
....-. ..++.+.+.|+|+|.+++.
T Consensus 263 d~~g~~--------~~~~~~~~~l~~~G~iv~~ 287 (369)
T 1uuf_A 263 NTVAAP--------HNLDDFTTLLKRDGTMTLV 287 (369)
T ss_dssp ECCSSC--------CCHHHHHTTEEEEEEEEEC
T ss_pred ECCCCH--------HHHHHHHHHhccCCEEEEe
Confidence 643211 1355677899999998874
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=94.02 E-value=0.21 Score=45.52 Aligned_cols=101 Identities=12% Similarity=0.135 Sum_probs=63.6
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCC-C--CC-C-CCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSED-W--NP-P-FAPE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~--~~-~-~~~~ 179 (352)
++.+||-+|||. |..+..+++. .|+ +|+++|.++.-++.+++.- ... .|..+.. + .+ . ....
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlAk~---~Ga~~Vi~~~~~~~~~~~a~~lG------a~~--i~~~~~~~~~~~v~~~t~g~ 253 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASARL---LGAAVVIVGDLNPARLAHAKAQG------FEI--ADLSLDTPLHEQIAALLGEP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEEESCHHHHHHHHHTT------CEE--EETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHH---CCCCeEEEEcCCHHHHHHHHHcC------CcE--EccCCcchHHHHHHHHhCCC
Confidence 478999999876 7778888886 455 7999999999999887642 122 2322110 0 00 0 0123
Q ss_pred cceEEEehhhhhc-------cChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDA-------INPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~-------~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+-...-.. ....+....+..+.++|++||.+++.
T Consensus 254 g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 254 EVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp CEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 6999986443210 00012334678888999999998774
No 326
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=93.99 E-value=0.16 Score=45.17 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=51.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+++|+-||.|.+...+....- ..-.+.++|+++.+.+.-+.|... ..+...|+.+... ..++...+|+++..
T Consensus 3 ~~~~idLFaG~GG~~~G~~~aG~-~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~~-~~~~~~~~D~l~gg 76 (333)
T 4h0n_A 3 SHKILELYSGIGGMHCAWKESGL-DGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLTP-QVIKKWNVDTILMS 76 (333)
T ss_dssp CEEEEEETCTTTHHHHHHHHHTC-SEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCCH-HHHHHTTCCEEEEC
T ss_pred CCEEEEECcCccHHHHHHHHcCC-CceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCCH-HHhccCCCCEEEec
Confidence 34799999999999988877420 113578999999999998888642 3466788875321 01122368999874
Q ss_pred h
Q psy11741 188 F 188 (352)
Q Consensus 188 ~ 188 (352)
.
T Consensus 77 p 77 (333)
T 4h0n_A 77 P 77 (333)
T ss_dssp C
T ss_pred C
Confidence 3
No 327
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=93.86 E-value=0.22 Score=44.70 Aligned_cols=95 Identities=13% Similarity=0.125 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCC---CCC--CC-CCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS---EDW--NP-PFAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~---~~~--~~-~~~~ 178 (352)
++.+||-+|+|. |..+..+++. .|. +|+++|.++.-++.+++.-. . ..+ |... ..+ .+ ....
T Consensus 171 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~vi--~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVAKA---MGAAQVVVTDLSATRLSKAKEIGA----D-LVL--QISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEEESCHHHHHHHHHTTC----S-EEE--ECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHhCC----C-EEE--cCcccccchHHHHHHHHhC
Confidence 478999999875 7777778776 566 89999999998888875421 1 111 2110 000 00 0001
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+.+|+|+-... . ...+....++|+|||.+++.-
T Consensus 241 ~g~D~vid~~g-----~---~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 241 CKPEVTIECTG-----A---EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp SCCSEEEECSC-----C---HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCEEEECCC-----C---hHHHHHHHHHhcCCCEEEEEe
Confidence 46899885422 1 234677788999999988753
No 328
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=93.84 E-value=0.098 Score=45.77 Aligned_cols=96 Identities=17% Similarity=0.170 Sum_probs=53.9
Q ss_pred ceEEEEecCCCCCCCCCCCCCcceEEEehhhhh----cc----------C----hhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 159 RCHAFVCDVTSEDWNPPFAPESLDIVLLIFVLD----AI----------N----PNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 159 ~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~l~----~~----------~----~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
++.++++|+.+... .+++++||+|++.=-.. +. . ...+..+++++.++|+|||.+++...
T Consensus 21 ~~~i~~gD~~~~l~--~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 21 VHRLHVGDAREVLA--SFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp CEEEEESCHHHHHT--TSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCEEEECcHHHHHh--hCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46788888875211 13467899999832110 00 0 02345678899999999999988642
Q ss_pred CCCchhhHhhhcCccccCceeecCCCeeeeccCHHHHHHHHHhCCCceEEee
Q psy11741 221 GRYDLVQLRFKKGRCLQDNFYARGDGTLVYFFTREEVKTMFESAGFVEKQNL 272 (352)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~Gf~~~~~~ 272 (352)
.... . ....+.+..+.-...+..+++++||......
T Consensus 99 d~~~------------~----~~~~g~~~~~~~~~~l~~~~~~~Gf~~~~~i 134 (297)
T 2zig_A 99 DVAV------------A----RRRFGRHLVFPLHADIQVRCRKLGFDNLNPI 134 (297)
T ss_dssp CEEE------------E----CC----EEEECHHHHHHHHHHHTTCEEEEEE
T ss_pred CCcc------------c----cccCCcccccccHHHHHHHHHHcCCeeeccE
Confidence 2100 0 0000111111123567788899999776643
No 329
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=93.83 E-value=0.17 Score=38.58 Aligned_cols=98 Identities=16% Similarity=0.213 Sum_probs=59.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|+=+||| .++..+++.+...+.+|+++|.++..++.++.. .+.++.+|..+...-....-..+|+|+..
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~~ 77 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGKKVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLIT 77 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEEC
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEEe
Confidence 4578889884 577777776654788999999999988777643 25678888875321001112468888764
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.. .......+....+.+. .+.++...
T Consensus 78 ~~-----~~~~n~~~~~~a~~~~-~~~iia~~ 103 (141)
T 3llv_A 78 GS-----DDEFNLKILKALRSVS-DVYAIVRV 103 (141)
T ss_dssp CS-----CHHHHHHHHHHHHHHC-CCCEEEEE
T ss_pred cC-----CHHHHHHHHHHHHHhC-CceEEEEE
Confidence 32 1222333344444455 55555543
No 330
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=93.80 E-value=0.43 Score=40.59 Aligned_cols=112 Identities=13% Similarity=0.149 Sum_probs=67.1
Q ss_pred CCeEEEEcCCcc-ccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC-CceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 108 TKNILEIGCGVG-NSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP-DRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G-~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
++++|=.|++.| .++..+++.+...|++|+.++.++...+.+.+.....+ .++.++.+|+.+...-.. + .-+
T Consensus 7 ~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (266)
T 3oig_A 7 GRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQVG 86 (266)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHHS
T ss_pred CCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHhC
Confidence 678888887632 34555555543378899999988765555544433322 368999999986321000 0 013
Q ss_pred cceEEEehhhhhc----------cChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDA----------INPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~----------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+++.+..+.. .+.+++. .+++.+...++++|.++...
T Consensus 87 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 147 (266)
T 3oig_A 87 VIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLT 147 (266)
T ss_dssp CCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEe
Confidence 6888887554321 2333333 34566677778888877653
No 331
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=93.54 E-value=0.21 Score=45.09 Aligned_cols=95 Identities=17% Similarity=0.213 Sum_probs=61.7
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-----C-CCCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-----N-PPFAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-----~-~~~~~ 178 (352)
++.+||=+|+|. |..+..+++. .|+ +|+++|.++.-++.+++.-.. .. .|.....+ . .....
T Consensus 182 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~lGa~-----~v--i~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLARL---AGATTVILSTRQATKRRLAEEVGAT-----AT--VDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEECSCHHHHHHHHHHTCS-----EE--ECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHcCCC-----EE--ECCCCcCHHHHHHhhhhccC
Confidence 478999999865 6677777776 566 899999999999888764211 11 12211100 0 00123
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+.+|+|+-.... ...+..+.++|++||.+++.-
T Consensus 252 gg~Dvvid~~G~--------~~~~~~~~~~l~~~G~vv~~G 284 (370)
T 4ej6_A 252 GGVDVVIECAGV--------AETVKQSTRLAKAGGTVVILG 284 (370)
T ss_dssp TCEEEEEECSCC--------HHHHHHHHHHEEEEEEEEECS
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHhccCCEEEEEe
Confidence 479999864211 245777888999999988753
No 332
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=93.43 E-value=0.081 Score=43.04 Aligned_cols=93 Identities=22% Similarity=0.235 Sum_probs=57.8
Q ss_pred CCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC-C-CCCCc
Q psy11741 107 STKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP-P-FAPES 180 (352)
Q Consensus 107 ~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~-~-~~~~~ 180 (352)
++.+||..|+ |.|..+..++.. .|.+|+++|.++..++.+++. +... ..|..+... .. . ...+.
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~---~G~~V~~~~~~~~~~~~~~~~----g~~~---~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKM---IGARIYTTAGSDAKREMLSRL----GVEY---VGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHTT----CCSE---EEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHc----CCCE---EeeCCcHHHHHHHHHHhCCCC
Confidence 3789999995 445555555554 567999999999888777543 1111 124332110 00 0 11246
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+|+.+.. . ..+..+.+.|+|||.+++.
T Consensus 108 ~D~vi~~~g-----~----~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 108 VDVVLNSLA-----G----EAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp EEEEEECCC-----T----HHHHHHHHTEEEEEEEEEC
T ss_pred CeEEEECCc-----h----HHHHHHHHHhccCCEEEEE
Confidence 999986432 1 3567788999999998874
No 333
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=93.34 E-value=0.68 Score=43.27 Aligned_cols=58 Identities=16% Similarity=0.211 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeE-EEEEeCCHHHHHHHHhccccCCCceEEEEecCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVF-VYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS 169 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 169 (352)
...+++|+-||.|.++..+.. .|.+ |.++|+++.+.+.-+.+.... +....+.+|+.+
T Consensus 87 ~~~~viDLFaG~GGlslG~~~----aG~~~v~avE~d~~A~~ty~~N~~~~-p~~~~~~~DI~~ 145 (482)
T 3me5_A 87 YAFRFIDLFAGIGGIRRGFES----IGGQCVFTSEWNKHAVRTYKANHYCD-PATHHFNEDIRD 145 (482)
T ss_dssp CSEEEEEESCTTSHHHHHHHT----TTEEEEEEECCCHHHHHHHHHHSCCC-TTTCEEESCTHH
T ss_pred ccceEEEecCCccHHHHHHHH----CCCEEEEEEeCCHHHHHHHHHhcccC-CCcceeccchhh
Confidence 356899999999999988877 5554 789999999998888876322 234566788764
No 334
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=93.34 E-value=0.15 Score=45.71 Aligned_cols=95 Identities=14% Similarity=0.108 Sum_probs=60.3
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCC-CCC--CCC--CC---
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS-EDW--NPP--FA--- 177 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~--~~~--~~--- 177 (352)
++.+||-+|+|. |..+..+++. .+++|+++|.++..++.+++.- .. .. .|..+ ... .+. ..
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~lG----a~-~~--~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAAKA---YGAFVVCTARSPRRLEVAKNCG----AD-VT--LVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHTT----CS-EE--EECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCEEEEEcCCHHHHHHHHHhC----CC-EE--EcCcccccHHHHHHHHhcccc
Confidence 478999999875 6677777776 5667999999999988887542 11 11 12221 100 000 00
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+.+|+|+..... ...++...++|+|+|.+++.-
T Consensus 238 g~g~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSGN--------EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSCC--------HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 2468998854321 234677788999999988753
No 335
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=93.21 E-value=0.31 Score=43.19 Aligned_cols=94 Identities=17% Similarity=0.132 Sum_probs=59.3
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCC-CCCC--C-CCCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS-EDWN--P-PFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~-~~~~--~-~~~~~ 179 (352)
.++.+||-.|| |.|..+..+++. .|++|+++|.++..++.+++. +.. ...|..+ .... + ....+
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~---~G~~V~~~~~~~~~~~~~~~~----g~~---~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKL---KGCKVVGAAGSDEKIAYLKQI----GFD---AAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHT----TCS---EEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhc----CCc---EEEecCCHHHHHHHHHHHhCC
Confidence 35789999998 455555555554 677999999999888887443 111 1234432 1100 0 00124
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+.+... ..+..+.+.|++||.+++.
T Consensus 214 ~~d~vi~~~g~---------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 214 GYDCYFDNVGG---------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp CEEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred CCeEEEECCCh---------HHHHHHHHHHhcCCEEEEE
Confidence 69998865431 2367788999999998874
No 336
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=93.05 E-value=0.092 Score=45.86 Aligned_cols=72 Identities=13% Similarity=0.147 Sum_probs=51.8
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeE---EEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC-CCcce
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVF---VYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA-PESLD 182 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~---v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~fD 182 (352)
...+++|+-||.|.++..+.. .|.+ +.++|+++.+++..+.+.. ...+..+|+.+.... .++ .+.+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~----aG~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~-~i~~~~~~D 85 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKD----LGIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQK-HIQEWGPFD 85 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHH----TTBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHH-HHHHTCCCS
T ss_pred CCCEEEEeCcCccHHHHHHHH----CCCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHH-HhcccCCcC
Confidence 367899999999999988877 4444 5899999999888777753 345778898753210 011 13689
Q ss_pred EEEeh
Q psy11741 183 IVLLI 187 (352)
Q Consensus 183 ~V~~~ 187 (352)
+++..
T Consensus 86 ll~gg 90 (295)
T 2qrv_A 86 LVIGG 90 (295)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 99984
No 337
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.80 E-value=0.49 Score=46.57 Aligned_cols=155 Identities=14% Similarity=0.220 Sum_probs=91.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcC------CCCeEEEEEeCCHHHHHHHHhccccC-------------------------
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCK------NDNVFVYGCDFSENAVNILKEHEEYK------------------------- 156 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~------~~~~~v~gvD~s~~~l~~a~~~~~~~------------------------- 156 (352)
...|+-||||.=.....|..... ..+..++=+|..+.+....+ .+...
T Consensus 108 ~~qvV~LGaGlDtr~~Rl~~~~~~~~~~~~~~~~~~EvD~p~v~~~K~~-~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 186 (695)
T 2zwa_A 108 KIVVVNLGCGYDPLPFQLLDTNNIQSQQYHDRVSFIDIDYSDLLKIKIE-LIKTIPELSKIIGLSEDKDYVDDSNVDFLT 186 (695)
T ss_dssp EEEEEEETCTTCCHHHHHHCTTCGGGGGGSSSEEEEEEECHHHHHHHHH-HHHHCHHHHHHTTCCSSCSSCSCTTCCCEE
T ss_pred CcEEEEcccccCcceeeeeccCcccccccCCCCEEEECccHHHHHHHHH-HHHcChHHHHhhcccccccccccccccccc
Confidence 56899999999887777765321 13667888888554333322 22100
Q ss_pred CCceEEEEecCCCCCC------CCCC-CCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC----ch
Q psy11741 157 PDRCHAFVCDVTSEDW------NPPF-APESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY----DL 225 (352)
Q Consensus 157 ~~~v~~~~~d~~~~~~------~~~~-~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~----~~ 225 (352)
..+..++.+|+.+..+ ...+ ....--++++-.++.+++++...++|+.+.+. |+|.+++.+...+ +.
T Consensus 187 s~~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~~--~~~~~~~~e~~~~~~~~d~ 264 (695)
T 2zwa_A 187 TPKYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSKM--ENSHFIILEQLIPKGPFEP 264 (695)
T ss_dssp CSSEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHTS--SSEEEEEEEECCTTCTTSH
T ss_pred CCCeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhhC--CCceEEEEEeecCCCCCCh
Confidence 0367888899875311 0112 33445567777889999999999999999864 6776666443222 11
Q ss_pred hhHhhhcCccccCceeecC--CCeeeeccCHHHHHHHHHhCCCceEEe
Q psy11741 226 VQLRFKKGRCLQDNFYARG--DGTLVYFFTREEVKTMFESAGFVEKQN 271 (352)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ll~~~Gf~~~~~ 271 (352)
....+. .++-..+ -.....+.+.++..+.|.+.||..+..
T Consensus 265 f~~~m~------~~~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v~~ 306 (695)
T 2zwa_A 265 FSKQML------AHFKRNDSPLQSVLKYNTIESQVQRFNKLGFAYVNV 306 (695)
T ss_dssp HHHHHH------HHHHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHH------HHHHHcCCCCCccccCCCHHHHHHHHHHCCCCCcce
Confidence 100000 0000000 111123567999999999999986543
No 338
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=92.76 E-value=0.076 Score=47.63 Aligned_cols=96 Identities=17% Similarity=0.130 Sum_probs=61.0
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC-C-CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP-P-FAPE 179 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~-~-~~~~ 179 (352)
.++.+||-+|+|. |..+..+++. .|+ +|+++|.++.-++.+++.-.. .. .|..+... .+ . ....
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla~~---~Ga~~Vi~~~~~~~~~~~~~~lGa~-----~v--i~~~~~~~~~~v~~~t~g~ 234 (352)
T 3fpc_A 165 KLGDTVCVIGIGPVGLMSVAGANH---LGAGRIFAVGSRKHCCDIALEYGAT-----DI--INYKNGDIVEQILKATDGK 234 (352)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHT---TTCSSEEEECCCHHHHHHHHHHTCC-----EE--ECGGGSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCcEEEEECCCHHHHHHHHHhCCc-----eE--EcCCCcCHHHHHHHHcCCC
Confidence 3478999999875 6677777775 566 799999999988888775211 11 12211100 00 0 1134
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+-...- ...+..+.+.|+|||.+++.-
T Consensus 235 g~D~v~d~~g~--------~~~~~~~~~~l~~~G~~v~~G 266 (352)
T 3fpc_A 235 GVDKVVIAGGD--------VHTFAQAVKMIKPGSDIGNVN 266 (352)
T ss_dssp CEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC--------hHHHHHHHHHHhcCCEEEEec
Confidence 69999853221 135677888999999988753
No 339
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.72 E-value=1 Score=38.67 Aligned_cols=110 Identities=13% Similarity=0.101 Sum_probs=68.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC------------HHHHHHHHhccccCCCceEEEEecCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS------------ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 175 (352)
+++||=-|++.| ++..+++.+...|++|+.+|.+ ...++.+.......+.++.++.+|+.+...-..
T Consensus 10 gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 10 DKVVLVTGGARG-QGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCCh-HHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 678888887665 5555555554478899999987 666665555544455678999999985320000
Q ss_pred -C-----CCCcceEEEehhhhhc----cChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 176 -F-----APESLDIVLLIFVLDA----INPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 176 -~-----~~~~fD~V~~~~~l~~----~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
+ .-+..|+++.+..+.. .+.+++. .+++.+...++.+|.++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 0 0136899888654322 2334333 3345566677778877764
No 340
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=92.52 E-value=0.38 Score=43.20 Aligned_cols=98 Identities=16% Similarity=0.083 Sum_probs=61.6
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeE-EEEEeCCHHHHHHHHhccccCCCceEEEE-----ecCCCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVF-VYGCDFSENAVNILKEHEEYKPDRCHAFV-----CDVTSEDWNPPFAPE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~-----~d~~~~~~~~~~~~~ 179 (352)
++.+||=+|+|. |..+..+++. .|++ |+++|.++.-++.+++. .. .-+.+.. .|+.+..... ....
T Consensus 179 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~l-~~--~~~~~~~~~~~~~~~~~~v~~~-t~g~ 251 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCAKA---AGACPLVITDIDEGRLKFAKEI-CP--EVVTHKVERLSAEESAKKIVES-FGGI 251 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH---TTCCSEEEEESCHHHHHHHHHH-CT--TCEEEECCSCCHHHHHHHHHHH-TSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHh-ch--hcccccccccchHHHHHHHHHH-hCCC
Confidence 478899999865 6777778776 5665 99999999999999876 21 1122211 1110000000 1134
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+-... . ...+..+.++|++||.+++.-
T Consensus 252 g~Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 252 EPAVALECTG-----V---ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp CCSEEEECSC-----C---HHHHHHHHHHSCTTCEEEECC
T ss_pred CCCEEEECCC-----C---hHHHHHHHHHhcCCCEEEEEc
Confidence 6999986422 1 235677888999999988753
No 341
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.39 E-value=0.39 Score=36.12 Aligned_cols=98 Identities=10% Similarity=0.049 Sum_probs=56.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.+|+=+|| |..+..++..+...+.+|+++|.++..++..++.. .+.+..+|..+...-....-..+|+|+..
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~~ 76 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIAV 76 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEEC
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEEe
Confidence 467888877 56666666655436789999999998776655421 24556666543110000112468988775
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
. +.......+..+.+.+.++ .+++.
T Consensus 77 ~-----~~~~~~~~~~~~~~~~~~~-~ii~~ 101 (140)
T 1lss_A 77 T-----GKEEVNLMSSLLAKSYGIN-KTIAR 101 (140)
T ss_dssp C-----SCHHHHHHHHHHHHHTTCC-CEEEE
T ss_pred e-----CCchHHHHHHHHHHHcCCC-EEEEE
Confidence 2 1123334455566667775 44443
No 342
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=92.36 E-value=0.079 Score=40.89 Aligned_cols=101 Identities=15% Similarity=0.227 Sum_probs=59.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC----CCcceE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA----PESLDI 183 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~----~~~fD~ 183 (352)
..-|||+|-|+|+.--.|.+.+ |+..|+++|-.-. .+....++.-.++.+|+.+ .++.. ..+.-+
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~--P~R~I~vfDR~~~------~hp~~~P~~e~~ilGdi~~---tL~~~~~r~g~~a~L 109 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHV--QGREIYVFERAVA------SHPDSTPPEAQLILGDIRE---TLPATLERFGATASL 109 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHC--CSSCEEEEESSCC------CCGGGCCCGGGEEESCHHH---HHHHHHHHHCSCEEE
T ss_pred CCceEEecCCCChhHHHHHHhC--CCCcEEEEEeeec------cCCCCCCchHheecccHHH---HHHHHHHhcCCceEE
Confidence 5679999999999999999988 8889999986321 1112233445677777764 22210 233344
Q ss_pred EEehhhhhccCh--hHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 184 VLLIFVLDAINP--NKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 184 V~~~~~l~~~~~--~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+.+-...++-.. .....+-.-+..+|.|||+++-..
T Consensus 110 aHaD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~ 147 (174)
T 3iht_A 110 VHADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSD 147 (174)
T ss_dssp EEECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred EEeecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCC
Confidence 443332222110 111122234668899999988753
No 343
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.08 E-value=0.2 Score=46.06 Aligned_cols=103 Identities=12% Similarity=0.077 Sum_probs=68.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|+=+|| |.++..+++.+...+..|+++|.++..++.+++. .+.++.+|+++...-....-...|+|++.
T Consensus 4 ~~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv~ 75 (413)
T 3l9w_A 4 GMRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLINA 75 (413)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEEC
T ss_pred CCeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEEC
Confidence 457888877 5577777766644788999999999999888753 25678899875321001123468888764
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY 223 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 223 (352)
. +.+.....+....+.+.|...++.......
T Consensus 76 ~-----~~~~~n~~i~~~ar~~~p~~~Iiara~~~~ 106 (413)
T 3l9w_A 76 I-----DDPQTNLQLTEMVKEHFPHLQIIARARDVD 106 (413)
T ss_dssp C-----SSHHHHHHHHHHHHHHCTTCEEEEEESSHH
T ss_pred C-----CChHHHHHHHHHHHHhCCCCeEEEEECCHH
Confidence 2 223444555666777889888887655443
No 344
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.07 E-value=0.38 Score=38.38 Aligned_cols=99 Identities=13% Similarity=0.145 Sum_probs=58.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCC-CeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC-CCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKND-NVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF-APESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~-~~~~fD~V~ 185 (352)
+.+|+=+|| |..+..+++.+... +..|+++|.++..++.++.. .+..+.+|..+....... .-..+|+|+
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~vi 110 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKLVL 110 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCEEE
Confidence 568888887 45666666555335 77999999999887776542 245666776532100011 124689888
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.... .......+-...+.+.|++.++...
T Consensus 111 ~~~~-----~~~~~~~~~~~~~~~~~~~~ii~~~ 139 (183)
T 3c85_A 111 LAMP-----HHQGNQTALEQLQRRNYKGQIAAIA 139 (183)
T ss_dssp ECCS-----SHHHHHHHHHHHHHTTCCSEEEEEE
T ss_pred EeCC-----ChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 6321 1222223334555667777777653
No 345
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=91.80 E-value=0.69 Score=41.49 Aligned_cols=96 Identities=17% Similarity=0.120 Sum_probs=61.3
Q ss_pred CCCCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC--CCCCC
Q psy11741 105 TCSTKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP--PFAPE 179 (352)
Q Consensus 105 ~~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~--~~~~~ 179 (352)
..++.+||-+|+|. |..+..+++. .|++|+++|.++.-++.+++.-. . ..+ |-....+ .+ .....
T Consensus 187 ~~~g~~VlV~G~G~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~lGa----~-~vi--~~~~~~~~~~v~~~~~g~ 256 (363)
T 3uog_A 187 LRAGDRVVVQGTGGVALFGLQIAKA---TGAEVIVTSSSREKLDRAFALGA----D-HGI--NRLEEDWVERVYALTGDR 256 (363)
T ss_dssp CCTTCEEEEESSBHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHTC----S-EEE--ETTTSCHHHHHHHHHTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH---cCCEEEEEecCchhHHHHHHcCC----C-EEE--cCCcccHHHHHHHHhCCC
Confidence 34588999999875 6677777776 67799999999998888876421 1 111 2110000 00 01133
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+-...- ..+..+.+.|+|||.+++..
T Consensus 257 g~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 287 (363)
T 3uog_A 257 GADHILEIAGG---------AGLGQSLKAVAPDGRISVIG 287 (363)
T ss_dssp CEEEEEEETTS---------SCHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEECCCh---------HHHHHHHHHhhcCCEEEEEe
Confidence 69999865331 23566778999999988764
No 346
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=91.69 E-value=0.65 Score=39.40 Aligned_cols=110 Identities=13% Similarity=-0.032 Sum_probs=66.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC-CCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN-DNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
+++||=.| |+|.++..+++.+.. .+.+|++++.++..++.+.+.+...+.++.++.+|+.+...-.. + .-+.
T Consensus 4 ~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 4 IHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 56777666 567778888877765 67899999999876666555444334568899999875310000 0 0136
Q ss_pred ceEEEehhhhhcc-----C-hhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLDAI-----N-PNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~~-----~-~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+|+.+...... + .+++. .+++.+.+.++++|.+++.
T Consensus 83 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~ 137 (276)
T 1wma_A 83 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNV 137 (276)
T ss_dssp EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEE
Confidence 8998875533211 1 12222 3445566666667777664
No 347
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=91.63 E-value=0.22 Score=44.33 Aligned_cols=95 Identities=15% Similarity=0.222 Sum_probs=59.3
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCC--CCcceE
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFA--PESLDI 183 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~--~~~fD~ 183 (352)
++.+||-+|+|. |..+..+++. .|++|+++|.++.-++.+++.- . . ...|..+........ .+.+|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~lG----a--~-~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYAKA---MGLNVVAVDIGDEKLELAKELG----A--D-LVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHHHH---TTCEEEEECSCHHHHHHHHHTT----C--S-EEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHCC----C--C-EEecCCCccHHHHHHHHhCCCCE
Confidence 478999999853 5566666665 5679999999999888887531 1 1 112333211000000 046899
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
|+..... ...++.+.++|+++|.+++..
T Consensus 234 vid~~g~--------~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 234 AVVTAVS--------KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp EEESSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred EEECCCC--------HHHHHHHHHHhhcCCEEEEec
Confidence 8764321 235677888999999988753
No 348
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=91.57 E-value=0.12 Score=45.98 Aligned_cols=95 Identities=15% Similarity=0.114 Sum_probs=60.2
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCCCc
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAPES 180 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~~~ 180 (352)
.++.+||-.|+ |.|..+..+++. .|++|+++|.++.-++.+.+... .. ...|..+.... . ....+.
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~~g---~~---~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARL---KGCRVVGIAGGAEKCRFLVEELG---FD---GAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTTC---CS---EEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHcC---CC---EEEECCCHHHHHHHHHhcCCC
Confidence 35889999998 456666677765 67799999999998888833321 11 11233221100 0 001346
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+|+.+..- ..+..+.+.|++||.+++.
T Consensus 219 ~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~ 247 (336)
T 4b7c_A 219 IDVFFDNVGG---------EILDTVLTRIAFKARIVLC 247 (336)
T ss_dssp EEEEEESSCH---------HHHHHHHTTEEEEEEEEEC
T ss_pred ceEEEECCCc---------chHHHHHHHHhhCCEEEEE
Confidence 9998864321 2577788999999998874
No 349
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=91.57 E-value=0.061 Score=48.48 Aligned_cols=95 Identities=19% Similarity=0.203 Sum_probs=58.1
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCC-CCCCCCCCCcceEE
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSE-DWNPPFAPESLDIV 184 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~~~~~~fD~V 184 (352)
++.+||-+|+|. |..+..+++. .|++|+++|.|+.-++.+++.-. . ..+ |..+. .+..... +.+|+|
T Consensus 179 ~g~~VlV~GaG~vG~~~~qlak~---~Ga~Vi~~~~~~~~~~~~~~lGa---~--~v~--~~~~~~~~~~~~~-~~~D~v 247 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLISKA---MGAETYVISRSSRKREDAMKMGA---D--HYI--ATLEEGDWGEKYF-DTFDLI 247 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HTCEEEEEESSSTTHHHHHHHTC---S--EEE--EGGGTSCHHHHSC-SCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCEEEEEcCCHHHHHHHHHcCC---C--EEE--cCcCchHHHHHhh-cCCCEE
Confidence 478999999854 6667777776 46689999999988888876321 1 111 22211 0000011 479999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+...... + ...++.+.++|++||.++..
T Consensus 248 id~~g~~--~----~~~~~~~~~~l~~~G~iv~~ 275 (360)
T 1piw_A 248 VVCASSL--T----DIDFNIMPKAMKVGGRIVSI 275 (360)
T ss_dssp EECCSCS--T----TCCTTTGGGGEEEEEEEEEC
T ss_pred EECCCCC--c----HHHHHHHHHHhcCCCEEEEe
Confidence 8644320 0 01244567889999998874
No 350
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=91.45 E-value=0.82 Score=38.79 Aligned_cols=113 Identities=15% Similarity=0.130 Sum_probs=67.5
Q ss_pred CCCCeEEEEcCC-ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC------CCCCC
Q psy11741 106 CSTKNILEIGCG-VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN------PPFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG-~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~ 178 (352)
.++++||=.|++ +|.++..+++.+...|++|+.++.+....+.+++..... ..+.++.+|+.+...- ..-.-
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF-GSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc-CCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 347899999875 356667776666447889999998865544444433322 3478899999853200 00001
Q ss_pred CcceEEEehhhhhc-----------cChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 179 ESLDIVLLIFVLDA-----------INPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~-----------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
+..|+++.+..+.. .+.+++. .+++.+...++++|.++...
T Consensus 91 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~is 153 (271)
T 3ek2_A 91 DSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLS 153 (271)
T ss_dssp SCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEe
Confidence 46899988654321 3334333 33445556666678776643
No 351
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=91.30 E-value=0.68 Score=41.12 Aligned_cols=96 Identities=17% Similarity=0.167 Sum_probs=60.8
Q ss_pred CCCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCC-CCC--C-CCCC
Q psy11741 105 TCSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSE-DWN--P-PFAP 178 (352)
Q Consensus 105 ~~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~--~-~~~~ 178 (352)
..++.+||-.|| |.|..+..+++. .|++|+++|.++..++.+++... ... ..|..+. ... + ....
T Consensus 153 ~~~g~~vlI~Ga~g~iG~~~~~~a~~---~G~~V~~~~~~~~~~~~~~~~~g---~~~---~~d~~~~~~~~~~~~~~~~ 223 (345)
T 2j3h_A 153 PKEGETVYVSAASGAVGQLVGQLAKM---MGCYVVGSAGSKEKVDLLKTKFG---FDD---AFNYKEESDLTAALKRCFP 223 (345)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTSC---CSE---EEETTSCSCSHHHHHHHCT
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHHcC---Cce---EEecCCHHHHHHHHHHHhC
Confidence 345889999997 456666666665 56799999999998888874321 111 1243321 000 0 0012
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+.+|+|+.... . ..+..+.+.|++||.+++.
T Consensus 224 ~~~d~vi~~~g-------~--~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 224 NGIDIYFENVG-------G--KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp TCEEEEEESSC-------H--HHHHHHHTTEEEEEEEEEC
T ss_pred CCCcEEEECCC-------H--HHHHHHHHHHhcCCEEEEE
Confidence 46999886432 1 2577788999999998874
No 352
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=91.27 E-value=0.65 Score=41.83 Aligned_cols=96 Identities=10% Similarity=0.068 Sum_probs=60.5
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 178 (352)
.++.+||-+|+|. |..+..+++. .+. +|+++|.++.-++.+++.-. . .. .|..+....+ ....
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla~~---~Ga~~Vi~~~~~~~~~~~~~~lGa---~--~v--i~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGCHS---AGAKRIIAVDLNPDKFEKAKVFGA---T--DF--VNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEECSCGGGHHHHHHTTC---C--EE--ECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEEcCCHHHHHHHHHhCC---c--eE--EeccccchhHHHHHHHHhC
Confidence 3478999999865 6677777776 566 89999999998888875421 1 11 1222100000 0012
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
+.+|+|+-.... ...+..+.++|+|| |.+++.-
T Consensus 261 ~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 294 (374)
T 1cdo_A 261 GGVDFSLECVGN--------VGVMRNALESCLKGWGVSVLVG 294 (374)
T ss_dssp SCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHhhcCCcEEEEEc
Confidence 368998853221 23567788999999 9988753
No 353
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=91.23 E-value=0.26 Score=43.93 Aligned_cols=94 Identities=13% Similarity=0.106 Sum_probs=60.4
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEE----ecCCCCCCCCCCCCCcc
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFV----CDVTSEDWNPPFAPESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~----~d~~~~~~~~~~~~~~f 181 (352)
++.+||-+|+|. |..+..+++... +|++|+++|.|+.-++.+++.-. . ..+. .|... .+. ....+
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~-~Ga~Vi~~~~~~~~~~~~~~lGa---~--~vi~~~~~~~~~~---~~~-~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALM-KNITIVGISRSKKHRDFALELGA---D--YVSEMKDAESLIN---KLT-DGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHC-TTCEEEEECSCHHHHHHHHHHTC---S--EEECHHHHHHHHH---HHH-TTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhc-CCCEEEEEeCCHHHHHHHHHhCC---C--EEeccccchHHHH---Hhh-cCCCc
Confidence 388999999964 667777777631 27799999999998888876421 1 1111 11110 011 12369
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|+|+-.... ...++.+.++|+|||.+++.
T Consensus 240 D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~ 268 (344)
T 2h6e_A 240 SIAIDLVGT--------EETTYNLGKLLAQEGAIILV 268 (344)
T ss_dssp EEEEESSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred cEEEECCCC--------hHHHHHHHHHhhcCCEEEEe
Confidence 999864321 23567788999999998874
No 354
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=91.18 E-value=0.97 Score=40.87 Aligned_cols=78 Identities=14% Similarity=0.096 Sum_probs=49.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC-----CCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN-----DNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~-----~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD 182 (352)
+..|+|+|.|+|.++..+++.+.. ...+++.||+|+...+.-++++.... ++.+.. ++. .+| ++ .-
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~~~-~v~W~~-~l~----~lp--~~-~~ 151 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAGIR-NIHWHD-SFE----DVP--EG-PA 151 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTTCS-SEEEES-SGG----GSC--CS-SE
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcCCC-CeEEeC-Chh----hcC--CC-Ce
Confidence 457999999999999888765421 34589999999987776555543321 354432 222 122 22 34
Q ss_pred EEEehhhhhccC
Q psy11741 183 IVLLIFVLDAIN 194 (352)
Q Consensus 183 ~V~~~~~l~~~~ 194 (352)
+|+++.++..++
T Consensus 152 ~viANE~fDAlP 163 (387)
T 1zkd_A 152 VILANEYFDVLP 163 (387)
T ss_dssp EEEEESSGGGSC
T ss_pred EEEeccccccCc
Confidence 666666665553
No 355
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=91.15 E-value=0.19 Score=44.89 Aligned_cols=95 Identities=19% Similarity=0.159 Sum_probs=59.7
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-C-CCCCc
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-P-FAPES 180 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~-~~~~~ 180 (352)
++.+||-+|+|. |..+..+++. .|+ +|+++|.++.-++.+++.-. . .. .|..+..+. + . .....
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~---~Ga~~Vi~~~~~~~~~~~~~~~Ga---~--~~--~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKA---SGAYPVIVSEPSDFRRELAKKVGA---D--YV--INPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH---TTCCSEEEECSCHHHHHHHHHHTC---S--EE--ECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHhCC---C--EE--ECCCCcCHHHHHHHHcCCCC
Confidence 488999999953 5666667765 566 89999999998888875321 1 11 222211000 0 0 01236
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+..... ...++.+.+.|+++|.++...
T Consensus 237 ~D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 237 VDVFLEFSGA--------PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEEECSCC--------HHHHHHHHHHEEEEEEEEECC
T ss_pred CCEEEECCCC--------HHHHHHHHHHHhcCCEEEEEc
Confidence 9999864321 235677888999999988753
No 356
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=91.14 E-value=0.13 Score=46.70 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=60.9
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 178 (352)
.++.+||=+|+|. |..+..+++. .++ +|+++|.++.-++.+++.-. . .. .|..+....+ ...+
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a~~---~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~v--i~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGAKT---AGASRIIGIDIDSKKYETAKKFGV----N-EF--VNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHH---HTCSCEEEECSCTTHHHHHHTTTC----C-EE--ECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEcCCHHHHHHHHHcCC----c-EE--EccccCchhHHHHHHHhcC
Confidence 3578999999864 6777777776 455 79999999999998876421 1 11 1221100000 0113
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
+.+|+|+-... -...+..+.+.|++| |.+++.-
T Consensus 262 gg~D~vid~~g--------~~~~~~~~~~~l~~g~G~iv~~G 295 (378)
T 3uko_A 262 GGVDYSFECIG--------NVSVMRAALECCHKGWGTSVIVG 295 (378)
T ss_dssp SCBSEEEECSC--------CHHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCEEEECCC--------CHHHHHHHHHHhhccCCEEEEEc
Confidence 47999986422 124577788999997 9988754
No 357
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=91.13 E-value=0.43 Score=42.46 Aligned_cols=94 Identities=18% Similarity=0.159 Sum_probs=60.6
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC-C-CCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP-P-FAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~-~-~~~~ 179 (352)
.++.+||-.|+ |.|..+..+++. .+.+|+++|.++..++.+++.- .. . ..|..+... .+ . ....
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~---~G~~Vi~~~~~~~~~~~~~~~g----a~-~--~~d~~~~~~~~~~~~~~~~~ 234 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKL---FGARVIATAGSEDKLRRAKALG----AD-E--TVNYTHPDWPKEVRRLTGGK 234 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHT----CS-E--EEETTSTTHHHHHHHHTTTT
T ss_pred CCCCEEEEECCCchHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHhcC----CC-E--EEcCCcccHHHHHHHHhCCC
Confidence 34789999998 566677777765 5679999999999888886531 11 1 124332110 00 0 1124
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+.... . ..++.+.+.|+++|.+++.
T Consensus 235 ~~d~vi~~~g-~--------~~~~~~~~~l~~~G~~v~~ 264 (343)
T 2eih_A 235 GADKVVDHTG-A--------LYFEGVIKATANGGRIAIA 264 (343)
T ss_dssp CEEEEEESSC-S--------SSHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC-H--------HHHHHHHHhhccCCEEEEE
Confidence 6999986543 1 2366778899999988874
No 358
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=91.00 E-value=0.21 Score=44.59 Aligned_cols=95 Identities=21% Similarity=0.273 Sum_probs=59.1
Q ss_pred CCCeEEEEcCC--ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCC-Cc
Q psy11741 107 STKNILEIGCG--VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAP-ES 180 (352)
Q Consensus 107 ~~~~vLD~GcG--~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~-~~ 180 (352)
++.+||-.|+| .|..+..+++.. .+++|+++|.++..++.+++.- ... ..|..+.... . .... +.
T Consensus 170 ~g~~vlV~Gagg~iG~~~~~~a~~~--~Ga~Vi~~~~~~~~~~~~~~~g----~~~---~~~~~~~~~~~~~~~~~~~~~ 240 (347)
T 1jvb_A 170 PTKTLLVVGAGGGLGTMAVQIAKAV--SGATIIGVDVREEAVEAAKRAG----ADY---VINASMQDPLAEIRRITESKG 240 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHH--TCCEEEEEESSHHHHHHHHHHT----CSE---EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCccHHHHHHHHHHHc--CCCeEEEEcCCHHHHHHHHHhC----CCE---EecCCCccHHHHHHHHhcCCC
Confidence 47899999997 445555666652 2779999999999888886531 111 1232221100 0 0111 47
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+|+....- ...++.+.++|+|+|.+++.
T Consensus 241 ~d~vi~~~g~--------~~~~~~~~~~l~~~G~iv~~ 270 (347)
T 1jvb_A 241 VDAVIDLNNS--------EKTLSVYPKALAKQGKYVMV 270 (347)
T ss_dssp EEEEEESCCC--------HHHHTTGGGGEEEEEEEEEC
T ss_pred ceEEEECCCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 9999864321 23567778899999998874
No 359
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.97 E-value=0.92 Score=40.81 Aligned_cols=96 Identities=11% Similarity=0.102 Sum_probs=60.2
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 178 (352)
.++.+||-+|+|. |..+..+++. .+. +|+++|.++.-++.+++.-. . .. .|..+....+ ....
T Consensus 190 ~~g~~VlV~GaG~vG~~a~qla~~---~Ga~~Vi~~~~~~~~~~~~~~lGa----~-~v--i~~~~~~~~~~~~~~~~~~ 259 (374)
T 2jhf_A 190 TQGSTCAVFGLGGVGLSVIMGCKA---AGAARIIGVDINKDKFAKAKEVGA----T-EC--VNPQDYKKPIQEVLTEMSN 259 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEECSCGGGHHHHHHTTC----S-EE--ECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEcCCHHHHHHHHHhCC----c-eE--ecccccchhHHHHHHHHhC
Confidence 3478999999865 6677777776 566 89999999998888875421 1 11 1222100000 0112
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
+.+|+|+-...- ...+..+.++|+++ |.+++.-
T Consensus 260 ~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (374)
T 2jhf_A 260 GGVDFSFEVIGR--------LDTMVTALSCCQEAYGVSVIVG 293 (374)
T ss_dssp SCBSEEEECSCC--------HHHHHHHHHHBCTTTCEEEECS
T ss_pred CCCcEEEECCCC--------HHHHHHHHHHhhcCCcEEEEec
Confidence 368998754221 23567788899999 9988743
No 360
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.93 E-value=2 Score=36.27 Aligned_cols=81 Identities=21% Similarity=0.179 Sum_probs=52.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CC------CCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FA------PES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~------~~~ 180 (352)
+++||=.|++ |.++..+++.+...|++|++++.++..++...+.....+.++.++.+|+.+...-.. +. .+.
T Consensus 9 ~k~vlVTGas-~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 9 GCTALVTGGS-RGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TCEEEEESCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 6778877765 455666666554478899999999877766544443334568888999875310000 00 157
Q ss_pred ceEEEehhh
Q psy11741 181 LDIVLLIFV 189 (352)
Q Consensus 181 fD~V~~~~~ 189 (352)
.|+++.+..
T Consensus 88 id~lv~~Ag 96 (260)
T 2ae2_A 88 LNILVNNAG 96 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899888654
No 361
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=90.92 E-value=0.44 Score=36.80 Aligned_cols=102 Identities=8% Similarity=0.008 Sum_probs=61.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC-HHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS-ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s-~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
..+|+=+|| |..+..+++.+...+..|+++|.+ +...+...... ...+.++.+|..+...-....-...|+|++
T Consensus 3 ~~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~---~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 3 KDHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL---GDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH---CTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh---cCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 456777775 677777777664467899999997 44443333221 123678889886432100111246788876
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.. +.+.....+....+.+.|...++...
T Consensus 78 ~~-----~~d~~n~~~~~~a~~~~~~~~ii~~~ 105 (153)
T 1id1_A 78 LS-----DNDADNAFVVLSAKDMSSDVKTVLAV 105 (153)
T ss_dssp CS-----SCHHHHHHHHHHHHHHTSSSCEEEEC
T ss_pred ec-----CChHHHHHHHHHHHHHCCCCEEEEEE
Confidence 42 22344455566667777777777653
No 362
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.67 E-value=0.39 Score=37.21 Aligned_cols=100 Identities=20% Similarity=0.158 Sum_probs=55.5
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CCCCcceEEE
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~~fD~V~ 185 (352)
++.+|+=+|| |.++..+++.+...+.+|+++|.++..++.++. ...+..+.+|..+.. .+. ..-..+|+|+
T Consensus 18 ~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~-----~~g~~~~~~d~~~~~-~l~~~~~~~ad~Vi 89 (155)
T 2g1u_A 18 KSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS-----EFSGFTVVGDAAEFE-TLKECGMEKADMVF 89 (155)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT-----TCCSEEEESCTTSHH-HHHTTTGGGCSEEE
T ss_pred CCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh-----cCCCcEEEecCCCHH-HHHHcCcccCCEEE
Confidence 3678999987 455665555553367899999999875443321 122445556654211 010 1124588887
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.... .......+..+.+.+.|...++...
T Consensus 90 ~~~~-----~~~~~~~~~~~~~~~~~~~~iv~~~ 118 (155)
T 2g1u_A 90 AFTN-----DDSTNFFISMNARYMFNVENVIARV 118 (155)
T ss_dssp ECSS-----CHHHHHHHHHHHHHTSCCSEEEEEC
T ss_pred EEeC-----CcHHHHHHHHHHHHHCCCCeEEEEE
Confidence 6432 2333444445555556666666643
No 363
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.55 E-value=0.76 Score=41.32 Aligned_cols=97 Identities=12% Similarity=0.079 Sum_probs=60.6
Q ss_pred CCCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCC
Q psy11741 105 TCSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFA 177 (352)
Q Consensus 105 ~~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~ 177 (352)
..++.+||-+|+|. |..+..+++. .+. +|+++|.|+..++.+++.-. . .. .|..+....+ ...
T Consensus 188 ~~~g~~VlV~GaG~vG~~avqla~~---~Ga~~Vi~~~~~~~~~~~~~~lGa---~--~v--i~~~~~~~~~~~~v~~~~ 257 (373)
T 2fzw_A 188 LEPGSVCAVFGLGGVGLAVIMGCKV---AGASRIIGVDINKDKFARAKEFGA---T--EC--INPQDFSKPIQEVLIEMT 257 (373)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH---HTCSEEEEECSCGGGHHHHHHHTC---S--EE--ECGGGCSSCHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEcCCHHHHHHHHHcCC---c--eE--eccccccccHHHHHHHHh
Confidence 34578999999865 6677777776 455 89999999998888875421 1 11 1222100000 011
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
.+.+|+|+-.... ...+..+.++|+|+ |.+++.-
T Consensus 258 ~~g~D~vid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 292 (373)
T 2fzw_A 258 DGGVDYSFECIGN--------VKVMRAALEACHKGWGVSVVVG 292 (373)
T ss_dssp TSCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECS
T ss_pred CCCCCEEEECCCc--------HHHHHHHHHhhccCCcEEEEEe
Confidence 2369998854221 23567788999999 9988753
No 364
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=90.47 E-value=0.44 Score=43.54 Aligned_cols=101 Identities=18% Similarity=0.147 Sum_probs=58.4
Q ss_pred CCCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-----CCCCC
Q psy11741 105 TCSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-----NPPFA 177 (352)
Q Consensus 105 ~~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~ 177 (352)
..++.+||=+|+|. |..+..+++. .|+ +|+++|.++.-++.+++.-.. .. .|..+..+ .+ ..
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~~~~lGa~-----~v--i~~~~~~~~~~i~~~-t~ 279 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKH---AGASKVILSEPSEVRRNLAKELGAD-----HV--IDPTKENFVEAVLDY-TN 279 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEECSCHHHHHHHHHHTCS-----EE--ECTTTSCHHHHHHHH-TT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHcCCC-----EE--EcCCCCCHHHHHHHH-hC
Confidence 34588999999864 5666777775 566 899999999999988765211 11 12221100 00 11
Q ss_pred CCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 178 PESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 178 ~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
...+|+|+-...-. ......+++.+.+.+++||.+++.-
T Consensus 280 g~g~D~vid~~g~~---~~~~~~~~~~l~~~~~~~G~iv~~G 318 (404)
T 3ip1_A 280 GLGAKLFLEATGVP---QLVWPQIEEVIWRARGINATVAIVA 318 (404)
T ss_dssp TCCCSEEEECSSCH---HHHHHHHHHHHHHCSCCCCEEEECS
T ss_pred CCCCCEEEECCCCc---HHHHHHHHHHHHhccCCCcEEEEeC
Confidence 23699998532211 0122233333334459999988853
No 365
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.46 E-value=0.83 Score=41.11 Aligned_cols=96 Identities=10% Similarity=0.006 Sum_probs=60.3
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 178 (352)
.++.+||-+|+|. |..+..+++. .++ +|+++|.++.-++.+++.-. . .. .|..+....+ ....
T Consensus 190 ~~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~v--i~~~~~~~~~~~~i~~~t~ 259 (373)
T 1p0f_A 190 TPGSTCAVFGLGGVGFSAIVGCKA---AGASRIIGVGTHKDKFPKAIELGA----T-EC--LNPKDYDKPIYEVICEKTN 259 (373)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---HTCSEEEEECSCGGGHHHHHHTTC----S-EE--ECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEECCCHHHHHHHHHcCC----c-EE--EecccccchHHHHHHHHhC
Confidence 3578999999865 6677777776 455 89999999998888875421 1 11 1221100000 0112
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
+.+|+|+-...- ...+..+.++|+++ |.+++.-
T Consensus 260 gg~Dvvid~~g~--------~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 260 GGVDYAVECAGR--------IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp SCBSEEEECSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCCCEEEECCCC--------HHHHHHHHHHHhcCCCEEEEEc
Confidence 379999854221 23567788999999 9988743
No 366
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=90.40 E-value=2.7 Score=36.23 Aligned_cols=112 Identities=14% Similarity=0.086 Sum_probs=66.9
Q ss_pred CCCeEEEEcCCcc-ccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC------CCCC
Q psy11741 107 STKNILEIGCGVG-NSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP------FAPE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~G-~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~~ 179 (352)
.++++|=.|+++| .++..+++.+...|++|+.++.++...+.+.+..... .++.++.+|+.+...-.. -.-+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 108 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL-GAFVAGHCDVADAASIDAVFETLEKKWG 108 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH-TCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc-CCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence 3778898887643 3555555554337889999999876555444433222 357888999985320000 0014
Q ss_pred cceEEEehhhhh----------ccChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLD----------AINPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~----------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
..|+++.+..+. ..+.+++. .+++.+...++.+|.++...
T Consensus 109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~is 169 (293)
T 3grk_A 109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLT 169 (293)
T ss_dssp CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEE
T ss_pred CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 689988765432 22333333 34556667777888877653
No 367
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=90.33 E-value=0.98 Score=40.78 Aligned_cols=96 Identities=15% Similarity=0.046 Sum_probs=58.9
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCC-eEEEEEeCCHHHHHHHHhccccCCCceEEEEe------cCCCCCCCCCCCC
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDN-VFVYGCDFSENAVNILKEHEEYKPDRCHAFVC------DVTSEDWNPPFAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~------d~~~~~~~~~~~~ 178 (352)
++.+||-+|+|. |..+..+++. .| .+|+++|.|+.-++.+++.-. . ..+.. |+.+..... ...
T Consensus 195 ~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~~~~lGa----~-~vi~~~~~~~~~~~~~v~~~-~~g 265 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIARS---LGAENVIVIAGSPNRLKLAEEIGA----D-LTLNRRETSVEERRKAIMDI-THG 265 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHH---TTBSEEEEEESCHHHHHHHHHTTC----S-EEEETTTSCHHHHHHHHHHH-TTT
T ss_pred CCCEEEEECcCHHHHHHHHHHHH---cCCceEEEEcCCHHHHHHHHHcCC----c-EEEeccccCcchHHHHHHHH-hCC
Confidence 478999999653 5666777776 56 599999999999888875321 1 11111 100000000 012
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
..+|+|+-.... ...+..+.++|+++|.+++.-
T Consensus 266 ~g~Dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~G 298 (380)
T 1vj0_A 266 RGADFILEATGD--------SRALLEGSELLRRGGFYSVAG 298 (380)
T ss_dssp SCEEEEEECSSC--------TTHHHHHHHHEEEEEEEEECC
T ss_pred CCCcEEEECCCC--------HHHHHHHHHHHhcCCEEEEEe
Confidence 369999864321 124667788999999988753
No 368
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.30 E-value=0.9 Score=40.89 Aligned_cols=96 Identities=11% Similarity=0.034 Sum_probs=60.1
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-----CCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-----PFAP 178 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 178 (352)
.++.+||-+|+|. |..+..+++. .++ +|+++|.++.-++.+++.-. . .. .|..+....+ ....
T Consensus 194 ~~g~~VlV~GaG~vG~~aiqlak~---~Ga~~Vi~~~~~~~~~~~a~~lGa----~-~v--i~~~~~~~~~~~~v~~~~~ 263 (376)
T 1e3i_A 194 TPGSTCAVFGLGCVGLSAIIGCKI---AGASRIIAIDINGEKFPKAKALGA----T-DC--LNPRELDKPVQDVITELTA 263 (376)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHH---TTCSEEEEECSCGGGHHHHHHTTC----S-EE--ECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCCeEEEEcCCHHHHHHHHHhCC----c-EE--EccccccchHHHHHHHHhC
Confidence 3478999999864 6677777776 566 89999999998888875421 1 11 1222100000 0012
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCC-EEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPG-GMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~Lkpg-G~l~~~~ 219 (352)
+.+|+|+-...- ...+..+.++|++| |.+++.-
T Consensus 264 ~g~Dvvid~~G~--------~~~~~~~~~~l~~~~G~iv~~G 297 (376)
T 1e3i_A 264 GGVDYSLDCAGT--------AQTLKAAVDCTVLGWGSCTVVG 297 (376)
T ss_dssp SCBSEEEESSCC--------HHHHHHHHHTBCTTTCEEEECC
T ss_pred CCccEEEECCCC--------HHHHHHHHHHhhcCCCEEEEEC
Confidence 368998753211 23567788999999 9988743
No 369
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.26 E-value=2.6 Score=35.86 Aligned_cols=86 Identities=9% Similarity=0.125 Sum_probs=57.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
.++||=.|| |.++..+++.+...+.+|++++-++........ .+++++.+|+.+. . -..+|+|+..
T Consensus 5 ~~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~------~~~~~~~~D~~d~----~--~~~~d~vi~~ 70 (286)
T 3ius_A 5 TGTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA------SGAEPLLWPGEEP----S--LDGVTHLLIS 70 (286)
T ss_dssp CCEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH------TTEEEEESSSSCC----C--CTTCCEEEEC
T ss_pred cCcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh------CCCeEEEeccccc----c--cCCCCEEEEC
Confidence 368999994 889988888775578899999998865544332 3588999999862 2 3468998876
Q ss_pred hhhhccChhHHHHHHHHHHH
Q psy11741 188 FVLDAINPNKMQHVINQVYK 207 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~ 207 (352)
.............+++.+.+
T Consensus 71 a~~~~~~~~~~~~l~~a~~~ 90 (286)
T 3ius_A 71 TAPDSGGDPVLAALGDQIAA 90 (286)
T ss_dssp CCCBTTBCHHHHHHHHHHHH
T ss_pred CCccccccHHHHHHHHHHHh
Confidence 55432222233444444444
No 370
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.15 E-value=0.29 Score=43.02 Aligned_cols=87 Identities=10% Similarity=0.122 Sum_probs=57.1
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
.++.+||=+|+|. |..+..+++. .|++|++++ |+.-++.+++.-. .....| .+ .+ .+.+|+|
T Consensus 141 ~~g~~VlV~GaG~vG~~a~qlak~---~Ga~Vi~~~-~~~~~~~~~~lGa------~~v~~d-~~---~v---~~g~Dvv 203 (315)
T 3goh_A 141 TKQREVLIVGFGAVNNLLTQMLNN---AGYVVDLVS-ASLSQALAAKRGV------RHLYRE-PS---QV---TQKYFAI 203 (315)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHH---HTCEEEEEC-SSCCHHHHHHHTE------EEEESS-GG---GC---CSCEEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH---cCCEEEEEE-ChhhHHHHHHcCC------CEEEcC-HH---Hh---CCCccEE
Confidence 3588999999953 6777778876 566999999 9988888876421 111123 11 22 5679999
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+-...- + .+..+.++|+|+|.++..
T Consensus 204 ~d~~g~-----~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 204 FDAVNS-----Q----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp ECC----------------TTGGGEEEEEEEEEE
T ss_pred EECCCc-----h----hHHHHHHHhcCCCEEEEE
Confidence 853221 1 124567899999998876
No 371
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=90.14 E-value=0.3 Score=40.33 Aligned_cols=100 Identities=9% Similarity=0.008 Sum_probs=62.1
Q ss_pred eEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEehhh
Q psy11741 110 NILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFV 189 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~ 189 (352)
+|+=+|+ |.++..+++.+...+..|+++|.++..++...+.. .+.++.+|..+...-....-...|+|++..
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~- 73 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILT- 73 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECC-
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEec-
Confidence 4566665 77888888777547889999999998877654331 256788888753110001124688888642
Q ss_pred hhccChhHHHHHHHHHHHhcCCCEEEEEEeCC
Q psy11741 190 LDAINPNKMQHVINQVYKYLKPGGMVLFRDYG 221 (352)
Q Consensus 190 l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 221 (352)
+.+.....+..+.+.+.|...++....+
T Consensus 74 ----~~d~~n~~~~~~a~~~~~~~~iia~~~~ 101 (218)
T 3l4b_C 74 ----PRDEVNLFIAQLVMKDFGVKRVVSLVND 101 (218)
T ss_dssp ----SCHHHHHHHHHHHHHTSCCCEEEECCCS
T ss_pred ----CCcHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 2233445556666666677676664433
No 372
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=90.11 E-value=1.5 Score=37.15 Aligned_cols=110 Identities=9% Similarity=-0.013 Sum_probs=65.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEE-eCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGC-DFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|++.| ++..+++.+...|++|+.+ +.++...+.+.+.....+.++.++.+|+.+...-.. + .-+.
T Consensus 8 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 8 NRTIVVAGAGRD-IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 678888887665 5555555554478899888 666666665555544445678899999985320000 0 0146
Q ss_pred ceEEEehhhhh-------ccChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLD-------AINPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~-------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
.|+++.+.... ..+.+++. .+.+.+...++++|.++..
T Consensus 87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~i 142 (259)
T 3edm_A 87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTF 142 (259)
T ss_dssp EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 89988765322 22333333 3344555666667777664
No 373
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=90.07 E-value=1.4 Score=39.25 Aligned_cols=95 Identities=17% Similarity=0.242 Sum_probs=59.6
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~~ 179 (352)
.++.+||-.|+ |.|..+..+++. .|++|+++|.++..++.+++.- .. ...|..+.... + .....
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~g----a~---~~~d~~~~~~~~~~~~~~~~~ 238 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARA---YGLKILGTAGTEEGQKIVLQNG----AH---EVFNHREVNYIDKIKKYVGEK 238 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTT----CS---EEEETTSTTHHHHHHHHHCTT
T ss_pred CCcCEEEEECCCChHHHHHHHHHHH---CCCEEEEEeCChhHHHHHHHcC----CC---EEEeCCCchHHHHHHHHcCCC
Confidence 34789999997 445566666665 6779999999998888776531 11 11233321100 0 01123
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+.+..- ..+....+.|+++|.+++.-
T Consensus 239 ~~D~vi~~~G~---------~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 239 GIDIIIEMLAN---------VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp CEEEEEESCHH---------HHHHHHHHHEEEEEEEEECC
T ss_pred CcEEEEECCCh---------HHHHHHHHhccCCCEEEEEe
Confidence 69999865331 24567789999999988753
No 374
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=90.04 E-value=0.17 Score=45.19 Aligned_cols=93 Identities=18% Similarity=0.162 Sum_probs=57.8
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCCCcc
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAPESL 181 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~~~f 181 (352)
++.+||-+|+|. |..+..+++. .|+ +|+++|.++.-++.+++. .. . ..|..+..+. + ......+
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a~~---~Ga~~Vi~~~~~~~~~~~~~~l-a~-----~--v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVVRA---SGAGPILVSDPNPYRLAFARPY-AD-----R--LVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHHHH---TTCCSEEEECSCHHHHGGGTTT-CS-----E--EECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---cCCCEEEEECCCHHHHHHHHHh-HH-----h--ccCcCccCHHHHHHHhcCCCC
Confidence 478999999854 5666677765 566 899999999877766543 11 1 1222211000 0 0002468
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|+|+....- ...++...+.|+++|.+++.
T Consensus 233 D~vid~~g~--------~~~~~~~~~~l~~~G~iv~~ 261 (343)
T 2dq4_A 233 EVLLEFSGN--------EAAIHQGLMALIPGGEARIL 261 (343)
T ss_dssp EEEEECSCC--------HHHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCCC--------HHHHHHHHHHHhcCCEEEEE
Confidence 999864321 23567788899999998875
No 375
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=90.01 E-value=0.2 Score=45.13 Aligned_cols=95 Identities=15% Similarity=0.182 Sum_probs=61.0
Q ss_pred CCCeEEEEc-C-CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-C-CCCCCCcce
Q psy11741 107 STKNILEIG-C-GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-N-PPFAPESLD 182 (352)
Q Consensus 107 ~~~~vLD~G-c-G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~-~~~~~~~fD 182 (352)
++.+||=.| + |.|..+..+++.. .+.+|+++|.++.-++.+++.-. . .. .|..+... . .....+.+|
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~--~g~~Vi~~~~~~~~~~~~~~lGa---d--~v--i~~~~~~~~~v~~~~~~g~D 241 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQR--TDLTVIATASRPETQEWVKSLGA---H--HV--IDHSKPLAAEVAALGLGAPA 241 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHH--CCSEEEEECSSHHHHHHHHHTTC---S--EE--ECTTSCHHHHHHTTCSCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHh--cCCEEEEEeCCHHHHHHHHHcCC---C--EE--EeCCCCHHHHHHHhcCCCce
Confidence 477899998 4 4477888888764 56799999999998888876421 1 11 12111000 0 011245799
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+-... -...+..+.++|+|||.+++.
T Consensus 242 vvid~~g--------~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 242 FVFSTTH--------TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEECSC--------HHHHHHHHHHHSCTTCEEEEC
T ss_pred EEEECCC--------chhhHHHHHHHhcCCCEEEEE
Confidence 9876321 124567788899999998875
No 376
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=89.98 E-value=0.43 Score=42.71 Aligned_cols=90 Identities=14% Similarity=0.156 Sum_probs=56.7
Q ss_pred CeEEEEcCCc-cccH-HHHH-hhcCCCCeE-EEEEeCCHH---HHHHHHhccccCCCceEEEEecCCCCCCCC--CCCCC
Q psy11741 109 KNILEIGCGV-GNSV-FPIV-EHCKNDNVF-VYGCDFSEN---AVNILKEHEEYKPDRCHAFVCDVTSEDWNP--PFAPE 179 (352)
Q Consensus 109 ~~vLD~GcG~-G~~~-~~l~-~~~~~~~~~-v~gvD~s~~---~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~~~~ 179 (352)
.+||-+|+|. |..+ ..++ +. .|++ |+++|.++. -++.+++.- ...+ |..+..+.. .. .+
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~---~Ga~~Vi~~~~~~~~~~~~~~~~~lG------a~~v--~~~~~~~~~i~~~-~g 241 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDD---KGYENLYCLGRRDRPDPTIDIIEELD------ATYV--DSRQTPVEDVPDV-YE 241 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCT---TCCCEEEEEECCCSSCHHHHHHHHTT------CEEE--ETTTSCGGGHHHH-SC
T ss_pred CEEEEECCCHHHHHHHHHHHHHH---cCCcEEEEEeCCcccHHHHHHHHHcC------Cccc--CCCccCHHHHHHh-CC
Confidence 8999999843 5566 6666 54 5666 999999988 788886532 1222 433211000 01 23
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+-... . ...++.+.++|++||.+++.
T Consensus 242 g~Dvvid~~g-----~---~~~~~~~~~~l~~~G~iv~~ 272 (357)
T 2b5w_A 242 QMDFIYEATG-----F---PKHAIQSVQALAPNGVGALL 272 (357)
T ss_dssp CEEEEEECSC-----C---HHHHHHHHHHEEEEEEEEEC
T ss_pred CCCEEEECCC-----C---hHHHHHHHHHHhcCCEEEEE
Confidence 6899875322 1 13567788999999998874
No 377
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=89.85 E-value=2.6 Score=35.80 Aligned_cols=112 Identities=17% Similarity=0.125 Sum_probs=67.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-CHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-SENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
.++++|=.|++.| ++..+++.+...|++|+.++. +...++...+.....+.++.++.+|+.+...-.. + .-+
T Consensus 17 ~~k~~lVTGas~g-IG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 95 (270)
T 3is3_A 17 DGKVALVTGSGRG-IGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG 95 (270)
T ss_dssp TTCEEEESCTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3678888886654 555665555447889998776 4455555444444445678999999985320000 0 013
Q ss_pred cceEEEehhhhhc------cChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDA------INPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
..|+++.+..+.. ++.+++. .+.+.+.+.++++|.+++..
T Consensus 96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~is 152 (270)
T 3is3_A 96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTS 152 (270)
T ss_dssp CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEEC
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEe
Confidence 6799887654322 2333333 34556777788888877653
No 378
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.76 E-value=2.5 Score=36.42 Aligned_cols=111 Identities=19% Similarity=0.211 Sum_probs=66.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHH-HHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSEN-AVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~-~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
.+++||=.|++.| ++..+++.+...|++|+.++.+.. ..+.+.+.....+.++.++.+|+.+...-.. + .-+
T Consensus 46 ~gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 124 (291)
T 3ijr_A 46 KGKNVLITGGDSG-IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLG 124 (291)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4678888887655 555666555447889999998765 3333433333445678899999985310000 0 014
Q ss_pred cceEEEehhhhh-------ccChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLD-------AINPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~-------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
..|+++.+.... .++.+++. .+++.+.+.++.+|.++..
T Consensus 125 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 125 SLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp SCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 689988754322 12333333 3445566677788877764
No 379
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=89.55 E-value=1.6 Score=37.70 Aligned_cols=82 Identities=13% Similarity=-0.015 Sum_probs=53.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-CCCceEEEEecCCCC-CC------CCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-KPDRCHAFVCDVTSE-DW------NPPFAPE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~-~~------~~~~~~~ 179 (352)
+++||=.|++. .++..+++.+...|++|++++.++..++.+.+.+.. .+.++.++.+|+.+. .. ......+
T Consensus 12 ~k~vlITGas~-GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g 90 (311)
T 3o26_A 12 RRCAVVTGGNK-GIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFG 90 (311)
T ss_dssp CCEEEESSCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CcEEEEecCCc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCC
Confidence 66788777664 456666665544788999999998877666555443 335789999999863 10 0000014
Q ss_pred cceEEEehhhh
Q psy11741 180 SLDIVLLIFVL 190 (352)
Q Consensus 180 ~fD~V~~~~~l 190 (352)
.+|+++.+..+
T Consensus 91 ~iD~lv~nAg~ 101 (311)
T 3o26_A 91 KLDILVNNAGV 101 (311)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 68999887654
No 380
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=89.48 E-value=0.54 Score=41.55 Aligned_cols=58 Identities=21% Similarity=0.216 Sum_probs=38.7
Q ss_pred CceEEEEecCCCCCCCCCCCCCcceEEEehhh--h------------hccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 158 DRCHAFVCDVTSEDWNPPFAPESLDIVLLIFV--L------------DAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 158 ~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~--l------------~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
....++++|..+... .+++++||+|++.=- . .++ ......+++++++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~--~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~--~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLE--SFPEESISLVMTSPPFALQRKKEYGNLEQHEYV--DWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGG--GSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHh--hCCCCCeeEEEECCCCCCCcccccCCcCHHHHH--HHHHHHHHHHHHHCcCCcEEEEEE
Confidence 346777888754211 134678999888311 1 111 356788999999999999999864
No 381
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=89.44 E-value=2.1 Score=36.74 Aligned_cols=107 Identities=8% Similarity=0.075 Sum_probs=67.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC------CCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN------PPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~f 181 (352)
++.+|=-|+++| ++..+++.+...|++|+.+|.+++.++.+.+.. +.++..+.+|+.+...- ....-++.
T Consensus 29 gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 104 (273)
T 4fgs_A 29 AKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEAGRI 104 (273)
T ss_dssp TCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 777888887766 555666555448999999999998887765543 35678889998853210 00011578
Q ss_pred eEEEehhhhh------ccChhHHHHH-----------HHHHHHhcCCCEEEEEE
Q psy11741 182 DIVLLIFVLD------AINPNKMQHV-----------INQVYKYLKPGGMVLFR 218 (352)
Q Consensus 182 D~V~~~~~l~------~~~~~~~~~~-----------l~~~~~~LkpgG~l~~~ 218 (352)
|+++.+.... .++++++..+ .+.+...|+.+|.++..
T Consensus 105 DiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IIni 158 (273)
T 4fgs_A 105 DVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLT 158 (273)
T ss_dssp EEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred CEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEE
Confidence 9988755332 2244444433 34455667777776654
No 382
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=89.44 E-value=2.1 Score=36.08 Aligned_cols=107 Identities=15% Similarity=0.213 Sum_probs=66.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC------CCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP------FAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.+|.++..++...+.. +.++.++.+|+.+...-.. ..-+..
T Consensus 8 gk~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 8 GKKAIVIGGTHG-MGLATVRRLVEGGAEVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHSSE
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 678888887655 555665555447889999999998777665543 3468889999875310000 001468
Q ss_pred eEEEehhhhh------ccChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 182 DIVLLIFVLD------AINPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 182 D~V~~~~~l~------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
|+++.+..+. ..+.+++. .+.+.+...++.+|.++..
T Consensus 84 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~i 137 (255)
T 4eso_A 84 DLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFT 137 (255)
T ss_dssp EEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 9988755432 22333333 2345556666778877764
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=89.40 E-value=0.89 Score=39.93 Aligned_cols=90 Identities=16% Similarity=0.159 Sum_probs=59.0
Q ss_pred eEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 110 NILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 110 ~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+||=.|+ |.|..+..+++. .|++|++++.|+.-++.+++.-. ...+-..+.. .......+.+|+|+-.
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~---~Ga~Vi~~~~~~~~~~~~~~lGa----~~vi~~~~~~---~~~~~~~~~~d~v~d~ 218 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHK---LGYQVAAVSGRESTHGYLKSLGA----NRILSRDEFA---ESRPLEKQLWAGAIDT 218 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHH---TTCCEEEEESCGGGHHHHHHHTC----SEEEEGGGSS---CCCSSCCCCEEEEEES
T ss_pred eEEEECCCcHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhcCC----CEEEecCCHH---HHHhhcCCCccEEEEC
Confidence 4998887 557788888886 56799999999998888876421 1111111111 1111224579988753
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
... ..+..+.+.|+|+|.+++.
T Consensus 219 -----~g~----~~~~~~~~~l~~~G~iv~~ 240 (324)
T 3nx4_A 219 -----VGD----KVLAKVLAQMNYGGCVAAC 240 (324)
T ss_dssp -----SCH----HHHHHHHHTEEEEEEEEEC
T ss_pred -----CCc----HHHHHHHHHHhcCCEEEEE
Confidence 221 2678888999999998875
No 384
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=89.16 E-value=0.23 Score=44.18 Aligned_cols=96 Identities=14% Similarity=0.065 Sum_probs=59.3
Q ss_pred CCCCCeEEEEcCC--ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCC
Q psy11741 105 TCSTKNILEIGCG--VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAP 178 (352)
Q Consensus 105 ~~~~~~vLD~GcG--~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~ 178 (352)
..++.+||-+|+| .|..+..+++. .|++|+++|.++.-++.+++.-. .. . .|..+.... . ....
T Consensus 142 ~~~g~~VlV~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~lga----~~-~--~~~~~~~~~~~~~~~~~~ 211 (340)
T 3gms_A 142 LQRNDVLLVNACGSAIGHLFAQLSQI---LNFRLIAVTRNNKHTEELLRLGA----AY-V--IDTSTAPLYETVMELTNG 211 (340)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHH---HTCEEEEEESSSTTHHHHHHHTC----SE-E--EETTTSCHHHHHHHHTTT
T ss_pred cCCCCEEEEeCCccHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhCCC----cE-E--EeCCcccHHHHHHHHhCC
Confidence 3458899999987 56677777776 56799999999988888876421 11 1 122211100 0 0113
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
..+|+|+....- .. +....+.|+|||.+++.-
T Consensus 212 ~g~Dvvid~~g~-----~~----~~~~~~~l~~~G~iv~~G 243 (340)
T 3gms_A 212 IGADAAIDSIGG-----PD----GNELAFSLRPNGHFLTIG 243 (340)
T ss_dssp SCEEEEEESSCH-----HH----HHHHHHTEEEEEEEEECC
T ss_pred CCCcEEEECCCC-----hh----HHHHHHHhcCCCEEEEEe
Confidence 479999864321 11 223347899999988753
No 385
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.11 E-value=1.3 Score=36.72 Aligned_cols=101 Identities=7% Similarity=-0.006 Sum_probs=64.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|+=+|| |..+..+++.+...+. |+++|.++..++.+. ..+.++.+|..+...-....-...|.|++.
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~-------~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~ 78 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKKVLR-------SGANFVHGDPTRVSDLEKANVRGARAVIVD 78 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH-------TTCEEEESCTTCHHHHHHTTCTTCSEEEEC
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh-------cCCeEEEcCCCCHHHHHhcCcchhcEEEEc
Confidence 567888887 6788888888765678 999999998776665 126788898874310000112467888764
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY 223 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 223 (352)
. +.+.....+....+.+.|+..++....+..
T Consensus 79 ~-----~~d~~n~~~~~~a~~~~~~~~iia~~~~~~ 109 (234)
T 2aef_A 79 L-----ESDSETIHCILGIRKIDESVRIIAEAERYE 109 (234)
T ss_dssp C-----SCHHHHHHHHHHHHHHCSSSEEEEECSSGG
T ss_pred C-----CCcHHHHHHHHHHHHHCCCCeEEEEECCHh
Confidence 2 223334445556677788777777554433
No 386
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=89.01 E-value=2 Score=37.15 Aligned_cols=111 Identities=15% Similarity=0.145 Sum_probs=66.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC--HHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS--ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----AP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s--~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~ 178 (352)
.++++|=.|++.| ++..+++.+...|++|+.++.+ ....+...+.....+.++.++.+|+.+...-.. + .-
T Consensus 48 ~~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 126 (294)
T 3r3s_A 48 KDRKALVTGGDSG-IGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL 126 (294)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3678888887654 5566666554478899999886 334444444444445678888999875310000 0 01
Q ss_pred CcceEEEehhhhhc-------cChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 179 ESLDIVLLIFVLDA-------INPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 179 ~~fD~V~~~~~l~~-------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
+..|+++.+..... ++.+++. .+++.+...++.+|.++..
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 46899887654321 2333333 3445566777788887765
No 387
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=88.94 E-value=1.2 Score=37.97 Aligned_cols=109 Identities=17% Similarity=0.200 Sum_probs=66.0
Q ss_pred CCeEEEEcC-CccccHHHHHhhcCCCCeEEEEEeCCHHH-HHHHHhccccCCCceEEEEecCCCCCCCCC-CC-----CC
Q psy11741 108 TKNILEIGC-GVGNSVFPIVEHCKNDNVFVYGCDFSENA-VNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FA-----PE 179 (352)
Q Consensus 108 ~~~vLD~Gc-G~G~~~~~l~~~~~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~-----~~ 179 (352)
++++|=.|+ |+|.++..+++.+...|++|+.+|.++.. ++...+.. +.++.++.+|+.+...-.. +. -+
T Consensus 7 ~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 83 (269)
T 2h7i_A 7 GKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRL---PAKAPLLELDVQNEEHLASLAGRVTEAIG 83 (269)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTS---SSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhc---CCCceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 678898898 47777888777765578899999988753 34333322 3457788999875320000 00 02
Q ss_pred ---cceEEEehhhhhc-----------cChhHHHH-----------HHHHHHHhcCCCEEEEEEe
Q psy11741 180 ---SLDIVLLIFVLDA-----------INPNKMQH-----------VINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ---~fD~V~~~~~l~~-----------~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+++.+..+.. .+.+++.. +.+.+.+.++++|.++...
T Consensus 84 ~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 84 AGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp TTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 7899887654321 23344433 3445556666678777653
No 388
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=88.74 E-value=2.1 Score=37.52 Aligned_cols=92 Identities=14% Similarity=0.166 Sum_probs=56.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCe--EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNV--FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
..+|.=||+|. ++..++..+...|. +|+++|.++..++.+.+.- . +.-...|..+ . .-...|+|+
T Consensus 33 ~~kI~IIG~G~--mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G----~-~~~~~~~~~~----~--~~~~aDvVi 99 (314)
T 3ggo_A 33 MQNVLIVGVGF--MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLG----I-IDEGTTSIAK----V--EDFSPDFVM 99 (314)
T ss_dssp CSEEEEESCSH--HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTT----S-CSEEESCTTG----G--GGGCCSEEE
T ss_pred CCEEEEEeeCH--HHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCC----C-cchhcCCHHH----H--hhccCCEEE
Confidence 36888898764 44444444432566 8999999998888776531 1 1111222211 0 023578888
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
.. +++.....+++++...++||.+++-
T Consensus 100 la-----vp~~~~~~vl~~l~~~l~~~~iv~d 126 (314)
T 3ggo_A 100 LS-----SPVRTFREIAKKLSYILSEDATVTD 126 (314)
T ss_dssp EC-----SCGGGHHHHHHHHHHHSCTTCEEEE
T ss_pred Ee-----CCHHHHHHHHHHHhhccCCCcEEEE
Confidence 64 3445667788999999999876543
No 389
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=88.72 E-value=0.4 Score=43.08 Aligned_cols=93 Identities=17% Similarity=0.176 Sum_probs=59.7
Q ss_pred CCCeEEEEc--CCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC-CCCCCcc
Q psy11741 107 STKNILEIG--CGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP-PFAPESL 181 (352)
Q Consensus 107 ~~~~vLD~G--cG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~-~~~~~~f 181 (352)
++.+||-.| .|.|..+..+++. .|++|+++|.++..++.+++.- .. .. .|..+... .+ ....+.+
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a~~---~Ga~Vi~~~~~~~~~~~~~~~G----a~-~~--~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLSKK---AKCHVIGTCSSDEKSAFLKSLG----CD-RP--INYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTT----CS-EE--EETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHh---CCCEEEEEECCHHHHHHHHHcC----Cc-EE--EecCChhHHHHHHHhcCCCC
Confidence 478999999 4567777777776 5679999999998888887631 11 11 12221100 00 0012468
Q ss_pred eEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 182 DIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|+|+.... . ..++.+.+.|+++|.+++.
T Consensus 233 D~vid~~g-----~----~~~~~~~~~l~~~G~iv~~ 260 (362)
T 2c0c_A 233 DVVYESVG-----G----AMFDLAVDALATKGRLIVI 260 (362)
T ss_dssp EEEEECSC-----T----HHHHHHHHHEEEEEEEEEC
T ss_pred CEEEECCC-----H----HHHHHHHHHHhcCCEEEEE
Confidence 99986432 1 3577788999999988874
No 390
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=88.26 E-value=0.64 Score=40.97 Aligned_cols=90 Identities=13% Similarity=0.139 Sum_probs=55.7
Q ss_pred eEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCC--CCCCCCCCCcceEEE
Q psy11741 110 NILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSE--DWNPPFAPESLDIVL 185 (352)
Q Consensus 110 ~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~--~~~~~~~~~~fD~V~ 185 (352)
+||-.|+ |.|..+..+++. .|++|++++.++.-++.+++.-. . . .+ |..+. ........+.+|+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~---~Ga~vi~~~~~~~~~~~~~~lGa---~-~-~i--~~~~~~~~~~~~~~~~~~d~vi 221 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAK---RGYTVEASTGKAAEHDYLRVLGA---K-E-VL--AREDVMAERIRPLDKQRWAAAV 221 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHH---TTCCEEEEESCTTCHHHHHHTTC---S-E-EE--ECC---------CCSCCEEEEE
T ss_pred eEEEecCCCHHHHHHHHHHHH---CCCEEEEEECCHHHHHHHHHcCC---c-E-EE--ecCCcHHHHHHHhcCCcccEEE
Confidence 7999997 556777777776 56789999999888888765321 1 1 11 11110 000111234699987
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
-...- ..+..+.+.|++||.+++.
T Consensus 222 d~~g~---------~~~~~~~~~l~~~G~~v~~ 245 (328)
T 1xa0_A 222 DPVGG---------RTLATVLSRMRYGGAVAVS 245 (328)
T ss_dssp ECSTT---------TTHHHHHHTEEEEEEEEEC
T ss_pred ECCcH---------HHHHHHHHhhccCCEEEEE
Confidence 64321 1366778899999998874
No 391
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=88.13 E-value=2.9 Score=36.07 Aligned_cols=111 Identities=17% Similarity=0.134 Sum_probs=65.8
Q ss_pred CCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|+++ +.++..+++.+...|++|+.+|.++...+.+.+..... ..+.++.+|+.+...-.. + .-+.
T Consensus 30 ~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 30 GKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL-GVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH-TCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67889888764 34555555555447889999999876555444333222 236788999885320000 0 0146
Q ss_pred ceEEEehhhhh----------ccChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLD----------AINPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~----------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+++.+..+. ..+.+++. .+++.+...++.+|.++...
T Consensus 109 iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~is 168 (296)
T 3k31_A 109 LDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLS 168 (296)
T ss_dssp CSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEE
T ss_pred CCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEE
Confidence 89988865432 22333333 33455666777788877653
No 392
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=88.12 E-value=4.3 Score=34.28 Aligned_cols=110 Identities=16% Similarity=0.128 Sum_probs=65.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCH---HHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSE---NAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----AP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~ 178 (352)
++++|=.|+++| ++..+++.+...|++|+.++.+. ..++...+.....+.++.++.+|+.+...-.. + .-
T Consensus 11 ~k~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 11 NKVIVIAGGIKN-LGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TCEEEEETCSSH-HHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 678888887655 66777777765889999987643 34444444443445678899999985320000 0 01
Q ss_pred CcceEEEehhhhh------ccChhHHHH-----------HHHHHHHhcCCCEEEEEE
Q psy11741 179 ESLDIVLLIFVLD------AINPNKMQH-----------VINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 179 ~~fD~V~~~~~l~------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~ 218 (352)
+..|+++.+..+. ..+.+++.. +++.+...|+++|.++..
T Consensus 90 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~i 146 (262)
T 3ksu_A 90 GKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITI 146 (262)
T ss_dssp CSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEE
Confidence 4689988765432 223333332 334455556677877764
No 393
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=88.11 E-value=0.44 Score=42.18 Aligned_cols=94 Identities=14% Similarity=0.110 Sum_probs=59.7
Q ss_pred CCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCCCc
Q psy11741 107 STKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAPES 180 (352)
Q Consensus 107 ~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~~~ 180 (352)
++.+||-.|+ |.|..+..+++. .|++|+++|.++.-++.+++.- .. . ..|..+.... . ......
T Consensus 148 ~g~~vlV~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~g----a~-~--~~~~~~~~~~~~~~~~~~~~g 217 (334)
T 3qwb_A 148 KGDYVLLFAAAGGVGLILNQLLKM---KGAHTIAVASTDEKLKIAKEYG----AE-Y--LINASKEDILRQVLKFTNGKG 217 (334)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTT----CS-E--EEETTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHcC----Cc-E--EEeCCCchHHHHHHHHhCCCC
Confidence 4889999994 456666667765 6779999999999888887642 11 1 1222211000 0 011346
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+....- ..+..+.+.|+|||.+++.-
T Consensus 218 ~D~vid~~g~---------~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 218 VDASFDSVGK---------DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp EEEEEECCGG---------GGHHHHHHHEEEEEEEEECC
T ss_pred ceEEEECCCh---------HHHHHHHHHhccCCEEEEEc
Confidence 9999864331 24667788999999988753
No 394
>1ej6_A Lambda2; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_U
Probab=87.99 E-value=1.5 Score=44.23 Aligned_cols=144 Identities=17% Similarity=0.170 Sum_probs=86.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+.++||+|.|.-.=.+.|.. +...|+.+|+-|.+ +..........|++.|.....+.. ...+|.|.|.
T Consensus 822 ~~~~lDlGTGPE~RiLsLiP----~~~pvtm~D~RP~a-----e~~~~w~~~T~f~~~DyL~~~~~~---~~~~D~vt~i 889 (1289)
T 1ej6_A 822 GDVVLDLGTGPEAKILELIP----ATSPVTCVDIRPTA-----QPSGCWNVRTTFLELDYLSDGWIT---GVRGDIVTCM 889 (1289)
T ss_dssp TCCEEEESCCSSCGGGGTSC----TTSCEEEEESSCCC-----SCSTTBSSCEEEEESCTTSSSCGG---GCCCSEEEEC
T ss_pred cceEEEccCCCcceeeeecC----CCCceEEecccCch-----hhhccccccceeeEccccccceee---cCCCcEEEEE
Confidence 78999999988765555544 77789999998742 111112355899999998765433 3578999998
Q ss_pred hhhhcc---ChhHHHHHHHHHHHhcCCCE--EEEEEeCCCCchh-hHhhhcCccccCceee-cCCCeeeeccCHHHHHHH
Q psy11741 188 FVLDAI---NPNKMQHVINQVYKYLKPGG--MVLFRDYGRYDLV-QLRFKKGRCLQDNFYA-RGDGTLVYFFTREEVKTM 260 (352)
Q Consensus 188 ~~l~~~---~~~~~~~~l~~~~~~LkpgG--~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l 260 (352)
++|... ..-++...++++.+.+++.| .+++....+-+.. .++-........+-|. .+.+....+.+.+.+.++
T Consensus 890 ~SLGAA~A~a~~tl~~~~~q~l~~~~~~~~~~l~lQlNcpL~s~~~vr~~LeId~~~~~Y~F~~~~R~EPY~~~~~l~~a 969 (1289)
T 1ej6_A 890 LSLGAAAAGKSMTFDAAFQQLIKVLSKSTANVVLVQVNCPTDVVRSIKGYLEIDSTNKRYRFPKFGRDEPYSDMDALEKI 969 (1289)
T ss_dssp SCHHHHHHHHTCCHHHHHHHHHHHHHTSCCSEEEEECCCCSSSCCCBTTTBEEETTTTEEEETTTTEEEECCCHHHHHHH
T ss_pred eechhhhhccCCcHHHHHHHHHHHHHhcCccEEEEEecCCCCCCCCCCCeEEEecccceEEcCCCCcCCCCCCHHHHHHH
Confidence 776543 12356778888888887766 4555433222110 0000000011112222 344555667788888887
Q ss_pred HHh
Q psy11741 261 FES 263 (352)
Q Consensus 261 l~~ 263 (352)
+++
T Consensus 970 i~~ 972 (1289)
T 1ej6_A 970 CRT 972 (1289)
T ss_dssp HHH
T ss_pred HHH
Confidence 766
No 395
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.94 E-value=0.44 Score=42.01 Aligned_cols=94 Identities=12% Similarity=0.037 Sum_probs=58.6
Q ss_pred CCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCCCc
Q psy11741 107 STKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAPES 180 (352)
Q Consensus 107 ~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~~~ 180 (352)
++.+||-.|+ |.|..+..+++. .|++|+++|.++..++.+++.- ... ..|..+.... + ......
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a~~---~G~~V~~~~~~~~~~~~~~~~g----~~~---~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWAKA---LGAKLIGTVGTAQKAQSALKAG----AWQ---VINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHHHT----CSE---EEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHcC----CCE---EEECCCccHHHHHHHHhCCCC
Confidence 4789999994 455566666655 5679999999998888876531 111 1233321100 0 011236
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+.+.. ...++.+.++|++||.+++..
T Consensus 210 ~D~vi~~~g---------~~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 210 VRVVYDSVG---------RDTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp EEEEEECSC---------GGGHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECCc---------hHHHHHHHHHhcCCCEEEEEe
Confidence 999986543 124677788999999988753
No 396
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=87.91 E-value=0.97 Score=38.38 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC------CCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP------FAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~~~f 181 (352)
++.+|=-|.+.| +...+++.+...|++|+.+|.+++.++.+.+.+...+.++.++.+|+.+...-.. ..-+..
T Consensus 7 gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 7 NKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 778888887776 4555555554488999999999998888877776667789999999986321000 011578
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 86 DiLVNNAG 93 (254)
T 4fn4_A 86 DVLCNNAG 93 (254)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 99887553
No 397
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=87.48 E-value=0.54 Score=42.29 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=56.2
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+||=+|+|. |..+..+++. .|++|+++|.++.-++.+++... .. .. .|..+.. .+....+.+|+|+
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~---~Ga~Vi~~~~~~~~~~~~~~~lG---a~-~v--~~~~~~~-~~~~~~~~~D~vi 256 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKA---FGSKVTVISTSPSKKEEALKNFG---AD-SF--LVSRDQE-QMQAAAGTLDGII 256 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---TTCEEEEEESCGGGHHHHHHTSC---CS-EE--EETTCHH-HHHHTTTCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHhcC---Cc-eE--EeccCHH-HHHHhhCCCCEEE
Confidence 478999999753 5555666665 56799999999988877764332 11 11 1222100 0000013699998
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
....... .++...++|+++|.++...
T Consensus 257 d~~g~~~--------~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 257 DTVSAVH--------PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp ECCSSCC--------CSHHHHHHEEEEEEEEECC
T ss_pred ECCCcHH--------HHHHHHHHHhcCCEEEEEc
Confidence 6433211 2345667899999988743
No 398
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=87.41 E-value=0.28 Score=43.77 Aligned_cols=94 Identities=18% Similarity=0.183 Sum_probs=58.5
Q ss_pred CCCeEEEEc-CC-ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-CC-CCCCCcce
Q psy11741 107 STKNILEIG-CG-VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-NP-PFAPESLD 182 (352)
Q Consensus 107 ~~~~vLD~G-cG-~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-~~-~~~~~~fD 182 (352)
++.+||=+| +| .|..+..+++. .|++|+++|.++.-++.+++.-. . .. .|..+... .+ ....+.+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~---~Ga~Vi~~~~~~~~~~~~~~lGa---~--~v--i~~~~~~~~~~~~~~~~g~D 219 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKA---YGLRVITTASRNETIEWTKKMGA---D--IV--LNHKESLLNQFKTQGIELVD 219 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHH---TTCEEEEECCSHHHHHHHHHHTC---S--EE--ECTTSCHHHHHHHHTCCCEE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhcCC---c--EE--EECCccHHHHHHHhCCCCcc
Confidence 378999884 43 46667777775 67799999999998888877421 1 11 12111000 00 01234699
Q ss_pred EEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 183 IVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 183 ~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+|+.... -...+..+.++|+++|.++..
T Consensus 220 vv~d~~g--------~~~~~~~~~~~l~~~G~iv~~ 247 (346)
T 3fbg_A 220 YVFCTFN--------TDMYYDDMIQLVKPRGHIATI 247 (346)
T ss_dssp EEEESSC--------HHHHHHHHHHHEEEEEEEEES
T ss_pred EEEECCC--------chHHHHHHHHHhccCCEEEEE
Confidence 9886321 134567788899999998763
No 399
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=87.16 E-value=2.3 Score=37.85 Aligned_cols=94 Identities=11% Similarity=0.080 Sum_probs=58.5
Q ss_pred CC--CeEEEEcC--CccccHHHHHhhcCCCCe-EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCC
Q psy11741 107 ST--KNILEIGC--GVGNSVFPIVEHCKNDNV-FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAP 178 (352)
Q Consensus 107 ~~--~~vLD~Gc--G~G~~~~~l~~~~~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~ 178 (352)
++ .+||-.|+ |.|..+..+++. .|+ +|+++|.++..++.+++... .. ...|..+.... + ....
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~---~Ga~~Vi~~~~~~~~~~~~~~~~g---~~---~~~d~~~~~~~~~~~~~~~ 228 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHF---LGCSRVVGICGTHEKCILLTSELG---FD---AAINYKKDNVAEQLRESCP 228 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHH---TTCSEEEEEESCHHHHHHHHHTSC---CS---EEEETTTSCHHHHHHHHCT
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHH---CCCCeEEEEeCCHHHHHHHHHHcC---Cc---eEEecCchHHHHHHHHhcC
Confidence 46 89999998 445555555554 677 99999999988887765321 11 12243321100 0 0011
Q ss_pred CcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 179 ESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 179 ~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+.+|+|+.+.. ...+..+.++|++||.+++.
T Consensus 229 ~~~d~vi~~~G---------~~~~~~~~~~l~~~G~iv~~ 259 (357)
T 2zb4_A 229 AGVDVYFDNVG---------GNISDTVISQMNENSHIILC 259 (357)
T ss_dssp TCEEEEEESCC---------HHHHHHHHHTEEEEEEEEEC
T ss_pred CCCCEEEECCC---------HHHHHHHHHHhccCcEEEEE
Confidence 26899886432 14577788999999998874
No 400
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.09 E-value=0.45 Score=42.33 Aligned_cols=96 Identities=13% Similarity=0.070 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCccc-cHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-----CCCCCCC
Q psy11741 106 CSTKNILEIGCGVGN-SVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-----NPPFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~GcG~G~-~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~~ 179 (352)
.++.+||=+|+|++. .+..+++.. .+.+|+++|.++.-++.+++.... . . .|..+... .. ....
T Consensus 162 ~~g~~VlV~GaG~~g~~a~~~a~~~--~g~~Vi~~~~~~~r~~~~~~~Ga~----~-~--i~~~~~~~~~~v~~~-t~g~ 231 (348)
T 4eez_A 162 KPGDWQVIFGAGGLGNLAIQYAKNV--FGAKVIAVDINQDKLNLAKKIGAD----V-T--INSGDVNPVDEIKKI-TGGL 231 (348)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHT--SCCEEEEEESCHHHHHHHHHTTCS----E-E--EEC-CCCHHHHHHHH-TTSS
T ss_pred CCCCEEEEEcCCCccHHHHHHHHHh--CCCEEEEEECcHHHhhhhhhcCCe----E-E--EeCCCCCHHHHhhhh-cCCC
Confidence 348899999998753 445555544 578999999999988888765321 1 1 12211100 00 1123
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|.++.... . ...+....+.|+++|.+++.-
T Consensus 232 g~d~~~~~~~----~----~~~~~~~~~~l~~~G~~v~~g 263 (348)
T 4eez_A 232 GVQSAIVCAV----A----RIAFEQAVASLKPMGKMVAVA 263 (348)
T ss_dssp CEEEEEECCS----C----HHHHHHHHHTEEEEEEEEECC
T ss_pred CceEEEEecc----C----cchhheeheeecCCceEEEEe
Confidence 4666654321 1 245677788999999988753
No 401
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=87.04 E-value=1.3 Score=33.19 Aligned_cols=97 Identities=19% Similarity=0.202 Sum_probs=54.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC-CCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP-PFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~~~~~fD~V~~ 186 (352)
..+|+=+|| |..+..+++.+...+.+|+++|.++..++.+++. ......+|..+.. .+ ...-..+|+|+.
T Consensus 6 ~~~v~I~G~--G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~------~~~~~~~d~~~~~-~l~~~~~~~~d~vi~ 76 (144)
T 2hmt_A 6 NKQFAVIGL--GRFGGSIVKELHRMGHEVLAVDINEEKVNAYASY------ATHAVIANATEEN-ELLSLGIRNFEYVIV 76 (144)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTT------CSEEEECCTTCHH-HHHTTTGGGCSEEEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------CCEEEEeCCCCHH-HHHhcCCCCCCEEEE
Confidence 457998987 6677777666543677899999998765543321 2345666765311 01 011246898886
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.... +.+....+....+.+.+. .++..
T Consensus 77 ~~~~----~~~~~~~~~~~~~~~~~~-~ii~~ 103 (144)
T 2hmt_A 77 AIGA----NIQASTLTTLLLKELDIP-NIWVK 103 (144)
T ss_dssp CCCS----CHHHHHHHHHHHHHTTCS-EEEEE
T ss_pred CCCC----chHHHHHHHHHHHHcCCC-eEEEE
Confidence 4321 112222344445556675 55543
No 402
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=86.86 E-value=0.37 Score=42.55 Aligned_cols=95 Identities=16% Similarity=0.026 Sum_probs=60.1
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~~ 179 (352)
.++.+||-.|+ |.|..+..+++. .|++|+++|.++.-++.+++.-. . . ..|..+.... + .....
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~Ga----~-~--~~~~~~~~~~~~~~~~~~~~ 208 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKA---LGAKLIGTVSSPEKAAHAKALGA----W-E--TIDYSHEDVAKRVLELTDGK 208 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---HTCEEEEEESSHHHHHHHHHHTC----S-E--EEETTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHcCC----C-E--EEeCCCccHHHHHHHHhCCC
Confidence 34889999983 456677777776 56799999999998888876421 1 1 1222211000 0 01134
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+....- ..+..+.+.|++||.+++.-
T Consensus 209 g~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 209 KCPVVYDGVGQ---------DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CEEEEEESSCG---------GGHHHHHTTEEEEEEEEECC
T ss_pred CceEEEECCCh---------HHHHHHHHHhcCCCEEEEEe
Confidence 69999864321 24566788999999988853
No 403
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=86.74 E-value=0.5 Score=42.43 Aligned_cols=91 Identities=15% Similarity=0.215 Sum_probs=55.9
Q ss_pred CCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCH---HHHHHHHhccccCCCceEEEEecCCCCCCCCCC--CCCcc
Q psy11741 108 TKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSE---NAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF--APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~--~~~~f 181 (352)
+.+||-+|+|. |..+..+++. .|++|+++|.++ .-++.+++.- ...+ | .+ ...... ..+.+
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~---~Ga~Vi~~~~~~~~~~~~~~~~~~g------a~~v--~-~~-~~~~~~~~~~~~~ 247 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRT---YGLEVWMANRREPTEVEQTVIEETK------TNYY--N-SS-NGYDKLKDSVGKF 247 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHH---HTCEEEEEESSCCCHHHHHHHHHHT------CEEE--E-CT-TCSHHHHHHHCCE
T ss_pred CCEEEEECCCHHHHHHHHHHHh---CCCEEEEEeCCccchHHHHHHHHhC------Ccee--c-hH-HHHHHHHHhCCCC
Confidence 78999999832 4455555554 566999999998 7777776531 1222 3 22 110000 01469
Q ss_pred eEEEehhhhhccChhHHHHHH-HHHHHhcCCCEEEEEEe
Q psy11741 182 DIVLLIFVLDAINPNKMQHVI-NQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 182 D~V~~~~~l~~~~~~~~~~~l-~~~~~~LkpgG~l~~~~ 219 (352)
|+|+...... ..+ +.+.+.|+++|.+++..
T Consensus 248 d~vid~~g~~--------~~~~~~~~~~l~~~G~iv~~g 278 (366)
T 2cdc_A 248 DVIIDATGAD--------VNILGNVIPLLGRNGVLGLFG 278 (366)
T ss_dssp EEEEECCCCC--------THHHHHHGGGEEEEEEEEECS
T ss_pred CEEEECCCCh--------HHHHHHHHHHHhcCCEEEEEe
Confidence 9998643311 134 77889999999988753
No 404
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=86.73 E-value=9.3 Score=39.01 Aligned_cols=53 Identities=11% Similarity=0.197 Sum_probs=40.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCe--EEEEEeCCHHHHHHHHhccccCCCceEEEEecC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNV--FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDV 167 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~ 167 (352)
...+++|+-||.|.++.-+.. .|. .+.++|+++.+.+.-+.|.. +..++..|+
T Consensus 539 ~~l~~iDLFaG~GGlslGl~~----AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI 593 (1002)
T 3swr_A 539 PKLRTLDVFSGCGGLSEGFHQ----AGISDTLWAIEMWDPAAQAFRLNNP----GSTVFTEDC 593 (1002)
T ss_dssp CCEEEEEESCTTSHHHHHHHH----HTSEEEEEEECSSHHHHHHHHHHCT----TSEEECSCH
T ss_pred CCCeEEEeccCccHHHHHHHH----CCCCceEEEEECCHHHHHHHHHhCC----CCccccccH
Confidence 356899999999999998877 453 57899999999988887753 334555554
No 405
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=86.72 E-value=2.7 Score=37.43 Aligned_cols=95 Identities=11% Similarity=0.071 Sum_probs=58.5
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC--CC--CCCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW--NP--PFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~--~~--~~~~~ 179 (352)
.++.+||-.|+ |.|..+..+++. .|++|+++|.++..++.+++.- .. ...|..+... .+ .....
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~g----~~---~~~~~~~~~~~~~~~~~~~~~ 230 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRM---AGAIPLVTAGSQKKLQMAEKLG----AA---AGFNYKKEDFSEATLKFTKGA 230 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESCHHHHHHHHHHT----CS---EEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCccHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHHcC----Cc---EEEecCChHHHHHHHHHhcCC
Confidence 34789999984 455566666665 6779999999999888885431 11 1123322110 00 01124
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+.+..- . .+....+.|++||.+++..
T Consensus 231 ~~d~vi~~~G~-----~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 231 GVNLILDCIGG-----S----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp CEEEEEESSCG-----G----GHHHHHHHEEEEEEEEECC
T ss_pred CceEEEECCCc-----h----HHHHHHHhccCCCEEEEEe
Confidence 69999865431 1 3566778899999988753
No 406
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=86.72 E-value=0.3 Score=43.51 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=59.7
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCC-CCC-C-CCCCc
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSED-WNP-P-FAPES 180 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~-~~~-~-~~~~~ 180 (352)
.++.+||-.|+ |.|..+..+++. .|++|++++.++.-++.+++.-. . ..+ |..... ... . .....
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~~ga----~-~v~--~~~~~~~~~v~~~~~~~g 227 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKG---MGAKVIAVVNRTAATEFVKSVGA----D-IVL--PLEEGWAKAVREATGGAG 227 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSGGGHHHHHHHTC----S-EEE--ESSTTHHHHHHHHTTTSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhcCC----c-EEe--cCchhHHHHHHHHhCCCC
Confidence 34889999997 456677777776 67799999999988888876421 1 111 211100 000 0 11236
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+....- ..+..+.+.|++||.+++.-
T Consensus 228 ~Dvvid~~g~---------~~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 228 VDMVVDPIGG---------PAFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp EEEEEESCC-----------CHHHHHHTEEEEEEEEEC-
T ss_pred ceEEEECCch---------hHHHHHHHhhcCCCEEEEEE
Confidence 9999864331 14667788999999988753
No 407
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=86.69 E-value=6.5 Score=33.37 Aligned_cols=110 Identities=15% Similarity=0.073 Sum_probs=65.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC-HHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS-ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s-~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|++.| ++..+++.+...|++|+.++.+ ...++...+.....+.++.++.+|+.+...-.. + .-+.
T Consensus 31 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 31 GKTAFVTGGSRG-IGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 678888887665 4555555554478899988654 344444444444445678899999985320000 0 0136
Q ss_pred ceEEEehhhhh------ccChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLD------AINPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~------~~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
.|+++.+..+. ..+.+++. .+++.+.+.++++|.++..
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 89988865432 22333333 3455667778888877765
No 408
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=86.58 E-value=2.6 Score=35.90 Aligned_cols=111 Identities=16% Similarity=0.197 Sum_probs=63.1
Q ss_pred CCeEEEEcCC-ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCG-VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG-~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
+++||=.|++ +|.++..+++.+...|++|+.++.++..-+.+.+..... ..+.++.+|+.+...-.. + .-+.
T Consensus 6 ~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 6 GKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQEL-NSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-CCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 6788888886 366777777777557899999998875111111111111 236788899875310000 0 0146
Q ss_pred ceEEEehhhhh----------ccChhHHHH-----------HHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLD----------AINPNKMQH-----------VINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~----------~~~~~~~~~-----------~l~~~~~~LkpgG~l~~~~ 219 (352)
.|+++.+..+. ..+.+++.. +++.+.+.++++|.++...
T Consensus 85 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 144 (275)
T 2pd4_A 85 LDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLS 144 (275)
T ss_dssp EEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred CCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEe
Confidence 89988865432 223333332 3344555565577777643
No 409
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=86.46 E-value=4.1 Score=34.41 Aligned_cols=82 Identities=20% Similarity=0.085 Sum_probs=50.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc--CCCceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY--KPDRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
+++||=.|++. .++..+++.+...|++|++++.++..++.+.+.... .+.++.++.+|+.+...-.. + .-+
T Consensus 7 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 7 GKVALVTGAAQ-GIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCC-cHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 56788888654 455666655544788999999998766554433322 12457888999875310000 0 013
Q ss_pred cceEEEehhhh
Q psy11741 180 SLDIVLLIFVL 190 (352)
Q Consensus 180 ~fD~V~~~~~l 190 (352)
..|+++.+...
T Consensus 86 ~id~lv~~Ag~ 96 (267)
T 2gdz_A 86 RLDILVNNAGV 96 (267)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57998876643
No 410
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=86.41 E-value=0.65 Score=40.98 Aligned_cols=92 Identities=15% Similarity=0.118 Sum_probs=56.4
Q ss_pred eEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 110 NILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 110 ~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+||-.|+ |.|..+..+++. .|++|++++.++.-++.+++.-. . ..+-..+.... .......+.+|+|+-.
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~---~Ga~vi~~~~~~~~~~~~~~lGa---~-~v~~~~~~~~~-~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNK---RGYDVVASTGNREAADYLKQLGA---S-EVISREDVYDG-TLKALSKQQWQGAVDP 224 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHH---HTCCEEEEESSSSTHHHHHHHTC---S-EEEEHHHHCSS-CCCSSCCCCEEEEEES
T ss_pred eEEEECCCCHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHcCC---c-EEEECCCchHH-HHHHhhcCCccEEEEC
Confidence 7999997 456677777776 45689999999887787765321 1 11111111000 0011223469998754
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.. . ..+....+.|++||.+++.
T Consensus 225 ~g-----~----~~~~~~~~~l~~~G~iv~~ 246 (330)
T 1tt7_A 225 VG-----G----KQLASLLSKIQYGGSVAVS 246 (330)
T ss_dssp CC-----T----HHHHHHHTTEEEEEEEEEC
T ss_pred Cc-----H----HHHHHHHHhhcCCCEEEEE
Confidence 22 1 2467788899999998875
No 411
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=86.23 E-value=1 Score=39.68 Aligned_cols=94 Identities=16% Similarity=0.222 Sum_probs=58.9
Q ss_pred CCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CCCCCc
Q psy11741 107 STKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PFAPES 180 (352)
Q Consensus 107 ~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~~~~~ 180 (352)
++.+||-.|+ |.|..+..+++. .|++|+++|.++..++.+++.- ... ..|..+.... + ......
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a~~---~G~~Vi~~~~~~~~~~~~~~~g----~~~---~~d~~~~~~~~~i~~~~~~~~ 214 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWARH---LGATVIGTVSTEEKAETARKLG----CHH---TINYSTQDFAEVVREITGGKG 214 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHT----CSE---EEETTTSCHHHHHHHHHTTCC
T ss_pred CCCEEEEECCccHHHHHHHHHHHH---CCCEEEEEeCCHHHHHHHHHcC----CCE---EEECCCHHHHHHHHHHhCCCC
Confidence 4789999995 556666666665 6679999999998888876531 111 1233321100 0 001236
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+.+..- ..++.+.+.|++||.+++..
T Consensus 215 ~d~vi~~~g~---------~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 215 VDVVYDSIGK---------DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp EEEEEECSCT---------TTHHHHHHTEEEEEEEEECC
T ss_pred CeEEEECCcH---------HHHHHHHHhhccCCEEEEEe
Confidence 8999864321 34677788999999987753
No 412
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=86.19 E-value=1.5 Score=35.70 Aligned_cols=98 Identities=14% Similarity=0.117 Sum_probs=56.9
Q ss_pred eEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEehhh
Q psy11741 110 NILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFV 189 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~ 189 (352)
+||=.|+ +|.++..+++.+...+.+|++++-++..+.... .++.++.+|+.+... . .-..+|+|+....
T Consensus 2 kvlVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~-~--~~~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGIIGA-TGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH-------KDINILQKDIFDLTL-S--DLSDQNVVVDAYG 70 (221)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCH-H--HHTTCSEEEECCC
T ss_pred eEEEEcC-CchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc-------CCCeEEeccccChhh-h--hhcCCCEEEECCc
Confidence 5666654 566666666665447889999999886554332 457899999986432 1 1245899887654
Q ss_pred hhccChhHHHHHHHHHHHhcCC--CEEEEEE
Q psy11741 190 LDAINPNKMQHVINQVYKYLKP--GGMVLFR 218 (352)
Q Consensus 190 l~~~~~~~~~~~l~~~~~~Lkp--gG~l~~~ 218 (352)
...-...........+.+.++. .+.+++.
T Consensus 71 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~ 101 (221)
T 3ew7_A 71 ISPDEAEKHVTSLDHLISVLNGTVSPRLLVV 101 (221)
T ss_dssp SSTTTTTSHHHHHHHHHHHHCSCCSSEEEEE
T ss_pred CCccccchHHHHHHHHHHHHHhcCCceEEEE
Confidence 4221112223334445555543 3455543
No 413
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=86.12 E-value=0.37 Score=43.08 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=59.7
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCCCc
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAPES 180 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~~~ 180 (352)
.++.+||-.|+ |.|..+..+++. .|++|+++|.++..++.+++.-. . . ..|..+.... + ....+.
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~---~Ga~Vi~~~~~~~~~~~~~~lGa----~-~--~~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARA---FGAEVYATAGSTGKCEACERLGA----K-R--GINYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHTC----S-E--EEETTTSCHHHHHHHHHSSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhcCC----C-E--EEeCCchHHHHHHHHHhCCC
Confidence 35789999853 456677777775 67799999999999888876421 1 1 1232221100 0 000346
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
+|+|+....- + .+....+.|+++|.+++..
T Consensus 236 ~Dvvid~~g~-----~----~~~~~~~~l~~~G~iv~~g 265 (353)
T 4dup_A 236 VDIILDMIGA-----A----YFERNIASLAKDGCLSIIA 265 (353)
T ss_dssp EEEEEESCCG-----G----GHHHHHHTEEEEEEEEECC
T ss_pred ceEEEECCCH-----H----HHHHHHHHhccCCEEEEEE
Confidence 9999864331 1 4566788999999988753
No 414
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=85.96 E-value=0.59 Score=39.90 Aligned_cols=97 Identities=11% Similarity=0.071 Sum_probs=51.8
Q ss_pred cCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc--CCCceEEE-EecCCCCCCCCCCCCCcceEEEehhh--
Q psy11741 115 GCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY--KPDRCHAF-VCDVTSEDWNPPFAPESLDIVLLIFV-- 189 (352)
Q Consensus 115 GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~--~~~~v~~~-~~d~~~~~~~~~~~~~~fD~V~~~~~-- 189 (352)
.++.|.....+.+. +|..|..||..- ..-.++... .-+...+. .+|+..+. ..+++|+|++...
T Consensus 149 ~~~~~~~~~~~~k~---~g~~vl~v~~~~---~~p~k~v~wi~Pi~GAt~~~~lDfg~p~-----~~~k~DvV~SDMApn 217 (320)
T 2hwk_A 149 EHPQSDFSSFVSKL---KGRTVLVVGEKL---SVPGKMVDWLSDRPEATFRARLDLGIPG-----DVPKYDIIFVNVRTP 217 (320)
T ss_dssp CCCCCCCHHHHHTS---SCSEEEEEESCC---CCTTSEEEEEESSTTCSEECCGGGCSCT-----TSCCEEEEEEECCCC
T ss_pred ccCCCCHHHHHhhC---CCcEEEEEeccc---ccCCceeEeeccCCCceeecccccCCcc-----ccCcCCEEEEcCCCC
Confidence 35556665555443 677777765211 111111111 01223444 56665422 2367999999432
Q ss_pred --hhccC----h-hHHHHHHHHHHHhcCCCEEEEEEeCCC
Q psy11741 190 --LDAIN----P-NKMQHVINQVYKYLKPGGMVLFRDYGR 222 (352)
Q Consensus 190 --l~~~~----~-~~~~~~l~~~~~~LkpgG~l~~~~~~~ 222 (352)
-||.. . .-+..++..+..+|+|||.+++-.++.
T Consensus 218 ~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygg 257 (320)
T 2hwk_A 218 YKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGY 257 (320)
T ss_dssp CCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCC
T ss_pred CCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 23310 0 122235677789999999999987654
No 415
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=85.95 E-value=0.48 Score=42.44 Aligned_cols=94 Identities=16% Similarity=0.067 Sum_probs=55.8
Q ss_pred CCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEE
Q psy11741 107 STKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 107 ~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
++.+||-+|+|. |..+..+++. .|++|+++|.++.-++.+++.+.. .. .+ |..+.. ......+.+|+|+
T Consensus 180 ~g~~VlV~GaG~vG~~a~qlak~---~Ga~Vi~~~~~~~~~~~~~~~lGa--~~--vi--~~~~~~-~~~~~~~g~D~vi 249 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIAKA---MGHHVTVISSSNKKREEALQDLGA--DD--YV--IGSDQA-KMSELADSLDYVI 249 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH---HTCEEEEEESSTTHHHHHHTTSCC--SC--EE--ETTCHH-HHHHSTTTEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHH---CCCeEEEEeCChHHHHHHHHHcCC--ce--ee--ccccHH-HHHHhcCCCCEEE
Confidence 478999999753 5566666665 456899999999888877733321 11 11 111100 0000013689998
Q ss_pred ehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 186 LIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 186 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
-...-. ..+....++|+|||.++..
T Consensus 250 d~~g~~--------~~~~~~~~~l~~~G~iv~~ 274 (357)
T 2cf5_A 250 DTVPVH--------HALEPYLSLLKLDGKLILM 274 (357)
T ss_dssp ECCCSC--------CCSHHHHTTEEEEEEEEEC
T ss_pred ECCCCh--------HHHHHHHHHhccCCEEEEe
Confidence 643211 1244566789999998875
No 416
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=85.61 E-value=0.43 Score=44.47 Aligned_cols=72 Identities=13% Similarity=0.114 Sum_probs=51.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
.++|+=+|| |..+..+++.+...+..|+.+|.++..++.+...+ .+..+.+|.++...-....-...|++++
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-----~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-----DLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-----SCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-----CcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 467777666 56888888888667899999999999998876653 3678899988532100111256888876
No 417
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=85.60 E-value=1.5 Score=38.69 Aligned_cols=101 Identities=6% Similarity=-0.038 Sum_probs=65.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|+=+|+ |..+..+++.+...+. ++++|.+++.++ ++. ..+.++.+|..+...-....-...|.|++.
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~------~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~ 184 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEV-FVLAEDENVRKK-VLR------SGANFVHGDPTRVSDLEKANVRGARAVIVD 184 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH------TTCEEEESCTTSHHHHHHTCSTTEEEEEEC
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh------CCcEEEEeCCCCHHHHHhcChhhccEEEEc
Confidence 357887776 6788888888765778 999999999887 553 236789999875321001123568888764
Q ss_pred hhhhccChhHHHHHHHHHHHhcCCCEEEEEEeCCCC
Q psy11741 188 FVLDAINPNKMQHVINQVYKYLKPGGMVLFRDYGRY 223 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 223 (352)
. +.+..........+.+.|...++.......
T Consensus 185 ~-----~~d~~n~~~~~~ar~~~~~~~iiar~~~~~ 215 (336)
T 1lnq_A 185 L-----ESDSETIHCILGIRKIDESVRIIAEAERYE 215 (336)
T ss_dssp C-----SSHHHHHHHHHHHHTTCTTSEEEEECSSGG
T ss_pred C-----CccHHHHHHHHHHHHHCCCCeEEEEECCHH
Confidence 2 223333444556677788877777654433
No 418
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=85.38 E-value=1.6 Score=36.59 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=55.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC------CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF------APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~------~~~~f 181 (352)
+++||=.|++.| ++..+++.+...|++|+.+|.++..++...+.....+.++.++.+|+.+...-... .-+..
T Consensus 9 ~k~vlITGas~g-iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T 3qiv_A 9 NKVGIVTGSGGG-IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI 87 (253)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCh-HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 678888887654 55666665544788999999999888777666555556788999999853200000 01368
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 88 d~li~~Ag~ 96 (253)
T 3qiv_A 88 DYLVNNAAI 96 (253)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCc
Confidence 998886543
No 419
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.31 E-value=1.1 Score=39.76 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=58.1
Q ss_pred CCCCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC-----CCCCCCC
Q psy11741 106 CSTKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW-----NPPFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~~~~ 179 (352)
.++.+||=.|+|. |..+..+++.. ....++++|.++.-++.+++.-.. .. .|..+... .+ -...
T Consensus 159 ~~g~~VlV~GaG~vG~~aiq~ak~~--G~~~vi~~~~~~~k~~~a~~lGa~-----~~--i~~~~~~~~~~~~~~-~~~~ 228 (346)
T 4a2c_A 159 CENKNVIIIGAGTIGLLAIQCAVAL--GAKSVTAIDISSEKLALAKSFGAM-----QT--FNSSEMSAPQMQSVL-RELR 228 (346)
T ss_dssp CTTSEEEEECCSHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTTCS-----EE--EETTTSCHHHHHHHH-GGGC
T ss_pred CCCCEEEEECCCCcchHHHHHHHHc--CCcEEEEEechHHHHHHHHHcCCe-----EE--EeCCCCCHHHHHHhh-cccC
Confidence 3488999999875 34556666653 334678999999999988775211 11 12221100 00 0124
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.+|+|+.... -...++...++|++||.+++.-
T Consensus 229 g~d~v~d~~G--------~~~~~~~~~~~l~~~G~~v~~g 260 (346)
T 4a2c_A 229 FNQLILETAG--------VPQTVELAVEIAGPHAQLALVG 260 (346)
T ss_dssp SSEEEEECSC--------SHHHHHHHHHHCCTTCEEEECC
T ss_pred Cccccccccc--------ccchhhhhhheecCCeEEEEEe
Confidence 5787765321 1245667788999999988754
No 420
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=84.67 E-value=1.1 Score=37.82 Aligned_cols=81 Identities=16% Similarity=0.090 Sum_probs=55.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC------CCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN------PPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~f 181 (352)
++++|=.|+++| ++..+++.+...|++|+++|.++..++.+.+.+...+.++.++.+|+.+...- .... +..
T Consensus 7 ~k~vlVTGas~G-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~-g~i 84 (252)
T 3h7a_A 7 NATVAVIGAGDY-IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH-APL 84 (252)
T ss_dssp SCEEEEECCSSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH-SCE
T ss_pred CCEEEEECCCch-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh-CCc
Confidence 677888887765 55566555544788999999998877776666555566789999999853210 0001 478
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 85 d~lv~nAg~ 93 (252)
T 3h7a_A 85 EVTIFNVGA 93 (252)
T ss_dssp EEEEECCCC
T ss_pred eEEEECCCc
Confidence 998876543
No 421
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=84.58 E-value=2.2 Score=36.06 Aligned_cols=80 Identities=13% Similarity=0.081 Sum_probs=54.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC------CCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP------FAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~------~~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.+|.++..++.+.+.....+.++.++.+|+.+...-.. ..-+..
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 89 (264)
T 3ucx_A 11 DKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGRV 89 (264)
T ss_dssp TCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSCC
T ss_pred CcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 678888887665 4555555554378899999999988877766655556778999999986320000 001468
Q ss_pred eEEEehh
Q psy11741 182 DIVLLIF 188 (352)
Q Consensus 182 D~V~~~~ 188 (352)
|+++.+.
T Consensus 90 d~lv~nA 96 (264)
T 3ucx_A 90 DVVINNA 96 (264)
T ss_dssp SEEEECC
T ss_pred cEEEECC
Confidence 9988765
No 422
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=84.22 E-value=4.6 Score=33.84 Aligned_cols=78 Identities=14% Similarity=-0.057 Sum_probs=49.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++. .++..+++.+...|++|+.++.++..++...+.. +.++.++.+|+.+...-.. + .-+..
T Consensus 5 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 5 GKTVIITGGAR-GLGAEAARQAVAAGARVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp CSEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 67788888654 4556666555447889999999987666554433 2457888899875310000 0 01368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 81 D~lv~nAg 88 (254)
T 1hdc_A 81 DGLVNNAG 88 (254)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 423
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=84.09 E-value=2.8 Score=35.47 Aligned_cols=79 Identities=13% Similarity=0.045 Sum_probs=47.4
Q ss_pred CCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCH---HHHHHHHhccccCCCceEEEEecCCCCCCC------CCCC
Q psy11741 108 TKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSE---NAVNILKEHEEYKPDRCHAFVCDVTSEDWN------PPFA 177 (352)
Q Consensus 108 ~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~---~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~~ 177 (352)
+++||=.|+++ |.++..+++.+...|++|+.++.++ ..++..... . ....++.+|+.+...- ....
T Consensus 9 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (265)
T 1qsg_A 9 GKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQ---L-GSDIVLQCDVAEDASIDTMFAELGKV 84 (265)
T ss_dssp TCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHH---T-TCCCEEECCTTCHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHh---c-CCcEEEEccCCCHHHHHHHHHHHHHH
Confidence 66788888752 6677777776644788999999876 222222221 1 2246788898753200 0001
Q ss_pred CCcceEEEehhhh
Q psy11741 178 PESLDIVLLIFVL 190 (352)
Q Consensus 178 ~~~fD~V~~~~~l 190 (352)
-+..|+++.+..+
T Consensus 85 ~g~iD~lv~~Ag~ 97 (265)
T 1qsg_A 85 WPKFDGFVHSIGF 97 (265)
T ss_dssp CSSEEEEEECCCC
T ss_pred cCCCCEEEECCCC
Confidence 2468998886643
No 424
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=84.01 E-value=1.9 Score=36.41 Aligned_cols=81 Identities=14% Similarity=0.031 Sum_probs=54.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++. .++..+++.+...|++|+.+|.++..++.+.+.....+.++.++.+|+.+...-.. + .-+..
T Consensus 6 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 6 EKVVIITGGSS-GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TCEEEETTTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 66788777655 45566666554478899999999988887776665555678999999985320000 0 01468
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 85 d~lv~nAg 92 (257)
T 3imf_A 85 DILINNAA 92 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 425
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=83.91 E-value=4 Score=37.21 Aligned_cols=79 Identities=19% Similarity=0.132 Sum_probs=49.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHH---HHHHHHhccc---------cCCCceEEEEecCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSEN---AVNILKEHEE---------YKPDRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~---~l~~a~~~~~---------~~~~~v~~~~~d~~~~~~~~~ 175 (352)
+++||=.|+ +|.++..+++.+...+.+|++++-++. .++...+.+. ....++.++.+|+.+.. .+.
T Consensus 69 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~-~l~ 146 (427)
T 4f6c_A 69 LGNTLLTGA-TGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMD-DVV 146 (427)
T ss_dssp CEEEEEECT-TSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---C-CCC
T ss_pred CCEEEEecC-CcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcc-cCC
Confidence 557787764 677888888777657889999988776 3333222211 11256899999998632 222
Q ss_pred CCCCcceEEEehhh
Q psy11741 176 FAPESLDIVLLIFV 189 (352)
Q Consensus 176 ~~~~~fD~V~~~~~ 189 (352)
....+|+|+....
T Consensus 147 -~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 147 -LPENMDTIIHAGA 159 (427)
T ss_dssp -CSSCCSEEEECCC
T ss_pred -CcCCCCEEEECCc
Confidence 3467899987654
No 426
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=83.89 E-value=3.2 Score=35.24 Aligned_cols=111 Identities=14% Similarity=0.093 Sum_probs=64.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEE-eCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGC-DFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gv-D~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|+++| ++..+++.+...|++|+.+ ..++...+...+.....+.++.++.+|+.+...-.. + .-+.
T Consensus 27 ~k~~lVTGas~G-IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 27 NKVAIVTGASRG-IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 677888887665 4555555543367888877 445555555544444445678899999985320000 0 0146
Q ss_pred ceEEEehhhhhc------cChhHHH-----------HHHHHHHHhcCCCEEEEEEe
Q psy11741 181 LDIVLLIFVLDA------INPNKMQ-----------HVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 181 fD~V~~~~~l~~------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~~ 219 (352)
.|+++.+..+.. .+.+++. .+++.+.+.++++|.++...
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~is 161 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMS 161 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 899888654322 2233333 34556667777788877653
No 427
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=83.81 E-value=2 Score=36.55 Aligned_cols=82 Identities=11% Similarity=0.005 Sum_probs=53.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++ |.++..+++.+...|.+|+++|.++..++...+.....+.++.++.+|+.+...-.. + .-+.+
T Consensus 31 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 31 GEIVLITGAG-HGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 6788888765 456667766664478899999999877766555444444578899999875310000 0 01368
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+|+.+...
T Consensus 110 D~li~~Ag~ 118 (272)
T 1yb1_A 110 SILVNNAGV 118 (272)
T ss_dssp SEEEECCCC
T ss_pred cEEEECCCc
Confidence 998876543
No 428
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=83.73 E-value=2 Score=35.84 Aligned_cols=81 Identities=19% Similarity=0.093 Sum_probs=52.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CC-----CCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FA-----PESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~-----~~~f 181 (352)
+++||=.| |+|.++..+++.+...|.+|+++|.++..++...+.....+.++.++.+|+.+...-.. +. .+.+
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 56777666 45667777777765578899999999877665544443334568888999875310000 00 1368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+|+.+..
T Consensus 90 d~vi~~Ag 97 (255)
T 1fmc_A 90 DILVNNAG 97 (255)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 98887554
No 429
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=83.63 E-value=2.5 Score=34.92 Aligned_cols=73 Identities=19% Similarity=0.145 Sum_probs=49.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCce-EEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRC-HAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v-~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+++||=.|+ +|.++..+++.+...|.+|++++-++..++.... .++ .++.+|+. . .+...-+.+|+|+.
T Consensus 21 ~~~ilVtGa-tG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~------~~~~~~~~~Dl~-~--~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 21 GMRVLVVGA-NGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE------RGASDIVVANLE-E--DFSHAFASIDAVVF 90 (236)
T ss_dssp CCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH------TTCSEEEECCTT-S--CCGGGGTTCSEEEE
T ss_pred CCeEEEECC-CChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh------CCCceEEEcccH-H--HHHHHHcCCCEEEE
Confidence 778888775 5566666666654478899999998876554432 247 88999987 2 22211246899987
Q ss_pred hhhh
Q psy11741 187 IFVL 190 (352)
Q Consensus 187 ~~~l 190 (352)
....
T Consensus 91 ~ag~ 94 (236)
T 3e8x_A 91 AAGS 94 (236)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 6543
No 430
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=83.63 E-value=1.6 Score=36.99 Aligned_cols=82 Identities=10% Similarity=0.005 Sum_probs=55.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++. .++..+++.+...|++|++++.++..++...+.....+.++.++.+|+.+...-.. + ..+..
T Consensus 29 ~k~vlITGas~-gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 107 (262)
T 3rkr_A 29 GQVAVVTGASR-GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRC 107 (262)
T ss_dssp TCEEEESSTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 67788777654 46666666554478899999999988877766655555678899999975320000 0 01468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 108 d~lv~~Ag~ 116 (262)
T 3rkr_A 108 DVLVNNAGV 116 (262)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 998876544
No 431
>3iyl_W VP1; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_A
Probab=83.50 E-value=2.2 Score=43.47 Aligned_cols=151 Identities=12% Similarity=0.070 Sum_probs=90.7
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCc-eEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDR-CHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~-v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+..+||+|.|.-.=.+.+.. +..-|+.+|.-|.+- ........ ..|++.|.....+.. ...+|.+.|
T Consensus 828 ~~~~lDLGTGPEcRiLsliP----~~~pvtmvD~RP~ae-----~~~~w~~~~T~yi~~DYl~~~~~~---~~~~d~vta 895 (1299)
T 3iyl_W 828 LAHLLDLGTGPECRILSLIP----PTLQVTMSDSRPCAE-----LMASFDPALTAYVQGDYSTAAFWN---GIRCDSATA 895 (1299)
T ss_dssp GCSEEEETCCSSCSGGGSSC----TTSCEEEEESSCCSS-----CGGGBCTTTEEEEESCSSSGGGGS---SCCCSEEEE
T ss_pred CCEEEEcCCCccceeeecCC----CCCceEEEecCCccc-----cccccccccceeEEeccccceeEe---cCCCCEEEE
Confidence 57899999988655444444 777899999977421 11112345 789999998654322 467899999
Q ss_pred hhhhhcc---ChhHHHHHHHHHHHhcCCCE--EEEEEeCCCCchhh-HhhhcCccccC-ceeecCCCeeeeccCHHHHHH
Q psy11741 187 IFVLDAI---NPNKMQHVINQVYKYLKPGG--MVLFRDYGRYDLVQ-LRFKKGRCLQD-NFYARGDGTLVYFFTREEVKT 259 (352)
Q Consensus 187 ~~~l~~~---~~~~~~~~l~~~~~~LkpgG--~l~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 259 (352)
.++|... ..-++...++++.+.+++.| .+++....+-.... .+-........ .+.....+....+.+.+++.+
T Consensus 896 ilSLGAA~a~a~~tl~~~l~~~l~~~~~~~v~~l~lQLN~Pl~~~~~~r~~LeId~~~~~Y~F~~~gR~EPY~~~~~~~~ 975 (1299)
T 3iyl_W 896 IFTIGAAAAAAGTDLIAFVQQLIPRIVAAGGTRMWLQLNTPLYEVSSLPDLIEIDLRDHVYRFNGGERVEPYADPVPLQQ 975 (1299)
T ss_dssp TTTHHHHHHHTTCCHHHHHHHHHHHHHHTTCSEEEECCCCCSSCSCCBTTTEEEETTTTEEEETTTTBCCBCCCHHHHHH
T ss_pred eeechhhhhhCCCcHHHHHHHHHHHHHhcCceEEEEEecCCCCCCCCCCceEEEecccceEEcCCCCcCCCCCCHHHHHH
Confidence 8776543 22467788888888888766 46654322211100 00000001111 222334455666788999988
Q ss_pred HHHhCCCceEEe
Q psy11741 260 MFESAGFVEKQN 271 (352)
Q Consensus 260 ll~~~Gf~~~~~ 271 (352)
++++. |.....
T Consensus 976 ~i~~~-~P~a~~ 986 (1299)
T 3iyl_W 976 AIAAL-LPAAAL 986 (1299)
T ss_dssp HHHHH-SSSSEE
T ss_pred HHHHh-CCCceE
Confidence 88775 544433
No 432
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=83.39 E-value=6.9 Score=33.15 Aligned_cols=61 Identities=25% Similarity=0.234 Sum_probs=43.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTS 169 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~ 169 (352)
++++|=.|++. .++..+++.+...|++|++++.++..++.+.+.....+.++.++.+|+.+
T Consensus 21 ~k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~ 81 (273)
T 1ae1_A 21 GTTALVTGGSK-GIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLS 81 (273)
T ss_dssp TCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCEEEEECCcc-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCC
Confidence 67788888654 45666666554478899999999877766544443334568888899875
No 433
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=83.29 E-value=1.8 Score=36.13 Aligned_cols=82 Identities=13% Similarity=0.120 Sum_probs=54.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCC------CCCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDW------NPPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~------~~~~~~~~f 181 (352)
++++|=.|++ |.++..+++.+...|.+|++++.++..++...+.....+.++.++.+|+.+... ......+..
T Consensus 5 ~k~vlITGas-~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 5 EKVALVTGAS-RGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 5677877765 445666666554478899999999988877766655556678999999985320 000012468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 84 d~li~~Ag~ 92 (247)
T 3lyl_A 84 DILVNNAGI 92 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876543
No 434
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=83.26 E-value=2.2 Score=35.79 Aligned_cols=81 Identities=16% Similarity=0.098 Sum_probs=52.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-CC-----CCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-FA-----PESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~~-----~~~f 181 (352)
+++||=.|++ |.++..+++.+...|.+|+++|.++..++...+.....+.++.++.+|+.+...-.. +. .+.+
T Consensus 13 ~k~vlItGas-ggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 13 NRVAIVTGGA-QNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 6778877765 556666666654478899999999876665544443334568899999875320000 00 1368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+|+.+..
T Consensus 92 d~vi~~Ag 99 (260)
T 3awd_A 92 DILVACAG 99 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 435
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=83.06 E-value=3.4 Score=38.18 Aligned_cols=95 Identities=16% Similarity=0.120 Sum_probs=60.3
Q ss_pred CCCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC---------
Q psy11741 105 TCSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--------- 173 (352)
Q Consensus 105 ~~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--------- 173 (352)
..++.+||=+|+ |.|..+..+++. .|+++++++.++.-++.+++.-. . .. .|..+....
T Consensus 226 ~~~g~~VlV~GasG~vG~~avqlak~---~Ga~vi~~~~~~~~~~~~~~lGa----~-~v--i~~~~~d~~~~~~~~~~~ 295 (456)
T 3krt_A 226 MKQGDNVLIWGASGGLGSYATQFALA---GGANPICVVSSPQKAEICRAMGA----E-AI--IDRNAEGYRFWKDENTQD 295 (456)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHHTC----C-EE--EETTTTTCCSEEETTEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH---cCCeEEEEECCHHHHHHHHhhCC----c-EE--EecCcCcccccccccccc
Confidence 345889999997 446677777776 67799999999998888876421 0 11 122111000
Q ss_pred ----------C-C-CCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 174 ----------P-P-FAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 174 ----------~-~-~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
+ . .....+|+|+-... . ..+....++|++||.+++.
T Consensus 296 ~~~~~~~~~~i~~~t~g~g~Dvvid~~G-------~--~~~~~~~~~l~~~G~iv~~ 343 (456)
T 3krt_A 296 PKEWKRFGKRIRELTGGEDIDIVFEHPG-------R--ETFGASVFVTRKGGTITTC 343 (456)
T ss_dssp HHHHHHHHHHHHHHHTSCCEEEEEECSC-------H--HHHHHHHHHEEEEEEEEES
T ss_pred hHHHHHHHHHHHHHhCCCCCcEEEEcCC-------c--hhHHHHHHHhhCCcEEEEE
Confidence 0 0 01247998875321 1 3567778899999998874
No 436
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=83.06 E-value=2.2 Score=37.00 Aligned_cols=82 Identities=15% Similarity=0.093 Sum_probs=55.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC------CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF------APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~------~~~~f 181 (352)
+++||=.|+++| ++..+++.+...|++|++++.++..++.+.+.+...+.++.++.+|+.+...-... ..+..
T Consensus 31 gk~vlVTGas~g-IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 109 (301)
T 3tjr_A 31 GRAAVVTGGASG-IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGV 109 (301)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCC
Confidence 678888888755 55555555544788999999999888877666555556789999999853200000 01368
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 110 d~lvnnAg~ 118 (301)
T 3tjr_A 110 DVVFSNAGI 118 (301)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 998886543
No 437
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=82.96 E-value=6.4 Score=33.55 Aligned_cols=81 Identities=15% Similarity=0.070 Sum_probs=47.9
Q ss_pred CCeEEEEcCCc-cccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGV-GNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~-G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
+++||=.|+++ |.++..+++.+...|++|++++.++..-+.+.+..... .++.++.+|+.+...-.. + .-+.
T Consensus 21 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (285)
T 2p91_A 21 GKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGF-GSDLVVKCDVSLDEDIKNLKKFLEENWGS 99 (285)
T ss_dssp TCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT-TCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-CCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 67888888763 66777777666447889999998875212222111111 236788899875310000 0 0146
Q ss_pred ceEEEehhh
Q psy11741 181 LDIVLLIFV 189 (352)
Q Consensus 181 fD~V~~~~~ 189 (352)
+|+++.+..
T Consensus 100 iD~lv~~Ag 108 (285)
T 2p91_A 100 LDIIVHSIA 108 (285)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899888654
No 438
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=82.82 E-value=2.2 Score=36.47 Aligned_cols=82 Identities=17% Similarity=0.192 Sum_probs=54.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|++++.++..++.+.+.+...+.++.++.+|+.+...-.. + .-+..
T Consensus 24 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 102 (279)
T 3sju_A 24 PQTAFVTGVSSG-IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPI 102 (279)
T ss_dssp -CEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 678888887655 5555555554478899999999988777766655556678999999985320000 0 01468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 103 d~lv~nAg~ 111 (279)
T 3sju_A 103 GILVNSAGR 111 (279)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 998876543
No 439
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=82.71 E-value=7.3 Score=33.37 Aligned_cols=62 Identities=16% Similarity=0.079 Sum_probs=43.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEe-CCHHHHHHHHhccc-cCCCceEEEEecCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCD-FSENAVNILKEHEE-YKPDRCHAFVCDVTSE 170 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD-~s~~~l~~a~~~~~-~~~~~v~~~~~d~~~~ 170 (352)
++++|=.|++. .++..+++.+...|++|+.++ .++..++.+.+.+. ..+.++.++.+|+.+.
T Consensus 9 ~k~~lVTGas~-GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~ 72 (291)
T 1e7w_A 9 VPVALVTGAAK-RLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNV 72 (291)
T ss_dssp CCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSS
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCc
Confidence 56777777654 466666666544788999999 88877766554443 2345688999999864
No 440
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=82.57 E-value=2.3 Score=36.04 Aligned_cols=22 Identities=18% Similarity=0.164 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHhcCCCEEEEEE
Q psy11741 197 KMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 197 ~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.....+..+.++|+|||.+++.
T Consensus 52 ~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 52 FTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCeEEEEE
Confidence 4567888899999999999886
No 441
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=82.54 E-value=6.3 Score=33.15 Aligned_cols=79 Identities=13% Similarity=0.021 Sum_probs=50.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC-CCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN-PPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~~~~~fD~V~~ 186 (352)
++.+|==|.++| +...+++.+...|++|+.+|.+.. +.+.+.....+.++.++.+|+.+.... .-+..+..|+++.
T Consensus 9 GKvalVTGas~G-IG~aiA~~la~~Ga~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 9 GRKALVTGANTG-LGQAIAVGLAAAGAEVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp TCEEEETTTTSH-HHHHHHHHHHHTTCEEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred CCEEEEeCcCCH-HHHHHHHHHHHcCCEEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence 677777776665 555555555448899999998753 122222333456788999999875421 1234578999988
Q ss_pred hhh
Q psy11741 187 IFV 189 (352)
Q Consensus 187 ~~~ 189 (352)
+..
T Consensus 86 NAG 88 (247)
T 4hp8_A 86 NAG 88 (247)
T ss_dssp CCC
T ss_pred CCC
Confidence 553
No 442
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=82.53 E-value=1.8 Score=36.88 Aligned_cols=82 Identities=16% Similarity=0.039 Sum_probs=54.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC------CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF------APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~------~~~~f 181 (352)
++++|=.|+++| ++..+++.+...|++|+.++.++..++.+.+.+...+.++.++.+|+.+...-... .-+..
T Consensus 4 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 4 DKVILITGASGG-IGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCccH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 567787777654 55566655544788999999999888777666555556788899999853200000 01468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 83 D~lVnnAG~ 91 (264)
T 3tfo_A 83 DVLVNNAGV 91 (264)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876543
No 443
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=82.53 E-value=2.6 Score=36.19 Aligned_cols=82 Identities=20% Similarity=0.063 Sum_probs=55.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.+|.++..++.+.+.....+.++.++.+|+.+...-.. + .-+..
T Consensus 28 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 28 SPVALITGAGSG-IGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 667888887655 5556665554478899999999988877766655555678899999985310000 0 01468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 107 D~lVnnAg~ 115 (283)
T 3v8b_A 107 DIVVANAGI 115 (283)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876543
No 444
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=81.57 E-value=11 Score=32.06 Aligned_cols=110 Identities=16% Similarity=0.106 Sum_probs=63.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHH-HHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENA-VNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|++ |.++..+++.+...|++|++++.++.. .+.+.+.....+.++.++.+|+.+...-.. + .-+.
T Consensus 29 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 107 (283)
T 1g0o_A 29 GKVALVTGAG-RGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 107 (283)
T ss_dssp TCEEEETTTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 5677777765 456666666664478899999887542 333333333334568888999875310000 0 0136
Q ss_pred ceEEEehhhhhc------cChhHHH-----------HHHHHHHHhcCCCEEEEEE
Q psy11741 181 LDIVLLIFVLDA------INPNKMQ-----------HVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~------~~~~~~~-----------~~l~~~~~~LkpgG~l~~~ 218 (352)
.|+++.+..+.. .+.+++. .+++.+.+.|+.+|.++..
T Consensus 108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 162 (283)
T 1g0o_A 108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILM 162 (283)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEE
Confidence 899887654322 2233333 2345566667677877764
No 445
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=81.26 E-value=2.9 Score=35.65 Aligned_cols=71 Identities=18% Similarity=0.197 Sum_probs=48.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
.++||=.| . |.++..+++.+...+.+|++++-++.. ...++.++.+|+.+...-.....+.+|+|+..
T Consensus 3 ~~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~----------~~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih~ 70 (286)
T 3gpi_A 3 LSKILIAG-C-GDLGLELARRLTAQGHEVTGLRRSAQP----------MPAGVQTLIADVTRPDTLASIVHLRPEILVYC 70 (286)
T ss_dssp CCCEEEEC-C-SHHHHHHHHHHHHTTCCEEEEECTTSC----------CCTTCCEEECCTTCGGGCTTGGGGCCSEEEEC
T ss_pred CCcEEEEC-C-CHHHHHHHHHHHHCCCEEEEEeCCccc----------cccCCceEEccCCChHHHHHhhcCCCCEEEEe
Confidence 45788888 3 888888888775478899999876532 23568899999976431111123458998875
Q ss_pred hhh
Q psy11741 188 FVL 190 (352)
Q Consensus 188 ~~l 190 (352)
...
T Consensus 71 a~~ 73 (286)
T 3gpi_A 71 VAA 73 (286)
T ss_dssp HHH
T ss_pred CCC
Confidence 543
No 446
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=81.15 E-value=3 Score=34.82 Aligned_cols=81 Identities=15% Similarity=0.018 Sum_probs=52.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++. .++..+++.+...|++|+.++.++..++...+.....+.++.++.+|+.+...-.. + .-+.+
T Consensus 7 ~k~~lVTGas~-gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 7 GKVALITGASS-GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 67788888664 45666666554478899999999887766555443334568889999875310000 0 01468
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 86 d~lv~nAg 93 (247)
T 2jah_A 86 DILVNNAG 93 (247)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 447
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=81.15 E-value=3.9 Score=33.19 Aligned_cols=99 Identities=12% Similarity=0.035 Sum_probs=59.5
Q ss_pred eEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEehhh
Q psy11741 110 NILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFV 189 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~ 189 (352)
+||=.|+ +|.++..+++.+...+.+|++++-++..+.... ..++.++.+|+.+... ..-+.+|+|+....
T Consensus 2 kilVtGa-tG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~---~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLGA-TGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTE---ADLDSVDAVVDALS 71 (224)
T ss_dssp EEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCH---HHHTTCSEEEECCC
T ss_pred EEEEEcC-CCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccH---hhcccCCEEEECCc
Confidence 4666664 566777777666447889999999987654331 2458899999986432 11246899887664
Q ss_pred hhcc--ChhHHHHHHHHHHHhcCC-CEEEEEE
Q psy11741 190 LDAI--NPNKMQHVINQVYKYLKP-GGMVLFR 218 (352)
Q Consensus 190 l~~~--~~~~~~~~l~~~~~~Lkp-gG~l~~~ 218 (352)
..+- ...........+.+.++. |+.+++.
T Consensus 72 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~ 103 (224)
T 3h2s_A 72 VPWGSGRGYLHLDFATHLVSLLRNSDTLAVFI 103 (224)
T ss_dssp CCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEE
T ss_pred cCCCcchhhHHHHHHHHHHHHHHHcCCcEEEE
Confidence 4211 112223344555555544 4555554
No 448
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=81.03 E-value=0.45 Score=42.93 Aligned_cols=101 Identities=12% Similarity=0.126 Sum_probs=55.0
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++.+|+=+|+ |..+..+++.+...|.+|+++|.++..++.+.+.. +..+ ..|..... .+...-..+|+|+.
T Consensus 165 ~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~~~---~~~~~~~~-~l~~~~~~~DvVi~ 235 (369)
T 2eez_A 165 APASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GGRV---ITLTATEA-NIKKSVQHADLLIG 235 (369)
T ss_dssp CCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TTSE---EEEECCHH-HHHHHHHHCSEEEE
T ss_pred CCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---CceE---EEecCCHH-HHHHHHhCCCEEEE
Confidence 3689999998 45555555544336779999999998877765432 1122 12221100 00000135798876
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
....... ....-+.+.+.+.++|||.++..
T Consensus 236 ~~g~~~~--~~~~li~~~~l~~mk~gg~iV~v 265 (369)
T 2eez_A 236 AVLVPGA--KAPKLVTRDMLSLMKEGAVIVDV 265 (369)
T ss_dssp CCC---------CCSCHHHHTTSCTTCEEEEC
T ss_pred CCCCCcc--ccchhHHHHHHHhhcCCCEEEEE
Confidence 4432210 11111245667788999987654
No 449
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=80.79 E-value=4 Score=29.13 Aligned_cols=72 Identities=21% Similarity=0.115 Sum_probs=45.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCC-eEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDN-VFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
..+|+=+|+ |..+..++..+...+ .+|+++|.++..++.+.. ..+.+...|+.+.. .+...-..+|+|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~------~~~~~~~~d~~~~~-~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR------MGVATKQVDAKDEA-GLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT------TTCEEEECCTTCHH-HHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh------CCCcEEEecCCCHH-HHHHHHcCCCEEEE
Confidence 568999998 656666665553366 899999999987766551 23566777775321 00000135788876
Q ss_pred hh
Q psy11741 187 IF 188 (352)
Q Consensus 187 ~~ 188 (352)
..
T Consensus 76 ~~ 77 (118)
T 3ic5_A 76 AA 77 (118)
T ss_dssp CS
T ss_pred CC
Confidence 54
No 450
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=80.45 E-value=2.3 Score=35.81 Aligned_cols=82 Identities=11% Similarity=0.086 Sum_probs=54.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.+|.++..++...+.....+.++.++.+|+.+...-.. + .-+..
T Consensus 12 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 12 DAVAIVTGAAAG-IGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TCEEEECSCSSH-HHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 677887777655 5555555554378899999999988777666555555678999999985320000 0 01368
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 91 d~lv~nAg~ 99 (256)
T 3gaf_A 91 TVLVNNAGG 99 (256)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998876543
No 451
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=80.04 E-value=8.7 Score=35.58 Aligned_cols=98 Identities=12% Similarity=0.164 Sum_probs=56.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc----------------CCCceEEEEecCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY----------------KPDRCHAFVCDVTSED 171 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~----------------~~~~v~~~~~d~~~~~ 171 (352)
-.+|.=||+|. ++..++..+...|..|+++|.++..++.+++.... ....... ..|..
T Consensus 37 ~~kV~VIGaG~--MG~~iA~~la~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-~~~~~--- 110 (463)
T 1zcj_A 37 VSSVGVLGLGT--MGRGIAISFARVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-SSSTK--- 110 (463)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHTTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE-ESCGG---
T ss_pred CCEEEEECcCH--HHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh-cCCHH---
Confidence 45789999876 22333333322788999999999988877653210 0011121 22321
Q ss_pred CCCCCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 172 WNPPFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 172 ~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.-...|+|+..-. ..+ +-...+++++...++|+.+++..+
T Consensus 111 -----~~~~aDlVIeaVp-e~~--~~k~~v~~~l~~~~~~~~ii~snT 150 (463)
T 1zcj_A 111 -----ELSTVDLVVEAVF-EDM--NLKKKVFAELSALCKPGAFLCTNT 150 (463)
T ss_dssp -----GGTTCSEEEECCC-SCH--HHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -----HHCCCCEEEEcCC-CCH--HHHHHHHHHHHhhCCCCeEEEeCC
Confidence 0235788886431 111 234678888989999987766533
No 452
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=80.04 E-value=5.6 Score=33.67 Aligned_cols=82 Identities=13% Similarity=-0.031 Sum_probs=51.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-CHHHHHHHHhccccC-CCceEEEEecCCCC----CCCCC-C----
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-SENAVNILKEHEEYK-PDRCHAFVCDVTSE----DWNPP-F---- 176 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~----~~~~~-~---- 176 (352)
++++|=.|++ |.++..+++.+...|++|+++|. ++..++.+.+..... +.++.++.+|+.+. ..-.. +
T Consensus 11 ~k~~lVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 11 CPAAVITGGA-RRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp CCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 5677766655 55667776666447889999999 877666554443322 45688899999853 10000 0
Q ss_pred -CCCcceEEEehhhh
Q psy11741 177 -APESLDIVLLIFVL 190 (352)
Q Consensus 177 -~~~~fD~V~~~~~l 190 (352)
.-+..|+++.+..+
T Consensus 90 ~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 90 RAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 01368998886543
No 453
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=80.02 E-value=17 Score=36.17 Aligned_cols=47 Identities=19% Similarity=0.215 Sum_probs=35.4
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCC--CCe-EEEEEeCCHHHHHHHHhcc
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKN--DNV-FVYGCDFSENAVNILKEHE 153 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~--~~~-~v~gvD~s~~~l~~a~~~~ 153 (352)
+..+|||+-||.|.++.-+..+... ... .+.++|+++.+++.-+.|.
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 3568999999999998888664210 112 4679999999999888775
No 454
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=79.80 E-value=3.8 Score=35.37 Aligned_cols=82 Identities=18% Similarity=0.046 Sum_probs=52.6
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC------------HHHHHHHHhccccCCCceEEEEecCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS------------ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 174 (352)
.++++|=.|++.| ++..+++.+...|++|+++|.+ +..++.+.+.....+.++.++.+|+.+...-.
T Consensus 27 ~gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 105 (299)
T 3t7c_A 27 EGKVAFITGAARG-QGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ 105 (299)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence 3678888888765 4555555554488999999987 55555555444445567899999998532000
Q ss_pred C-C-----CCCcceEEEehhh
Q psy11741 175 P-F-----APESLDIVLLIFV 189 (352)
Q Consensus 175 ~-~-----~~~~fD~V~~~~~ 189 (352)
. + .-+..|+++.+..
T Consensus 106 ~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 106 AAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHhCCCCEEEECCC
Confidence 0 0 0146899887654
No 455
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=79.66 E-value=3.7 Score=34.59 Aligned_cols=82 Identities=15% Similarity=0.056 Sum_probs=53.2
Q ss_pred CCCeEEEEcCCcc-ccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-CCCceEEEEecCCCCCCC------CCCCC
Q psy11741 107 STKNILEIGCGVG-NSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-KPDRCHAFVCDVTSEDWN------PPFAP 178 (352)
Q Consensus 107 ~~~~vLD~GcG~G-~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~------~~~~~ 178 (352)
+++++|=-|++++ .++..+++.+...|++|+.+|.++..++.+.+.... .+.++.++.+|+.+...- ..-.-
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3788898886442 344555554433889999999998887777665554 345788999999853210 00012
Q ss_pred CcceEEEehh
Q psy11741 179 ESLDIVLLIF 188 (352)
Q Consensus 179 ~~fD~V~~~~ 188 (352)
+..|+++.+.
T Consensus 85 G~iD~lvnnA 94 (256)
T 4fs3_A 85 GNIDGVYHSI 94 (256)
T ss_dssp CCCSEEEECC
T ss_pred CCCCEEEecc
Confidence 5789888754
No 456
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=79.65 E-value=18 Score=38.09 Aligned_cols=42 Identities=10% Similarity=0.189 Sum_probs=35.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCe--EEEEEeCCHHHHHHHHhcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNV--FVYGCDFSENAVNILKEHE 153 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~--~v~gvD~s~~~l~~a~~~~ 153 (352)
..++||+-||.|.++.-+.. .|. .+.++|+++.+++.-+.|.
T Consensus 851 ~l~viDLFsG~GGlslGfe~----AG~~~vv~avEid~~A~~ty~~N~ 894 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQ----AGISETLWAIEMWDPAAQAFRLNN 894 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHH----TTSEEEEEEECCSHHHHHHHHHHC
T ss_pred CceEEecccCccHHHHHHHH----CCCCceEEEEECCHHHHHHHHHhC
Confidence 56899999999999998877 554 5789999999998888775
No 457
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=79.61 E-value=4.2 Score=34.76 Aligned_cols=81 Identities=14% Similarity=0.019 Sum_probs=52.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC----------------HHHHHHHHhccccCCCceEEEEecCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS----------------ENAVNILKEHEEYKPDRCHAFVCDVTSED 171 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s----------------~~~l~~a~~~~~~~~~~v~~~~~d~~~~~ 171 (352)
++++|=-|+++| ++..+++.+...|++|+++|.+ +..++...+.....+.++.++.+|+.+..
T Consensus 11 ~k~~lVTGas~g-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 11 GKVAFVTGAARG-QGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 678888888765 4555555554478999999987 55565555444444567899999998532
Q ss_pred CCCCC------CCCcceEEEehhh
Q psy11741 172 WNPPF------APESLDIVLLIFV 189 (352)
Q Consensus 172 ~~~~~------~~~~fD~V~~~~~ 189 (352)
.-... .-+..|+++.+..
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCc
Confidence 00000 0146899888654
No 458
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=79.54 E-value=4.2 Score=34.61 Aligned_cols=82 Identities=15% Similarity=0.097 Sum_probs=53.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-------------CHHHHHHHHhccccCCCceEEEEecCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-------------SENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 174 (352)
++++|=.|++.| ++..+++.+...|++|+++|. ++..++.+.+.....+.++.++.+|+.+...-.
T Consensus 15 gk~~lVTGas~g-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~ 93 (280)
T 3pgx_A 15 GRVAFITGAARG-QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALR 93 (280)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHH
Confidence 678888887665 455555555447899999998 666666665555555677889999998532000
Q ss_pred C-C-----CCCcceEEEehhhh
Q psy11741 175 P-F-----APESLDIVLLIFVL 190 (352)
Q Consensus 175 ~-~-----~~~~fD~V~~~~~l 190 (352)
. + .-+..|+++.+...
T Consensus 94 ~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 94 ELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 0 0 01468998876543
No 459
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=79.41 E-value=3.4 Score=35.13 Aligned_cols=84 Identities=17% Similarity=0.076 Sum_probs=53.1
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC------------HHHHHHHHhccccCCCceEEEEecCCCCCCCC
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS------------ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 174 (352)
.+++||=.|++.| ++..+++.+...|++|+++|.+ +..++...+.....+.++.++.+|+.+...-.
T Consensus 12 ~gk~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 90 (278)
T 3sx2_A 12 TGKVAFITGAARG-QGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS 90 (278)
T ss_dssp TTCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence 3678888886654 5555555554478999999987 55555554444444567899999998532000
Q ss_pred C-C-----CCCcceEEEehhhhh
Q psy11741 175 P-F-----APESLDIVLLIFVLD 191 (352)
Q Consensus 175 ~-~-----~~~~fD~V~~~~~l~ 191 (352)
. + .-+..|+++.+..+.
T Consensus 91 ~~~~~~~~~~g~id~lv~nAg~~ 113 (278)
T 3sx2_A 91 AALQAGLDELGRLDIVVANAGIA 113 (278)
T ss_dssp HHHHHHHHHHCCCCEEEECCCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCCC
Confidence 0 0 014689998866543
No 460
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=79.30 E-value=5.7 Score=33.83 Aligned_cols=89 Identities=15% Similarity=0.181 Sum_probs=53.0
Q ss_pred eEEEEcCCccccHHHHHhhcCCCCe--EEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCC-cceEEEe
Q psy11741 110 NILEIGCGVGNSVFPIVEHCKNDNV--FVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPE-SLDIVLL 186 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~-~fD~V~~ 186 (352)
+|.=||+|. ++..++..+...+. +|+++|.++..++.+++. +.... ...|..+ .-. ..|+|+.
T Consensus 3 ~I~iIG~G~--mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~----g~~~~-~~~~~~~-------~~~~~aDvVil 68 (281)
T 2g5c_A 3 NVLIVGVGF--MGGSFAKSLRRSGFKGKIYGYDINPESISKAVDL----GIIDE-GTTSIAK-------VEDFSPDFVML 68 (281)
T ss_dssp EEEEESCSH--HHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHT----TSCSE-EESCGGG-------GGGTCCSEEEE
T ss_pred EEEEEecCH--HHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHC----CCccc-ccCCHHH-------HhcCCCCEEEE
Confidence 577788764 44444443322555 899999999887776543 11101 1122211 013 5788876
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
. +++.....++.++...++++.+++.
T Consensus 69 a-----vp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 69 S-----SPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp C-----SCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred c-----CCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 4 3445566788888888999875554
No 461
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.27 E-value=8.1 Score=32.92 Aligned_cols=82 Identities=12% Similarity=0.080 Sum_probs=53.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++ |.++..+++.+...+.+|++++.++..++...+.....+.++.++.+|+.+...-.. + .-+.+
T Consensus 44 ~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 44 NKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5678877765 567777777776578899999988776665544444334568889999875310000 0 01468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+|+.+...
T Consensus 123 d~li~~Ag~ 131 (285)
T 2c07_A 123 DILVNNAGI 131 (285)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998886543
No 462
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=79.27 E-value=3.6 Score=35.06 Aligned_cols=81 Identities=14% Similarity=0.103 Sum_probs=52.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++. .++..+++.+...|++|++++.++..++...+.+...+.++.++.+|+.+...-.. + .-+.+
T Consensus 22 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 100 (277)
T 2rhc_B 22 SEVALVTGATS-GIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV 100 (277)
T ss_dssp SCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 66788888754 45666666554478899999999877766544443334568889999875310000 0 01368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 101 D~lv~~Ag 108 (277)
T 2rhc_B 101 DVLVNNAG 108 (277)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 463
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=78.98 E-value=8.7 Score=33.05 Aligned_cols=102 Identities=10% Similarity=0.055 Sum_probs=55.6
Q ss_pred CeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-C-CCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 109 KNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-K-PDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 109 ~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~-~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
.+|.=||+|. .+..++..+...+.+|+++|.++..++..++.... . .........++.... ...-.-..+|+|+.
T Consensus 4 m~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~vi~ 80 (316)
T 2ew2_A 4 MKIAIAGAGA--MGSRLGIMLHQGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPE-EIDHQNEQVDLIIA 80 (316)
T ss_dssp CEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGG-GCCTTSCCCSEEEE
T ss_pred CeEEEECcCH--HHHHHHHHHHhCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecch-hhcccCCCCCEEEE
Confidence 4788888864 44444444432677999999999877766543110 0 000000000010000 00000126898886
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.- ++.....+++.+...++|+..++..
T Consensus 81 ~v-----~~~~~~~v~~~l~~~l~~~~~iv~~ 107 (316)
T 2ew2_A 81 LT-----KAQQLDAMFKAIQPMITEKTYVLCL 107 (316)
T ss_dssp CS-----CHHHHHHHHHHHGGGCCTTCEEEEC
T ss_pred Ee-----ccccHHHHHHHHHHhcCCCCEEEEe
Confidence 42 3445677888898999888766553
No 464
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=78.96 E-value=0.79 Score=40.74 Aligned_cols=91 Identities=18% Similarity=0.212 Sum_probs=58.0
Q ss_pred CCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCC----CCCCC
Q psy11741 106 CSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP----PFAPE 179 (352)
Q Consensus 106 ~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~~~~ 179 (352)
.++.+||-+|+ |.|..+..+++. .|++|+++ .++.-++.+++.- ... .| ....... .....
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~---~Ga~Vi~~-~~~~~~~~~~~lG------a~~--i~-~~~~~~~~~~~~~~~~ 215 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALA---RGARVFAT-ARGSDLEYVRDLG------ATP--ID-ASREPEDYAAEHTAGQ 215 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHH---TTCEEEEE-ECHHHHHHHHHHT------SEE--EE-TTSCHHHHHHHHHTTS
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHH---CCCEEEEE-eCHHHHHHHHHcC------CCE--ec-cCCCHHHHHHHHhcCC
Confidence 35889999994 446777777776 67799999 8888888876642 112 22 1110000 00124
Q ss_pred cceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 180 SLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 180 ~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
.+|+|+-... . ..+..+.+.|+++|.+++.
T Consensus 216 g~D~vid~~g-----~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 216 GFDLVYDTLG-----G----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp CEEEEEESSC-----T----HHHHHHHHHEEEEEEEEES
T ss_pred CceEEEECCC-----c----HHHHHHHHHHhcCCeEEEE
Confidence 6999886322 1 3567778899999998874
No 465
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=78.70 E-value=1.9 Score=36.93 Aligned_cols=81 Identities=16% Similarity=0.016 Sum_probs=53.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+++|.++..++.+.+.....+.++.++.+|+.+...-.. + .-+..
T Consensus 8 gk~vlVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 8 GKIAIVTGASSG-IGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TCEEEESSTTSH-HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 667887777654 5555555554478899999999988877766655555678888999885320000 0 01468
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 87 D~lvnnAg 94 (280)
T 3tox_A 87 DTAFNNAG 94 (280)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 466
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=78.46 E-value=7.5 Score=35.68 Aligned_cols=99 Identities=14% Similarity=0.028 Sum_probs=59.6
Q ss_pred CCCCCeEEEEcC--CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEe--cCCCC----------
Q psy11741 105 TCSTKNILEIGC--GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVC--DVTSE---------- 170 (352)
Q Consensus 105 ~~~~~~vLD~Gc--G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~--d~~~~---------- 170 (352)
..++.+||=.|+ |.|..+..+++. .|+++++++.++.-++.+++.-. ...+... |....
T Consensus 218 ~~~g~~VlV~GasG~iG~~a~qla~~---~Ga~vi~~~~~~~~~~~~~~lGa----~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 218 MKQGDIVLIWGASGGLGSYAIQFVKN---GGGIPVAVVSSAQKEAAVRALGC----DLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHH---TTCEEEEEESSHHHHHHHHHTTC----CCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHH---cCCEEEEEeCCHHHHHHHHhcCC----CEEEecccccccccccccccccch
Confidence 345889999997 345666777775 67799999999998888865421 1111111 11000
Q ss_pred -----CCCC-CCCCCcceEEEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 171 -----DWNP-PFAPESLDIVLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 171 -----~~~~-~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
...+ ......+|+|+-.... ..+....++|++||.+++.-
T Consensus 291 ~~~~~~~~v~~~~g~g~Dvvid~~G~---------~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKAGREPDIVFEHTGR---------VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHHSSCCSEEEECSCH---------HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHhCCCceEEEECCCc---------hHHHHHHHHHhcCCEEEEEe
Confidence 0000 0002468998864321 24667778999999988753
No 467
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=78.21 E-value=4.2 Score=34.27 Aligned_cols=81 Identities=19% Similarity=0.142 Sum_probs=52.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.++.++..++...+.....+.++.++.+|+.+...-.. + .-+.+
T Consensus 7 ~k~vlVTGas~g-IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 7 GKVCLVTGAGGN-IGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 678887877654 5666666554478899999999877766555444334568889999875310000 0 01368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 86 d~lv~nAg 93 (262)
T 1zem_A 86 DFLFNNAG 93 (262)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 468
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=77.95 E-value=2.1 Score=36.49 Aligned_cols=82 Identities=15% Similarity=-0.030 Sum_probs=54.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC------CCCCCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN------PPFAPESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~~~~~f 181 (352)
++++|=.|++. .++..+++.+...|++|+.+|.++..++.+.+.+...+.++.++.+|+.+...- ....-+..
T Consensus 26 gk~~lVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 104 (271)
T 4ibo_A 26 GRTALVTGSSR-GLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDV 104 (271)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCC
Confidence 67788777654 456666665544788999999999887777666555556788899998853200 00011468
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 105 D~lv~nAg~ 113 (271)
T 4ibo_A 105 DILVNNAGI 113 (271)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 998886543
No 469
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=77.94 E-value=4.6 Score=34.42 Aligned_cols=82 Identities=15% Similarity=-0.049 Sum_probs=52.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC---ceEEEEecCCCCCCCCC-C-----CC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD---RCHAFVCDVTSEDWNPP-F-----AP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~~~~~-~-----~~ 178 (352)
+++||=.|++.| ++..+++.+...|++|+.+|.++..++.+.+.....+. ++.++.+|+.+...-.. + .-
T Consensus 11 ~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 11 DRTYLVTGGGSG-IGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 678888887654 55555555544788999999999877766555443332 68899999985320000 0 01
Q ss_pred CcceEEEehhhh
Q psy11741 179 ESLDIVLLIFVL 190 (352)
Q Consensus 179 ~~fD~V~~~~~l 190 (352)
+..|+++.+...
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 467988876543
No 470
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=77.72 E-value=4.8 Score=34.63 Aligned_cols=81 Identities=10% Similarity=-0.015 Sum_probs=52.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-----CCCceEEEEecCCCCCCCCC-CC----
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-----KPDRCHAFVCDVTSEDWNPP-FA---- 177 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-----~~~~v~~~~~d~~~~~~~~~-~~---- 177 (352)
+++||=.|++ |.++..+++.+...|.+|++++.++..++.+.+.+.. .+.++.++.+|+.+...-.. +.
T Consensus 18 ~k~vlVTGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 18 GQVAIVTGGA-TGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 6788888764 5566676666644788999999998776655443322 24568899999875310000 00
Q ss_pred -CCcceEEEehhh
Q psy11741 178 -PESLDIVLLIFV 189 (352)
Q Consensus 178 -~~~fD~V~~~~~ 189 (352)
-+.+|+|+.+..
T Consensus 97 ~~g~id~li~~Ag 109 (303)
T 1yxm_A 97 TFGKINFLVNNGG 109 (303)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 135899887654
No 471
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=77.52 E-value=0.41 Score=42.77 Aligned_cols=82 Identities=12% Similarity=0.031 Sum_probs=49.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCC--CCeEEEEEeCCHHHHHH---H----HhccccCCCceEEEEecCCCCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKN--DNVFVYGCDFSENAVNI---L----KEHEEYKPDRCHAFVCDVTSEDWNPPFAP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~--~~~~v~gvD~s~~~l~~---a----~~~~~~~~~~v~~~~~d~~~~~~~~~~~~ 178 (352)
+++||=.| |+|.++..+++.+.. .+.+|+++|.++..... . .......+.++.++.+|+.+...-.....
T Consensus 10 ~~~vlVTG-atG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~ 88 (362)
T 3sxp_A 10 NQTILITG-GAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK 88 (362)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence 67888777 567888888887765 68899999975531110 0 01111123467899999985321001113
Q ss_pred CcceEEEehhhh
Q psy11741 179 ESLDIVLLIFVL 190 (352)
Q Consensus 179 ~~fD~V~~~~~l 190 (352)
..+|+|+....+
T Consensus 89 ~~~D~vih~A~~ 100 (362)
T 3sxp_A 89 LHFDYLFHQAAV 100 (362)
T ss_dssp SCCSEEEECCCC
T ss_pred cCCCEEEECCcc
Confidence 568999876543
No 472
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=77.49 E-value=13 Score=31.57 Aligned_cols=61 Identities=11% Similarity=0.019 Sum_probs=40.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCH-HHHHHHHhccc-cCCCceEEEEecCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSE-NAVNILKEHEE-YKPDRCHAFVCDVTS 169 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~-~~l~~a~~~~~-~~~~~v~~~~~d~~~ 169 (352)
++++|=.|++. .++..+++.+...|++|+.++.++ ..++.+.+... ..+.++.++.+|+.+
T Consensus 23 ~k~~lVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~ 85 (288)
T 2x9g_A 23 APAAVVTGAAK-RIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTN 85 (288)
T ss_dssp CCEEEETTCSS-HHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSC
T ss_pred CCEEEEeCCCC-HHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCC
Confidence 56777777654 456666665543678999999987 55554443332 234568899999985
No 473
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=77.45 E-value=4 Score=35.11 Aligned_cols=81 Identities=21% Similarity=0.166 Sum_probs=52.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++. .++..+++.+...|.+|+++|.++..++...+.+...+.++.++.+|+.+...-.. + .-+.+
T Consensus 34 ~k~vlVTGas~-gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 112 (291)
T 3cxt_A 34 GKIALVTGASY-GIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEVGII 112 (291)
T ss_dssp TCEEEEETCSS-HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 67788887654 45666666554478899999999877766544443334568889999885320000 0 01458
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 113 D~lvnnAg 120 (291)
T 3cxt_A 113 DILVNNAG 120 (291)
T ss_dssp CEEEECCC
T ss_pred cEEEECCC
Confidence 99888654
No 474
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=77.44 E-value=6.8 Score=33.25 Aligned_cols=87 Identities=13% Similarity=0.153 Sum_probs=52.6
Q ss_pred eEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEehhh
Q psy11741 110 NILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLIFV 189 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~~~ 189 (352)
+|.=||||. ++..++..+...+.+|+++|.++..++.+.+. +.... ...|..+ . ...|+|+..
T Consensus 2 ~i~iiG~G~--~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~~----g~~~~-~~~~~~~-------~-~~~D~vi~a-- 64 (279)
T 2f1k_A 2 KIGVVGLGL--IGASLAGDLRRRGHYLIGVSRQQSTCEKAVER----QLVDE-AGQDLSL-------L-QTAKIIFLC-- 64 (279)
T ss_dssp EEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----TSCSE-EESCGGG-------G-TTCSEEEEC--
T ss_pred EEEEEcCcH--HHHHHHHHHHHCCCEEEEEECCHHHHHHHHhC----CCCcc-ccCCHHH-------h-CCCCEEEEE--
Confidence 566788764 44444444322567999999999887776532 11111 1222221 1 457988864
Q ss_pred hhccChhHHHHHHHHHHHhcCCCEEEE
Q psy11741 190 LDAINPNKMQHVINQVYKYLKPGGMVL 216 (352)
Q Consensus 190 l~~~~~~~~~~~l~~~~~~LkpgG~l~ 216 (352)
+++.....+++.+...++||..++
T Consensus 65 ---v~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 65 ---TPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ---SCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred ---CCHHHHHHHHHHHHhhCCCCCEEE
Confidence 344566778888888888887554
No 475
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=77.33 E-value=2.7 Score=35.38 Aligned_cols=80 Identities=14% Similarity=0.131 Sum_probs=51.5
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C--CC---CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P--PF---APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~--~~---~~~~ 180 (352)
++++|=.|++ |.++..+++.+...|.+|++++.++..++.+.+.....+.++.++.+|+.+...- + .. ..+.
T Consensus 5 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 5 GQVCVVTGAS-RGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TCEEEESSTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 5677777755 4566666666644788999999998777655444433345688899999853200 0 00 0246
Q ss_pred ceEEEehh
Q psy11741 181 LDIVLLIF 188 (352)
Q Consensus 181 fD~V~~~~ 188 (352)
+|+++.+.
T Consensus 84 id~lvnnA 91 (260)
T 2qq5_A 84 LDVLVNNA 91 (260)
T ss_dssp CCEEEECC
T ss_pred ceEEEECC
Confidence 89988876
No 476
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=77.33 E-value=8.1 Score=34.67 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=61.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC---CceEEEEecCCCCCCCCCCCCCcceEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP---DRCHAFVCDVTSEDWNPPFAPESLDIV 184 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~---~~v~~~~~d~~~~~~~~~~~~~~fD~V 184 (352)
+.+||.++.+.|.++..++.. .++.+.=|-......+.|....+ ..+++... .+ -....||+|
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~------~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~------~~~~~~~~v 104 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH------KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TA------DYPQQPGVV 104 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG------CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TS------CCCSSCSEE
T ss_pred CCCEEEECCCCCHHHHhhccC------CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--cc------ccccCCCEE
Confidence 568999999999999888753 23444335545455555554433 12444322 21 124679998
Q ss_pred EehhhhhccChhHHHHHHHHHHHhcCCCEEEEEEeC
Q psy11741 185 LLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFRDY 220 (352)
Q Consensus 185 ~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 220 (352)
+.... - +.......|..+...|+||+.+++..-
T Consensus 105 ~~~lp-k--~~~~l~~~L~~l~~~l~~~~~i~~~g~ 137 (375)
T 4dcm_A 105 LIKVP-K--TLALLEQQLRALRKVVTSDTRIIAGAK 137 (375)
T ss_dssp EEECC-S--CHHHHHHHHHHHHTTCCTTSEEEEEEE
T ss_pred EEEcC-C--CHHHHHHHHHHHHhhCCCCCEEEEEec
Confidence 87432 1 235677888999999999999877543
No 477
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=77.08 E-value=4.1 Score=35.58 Aligned_cols=82 Identities=13% Similarity=0.030 Sum_probs=53.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCC--CceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKP--DRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
+++||=.|+++| ++..+++.+...|++|++++.++..++.+.+.+...+ .++.++.+|+.+...-.. + .-+
T Consensus 8 ~k~vlVTGas~g-IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 86 (319)
T 3ioy_A 8 GRTAFVTGGANG-VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG 86 (319)
T ss_dssp TCEEEEETTTST-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCEEEEcCCchH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence 678888887655 5566666554478899999999988777665544322 268899999985320000 0 014
Q ss_pred cceEEEehhhh
Q psy11741 180 SLDIVLLIFVL 190 (352)
Q Consensus 180 ~fD~V~~~~~l 190 (352)
..|+++.+..+
T Consensus 87 ~id~lv~nAg~ 97 (319)
T 3ioy_A 87 PVSILCNNAGV 97 (319)
T ss_dssp CEEEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999886653
No 478
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=77.03 E-value=4.6 Score=33.84 Aligned_cols=81 Identities=16% Similarity=0.102 Sum_probs=51.0
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++. .++..+++.+...|++|++++.++..++...+.....+.++.++.+|+.+...-.. + .-+.+
T Consensus 2 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQ-GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 35677777654 45666666554478899999999877665544443334568889999885310000 0 01368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99888654
No 479
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=76.86 E-value=4.5 Score=33.93 Aligned_cols=81 Identities=14% Similarity=0.060 Sum_probs=51.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
+++||=.|++ |.++..+++.+...|++|++++.++..++...+.+...+.++.++.+|+.+...-.. + .-+..
T Consensus 14 ~k~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 14 NKVALVTAST-DGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 6677877654 456666666654478899999999877665544443334568888899875310000 0 01368
Q ss_pred eEEEehhh
Q psy11741 182 DIVLLIFV 189 (352)
Q Consensus 182 D~V~~~~~ 189 (352)
|+++.+..
T Consensus 93 D~lv~~Ag 100 (260)
T 2zat_A 93 DILVSNAA 100 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99887654
No 480
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=76.73 E-value=0.88 Score=34.33 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=29.7
Q ss_pred CCCCCcceEEEehhhhh-ccChhHHHHHHHHHHHhcCCCEEEEE
Q psy11741 175 PFAPESLDIVLLIFVLD-AINPNKMQHVINQVYKYLKPGGMVLF 217 (352)
Q Consensus 175 ~~~~~~fD~V~~~~~l~-~~~~~~~~~~l~~~~~~LkpgG~l~~ 217 (352)
.++..+||.|+...--. .. ..-...++..+...|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~-~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTD-IKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCS-CCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccch-hhcCHHHHHHHHHHhCCCCEEEe
Confidence 35588999998743211 10 12237899999999999999886
No 481
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=76.49 E-value=7.7 Score=33.69 Aligned_cols=81 Identities=19% Similarity=0.078 Sum_probs=50.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-CCCceEEE-EecCCCCCCCCCCCCCcceEEE
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-KPDRCHAF-VCDVTSEDWNPPFAPESLDIVL 185 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~-~~d~~~~~~~~~~~~~~fD~V~ 185 (352)
+++||=.|+ +|.++..+++.+...|.+|++++.++...+........ .+.++.++ .+|+.+... +...-..+|+|+
T Consensus 11 ~~~vlVTGa-tG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~-~~~~~~~~d~vi 88 (342)
T 1y1p_A 11 GSLVLVTGA-NGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGA-YDEVIKGAAGVA 88 (342)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTT-TTTTTTTCSEEE
T ss_pred CCEEEEECC-ccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHH-HHHHHcCCCEEE
Confidence 678887775 46677777666544788999999987655444332211 12457888 789886431 111123689988
Q ss_pred ehhhh
Q psy11741 186 LIFVL 190 (352)
Q Consensus 186 ~~~~l 190 (352)
.....
T Consensus 89 h~A~~ 93 (342)
T 1y1p_A 89 HIASV 93 (342)
T ss_dssp ECCCC
T ss_pred EeCCC
Confidence 76543
No 482
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=76.40 E-value=3.5 Score=35.15 Aligned_cols=82 Identities=16% Similarity=0.122 Sum_probs=54.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCcc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APESL 181 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~f 181 (352)
++++|=.|++.| ++..+++.+...|++|+.++.++..++...+.....+.++.++.+|+.+...-.. + .-+..
T Consensus 32 gk~~lVTGas~G-IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 32 GKRALITGASTG-IGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCCH-HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 678888887654 5555555554478899999999887776665555455678899999985320000 0 01368
Q ss_pred eEEEehhhh
Q psy11741 182 DIVLLIFVL 190 (352)
Q Consensus 182 D~V~~~~~l 190 (352)
|+++.+..+
T Consensus 111 D~lvnnAg~ 119 (276)
T 3r1i_A 111 DIAVCNAGI 119 (276)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 998886543
No 483
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=76.35 E-value=2.2 Score=34.85 Aligned_cols=75 Identities=8% Similarity=0.016 Sum_probs=46.3
Q ss_pred eEEEEcCCccccHHHHHhhcC-CCCeEEEEEeCCHH-HHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 110 NILEIGCGVGNSVFPIVEHCK-NDNVFVYGCDFSEN-AVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 110 ~vLD~GcG~G~~~~~l~~~~~-~~~~~v~gvD~s~~-~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
+||=.|+ +|.++..+++.+. ..+.+|++++.++. .++... ....++.++.+|+.+.. .+...-..+|+|+.+
T Consensus 7 ~vlVtGa-sg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~~~~~~~~~~D~~d~~-~~~~~~~~~d~vv~~ 80 (221)
T 3r6d_A 7 YITILGA-AGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----IDHERVTVIEGSFQNPG-XLEQAVTNAEVVFVG 80 (221)
T ss_dssp EEEEEST-TSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HTSTTEEEEECCTTCHH-HHHHHHTTCSEEEES
T ss_pred EEEEEeC-CcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cCCCceEEEECCCCCHH-HHHHHHcCCCEEEEc
Confidence 4777774 4556666666554 37889999999876 443322 12356889999997532 010001357999876
Q ss_pred hhh
Q psy11741 188 FVL 190 (352)
Q Consensus 188 ~~l 190 (352)
...
T Consensus 81 ag~ 83 (221)
T 3r6d_A 81 AME 83 (221)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 484
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=76.28 E-value=1 Score=39.60 Aligned_cols=56 Identities=16% Similarity=0.261 Sum_probs=35.6
Q ss_pred eEEE-EecCCCCCCCCCCCCCcceEEEehh--hhh---------ccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 160 CHAF-VCDVTSEDWNPPFAPESLDIVLLIF--VLD---------AINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 160 v~~~-~~d~~~~~~~~~~~~~~fD~V~~~~--~l~---------~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
..++ ++|..+.... +++++||+|++.= ... ++ ......+.++.++|+|||.+++..
T Consensus 39 ~~l~i~gD~l~~L~~--l~~~svDlI~tDPPY~~~~d~~~~~~~~~--~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAK--LPDDSVQLIICDPPYNIMLADWDDHMDYI--GWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHT--SCTTCEEEEEECCCSBCCGGGGGTCSSHH--HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHh--CccCCcCEEEECCCCCCCCCCccCHHHHH--HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4556 7776542211 2356788888721 110 11 345678888999999999999864
No 485
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=76.27 E-value=5.7 Score=33.87 Aligned_cols=82 Identities=9% Similarity=-0.048 Sum_probs=51.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-CHHHHHHHHhccccCCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-SENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
++++|=.|++.| ++..+++.+...|++|+.+|. ++..++...+.....+.++.++.+|+.+...-.. + .-+.
T Consensus 29 ~k~~lVTGas~G-IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 107 (280)
T 4da9_A 29 RPVAIVTGGRRG-IGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFGR 107 (280)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSC
T ss_pred CCEEEEecCCCH-HHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 677888887655 555555555447889999995 6666665555444445678999999986321000 0 0136
Q ss_pred ceEEEehhhh
Q psy11741 181 LDIVLLIFVL 190 (352)
Q Consensus 181 fD~V~~~~~l 190 (352)
.|+++.+..+
T Consensus 108 iD~lvnnAg~ 117 (280)
T 4da9_A 108 IDCLVNNAGI 117 (280)
T ss_dssp CCEEEEECC-
T ss_pred CCEEEECCCc
Confidence 8998886644
No 486
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=76.26 E-value=2.5 Score=39.52 Aligned_cols=89 Identities=16% Similarity=0.044 Sum_probs=54.2
Q ss_pred CCCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 107 STKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 107 ~~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
++++|+=+|+| .++..+++.+...|.+|+++|.++..++.|++. + ... .++.+ . -...|+|+.
T Consensus 273 ~GktV~IiG~G--~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~~~----G--a~~--~~l~e----~---l~~aDvVi~ 335 (494)
T 3ce6_A 273 GGKKVLICGYG--DVGKGCAEAMKGQGARVSVTEIDPINALQAMME----G--FDV--VTVEE----A---IGDADIVVT 335 (494)
T ss_dssp TTCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T--CEE--CCHHH----H---GGGCSEEEE
T ss_pred CcCEEEEEccC--HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHc----C--CEE--ecHHH----H---HhCCCEEEE
Confidence 48899999985 455555554433677999999999877776543 1 121 12211 0 135799887
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEEe
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFRD 219 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 219 (352)
.-.-.++ +-....+.+||||+++...
T Consensus 336 atgt~~~-------i~~~~l~~mk~ggilvnvG 361 (494)
T 3ce6_A 336 ATGNKDI-------IMLEHIKAMKDHAILGNIG 361 (494)
T ss_dssp CSSSSCS-------BCHHHHHHSCTTCEEEECS
T ss_pred CCCCHHH-------HHHHHHHhcCCCcEEEEeC
Confidence 5322221 1124567789999887643
No 487
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=76.20 E-value=4.4 Score=33.60 Aligned_cols=81 Identities=14% Similarity=0.093 Sum_probs=50.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcc-ccCCCceEEEEecCCCCCCCCC-CC-----CCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHE-EYKPDRCHAFVCDVTSEDWNPP-FA-----PES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~-~~~~~~v~~~~~d~~~~~~~~~-~~-----~~~ 180 (352)
+++||=.|++ |.++..+++.+...+.+|++++.++..++...+.. ...+.++.++.+|+.+...-.. +. -+.
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGA 80 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 4567877765 55666666655447889999999987766554433 2223568889999875310000 00 136
Q ss_pred ceEEEehhh
Q psy11741 181 LDIVLLIFV 189 (352)
Q Consensus 181 fD~V~~~~~ 189 (352)
+|+|+.+..
T Consensus 81 id~li~~Ag 89 (250)
T 2cfc_A 81 IDVLVNNAG 89 (250)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899887653
No 488
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=76.17 E-value=2.5 Score=37.89 Aligned_cols=94 Identities=10% Similarity=0.132 Sum_probs=57.4
Q ss_pred CCCCeEEEEcCC--ccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCC--C-CCCCCc
Q psy11741 106 CSTKNILEIGCG--VGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWN--P-PFAPES 180 (352)
Q Consensus 106 ~~~~~vLD~GcG--~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~--~-~~~~~~ 180 (352)
.++.+||=+|++ .|..+..+++. .|++|+++. |+.-++.+++.-. . .. .|..+..+. + ...++.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~---~Ga~Vi~~~-~~~~~~~~~~lGa----~-~v--i~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRL---SGYIPIATC-SPHNFDLAKSRGA----E-EV--FDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHH---TTCEEEEEE-CGGGHHHHHHTTC----S-EE--EETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHH---CCCEEEEEe-CHHHHHHHHHcCC----c-EE--EECCCchHHHHHHHHccCC
Confidence 348899999983 67788888886 567888885 8887887766421 1 11 122211000 0 011345
Q ss_pred ceEEEehhhhhccChhHHHHHHHHHHHhc-CCCEEEEEE
Q psy11741 181 LDIVLLIFVLDAINPNKMQHVINQVYKYL-KPGGMVLFR 218 (352)
Q Consensus 181 fD~V~~~~~l~~~~~~~~~~~l~~~~~~L-kpgG~l~~~ 218 (352)
+|+|+-...- ...+..+.+.| ++||.+++.
T Consensus 232 ~d~v~d~~g~--------~~~~~~~~~~l~~~~G~iv~~ 262 (371)
T 3gqv_A 232 LRYALDCITN--------VESTTFCFAAIGRAGGHYVSL 262 (371)
T ss_dssp CCEEEESSCS--------HHHHHHHHHHSCTTCEEEEES
T ss_pred ccEEEECCCc--------hHHHHHHHHHhhcCCCEEEEE
Confidence 9998853221 23466677788 699998874
No 489
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=75.94 E-value=4.1 Score=34.69 Aligned_cols=81 Identities=14% Similarity=0.029 Sum_probs=51.1
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCC---ceEEEEecCCCCCCCCC-C-----CC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPD---RCHAFVCDVTSEDWNPP-F-----AP 178 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~---~v~~~~~d~~~~~~~~~-~-----~~ 178 (352)
++++|=.|++. .++..+++.+...|++|+++|.++..++...+.....+. ++.++.+|+.+...-.. + .-
T Consensus 6 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 6 NKTVIITGSSN-GIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCC-hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 56777777554 456666665544788999999998877665544433233 68889999985310000 0 01
Q ss_pred CcceEEEehhh
Q psy11741 179 ESLDIVLLIFV 189 (352)
Q Consensus 179 ~~fD~V~~~~~ 189 (352)
+.+|+++.+..
T Consensus 85 g~iD~lv~nAg 95 (280)
T 1xkq_A 85 GKIDVLVNNAG 95 (280)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36899888654
No 490
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=75.92 E-value=4.3 Score=34.30 Aligned_cols=81 Identities=14% Similarity=-0.006 Sum_probs=51.2
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC--CCceEEEEecCCCCCCCCC-C-----CCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK--PDRCHAFVCDVTSEDWNPP-F-----APE 179 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~--~~~v~~~~~d~~~~~~~~~-~-----~~~ 179 (352)
++++|=.|++. .++..+++.+...|++|++++.++..++.+.+..... +.++.++.+|+.+...-.. + .-+
T Consensus 13 ~k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 13 DRVVLITGGGS-GLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TCEEEEETTTS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 67788888754 4566666655447889999999987766554443221 4568888999885320000 0 013
Q ss_pred cceEEEehhh
Q psy11741 180 SLDIVLLIFV 189 (352)
Q Consensus 180 ~fD~V~~~~~ 189 (352)
.+|+++.+..
T Consensus 92 ~id~lv~nAg 101 (267)
T 1iy8_A 92 RIDGFFNNAG 101 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6799887654
No 491
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=75.65 E-value=4.7 Score=33.18 Aligned_cols=82 Identities=12% Similarity=-0.053 Sum_probs=52.8
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccc-cCCCceEEEEecCCCCCCCCC-CC-----CCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEE-YKPDRCHAFVCDVTSEDWNPP-FA-----PES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~-~~~~~v~~~~~d~~~~~~~~~-~~-----~~~ 180 (352)
++++|=.|++. .++..+++.+...|.+|+.++.++..++.+.+... ..+.++.++.+|+.+...-.. +. -+.
T Consensus 2 ~k~vlITGas~-gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (235)
T 3l77_A 2 MKVAVITGASR-GIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGD 80 (235)
T ss_dssp CCEEEEESCSS-HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSS
T ss_pred CCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCC
Confidence 45778777654 45666666554478899999999887766654433 234678899999985320000 00 136
Q ss_pred ceEEEehhhh
Q psy11741 181 LDIVLLIFVL 190 (352)
Q Consensus 181 fD~V~~~~~l 190 (352)
.|+++.+..+
T Consensus 81 id~li~~Ag~ 90 (235)
T 3l77_A 81 VDVVVANAGL 90 (235)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 8998886544
No 492
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=75.60 E-value=2.6 Score=35.99 Aligned_cols=81 Identities=11% Similarity=0.080 Sum_probs=53.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCC-----CCCcce
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPF-----APESLD 182 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~-----~~~~fD 182 (352)
++++|=.|++. .++..+++.+...|++|+.+|.++..++.+.+.....+.++.++.+|+.+....... ..+..|
T Consensus 33 gk~~lVTGas~-GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~iD 111 (275)
T 4imr_A 33 GRTALVTGSSR-GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPVD 111 (275)
T ss_dssp TCEEEETTCSS-HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCCC
T ss_pred CCEEEEECCCC-HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCCC
Confidence 67788777654 456666665544788999999988776666555544556789999999864210000 014689
Q ss_pred EEEehhh
Q psy11741 183 IVLLIFV 189 (352)
Q Consensus 183 ~V~~~~~ 189 (352)
+++.+..
T Consensus 112 ~lvnnAg 118 (275)
T 4imr_A 112 ILVINAS 118 (275)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9887654
No 493
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=75.52 E-value=6.2 Score=33.50 Aligned_cols=82 Identities=17% Similarity=0.070 Sum_probs=52.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeC-------------CHHHHHHHHhccccCCCceEEEEecCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDF-------------SENAVNILKEHEEYKPDRCHAFVCDVTSEDWNP 174 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~-------------s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~ 174 (352)
++++|=.|+++| ++..+++.+...|++|+.+|. ++..++...+.....+.++.++.+|+.+...-.
T Consensus 11 ~k~~lVTGas~G-IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 11 GRVAFITGAARG-QGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TCEEEEESTTSH-HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCEEEEECCccH-HHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 678888887665 455555555447889999998 566666555544444567889999988532000
Q ss_pred C-C-----CCCcceEEEehhhh
Q psy11741 175 P-F-----APESLDIVLLIFVL 190 (352)
Q Consensus 175 ~-~-----~~~~fD~V~~~~~l 190 (352)
. + .-+..|+++.+..+
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 0 0 01468998886543
No 494
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=75.43 E-value=6.2 Score=36.74 Aligned_cols=100 Identities=23% Similarity=0.254 Sum_probs=56.6
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCC-Ce-EEEEEeCCHH----HHHHHHhccccC----------------CCceEEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKND-NV-FVYGCDFSEN----AVNILKEHEEYK----------------PDRCHAFVC 165 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~-~~-~v~gvD~s~~----~l~~a~~~~~~~----------------~~~v~~~~~ 165 (352)
..+|-=||+|.= +..++..+... |. +|+++|.++. .++..++..... ..++.+ ..
T Consensus 18 ~mkIaVIGlG~m--G~~lA~~la~~~G~~~V~~~D~~~~~~~~kv~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~-tt 94 (478)
T 3g79_A 18 IKKIGVLGMGYV--GIPAAVLFADAPCFEKVLGFQRNSKSSGYKIEMLNRGESPLKGEEPGLEELIGKVVKAGKFEC-TP 94 (478)
T ss_dssp CCEEEEECCSTT--HHHHHHHHHHSTTCCEEEEECCCCTTTTTHHHHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEE-ES
T ss_pred CCEEEEECcCHH--HHHHHHHHHHhCCCCeEEEEECChhHhHHHHHHHHhcCCCccccCCCHHHHHHhhcccCCeEE-eC
Confidence 457888877764 33443333225 88 9999999998 777665421100 122222 22
Q ss_pred cCCCCCCCCCCCCCcceEEEehhhhhc-------cChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 166 DVTSEDWNPPFAPESLDIVLLIFVLDA-------INPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 166 d~~~~~~~~~~~~~~fD~V~~~~~l~~-------~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|.. .-...|+|+..-.-.. .+........+.+.+.|+||.+++..
T Consensus 95 d~e--------a~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~ 146 (478)
T 3g79_A 95 DFS--------RISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLE 146 (478)
T ss_dssp CGG--------GGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEEC
T ss_pred cHH--------HHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEe
Confidence 211 0234688776432111 12245677888999999998766553
No 495
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=74.98 E-value=4.3 Score=35.13 Aligned_cols=91 Identities=18% Similarity=0.320 Sum_probs=54.3
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEeh
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLLI 187 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~~ 187 (352)
..+|.=||+|. .+..++..+...|.+|+++|.++..++.+.+. + ......+..+ . -...|+|+..
T Consensus 7 ~~~I~iIG~G~--mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g--~~~~~~~~~e----~---~~~aDvvi~~ 71 (303)
T 3g0o_A 7 DFHVGIVGLGS--MGMGAARSCLRAGLSTWGADLNPQACANLLAE----G--ACGAAASARE----F---AGVVDALVIL 71 (303)
T ss_dssp CCEEEEECCSH--HHHHHHHHHHHTTCEEEEECSCHHHHHHHHHT----T--CSEEESSSTT----T---TTTCSEEEEC
T ss_pred CCeEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc----C--CccccCCHHH----H---HhcCCEEEEE
Confidence 45788887764 55555554433778999999999888776653 1 1111233321 1 2356888764
Q ss_pred hhhhccChhHHHHHH---HHHHHhcCCCEEEEE
Q psy11741 188 FVLDAINPNKMQHVI---NQVYKYLKPGGMVLF 217 (352)
Q Consensus 188 ~~l~~~~~~~~~~~l---~~~~~~LkpgG~l~~ 217 (352)
-. ++.....++ +.+...++||..++-
T Consensus 72 vp----~~~~~~~v~~~~~~l~~~l~~g~ivv~ 100 (303)
T 3g0o_A 72 VV----NAAQVRQVLFGEDGVAHLMKPGSAVMV 100 (303)
T ss_dssp CS----SHHHHHHHHC--CCCGGGSCTTCEEEE
T ss_pred CC----CHHHHHHHHhChhhHHhhCCCCCEEEe
Confidence 21 123445555 667778888876553
No 496
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=74.65 E-value=7.4 Score=33.90 Aligned_cols=92 Identities=18% Similarity=0.148 Sum_probs=54.9
Q ss_pred CCCCeEEEEc-C-CccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceE
Q psy11741 106 CSTKNILEIG-C-GVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDI 183 (352)
Q Consensus 106 ~~~~~vLD~G-c-G~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~ 183 (352)
.++.+||=+| + |.|..+..+++. .|++|++++ ++.-++.+++.-. . . ..|..+.. .....-..+|+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~---~Ga~vi~~~-~~~~~~~~~~lGa----~-~--~i~~~~~~-~~~~~~~g~D~ 218 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQ---KGTTVITTA-SKRNHAFLKALGA----E-Q--CINYHEED-FLLAISTPVDA 218 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHH---TTCEEEEEE-CHHHHHHHHHHTC----S-E--EEETTTSC-HHHHCCSCEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHH---cCCEEEEEe-ccchHHHHHHcCC----C-E--EEeCCCcc-hhhhhccCCCE
Confidence 3488999886 4 457777778776 567899987 5555777765321 1 1 12322210 00001146899
Q ss_pred EEehhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 184 VLLIFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 184 V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
|+-... . ..+..+.++|++||.++..
T Consensus 219 v~d~~g-----~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 219 VIDLVG-----G----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp EEESSC-----H----HHHHHHGGGEEEEEEEEEC
T ss_pred EEECCC-----c----HHHHHHHHhccCCCEEEEe
Confidence 885322 1 1236778999999998874
No 497
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=74.63 E-value=7.8 Score=32.60 Aligned_cols=91 Identities=10% Similarity=0.136 Sum_probs=53.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeE-EEEEeCCHHHHHHHHhccccCCCceEEEEecCCCCCCCCCCCCCcceEEEe
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVF-VYGCDFSENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPPFAPESLDIVLL 186 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~-v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~V~~ 186 (352)
+.+|.=||||. .+..++..+...+.+ |+++|.++..++.+.+... +.. ..|..+ . -...|+|+.
T Consensus 10 ~m~i~iiG~G~--mG~~~a~~l~~~g~~~v~~~~~~~~~~~~~~~~~g-----~~~-~~~~~~----~---~~~~Dvvi~ 74 (266)
T 3d1l_A 10 DTPIVLIGAGN--LATNLAKALYRKGFRIVQVYSRTEESARELAQKVE-----AEY-TTDLAE----V---NPYAKLYIV 74 (266)
T ss_dssp GCCEEEECCSH--HHHHHHHHHHHHTCCEEEEECSSHHHHHHHHHHTT-----CEE-ESCGGG----S---CSCCSEEEE
T ss_pred CCeEEEEcCCH--HHHHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcC-----Cce-eCCHHH----H---hcCCCEEEE
Confidence 45788899863 444444433214556 8999999987776655321 222 223221 1 135798886
Q ss_pred hhhhhccChhHHHHHHHHHHHhcCCCEEEEEE
Q psy11741 187 IFVLDAINPNKMQHVINQVYKYLKPGGMVLFR 218 (352)
Q Consensus 187 ~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 218 (352)
. +++.....+++.+...+++|..++-.
T Consensus 75 a-----v~~~~~~~v~~~l~~~~~~~~ivv~~ 101 (266)
T 3d1l_A 75 S-----LKDSAFAELLQGIVEGKREEALMVHT 101 (266)
T ss_dssp C-----CCHHHHHHHHHHHHTTCCTTCEEEEC
T ss_pred e-----cCHHHHHHHHHHHHhhcCCCcEEEEC
Confidence 4 23344567778888888887655543
No 498
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=74.52 E-value=4.5 Score=34.74 Aligned_cols=81 Identities=15% Similarity=0.051 Sum_probs=51.4
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhccccC-CCceEEEEecCCCCCCC------CCCCCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEYK-PDRCHAFVCDVTSEDWN------PPFAPES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~-~~~v~~~~~d~~~~~~~------~~~~~~~ 180 (352)
+++||=.|++ |.++..+++.+...|.+|++++.++..++...+..... +.++.++.+|+.+...- ....-+.
T Consensus 26 ~k~vlITGas-ggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 26 GKVAFITGGG-TGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 6778888765 45666666655447889999999987766554433221 45688999998753100 0000136
Q ss_pred ceEEEehhh
Q psy11741 181 LDIVLLIFV 189 (352)
Q Consensus 181 fD~V~~~~~ 189 (352)
+|+|+.+..
T Consensus 105 id~li~~Ag 113 (302)
T 1w6u_A 105 PNIVINNAA 113 (302)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 799887654
No 499
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=74.33 E-value=3.7 Score=35.13 Aligned_cols=79 Identities=13% Similarity=0.097 Sum_probs=49.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCCHHHHHHHHhcccc-CCCceEEEEecCCCCCCCCC-C-----CCCc
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFSENAVNILKEHEEY-KPDRCHAFVCDVTSEDWNPP-F-----APES 180 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~-~~~~v~~~~~d~~~~~~~~~-~-----~~~~ 180 (352)
+++||=.|++ |.++..+++.+...|.+|++++.++..++........ ...++.++.+|+.+...-.. + .-+.
T Consensus 28 ~k~vlITGas-ggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVIVTGAS-KGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 6788877765 4566666665544788999999998877665443332 22368889999875210000 0 0136
Q ss_pred ceEEEeh
Q psy11741 181 LDIVLLI 187 (352)
Q Consensus 181 fD~V~~~ 187 (352)
+|+++.+
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8998866
No 500
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=74.24 E-value=6.9 Score=33.26 Aligned_cols=82 Identities=16% Similarity=0.069 Sum_probs=51.9
Q ss_pred CCeEEEEcCCccccHHHHHhhcCCCCeEEEEEeCC------------HHHHHHHHhccccCCCceEEEEecCCCCCCCCC
Q psy11741 108 TKNILEIGCGVGNSVFPIVEHCKNDNVFVYGCDFS------------ENAVNILKEHEEYKPDRCHAFVCDVTSEDWNPP 175 (352)
Q Consensus 108 ~~~vLD~GcG~G~~~~~l~~~~~~~~~~v~gvD~s------------~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~ 175 (352)
++++|=.|++.| ++..+++.+...|++|+.+|.+ ...++.........+.++.++.+|+.+...-..
T Consensus 10 ~k~~lVTGas~g-IG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 10 GKTALITGGARG-MGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCch-HHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 678888887655 5556655554478899999986 455555444444445678999999985310000
Q ss_pred -C-----CCCcceEEEehhhh
Q psy11741 176 -F-----APESLDIVLLIFVL 190 (352)
Q Consensus 176 -~-----~~~~fD~V~~~~~l 190 (352)
+ .-+..|+++.+..+
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 89 FVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHhcCCCCEEEECCCC
Confidence 0 01368998886544
Done!