BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11767
(966 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 279 bits (714), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 162/355 (45%), Positives = 214/355 (60%), Gaps = 74/355 (20%)
Query: 367 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--EEINLL 424
K S F++ YD+DL K LG+GS+S+CR+CV K + Q +AVKIIS++++ + +EI L
Sbjct: 1 MKDSPFYQHYDLDL-KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITAL 59
Query: 425 RACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVA 484
+ C+GHPNIV LH VF D++HT+ +RI++K F+E EAS IMR+LV+
Sbjct: 60 KLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVS 117
Query: 485 AVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLK---RESLHTPCFTLQYA 539
AV MH GVVHRDLKPENLLF+D DN IK++DFGFA LK + L TPCFTL YA
Sbjct: 118 AVSHMHDVGVVHRDLKPENLLFTD-ENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYA 176
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFH 599
APE+L Q+ GYDE+CDLWS LGVILYTML G+VPF
Sbjct: 177 APELLNQN--GYDESCDLWS------------------------LGVILYTMLSGQVPFQ 210
Query: 600 ARSRD---DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM--MR- 653
+ R SA+ IM +IK+G F+F+ EAW VS EAK+L + LLTV+P +R++M +R
Sbjct: 211 SHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRY 270
Query: 654 -------------------------------VKLTFHAFHQAQKEGFRLQDVTSA 677
VK TFHAF++ ++EGF LQ+V A
Sbjct: 271 NEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFCLQNVDKA 325
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 52/71 (73%), Gaps = 3/71 (4%)
Query: 105 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--EEINLL 162
K S F++ YD+DL K LG+GS+S+CR+CV K + Q +AVKIIS++++ + +EI L
Sbjct: 1 MKDSPFYQHYDLDL-KDKPLGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITAL 59
Query: 163 RACQGHPNICR 173
+ C+GHPNI +
Sbjct: 60 KLCEGHPNIVK 70
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 893 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 952
+HT+ +RI++K F+E EAS IMR+LV+AV MH GVVHRDLKPEN
Sbjct: 79 LHTFLVMELLNGGELFERIKKKKH--FSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 953 LLLSGISGNL-IKI 965
LL + + NL IKI
Sbjct: 137 LLFTDENDNLEIKI 150
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%), Gaps = 3/36 (8%)
Query: 19 NKKTRID-LLSNPWT-NGCDVSSTPLMTPDILLGSS 52
NK+ ++ L N W +G +SS PLMTPDI LGSS
Sbjct: 260 NKRLKMSGLRYNEWLQDGSQLSSNPLMTPDI-LGSS 294
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 155/276 (56%), Gaps = 37/276 (13%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+G GSYS C+RCV K+T EYAVK+I + K D SEEI +L HPNI+ L V+ D
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGK 94
Query: 445 HTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
H Y D+I RQK F+E EAS ++ + V ++HS+GVVHRDLKP N
Sbjct: 95 HVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 504 LLFSDPAGDN--IKVVDFGFA-CLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
+L+ D +G+ +++ DFGFA L+ E+ L TPC+T + APEVL+ + GYDE CD+W
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK--RQGYDEGCDIW 209
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
SLG++LYTML G PF A D+ I+ RI G+
Sbjct: 210 ------------------------SLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGK 244
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
F W+TVS AK+L +L V+P QR+ +V
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQV 280
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNI 171
+G GSYS C+RCV K+T EYAVK+I + K D SEEI +L HPNI
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNI 83
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 172 CRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQD 220
C+RCV K+T EYAVK+I + K D SEEI +L HPNI+ L V+ D
Sbjct: 43 CKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDD 92
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 894 HTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 952
H Y D+I RQK F+E EAS ++ + V ++HS+GVVHRDLKP N
Sbjct: 95 HVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 953 LLLSGISGN 961
+L SGN
Sbjct: 152 ILYVDESGN 160
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 114/276 (41%), Positives = 155/276 (56%), Gaps = 37/276 (13%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+G GSYS C+RCV K+T EYAVK+I + K D SEEI +L HPNI+ L V+ D
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGK 94
Query: 445 HTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
H Y D+I RQK F+E EAS ++ + V ++HS+GVVHRDLKP N
Sbjct: 95 HVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 504 LLFSDPAGDN--IKVVDFGFA-CLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
+L+ D +G+ +++ DFGFA L+ E+ L TPC+T + APEVL+ + GYDE CD+W
Sbjct: 152 ILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLK--RQGYDEGCDIW 209
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
SLG++LYTML G PF A D+ I+ RI G+
Sbjct: 210 ------------------------SLGILLYTMLAGYTPF-ANGPSDTPEEILTRIGSGK 244
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
F W+TVS AK+L +L V+P QR+ +V
Sbjct: 245 FTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQV 280
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNI 171
+G GSYS C+RCV K+T EYAVK+I + K D SEEI +L HPNI
Sbjct: 35 IGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNI 83
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 172 CRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQD 220
C+RCV K+T EYAVK+I + K D SEEI +L HPNI+ L V+ D
Sbjct: 43 CKRCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDD 92
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 894 HTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 952
H Y D+I RQK F+E EAS ++ + V ++HS+GVVHRDLKP N
Sbjct: 95 HVYLVTELMRGGELLDKILRQKF---FSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSN 151
Query: 953 LLLSGISGN 961
+L SGN
Sbjct: 152 ILYVDESGN 160
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 195 bits (495), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 163/285 (57%), Gaps = 41/285 (14%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGH 430
F + Y++ D +G GSYSVC+RC+ K+T E+AVKII + K D +EEI +L H
Sbjct: 20 FTDGYEVKED----IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFM 489
PNI+ L V+ D + Y D+I RQK F+E EAS ++ + V ++
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF---FSEREASAVLFTITKTVEYL 132
Query: 490 HSRGVVHRDLKPENLLFSDPAG--DNIKVVDFGFA-CLKRES--LHTPCFTLQYAAPEVL 544
H++GVVHRDLKP N+L+ D +G ++I++ DFGFA L+ E+ L TPC+T + APEVL
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVL 192
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
++ GYD CD+W SLGV+LYTML G PF A D
Sbjct: 193 --ERQGYDAACDIW------------------------SLGVLLYTMLTGYTPF-ANGPD 225
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ I+ARI G+F+ W++VS AK+L +L V+P QR+
Sbjct: 226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRL 270
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGH 168
F + Y++ D +G GSYSVC+RC+ K+T E+AVKII + K D +EEI +L H
Sbjct: 20 FTDGYEVKED----IGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 169 PNI 171
PNI
Sbjct: 76 PNI 78
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 167 GHPNICRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQD 220
G ++C+RC+ K+T E+AVKII + K D +EEI +L HPNI+ L V+ D
Sbjct: 33 GSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%), Gaps = 3/51 (5%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
+RQK F+E EAS ++ + V ++H++GVVHRDLKP N+L SGN
Sbjct: 108 LRQKF---FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 190 bits (483), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 116/290 (40%), Positives = 163/290 (56%), Gaps = 41/290 (14%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGH 430
F + Y++ D +G GSYSVC+RC+ K+T E+AVKII + K D +EEI +L H
Sbjct: 20 FTDGYEVKED----IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRI-RQKGRCGFTENEASRIMRQLVAAVHFM 489
PNI+ L V+ D + Y D+I RQK F+E EAS ++ + V ++
Sbjct: 76 PNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKF---FSEREASAVLFTITKTVEYL 132
Query: 490 HSRGVVHRDLKPENLLFSDPAG--DNIKVVDFGFA-CLKRES--LHTPCFTLQYAAPEVL 544
H++GVVHRDLKP N+L+ D +G ++I++ DFGFA L+ E+ L TPC+T + APEVL
Sbjct: 133 HAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVL 192
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
++ GYD CD+W SLGV+LYT L G PF A D
Sbjct: 193 --ERQGYDAACDIW------------------------SLGVLLYTXLTGYTPF-ANGPD 225
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
D+ I+ARI G+F+ W++VS AK+L L V+P QR+ V
Sbjct: 226 DTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALV 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 5/63 (7%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGH 168
F + Y++ D +G GSYSVC+RC+ K+T E+AVKII + K D +EEI +L H
Sbjct: 20 FTDGYEVKED----IGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQH 75
Query: 169 PNI 171
PNI
Sbjct: 76 PNI 78
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 167 GHPNICRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQGHPNIVNLHCVFQD 220
G ++C+RC+ K+T E+AVKII + K D +EEI +L HPNI+ L V+ D
Sbjct: 33 GSYSVCKRCIHKATNXEFAVKIIDKSKRDPTEEIEILLRYGQHPNIITLKDVYDD 87
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
F+E EAS ++ + V ++H++GVVHRDLKP N+L SGN
Sbjct: 113 FSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGN 155
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 162 bits (410), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 49/293 (16%)
Query: 367 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 419
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+ LL+ HPNI+ L + +D Y D I ++ R F+E++A+RI+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARII 127
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-NIKVVDFGFA-CLKRES-LHTPCFTL 536
+Q+ + + +MH +VHRDLKPEN+L D +IK++DFG + C ++ + + T
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRV 596
Y APEVLR YDE CD+WS GVILY +L G
Sbjct: 188 YYIAPEVLR---------------------------GTYDEKCDVWSAGVILYILLSGTP 220
Query: 597 PFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
PF+ ++ D I+ R++ G++ FD W T+S +AK+L + +LT +P+ RI
Sbjct: 221 PFYGKNEYD----ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I ++ R F+E++A+RI++Q+ + + +MH +VHRDLKPEN+LL
Sbjct: 110 DEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 25/107 (23%)
Query: 105 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 157
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 158 EINLLRACQGHPNICR--RCVEKS----------TGQEYAVKIISRK 192
E+ LL+ HPNI + +E S TG E +II RK
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 49/293 (16%)
Query: 367 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 419
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+ LL+ HPNI+ L + +D Y D I ++ R F+E++A+RI+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARII 127
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-NIKVVDFGFA-CLKRES-LHTPCFTL 536
+Q+ + + +MH +VHRDLKPEN+L D +IK++DFG + C ++ + + T
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRV 596
Y APEVLR YDE CD+WS GVILY +L G
Sbjct: 188 YYIAPEVLR---------------------------GTYDEKCDVWSAGVILYILLSGTP 220
Query: 597 PFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
PF+ ++ D I+ R++ G++ FD W T+S +AK+L + +LT +P+ RI
Sbjct: 221 PFYGKNEYD----ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I ++ R F+E++A+RI++Q+ + + +MH +VHRDLKPEN+LL
Sbjct: 110 DEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 25/107 (23%)
Query: 105 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 157
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 158 EINLLRACQGHPNICR--RCVEKS----------TGQEYAVKIISRK 192
E+ LL+ HPNI + +E S TG E +II RK
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 142/275 (51%), Gaps = 32/275 (11%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G C + TGQ+ A+K++ +E++ G P+IV + V+++
Sbjct: 36 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMH 95
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
H RI+++G FTE EA+ IMR + A+ F+HS + HRD+K
Sbjct: 96 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 155
Query: 501 PENLLFSDPAGDNI-KVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
PENLL++ D + K+ DFGFA + +L TPC+T Y APEVL +K
Sbjct: 156 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEK---------- 205
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
YD++CD+WSLGVI+Y +LCG PF++ + + + RI+ GQ
Sbjct: 206 ----------------YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 249
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+ F WS VS +AK+L + LL +P +R+ + +
Sbjct: 250 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ 284
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
RI+++G FTE EA+ IMR + A+ F+HS + HRD+KPENLL +
Sbjct: 116 RIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 162
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/293 (33%), Positives = 156/293 (53%), Gaps = 49/293 (16%)
Query: 367 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 419
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+ LL+ HPNI+ L + +D Y D I ++ R F+E++A+RI+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR--FSEHDAARII 127
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-NIKVVDFGFA-CLKRES-LHTPCFTL 536
+Q+ + + +MH +VHRDLKPEN+L D +IK++DFG + C ++ + + T
Sbjct: 128 KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTA 187
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRV 596
Y APEVLR YDE CD+WS GVILY +L G
Sbjct: 188 YYIAPEVLR---------------------------GTYDEKCDVWSAGVILYILLSGTP 220
Query: 597 PFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
PF+ ++ D I+ R++ G++ FD W T+S +AK+L + +LT +P+ RI
Sbjct: 221 PFYGKNEYD----ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRI 269
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 36/47 (76%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I ++ R F+E++A+RI++Q+ + + +MH +VHRDLKPEN+LL
Sbjct: 110 DEIIKRKR--FSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILL 154
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 25/107 (23%)
Query: 105 FKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII----SRKIDCS---E 157
F+G+ F E+Y++ +LG GS+ +C ++ T QEYAVK+I ++ D S
Sbjct: 16 FQGT-FAERYNI----VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 158 EINLLRACQGHPNICR--RCVEKS----------TGQEYAVKIISRK 192
E+ LL+ HPNI + +E S TG E +II RK
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRK 116
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 160 bits (404), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 142/275 (51%), Gaps = 32/275 (11%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G C + TGQ+ A+K++ +E++ G P+IV + V+++
Sbjct: 17 VLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEVDHHWQASGGPHIVCILDVYENMH 76
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
H RI+++G FTE EA+ IMR + A+ F+HS + HRD+K
Sbjct: 77 HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVK 136
Query: 501 PENLLFSDPAGDNI-KVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
PENLL++ D + K+ DFGFA + +L TPC+T Y APEVL +K
Sbjct: 137 PENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEK---------- 186
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
YD++CD+WSLGVI+Y +LCG PF++ + + + RI+ GQ
Sbjct: 187 ----------------YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQ 230
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+ F WS VS +AK+L + LL +P +R+ + +
Sbjct: 231 YGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQ 265
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
RI+++G FTE EA+ IMR + A+ F+HS + HRD+KPENLL +
Sbjct: 97 RIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYT 143
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 151 bits (381), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 43/275 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLH 437
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I + R F+E +A+RI+RQ+++ + +MH +VHR
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHR 150
Query: 498 DLKPENLLFSDPAGD-NIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL + D NI+++DFG + S + T Y APEVL YDE
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEK 207
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S GVILY +L G PF+ + D I+ ++
Sbjct: 208 CDVW------------------------STGVILYILLSGCPPFNGANEYD----ILKKV 239
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ F+ W VS AK+L + +LT P+ RI
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 274
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 32/40 (80%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
R F+E +A+RI+RQ+++ + +MH +VHRDLKPENLLL
Sbjct: 120 RKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 159
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNICR-- 173
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 174 ----------RCVEKSTGQEYAVKIISRK 192
E TG E +IISRK
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRK 121
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 175 CVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLHCVFQDE 221
C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+ F+D+
Sbjct: 45 CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 98
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 150 bits (380), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 43/275 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLH 437
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I + R F+E +A+RI+RQ+++ + +MH +VHR
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHR 173
Query: 498 DLKPENLLFSDPAGD-NIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL + D NI+++DFG + S + T Y APEVL YDE
Sbjct: 174 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEK 230
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S GVILY +L G PF+ + D I+ ++
Sbjct: 231 CDVW------------------------STGVILYILLSGCPPFNGANEYD----ILKKV 262
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ F+ W VS AK+L + +LT P+ RI
Sbjct: 263 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 297
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E +A+RI+RQ+++ + +MH +VHRDLKPENLLL
Sbjct: 146 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 182
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNICR-- 173
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI +
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 174 ----------RCVEKSTGQEYAVKIISRK 192
E TG E +IISRK
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRK 144
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 175 CVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLHCVFQDE 221
C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+ F+D+
Sbjct: 68 CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 121
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 43/275 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLH 437
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I + R F+E +A+RI+RQ+++ + +MH +VHR
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHR 174
Query: 498 DLKPENLLFSDPAGD-NIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL + D NI+++DFG + S + T Y APEVL YDE
Sbjct: 175 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEK 231
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S GVILY +L G PF+ + D I+ ++
Sbjct: 232 CDVW------------------------STGVILYILLSGCPPFNGANEYD----ILKKV 263
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ F+ W VS AK+L + +LT P+ RI
Sbjct: 264 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 298
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E +A+RI+RQ+++ + +MH +VHRDLKPENLLL
Sbjct: 147 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 183
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNICR-- 173
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI +
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 174 ----------RCVEKSTGQEYAVKIISRK 192
E TG E +IISRK
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRK 145
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 175 CVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLHCVFQDE 221
C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+ F+D+
Sbjct: 69 CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 122
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 150 bits (379), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 102/297 (34%), Positives = 151/297 (50%), Gaps = 57/297 (19%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--------EEI 421
+L+F+ + LG G+Y C +K TG E A+KII + + +E+
Sbjct: 13 NLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRI--RQKGRCGFTENEASRIM 479
+L+ HPNI+ L+ F+D+ + Y D I RQK F+E +A+ IM
Sbjct: 73 AVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIM 127
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN-IKVVDFGFAC------LKRESLHTP 532
+Q+++ ++H +VHRDLKPENLL + D IK+VDFG + +E L T
Sbjct: 128 KQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTA 187
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
Y APEVLR+ YDE CD+WS C GVILY +L
Sbjct: 188 ----YYIAPEVLRKK---YDEKCDVWS-------------------C-----GVILYILL 216
Query: 593 CGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
CG PF ++ + I+ R+++G+F+FD W+ VS EAK+L K +LT P++RI
Sbjct: 217 CGYPPFGGQTDQE----ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI 269
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
+RQK F+E +A+ IM+Q+++ ++H +VHRDLKPENLLL S + LIKI
Sbjct: 114 LRQK----FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKI 165
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 108 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--------EEI 159
+L+F+ + LG G+Y C +K TG E A+KII + + +E+
Sbjct: 13 NLYFQGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEV 72
Query: 160 NLLRACQGHPNICR 173
+L+ HPNI +
Sbjct: 73 AVLKQLD-HPNIMK 85
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 175 CVEKSTGQEYAVKIISRKIDCS--------EEINLLRACQGHPNIVNLHCVFQDE 221
C +K TG E A+KII + + +E+ +L+ HPNI+ L+ F+D+
Sbjct: 40 CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLYEFFEDK 93
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 150 bits (378), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 95/275 (34%), Positives = 143/275 (52%), Gaps = 43/275 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLH 437
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I + R F+E +A+RI+RQ+++ + +MH +VHR
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHR 156
Query: 498 DLKPENLLFSDPAGD-NIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL + D NI+++DFG + S + T Y APEVL YDE
Sbjct: 157 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLH---GTYDEK 213
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S GVILY +L G PF+ + D I+ ++
Sbjct: 214 CDVW------------------------STGVILYILLSGCPPFNGANEYD----ILKKV 245
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ F+ W VS AK+L + +LT P+ RI
Sbjct: 246 EKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRI 280
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 31/37 (83%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E +A+RI+RQ+++ + +MH +VHRDLKPENLLL
Sbjct: 129 FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL 165
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNICR-- 173
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI +
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 174 ----------RCVEKSTGQEYAVKIISRK 192
E TG E +IISRK
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRK 127
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 7/54 (12%)
Query: 175 CVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLHCVFQDE 221
C +K TGQE AVK+IS++ +++ +LLR Q HPNI+ L+ F+D+
Sbjct: 51 CKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDK 104
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 147/287 (51%), Gaps = 45/287 (15%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 427
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 27 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 428 QG--HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAA 485
+ HPNIV LH Q+E Y + I R ++E +AS ++Q++ +
Sbjct: 83 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 140
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPA-GDNIKVVDFGFACL--KRESLHTPCFTLQYAAPE 542
+ + HS G+VHR+LKPENLL + A G +K+ DFG A E+ H T Y +PE
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 200
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
VL++D Y + D+W + GVILY +L G PF
Sbjct: 201 VLKKDP--YSKPVDIW------------------------ACGVILYILLVGYPPFW--- 231
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ + A+IK G +++ + W TV+ EAK L S+LTVNP +RI
Sbjct: 232 -DEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 277
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 165
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 27 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 82
Query: 166 QG--HPNICR 173
+ HPNI R
Sbjct: 83 RKLQHPNIVR 92
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ ++ + HS G+VHR+LKPENLLL S G +K+
Sbjct: 125 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 172
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 149 ISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RA 204
S D EE+ +G ++ RRCV K+TG E+A KII+ K + + L R
Sbjct: 27 FSDNYDVKEELG-----KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 205 CQG--HPNIVNLHCVFQDE 221
C+ HPNIV LH Q+E
Sbjct: 82 CRKLQHPNIVRLHDSIQEE 100
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 149 bits (376), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 100/281 (35%), Positives = 145/281 (51%), Gaps = 57/281 (20%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--------EEINLLRACQGHPNIVNLH 437
LG G+Y C +K TG E A+KII + + +E+ +L+ HPNI+ L+
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLY 70
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRI--RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
F+D+ + Y D I RQK F+E +A+ IM+Q+++ ++H +V
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQK----FSEVDAAVIMKQVLSGTTYLHKHNIV 126
Query: 496 HRDLKPENLLFSDPAGDN-IKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDK 548
HRDLKPENLL + D IK+VDFG + +E L T Y APEVLR+
Sbjct: 127 HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAY----YIAPEVLRKK- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
YDE CD+WS C GVILY +LCG PF ++ +
Sbjct: 182 --YDEKCDVWS-------------------C-----GVILYILLCGYPPFGGQTDQE--- 212
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ R+++G+F+FD W+ VS EAK+L K +LT P++RI
Sbjct: 213 -ILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI 252
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
+RQK F+E +A+ IM+Q+++ ++H +VHRDLKPENLLL S + LIKI
Sbjct: 97 LRQK----FSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKI 148
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 9/58 (15%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--------EEINLLRACQGHPNICR 173
LG G+Y C +K TG E A+KII + + +E+ +L+ HPNI +
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMK 68
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 9/55 (16%)
Query: 175 CVEKSTGQEYAVKIISRKIDCS--------EEINLLRACQGHPNIVNLHCVFQDE 221
C +K TG E A+KII + + +E+ +L+ HPNI+ L+ F+D+
Sbjct: 23 CKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLYEFFEDK 76
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 147/287 (51%), Gaps = 45/287 (15%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 427
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 4 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 428 QG--HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAA 485
+ HPNIV LH Q+E Y + I R ++E +AS ++Q++ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIV--AREFYSEADASHCIQQILES 117
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPA-GDNIKVVDFGFACL--KRESLHTPCFTLQYAAPE 542
+ + HS G+VHR+LKPENLL + A G +K+ DFG A E+ H T Y +PE
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 177
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
VL++D Y + D+W + GVILY +L G PF
Sbjct: 178 VLKKDP--YSKPVDIW------------------------ACGVILYILLVGYPPF---- 207
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ + A+IK G +++ + W TV+ EAK L S+LTVNP +RI
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ ++ + HS G+VHR+LKPENLLL S G +K+
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 165
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 4 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 166 QG--HPNICR 173
+ HPNI R
Sbjct: 60 RKLQHPNIVR 69
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 149 ISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RA 204
S D EE+ +G ++ RRCV K+TG E+A KII+ K + + L R
Sbjct: 4 FSDNYDVKEELG-----KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 205 CQG--HPNIVNLHCVFQDE 221
C+ HPNIV LH Q+E
Sbjct: 59 CRKLQHPNIVRLHDSIQEE 77
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 147/287 (51%), Gaps = 45/287 (15%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 427
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 4 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 428 QG--HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAA 485
+ HPNIV LH Q+E Y + I R ++E +AS ++Q++ +
Sbjct: 60 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 117
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPA-GDNIKVVDFGFACL--KRESLHTPCFTLQYAAPE 542
+ + HS G+VHR+LKPENLL + A G +K+ DFG A E+ H T Y +PE
Sbjct: 118 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 177
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
VL++D Y + D+W + GVILY +L G PF
Sbjct: 178 VLKKDP--YSKPVDIW------------------------ACGVILYILLVGYPPF---- 207
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ + A+IK G +++ + W TV+ EAK L S+LTVNP +RI
Sbjct: 208 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 254
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ ++ + HS G+VHR+LKPENLLL S G +K+
Sbjct: 102 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 149
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 165
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 4 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 166 QG--HPNICR 173
+ HPNI R
Sbjct: 60 RKLQHPNIVR 69
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 149 ISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RA 204
S D EE+ +G ++ RRCV K+TG E+A KII+ K + + L R
Sbjct: 4 FSDNYDVKEELG-----KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 58
Query: 205 CQG--HPNIVNLHCVFQDE 221
C+ HPNIV LH Q+E
Sbjct: 59 CRKLQHPNIVRLHDSIQEE 77
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/287 (35%), Positives = 147/287 (51%), Gaps = 45/287 (15%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 427
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 3 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 58
Query: 428 QG--HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAA 485
+ HPNIV LH Q+E Y + I R ++E +AS ++Q++ +
Sbjct: 59 RKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDI--VAREFYSEADASHCIQQILES 116
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPA-GDNIKVVDFGFACL--KRESLHTPCFTLQYAAPE 542
+ + HS G+VHR+LKPENLL + A G +K+ DFG A E+ H T Y +PE
Sbjct: 117 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPE 176
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
VL++D Y + D+W + GVILY +L G PF
Sbjct: 177 VLKKDP--YSKPVDIW------------------------ACGVILYILLVGYPPF---- 206
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ + A+IK G +++ + W TV+ EAK L S+LTVNP +RI
Sbjct: 207 WDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRI 253
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ ++ + HS G+VHR+LKPENLLL S G +K+
Sbjct: 101 YSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKL 148
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 40/70 (57%), Gaps = 10/70 (14%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RAC 165
F + YD+ + LG G++SV RRCV K+TG E+A KII+ K + + L R C
Sbjct: 3 FSDNYDVKEE----LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 58
Query: 166 QG--HPNICR 173
+ HPNI R
Sbjct: 59 RKLQHPNIVR 68
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 149 ISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQEYAVKIISRKIDCSEEINLL----RA 204
S D EE+ +G ++ RRCV K+TG E+A KII+ K + + L R
Sbjct: 3 FSDNYDVKEELG-----KGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 57
Query: 205 CQG--HPNIVNLHCVFQDE 221
C+ HPNIV LH Q+E
Sbjct: 58 CRKLQHPNIVRLHDSIQEE 76
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 75 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 134
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 135 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 194
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 195 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 245
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 246 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 288
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 289 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 320
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 155 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 208
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 128
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 129 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 188
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 239
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 240 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 282
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 283 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 314
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 149 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 84
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 195
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 196 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 105 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 139/275 (50%), Gaps = 43/275 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNIVNLH 437
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI L+
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I + R F+E +A+RI+RQ+++ + + H +VHR
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYXHKNKIVHR 150
Query: 498 DLKPENLLFSDPAGD-NIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL + D NI+++DFG + S T Y APEVL YDE
Sbjct: 151 DLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLH---GTYDEK 207
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S GVILY +L G PF+ + D I+ ++
Sbjct: 208 CDVW------------------------STGVILYILLSGCPPFNGANEYD----ILKKV 239
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ F+ W VS AK+L + LT P+ RI
Sbjct: 240 EKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRI 274
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 31/40 (77%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
R F+E +A+RI+RQ+++ + + H +VHRDLKPENLLL
Sbjct: 120 RKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL 159
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 44/89 (49%), Gaps = 19/89 (21%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK--IDCSEEINLLRACQ-----GHPNICR-- 173
+LG GS+ C +K TGQE AVK+IS++ +++ +LLR Q HPNI +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 174 ----------RCVEKSTGQEYAVKIISRK 192
E TG E +IISRK
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRK 121
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/297 (31%), Positives = 139/297 (46%), Gaps = 55/297 (18%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------------CS 418
F+++YD ++G G SV RRCV ++TG E+AVKI+ +
Sbjct: 92 FYQKYD----PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 419 EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
E ++LR GHP+I+ L ++ + D + +K +E E I
Sbjct: 148 RETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK--VALSEKETRSI 205
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTL 536
MR L+ AV F+H+ +VHRDLKPEN+L D I++ DFGF+C E L C T
Sbjct: 206 MRSLLEAVSFLHANNIVHRDLKPENILLDDNM--QIRLSDFGFSCHLEPGEKLRELCGTP 263
Query: 537 QYAAPEVLR----QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
Y APE+L+ + GY + DLW+ C GVIL+T+L
Sbjct: 264 GYLAPEILKCSMDETHPGYGKEVDLWA-------------------C-----GVILFTLL 299
Query: 593 CGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
G PF R + + ++ I EGQ+ F + W SS K+L LL V+P R+
Sbjct: 300 AGSPPFWHRRQ----ILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARL 352
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+ +E E IMR L+ AV F+H+ +VHRDLKPEN+LL
Sbjct: 194 KVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILL 233
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 38/75 (50%), Gaps = 17/75 (22%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------------CS 156
F+++YD ++G G SV RRCV ++TG E+AVKI+ +
Sbjct: 92 FYQKYD----PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATR 147
Query: 157 EEINLLRACQGHPNI 171
E ++LR GHP+I
Sbjct: 148 RETHILRQVAGHPHI 162
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 13/62 (20%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIISRKID-------------CSEEINLLRACQGHPNIV 212
+G ++ RRCV ++TG E+AVKI+ + E ++LR GHP+I+
Sbjct: 104 RGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHII 163
Query: 213 NL 214
L
Sbjct: 164 TL 165
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 272 PIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
P +D S V D ISRLL DP R L AE+ +HPFF
Sbjct: 327 PEWDDRSSTVKDLISRLLQVDPEAR-----LTAEQALQHPFF 363
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 144 bits (363), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 30 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 89
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 90 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 149
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 150 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 200
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 201 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 243
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 244 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 275
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 110 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 163
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 31 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 90
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 91 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 150
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 151 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 201
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 202 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 244
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 245 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 276
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 111 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 164
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 39 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 98
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 99 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 158
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 159 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 209
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 210 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 252
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 253 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 284
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 119 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 172
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 29 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 88
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 89 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 148
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 149 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 199
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 200 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 242
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 243 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 274
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 109 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 162
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 82
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 83 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 193
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 194 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 103 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 156
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 84
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 195
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 196 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 238
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 239 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 270
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 105 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 132/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 24 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 83
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 84 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 143
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 144 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 194
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 195 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 237
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 238 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 269
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 104 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 157
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 96/308 (31%), Positives = 143/308 (46%), Gaps = 56/308 (18%)
Query: 377 DMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE-----EINLLRACQGHP 431
DM + +LG+G+Y+ + V G+EYAVKII ++ S E+ L CQG+
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L F+D+ Y I+++ F E EASR++R + AA+ F+H+
Sbjct: 72 NILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHT 129
Query: 492 RGVVHRDLKPENLLFSDPAGDN-IKVVDFGFAC----------LKRESLHTPCFTLQYAA 540
+G+ HRDLKPEN+L P + +K+ DF + L TPC + +Y A
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMA 189
Query: 541 PEVLR---QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVP 597
PEV+ + YD+ CDLWS LGV+LY ML G P
Sbjct: 190 PEVVEVFTDQATFYDKRCDLWS------------------------LGVVLYIMLSGYPP 225
Query: 598 FHARSRDDSAL-----------SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPA 646
F D + I+EG++ F + W+ +SSEAK+L LL +
Sbjct: 226 FVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAK 285
Query: 647 QRIRMMRV 654
QR+ +V
Sbjct: 286 QRLSAAQV 293
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 30/36 (83%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
F E EASR++R + AA+ F+H++G+ HRDLKPEN+L
Sbjct: 108 FNEREASRVVRDVAAALDFLHTKGIAHRDLKPENIL 143
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 5/62 (8%)
Query: 115 DMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-----EEINLLRACQGHP 169
DM + +LG+G+Y+ + V G+EYAVKII ++ S E+ L CQG+
Sbjct: 12 DMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNK 71
Query: 170 NI 171
NI
Sbjct: 72 NI 73
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 176 VEKSTGQEYAVKIISRKIDCSE-----EINLLRACQGHPNIVNLHCVFQDEV 222
V G+EYAVKII ++ S E+ L CQG+ NI+ L F+D+
Sbjct: 33 VSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDT 84
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 139/275 (50%), Gaps = 44/275 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLHCV 439
LG G++SV RRCV+ GQEYA KII ++K+ + L R C+ HPNIV LH
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+E H Y + I R ++E +AS ++Q++ AV H GVVHRDL
Sbjct: 90 ISEEGHHYLIFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 147
Query: 500 KPENLLF-SDPAGDNIKVVDFGFACLKRESLHTPCF----TLQYAAPEVLRQDKSGYDEN 554
KPENLL S G +K+ DFG A ++ E F T Y +PEVLR+D Y +
Sbjct: 148 KPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLSPEVLRKDP--YGKP 204
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
DLW + GVILY +L G PF D+ + +I
Sbjct: 205 VDLW------------------------ACGVILYILLVGYPPF----WDEDQHRLYQQI 236
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
K G ++F + W TV+ EAK+L +LT+NP++RI
Sbjct: 237 KAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 271
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ AV H GVVHRDLKPENLLL S + G +K+
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKL 165
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNICR 173
LG G++SV RRCV+ GQEYA KII ++K+ + L R C+ HPNI R
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 85
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLHCVFQ 219
+G ++ RRCV+ GQEYA KII ++K+ + L R C+ HPNIV LH
Sbjct: 32 KGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS 91
Query: 220 DE 221
+E
Sbjct: 92 EE 93
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 88/272 (32%), Positives = 131/272 (48%), Gaps = 33/272 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 82
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 83 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 142
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL PC+T Y APEVL +K
Sbjct: 143 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEK--------- 193
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD+WSLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 194 -----------------YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 236
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 237 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 268
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 103 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 156
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 139 bits (350), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 138/274 (50%), Gaps = 42/274 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNIVNLHCV 439
LG G++SV RRC++ TGQEYA KII ++K+ + L R + HPNIV LH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+E Y + I R ++E +AS ++Q++ +V+ H G+VHRDL
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 500 KPENLLF-SDPAGDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
KPENLL S G +K+ DFG A +++ T Y +PEVLR+D Y +
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP--YGKPV 187
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+W + GVILY +L G PF D+ + +IK
Sbjct: 188 DMW------------------------ACGVILYILLVGYPPFW----DEDQHRLYQQIK 219
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
G ++F + W TV+ EAK+L +LT+NPA+RI
Sbjct: 220 AGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI 253
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS-GNLIKI 965
++E +AS ++Q++ +V+ H G+VHRDLKPENLLL+ S G +K+
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNICR 173
LG G++SV RRC++ TGQEYA KII ++K+ + L R + HPNI R
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 67
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNIVNLHCVFQ 219
+G ++ RRC++ TGQEYA KII ++K+ + L R + HPNIV LH
Sbjct: 14 KGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS 73
Query: 220 DE 221
+E
Sbjct: 74 EE 75
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/275 (33%), Positives = 138/275 (50%), Gaps = 46/275 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS--------EEINLLRACQGHPNIVNLH 437
LG G+Y C +K T E A+KII RK S EE+ +L+ HPNI+ L+
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKII-RKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLY 102
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
F+D+ + Y D I R F E +A+ I++Q+++ V ++H +VHR
Sbjct: 103 DFFEDKRNYYLVMECYKGGELFDEIIH--RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHR 160
Query: 498 DLKPENLLFSDPAGDN-IKVVDFGFACL--KRESLHTPCFTLQYAAPEVLRQDKSGYDEN 554
DLKPENLL D IK+VDFG + + ++ + T Y APEVLR+ YDE
Sbjct: 161 DLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKK---YDEK 217
Query: 555 CDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARI 614
CD+W S+GVIL+ +L G PF ++ + I+ ++
Sbjct: 218 CDVW------------------------SIGVILFILLAGYPPFGGQTDQE----ILRKV 249
Query: 615 KEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
++G++ FD+ W VS AK+L K +L + +RI
Sbjct: 250 EKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRI 284
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
R F E +A+ I++Q+++ V ++H +VHRDLKPENLLL + LIKI
Sbjct: 130 RMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKI 180
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 147/310 (47%), Gaps = 43/310 (13%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID---CSEEINLLRACQGHPNIVNLHCVFQD 442
LG G+ S+ RC +K T + YA+K++ + +D EI +L HPNI+ L +F+
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFET 119
Query: 443 EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPE 502
DRI +KG ++E +A+ ++Q++ AV ++H G+VHRDLKPE
Sbjct: 120 PTEISLVLELVTGGELFDRIVEKGY--YSERDAADAVKQILEAVAYLHENGIVHRDLKPE 177
Query: 503 NLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENCDLWS 559
NLL++ PA D +K+ DFG + + + T C T Y APE+LR Y D+W
Sbjct: 178 NLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILR--GCAYGPEVDMW- 234
Query: 560 LGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQF 619
S+G+I Y +LCG PF+ D + RI ++
Sbjct: 235 -----------------------SVGIITYILLCGFEPFYDERGDQ---FMFRRILNCEY 268
Query: 620 NFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEGFRLQDVTSAKL 679
F + W VS AK+L + L+ ++P +R+ + H + + F D KL
Sbjct: 269 YFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQA--LQHPWVTGKAANFVHMDTAQKKL 326
Query: 680 AQ---RRKNK 686
+ RRK K
Sbjct: 327 QEFNARRKLK 336
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%), Gaps = 2/48 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
DRI +KG ++E +A+ ++Q++ AV ++H G+VHRDLKPENLL +
Sbjct: 137 DRIVEKGY--YSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYA 182
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIISRKID---CSEEINLLRACQGHPNIVNLHCVFQ 219
+G +I RC +K T + YA+K++ + +D EI +L HPNI+ L +F+
Sbjct: 63 RGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNIIKLKEIFE 118
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID---CSEEINLLRACQGHPNICR 173
LG G+ S+ RC +K T + YA+K++ + +D EI +L HPNI +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRTEIGVLLRLS-HPNIIK 112
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 138 bits (348), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 138/274 (50%), Gaps = 42/274 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNIVNLHCV 439
LG G++SV RRC++ TGQEYA KII ++K+ + L R + HPNIV LH
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+E Y + I R ++E +AS ++Q++ +V+ H G+VHRDL
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILESVNHCHLNGIVHRDL 129
Query: 500 KPENLLF-SDPAGDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
KPENLL S G +K+ DFG A +++ T Y +PEVLR+D Y +
Sbjct: 130 KPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDP--YGKPV 187
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+W + GVILY +L G PF D+ + +IK
Sbjct: 188 DMW------------------------ACGVILYILLVGYPPF----WDEDQHRLYQQIK 219
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
G ++F + W TV+ EAK+L +LT+NPA+RI
Sbjct: 220 AGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI 253
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS-GNLIKI 965
++E +AS ++Q++ +V+ H G+VHRDLKPENLLL+ S G +K+
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKL 147
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 6/56 (10%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNICR 173
LG G++SV RRC++ TGQEYA KII ++K+ + L R + HPNI R
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 67
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 6/62 (9%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GHPNIVNLHCVFQ 219
+G ++ RRC++ TGQEYA KII ++K+ + L R + HPNIV LH
Sbjct: 14 KGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS 73
Query: 220 DE 221
+E
Sbjct: 74 EE 75
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 132/297 (44%), Gaps = 56/297 (18%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 418
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 15 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 419 -EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
+E+++LR GHPNI+ L ++ + D + +K +E E +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFT 535
IMR L+ + +H +VHRDLKPEN+L D NIK+ DFGF+C E L + C T
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLRSVCGT 186
Query: 536 LQYAAPEV----LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
Y APE+ + + GY + D+W S GVI+YT+
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMW------------------------STGVIMYTL 222
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
L G PF R + + ++ I G + F + W S K+L L V P +R
Sbjct: 223 LAGSPPFWHRKQ----MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 156
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 15 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 157 -EEINLLRACQGHPNICR 173
+E+++LR GHPNI +
Sbjct: 71 LKEVDILRKVSGHPNIIQ 88
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+ +E E +IMR L+ + +H +VHRDLKPEN+LL
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIISRKIDCS--------------EEINLLRACQGHPNI 211
+G ++ RRC+ K T +EYAVKII S +E+++LR GHPNI
Sbjct: 27 RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 86
Query: 212 VNLHCVFQ 219
+ L ++
Sbjct: 87 IQLKDTYE 94
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 138 bits (347), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/289 (34%), Positives = 143/289 (49%), Gaps = 48/289 (16%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-- 428
F E+Y + + LG G++SV RRCV+ GQEYA II ++K+ + L R +
Sbjct: 9 FTEEYQLFEE----LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64
Query: 429 ---GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAA 485
HPNIV LH +E H Y + I R ++E +AS ++Q++ A
Sbjct: 65 RLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDI--VAREYYSEADASHCIQQILEA 122
Query: 486 VHFMHSRGVVHRDLKPENLLF-SDPAGDNIKVVDFGFACLKRESLHTPCF----TLQYAA 540
V H GVVHR+LKPENLL S G +K+ DFG A ++ E F T Y +
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA-IEVEGEQQAWFGFAGTPGYLS 181
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHA 600
PEVLR+D Y + DLW + GVILY +L G PF
Sbjct: 182 PEVLRKDP--YGKPVDLW------------------------ACGVILYILLVGYPPF-- 213
Query: 601 RSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D+ + +IK G ++F + W TV+ EAK+L +LT+NP++RI
Sbjct: 214 --WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI 260
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ AV H GVVHR+LKPENLLL S + G +K+
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKL 154
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 38/70 (54%), Gaps = 10/70 (14%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-- 166
F E+Y + + LG G++SV RRCV+ GQEYA II ++K+ + L R +
Sbjct: 9 FTEEYQLFEE----LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARIC 64
Query: 167 ---GHPNICR 173
HPNI R
Sbjct: 65 RLLKHPNIVR 74
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
Query: 156 SEEINLLRAC-QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINLLRACQ-----GH 208
+EE L +G ++ RRCV+ GQEYA II ++K+ + L R + H
Sbjct: 10 TEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKH 69
Query: 209 PNIVNLHCVFQDE 221
PNIV LH +E
Sbjct: 70 PNIVRLHDSISEE 82
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 131/297 (44%), Gaps = 56/297 (18%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 418
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 2 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 57
Query: 419 -EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
+E+++LR GHPNI+ L ++ + D + +K +E E +
Sbjct: 58 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 115
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFT 535
IMR L+ + +H +VHRDLKPEN+L D NIK+ DFGF+C E L C T
Sbjct: 116 IMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGT 173
Query: 536 LQYAAPEV----LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
Y APE+ + + GY + D+W S GVI+YT+
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMW------------------------STGVIMYTL 209
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
L G PF R + + ++ I G + F + W S K+L L V P +R
Sbjct: 210 LAGSPPFWHRKQ----MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 262
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 156
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 2 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 57
Query: 157 -EEINLLRACQGHPNICR 173
+E+++LR GHPNI +
Sbjct: 58 LKEVDILRKVSGHPNIIQ 75
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+ +E E +IMR L+ + +H +VHRDLKPEN+LL
Sbjct: 105 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 144
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIISRKIDCS--------------EEINLLRACQGHPNI 211
+G ++ RRC+ K T +EYAVKII S +E+++LR GHPNI
Sbjct: 14 RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 73
Query: 212 VNLHCVFQ 219
+ L ++
Sbjct: 74 IQLKDTYE 81
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 137/272 (50%), Gaps = 42/272 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI------DCSEEINLLRACQGHPNIVNLHCV 439
LG G++S EK+TG+ +AVK I +K EI +LR + H NIV L +
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIK-HENIVALEDI 88
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
++ H Y DRI +KG +TE +AS ++RQ++ AV+++H G+VHRDL
Sbjct: 89 YESPNHLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDL 146
Query: 500 KPENLL-FSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
KPENLL +S I + DFG + + K + + T C T Y APEVL Q Y + D
Sbjct: 147 KPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKP--YSKAVD 204
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
WS +GVI Y +LCG PF+ D++ + +I +
Sbjct: 205 CWS------------------------IGVIAYILLCGYPPFY----DENDSKLFEQILK 236
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ FD+ W +S AK+ ++L+ +P +R
Sbjct: 237 AEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR 268
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 2/61 (3%)
Query: 894 HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
H Y DRI +KG +TE +AS ++RQ++ AV+++H G+VHRDLKPENL
Sbjct: 94 HLYLVMQLVSGGELFDRIVEKGF--YTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL 151
Query: 954 L 954
L
Sbjct: 152 L 152
Score = 33.1 bits (74), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 263 YRRILKTE----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPF 312
+ +ILK E P +D+S DFI L+ KDP +R E+ RHP+
Sbjct: 231 FEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKR-----YTCEQAARHPW 279
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/297 (31%), Positives = 131/297 (44%), Gaps = 56/297 (18%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 418
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 15 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 419 -EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
+E+++LR GHPNI+ L ++ + D + +K +E E +
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRK 128
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFT 535
IMR L+ + +H +VHRDLKPEN+L D NIK+ DFGF+C E L C T
Sbjct: 129 IMRALLEVICALHKLNIVHRDLKPENILLDDDM--NIKLTDFGFSCQLDPGEKLREVCGT 186
Query: 536 LQYAAPEV----LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
Y APE+ + + GY + D+W S GVI+YT+
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMW------------------------STGVIMYTL 222
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
L G PF R + + ++ I G + F + W S K+L L V P +R
Sbjct: 223 LAGSPPFWHRKQ----MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKR 275
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 18/78 (23%)
Query: 110 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------------- 156
F+E Y+ ILG G SV RRC+ K T +EYAVKII S
Sbjct: 15 FYENYE----PKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 157 -EEINLLRACQGHPNICR 173
+E+++LR GHPNI +
Sbjct: 71 LKEVDILRKVSGHPNIIQ 88
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+ +E E +IMR L+ + +H +VHRDLKPEN+LL
Sbjct: 118 KVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 157
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 14/68 (20%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIISRKIDCS--------------EEINLLRACQGHPNI 211
+G ++ RRC+ K T +EYAVKII S +E+++LR GHPNI
Sbjct: 27 RGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNI 86
Query: 212 VNLHCVFQ 219
+ L ++
Sbjct: 87 IQLKDTYE 94
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 90/284 (31%), Positives = 139/284 (48%), Gaps = 55/284 (19%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI------------------DCSEEINLLRAC 427
LG G+Y C EK+ E A+K+I + + EI+LL++
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L VF+D+ + Y ++I + + F E +A+ IM+Q+++ +
Sbjct: 104 D-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILSGIC 160
Query: 488 FMHSRGVVHRDLKPENLLFSDPAG-DNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVL 544
++H +VHRD+KPEN+L + NIK+VDFG + K L T Y APEVL
Sbjct: 161 YLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL 220
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
K Y+E CD+WS C GVI+Y +LCG PF ++
Sbjct: 221 ---KKKYNEKCDVWS-------------------C-----GVIMYILLCGYPPFGGQNDQ 253
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
D I+ ++++G++ FD W +S EAKEL K +LT + +R
Sbjct: 254 D----IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKR 293
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
R F E +A+ IM+Q+++ + ++H +VHRD+KPEN+LL
Sbjct: 140 RHKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILL 179
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 23/98 (23%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G+Y C EK+ E A+K+I + + +G + + +EK +
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKS----------QFDKGRYSDDNKNIEKFHEEI 93
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
Y EI+LL++ HPNI+ L VF+D+
Sbjct: 94 Y------------NEISLLKSLD-HPNIIKLFDVFEDK 118
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 127/271 (46%), Gaps = 33/271 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K + E+ L P+IV + V+++
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 128
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS I + + A+ ++HS + HRD+K
Sbjct: 129 AGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVK 188
Query: 501 PENLLFSDPAGDNI-KVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PENLL++ + I K+ DFGFA SL TPC+T Y APEVL +K
Sbjct: 189 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEK--------- 239
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
YD++CD WSLGVI Y +LCG PF++ + RI+ G
Sbjct: 240 -----------------YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXG 282
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Q+ F WS VS E K L ++LL P QR
Sbjct: 283 QYEFPNPEWSEVSEEVKXLIRNLLKTEPTQR 313
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS I + + A+ ++HS + HRD+KPENLL + N I
Sbjct: 149 RIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 202
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 94/274 (34%), Positives = 138/274 (50%), Gaps = 42/274 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLHCV 439
LG G++SV RRCV+K+ QEYA KII ++K+ + L R C+ HPNIV LH
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 98
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+E Y + I R ++E +AS + Q++ +V+ +H +VHRDL
Sbjct: 99 ISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIHQILESVNHIHQHDIVHRDL 156
Query: 500 KPENLLFSDPA-GDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
KPENLL + G +K+ DFG A ++++ T Y +PEVLR+D Y +
Sbjct: 157 KPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDP--YGKPV 214
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+W + GVILY +L G PF D+ + +IK
Sbjct: 215 DIW------------------------ACGVILYILLVGYPPF----WDEDQHKLYQQIK 246
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
G ++F + W TV+ EAK L +LT+NPA+RI
Sbjct: 247 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI 280
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 6/56 (10%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNICR 173
LG G++SV RRCV+K+ QEYA KII ++K+ + L R C+ HPNI R
Sbjct: 39 LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVR 94
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS + Q++ +V+ +H +VHRDLKPENLLL S G +K+
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKL 174
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 6/62 (9%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLHCVFQ 219
+G ++ RRCV+K+ QEYA KII ++K+ + L R C+ HPNIV LH
Sbjct: 41 KGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSIS 100
Query: 220 DE 221
+E
Sbjct: 101 EE 102
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/271 (31%), Positives = 137/271 (50%), Gaps = 40/271 (14%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCV 439
+LG G++S ++ TG+ +A+K I R EI +L+ + H NIV L +
Sbjct: 16 VLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-HENIVTLEDI 74
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
++ H Y DRI ++G +TE +AS +++Q+++AV ++H G+VHRDL
Sbjct: 75 YESTTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHENGIVHRDL 132
Query: 500 KPENLLFSDPAGDN-IKVVDFGFACLKRES-LHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
KPENLL+ P ++ I + DFG + +++ + T C T Y APEVL Q Y + D
Sbjct: 133 KPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKP--YSKAVDC 190
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
W S+GVI Y +LCG PF+ +++ + +IKEG
Sbjct: 191 W------------------------SIGVITYILLCGYPPFY----EETESKLFEKIKEG 222
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
+ F++ W +S AK+ LL +P +R
Sbjct: 223 YYEFESPFWDDISESAKDFICHLLEKDPNER 253
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 892 NVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPE 951
H Y DRI ++G +TE +AS +++Q+++AV ++H G+VHRDLKPE
Sbjct: 78 TTHYYLVMQLVSGGELFDRILERGV--YTEKDASLVIQQVLSAVKYLHENGIVHRDLKPE 135
Query: 952 NLL 954
NLL
Sbjct: 136 NLL 138
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 146/310 (47%), Gaps = 52/310 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLHCV 439
+G G++SV RRCV+ TG EYA KII ++K+ + L R C+ H NIV LH
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+E Y + I R ++E +AS ++Q++ AV H GVVHRDL
Sbjct: 72 ISEEGFHYLVFDLVTGGELFEDI--VAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 129
Query: 500 KPENLLFSDPA-GDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
KPENLL + G +K+ DFG A +++ T Y +PEVLR K Y +
Sbjct: 130 KPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLR--KEAYGKPV 187
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+W + GVILY +L G PF D+ + +IK
Sbjct: 188 DIW------------------------ACGVILYILLVGYPPF----WDEDQHKLYQQIK 219
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEGFRLQDVT 675
G ++F + W TV+ EAK L +LT+NPA+RI H+A K + Q T
Sbjct: 220 AGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITA----------HEALKHPWVCQRST 269
Query: 676 SAKLAQRRKN 685
A + R++
Sbjct: 270 VASMMHRQET 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL-SGISGNLIKI 965
++E +AS ++Q++ AV H GVVHRDLKPENLLL S G +K+
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKL 147
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRK 152
+G G++SV RRCV+ TG EYA KII+ K
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTK 40
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 6/56 (10%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII-SRKIDCSEEINL---LRACQ--GHPNIVNLH 215
+G ++ RRCV+ TG EYA KII ++K+ + L R C+ H NIV LH
Sbjct: 14 KGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLH 69
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 133 bits (335), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 87/274 (31%), Positives = 134/274 (48%), Gaps = 42/274 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI------DCSEEINLLRACQGHPNIVNLHC 438
+LG G++S +K T + A+K I++K EI +L + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+++ H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 499 LKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
LKPENLL+ D+ I + DFG + ++ L T C T Y APEVL Q
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP------- 194
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
Y + D WS+GVI Y +LCG PF+ D++ + +I
Sbjct: 195 -------------------YSKAVDCWSIGVIAYILLCGYPPFY----DENDAKLFEQIL 231
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++ FD+ W +S AK+ + L+ +P +R
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 894 HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRDLKPENL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 954 L 954
L
Sbjct: 148 L 148
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 263 YRRILKTE----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
+ +ILK E P +D+S DFI L+ KDP +R E+ +HP+
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR-----FTCEQALQHPWI 276
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 42/274 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI------DCSEEINLLRACQGHPNIVNLHC 438
+LG G++S +K T + A+K I+++ EI +L + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+++ H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 499 LKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
LKPENLL+ D+ I + DFG + ++ L T C T Y APEVL Q
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ--------- 192
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
Y + D WS+GVI Y +LCG PF+ D++ + +I
Sbjct: 193 -----------------KPYSKAVDCWSIGVIAYILLCGYPPFY----DENDAKLFEQIL 231
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++ FD+ W +S AK+ + L+ +P +R
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 894 HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRDLKPENL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 954 L 954
L
Sbjct: 148 L 148
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 263 YRRILKTE----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPF 312
+ +ILK E P +D+S DFI L+ KDP +R E+ +HP+
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR-----FTCEQALQHPW 275
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 42/274 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI------DCSEEINLLRACQGHPNIVNLHC 438
+LG G++S +K T + A+K I+++ EI +L + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+++ H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 499 LKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
LKPENLL+ D+ I + DFG + ++ L T C T Y APEVL Q
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKP------- 194
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
Y + D WS+GVI Y +LCG PF+ D++ + +I
Sbjct: 195 -------------------YSKAVDCWSIGVIAYILLCGYPPFY----DENDAKLFEQIL 231
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++ FD+ W +S AK+ + L+ +P +R
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 894 HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRDLKPENL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 954 L 954
L
Sbjct: 148 L 148
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 9/55 (16%)
Query: 263 YRRILKTE----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
+ +ILK E P +D+S DFI L+ KDP +R E+ +HP+
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFT-----CEQALQHPWI 276
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 134/274 (48%), Gaps = 42/274 (15%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI------DCSEEINLLRACQGHPNIVNLHC 438
+LG G++S +K T + A+K I+++ EI +L + HPNIV L
Sbjct: 25 VLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDD 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+++ H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRD
Sbjct: 84 IYESGGHLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRD 141
Query: 499 LKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
LKPENLL+ D+ I + DFG + ++ L T C T Y APEVL Q
Sbjct: 142 LKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQ--------- 192
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
Y + D WS+GVI Y +LCG PF+ D++ + +I
Sbjct: 193 -----------------KPYSKAVDCWSIGVIAYILLCGYPPFY----DENDAKLFEQIL 231
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++ FD+ W +S AK+ + L+ +P +R
Sbjct: 232 KAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRF 265
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 894 HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
H Y DRI +KG +TE +ASR++ Q++ AV ++H G+VHRDLKPENL
Sbjct: 90 HLYLIMQLVSGGELFDRIVEKGF--YTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 954 L 954
L
Sbjct: 148 L 148
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 9/54 (16%)
Query: 263 YRRILKTE----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPF 312
+ +ILK E P +D+S DFI L+ KDP +R E+ +HP+
Sbjct: 227 FEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKR-----FTCEQALQHPW 275
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 91/300 (30%), Positives = 141/300 (47%), Gaps = 56/300 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNIVNLHCV 439
+LG+G+++ + C+ T QEYAVKII ++ E+ +L CQGH N++ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
F++E Y I ++ F E EAS +++ + +A+ F+H++G+ HRDL
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 500 KPENLLFSDPAGDN-IKVVDFGFAC----------LKRESLHTPCFTLQYAAPEVLR--- 545
KPEN+L P + +K+ DFG + L TPC + +Y APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
++ S YD+ CDLWS LGVILY +L G PF R D
Sbjct: 198 EEASIYDKRCDLWS------------------------LGVILYILLSGYPPFVGRCGSD 233
Query: 606 SALS-----------IMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
+ I+EG++ F + W+ +S AK+L LL + QR+ +V
Sbjct: 234 CGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
F E EAS +++ + +A+ F+H++G+ HRDLKPEN+L
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNI 171
+LG+G+++ + C+ T QEYAVKII ++ E+ +L CQGH N+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 175 CVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNI 211
C+ T QEYAVKII ++ E+ +L CQGH N+
Sbjct: 32 CINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 146/303 (48%), Gaps = 52/303 (17%)
Query: 364 DKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK--------- 414
+ ++ S+ + Y+M + LG G +++ R+C +K TG+EYA K I ++
Sbjct: 16 ENLYFQSMVEDHYEMGEE----LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGV 71
Query: 415 --IDCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTE 472
+ E+N+LR + HPNI+ LH +F+++ D + +K TE
Sbjct: 72 SREEIEREVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEK--ESLTE 128
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFA--CLKRES 528
+EA++ ++Q++ VH++HS+ + H DLKPEN++ D N IK++DFG A
Sbjct: 129 DEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNE 188
Query: 529 LHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
T ++ APE++ + G + D+W S+GVI
Sbjct: 189 FKNIFGTPEFVAPEIVNYEPLGLE--ADMW------------------------SIGVIT 222
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y +L G PF ++ ++ +I A ++FD E +S S AK+ + LL +P +R
Sbjct: 223 YILLSGASPFLGETKQETLTNISAV----NYDFDEEYFSNTSELAKDFIRRLLVKDPKRR 278
Query: 649 IRM 651
+ +
Sbjct: 279 MXI 281
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ R+C +K TG+EYA K I ++ R + R +E+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKR----------RLXSSRRGVSREEIER----- 78
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
E+N+LR + HPNI+ LH +F++
Sbjct: 79 --------------EVNILREIR-HPNIITLHDIFEN 100
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE+EA++ ++Q++ VH++HS+ + H DLKPEN++L
Sbjct: 126 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 162
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 140/281 (49%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSEEINLLRACQGHPNIV 434
LG G +++ R+C +K TG+EYA K I ++ + E+N+LR + HPNI+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR-HPNII 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH +F+++ D + +K TE+EA++ ++Q++ VH++HS+ +
Sbjct: 79 TLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRI 136
Query: 495 VHRDLKPENLLFSDPAGDN--IKVVDFGFAC-LKRESLHTPCF-TLQYAAPEVLRQDKSG 550
H DLKPEN++ D N IK++DFG A ++ + F T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++ +I
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGETKQETLTNI 230
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
A ++FD E +S S AK+ + LL +P +R+ +
Sbjct: 231 SAV----NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXI 267
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ R+C +K TG+EYA K I ++ R + R +E+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKR----------RLSSSRRGVSREEIER----- 64
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
E+N+LR + HPNI+ LH +F++
Sbjct: 65 --------------EVNILREIR-HPNIITLHDIFEN 86
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE+EA++ ++Q++ VH++HS+ + H DLKPEN++L
Sbjct: 112 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 148
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 127 bits (318), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 144/297 (48%), Gaps = 52/297 (17%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS-RKIDCSE--------- 419
S+ + Y+M + LG G +++ R+C +K TG+EYA K I R++ S
Sbjct: 1 SMVEDHYEMGEE----LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIE 56
Query: 420 -EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
E+N+LR + HPNI+ LH +F+++ D + +K TE+EA++
Sbjct: 57 REVNILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKE--SLTEDEATQF 113
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFA--CLKRESLHTPCF 534
++Q++ VH++HS+ + H DLKPEN++ D N IK++DFG A
Sbjct: 114 LKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFG 173
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCG 594
T ++ APE++ + G + D+W S+GVI Y +L G
Sbjct: 174 TPEFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYILLSG 207
Query: 595 RVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
PF ++ ++ +I A ++FD E +S S AK+ + LL +P +R+ +
Sbjct: 208 ASPFLGETKQETLTNISAV----NYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTI 260
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 34/113 (30%)
Query: 108 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 167
S+ + Y+M + LG G +++ R+C +K TG+EYA K I ++ R
Sbjct: 1 SMVEDHYEMGEE----LGSGQFAIVRKCRQKGTGKEYAAKFIKKR----------RLSSS 46
Query: 168 HPNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ R +E+ E+N+LR + HPNI+ LH +F++
Sbjct: 47 RRGVSREEIER-------------------EVNILREIR-HPNIITLHDIFEN 79
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 30/37 (81%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE+EA++ ++Q++ VH++HS+ + H DLKPEN++L
Sbjct: 105 LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIML 141
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 90/300 (30%), Positives = 140/300 (46%), Gaps = 56/300 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNIVNLHCV 439
+LG+G+++ + C+ T QEYAVKII ++ E+ +L CQGH N++ L
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEF 79
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
F++E Y I ++ F E EAS +++ + +A+ F+H++G+ HRDL
Sbjct: 80 FEEEDRFYLVFEKMRGGSILSHIHKRRH--FNELEASVVVQDVASALDFLHNKGIAHRDL 137
Query: 500 KPENLLFSDPAGDN-IKVVDFGFAC----------LKRESLHTPCFTLQYAAPEVLR--- 545
KPEN+L P + +K+ DF + L TPC + +Y APEV+
Sbjct: 138 KPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS 197
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
++ S YD+ CDLWS LGVILY +L G PF R D
Sbjct: 198 EEASIYDKRCDLWS------------------------LGVILYILLSGYPPFVGRCGSD 233
Query: 606 SALS-----------IMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
+ I+EG++ F + W+ +S AK+L LL + QR+ +V
Sbjct: 234 CGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQV 293
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
F E EAS +++ + +A+ F+H++G+ HRDLKPEN+L
Sbjct: 108 FNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNI 171
+LG+G+++ + C+ T QEYAVKII ++ E+ +L CQGH N+
Sbjct: 20 VLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 175 CVEKSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNI 211
C+ T QEYAVKII ++ E+ +L CQGH N+
Sbjct: 32 CINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNV 73
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 42/272 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHCVF 440
+G GS+ + V+K T A K I + +EI ++++ HPNI+ L+ F
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYETF 92
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+D Y +R+ K F E++A+RIM+ +++AV + H V HRDLK
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLNVAHRDLK 150
Query: 501 PENLLF-SDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PEN LF +D +K++DFG A + + + T T Y +P+VL + Y CD
Sbjct: 151 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL---EGLYGPECDE 207
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
W S GV++Y +LCG PF A + + +M +I+EG
Sbjct: 208 W------------------------SAGVMMYVLLCGYPPFSAPTDXE----VMLKIREG 239
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
F F + W VS +A+ L + LLT +P QRI
Sbjct: 240 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 271
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F E++A+RIM+ +++AV + H V HRDLKPEN L
Sbjct: 120 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 156
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 125 bits (314), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 131/272 (48%), Gaps = 42/272 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHCVF 440
+G GS+ + V+K T A K I + +EI ++++ HPNI+ L+ F
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYETF 75
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+D Y +R+ K F E++A+RIM+ +++AV + H V HRDLK
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRV--FRESDAARIMKDVLSAVAYCHKLNVAHRDLK 133
Query: 501 PENLLF-SDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
PEN LF +D +K++DFG A + + + T T Y +P+VL + Y CD
Sbjct: 134 PENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVL---EGLYGPECDE 190
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
W S GV++Y +LCG PF A + + +M +I+EG
Sbjct: 191 W------------------------SAGVMMYVLLCGYPPFSAPTDXE----VMLKIREG 222
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
F F + W VS +A+ L + LLT +P QRI
Sbjct: 223 TFTFPEKDWLNVSPQAESLIRRLLTKSPKQRI 254
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F E++A+RIM+ +++AV + H V HRDLKPEN L
Sbjct: 103 FRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLF 139
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 126/271 (46%), Gaps = 39/271 (14%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCSEEINLLRACQGHPNIVNLHCVF 440
LG G++ V RCVEK+TG+ + K I+ K EI+++ HP ++NLH F
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAF 117
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+D+ DRI + +E E MRQ + MH +VH D+K
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAED-YKMSEAEVINYMRQACEGLKHMHEHSIVHLDIK 176
Query: 501 PENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
PEN++ ++K++DFG A E + T ++AAPE++ ++ G+
Sbjct: 177 PENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGF------- 229
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
D+W++GV+ Y +L G PF DD L + +K
Sbjct: 230 -------------------YTDMWAIGVLGYVLLSGLSPFAG--EDD--LETLQNVKRCD 266
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ FD +A+S+VS EAK+ K+LL P +R+
Sbjct: 267 WEFDEDAFSSVSPEAKDFIKNLLQKEPRKRL 297
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 6/60 (10%)
Query: 167 GHPNICRRCVEKSTGQEYAVKIISR-----KIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
G + RCVEK+TG+ + K I+ K EI+++ HP ++NLH F+D+
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAFEDK 120
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 21/104 (20%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCSEEINLLRACQGHPNICR----- 173
LG G++ V RCVEK+TG+ + K I+ K EI+++ HP +
Sbjct: 59 LGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHDAF 117
Query: 174 -------RCVEKSTGQEYAVKIISR--KIDCSEEINLLR-ACQG 207
+E +G E +I + K+ +E IN +R AC+G
Sbjct: 118 EDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEG 161
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+E E MRQ + MH +VH D+KPEN++ + +KI
Sbjct: 146 MSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKI 192
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 13/82 (15%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISN 336
+SP+ DFI LL K+PR+R L + HP+ D +L T RIP+ KI
Sbjct: 277 VSPEAKDFIKNLLQKEPRKR-----LTVHDALEHPWLKG-DHSNL-TSRIPSSRYNKIRQ 329
Query: 337 ELDVSNFSDEFTKMIPADSPAI 358
++ ++D PA PAI
Sbjct: 330 KIK-EKYAD-----WPAPQPAI 345
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 124 bits (310), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 129/278 (46%), Gaps = 50/278 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS---RKIDCS----EEINLLRACQGHPNIVNLHC 438
LG G ++V R+C+ KSTGQEYA K + R DC EI +L + P ++NLH
Sbjct: 37 LGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHE 96
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
V+++ + +EN+ R+++Q++ V+++H +VH D
Sbjct: 97 VYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLD 156
Query: 499 LKPENLLFSD--PAGDNIKVVDFGF------ACLKRESLHTPCFTLQYAAPEVLRQDKSG 550
LKP+N+L S P GD IK+VDFG AC RE + TP +Y APE+L D
Sbjct: 157 LKPQNILLSSIYPLGD-IKIVDFGMSRKIGHACELREIMGTP----EYLAPEILNYDP-- 209
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
D+W++G+I Y +L PF ++ L+
Sbjct: 210 ------------------------ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLN- 244
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
I + ++ E +S+VS A + +SLL NP +R
Sbjct: 245 ---ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKR 279
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 30/39 (76%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGI 958
+EN+ R+++Q++ V+++H +VH DLKP+N+LLS I
Sbjct: 129 SENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI 167
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 9/77 (11%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKIIS---RKIDCS----EEINLLRACQGHPNIVNLHCVF 218
+G + R+C+ KSTGQEYA K + R DC EI +L + P ++NLH V+
Sbjct: 39 RGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY 98
Query: 219 QD--EVIDWDDFSRGIE 233
++ E+I +++ G E
Sbjct: 99 ENTSEIILILEYAAGGE 115
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 375 QYDMDLDKAGI---LGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRA 426
++D LD I LG G++ V R E++TG +A K + S K +EI +
Sbjct: 45 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV 104
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ HP +VNLH F+D+ +++ + +E+EA MRQ+ +
Sbjct: 105 LR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGL 162
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVL 544
MH VH DLKPEN++F+ + +K++DFG ++S+ T ++AAPEV
Sbjct: 163 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 222
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
GY D+WS+GV+ Y +L G PF + D
Sbjct: 223 EGKPVGY--------------------------YTDMWSVGVLSYILLSGLSPFGGENDD 256
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
++ + +K +N D A+S +S + K+ + LL +P R+ +
Sbjct: 257 ET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 299
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+E+EA MRQ+ + MH VH DLKPEN++ + N +K+
Sbjct: 146 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL 192
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 167 GHPNICRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
G + R E++TG +A K + S K +EI + + HP +VNLH F+D+
Sbjct: 62 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDD 120
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 119 bits (297), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 139/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P F APE++ + G + D+W S+GVI Y +
Sbjct: 181 PAFV----APEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 42/287 (14%)
Query: 375 QYDMDLDKAGI---LGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRA 426
++D LD I LG G++ V R E++TG +A K + S K +EI +
Sbjct: 151 KHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSV 210
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ HP +VNLH F+D+ +++ + +E+EA MRQ+ +
Sbjct: 211 LR-HPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGL 268
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVL 544
MH VH DLKPEN++F+ + +K++DFG ++S+ T ++AAPEV
Sbjct: 269 CHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVA 328
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
GY D+WS+GV+ Y +L G PF + D
Sbjct: 329 EGKPVGY--------------------------YTDMWSVGVLSYILLSGLSPFGGENDD 362
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
++ + +K +N D A+S +S + K+ + LL +P R+ +
Sbjct: 363 ET----LRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTI 405
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+E+EA MRQ+ + MH VH DLKPEN++ + N +K+
Sbjct: 252 MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKL 298
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 167 GHPNICRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
G + R E++TG +A K + S K +EI + + HP +VNLH F+D+
Sbjct: 168 GAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHDAFEDD 226
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 118 bits (296), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 119
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 180 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 209
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 210 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 32/112 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 50
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
RR V + D E+++L+ Q HPN++ LH V+++
Sbjct: 51 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYEN 84
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 62
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 63 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 119
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 120 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 179
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 180 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 209
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 210 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 265
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 3 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 50
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 51 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 85
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 110 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 146
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 118 bits (295), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEK--ESLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 32/112 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
RR V + D E+++L+ Q HPN++ LH V+++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYEN 85
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 117 bits (294), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 58/300 (19%)
Query: 373 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-----------IDCSE 419
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ D
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIER 63
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E+++L+ Q HPN++ LH V++++ D + +K TE EA+ +
Sbjct: 64 EVSILKEIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKE--SLTEEEATEFL 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSD--PAGDNIKVVDFG------FACLKRESLHT 531
+Q++ V+++HS + H DLKPEN++ D IK++DFG F + T
Sbjct: 121 KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGT 180
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
P ++ APE++ + G + D+W S+GVI Y +
Sbjct: 181 P----EFVAPEIVNYEPLGLE--ADMW------------------------SIGVITYIL 210
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
L G PF ++ ++ +A + + F+ E +S S+ AK+ + LL +P +R+ +
Sbjct: 211 LSGASPFLGDTKQET----LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTI 266
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 32/113 (28%)
Query: 111 FEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGH 168
F Q ++D D LG G ++V ++C EKSTG +YA K I ++ S
Sbjct: 4 FRQENVDDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKS------------ 51
Query: 169 PNICRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
RR V + D E+++L+ Q HPN++ LH V++++
Sbjct: 52 ---SRRGVSRE--------------DIEREVSILKEIQ-HPNVITLHEVYENK 86
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
TE EA+ ++Q++ V+++HS + H DLKPEN++L
Sbjct: 111 LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIML 147
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 55/282 (19%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLH 437
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I+ L+
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLY 70
Query: 438 CVFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V + DE+ D I Q+ + +E EA R +Q+++AV + H +V
Sbjct: 71 DVIKSKDEI---IMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIV 125
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDE 553
HRDLKPENLL + N+K+ DFG + + + L T C + YAAPEV+ SG
Sbjct: 126 HRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI----SG--- 176
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K D+WS GVILY MLC R+PF DD ++ ++ +
Sbjct: 177 ------------------KLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK 213
Query: 614 -IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
I G + +S A L K +L VNP RI + +
Sbjct: 214 NISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEI 251
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I Q+ + +E EA R +Q+++AV + H +VHRDLKPENLLL
Sbjct: 92 DYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 136
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNICR 173
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I +
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIK 68
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 11/55 (20%)
Query: 179 STGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLHCVF--QDEVI 223
+TGQ+ A+KII++K+ EI+ LR + HP+I+ L+ V +DE+I
Sbjct: 27 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEII 80
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 117 bits (293), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/282 (31%), Positives = 135/282 (47%), Gaps = 55/282 (19%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLH 437
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I+ L+
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLY 74
Query: 438 CVFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V + DE+ D I Q+ + +E EA R +Q+++AV + H +V
Sbjct: 75 DVIKSKDEI---IMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIV 129
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDE 553
HRDLKPENLL + N+K+ DFG + + + L T C + YAAPEV+ SG
Sbjct: 130 HRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI----SG--- 180
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K D+WS GVILY MLC R+PF DD ++ ++ +
Sbjct: 181 ------------------KLYAGPEVDVWSCGVILYVMLCRRLPF-----DDESIPVLFK 217
Query: 614 -IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
I G + +S A L K +L VNP RI + +
Sbjct: 218 NISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEI 255
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I Q+ + +E EA R +Q+++AV + H +VHRDLKPENLLL
Sbjct: 96 DYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 140
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNICR 173
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I +
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIK 72
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 11/55 (20%)
Query: 179 STGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLHCVF--QDEVI 223
+TGQ+ A+KII++K+ EI+ LR + HP+I+ L+ V +DE+I
Sbjct: 31 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEII 84
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 115 bits (287), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 134/281 (47%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-------SRKIDCSEEI----NLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I SR+ C EEI ++LR HPNI+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVL-HPNII 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ ++ +CR +E+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR----------QSRASRRGVCREEIER----- 64
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
E+++LR HPNI+ LH V+++
Sbjct: 65 --------------EVSILRQVL-HPNIITLHDVYEN 86
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 28/38 (73%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 283 DFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
DFI +LLVK+ R+R L +E RHP+ +D +R
Sbjct: 251 DFIRKLLVKETRKR-----LTIQEALRHPWITPVDTQQAMVRR 288
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 115 bits (287), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 131/285 (45%), Gaps = 56/285 (19%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS----------RKIDCSEEINLLRACQGHPNIV 434
++G G++SV RRC+ + TGQ++AVKI+ D E ++ + HP+IV
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIV 89
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEA--SRIMRQLVAAVHFMHSR 492
L + + Y I ++ GF +EA S MRQ++ A+ + H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES-------LHTPCFTLQYAAPEVL 544
++HRD+KPEN+L + +K+ DFG A ES + TP F APEV+
Sbjct: 150 NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPHFM----APEVV 205
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+++ G + D+W GVIL+ +L G +PF+
Sbjct: 206 KREPYG--------------------------KPVDVWGCGVILFILLSGCLPFYGTKE- 238
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +G++ + WS +S AK+L + +L ++PA+RI
Sbjct: 239 ----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 911 IRQKGRCGFTENEA--SRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I ++ GF +EA S MRQ++ A+ + H ++HRD+KPEN+LL+
Sbjct: 117 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLA 164
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 23/27 (85%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKII 149
++G G++SV RRC+ + TGQ++AVKI+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIV 57
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII 189
+G ++ RRC+ + TGQ++AVKI+
Sbjct: 34 KGAFSVVRRCINRETGQQFAVKIV 57
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 55/282 (19%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLH 437
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I+ L+
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLY 79
Query: 438 CVFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V + DE+ D I Q+ + +E EA R +Q+++AV + H +V
Sbjct: 80 DVIKSKDEI---IMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIV 134
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDE 553
HRDLKPENLL + N+K+ DFG + + + L T C + YAAPEV+ E
Sbjct: 135 HRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 192
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS C GVILY MLC R+PF DD ++ ++ +
Sbjct: 193 -VDVWS-------------------C-----GVILYVMLCRRLPF-----DDESIPVLFK 222
Query: 614 -IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
I G + +S A L K +L VNP RI + +
Sbjct: 223 NISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEI 260
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I Q+ + +E EA R +Q+++AV + H +VHRDLKPENLLL
Sbjct: 101 DYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 145
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNICR 173
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I +
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIK 77
Score = 30.0 bits (66), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 11/55 (20%)
Query: 179 STGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLHCVF--QDEVI 223
+TGQ+ A+KII++K+ EI+ LR + HP+I+ L+ V +DE+I
Sbjct: 36 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEII 89
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 113 bits (283), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/282 (31%), Positives = 134/282 (47%), Gaps = 55/282 (19%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLH 437
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I+ L+
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLY 80
Query: 438 CVFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V + DE+ D I Q+ + +E EA R +Q+++AV + H +V
Sbjct: 81 DVIKSKDEI---IMVIEYAGNELFDYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIV 135
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDE 553
HRDLKPENLL + N+K+ DFG + + + L T C + YAAPEV+ E
Sbjct: 136 HRDLKPENLLLDEHL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPE 193
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS C GVILY MLC R+PF DD ++ ++ +
Sbjct: 194 -VDVWS-------------------C-----GVILYVMLCRRLPF-----DDESIPVLFK 223
Query: 614 -IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
I G + +S A L K +L VNP RI + +
Sbjct: 224 NISNGVYTLP----KFLSPGAAGLIKRMLIVNPLNRISIHEI 261
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I Q+ + +E EA R +Q+++AV + H +VHRDLKPENLLL
Sbjct: 102 DYIVQRDK--MSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL 146
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 9/58 (15%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNICR 173
LG+GS+ + +TGQ+ A+KII++K+ EI+ LR + HP+I +
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIK 78
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 11/55 (20%)
Query: 179 STGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLHCVF--QDEVI 223
+TGQ+ A+KII++K+ EI+ LR + HP+I+ L+ V +DE+I
Sbjct: 37 TTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVIKSKDEII 90
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A+KIIS++ ++ EI +L+ HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 76
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 77 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 133
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 194 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 226
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 284
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 285 RKFQDLLS 292
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 158
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A+KIIS++ ++ EI +L+ HP
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 82
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 83 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 139
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 140 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 199
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 200 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 232
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 233 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 290
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 291 RKFQDLLS 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 128 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 164
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 113 bits (282), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A+KIIS++ ++ EI +L+ HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 76
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 77 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 133
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 194 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 226
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 284
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 285 RKFQDLLS 292
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 158
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 113 bits (282), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A+KIIS++ ++ EI +L+ HP
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 75
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 76 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 132
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 133 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 192
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 193 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 225
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 226 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 283
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 284 RKFQDLLS 291
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 121 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 157
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 112 bits (281), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/308 (29%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A+KIIS++ ++ EI +L+ HP
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 76
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 77 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 133
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 134 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 193
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 194 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 226
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 227 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 284
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 285 RKFQDLLS 292
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 122 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 158
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 112 bits (279), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 127/288 (44%), Gaps = 51/288 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQ-G 429
D +LG GS++ R TG E A+K+I +K E+ + CQ
Sbjct: 12 DFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI--HCQLK 69
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP+I+ L+ F+D + Y ++ + + F+ENEA M Q++ + ++
Sbjct: 70 HPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK-PFSENEARHFMHQIITGMLYL 128
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQ 546
HS G++HRDL NLL + NIK+ DFG A + E +T C T Y +PE+ +
Sbjct: 129 HSHGILHRDLTLSNLLLTRNM--NIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATR 186
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
G + D+WSLG + YT+L GR PF + ++
Sbjct: 187 SAHGLES--------------------------DVWSLGCMFYTLLIGRPPFDTDTVKNT 220
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ D E S +S EAK+L LL NPA R+ + V
Sbjct: 221 LNKVVLA--------DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSV 260
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
F+ENEA M Q++ + ++HS G++HRDL NLLL+
Sbjct: 109 FSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT 146
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A++IIS++ ++ EI +L+ HP
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 201
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 202 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 258
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 318
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 319 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 351
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 352 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 409
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 410 RKFQDLLS 417
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 247 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 283
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 121/272 (44%), Gaps = 54/272 (19%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDEV 444
+LG G + K T +++A+K++ E+ L P+IV + V+++
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLY 84
Query: 445 H----TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+K
Sbjct: 85 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 144
Query: 501 PENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSG--YDENCDL 557
PENLL++ + I K+ DFGFA ++ +G YD++CD+
Sbjct: 145 PENLLYTSKRPNAILKLTDFGFA-----------------------KETTGEKYDKSCDM 181
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
W SLGVI+Y +LCG PF++ + + RI+ G
Sbjct: 182 W------------------------SLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMG 217
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
Q+ F WS VS E K L ++LL P QR+
Sbjct: 218 QYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRM 249
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
RI+ +G FTE EAS IM+ + A+ ++HS + HRD+KPENLL + N I
Sbjct: 105 RIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAI 158
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 138/308 (44%), Gaps = 50/308 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------------IDCSEEINLLRACQGHPN 432
LG G+ + E+ T ++ A++IIS++ ++ EI +L+ HP
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLN-HPC 215
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
I+ + F E + Y D++ R E Q++ AV ++H
Sbjct: 216 IIKIKNFFDAEDY-YIVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHEN 272
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQ-DK 548
G++HRDLKPEN+L S D IK+ DFG + + E+ + T C T Y APEVL
Sbjct: 273 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGT 332
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+GY+ D WS LGVIL+ L G PF S + +
Sbjct: 333 AGYNRAVDCWS------------------------LGVILFICLSGYPPF---SEHRTQV 365
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S+ +I G++NF E W+ VS +A +L K LL V+P + R + H + Q +
Sbjct: 366 SLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDP--KARFTTEEALRHPWLQDEDMK 423
Query: 669 FRLQDVTS 676
+ QD+ S
Sbjct: 424 RKFQDLLS 431
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGN-LIKI 965
Q++ AV ++H G++HRDLKPEN+LLS + LIKI
Sbjct: 261 QMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKI 297
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 110 bits (275), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 272
Query: 669 FRLQDVTSAKLAQ 681
+ VTS +++
Sbjct: 273 AKRPRVTSGGVSE 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 110 bits (275), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTSAKLAQ 681
+ VTS +++
Sbjct: 272 AKRPRVTSGGVSE 284
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 272
Query: 669 FRLQDVTSAKLAQ 681
+ VTS +++
Sbjct: 273 AKRPRVTSGGVSE 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 272
Query: 669 FRLQDVTSAKLAQ 681
+ VTS +++
Sbjct: 273 AKRPRVTSGGVSE 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 136/313 (43%), Gaps = 45/313 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 272
Query: 669 FRLQDVTSAKLAQ 681
+ VTS +++
Sbjct: 273 AKRPRVTSGGVSE 285
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 110 bits (274), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 49/80 (61%), Positives = 62/80 (77%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
RRILK+EPP P+++S D I RLL+KDP++RLG G DA+E+K H FF I+WDDLA
Sbjct: 276 RRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKINWDDLAA 335
Query: 324 KRIPAPFVPKISNELDVSNF 343
K++PAPF P I +ELDVSNF
Sbjct: 336 KKVPAPFKPVIRDELDVSNF 355
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 128/281 (45%), Gaps = 48/281 (17%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKI-----ISRKIDCSEEINLLRACQGH----PN 432
+LG G+Y + R+ TG+ YA+K+ I +K +E R H P
Sbjct: 61 VLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPF 120
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V LH FQ E + + Q+ R FTE+E + ++V A+ +H
Sbjct: 121 LVTLHYAFQTETKLHLILDYINGGELFTHLSQRER--FTEHEVQIYVGEIVLALEHLHKL 178
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQDK 548
G+++RD+K EN+L D G ++ + DFG F + E + C T++Y AP+++R
Sbjct: 179 GIIYRDIKLENILL-DSNG-HVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGD 236
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
SG+D+ D W SLGV++Y +L G PF +S
Sbjct: 237 SGHDKAVDWW------------------------SLGVLMYELLTGASPFTVDGEKNSQA 272
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I RI + + + E +S+ AK+L + LL +P +R+
Sbjct: 273 EISRRILKSEPPYPQE----MSALAKDLIQRLLMKDPKKRL 309
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE+E + ++V A+ +H G+++RD+K EN+LL
Sbjct: 156 FTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILL 192
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 124/287 (43%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + A H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 260
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 5/62 (8%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 171
D D LG+G+Y + V + T + AVKI+ R +DC E I + A H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENV 67
Query: 172 CR 173
+
Sbjct: 68 VK 69
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 133/308 (43%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEI 159
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI 51
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 144/303 (47%), Gaps = 60/303 (19%)
Query: 360 PPNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE 419
P ++D++ K ++E ++ +G G ++ + TG+ A+KI+ + S+
Sbjct: 2 PKDYDELLK---YYELHE-------TIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSD 51
Query: 420 ------EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTEN 473
EI L+ + H +I L+ V + + D I + R +E
Sbjct: 52 LPRIKTEIEALKNLR-HQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEE 108
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES----- 528
E + RQ+V+AV ++HS+G HRDLKPENLLF + +K++DFG C K +
Sbjct: 109 ETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEY--HKLKLIDFGL-CAKPKGNKDYH 165
Query: 529 LHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
L T C +L YAAPE++ Q KS D+W S+G++L
Sbjct: 166 LQTCCGSLAYAAPELI-QGKSYLGSEADVW------------------------SMGILL 200
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y ++CG +PF DD+ +++ +I G+ +D W + SS L + +L V+P +R
Sbjct: 201 YVLMCGFLPF----DDDNVMALYKKIMRGK--YDVPKWLSPSSIL--LLQQMLQVDPKKR 252
Query: 649 IRM 651
I M
Sbjct: 253 ISM 255
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E E + RQ+V+AV ++HS+G HRDLKPENLL
Sbjct: 105 LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLF 141
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----------DCSEEINLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I ++ + E+++LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ RR V +
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR---------------QSRASRRGVSRE---- 60
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ E+++LR H N++ LH V+++
Sbjct: 61 ----------EIEREVSILRQVL-HHNVITLHDVYEN 86
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 283 DFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
DFI +LLVK+ R+R L +E RHP+ +D +R
Sbjct: 251 DFIRKLLVKETRKR-----LTIQEALRHPWITPVDNQQAMVRR 288
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (271), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----------DCSEEINLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I ++ + E+++LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ RR V +
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR---------------QSRASRRGVSRE---- 60
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ E+++LR H N++ LH V+++
Sbjct: 61 ----------EIEREVSILRQVL-HHNVITLHDVYEN 86
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 283 DFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
DFI +LLVK+ R+R L +E RHP+ +D +R
Sbjct: 251 DFIRKLLVKETRKR-----LTIQEALRHPWITPVDNQQAMVRR 288
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----------DCSEEINLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I ++ + E+++LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTI 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ RR V +
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR---------------QSRASRRGVSRE---- 60
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ E+++LR H N++ LH V+++
Sbjct: 61 ----------EIEREVSILRQVL-HHNVITLHDVYEN 86
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 133/308 (43%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 65
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 66 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 123
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 124 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 179
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 180 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 216
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 217 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 270
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 271 AKRPRVTS 278
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 99 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 136
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 6 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 54
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 55 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 87
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 133/308 (43%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----------DCSEEINLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I ++ + E+++LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ RR V +
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR---------------QSRASRRGVSRE---- 60
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ E+++LR H N++ LH V+++
Sbjct: 61 ----------EIEREVSILRQVL-HHNVITLHDVYEN 86
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 283 DFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
DFI +LLVK+ R+R L +E RHP+ +D +R
Sbjct: 251 DFIRKLLVKETRKR-----LTIQEALRHPWITPVDNQQAMVRR 288
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 108 bits (269), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 131/281 (46%), Gaps = 48/281 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----------DCSEEINLLRACQGHPNIV 434
LG G +++ ++C EKSTG EYA K I ++ + E+++LR H N++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL-HHNVI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH V+++ D + QK +E EA+ ++Q++ V+++H++ +
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 495 VHRDLKPENLLFSDP--AGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSG 550
H DLKPEN++ D +IK++DFG A + + T ++ APE++ + G
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLG 196
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ D+W S+GVI Y +L G PF ++ ++
Sbjct: 197 LE--ADMW------------------------SIGVITYILLSGASPFLGDTKQET---- 226
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRM 651
+A I ++FD E +S S AK+ + LL +R+ +
Sbjct: 227 LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTI 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 28/37 (75%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E EA+ ++Q++ V+++H++ + H DLKPEN++L
Sbjct: 112 LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIML 148
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 30/97 (30%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCVEKSTGQE 183
LG G +++ ++C EKSTG EYA K I ++ RR V +
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKR---------------QSRASRRGVSRE---- 60
Query: 184 YAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQD 220
+ E+++LR H N++ LH V+++
Sbjct: 61 ----------EIEREVSILRQVL-HHNVITLHDVYEN 86
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 107 bits (268), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 260
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 259
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 131/278 (47%), Gaps = 52/278 (18%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHPNIV 434
+LG GS+ + R+ +G YA+K++ + ++ E ++L A HP +V
Sbjct: 35 VLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDIL-ADVNHPFVV 93
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH FQ E Y R+ ++ FTE + + +L + +HS G+
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALGLDHLHSLGI 151
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDKSGY 551
++RDLKPEN+L + +IK+ DFG A + ++ C T++Y APEV+ ++ G+
Sbjct: 152 IYRDLKPENILLDEEG--HIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVV--NRQGH 207
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIM 611
+ D W S GV+++ ML G +PF + R ++ ++++
Sbjct: 208 SHSADWW------------------------SYGVLMFEMLTGSLPFQGKDRKET-MTLI 242
Query: 612 ARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ K G F +S+EA+ L ++L NPA R+
Sbjct: 243 LKAKLGMPQF-------LSTEAQSLLRALFKRNPANRL 273
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 266 ILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
ILK + +P+ LS + + L ++P RLG G AEE+KRH F++ IDW+ L +
Sbjct: 242 ILKAKLGMPQFLSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRRE 301
Query: 326 IPAPFVPKISNELDVSNF 343
I PF P ++ D F
Sbjct: 302 IKPPFKPAVAQPDDTFYF 319
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE + + +L + +HS G+++RDLKPEN+LL
Sbjct: 127 FTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL 163
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 107 bits (267), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 259
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 259
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 259
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 123/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 260
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 56
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 57 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 89
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----------KEI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 105 bits (263), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 127/285 (44%), Gaps = 56/285 (19%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS----------RKIDCSEEINLLRACQGHPNIV 434
++G G +SV RRC+ + TGQ++AVKI+ D E ++ + HP+IV
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIV 89
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENE--ASRIMRQLVAAVHFMHSR 492
L + + Y I ++ GF +E AS MRQ++ A+ + H
Sbjct: 90 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES-------LHTPCFTLQYAAPEVL 544
++HRD+KP +L + +K+ FG A ES + TP F APEV+
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM----APEVV 205
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+++ G + D+W GVIL+ +L G +PF+
Sbjct: 206 KREPYG--------------------------KPVDVWGCGVILFILLSGCLPFYGTKE- 238
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +G++ + WS +S AK+L + +L ++PA+RI
Sbjct: 239 ----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 279
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKII 149
++G G +SV RRC+ + TGQ++AVKI+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIV 57
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 911 IRQKGRCGFTENEA--SRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I ++ GF +EA S MRQ++ A+ + H ++HRD+KP +LL+
Sbjct: 117 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 164
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII 189
+G ++ RRC+ + TGQ++AVKI+
Sbjct: 34 KGPFSVVRRCINRETGQQFAVKIV 57
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L T C + YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 102 DYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 126/272 (46%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L T C + YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 102 DYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 33.1 bits (74), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEI 159
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI 51
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 105 bits (261), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+ + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ C TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 36/93 (38%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+ + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKK-----------EI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 124/281 (44%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 181
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + + T C T +Y APE++ GY+
Sbjct: 182 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGATWTLCGTPEYLAPEIILS--KGYN 237
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 238 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 269
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 270 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 306
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 268 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 327
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 328 QRKVEAPFIPKFKGPGDTSNFDD 350
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 153 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 132/308 (42%), Gaps = 45/308 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFHQAQKEG 668
S K+ N W + S L +L NP+ RI + +K +++ K+G
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIKKD-RWYNKPLKKG 271
Query: 669 FRLQDVTS 676
+ VTS
Sbjct: 272 AKRPRVTS 279
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----------KEI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 104 bits (260), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 126/272 (46%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AV+II + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L T C + YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 102 DYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 137/328 (41%), Gaps = 90/328 (27%)
Query: 384 GILGDGSYSVCRRCVEKSTGQEYAVKIIS----RKID------CSEEINLLRACQGHPNI 433
G +G GSY V R +E T A+KI++ R+I+ E+ L++ HPNI
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNI 90
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIR-----QKGRC-------------------- 468
L+ V++DE + D++ G+C
Sbjct: 91 ARLYEVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAI 150
Query: 469 -----GFTENE--------ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIK 515
GF E+ S IMRQ+ +A+H++H++G+ HRD+KPEN LFS IK
Sbjct: 151 NGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIK 210
Query: 516 VVDFGFACLKRE----------SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILV 565
+VDFG L +E + T T + APEVL Y CD W
Sbjct: 211 LVDFG---LSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW------- 260
Query: 566 NVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEA 625
S GV+L+ +L G VPF + D+ ++++ + F+
Sbjct: 261 -----------------SAGVLLHLLLMGAVPFPGVNDADT----ISQVLNKKLCFENPN 299
Query: 626 WSTVSSEAKELTKSLLTVNPAQRIRMMR 653
++ +S A++L +LL N +R MR
Sbjct: 300 YNVLSPLARDLLSNLLNRNVDERFDAMR 327
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E S IMRQ+ +A+H++H++G+ HRD+KPEN L S
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFS 202
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 11/62 (17%)
Query: 122 GILGDGSYSVCRRCVEKSTGQEYAVKIIS----RKID------CSEEINLLRACQGHPNI 171
G +G GSY V R +E T A+KI++ R+I+ E+ L++ HPNI
Sbjct: 32 GAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLH-HPNI 90
Query: 172 CR 173
R
Sbjct: 91 AR 92
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENV 67
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 68 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ TL Y APE+L++
Sbjct: 126 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR-- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 182 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 219 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 260
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 101 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 138
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEI 159
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 8 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENI 52
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 104 bits (259), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 133/275 (48%), Gaps = 46/275 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR------KIDCSEEINLLRACQGHPNIVNLHCV 439
LG G++ E+S+G E +K I++ EI +L++ HPNI+ + V
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD-HPNIIKIFEV 88
Query: 440 FQDEVHTYXXXXXXXXXXXXDRI---RQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
F+D + Y +RI + +G+ +E + +M+Q++ A+ + HS+ VVH
Sbjct: 89 FEDYHNMYIVMETCEGGELLERIVSAQARGK-ALSEGYVAELMKQMMNALAYFHSQHVVH 147
Query: 497 RDLKPENLLFSDPAGDN-IKVVDFGFACLKRESLHT--PCFTLQYAAPEVLRQDKSGYDE 553
+DLKPEN+LF D + + IK++DFG A L + H+ T Y APEV ++D +
Sbjct: 148 KDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTF--- 204
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
CD+W S GV++Y +L G +PF S ++ + A
Sbjct: 205 KCDIW------------------------SAGVVMYFLLTGCLPFTGTSLEE--VQQKAT 238
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
KE + + ++ +A +L K +LT +P +R
Sbjct: 239 YKEPNYAVECRP---LTPQAVDLLKQMLTKDPERR 270
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
+E + +M+Q++ A+ + HS+ VVH+DLKPEN+L S
Sbjct: 120 ALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTS 161
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 49/280 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNLH 437
LG+GS+ + T Q+ A+K ISR++ EI+ L+ + HP+I+ L+
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLR-HPHIIKLY 75
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
V D I +K R TE+E R +Q++ A+ + H +VHR
Sbjct: 76 DVITTPTDI-VMVIEYAGGELFDYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVHR 132
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
DLKPENLL D N+K+ DFG + + + L T C + YAAPEV+ N
Sbjct: 133 DLKPENLLLDDNL--NVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVI---------NG 181
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
L++ D+WS G++LY ML GR+PF D+ ++ ++
Sbjct: 182 KLYA----------------GPEVDVWSCGIVLYVMLVGRLPFD----DEFIPNLFKKVN 221
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
+ +S A+ L + ++ +P QRI + ++
Sbjct: 222 SCVYVMP----DFLSPGAQSLIRRMIVADPMQRITIQEIR 257
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I +K R TE+E R +Q++ A+ + H +VHRDLKPENLLL
Sbjct: 97 DYIVEKKR--MTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLL 141
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 5/43 (11%)
Query: 273 IPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNV 315
+P+ LSP I R++V DP +R + +E++R P+FNV
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQR-----ITIQEIRRDPWFNV 264
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 124/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L C YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 102 DYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 103 bits (257), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/287 (28%), Positives = 122/287 (42%), Gaps = 44/287 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEIN---LLRACQGHPNI 433
D D LG+G+Y + V + T + AVKI+ R +DC E I + H N+
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENV 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V + ++ Y DRI G E +A R QL+A V ++H G
Sbjct: 67 VKFYGHRREGNIQYLFLEYCSGGELFDRIEPD--IGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-----LHTPCFTLQYAAPEVLRQDK 548
+ HRD+KPENLL + DN+K+ DFG A + R + L+ TL Y APE+L++
Sbjct: 125 ITHRDIKPENLLLDE--RDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKR-- 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + E D+WS G++L ML G +P+ S
Sbjct: 181 -----------------------REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEY 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
S K+ N W + S L +L NP+ RI + +K
Sbjct: 218 SDWKE-KKTYLN----PWKKIDSAPLALLHKILVENPSARITIPDIK 259
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
G E +A R QL+A V ++H G+ HRD+KPENLLL
Sbjct: 100 GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL 137
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 13/93 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQGHPNICRR 174
D D LG+G+Y + V + T + AVKI+ R +DC E I
Sbjct: 7 DWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIK-----------KEI 55
Query: 175 CVEKSTGQEYAVKIISRKIDCSEEINLLRACQG 207
C+ K E VK + + + + L C G
Sbjct: 56 CINKMLNHENVVKFYGHRREGNIQYLFLEYCSG 88
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 60/282 (21%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHPNIV 434
+LG GS+ + ++ Q YA+K++ + ++ E ++L HP IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIV 89
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH FQ E Y R+ ++ FTE + + +L A+ +HS G+
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL------HTPCFTLQYAAPEVLRQDK 548
++RDLKPEN+L + +IK+ DFG L +ES+ ++ C T++Y APEV+ ++
Sbjct: 148 IYRDLKPENILLDEEG--HIKLTDFG---LSKESIDHEKKAYSFCGTVEYMAPEVV--NR 200
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
G+ ++ D W S GV+++ ML G +PF + R ++
Sbjct: 201 RGHTQSADWW------------------------SFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 609 SIM-ARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ A++ QF +S EA+ L + L NPA R+
Sbjct: 237 MILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRL 269
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 45/87 (51%)
Query: 266 ILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
ILK + +P+ LSP+ + L ++P RLG G EE+KRH FF+ IDW+ L +
Sbjct: 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 326 IPAPFVPKISNELDVSNFSDEFTKMIP 352
I PF P D F EFT P
Sbjct: 298 IHPPFKPATGRPEDTFYFDPEFTAKTP 324
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE + + +L A+ +HS G+++RDLKPEN+LL
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 121
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ T C T +Y APEV
Sbjct: 122 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 179
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 180 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 211
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 212 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 251
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 9 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 68
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 128
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 129 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 185
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 186 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 242
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 243 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 302
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 303 ----AQSITITPPD 312
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 105 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 141
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 118
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ T C T +Y APEV
Sbjct: 119 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 177 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 208
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 209 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 248
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 126 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 299
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 300 ----AQSITITPPD 309
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 130/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 118
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ T C T +Y APEV
Sbjct: 119 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKTFCGTPEYLAPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 177 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 208
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 209 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 248
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 126 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDY 182
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 299
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 300 ----AQSITITPPD 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 60/282 (21%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHPNIV 434
+LG GS+ + ++ Q YA+K++ + ++ E ++L HP IV
Sbjct: 31 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIV 89
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH FQ E Y R+ ++ FTE + + +L A+ +HS G+
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL------HTPCFTLQYAAPEVLRQDK 548
++RDLKPEN+L + +IK+ DFG L +ES+ ++ C T++Y APEV+ ++
Sbjct: 148 IYRDLKPENILLDEEG--HIKLTDFG---LSKESIDHEKKAYSFCGTVEYMAPEVV--NR 200
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
G+ ++ D W S GV+++ ML G +PF + R ++
Sbjct: 201 RGHTQSADWW------------------------SFGVLMFEMLTGTLPFQGKDRKETMT 236
Query: 609 SIM-ARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ A++ QF +S EA+ L + L NPA R+
Sbjct: 237 MILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRL 269
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 266 ILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
ILK + +P+ LSP+ + L ++P RLG G EE+KRH FF+ IDW+ L +
Sbjct: 238 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 297
Query: 326 IPAPFVP 332
I PF P
Sbjct: 298 IHPPFKP 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE + + +L A+ +HS G+++RDLKPEN+LL
Sbjct: 123 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 159
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 102 bits (255), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 60/282 (21%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHPNIV 434
+LG GS+ + ++ Q YA+K++ + ++ E ++L HP IV
Sbjct: 32 VLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVN-HPFIV 90
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
LH FQ E Y R+ ++ FTE + + +L A+ +HS G+
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGI 148
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL------HTPCFTLQYAAPEVLRQDK 548
++RDLKPEN+L + +IK+ DFG L +ES+ ++ C T++Y APEV+ ++
Sbjct: 149 IYRDLKPENILLDEEG--HIKLTDFG---LSKESIDHEKKAYSFCGTVEYMAPEVV--NR 201
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
G+ ++ D W S GV+++ ML G +PF + R ++
Sbjct: 202 RGHTQSADWW------------------------SFGVLMFEMLTGTLPFQGKDRKETMT 237
Query: 609 SIM-ARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ A++ QF +S EA+ L + L NPA R+
Sbjct: 238 MILKAKLGMPQF---------LSPEAQSLLRMLFKRNPANRL 270
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 39/67 (58%)
Query: 266 ILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKR 325
ILK + +P+ LSP+ + L ++P RLG G EE+KRH FF+ IDW+ L +
Sbjct: 239 ILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRRE 298
Query: 326 IPAPFVP 332
I PF P
Sbjct: 299 IHPPFKP 305
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE + + +L A+ +HS G+++RDLKPEN+LL
Sbjct: 124 FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL 160
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 102 bits (255), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 124/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGRX--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L C YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YXSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 112 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 102 bits (255), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 125/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ S L R + HPNIV L V
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + G E EA RQ+V+AV + H + +VHRDL
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHG--WMKEKEARAKFRQIVSAVQYCHQKFIVHRDL 132
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L T C + YAAPE+ + K YD D
Sbjct: 133 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKK--YDGPEVD 188
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 189 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 220
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 221 GKYRIPF----YMSTDCENLLKKFLILNPSKR 248
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 105 EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 139
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 128/285 (44%), Gaps = 56/285 (19%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS----------RKIDCSEEINLLRACQGHPNIV 434
++G G +SV RRC+ + TGQ++AVKI+ D E ++ + HP+IV
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLK-HPHIV 91
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENE--ASRIMRQLVAAVHFMHSR 492
L + + Y I ++ GF +E AS MRQ++ A+ + H
Sbjct: 92 ELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 493 GVVHRDLKPENLLFSDPAGDN-IKVVDFGFACLKRES-------LHTPCFTLQYAAPEVL 544
++HRD+KP +L + +K+ FG A ES + TP F APEV+
Sbjct: 152 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFM----APEVV 207
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+++ Y + D+W C GVIL+ +L G +PF+
Sbjct: 208 KREP--YGKPVDVW-------------------GC-----GVILFILLSGCLPFYGTKE- 240
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +G++ + WS +S AK+L + +L ++PA+RI
Sbjct: 241 ----RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERI 281
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVKII 149
++G G +SV RRC+ + TGQ++AVKI+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIV 59
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 911 IRQKGRCGFTENEA--SRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I ++ GF +EA S MRQ++ A+ + H ++HRD+KP +LL+
Sbjct: 119 IVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLA 166
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/24 (45%), Positives = 19/24 (79%)
Query: 166 QGHPNICRRCVEKSTGQEYAVKII 189
+G ++ RRC+ + TGQ++AVKI+
Sbjct: 36 KGPFSVVRRCINRETGQQFAVKIV 59
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AV+II + +++ S L R + HPNIV L V
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDL 139
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L C + YAAPE+ + K YD D
Sbjct: 140 KAENLLLD--ADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKK--YDGPEVD 195
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 196 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 227
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP++R
Sbjct: 228 GKYRIPF----YMSTDCENLLKKFLILNPSKR 255
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 102 DYLVAHGRM--KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL 146
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 125/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E A+KII + +++ + L R + HPNIV L V
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDL 137
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L T C + YAAPE+ + K YD D
Sbjct: 138 KAENLLLD--ADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKK--YDGPEVD 193
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 194 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 225
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP +R
Sbjct: 226 GKYRIPF----YMSTDCENLLKRFLVLNPIKR 253
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 110 EKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 144
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 102 bits (254), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 30 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 89
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 90 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 147
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL + I+V DFGFA + C T +Y APE++ GY+
Sbjct: 148 DLIYRDLKPENLLIDEQG--YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 203
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 204 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 235
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 236 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 272
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 234 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 293
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 294 QRKVEAPFIPKFKGPGDTSNFDD 316
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 119 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 161
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 44 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 281
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 39/83 (46%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLPNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SN D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNADD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYQMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DEPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 121/275 (44%), Gaps = 45/275 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK-------IDCSEEINLLRACQGHPNIVNLHC 438
LG GS+ K TG YA+KI+ ++ I+ + ++ P +V L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F+D + Y +R+ GR F+E A Q+V ++HS +++RD
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRD 167
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
LKPENLL D G IKV DFGFA + C T +Y APE++ GY++ D W
Sbjct: 168 LKPENLLI-DQQG-YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYNKAVDWW 223
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
+LGV++Y M G PF A D + I +I G+
Sbjct: 224 ------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYEKIVSGK 255
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
F S SS+ K+L ++LL V+ +R ++
Sbjct: 256 VRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FAEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 38 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 97
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 98 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 155
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 156 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 211
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 212 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 243
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 244 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 280
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 242 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 301
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 302 QRKVEAPFIPKFKGPGDTSNFDD 324
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 127 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 169
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 101 bits (251), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 118
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ C T +Y APEV
Sbjct: 119 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 177 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 208
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 209 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 248
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 126 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 299
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 300 ----AQSITIXPPD 309
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 88
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 89 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 146
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + T C T +Y APE++ GY+
Sbjct: 147 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS--KGYN 202
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 203 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 234
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 235 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 267
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 233 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIY 292
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 293 QRKVEAPFIPKFKGPGDTSNFDD 315
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 118 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 160
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 101 bits (251), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 118
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ C T +Y APEV
Sbjct: 119 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 177 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 208
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 209 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 248
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 126 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 299
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 300 ----AQSITITPPD 309
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 64 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 181
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 182 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 237
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 238 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 269
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 270 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 306
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 268 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 327
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 328 QRKVEAPFIPKFKGPGDTSNFDD 350
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 153 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 123
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ C T +Y APEV
Sbjct: 124 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 181
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 182 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 213
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 214 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 253
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 11 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 70
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 130
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 131 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 187
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 244
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 245 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 304
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 305 ----AQSITITPPD 314
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 107 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 143
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 153
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 154 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 209
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 210 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 241
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 242 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 274
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 240 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 299
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 300 QRKVEAPFIPKFKGPGDTSNFDD 322
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 125 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++ H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIXNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 129/286 (45%), Gaps = 58/286 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HP 431
D D +LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 432 NIVNLHCVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
+ L FQ V Y +R+ FTE A ++V+A+
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERV-------FTEERARFYGAEIVSAL 118
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEV 543
++HSR VV+RD+K ENL+ D G +IK+ DFG ++ C T +Y APEV
Sbjct: 119 EYLHSRDVVYRDIKLENLML-DKDG-HIKITDFGLCKEGISDGATMKXFCGTPEYLAPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L + + Y D W LGV++Y M+CGR+PF+ ++
Sbjct: 177 L--EDNDYGRAVDWW------------------------GLGVVMYEMMCGRLPFY--NQ 208
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
D L + ++E +F T+S EAK L LL +P QR+
Sbjct: 209 DHERLFELILMEEIRFP------RTLSPEAKSLLAGLLKKDPKQRL 248
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 121/314 (38%), Gaps = 78/314 (24%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE------------------ 158
D D +LG G++ EK+TG+ YA+KI+ +++ +++
Sbjct: 6 DFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHP 65
Query: 159 --INLLRACQGHPNIC-----------------RRCVEKSTGQEYAVKIIS--------- 190
L A Q H +C R + + Y +I+S
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRD 125
Query: 191 ---RKIDCSEEINLLRACQGHPNIVNLHC-------------------VFQDEVIDWDDF 228
R I NL+ GH I + EV++ +D+
Sbjct: 126 VVYRDIKLE---NLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDY 182
Query: 229 SRGIECVXXXXXXXXXXXXXXXXXXXXHDYYHIQYRRILKTEPPIPEDLSPDVADFISRL 288
R ++ H+ + IL E P LSP+ ++ L
Sbjct: 183 GRAVDWWGLGVVMYEMMCGRLPFYNQDHERL---FELILMEEIRFPRTLSPEAKSLLAGL 239
Query: 289 LVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVPKISNELDVSNFSDEFT 348
L KDP++RLGGG DA+E+ H FF I+W D+ K++ PF P++++E+D F DEFT
Sbjct: 240 LKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDDEFT 299
Query: 349 KMIPADSPAIVPPN 362
A S I PP+
Sbjct: 300 ----AQSITITPPD 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
FTE A ++V+A+ ++HSR VV+RD+K ENL+L
Sbjct: 102 FTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLML 138
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + T C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 100 bits (250), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 123
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 124 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 181
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 182 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 237
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 238 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 269
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 270 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 306
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 268 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 327
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 328 QRKVEAPFIPKFKGPGDTSNFDD 350
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 153 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 195
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 100 bits (249), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLII-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIIS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII 174
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 119/277 (42%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG YA+KI+ ++ +N R Q P
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 95
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 96 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 153
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 154 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 209
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 210 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 241
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 242 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 274
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 240 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 299
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 300 QRKVEAPFIPKFKGPGDTSNFDD 322
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 125 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 167
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 100 bits (248), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/272 (29%), Positives = 118/272 (43%), Gaps = 45/272 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVN 644
+I G+ F S SS+ K+L ++LL V+
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVD 276
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D + G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKAFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 91/310 (29%), Positives = 129/310 (41%), Gaps = 47/310 (15%)
Query: 354 DSPAIVPPNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR 413
D PA+ P I S ++Y++ D +G G++ V R +K + AVK I R
Sbjct: 2 DRPAVAGPMDLPIMHDS---DRYELVKD----IGAGNFGVARLMRDKQANELVAVKYIER 54
Query: 414 --KID--CSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
KID EI R+ + HPNIV V H +RI GR
Sbjct: 55 GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-- 111
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
F+E+EA +QL++ V + H+ V HRDLK EN L +K+ DFG++ K L
Sbjct: 112 FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFGYS--KASVL 169
Query: 530 H----TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
H + T Y APEVL K YD D+WS G
Sbjct: 170 HSQPKSAVGTPAYIAPEVLL--KKEYDGKV-----------------------ADVWSCG 204
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY ML G PF + + RI Q+ + +S E + L + +P
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADP 262
Query: 646 AQRIRMMRVK 655
A+RI + ++
Sbjct: 263 AKRISIPEIR 272
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + H+ V HRDLK EN LL G +KI
Sbjct: 104 ERICNAGR--FSEDEARFFFQQLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKI 158
Score = 29.3 bits (64), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 265 RILKTEPPIPE--DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
RIL + IP+ +SP+ ISR+ V DP +R+ E++ H +F
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS-----IPEIRNHEWF 277
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG +A+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y AP ++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG +A+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 123/272 (45%), Gaps = 47/272 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E A+KII + +++ + L R + HPNIV L V
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDL 140
Query: 500 KPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NCD 556
K ENLL A NIK+ DFGF+ L C YAAPE+ + K YD D
Sbjct: 141 KAENLLLD--ADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKK--YDGPEVD 196
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W SLGVILYT++ G +PF ++ + + R+
Sbjct: 197 VW------------------------SLGVILYTLVSGSLPFDGQNLKE----LRERVLR 228
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G++ +S++ + L K L +NP +R
Sbjct: 229 GKYRIPF----YMSTDCENLLKRFLVLNPIKR 256
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D + GR E EA RQ+V+AV + H + +VHRDLK ENLLL
Sbjct: 103 DYLVAHGR--MKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLL 147
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ K TG +A+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 99.4 bits (246), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 99.4 bits (246), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ +G GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ +G GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ +G GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIKVADFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 99.0 bits (245), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 286
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T + APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEALAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
D+ LG GS+ K +G YA+KI+ ++ +N R Q P
Sbjct: 43 FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLMI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF A +
Sbjct: 208 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPFRAGNEG- 240
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I A+I + +++F + + +A++L + LL ++ +R+
Sbjct: 241 ---LIFAKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDWDDL 321
+ +I+K E PE P D + +LLV D +RLG E++ LK HPFF + W++L
Sbjct: 243 FAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 322 ATKRIP 327
+ P
Sbjct: 303 HQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 123 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 104 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 133 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 175
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.8 bits (242), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 120/281 (42%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENLL D G I+V DFGFA + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLLI-DQQG-YIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENLL+
Sbjct: 132 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI 174
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ + +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFG A + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLMI-DQQG-YIKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 97.8 bits (242), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 133 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 94
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 152
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 153 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 211 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 240
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F A + +A++L + LL ++ +R+
Sbjct: 241 NEYLIFQKIIKLEYDFPAAFF----PKARDLVEKLLVLDATKRL 280
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E P P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 243 YLIFQKIIKLEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 302
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 303 ENLHQQTPP 311
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 126 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 169
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 74
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 75 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 107
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 120/278 (43%), Gaps = 40/278 (14%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR--KID--CSEEINLLRACQGHPNIVNLHCVFQ 441
+G G++ V R +K + + AVK I R KID EI R+ + HPNIV V
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLR-HPNIVRFKEVIL 84
Query: 442 DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKP 501
H +RI GR F+E+EA +QL++ V + H+ V HRDLK
Sbjct: 85 TPTHLAIVMEYASGGELFERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKL 142
Query: 502 ENLLFSDPAGDNIKVVDFGFACLKRESLH----TPCFTLQYAAPEVLRQDKSGYDENCDL 557
EN L +K+ DFG++ K LH + T Y APEVL
Sbjct: 143 ENTLLDGSPAPRLKICDFGYS--KSSVLHSQPKSTVGTPAYIAPEVL------------- 187
Query: 558 WSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEG 617
L+++ G + D+WS GV LY ML G PF + + RI
Sbjct: 188 ----------LKKEYDG--KVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNV 235
Query: 618 QFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
Q+ + +S E + L + +PA+RI + ++
Sbjct: 236 QYAI--PDYVHISPECRHLISRIFVADPAKRISIPEIR 271
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + H+ V HRDLK EN LL G +KI
Sbjct: 103 ERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 157
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 7/51 (13%)
Query: 265 RILKTEPPIPE--DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
RIL + IP+ +SP+ ISR+ V DP +R+ E++ H +F
Sbjct: 231 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS-----IPEIRNHEWF 276
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 116/276 (42%), Gaps = 49/276 (17%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCS-EEINLLRACQGHPNIVNL 436
+LG GS+ K TG YAVK++ + + +C+ E +L + HP + L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
C FQ + I++ R F E A ++++A+ F+H +G+++
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR--FDEARARFYAAEIISALMFLHDKGIIY 147
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK +N+L + K+ DFG + T C T Y APE+L++
Sbjct: 148 RDLKLDNVLLDHEG--HCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE------- 198
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
Y D W++GV+LY MLCG PF A + DD
Sbjct: 199 -------------------MLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDD-------- 231
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ E N + + + +A + KS +T NP R+
Sbjct: 232 LFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 47/98 (47%), Gaps = 7/98 (7%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLG----GGELDAEELKRHPFFNVIDW 318
+ IL E P L D + + K+P RLG GGE + RHPFF IDW
Sbjct: 233 FEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGE---HAILRHPFFKEIDW 289
Query: 319 DDLATKRIPAPFVPKISNELDVSNFSDEFTKMIPADSP 356
L ++I PF P+I + DVSNF +F K P P
Sbjct: 290 AQLNHRQIEPPFRPRIKSREDVSNFDPDFIKEEPVLXP 327
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F E A ++++A+ F+H +G+++RDLK +N+LL
Sbjct: 121 FDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLL 157
Score = 29.6 bits (65), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 8/50 (16%)
Query: 178 KSTGQEYAVKIISRKI-------DCS-EEINLLRACQGHPNIVNLHCVFQ 219
K TG YAVK++ + + +C+ E +L + HP + L C FQ
Sbjct: 45 KETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQ 94
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 76/227 (33%), Positives = 106/227 (46%), Gaps = 41/227 (18%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISR-KIDCSEEINLLRACQ-----GHPNIVNLHCV 439
+G G+++ + TG+E AVKII + +++ + L R + HPNIV L V
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ E Y D + GR E EA RQ+V+AV + H + +VHRDL
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGR--MKEKEARAKFRQIVSAVQYCHQKYIVHRDL 140
Query: 500 KPENLLFSDPAGD-NIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE-NC 555
K ENLL GD NIK+ DFGF+ L T C + YAAPE+ + K YD
Sbjct: 141 KAENLLLD---GDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKK--YDGPEV 195
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
D+W SLGVILYT++ G +PF ++
Sbjct: 196 DVW------------------------SLGVILYTLVSGSLPFDGQN 218
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 26/37 (70%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
E EA RQ+V+AV + H + +VHRDLK ENLLL G
Sbjct: 113 EKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG 149
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 59/281 (20%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPNIVNLH 437
+LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP + L
Sbjct: 155 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 214
Query: 438 CVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS- 491
FQ V Y +R+ F+E+ A ++V+A+ ++HS
Sbjct: 215 YSFQTHDRLCFVMEYANGGELFFHLSRERV-------FSEDRARFYGAEIVSALDYLHSE 267
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDK 548
+ VV+RDLK ENL+ D G +IK+ DFG ++ T C T +Y APEVL
Sbjct: 268 KNVVYRDLKLENLML-DKDG-HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---- 321
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + Y D W LGV++Y M+CGR+PF+ ++D L
Sbjct: 322 ----------------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL 357
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++E +F T+ EAK L LL +P QR+
Sbjct: 358 FELILMEEIRFP------RTLGPEAKSLLSGLLKKDPKQRL 392
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ IL E P L P+ +S LL KDP++RLGGG DA+E+ +H FF I W +
Sbjct: 358 FELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVY 417
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMI 351
K++ PF P++++E D F +EFT +
Sbjct: 418 EKKLSPPFKPQVTSETDTRYFDEEFTAQM 446
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHS-RGVVHRDLKPENLLL 955
F+E+ A ++V+A+ ++HS + VV+RDLK ENL+L
Sbjct: 245 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 282
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 117/277 (42%), Gaps = 45/277 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ +N R Q P
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPF 103
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ L F+D + Y +R+ GR F E A Q+V ++HS
Sbjct: 104 LTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FXEPHARFYAAQIVLTFEYLHSL 161
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G IKV DFGFA + C T +Y APE++ GY+
Sbjct: 162 DLIYRDLKPENLMI-DQQG-YIKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 217
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 218 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 249
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+I G+ F S SS+ K+L ++LL V+ +R
Sbjct: 250 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRF 282
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 248 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 307
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 308 QRKVEAPFIPKFKGPGDTSNFDD 330
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F E A Q+V ++HS +++RDLKPENL++
Sbjct: 133 LRRIGR--FXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 175
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 92
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ ++ T QY +PE+L
Sbjct: 151 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 209 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 238
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 239 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 278
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 241 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 300
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 301 ENLHQQTPP 309
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 124 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 167
Score = 32.7 bits (73), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 72
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 73 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 105
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 128/281 (45%), Gaps = 59/281 (20%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPNIVNLH 437
+LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP + L
Sbjct: 158 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 217
Query: 438 CVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS- 491
FQ V Y +R+ F+E+ A ++V+A+ ++HS
Sbjct: 218 YSFQTHDRLCFVMEYANGGELFFHLSRERV-------FSEDRARFYGAEIVSALDYLHSE 270
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDK 548
+ VV+RDLK ENL+ D G +IK+ DFG ++ T C T +Y APEVL
Sbjct: 271 KNVVYRDLKLENLML-DKDG-HIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVL---- 324
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + Y D W LGV++Y M+CGR+PF+ ++D L
Sbjct: 325 ----------------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL 360
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++E +F T+ EAK L LL +P QR+
Sbjct: 361 FELILMEEIRFP------RTLGPEAKSLLSGLLKKDPKQRL 395
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ IL E P L P+ +S LL KDP++RLGGG DA+E+ +H FF I W +
Sbjct: 361 FELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVY 420
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFT 348
K++ PF P++++E D F +EFT
Sbjct: 421 EKKLSPPFKPQVTSETDTRYFDEEFT 446
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHS-RGVVHRDLKPENLLL 955
F+E+ A ++V+A+ ++HS + VV+RDLK ENL+L
Sbjct: 248 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 285
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 133/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 88
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ ++ T QY +PE+L
Sbjct: 147 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 205 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 234
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 235 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 274
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 237 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 296
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 297 ENLHQQTPP 305
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 120 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 163
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK 152
D ILG+GS+S E +T +EYA+KI+ ++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKR 65
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 89
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 206 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 235
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 275
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 298 ENLHQQTPP 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 121 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 69
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 70 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 102
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 66
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 124
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 125 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 183 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 212
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 213 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 252
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 215 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 274
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 275 ENLHQQTPP 283
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 98 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 141
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 8 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 46
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 47 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 79
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 208 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 237
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 300 ENLHQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 123 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 96.7 bits (239), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 45/281 (16%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPN 432
++ LG GS+ TG YA+KI+ ++ + +N R Q P
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPF 102
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+V L F+D + Y +R+ GR F+E A Q+V ++HS
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGR--FSEPHARFYAAQIVLTFEYLHSL 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+++RDLKPENL+ D G I+V DFG A + C T +Y APE++ GY+
Sbjct: 161 DLIYRDLKPENLMI-DQQG-YIQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILS--KGYN 216
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
+ D W +LGV++Y M G PF A D + I
Sbjct: 217 KAVDWW------------------------ALGVLIYEMAAGYPPFFA----DQPIQIYE 248
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMR 653
+I G+ F S SS+ K+L ++LL V+ +R ++
Sbjct: 249 KIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNLK 285
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +I+ + P S D+ D + LL D +R G + ++K H +F DW +
Sbjct: 247 YEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIY 306
Query: 323 TKRIPAPFVPKISNELDVSNFSD 345
+++ APF+PK D SNF D
Sbjct: 307 QRKVEAPFIPKFKGPGDTSNFDD 329
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R+ GR F+E A Q+V ++HS +++RDLKPENL++
Sbjct: 132 LRRIGR--FSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI 174
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 89
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 206 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 235
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 275
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 298 ENLHQQTPP 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 121 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 69
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 70 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 102
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/310 (28%), Positives = 131/310 (42%), Gaps = 47/310 (15%)
Query: 354 DSPAIVPPNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR 413
D PA+ P I S ++Y++ D +G G++ V R +K + + AVK I R
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKD----IGSGNFGVARLMRDKQSNELVAVKYIER 54
Query: 414 ----KIDCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
+ EI R+ + HPNIV V H +RI GR
Sbjct: 55 GEKIAANVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-- 111
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
F+E+EA +QL++ V + H+ V HRDLK EN L +K+ DFG++ K L
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFGYS--KSSVL 169
Query: 530 H----TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
H + T Y APEVL L+++ G + D+WS G
Sbjct: 170 HSQPKSTVGTPAYIAPEVL-----------------------LKKEYDG--KVADVWSCG 204
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY ML G PF + + RI Q+ + +S E + L + +P
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADP 262
Query: 646 AQRIRMMRVK 655
A+RI + ++
Sbjct: 263 AKRISIPEIR 272
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + H+ V HRDLK EN LL G +KI
Sbjct: 104 ERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 265 RILKTEPPIPE--DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
RIL + IP+ +SP+ ISR+ V DP +R+ E++ H +F
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS-----IPEIRNHEWF--------- 277
Query: 323 TKRIPAPFV--PKISNELDVSNFSDE-FTKMIPADSPAIVPP----NFDKIFKGSL 371
K +PA + ++ + D S+ + +++ + A VPP N + GSL
Sbjct: 278 LKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVPPAGTQNLNHYLTGSL 333
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 92
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 150
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 151 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 209 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 238
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 239 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 278
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 241 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 300
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 301 ENLHQQTPP 309
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 124 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 167
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 72
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 73 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 105
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 89
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 206 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 235
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 275
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 298 ENLHQQTPP 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 121 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Score = 32.7 bits (73), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 69
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 70 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 102
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 208 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 237
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 300 ENLHQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 123 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 208 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 237
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 300 ENLHQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 123 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 88
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 146
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 147 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 205 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 234
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 235 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 274
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 237 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 296
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 297 ENLHQQTPP 305
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 120 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 163
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK 152
D ILG+GS+S E +T +EYA+KI+ ++
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKR 65
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 95.9 bits (237), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 89
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 147
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 148 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 206 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 235
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 275
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 238 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 297
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 298 ENLHQQTPP 306
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 121 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 164
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILEK---------------------RHII 69
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 70 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 102
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 95.9 bits (237), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 73
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 131
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 132 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 190 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 219
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 220 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 259
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 222 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 281
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 282 ENLHQQTPP 290
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 105 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 148
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK 152
D ILG+GS+S E +T +EYA+KI+ ++
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKR 50
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 80/277 (28%), Positives = 113/277 (40%), Gaps = 38/277 (13%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEIN---LLRACQGHPNIVNLHCVFQD 442
+G G++ V R +K T + AVK I R E + + HPNIV V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILT 87
Query: 443 EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPE 502
H +RI GR F+E+EA +QL++ V + HS + HRDLK E
Sbjct: 88 PTHLAIIMEYASGGELYERICNAGR--FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLE 145
Query: 503 NLLFSDPAGDNIKVVDFGFACLKRESLH----TPCFTLQYAAPEVLRQDKSGYDENCDLW 558
N L +K+ DFG++ K LH + T Y APEVL
Sbjct: 146 NTLLDGSPAPRLKICDFGYS--KSSVLHSQPKSTVGTPAYIAPEVL-------------- 189
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
LRQ+ G + D+WS GV LY ML G PF + RI +
Sbjct: 190 ---------LRQEYDG--KIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVK 238
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVK 655
++ + +S E L + +PA RI + +K
Sbjct: 239 YSIPDDI--RISPECCHLISRIFVADPATRISIPEIK 273
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + HS + HRDLK EN LL G +KI
Sbjct: 105 ERICNAGR--FSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKI 159
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 7/57 (12%)
Query: 259 YHIQYRRILKTEPPIPEDL--SPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
Y +RIL + IP+D+ SP+ ISR+ V DP R+ E+K H +F
Sbjct: 227 YRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRIS-----IPEIKTHSWF 278
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 125/273 (45%), Gaps = 48/273 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDC----SEEINLLRACQGHPNIVNLH 437
LG G++ + + TG + AVKI++R+ +D EI L+ + HP+I+ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLY 77
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
V + D I + GR E EA R+ +Q+++AV + H VVHR
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
DLKPEN+L A N K+ DFG + + E L T C + YAAPEV+ E
Sbjct: 136 DLKPENVLLD--AHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPE-V 192
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+WS C GVILY +LCG +PF D+ ++ +I+
Sbjct: 193 DIWS-------------------C-----GVILYALLCGTLPF----DDEHVPTLFKKIR 224
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G F +V++ L +L V+P +R
Sbjct: 225 GGVFYIPEYLNRSVAT----LLMHMLQVDPLKR 253
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I + GR E EA R+ +Q+++AV + H VVHRDLKPEN+LL
Sbjct: 100 DYICKHGRV--EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 96
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 97 PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 154
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 155 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + C ++ DLW+LG I+Y ++ G PF R
Sbjct: 213 EKSA-----C---------------------KSSDLWALGCIIYQLVAGLPPF----RAG 242
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 243 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 282
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 245 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 304
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 305 ENLHQQTPP 313
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 128 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 171
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK 152
D ILG+GS+S E +T +EYA+KI+ ++
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKR 73
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 354 DSPAIVPPNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR 413
D PA+ P I S ++Y++ D +G G++ V R +K + + AVK I R
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKD----IGSGNFGVARLMRDKQSNELVAVKYIER 54
Query: 414 --KID--CSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
KID EI R+ + HPNIV V H +RI GR
Sbjct: 55 GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-- 111
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
F+E+EA +QL++ V + H+ V HRDLK EN L +K+ FG++ K L
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYS--KSSVL 169
Query: 530 HT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
H+ T Y APEVL L+++ G + D+WS G
Sbjct: 170 HSQPKDTVGTPAYIAPEVL-----------------------LKKEYDG--KVADVWSCG 204
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY ML G PF + + RI Q+ + +S E + L + +P
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADP 262
Query: 646 AQRIRMMRVK 655
A+RI + ++
Sbjct: 263 AKRISIPEIR 272
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + H+ V HRDLK EN LL G +KI
Sbjct: 104 ERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 265 RILKTEPPIPE--DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
RIL + IP+ +SP+ ISR+ V DP +R+ E++ H +F
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS-----IPEIRNHEWF--------- 277
Query: 323 TKRIPAPFV--PKISNELDVSNFSDE-FTKMIPADSPAIVPP----NFDKIFKGSL 371
K +PA + ++ + D S+ + +++ + A VPP N + GSL
Sbjct: 278 LKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVPPAGTQNLNHYLTGSL 333
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 132/310 (42%), Gaps = 47/310 (15%)
Query: 354 DSPAIVPPNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR 413
D PA+ P I S ++Y++ D +G G++ V R +K + + AVK I R
Sbjct: 2 DRPAVSGPMDLPIMHDS---DRYELVKD----IGSGNFGVARLMRDKQSNELVAVKYIER 54
Query: 414 --KID--CSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
KID EI R+ + HPNIV V H +RI GR
Sbjct: 55 GEKIDENVKREIINHRSLR-HPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR-- 111
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
F+E+EA +QL++ V + H+ V HRDLK EN L +K+ FG++ K L
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFGYS--KSSVL 169
Query: 530 H----TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
H + T Y APEVL L+++ G + D+WS G
Sbjct: 170 HSQPKSTVGTPAYIAPEVL-----------------------LKKEYDG--KVADVWSCG 204
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY ML G PF + + RI Q+ + +S E + L + +P
Sbjct: 205 VTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAI--PDYVHISPECRHLISRIFVADP 262
Query: 646 AQRIRMMRVK 655
A+RI + ++
Sbjct: 263 AKRISIPEIR 272
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
+RI GR F+E+EA +QL++ V + H+ V HRDLK EN LL G +KI
Sbjct: 104 ERICNAGR--FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKI 158
Score = 30.0 bits (66), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 23/116 (19%)
Query: 265 RILKTEPPIPE--DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
RIL + IP+ +SP+ ISR+ V DP +R+ E++ H +F
Sbjct: 232 RILNVQYAIPDYVHISPECRHLISRIFVADPAKRIS-----IPEIRNHEWF--------- 277
Query: 323 TKRIPAPFV--PKISNELDVSNFSDE-FTKMIPADSPAIVPP----NFDKIFKGSL 371
K +PA + ++ + D S+ + +++ + A VPP N + GSL
Sbjct: 278 LKNLPADLMNDNTMTTQFDESDQPGQSIEEIMQIIAEATVPPAGTQNLNHYLTGSL 333
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 132/294 (44%), Gaps = 48/294 (16%)
Query: 363 FDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDC 417
++KI K + D D ++G G++ + K++ + YA+K++S+ + D
Sbjct: 60 YEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDS 119
Query: 418 S---EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENE 474
+ EE +++ A P +V L C FQD+ + Y D + E
Sbjct: 120 AFFWEERDIM-AFANSPWVVQLFCAFQDDKYLYMVMEYMPGG---DLVNLMSNYDVPEKW 175
Query: 475 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES---LH- 530
A ++V A+ +HS G++HRD+KP+N+L D G ++K+ DFG C+K + +H
Sbjct: 176 AKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL-DKHG-HLKLADFG-TCMKMDETGMVHC 232
Query: 531 -TPCFTLQYAAPEVLR-QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
T T Y +PEVL+ Q GY Y CD WS+GV L
Sbjct: 233 DTAVGTPDYISPEVLKSQGGDGY-----------------------YGRECDWWSVGVFL 269
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLT 642
+ ML G PF+A S + IM F DAE +S AK L + LT
Sbjct: 270 FEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAE----ISKHAKNLICAFLT 319
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 263 YRRIL--KTEPPIPED--LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDW 318
Y +I+ K PED +S + I L D RLG + EE+K+HPFF W
Sbjct: 288 YSKIMDHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLGRNGV--EEIKQHPFFKNDQW 344
Query: 319 DDLATKRIPAPFVPKISNELDVSNFSD 345
+ + AP VP++S+++D SNF D
Sbjct: 345 NWDNIRETAAPVVPELSSDIDSSNFDD 371
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 24/35 (68%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A ++V A+ +HS G++HRD+KP+N+LL
Sbjct: 173 EKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLL 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 42/277 (15%)
Query: 372 FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDCSEEINLLRAC 427
+E+Y + D LG G + + RCVE S+ + Y K + K + +EI++L
Sbjct: 3 LYEKYMIAED----LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIA 58
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
+ H NI++LH F+ +RI E E + Q+ A+
Sbjct: 59 R-HRNILHLHESFESMEELVMIFEFISGLDIFERINTSA-FELNEREIVSYVHQVCEALQ 116
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTL-QYAAPEVLR 545
F+HS + H D++PEN+++ IK+++FG A LK FT +Y APEV +
Sbjct: 117 FLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQ 176
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
D D+WSLG ++Y +L G PF A +
Sbjct: 177 HDVVS--------------------------TATDMWSLGTLVYVLLSGINPFLAETNQQ 210
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLT 642
I+ I ++ FD EA+ +S EA + LL
Sbjct: 211 ----IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV 243
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
E E + Q+ A+ F+HS + H D++PEN++ + IKI
Sbjct: 99 LNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI 145
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 59/281 (20%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPNIVNLH 437
+LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP + L
Sbjct: 16 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 75
Query: 438 CVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS- 491
FQ V Y +R+ F+E+ A ++V+A+ ++HS
Sbjct: 76 YSFQTHDRLCFVMEYANGGELFFHLSRERV-------FSEDRARFYGAEIVSALDYLHSE 128
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDK 548
+ VV+RDLK ENL+ D G +IK+ DFG ++ C T +Y APEVL
Sbjct: 129 KNVVYRDLKLENLML-DKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---- 182
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + Y D W LGV++Y M+CGR+PF+ ++D L
Sbjct: 183 ----------------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++E +F T+ EAK L LL +P QR+
Sbjct: 219 FELILMEEIRFP------RTLGPEAKSLLSGLLKKDPKQRL 253
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ IL E P L P+ +S LL KDP++RLGGG DA+E+ +H FF I W +
Sbjct: 219 FELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVY 278
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFD 364
K++ PF P++++E D F +EFT A I PP+ D
Sbjct: 279 EKKLSPPFKPQVTSETDTRYFDEEFT----AQMITITPPDQD 316
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHS-RGVVHRDLKPENLLL 955
F+E+ A ++V+A+ ++HS + VV+RDLK ENL+L
Sbjct: 106 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 143
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 59/281 (20%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPNIVNLH 437
+LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP + L
Sbjct: 17 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 76
Query: 438 CVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS- 491
FQ V Y +R+ F+E+ A ++V+A+ ++HS
Sbjct: 77 YSFQTHDRLCFVMEYANGGELFFHLSRERV-------FSEDRARFYGAEIVSALDYLHSE 129
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDK 548
+ VV+RDLK ENL+ D G +IK+ DFG ++ C T +Y APEVL
Sbjct: 130 KNVVYRDLKLENLML-DKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---- 183
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + Y D W LGV++Y M+CGR+PF+ ++D L
Sbjct: 184 ----------------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL 219
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++E +F T+ EAK L LL +P QR+
Sbjct: 220 FELILMEEIRFP------RTLGPEAKSLLSGLLKKDPKQRL 254
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ IL E P L P+ +S LL KDP++RLGGG DA+E+ +H FF I W +
Sbjct: 220 FELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVY 279
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFD 364
K++ PF P++++E D F +EFT A I PP+ D
Sbjct: 280 EKKLSPPFKPQVTSETDTRYFDEEFT----AQMITITPPDQD 317
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHS-RGVVHRDLKPENLLL 955
F+E+ A ++V+A+ ++HS + VV+RDLK ENL+L
Sbjct: 107 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 144
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 133/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + ++ DLW+LG C I+Y ++ G PF A +
Sbjct: 208 EKSA--XKSSDLWALG-----------------C-------IIYQLVAGLPPFRAGNEG- 240
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I A+I + +++F + + +A++L + LL ++ +R+
Sbjct: 241 ---LIFAKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDWDDL 321
+ +I+K E PE P D + +LLV D +RLG E++ LK HPFF + W++L
Sbjct: 243 FAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTWENL 302
Query: 322 ATKRIP 327
+ P
Sbjct: 303 HQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 25/27 (92%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLS 956
++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 140 EIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 127/281 (45%), Gaps = 59/281 (20%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQG--HPNIVNLH 437
+LG G++ EK+TG+ YA+KI+ +++ + + + R Q HP + L
Sbjct: 15 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALK 74
Query: 438 CVFQDE-----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS- 491
FQ V Y +R+ F+E+ A ++V+A+ ++HS
Sbjct: 75 YSFQTHDRLCFVMEYANGGELFFHLSRERV-------FSEDRARFYGAEIVSALDYLHSE 127
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQDK 548
+ VV+RDLK ENL+ D G +IK+ DFG ++ C T +Y APEVL
Sbjct: 128 KNVVYRDLKLENLML-DKDG-HIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVL---- 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ + Y D W LGV++Y M+CGR+PF+ ++D L
Sbjct: 182 ----------------------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY--NQDHEKL 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ ++E +F T+ EAK L LL +P QR+
Sbjct: 218 FELILMEEIRFP------RTLGPEAKSLLSGLLKKDPKQRL 252
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 57/102 (55%), Gaps = 4/102 (3%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ IL E P L P+ +S LL KDP++RLGGG DA+E+ +H FF I W +
Sbjct: 218 FELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVY 277
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFD 364
K++ PF P++++E D F +EFT A I PP+ D
Sbjct: 278 EKKLSPPFKPQVTSETDTRYFDEEFT----AQMITITPPDQD 315
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHS-RGVVHRDLKPENLLL 955
F+E+ A ++V+A+ ++HS + VV+RDLK ENL+L
Sbjct: 105 FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLML 142
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 121/272 (44%), Gaps = 46/272 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEI--NLLRACQG-----HPNIVNLHC 438
LG G++ + + TG + AVKI++R+ S ++ + R Q HP+I+ L+
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
V + D I + GR E E+ R+ +Q+++ V + H VVHRD
Sbjct: 84 VISTPSDIFMVMEYVSGGELFDYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRD 141
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
LKPEN+L A N K+ DFG + + E L C + YAAPEV+ E D
Sbjct: 142 LKPENVLLD--AHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPE-VD 198
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+W S GVILY +LCG +PF DD ++ +I +
Sbjct: 199 IW------------------------SSGVILYALLCGTLPF----DDDHVPTLFKKICD 230
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G F +V S L K +L V+P +R
Sbjct: 231 GIFYTPQYLNPSVIS----LLKHMLQVDPMKR 258
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
D I + GR E E+ R+ +Q+++ V + H VVHRDLKPEN+LL
Sbjct: 105 DYICKNGR--LDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA 151
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 39/277 (14%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCSEEINLLRACQGHPNIV 434
+ K ILG G + +C E +TG + A KII K + EI+++ H N++
Sbjct: 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLI 149
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ F+ + DRI + TE + M+Q+ + MH +
Sbjct: 150 QLYDAFESKNDIVLVMEYVDGGELFDRIIDES-YNLTELDTILFMKQICEGIRHMHQMYI 208
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
+H DLKPEN+L + IK++DFG A RE L T ++ APEV+ D +
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFP 268
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
D+W S+GVI Y +L G PF + ++ +I+A
Sbjct: 269 --TDMW------------------------SVGVIAYMLLSGLSPFLGDNDAETLNNILA 302
Query: 613 RIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+++ + E + +S EAKE LL + RI
Sbjct: 303 ----CRWDLEDEEFQDISEEAKEFISKLLIKEKSWRI 335
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
TE + M+Q+ + MH ++H DLKPEN+L IKI
Sbjct: 184 LTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKI 230
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/273 (30%), Positives = 124/273 (45%), Gaps = 48/273 (17%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDC----SEEINLLRACQGHPNIVNLH 437
LG G++ + + TG + AVKI++R+ +D EI L+ + HP+I+ L+
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHIIKLY 77
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
V + D I + GR E EA R+ +Q+++AV + H VVHR
Sbjct: 78 QVISTPTDFFMVMEYVSGGELFDYICKHGRV--EEMEARRLFQQILSAVDYCHRHMVVHR 135
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
DLKPEN+L A N K+ DFG + + E L C + YAAPEV+ E
Sbjct: 136 DLKPENVLLD--AHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPE-V 192
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIK 615
D+WS C GVILY +LCG +PF D+ ++ +I+
Sbjct: 193 DIWS-------------------C-----GVILYALLCGTLPF----DDEHVPTLFKKIR 224
Query: 616 EGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
G F +V++ L +L V+P +R
Sbjct: 225 GGVFYIPEYLNRSVAT----LLMHMLQVDPLKR 253
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I + GR E EA R+ +Q+++AV + H VVHRDLKPEN+LL
Sbjct: 100 DYICKHGRV--EEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLL 144
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 132/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 91
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 149
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ ++ T QY +PE+L
Sbjct: 150 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + ++ DLW +LG I+Y ++ G PF R
Sbjct: 208 EKSA--SKSSDLW------------------------ALGCIIYQLVAGLPPF----RAG 237
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 238 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 277
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 240 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 299
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 300 ENLHQQTPP 308
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 123 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 166
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 71
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 72 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 104
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCS---EEINLLRACQGH 430
D + ++G G++ + KST + YA+K++S+ + D + EE +++ A
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANS 128
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V L FQD+ + Y D + E A ++V A+ +H
Sbjct: 129 PWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 185
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESL---HTPCFTLQYAAPEVLR 545
S G +HRD+KP+N+L D +G ++K+ DFG C+K +E + T T Y +PEVL+
Sbjct: 186 SMGFIHRDVKPDNMLL-DKSG-HLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLK 242
Query: 546 -QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
Q GY Y CD WS+GV LY ML G PF+A S
Sbjct: 243 SQGGDGY-----------------------YGRECDWWSVGVFLYEMLVGDTPFYADSLV 279
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLT 642
+ IM F D + +S EAK L + LT
Sbjct: 280 GTYSKIMNHKNSLTFPDDND----ISKEAKNLICAFLT 313
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 272 PIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFV 331
P D+S + + I L D RLG + EE+KRH FF W + AP V
Sbjct: 295 PDDNDISKEAKNLICAFLT-DREVRLGRNGV--EEIKRHLFFKNDQWAWETLRDTVAPVV 351
Query: 332 PKISNELDVSNFSD 345
P +S+++D SNF D
Sbjct: 352 PDLSSDIDTSNFDD 365
Score = 36.2 bits (82), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E A ++V A+ +HS G +HRD+KP+N+LL SG+L
Sbjct: 167 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHL 207
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 129/283 (45%), Gaps = 60/283 (21%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISRKI---------DCSEEINLLRACQGHPN 432
+LG G Y R+ +TG+ +A+K++ + + E N+L + HP
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPF 82
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
IV+L FQ Y ++ ++G F E+ A + ++ A+ +H +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQK 140
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL------HTPCFTLQYAAPEVLRQ 546
G+++RDLKPEN++ + ++K+ DFG L +ES+ HT C T++Y APE+L
Sbjct: 141 GIIYRDLKPENIMLNHQG--HVKLTDFG---LCKESIHDGTVTHTFCGTIEYMAPEILM- 194
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
+SG++ D W SLG ++Y ML G PF +R +
Sbjct: 195 -RSGHNRAVDWW------------------------SLGALMYDMLTGAPPFTGENRKKT 229
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ +I + + N ++ EA++L K LL N A R+
Sbjct: 230 ----IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRL 264
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 265 RILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATK 324
+ILK + +P L+ + D + +LL ++ RLG G DA E++ HPFF I+W++L +
Sbjct: 232 KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLAR 291
Query: 325 RIPAPFVPKISNELDVSNFSDEFTKMIPADSP 356
++ PF P + +E DVS F +FT+ P DSP
Sbjct: 292 KVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSP 323
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
F E+ A + ++ A+ +H +G+++RDLKPEN++L+
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCS---EEINLLRACQGH 430
D + ++G G++ + KST + YA+K++S+ + D + EE +++ A
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANS 133
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V L FQD+ + Y D + E A ++V A+ +H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESL---HTPCFTLQYAAPEVLR 545
S G +HRD+KP+N+L D +G ++K+ DFG C+K +E + T T Y +PEVL+
Sbjct: 191 SMGFIHRDVKPDNMLL-DKSG-HLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 546 -QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
Q GY Y CD WS+GV LY ML G PF+A S
Sbjct: 248 SQGGDGY-----------------------YGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLT 642
+ IM F D + +S EAK L + LT
Sbjct: 285 GTYSKIMNHKNSLTFPDDND----ISKEAKNLICAFLT 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 272 PIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFV 331
P D+S + + I L D RLG + EE+KRH FF W + AP V
Sbjct: 300 PDDNDISKEAKNLICAFLT-DREVRLGRNGV--EEIKRHLFFKNDQWAWETLRDTVAPVV 356
Query: 332 PKISNELDVSNFSD 345
P +S+++D SNF D
Sbjct: 357 PDLSSDIDTSNFDD 370
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E A ++V A+ +HS G +HRD+KP+N+LL SG+L
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHL 212
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 48/278 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----KIDCS---EEINLLRACQGH 430
D + ++G G++ + KST + YA+K++S+ + D + EE +++ A
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM-AFANS 133
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V L FQD+ + Y D + E A ++V A+ +H
Sbjct: 134 PWVVQLFYAFQDDRYLYMVMEYMPGG---DLVNLMSNYDVPEKWARFYTAEVVLALDAIH 190
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESL---HTPCFTLQYAAPEVLR 545
S G +HRD+KP+N+L D +G ++K+ DFG C+K +E + T T Y +PEVL+
Sbjct: 191 SMGFIHRDVKPDNMLL-DKSG-HLKLADFG-TCMKMNKEGMVRCDTAVGTPDYISPEVLK 247
Query: 546 -QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
Q GY Y CD WS+GV LY ML G PF+A S
Sbjct: 248 SQGGDGY-----------------------YGRECDWWSVGVFLYEMLVGDTPFYADSLV 284
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLT 642
+ IM F D + +S EAK L + LT
Sbjct: 285 GTYSKIMNHKNSLTFPDDND----ISKEAKNLICAFLT 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Query: 272 PIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFV 331
P D+S + + I L D RLG + EE+KRH FF W + AP V
Sbjct: 300 PDDNDISKEAKNLICAFLT-DREVRLGRNGV--EEIKRHLFFKNDQWAWETLRDTVAPVV 356
Query: 332 PKISNELDVSNFSD 345
P +S+++D SNF D
Sbjct: 357 PDLSSDIDTSNFDD 370
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E A ++V A+ +HS G +HRD+KP+N+LL SG+L
Sbjct: 172 EKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDK-SGHL 212
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 69
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 127
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 128 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + ++ DLW +LG I+Y ++ G PF R
Sbjct: 186 EKSAC--KSSDLW------------------------ALGCIIYQLVAGLPPF----RAG 215
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 216 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 255
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 218 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 277
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 278 ENLHQQTPP 286
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 101 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 144
Score = 33.1 bits (74), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 11 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 49
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 50 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 82
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 68
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 126
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 127 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + ++ DLW +LG I+Y ++ G PF R
Sbjct: 185 EKSAC--KSSDLW------------------------ALGCIIYQLVAGLPPF----RAG 214
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 215 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 254
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 217 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 276
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 277 ENLHQQTPP 285
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 100 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 143
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 10 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 48
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 49 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 81
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 131/284 (46%), Gaps = 52/284 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGH 430
D ILG+GS+S E +T +EYA+KI+ ++ E E +++ H
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-H 67
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P V L+ FQD+ Y IR+ G F E ++V+A+ ++H
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG--SFDETCTRFYTAEIVSALEYLH 125
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQYAAPEVLR 545
+G++HRDLKPEN+L ++ +I++ DFG A + K+ + T QY +PE+L
Sbjct: 126 GKGIIHRDLKPENILLNEDM--HIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + ++ DLW +LG I+Y ++ G PF R
Sbjct: 184 EKSAC--KSSDLW------------------------ALGCIIYQLVAGLPPF----RAG 213
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ I +I + +++F + + +A++L + LL ++ +R+
Sbjct: 214 NEYLIFQKIIKLEYDFPEKFF----PKARDLVEKLLVLDATKRL 253
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 260 HIQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAE-ELKRHPFFNVIDW 318
++ +++I+K E PE P D + +LLV D +RLG E++ LK HPFF + W
Sbjct: 216 YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVTW 275
Query: 319 DDLATKRIP 327
++L + P
Sbjct: 276 ENLHQQTPP 284
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
IR+ G F E ++V+A+ ++H +G++HRDLKPEN+LL+
Sbjct: 99 IRKIG--SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN 142
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 42/105 (40%), Gaps = 33/105 (31%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNICRRCV 176
D ILG+GS+S E +T +EYA+KI+ + R +
Sbjct: 9 DFKFGKILGEGSFSTVVLARELATSREYAIKILEK---------------------RHII 47
Query: 177 EKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIVNLHCVFQDE 221
+E V ++R+ D ++ HP V L+ FQD+
Sbjct: 48 -----KENKVPYVTRERDVMSRLD-------HPFFVKLYFTFQDD 80
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 124/290 (42%), Gaps = 58/290 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQ-----GHP 431
D + LG G + EK++ A+K++ ++ E L R + HP
Sbjct: 9 DFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 68
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L+ F D Y +++ + F E + + +L A+ + HS
Sbjct: 69 NILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHS 126
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPEVL 544
+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE++
Sbjct: 127 KKVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRAALCGTLDYLPPEMI 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+ +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 179 --EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQ 212
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
D+ RI +F F V+ A++L LL NP+QR + V
Sbjct: 213 DT----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 254
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKKVIHRDIKPENLLL-GSAGEL 147
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 91.3 bits (225), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 93 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 150
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 151 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 206
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 207 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 240
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 241 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 173
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 118/282 (41%), Gaps = 49/282 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSE-EINLLRACQGH 430
D + +LG GS+ K T + YA+KI+ + + +C+ E +L
Sbjct: 20 DFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKP 79
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P + LH FQ Y I+Q G+ F E +A ++ + F+H
Sbjct: 80 PFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGK--FKEPQAVFYAAEISIGLFFLH 137
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQD 547
RG+++RDLK +N++ D G +IK+ DFG + + C T Y APE++
Sbjct: 138 KRGIIYRDLKLDNVML-DSEG-HIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQ 195
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
G ++ D W+ GV+LY ML G+ PF D+
Sbjct: 196 PYG--------------------------KSVDWWAYGVLLYEMLAGQPPFDGEDEDELF 229
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
SIM + ++S EA + K L+T +PA+R+
Sbjct: 230 QSIMEH--------NVSYPKSLSKEAVSICKGLMTKHPAKRL 263
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
++ I++ P+ LS + L+ K P +RLG G +++ H FF IDW+ L
Sbjct: 229 FQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLE 288
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPN 362
+ I PF PK+ + NF FT+ P + PP+
Sbjct: 289 NREIQPPFKPKVCGK-GAENFDKFFTR----GQPVLXPPD 323
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I+Q G+ F E +A ++ + F+H RG+++RDLK +N++L
Sbjct: 111 IQQVGK--FKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVML 153
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 123/290 (42%), Gaps = 58/290 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQ-----GHP 431
D + LG G + EK + A+K++ ++ E L R + HP
Sbjct: 35 DFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHP 94
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L+ F D Y +++ + F E + + +L A+ + HS
Sbjct: 95 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYCHS 152
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPEVL 544
+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE++
Sbjct: 153 KRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRDDLCGTLDYLPPEMI 204
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+ +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 205 --EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQ 238
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 239 ET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 280
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 131 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 173
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A K++ + + S EI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGF 107
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D+ Y + K R TE EA MRQ + V ++H+ V+H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL +D ++K+ DFG A E T C T Y APEVL K G+
Sbjct: 166 RDLKLGNLFLNDDM--DVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVL--CKKGHSF 221
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+W SLG ILYT+L G+ PF ++ + R
Sbjct: 222 EVDIW------------------------SLGCILYTLLVGKPPFETSCLKETYI----R 253
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 254 IKKNEYSVPRH----INPVASALIRRMLHADPTLR 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA MRQ + V ++H+ V+HRDLK NL L+
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 60/283 (21%)
Query: 385 ILGDGSYS---VCRRCVEKSTGQEYAVKIISRKI---------DCSEEINLLRACQGHPN 432
+LG G Y R+ +TG+ +A+K++ + + E N+L + HP
Sbjct: 24 VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVK-HPF 82
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
IV+L FQ Y ++ ++G F E+ A + ++ A+ +H +
Sbjct: 83 IVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGI--FMEDTACFYLAEISMALGHLHQK 140
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP------CFTLQYAAPEVLRQ 546
G+++RDLKPEN++ + ++K+ DFG L +ES+H C T++Y APE+L
Sbjct: 141 GIIYRDLKPENIMLNHQG--HVKLTDFG---LCKESIHDGTVTHXFCGTIEYMAPEILM- 194
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
+SG++ D W SLG ++Y ML G PF +R +
Sbjct: 195 -RSGHNRAVDWW------------------------SLGALMYDMLTGAPPFTGENRKKT 229
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ +I + + N ++ EA++L K LL N A R+
Sbjct: 230 ----IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRL 264
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 265 RILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATK 324
+ILK + +P L+ + D + +LL ++ RLG G DA E++ HPFF I+W++L +
Sbjct: 232 KILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLAR 291
Query: 325 RIPAPFVPKISNELDVSNFSDEFTKMIPADSP 356
++ PF P + +E DVS F +FT+ P DSP
Sbjct: 292 KVEPPFKPLLQSEEDVSQFDSKFTRQTPVDSP 323
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
F E+ A + ++ A+ +H +G+++RDLKPEN++L+
Sbjct: 118 FMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN 155
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 84 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 141
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 142 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 197
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 198 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 231
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 232 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 271
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 122 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 164
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYC 129
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 185
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 186 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 219
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 220 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 259
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 152
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-TLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++C S T TL Y PE++ +
Sbjct: 126 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSCHAPSSRRTTLSGTLDYLPPEMI--EG 181
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 182 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 215
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 216 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 255
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 148
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 86
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 144
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E T C T Y APEVL
Sbjct: 145 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL--------- 193
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 194 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 232
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 233 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 263
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 112 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 155
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 230 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 274
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 118/271 (43%), Gaps = 45/271 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSEEINLLRACQGHPNIVNLHC 438
LG GS+ + G+ YA+K++ ++I + + + L+ + HP I+ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
FQD + +R+ R F A ++ A+ ++HS+ +++RD
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQR--FPNPVAKFYAAEVCLALEYLHSKDIIYRD 131
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLW 558
LKPEN+L D G +IK+ DFGFA + + C T Y APEV+ Y+++ D W
Sbjct: 132 LKPENILL-DKNG-HIKITDFGFAKYVPDVTYXLCGTPDYIAPEVV--STKPYNKSIDWW 187
Query: 559 SLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQ 618
S G+++Y ML G PF+ D + + +I +
Sbjct: 188 S------------------------FGILIYEMLAGYTPFY----DSNTMKTYEKILNAE 219
Query: 619 FNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
F + + K+L L+T + +QR+
Sbjct: 220 LRFPP----FFNEDVKDLLSRLITRDLSQRL 246
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
Y +IL E P + DV D +SRL+ +D +RLG + E++K HP+F + W+ L
Sbjct: 212 YEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLL 271
Query: 323 TKRIPAPFVPKI-SNELDVSNF 343
++ I P+ P I + D S F
Sbjct: 272 SRNIETPYEPPIQQGQGDTSQF 293
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 22/26 (84%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLL 955
++ A+ ++HS+ +++RDLKPEN+LL
Sbjct: 114 EVCLALEYLHSKDIIYRDLKPENILL 139
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--EINLLRACQ-----GHP 431
D D LG G + EK A+K++ + E E L R + HP
Sbjct: 16 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 75
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ ++ F D Y +++ GR F E ++ M +L A+H+ H
Sbjct: 76 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE 133
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC----LKRESLHTPCFTLQYAAPEVLRQD 547
R V+HRD+KPENLL +K+ DFG++ L+R + C TL Y PE++ +
Sbjct: 134 RKVIHRDIKPENLLMG--YKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMI--E 186
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
+DE DLW GV+ C Y L G PF + S ++
Sbjct: 187 GKTHDEKVDLWCAGVL---------------C---------YEFLVGMPPFDSPSHTETH 222
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ N D + +S +K+L LL +P QR+
Sbjct: 223 RRIV--------NVDLKFPPFLSDGSKDLISKLLRYHPPQRL 256
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+++ GR F E ++ M +L A+H+ H R V+HRD+KPENLL+ G G L
Sbjct: 106 LQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM-GYKGEL 154
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 181 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 214
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 215 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 254
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 82
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E T C T Y APEVL
Sbjct: 141 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL--------- 189
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 190 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 228
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 229 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 259
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--EINLLRACQ-----GHP 431
D D LG G + EK A+K++ + E E L R + HP
Sbjct: 15 DFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ ++ F D Y +++ GR F E ++ M +L A+H+ H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE 132
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC----LKRESLHTPCFTLQYAAPEVLRQD 547
R V+HRD+KPENLL +K+ DFG++ L+R + C TL Y PE++ +
Sbjct: 133 RKVIHRDIKPENLLMG--YKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMI--E 185
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
+DE DLW GV+ C Y L G PF + S ++
Sbjct: 186 GKTHDEKVDLWCAGVL---------------C---------YEFLVGMPPFDSPSHTETH 221
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ N D + +S +K+L LL +P QR+
Sbjct: 222 RRIV--------NVDLKFPPFLSDGSKDLISKLLRYHPPQRL 255
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+++ GR F E ++ M +L A+H+ H R V+HRD+KPENLL+ G G L
Sbjct: 105 LQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM-GYKGEL 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTELCGTLDYLPPEMI--EG 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 181 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 214
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 215 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 254
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 114/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 82
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 140
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E T C T Y APEVL
Sbjct: 141 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVL--------- 189
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 190 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 228
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 229 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 259
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 108 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 151
Score = 29.6 bits (65), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 226 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 270
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 90.1 bits (222), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 183
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 184 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 218 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 257
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 117/282 (41%), Gaps = 52/282 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--EINLLRACQ-----GHP 431
D D LG G + EK A+K++ + E E L R + HP
Sbjct: 15 DFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHP 74
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ ++ F D Y +++ GR F E ++ M +L A+H+ H
Sbjct: 75 NILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADALHYCHE 132
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC----LKRESLHTPCFTLQYAAPEVLRQD 547
R V+HRD+KPENLL +K+ DFG++ L+R + C TL Y PE++ +
Sbjct: 133 RKVIHRDIKPENLLMG--YKGELKIADFGWSVHAPSLRRRXM---CGTLDYLPPEMI--E 185
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
+DE DLW GV+ C Y L G PF + S ++
Sbjct: 186 GKTHDEKVDLWCAGVL---------------C---------YEFLVGMPPFDSPSHTETH 221
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
I+ N D + +S +K+L LL +P QR+
Sbjct: 222 RRIV--------NVDLKFPPFLSDGSKDLISKLLRYHPPQRL 255
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 3/52 (5%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+++ GR F E ++ M +L A+H+ H R V+HRD+KPENLL+ G G L
Sbjct: 105 LQKHGR--FDEQRSATFMEELADALHYCHERKVIHRDIKPENLLM-GYKGEL 153
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 66 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 123
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 124 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 179
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 180 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 213
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 214 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 247
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 104 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 146
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 185
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 186 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 219
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 220 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 259
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 152
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 126
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 127 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRXXLCGTLDYLPPE 178
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 179 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 212
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 213 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 256
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 149
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 71 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 128
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 129 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 184
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 185 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 218
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 219 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 252
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 151
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE + +
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEXI--EG 185
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 186 RXHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 219
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 220 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPXLREV 259
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 152
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRAALCGTLDYLPPE 179
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 180 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 213
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 214 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 257
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 126 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRDTLCGTLDYLPPE 177
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 178 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 211
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 212 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 255
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 148
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 68 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 125
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 126 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRTDLCGTLDYLPPE 177
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 178 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 211
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 212 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 255
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 106 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 148
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 51/226 (22%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRAALCGTLDYLPPE 176
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 177 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 210
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ RI +F F V+ A++L LL NP+QR
Sbjct: 211 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 248
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 129
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRTDLCGTLDYLPPE 181
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 182 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 215
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 216 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 259
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 152
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 51/226 (22%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRTDLCGTLDYLPPE 176
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 177 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 210
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ RI +F F V+ A++L LL NP+QR
Sbjct: 211 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 248
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 183
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 184 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 218 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 251
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 51/226 (22%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRXXLCGTLDYLPPE 176
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 177 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 210
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ RI +F F V+ A++L LL NP+QR
Sbjct: 211 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 248
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 101/226 (44%), Gaps = 51/226 (22%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRXXLCGTLDYLPPE 179
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 180 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 213
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ RI +F F V+ A++L LL NP+QR
Sbjct: 214 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 251
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRTDLCGTLDYLPPE 176
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 177 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 210
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 211 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 254
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 67 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 124
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 125 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTXLCGTLDYLPPEMI--EG 180
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 181 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 214
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 215 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 248
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 105 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 147
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 64 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 121
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ DFG++ S T C TL Y PE++ +
Sbjct: 122 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 177
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 178 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 211
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 212 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 245
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 102 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 144
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P C TL Y PE
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRDDLCGTLDYLPPE 179
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 180 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 213
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 214 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 257
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A K++ + + S EI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGF 107
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D+ Y + K R TE EA MRQ + V ++H+ V+H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL +D ++K+ DFG A E C T Y APEVL K G+
Sbjct: 166 RDLKLGNLFLNDDM--DVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVL--CKKGHSF 221
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+W SLG ILYT+L G+ PF ++ + R
Sbjct: 222 EVDIW------------------------SLGCILYTLLVGKPPFETSCLKETYI----R 253
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 254 IKKNEYSVPRH----INPVASALIRRMLHADPTLR 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA MRQ + V ++H+ V+HRDLK NL L+
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 104
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 162
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E C T Y APEVL
Sbjct: 163 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL--------- 211
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 212 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 250
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 251 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 281
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 130 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 173
Score = 29.6 bits (65), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 248 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 292
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 106
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 164
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E C T Y APEVL
Sbjct: 165 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL--------- 213
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 214 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 252
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 253 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 283
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 132 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 175
Score = 29.3 bits (64), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 250 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 294
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 119/284 (41%), Gaps = 46/284 (16%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQ-----GHP 431
D D LG G + E+ + A+K++ ++ E L R + HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L+ F D Y +++ R F E + + +L A+ + HS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHS 130
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDKSG 550
+ V+HRD+KPENLL + +K+ DFG++ S T C TL Y PE++ +
Sbjct: 131 KRVIHRDIKPENLLLG--SNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI--EGRM 186
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+DE DLWSLGV+ C Y L G PF A + ++
Sbjct: 187 HDEKVDLWSLGVL---------------C---------YEFLVGMPPFEAHTYQET---- 218
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL N +QR+ + V
Sbjct: 219 YRRISRVEFTFP----DFVTEGARDLISRLLKHNASQRLTLAEV 258
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSNGEL 151
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A K++ + + S EI + ++ +P++V
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGF 91
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D+ Y + K R TE EA MRQ + V ++H+ V+H
Sbjct: 92 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 149
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL +D ++K+ DFG A E C T Y APEVL K G+
Sbjct: 150 RDLKLGNLFLNDDM--DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL--CKKGHSF 205
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+W SLG ILYT+L G+ PF ++ + R
Sbjct: 206 EVDIW------------------------SLGCILYTLLVGKPPFETSCLKETYI----R 237
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 238 IKKNEYSVPRH----INPVASALIRRMLHADPTLR 268
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA MRQ + V ++H+ V+HRDLK NL L+
Sbjct: 117 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 160
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 116/275 (42%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A K++ + + S EI + ++ +P++V
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLD-NPHVVGF 107
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D+ Y + K R TE EA MRQ + V ++H+ V+H
Sbjct: 108 HGFFEDDDFVYVVLEICRRRSLLEL--HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIH 165
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL +D ++K+ DFG A E C T Y APEVL K G+
Sbjct: 166 RDLKLGNLFLNDDM--DVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVL--CKKGHSF 221
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+W SLG ILYT+L G+ PF ++ + R
Sbjct: 222 EVDIW------------------------SLGCILYTLLVGKPPFETSCLKETYI----R 253
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 254 IKKNEYSVPRH----INPVASALIRRMLHADPTLR 284
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA MRQ + V ++H+ V+HRDLK NL L+
Sbjct: 133 HKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN 176
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 102/226 (45%), Gaps = 39/226 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 69 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 126
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ +FG++ S T C TL Y PE++ +
Sbjct: 127 HSKRVIHRDIKPENLLLGS-AGE-LKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 182
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 183 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 216
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI +F F V+ A++L LL NP+QR + V
Sbjct: 217 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 256
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 107 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 149
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 100/220 (45%), Gaps = 39/220 (17%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 70 HPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSK--FDEQRTATYITELANALSYC 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-CFTLQYAAPEVLRQDK 548
HS+ V+HRD+KPENLL AG+ +K+ +FG++ S T C TL Y PE++ +
Sbjct: 128 HSKRVIHRDIKPENLLLGS-AGE-LKIANFGWSVHAPSSRRTTLCGTLDYLPPEMI--EG 183
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+DE DLWSLGV+ C Y L G+ PF A + ++
Sbjct: 184 RMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANTYQET-- 217
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
RI +F F V+ A++L LL NP+QR
Sbjct: 218 --YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQR 251
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 108 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 150
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 120/290 (41%), Gaps = 58/290 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII--SRKIDCSEEINLLRACQ-----GHP 431
D D LG G + E+ + A+K++ ++ E L R + HP
Sbjct: 13 DFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHP 72
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L+ F D Y +++ R F E + + +L A+ + HS
Sbjct: 73 NILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSR--FDEQRTATYITELANALSYCHS 130
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-------CFTLQYAAPEVL 544
+ V+HRD+KPENLL + +K+ DFG+ S+H P C TL Y PE++
Sbjct: 131 KRVIHRDIKPENLLLG--SNGELKIADFGW------SVHAPSSRRDTLCGTLDYLPPEMI 182
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
+ +DE DLWSLGV+ C Y L G PF A +
Sbjct: 183 --EGRMHDEKVDLWSLGVL---------------C---------YEFLVGMPPFEAHTYQ 216
Query: 605 DSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL N +QR+ + V
Sbjct: 217 ET----YRRISRVEFTFP----DFVTEGARDLISRLLKHNASQRLTLAEV 258
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 109 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSNGEL 151
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 116/282 (41%), Gaps = 49/282 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGH 430
D ++G GS+ K+ YAVK++ +K E N+L H
Sbjct: 39 DFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH 98
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V LH FQ Y + Q+ RC F E A ++ +A+ ++H
Sbjct: 99 PFLVGLHFSFQTADKLYFVLDYINGGELFYHL-QRERC-FLEPRARFYAAEIASALGYLH 156
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRE---SLHTPCFTLQYAAPEVLRQD 547
S +V+RDLKPEN+L D G +I + DFG E + T C T +Y APEVL
Sbjct: 157 SLNIVYRDLKPENILL-DSQG-HIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLH-- 212
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
K YD D W LG +LY ML G PF++R+
Sbjct: 213 ------------------------KQPYDRTVDWWCLGAVLYEMLYGLPPFYSRN----- 243
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A + + N + +++ A+ L + LL + +R+
Sbjct: 244 ---TAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRL 282
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 5/80 (6%)
Query: 274 PEDLSPDVAD----FISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAP 329
P L P++ + + LL KD +RLG + D E+K H FF++I+WDDL K+I P
Sbjct: 255 PLQLKPNITNSARHLLEGLLQKDRTKRLGAKD-DFMEIKSHVFFSLINWDDLINKKITPP 313
Query: 330 FVPKISNELDVSNFSDEFTK 349
F P +S D+ +F EFT+
Sbjct: 314 FNPNVSGPNDLRHFDPEFTE 333
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
Q+ RC F E A ++ +A+ ++HS +V+RDLKPEN+LL
Sbjct: 131 QRERC-FLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILL 172
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 119/282 (42%), Gaps = 49/282 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSE-EINLLRACQGH 430
D + +LG GS+ K T Q +A+K + + + +C+ E +L H
Sbjct: 19 DFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEH 78
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P + ++ C FQ + + + I+ + F + A+ +++ + F+H
Sbjct: 79 PFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLH 136
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQD 547
S+G+V+RDLK +N+L D G +IK+ DFG L + C T Y APE+L
Sbjct: 137 SKGIVYRDLKLDNILL-DKDG-HIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ 194
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
K Y+ + D WS GV+LY ML G+ PFH + ++
Sbjct: 195 K--------------------------YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELF 228
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
SI N W + EAK+L L P +R+
Sbjct: 229 HSIRMD------NPFYPRW--LEKEAKDLLVKLFVREPEKRL 262
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 4/90 (4%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ I P P L + D + +L V++P +RLG ++++HP F I+W++L
Sbjct: 228 FHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV----RGDIRQHPLFREINWEELE 283
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIP 352
K I PF PK+ + D SNF EF P
Sbjct: 284 RKEIDPPFRPKVKSPFDCSNFDKEFLNEKP 313
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F + A+ +++ + F+HS+G+V+RDLK +N+LL
Sbjct: 116 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 152
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 87.8 bits (216), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 50/275 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--------DCSEEINLLRACQGHPNIVNL 436
LG G ++ C + T + +A KI+ + + S EI++ R+ H ++V
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSL-AHQHVVGF 80
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
H F+D + + K R TE EA +RQ+V ++H V+H
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLEL--HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIH 138
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFAC---LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK NL ++ +K+ DFG A E C T Y APEVL
Sbjct: 139 RDLKLGNLFLNEDL--EVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVL--------- 187
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
K G+ D+WS+G I+YT+L G+ PF ++ L R
Sbjct: 188 -----------------SKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL----R 226
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
IK+ +++ ++ A L + +L +P R
Sbjct: 227 IKKNEYSIPKH----INPVAASLIQKMLQTDPTAR 257
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 913 QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
K R TE EA +RQ+V ++H V+HRDLK NL L+
Sbjct: 106 HKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN 149
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEEL 307
Y RI K E IP+ ++P A I ++L DP R EL +E
Sbjct: 224 YLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLNDEF 268
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 51/232 (21%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI+ L+ F D Y +++ + F E + + +L A+ +
Sbjct: 72 HPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSK--FDEQRTATYITELANALSYC 129
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-------TLQYAAPE 542
HS+ V+HRD+KPENLL AG+ +K+ DFG+ S+H P TL Y PE
Sbjct: 130 HSKRVIHRDIKPENLLLGS-AGE-LKIADFGW------SVHAPSSRRXXLXGTLDYLPPE 181
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
++ + +DE DLWSLGV+ C Y L G+ PF A +
Sbjct: 182 MI--EGRMHDEKVDLWSLGVL---------------C---------YEFLVGKPPFEANT 215
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
++ RI +F F V+ A++L LL NP+QR + V
Sbjct: 216 YQET----YKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREV 259
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
F E + + +L A+ + HS+ V+HRD+KPENLLL G +G L
Sbjct: 110 FDEQRTATYITELANALSYCHSKRVIHRDIKPENLLL-GSAGEL 152
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.7 bits (213), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 117/276 (42%), Gaps = 49/276 (17%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSE-EINLLRACQGHPNIVNL 436
+LG GS+ K T Q +A+K + + + +C+ E +L HP + ++
Sbjct: 24 MLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHM 83
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
C FQ + + + I+ + F + A+ +++ + F+HS+G+V+
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCHK--FDLSRATFYAAEIILGLQFLHSKGIVY 141
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
RDLK +N+L D G +IK+ DFG L + C T Y APE+L K
Sbjct: 142 RDLKLDNILL-DKDG-HIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQK----- 194
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
Y+ + D WS GV+LY ML G+ PFH + ++ SI
Sbjct: 195 ---------------------YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD 233
Query: 614 IKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
N W + EAK+L L P +R+
Sbjct: 234 ------NPFYPRW--LEKEAKDLLVKLFVREPEKRL 261
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
+ I P P L + D + +L V++P +RLG ++++HP F I+W++L
Sbjct: 227 FHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGV----RGDIRQHPLFREINWEELE 282
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPA 357
K I PF PK+ + D SNF EF P S A
Sbjct: 283 RKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSFA 317
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F + A+ +++ + F+HS+G+V+RDLK +N+LL
Sbjct: 115 FDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILL 151
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 86.3 bits (212), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 131/304 (43%), Gaps = 55/304 (18%)
Query: 359 VPPNFDKIFKGSLFFEQYDMDLDKAGIL---GDGSYSVCRRCVEKSTGQEYAVKIISRK- 414
+PP FD E D++ D IL G GS+ + T + YA+K ++++
Sbjct: 2 MPPVFD---------ENEDVNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQK 52
Query: 415 -IDCSEEINLLRACQ-----GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC 468
++ +E N+ + Q HP +VNL FQDE + ++Q
Sbjct: 53 CVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN--V 110
Query: 469 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRE 527
F E + +LV A+ ++ ++ ++HRD+KP+N+L + ++ + DF A L RE
Sbjct: 111 HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHG--HVHITDFNIAAMLPRE 168
Query: 528 S-LHTPCFTLQYAAPEVLRQDK-SGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
+ + T T Y APE+ K +GY D WSLGV +LR
Sbjct: 169 TQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLR---------------- 212
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
GR P+H RS S+ I+ + + + AW S E L K LL NP
Sbjct: 213 --------GRRPYHIRS-STSSKEIVHTFETTVVTYPS-AW---SQEMVSLLKKLLEPNP 259
Query: 646 AQRI 649
QR
Sbjct: 260 DQRF 263
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
R + F E + +LV A+ ++ ++ ++HRD+KP+N+LL
Sbjct: 103 RYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILL 148
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
Query: 274 PEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
P S ++ + +LL +P +R +++ P+ N I+WD + KR+ F+P
Sbjct: 240 PSAWSQEMVSLLKKLLEPNPDQRFS----QLSDVQNFPYMNDINWDAVFQKRLIPGFIP 294
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 115/282 (40%), Gaps = 49/282 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSEEINLLRACQGHP 431
D + +LG GS+ K T + YAVKI+ + + +C+ + A G P
Sbjct: 21 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 80
Query: 432 N-IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
+ LH FQ Y I+Q GR F E A ++ + F+
Sbjct: 81 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQ 138
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQD 547
S+G+++RDLK +N++ D G +IK+ DFG + C T Y APE++
Sbjct: 139 SKGIIYRDLKLDNVML-DSEG-HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 196
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
Y ++ D W + GV+LY ML G+ PF D+
Sbjct: 197 P--YGKSVDWW------------------------AFGVLLYEMLAGQAPFEGEDEDELF 230
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
SIM + ++S EA + K L+T +P +R+
Sbjct: 231 QSIMEH--------NVAYPKSMSKEAVAICKGLMTKHPGKRL 264
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
++ I++ P+ +S + L+ K P +RLG G ++K H FF IDW+ L
Sbjct: 230 FQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLE 289
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPN 362
K I P+ PK + NF FT+ P + PP+
Sbjct: 290 RKEIQPPYKPKACGR-NAENFDRFFTR----HPPVLXPPD 324
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I+Q GR F E A ++ + F+ S+G+++RDLK +N++L
Sbjct: 112 IQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 154
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 126/287 (43%), Gaps = 50/287 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-IDCSEEINLLRA-------CQGH 430
D D ++G GSY+ K T + YA++++ ++ ++ E+I+ ++ H
Sbjct: 53 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNH 112
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V LH FQ E + ++++ + E A ++ A++++H
Sbjct: 113 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLH 170
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQD 547
RG+++RDLK +N+L D G +IK+ D+G ++ T C T Y APE+LR +
Sbjct: 171 ERGIIYRDLKLDNVLL-DSEG-HIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGE 228
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD-- 605
G+ + D W+LGV+++ M+ GR PF D
Sbjct: 229 DYGF--------------------------SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 262
Query: 606 ---SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ + I E Q ++S +A + KS L +P +R+
Sbjct: 263 DQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERL 305
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLG-GGELDAEELKRHPFFNVIDWDDL 321
++ IL+ + IP LS A + L KDP+ RLG + +++ HPFF +DWD +
Sbjct: 271 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 330
Query: 322 ATKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFDKIFK 368
K++ PF P IS E + NF +FT + P + P+ D I +
Sbjct: 331 EQKQVVPPFKPNISGEFGLDNFDSQFT-----NEPVQLXPDDDDIVR 372
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A ++ A++++H RG+++RDLK +N+LL
Sbjct: 152 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 186
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 115/282 (40%), Gaps = 49/282 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-------DCSEEINLLRACQGHP 431
D + +LG GS+ K T + YAVKI+ + + +C+ + A G P
Sbjct: 342 DFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKP 401
Query: 432 N-IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
+ LH FQ Y I+Q GR F E A ++ + F+
Sbjct: 402 PFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGR--FKEPHAVFYAAEIAIGLFFLQ 459
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQD 547
S+G+++RDLK +N++ D G +IK+ DFG + C T Y APE++
Sbjct: 460 SKGIIYRDLKLDNVML-DSEG-HIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQ 517
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
Y ++ D W + GV+LY ML G+ PF D+
Sbjct: 518 P--YGKSVDWW------------------------AFGVLLYEMLAGQAPFEGEDEDELF 551
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
SIM + ++S EA + K L+T +P +R+
Sbjct: 552 QSIMEH--------NVAYPKSMSKEAVAICKGLMTKHPGKRL 585
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLA 322
++ I++ P+ +S + L+ K P +RLG G ++K H FF IDW+ L
Sbjct: 551 FQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLE 610
Query: 323 TKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPN 362
K I P+ PK S + NF FT+ P + PP+
Sbjct: 611 RKEIQPPYKPKASGR-NAENFDRFFTR----HPPVLXPPD 645
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I+Q GR F E A ++ + F+ S+G+++RDLK +N++L
Sbjct: 433 IQQVGR--FKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVML 475
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 46/278 (16%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-------KIDC-SEEINLL--RACQ 428
D + ++G G++ K+T + YA+KI+++ + C EE ++L CQ
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 134
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
I LH FQDE H Y + K E+ A + ++V A+
Sbjct: 135 W---ITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDS 190
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT-----PCFTLQYAAPEV 543
+H VHRD+KP+N+L +I++ DFG +CLK T T Y +PE+
Sbjct: 191 IHQLHYVHRDIKPDNVLLD--VNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 247
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L+ + G + Y CD WSLGV +Y ML G PF+A S
Sbjct: 248 LQAMEDGMGK---------------------YGPECDWWSLGVCMYEMLYGETPFYAESL 286
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLL 641
++ IM E +F F + + VS EAK+L + L+
Sbjct: 287 VETYGKIMNH--EERFQFPSHV-TDVSEEAKDLIQRLI 321
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 263 YRRILKTE-----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVID 317
Y +I+ E P D+S + D I RL+ RR G+ E+ K+H FF ++
Sbjct: 290 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRL---GQNGIEDFKKHAFFEGLN 346
Query: 318 WDDLATKRIPAPFVPKISNELDVSNF--SDEFTKMIPADSPAIVPPNFDKIFKG 369
W+++ + + AP++P +S+ D SNF D+ + + I+PP F G
Sbjct: 347 WENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLR-----NTEILPPGSHTGFSG 393
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E+ A + ++V A+ +H VHRD+KP+N+LL ++G++
Sbjct: 174 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLD-VNGHI 214
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/278 (28%), Positives = 123/278 (44%), Gaps = 46/278 (16%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-------KIDC-SEEINLL--RACQ 428
D + ++G G++ K+T + YA+KI+++ + C EE ++L CQ
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQ 150
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
I LH FQDE H Y + K E+ A + ++V A+
Sbjct: 151 W---ITALHYAFQDENHLYLVMDYYVGGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDS 206
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT-----PCFTLQYAAPEV 543
+H VHRD+KP+N+L +I++ DFG +CLK T T Y +PE+
Sbjct: 207 IHQLHYVHRDIKPDNVLLD--VNGHIRLADFG-SCLKMNDDGTVQSSVAVGTPDYISPEI 263
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L+ + G + Y CD WSLGV +Y ML G PF+A S
Sbjct: 264 LQAMEDGMGK---------------------YGPECDWWSLGVCMYEMLYGETPFYAESL 302
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLL 641
++ IM E +F F + + VS EAK+L + L+
Sbjct: 303 VETYGKIMNH--EERFQFPSHV-TDVSEEAKDLIQRLI 337
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 56/114 (49%), Gaps = 17/114 (14%)
Query: 263 YRRILKTE-----PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVID 317
Y +I+ E P D+S + D I RL+ RR G+ E+ K+H FF ++
Sbjct: 306 YGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRL---GQNGIEDFKKHAFFEGLN 362
Query: 318 WDDLATKRIPAPFVPKISNELDVSNF--SDEFTKMIPADSPAIVPPNFDKIFKG 369
W+++ + + AP++P +S+ D SNF D+ + + I+PP F G
Sbjct: 363 WENI--RNLEAPYIPDVSSPSDTSNFDVDDDVLR-----NTEILPPGSHTGFSG 409
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E+ A + ++V A+ +H VHRD+KP+N+LL
Sbjct: 190 EDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLL 224
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 50/287 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-IDCSEEINLLRA-------CQGH 430
D D ++G GSY+ K T + YA+K++ ++ ++ E+I+ ++ H
Sbjct: 6 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 65
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V LH FQ E + ++++ + E A ++ A++++H
Sbjct: 66 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNYLH 123
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQD 547
RG+++RDLK +N+L D G +IK+ D+G ++ C T Y APE+LR +
Sbjct: 124 ERGIIYRDLKLDNVLL-DSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 181
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD-- 605
G+ + D W+LGV+++ M+ GR PF D
Sbjct: 182 DYGF--------------------------SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 215
Query: 606 ---SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ + I E Q ++S +A + KS L +P +R+
Sbjct: 216 DQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERL 258
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLG-GGELDAEELKRHPFFNVIDWDDL 321
++ IL+ + IP LS A + L KDP+ RLG + +++ HPFF +DWD +
Sbjct: 224 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 283
Query: 322 ATKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFDKIFK 368
K++ PF P IS E + NF +FT + P + P+ D I +
Sbjct: 284 EQKQVVPPFKPNISGEFGLDNFDSQFT-----NEPVQLXPDDDDIVR 325
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A ++ A++++H RG+++RDLK +N+LL
Sbjct: 105 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 139
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 50/287 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-IDCSEEINLLRA-------CQGH 430
D D ++G GSY+ K T + YA+K++ ++ ++ E+I+ ++ H
Sbjct: 10 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 69
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V LH FQ E + ++++ + E A ++ A++++H
Sbjct: 70 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKL--PEEHARFYSAEISLALNYLH 127
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQD 547
RG+++RDLK +N+L D G +IK+ D+G ++ C T Y APE+LR +
Sbjct: 128 ERGIIYRDLKLDNVLL-DSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 185
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD-- 605
G+ + D W+LGV+++ M+ GR PF D
Sbjct: 186 DYGF--------------------------SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 219
Query: 606 ---SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ + I E Q ++S +A + KS L +P +R+
Sbjct: 220 DQNTEDYLFQVILEKQIRIP----RSLSVKAASVLKSFLNKDPKERL 262
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 56/107 (52%), Gaps = 6/107 (5%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLG-GGELDAEELKRHPFFNVIDWDDL 321
++ IL+ + IP LS A + L KDP+ RLG + +++ HPFF +DWD +
Sbjct: 228 FQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWDMM 287
Query: 322 ATKRIPAPFVPKISNELDVSNFSDEFTKMIPADSPAIVPPNFDKIFK 368
K++ PF P IS E + NF +FT + P + P+ D I +
Sbjct: 288 EQKQVVPPFKPNISGEFGLDNFDSQFT-----NEPVQLXPDDDDIVR 329
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A ++ A++++H RG+++RDLK +N+LL
Sbjct: 109 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 143
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-------SRKIDCSEEINLLRACQG--HPNIVNL 436
+G G+Y + + +G A+K + I E+ LLR + HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--------GFTENEASRIMRQLVAAVHF 488
D T + + Q R G +MRQ + + F
Sbjct: 72 ----MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVLRQ 546
+H+ +VHRDLKPEN+L + +G +K+ DFG A + + +L TL Y APEVL Q
Sbjct: 128 LHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQ 185
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
S Y D+WS+G I + R+ K + N + LG I L G P RD S
Sbjct: 186 --STYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFD--LIGLPPEDDWPRDVS 240
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKS-------LLTVNPAQRIRMMR 653
+ G F V S E+ +S +LT NP +RI R
Sbjct: 241 -------LPRGA--FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 285
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
G +MRQ + + F+H+ +VHRDLKPEN+L++ SG +K+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKL 153
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 125/287 (43%), Gaps = 50/287 (17%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-IDCSEEINLLRA-------CQGH 430
D D ++G GSY+ K T + YA+K++ ++ ++ E+I+ ++ H
Sbjct: 21 DFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNH 80
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
P +V LH FQ E + ++++ + E A ++ A++++H
Sbjct: 81 PFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRK--LPEEHARFYSAEISLALNYLH 138
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTPCFTLQYAAPEVLRQD 547
RG+++RDLK +N+L D G +IK+ D+G ++ C T Y APE+LR +
Sbjct: 139 ERGIIYRDLKLDNVLL-DSEG-HIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGE 196
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD-- 605
G+ + D W+LGV+++ M+ GR PF D
Sbjct: 197 DYGF--------------------------SVDWWALGVLMFEMMAGRSPFDIVGSSDNP 230
Query: 606 ---SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ + I E Q ++S +A + KS L +P +R+
Sbjct: 231 DQNTEDYLFQVILEKQIRIP----RSMSVKAASVLKSFLNKDPKERL 273
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 263 YRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGG-GELDAEELKRHPFFNVIDWDDL 321
++ IL+ + IP +S A + L KDP+ RLG + +++ HPFF +DWD +
Sbjct: 239 FQVILEKQIRIPRSMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFFRNVDWDMM 298
Query: 322 ATKRIPAPFVPKISNELDVSNFSDEFT 348
K++ PF P IS E + NF +FT
Sbjct: 299 EQKQVVPPFKPNISGEFGLDNFDSQFT 325
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 24/35 (68%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A ++ A++++H RG+++RDLK +N+LL
Sbjct: 120 EEHARFYSAEISLALNYLHERGIIYRDLKLDNVLL 154
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 121/294 (41%), Gaps = 46/294 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-------SRKIDCSEEINLLRACQG--HPNIVNL 436
+G G+Y + + +G A+K + I E+ LLR + HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--------GFTENEASRIMRQLVAAVHF 488
D T + + Q R G +MRQ + + F
Sbjct: 72 ----MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVLRQ 546
+H+ +VHRDLKPEN+L + +G +K+ DFG A + + +L TL Y APEVL Q
Sbjct: 128 LHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQ 185
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
S Y D+WS+G I + R+ K + N + LG I L G P RD S
Sbjct: 186 --STYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFD--LIGLPPEDDWPRDVS 240
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKS-------LLTVNPAQRIRMMR 653
+ G F V S E+ +S +LT NP +RI R
Sbjct: 241 -------LPRGA--FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 285
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
G +MRQ + + F+H+ +VHRDLKPEN+L++ SG +K+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKL 153
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 121/292 (41%), Gaps = 42/292 (14%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-------SRKIDCSEEINLLRACQG--HPNIVNL 436
+G G+Y + + +G A+K + I E+ LLR + HPN+V L
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--------GFTENEASRIMRQLVAAVHF 488
D T + + Q R G +MRQ + + F
Sbjct: 72 ----MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDF 127
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEVLRQ 546
+H+ +VHRDLKPEN+L + +G +K+ DFG A + + +L TL Y APEVL Q
Sbjct: 128 LHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQ 185
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
S Y D+WS+G I + R+ K + N + LG I L G P RD S
Sbjct: 186 --STYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFD--LIGLPPEDDWPRDVS 240
Query: 607 ALSIMARIKEGQF-NFDAEAWSTVSSEAKE----LTKSLLTVNPAQRIRMMR 653
+ G F +V E +E L +LT NP +RI R
Sbjct: 241 -------LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 285
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
G +MRQ + + F+H+ +VHRDLKPEN+L++ SG +K+
Sbjct: 108 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKL 153
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 121/297 (40%), Gaps = 49/297 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII----------SRKIDCSEEINLLRACQG--HPNI 433
+G G+Y + + +G A+K + I E+ LLR + HPN+
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--------GFTENEASRIMRQLVAA 485
V L D T + + Q R G +MRQ +
Sbjct: 77 VRL----MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRG 132
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL--KRESLHTPCFTLQYAAPEV 543
+ F+H+ +VHRDLKPEN+L + +G +K+ DFG A + + +L TL Y APEV
Sbjct: 133 LDFLHANCIVHRDLKPENILVT--SGGTVKLADFGLARIYSYQMALTPVVVTLWYRAPEV 190
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSR 603
L Q S Y D+WS+G I + R+ K + N + LG I L G P R
Sbjct: 191 LLQ--STYATPVDMWSVGCIFAEMFRR-KPLFCGNSEADQLGKIFD--LIGLPPEDDWPR 245
Query: 604 DDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKS-------LLTVNPAQRIRMMR 653
D S + G F V S E+ +S +LT NP +RI R
Sbjct: 246 DVS-------LPRGA--FPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFR 293
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
G +MRQ + + F+H+ +VHRDLKPEN+L++ SG +K+
Sbjct: 116 GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT--SGGTVKL 161
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 96/200 (48%), Gaps = 20/200 (10%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNI 433
+K G +G+GSY V +C + TGQ A+K D EI +L+ + HPN+
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNL 64
Query: 434 VNLHCVFQDE--VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
VNL VF+ + +H DR ++ G E+ I Q + AV+F H
Sbjct: 65 VNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHK 120
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDK 548
+HRD+KPEN+L + + IK+ DFGFA L + T Y +PE+L D
Sbjct: 121 HNCIHRDVKPENILITKHS--VIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGD- 177
Query: 549 SGYDENCDLWSLGVILVNVL 568
+ Y D+W++G + +L
Sbjct: 178 TQYGPPVDVWAIGCVFAELL 197
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G E+ I Q + AV+F H +HRD+KPEN+L++
Sbjct: 98 GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT 136
Score = 32.7 bits (73), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 119 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNI 171
+K G +G+GSY V +C + TGQ A+K D EI +L+ + HPN+
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLK-HPNL 64
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 99/212 (46%), Gaps = 21/212 (9%)
Query: 373 FEQYDMDLDK------AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEI 421
+E DLD G LGDG++ + K TG A K+I K D EI
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQ 481
+L C HP IV L + + + D I + G TE + + RQ
Sbjct: 68 EILATCD-HPYIVKLLGAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQ 125
Query: 482 LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH---TPCFTLQY 538
++ A++F+HS+ ++HRDLK N+L + GD I++ DFG + ++L + T +
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMT-LEGD-IRLADFGVSAKNLKTLQKRDSFIGTPYW 183
Query: 539 AAPEVLR---QDKSGYDENCDLWSLGVILVNV 567
APEV+ + YD D+WSLG+ L+ +
Sbjct: 184 MAPEVVMCETMKDTPYDYKADIWSLGITLIEM 215
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G TE + + RQ++ A++F+HS+ ++HRDLK N+L++
Sbjct: 113 GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 151
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 31/74 (41%), Gaps = 12/74 (16%)
Query: 111 FEQYDMDLDK------AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEI 159
+E DLD G LGDG++ + K TG A K+I K D EI
Sbjct: 8 YEHVRRDLDPNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEI 67
Query: 160 NLLRACQGHPNICR 173
+L C HP I +
Sbjct: 68 EILATCD-HPYIVK 80
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 383 AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLH 437
G LGDG++ + K TG A K+I K D EI +L C HP IV L
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-HPYIVKLL 74
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
+ + + D I + G TE + + RQ++ A++F+HS+ ++HR
Sbjct: 75 GAYYHDGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHR 133
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRESLH---TPCFTLQYAAPEVLR---QDKSGY 551
DLK N+L + GD I++ DFG + ++L + T + APEV+ + Y
Sbjct: 134 DLKAGNVLMT-LEGD-IRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPY 191
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDEN 578
D D+WSLG+ L+ + + + ++ N
Sbjct: 192 DYKADIWSLGITLIEMAQIEPPHHELN 218
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 29/39 (74%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G TE + + RQ++ A++F+HS+ ++HRDLK N+L++
Sbjct: 105 GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT 143
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 121 AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNICR 173
G LGDG++ + K TG A K+I K D EI +L C HP I +
Sbjct: 16 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-HPYIVK 72
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y ++K +G++ A+K +SR E+ LL+ Q H N++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLD 90
Query: 439 VFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D + G F+E + ++ Q++ + ++HS GVVH
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMG-LKFSEEKIQYLVYQMLKGLKYIHSAGVVH 149
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ +K++DFG A + T Y APEV+ Y++ D
Sbjct: 150 RDLKPGNLAVNEDC--ELKILDFGLARHADAEMTGYVVTRWYRAPEVIL-SWMHYNQTVD 206
Query: 557 LWSLGVILVNVL 568
+WS+G I+ +L
Sbjct: 207 IWSVGCIMAEML 218
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
F+E + ++ Q++ + ++HS GVVHRDLKP NL
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL 157
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 124/287 (43%), Gaps = 52/287 (18%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINL-------LRACQGHP 431
D + LG G + EK + A+K++ + E + ++A HP
Sbjct: 24 DFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHP 83
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NI+ L+ F D Y +++ C F E + IM +L A+ + H
Sbjct: 84 NILRLYNYFYDRRRIYLILEYAPRGELYKELQKS--CTFDEQRTATIMEELADALMYCHG 141
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC----LKRESLHTPCFTLQYAAPEVLRQD 547
+ V+HRD+KPENLL I DFG++ L+R+++ C TL Y PE++ +
Sbjct: 142 KKVIHRDIKPENLLLGLKGELKI--ADFGWSVHAPSLRRKTM---CGTLDYLPPEMI--E 194
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSA 607
++E DLW +GV+ C Y +L G PF + S +++
Sbjct: 195 GRMHNEKVDLWCIGVL---------------C---------YELLVGNPPFESASHNET- 229
Query: 608 LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRV 654
RI + F A +V + A++L LL NP++R+ + +V
Sbjct: 230 ---YRRIVKVDLKFPA----SVPTGAQDLISKLLRHNPSERLPLAQV 269
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 917 CGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 952
C F E + IM +L A+ + H + V+HRD+KPEN
Sbjct: 118 CTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 14/192 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y ++K +G++ A+K +SR E+ LL+ Q H N++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQ-HENVIGLLD 108
Query: 439 VFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D + G F+E + ++ Q++ + ++HS GVVH
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMG-MEFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ +K++DFG A + T Y APEV+ Y++ D
Sbjct: 168 RDLKPGNLAVNEDC--ELKILDFGLARHADAEMTGYVVTRWYRAPEVIL-SWMHYNQTVD 224
Query: 557 LWSLGVILVNVL 568
+WS+G I+ +L
Sbjct: 225 IWSVGCIMAEML 236
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
F+E + ++ Q++ + ++HS GVVHRDLKP NL
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL 175
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 79.0 bits (193), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NIV L V E Y D + G + QL+ + F HS
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFLHQDLK-DFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 121
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQD 547
V+HRDLKPENLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 HRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEILLGC 178
Query: 548 KSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 KY-YSTAVDIWSLGCIFAEMV 198
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKPENLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPENLLIN 137
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ + +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 78.6 bits (192), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 94/195 (48%), Gaps = 15/195 (7%)
Query: 384 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHC 438
G LGDG++ + K T A K+I K D EI++L +C HPNIV L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLD 101
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F E + + D + + TE++ + +Q + A++++H ++HRD
Sbjct: 102 AFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLH---TPCFTLQYAAPEVLRQDKSG---YD 552
LK N+LF+ +IK+ DFG + ++ + T + APEV+ + S YD
Sbjct: 161 LKAGNILFT--LDGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 553 ENCDLWSLGVILVNV 567
D+WSLG+ L+ +
Sbjct: 219 YKADVWSLGITLIEM 233
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE++ + +Q + A++++H ++HRDLK N+L +
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT 169
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 122 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNICR 173
G LGDG++ + K T A K+I K D EI++L +C HPNI +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVK 98
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 125/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR 143
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ + +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 144 DLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 199
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NIV L V E Y D + G + QL+ + F HS
Sbjct: 66 NIVKLLDVIHTENKLYLVFEFLSMDLK-DFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 124
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQD 547
V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 125 HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEILLGC 181
Query: 548 KSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 182 KY-YSTAVDIWSLGCIFAEMV 201
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 126/311 (40%), Gaps = 79/311 (25%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKI------------------------------ 415
+G GSY V + ++ YA+K++S+K
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPI 80
Query: 416 -DCSEEINLLRACQGHPNIVNLHCVFQD--EVHTYXXXXXXXXXXXXDRIRQKGRCGFTE 472
+EI +L+ HPN+V L V D E H Y + K +E
Sbjct: 81 EQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKP---LSE 136
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-------CLK 525
++A + L+ + ++H + ++HRD+KP NLL + +IK+ DFG + L
Sbjct: 137 DQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDG--HIKIADFGVSNEFKGSDALL 194
Query: 526 RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++ TP F APE L + + + SG + D+W++G
Sbjct: 195 SNTVGTPAFM----APESLSETRKIF---------------------SG--KALDVWAMG 227
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY + G+ PF D+ + + ++IK F + ++ + K+L +L NP
Sbjct: 228 VTLYCFVFGQCPF----MDERIMCLHSKIKSQALEFPDQP--DIAEDLKDLITRMLDKNP 281
Query: 646 AQRIRMMRVKL 656
RI + +KL
Sbjct: 282 ESRIVVPEIKL 292
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+E++A + L+ + ++H + ++HRD+KP NLL+
Sbjct: 134 LSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/201 (31%), Positives = 86/201 (42%), Gaps = 17/201 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 64
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
NIV L V E Y D + G + QL+ + F HS
Sbjct: 65 NIVKLLDVIHTENKLYLVFEFLSMDLK-DFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 123
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQD 547
V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 124 HRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEILLGC 180
Query: 548 KSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 181 KY-YSTAVDIWSLGCIFAEMV 200
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 139
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 47/288 (16%)
Query: 375 QYDMDLDKAG---ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRA 426
+YD + D+ G +LG G+Y + + S A+K I + EEI L +
Sbjct: 16 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 75
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK-GRCGFTENEASRIMRQLVAA 485
+ H NIV F + +R K G E +Q++
Sbjct: 76 LK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 134
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAA 540
+ ++H +VHRD+K +N+L + +G +K+ DFG + KR + PC TLQY A
Sbjct: 135 LKYLHDNQIVHRDIKGDNVLINTYSG-VLKISDFGTS--KRLAGINPCTETFTGTLQYMA 191
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHA 600
PE++ + GY + D+WSLG ++ M G+ PF+
Sbjct: 192 PEIIDKGPRGYGKAADIWSLGCTIIE------------------------MATGKPPFYE 227
Query: 601 RSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
+A+ K G F E ++S+EAK +P +R
Sbjct: 228 LGEPQAAM-----FKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 270
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 929 RQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+Q++ + ++H +VHRD+K +N+L++ SG L
Sbjct: 129 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 162
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 117/288 (40%), Gaps = 47/288 (16%)
Query: 375 QYDMDLDKAG---ILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-----CSEEINLLRA 426
+YD + D+ G +LG G+Y + + S A+K I + EEI L +
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK-GRCGFTENEASRIMRQLVAA 485
+ H NIV F + +R K G E +Q++
Sbjct: 62 LK-HKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEG 120
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAA 540
+ ++H +VHRD+K +N+L + +G +K+ DFG + KR + PC TLQY A
Sbjct: 121 LKYLHDNQIVHRDIKGDNVLINTYSG-VLKISDFGTS--KRLAGINPCTETFTGTLQYMA 177
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHA 600
PE++ + GY + D+WSLG ++ M G+ PF+
Sbjct: 178 PEIIDKGPRGYGKAADIWSLGCTIIE------------------------MATGKPPFYE 213
Query: 601 RSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
+A+ K G F E ++S+EAK +P +R
Sbjct: 214 LGEPQAAM-----FKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKR 256
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 24/34 (70%)
Query: 929 RQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+Q++ + ++H +VHRD+K +N+L++ SG L
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVL 148
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEI 421
G L ++ + K +G+G+Y V + K TG+ A+K I + EI
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI--- 478
+LL+ HPNIV L D +HT D + T I
Sbjct: 61 SLLKELN-HPNIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 115
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCF 534
+ QL+ + F HS V+HRDLKP+NLL + IK+ DFG F R H
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VV 172
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
TL Y APE+L K Y D+WSLG I ++
Sbjct: 173 TLWYRAPEILLGXKY-YSTAVDIWSLGCIFAEMV 205
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 144
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 382 KAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCV 439
KA L +G V + V TG+E + E+ +LR + HPN+V L V
Sbjct: 29 KARDLKNGGRFVALKRVRVQTGEE------GMPLSTIREVAVLRHLETFEHPNVVRLFDV 82
Query: 440 F-------QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ ++ D++ + G T + +M QL+ + F+HS
Sbjct: 83 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHSH 139
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESLHTPCFTLQYAAPEVLRQDKSG 550
VVHRDLKP+N+L + + IK+ DFG A + + +L + TL Y APEVL Q S
Sbjct: 140 RVVHRDLKPQNILVT--SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SS 195
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
Y DLWS+G I + R+ K + + D+ LG IL + +P D AL
Sbjct: 196 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVI---GLPGEEDWPRDVALP- 250
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSL----LTVNPAQRI 649
++ + A+ ++ EL K L LT NPA+RI
Sbjct: 251 ----RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+M QL+ + F+HS VVHRDLKP+N+L++ SG +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQI 159
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 382 KAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCV 439
KA L +G V + V TG+E + E+ +LR + HPN+V L V
Sbjct: 29 KARDLKNGGRFVALKRVRVQTGEE------GMPLSTIREVAVLRHLETFEHPNVVRLFDV 82
Query: 440 F-------QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ ++ D++ + G T + +M QL+ + F+HS
Sbjct: 83 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHSH 139
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESLHTPCFTLQYAAPEVLRQDKSG 550
VVHRDLKP+N+L + + IK+ DFG A + + +L + TL Y APEVL Q S
Sbjct: 140 RVVHRDLKPQNILVT--SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SS 195
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
Y DLWS+G I + R+ K + + D+ LG IL + +P D AL
Sbjct: 196 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVI---GLPGEEDWPRDVALP- 250
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSL----LTVNPAQRI 649
++ + A+ ++ EL K L LT NPA+RI
Sbjct: 251 ----RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+M QL+ + F+HS VVHRDLKP+N+L++ SG +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQI 159
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 93/195 (47%), Gaps = 15/195 (7%)
Query: 384 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHC 438
G LGDG++ + K T A K+I K D EI++L +C HPNIV L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLD 101
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F E + + D + + TE++ + +Q + A++++H ++HRD
Sbjct: 102 AFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLH---TPCFTLQYAAPEVLRQDKSG---YD 552
LK N+LF+ +IK+ DFG + + + T + APEV+ + S YD
Sbjct: 161 LKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 553 ENCDLWSLGVILVNV 567
D+WSLG+ L+ +
Sbjct: 219 YKADVWSLGITLIEM 233
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE++ + +Q + A++++H ++HRDLK N+L +
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT 169
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 122 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNICR 173
G LGDG++ + K T A K+I K D EI++L +C HPNI +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVK 98
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 66 NIVKL----LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKPENLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 CHSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 LGCKY-YSTAVDIWSLGCIFAEMV 201
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKPENLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPENLLIN 140
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 63
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 64 NIVKL----LDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKPENLL + IK+ DFG F R H TL Y APE+L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 177 LGCKY-YSTAVDIWSLGCIFAEMV 199
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKPENLL++
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLIN 138
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/283 (29%), Positives = 127/283 (44%), Gaps = 37/283 (13%)
Query: 382 KAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCV 439
KA L +G V + V TG+E + E+ +LR + HPN+V L V
Sbjct: 29 KARDLKNGGRFVALKRVRVQTGEE------GMPLSTIREVAVLRHLETFEHPNVVRLFDV 82
Query: 440 F-------QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ ++ D++ + G T + +M QL+ + F+HS
Sbjct: 83 CTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD---MMFQLLRGLDFLHSH 139
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK--RESLHTPCFTLQYAAPEVLRQDKSG 550
VVHRDLKP+N+L + + IK+ DFG A + + +L + TL Y APEVL Q S
Sbjct: 140 RVVHRDLKPQNILVT--SSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQ--SS 195
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
Y DLWS+G I + R+ K + + D+ LG IL + +P D AL
Sbjct: 196 YATPVDLWSVGCIFAEMFRR-KPLFRGSSDVDQLGKILDVI---GLPGEEDWPRDVALP- 250
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSL----LTVNPAQRI 649
++ + A+ ++ EL K L LT NPA+RI
Sbjct: 251 ----RQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI 289
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
+M QL+ + F+HS VVHRDLKP+N+L++ SG +
Sbjct: 125 MMFQLLRGLDFLHSHRVVHRDLKPQNILVTS-SGQI 159
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGXKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 64
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 65 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKPENLL + IK+ DFG F R H TL Y APE+L
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 177
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 178 LGCKY-YSTAVDIWSLGCIFAEMV 200
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKPENLL++
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPENLLIN 139
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 63
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 64 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKPENLL + IK+ DFG F R H TL Y APE+L
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 177 LGCKY-YSTAVDIWSLGCIFAEMV 199
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKPENLL++
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPENLLIN 138
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 92/195 (47%), Gaps = 15/195 (7%)
Query: 384 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHC 438
G LGDG++ + K T A K+I K D EI++L +C HPNIV L
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLD 101
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F E + + D + + TE++ + +Q + A++++H ++HRD
Sbjct: 102 AFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 160
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLH---TPCFTLQYAAPEVLRQDKSG---YD 552
LK N+LF+ +IK+ DFG + + T + APEV+ + S YD
Sbjct: 161 LKAGNILFT--LDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYD 218
Query: 553 ENCDLWSLGVILVNV 567
D+WSLG+ L+ +
Sbjct: 219 YKADVWSLGITLIEM 233
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE++ + +Q + A++++H ++HRDLK N+L +
Sbjct: 132 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT 169
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 122 GILGDGSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNICR 173
G LGDG++ + K T A K+I K D EI++L +C HPNI +
Sbjct: 43 GELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVK 98
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 92/214 (42%), Gaps = 23/214 (10%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEI 421
G L ++ + K +G+G+Y V + K TG+ A+K I + EI
Sbjct: 1 GPLGSPEFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREI 60
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI--- 478
+LL+ HPNIV L D +HT D + T I
Sbjct: 61 SLLKELN-HPNIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSY 115
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCF 534
+ QL+ + F HS V+HRDLKP+NLL + IK+ DFG F R H
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VV 172
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
TL Y APE+L K Y D+WSLG I ++
Sbjct: 173 TLWYRAPEILLGCKY-YSTAVDIWSLGCIFAEMV 205
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 116 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 144
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV-NHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ + +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 76.3 bits (186), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 113/275 (41%), Gaps = 40/275 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHP 431
D + ++G G++ K+ + +A+KI+++ + C E +
Sbjct: 75 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSK 134
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
I LH FQD+ + Y + K E A + ++V A+ +H
Sbjct: 135 WITTLHYAFQDDNNLYLVMDYYVGGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQ 193
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT-----PCFTLQYAAPEVLRQ 546
VHRD+KP+N+L +I++ DFG +CLK T T Y +PE+L+
Sbjct: 194 LHYVHRDIKPDNILMD--MNGHIRLADFG-SCLKLMEDGTVQSSVAVGTPDYISPEILQA 250
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
+ G K Y CD WSLGV +Y ML G PF+A S ++
Sbjct: 251 MEGG---------------------KGRYGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
Query: 607 ALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLL 641
IM + QF + VS AK+L + L+
Sbjct: 290 YGKIMNHKERFQFPTQV---TDVSENAKDLIRRLI 321
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 271 PPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPF 330
P D+S + D I RL+ R G+ E+ K+HPFF+ IDWD++ + AP+
Sbjct: 303 PTQVTDVSENAKDLIRRLICSREHRL---GQNGIEDFKKHPFFSGIDWDNI--RNCEAPY 357
Query: 331 VPKISNELDVSNF 343
+P++S+ D SNF
Sbjct: 358 IPEVSSPTDTSNF 370
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 22/35 (62%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E A + ++V A+ +H VHRD+KP+N+L+
Sbjct: 174 EEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILM 208
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 118/299 (39%), Gaps = 58/299 (19%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-----------KIDCSEEIN 422
E ++ + +LG G + + + A+K+I R + C E+
Sbjct: 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVA 86
Query: 423 LLR---ACQGHPNIVNLHCVFQ-DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
LL A GHP ++ L F+ E D I +KG G E +
Sbjct: 87 LLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLG--EGPSRCF 144
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC-FTLQ 537
Q+VAA+ HSRGVVHRD+K EN+L G K++DFG L + +T T
Sbjct: 145 FGQVVAAIQHCHSRGVVHRDIKDENILIDLRRG-CAKLIDFGSGALLHDEPYTDFDGTRV 203
Query: 538 YAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVP 597
Y+ PE + + + + +WSLG++LY M+CG +P
Sbjct: 204 YSPPEWISRHQY-------------------------HALPATVWSLGILLYDMVCGDIP 238
Query: 598 FHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKL 656
F RD L E + +F A VS + L + L P+ R + + L
Sbjct: 239 F---ERDQEIL-------EAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILL 283
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I +KG G E + Q+VAA+ HSRGVVHRD+K EN+L+
Sbjct: 128 DYITEKGPLG--EGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILI 172
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 64
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 65 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 177
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 178 LGCKY-YSTAVDIWSLGCIFAEMV 200
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 139
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLSFCHSHRVLHRDLKPQNLLIN 137
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 89
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 90 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 149
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 150 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 205
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 206 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 264
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 265 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 309
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 84
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 145 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 200
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 66 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 LGCKY-YSTAVDIWSLGCIFAEMV 201
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 66 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 LGCKY-YSTAVDIWSLGCIFAEMV 201
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 6 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 64
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 65 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 120
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 177
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 178 LGCKY-YSTAVDIWSLGCIFAEMV 200
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 111 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 139
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 63
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 64 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 177 LGCKY-YSTAVDIWSLGCIFAEMV 199
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 138
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 91
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 152 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 207
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 91
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 92 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 152 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 207
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 208 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 266
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 267 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 311
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 83
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 84 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 143
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 144 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 199
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 200 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 258
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 259 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 303
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 152
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 128
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 189 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 244
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 84
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 85 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 145 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 200
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 201 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 259
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 260 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 304
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 63
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 64 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 177 LGCKY-YSTAVDIWSLGCIFAEMV 199
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 138
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 90/207 (43%), Gaps = 24/207 (11%)
Query: 377 DMD-LDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQ 428
DM+ K +G+G+Y V + K TG+ A+K I + EI+LL+
Sbjct: 5 DMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAA 485
HPNIV L D +HT D + T I + QL+
Sbjct: 65 -HPNIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQG 119
Query: 486 VHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAP 541
+ F HS V+HRDLKP+NLL + IK+ DFG F R H TL Y AP
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAP 176
Query: 542 EVLRQDKSGYDENCDLWSLGVILVNVL 568
E+L K Y D+WSLG I ++
Sbjct: 177 EILLGCKY-YSTAVDIWSLGCIFAEMV 202
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 141
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 66
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 67 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 122
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 179
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 180 LGCKY-YSTAVDIWSLGCIFAEMV 202
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 113 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 141
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 63
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 64 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 119
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 177 LGCKY-YSTAVDIWSLGCIFAEMV 199
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 110 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 138
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 66 NIVKL----LDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 LGCKY-YSTAVDIWSLGCIFAEMV 201
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI+ L
Sbjct: 32 IGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV-NHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ A +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDA--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+GVI+ +++
Sbjct: 207 DIWSVGVIMGEMIK 220
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 20/197 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGHPNIVNLH 437
LG+G+Y+ + + K+TG A+K + K+D E EI+L++ + H NIV L+
Sbjct: 13 LGNGTYATVYKGLNKTTGVYVALKEV--KLDSEEGTPSTAIREISLMKELK-HENIVRLY 69
Query: 438 CVFQDE---VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
V E + R G N QL+ + F H +
Sbjct: 70 DVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKI 129
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQDKSGY 551
+HRDLKP+NLL + +K+ DFG A + + + TL Y AP+VL ++ Y
Sbjct: 130 LHRDLKPQNLLINKRG--QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRT-Y 186
Query: 552 DENCDLWSLGVILVNVL 568
+ D+WS G IL ++
Sbjct: 187 STSIDIWSCGCILAEMI 203
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G N QL+ + F H ++HRDLKP+NLL++
Sbjct: 104 GLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 7 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 65
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDR---IRQKGRCGFTENEASRIMRQLVAAVHF 488
NIV L D +HT D + G + QL+ + F
Sbjct: 66 NIVKL----LDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 121
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYXHE-VVTLWYRAPEIL 178
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 179 LGCKY-YSTAVDIWSLGCIFAEMV 201
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 112 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 140
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+K I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDR---IRQKGRCGFTENEASRIMRQLVAAVHF 488
NIV L D +HT D + G + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI++L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIISLLN 128
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 129 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 188
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 189 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 244
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 245 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 303
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 304 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV-NHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ + +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 118/273 (43%), Gaps = 14/273 (5%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHPNIVNLHC 438
+G G+Y V+ TG + A+K + R E+ LL+ + H N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMR-HENVIGLLD 91
Query: 439 VF--QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + + D + E+ ++ Q++ + ++H+ G++H
Sbjct: 92 VFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGIIH 151
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ +K++DFG A + T Y APEV+ + Y + D
Sbjct: 152 RDLKPGNLAVNEDC--ELKILDFGLARQADSEMXGXVVTRWYRAPEVI-LNWMRYTQTVD 208
Query: 557 LWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKE 616
+WS+G I+ ++ K+ + + L L I+ F R + D A + M + E
Sbjct: 209 IWSVGCIMAEMI-TGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPE 267
Query: 617 GQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ A + S A L + +L ++ QR+
Sbjct: 268 LEKKDFASILTNASPLAVNLLEKMLVLDAEQRV 300
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
E+ ++ Q++ + ++H+ G++HRDLKP NL
Sbjct: 127 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL 159
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 74.7 bits (182), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 95/209 (45%), Gaps = 17/209 (8%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEIN 422
+L+F+ + + G++G+GSY + +C K TG+ A+K D EI
Sbjct: 18 NLYFQSME-KYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIK 76
Query: 423 LLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
LL+ + H N+VNL V + + Y D + G + + Q+
Sbjct: 77 LLKQLR-HENLVNLLEVCKKKKRWYLVFEFVDHTILDDL--ELFPNGLDYQVVQKYLFQI 133
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYA 539
+ + F HS ++HRD+KPEN+L S +K+ DFGFA E T Y
Sbjct: 134 INGIGFCHSHNIIHRDIKPENILVSQSG--VVKLCDFGFARTLAAPGEVYDDEVATRWYR 191
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVL 568
APE+L D Y + D+W++G ++ +
Sbjct: 192 APELLVGDVK-YGKAVDVWAIGCLVTEMF 219
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G + + Q++ + F HS ++HRD+KPEN+L+S
Sbjct: 120 GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS 158
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 108 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVK 147
+L+F+ + + G++G+GSY + +C K TG+ A+K
Sbjct: 18 NLYFQSME-KYENLGLVGEGSYGMVMKCRNKDTGRIVAIK 56
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 18/191 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE---EINLLRACQGHPNIVNLHCVFQD 442
LG+GSY + + K TGQ A+K + + D E EI++++ C P++V + +
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDS-PHVVKYYGSYFK 95
Query: 443 EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPE 502
+ D IR + + TE+E + I++ + + ++H +HRD+K
Sbjct: 96 NTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAG 154
Query: 503 NLLFSDPAGDNIKVVDFGFA------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
N+L + + K+ DFG A KR + F + APEV+++ GY+ D
Sbjct: 155 NILLNTEG--HAKLADFGVAGQLTDXMAKRNXVIGTPF---WMAPEVIQE--IGYNCVAD 207
Query: 557 LWSLGVILVNV 567
+WSLG+ + +
Sbjct: 208 IWSLGITAIEM 218
Score = 33.5 bits (75), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 3/45 (6%)
Query: 124 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE---EINLLRAC 165
LG+GSY + + K TGQ A+K + + D E EI++++ C
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQC 81
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GI 958
D IR + + TE+E + I++ + + ++H +HRD+K N+LL+ G+
Sbjct: 113 DIIRLRNKT-LTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGV 171
Query: 959 SGNL 962
+G L
Sbjct: 172 AGQL 175
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/276 (26%), Positives = 115/276 (41%), Gaps = 40/276 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR-------KIDCSEEINLLRACQGHP 431
D + ++G G++S K TGQ YA+KI+++ ++ C E +
Sbjct: 62 DFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRR 121
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI-MRQLVAAVHFMH 490
I LH FQDE + Y + + G E +R + ++V A+ +H
Sbjct: 122 WITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGER--IPAEMARFYLAEIVMAIDSVH 179
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT-----PCFTLQYAAPEVLR 545
G VHRD+KP+N+L D G +I++ DFG +CLK + T T Y +PE+L+
Sbjct: 180 RLGYVHRDIKPDNILL-DRCG-HIRLADFG-SCLKLRADGTVRSLVAVGTPDYLSPEILQ 236
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
Y CD W+LGV Y M G+ PF+A S +
Sbjct: 237 AVGG-------------------GPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAE 277
Query: 606 SALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLL 641
+ I+ + E V EA++ + LL
Sbjct: 278 TYGKIVHYKEHLSLPLVDEG---VPEEARDFIQRLL 310
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 44/94 (46%), Gaps = 9/94 (9%)
Query: 261 IQYRRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDD 320
+ Y+ L P + E + + DFI RLL P RLG G A + + HPFF +DWD
Sbjct: 283 VHYKEHLSL-PLVDEGVPEEARDFIQRLLCP-PETRLGRG--GAGDFRTHPFFFGLDWDG 338
Query: 321 LATKRIPAPFVPKISNELDVSNF---SDEFTKMI 351
L +P PF P D NF D T M+
Sbjct: 339 L-RDSVP-PFTPDFEGATDTCNFDLVEDGLTAMV 370
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 924 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
A + ++V A+ +H G VHRD+KP+N+LL
Sbjct: 164 ARFYLAEIVMAIDSVHRLGYVHRDIKPDNILL 195
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/289 (26%), Positives = 117/289 (40%), Gaps = 69/289 (23%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHPNIVNLHC 438
LG G+Y + + +++ TG+ AVK I S EI +L GH NIVNL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 439 VFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTE-NEASRIMRQLVAAVHFMHSRGVV 495
V + ++ Y + R E ++ QL+ + ++HS G++
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLL 131
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTP------------------- 532
HRD+KP N+L + A ++KV DFG F ++R + + P
Sbjct: 132 HRDMKPSNILLN--AECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTD 189
Query: 533 -CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTM 591
T Y APE+L LG + Y + D+WSLG IL +
Sbjct: 190 YVATRWYRAPEIL---------------LG----------STKYTKGIDMWSLGCILGEI 224
Query: 592 LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSL 640
LCG+ F S + I+ I F + + S S AK + +SL
Sbjct: 225 LCGKPIFPGSSTMNQLERIIGVI---DFPSNEDVESIQSPFAKTMIESL 270
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
++ QL+ + ++HS G++HRD+KP N+LL+
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA 144
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 106/260 (40%), Gaps = 52/260 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 431
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 432 NIVNLHCVFQDEVHT--YXXXXXXXXXXXXDRIRQ--KGRCGFTENEASRIMRQLVAAVH 487
NIV + D +T Y I + K R E R+M QL A+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 488 FMHSRG-----VVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCF--TLQYA 539
H R V+HRDLKP N+ N+K+ DFG A L ++ F T Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYM 183
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFH 599
+PE + ++ Y+E D+WSLG +LY + PF
Sbjct: 184 SPE--------------------------QMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
Query: 600 ARSRDDSALSIMARIKEGQF 619
A S+ + A +I+EG+F
Sbjct: 218 AFSQKELA----GKIREGKF 233
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 914 KGRCGFTENEASRIMRQLVAAVHFMHSRG-----VVHRDLKPENLLLSG 957
K R E R+M QL A+ H R V+HRDLKP N+ L G
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG 151
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 169
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 170 NICR---RCVEKSTGQEYAV 186
NI R R ++++ Y V
Sbjct: 66 NIVRYYDRIIDRTNTTLYIV 85
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV-NHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ A +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDA--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+GVI+ +++
Sbjct: 207 DIWSVGVIMGEMIK 220
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 106/260 (40%), Gaps = 52/260 (20%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 431
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 432 NIVNLHCVFQDEVHT--YXXXXXXXXXXXXDRIRQ--KGRCGFTENEASRIMRQLVAAVH 487
NIV + D +T Y I + K R E R+M QL A+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 488 FMHSRG-----VVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCF--TLQYA 539
H R V+HRDLKP N+ N+K+ DFG A L ++ F T Y
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNHDTSFAKTFVGTPYYM 183
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFH 599
+PE + ++ Y+E D+WSLG +LY + PF
Sbjct: 184 SPE--------------------------QMNRMSYNEKSDIWSLGCLLYELCALMPPFT 217
Query: 600 ARSRDDSALSIMARIKEGQF 619
A S+ + A +I+EG+F
Sbjct: 218 AFSQKELA----GKIREGKF 233
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 914 KGRCGFTENEASRIMRQLVAAVHFMHSRG-----VVHRDLKPENLLLSG 957
K R E R+M QL A+ H R V+HRDLKP N+ L G
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG 151
Score = 33.1 bits (74), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 169
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 170 NICR---RCVEKSTGQEYAV 186
NI R R ++++ Y V
Sbjct: 66 NIVRYYDRIIDRTNTTLYIV 85
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 103/213 (48%), Gaps = 22/213 (10%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI---DC----------SEEI 421
+Y LG G++ V+K +E VK I ++ DC + EI
Sbjct: 21 EYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEI 80
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG-FTENEASRIMR 480
+L + H NI+ + +F+++ + D R E AS I R
Sbjct: 81 AILSRVE-HANIIKVLDIFENQ--GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFR 137
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESL-HTPCFTLQY 538
QLV+AV ++ + ++HRD+K EN++ ++ IK++DFG A L+R L +T C T++Y
Sbjct: 138 QLVSAVGYLRLKDIIHRDIKDENIVIAEDF--TIKLIDFGSAAYLERGKLFYTFCGTIEY 195
Query: 539 AAPEVLRQDKSGYDENCDLWSLGVILVNVLRQD 571
APEVL + E ++WSLGV L ++ ++
Sbjct: 196 CAPEVLMGNPYRGPE-LEMWSLGVTLYTLVFEE 227
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 26/33 (78%)
Query: 924 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
AS I RQLV+AV ++ + ++HRD+K EN++++
Sbjct: 132 ASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA 164
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE--------- 420
+L+F+ K +G+G+Y V + + S G+ A+K I ++D +E
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI--RLDAEDEGIPSTAIRE 69
Query: 421 INLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXD--RIRQKGRCGFTENEASRI 478
I+LL+ HPNIV+L D +H+ D ++ + + G +++
Sbjct: 70 ISLLKELH-HPNIVSL----IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLF-SDPAGDNIKVVDFGFA---CLKRESLHTPCF 534
+ QL+ V H ++HRDLKP+NLL SD A +K+ DFG A + S
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVV 181
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTML 592
TL Y AP+VL K Y + D+WS+G I ++ G ++ L + IL T
Sbjct: 182 TLWYRAPDVLMGSKK-YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT-- 238
Query: 593 CGRVPFHARSRDDSALSIMARIKEGQFN-FDAEAWSTV----SSEAKELTKSLLTVNPAQ 647
R+ + + K+ F F+ + WS++ E +L ++L +P +
Sbjct: 239 -------PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291
Query: 648 RI 649
RI
Sbjct: 292 RI 293
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++ + + G +++ + QL+ V H ++HRDLKP+NLL++
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 92/208 (44%), Gaps = 32/208 (15%)
Query: 386 LGDGSYSVCRRCVE-KSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNIVNLHCV 439
LG+G++ C++ K+ G+ AVKI+ + +D EI +L CV
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIV-KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 440 -----FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
F+ H D I++ G F + ++ Q+ +V+F+HS +
Sbjct: 81 QMLEWFEHHGHI-CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 495 VHRDLKPENLLF--SDPA---------------GDNIKVVDFGFACLKRESLHTPCFTLQ 537
H DLKPEN+LF SD +IKVVDFG A E T T
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVSTRH 199
Query: 538 YAAPEVLRQDKSGYDENCDLWSLGVILV 565
Y APEV+ G+ + CD+WS+G IL+
Sbjct: 200 YRAPEVILA--LGWSQPCDVWSIGCILI 225
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I++ G F + ++ Q+ +V+F+HS + H DLKPEN+L
Sbjct: 105 DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 43/302 (14%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEE--------- 420
+L+F+ K +G+G+Y V + + S G+ A+K I ++D +E
Sbjct: 13 NLYFQGLMEKYQKLEKVGEGTYGVVYKA-KDSQGRIVALKRI--RLDAEDEGIPSTAIRE 69
Query: 421 INLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXD--RIRQKGRCGFTENEASRI 478
I+LL+ HPNIV+L D +H+ D ++ + + G +++
Sbjct: 70 ISLLKELH-HPNIVSL----IDVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIY 124
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLF-SDPAGDNIKVVDFGFA---CLKRESLHTPCF 534
+ QL+ V H ++HRDLKP+NLL SD A +K+ DFG A + S
Sbjct: 125 LYQLLRGVAHCHQHRILHRDLKPQNLLINSDGA---LKLADFGLARAFGIPVRSYTHEVV 181
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTML 592
TL Y AP+VL K Y + D+WS+G I ++ G ++ L + IL T
Sbjct: 182 TLWYRAPDVLMGSKK-YSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGT-- 238
Query: 593 CGRVPFHARSRDDSALSIMARIKEGQFN-FDAEAWSTV----SSEAKELTKSLLTVNPAQ 647
R+ + + K+ F F+ + WS++ E +L ++L +P +
Sbjct: 239 -------PNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNK 291
Query: 648 RI 649
RI
Sbjct: 292 RI 293
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++ + + G +++ + QL+ V H ++HRDLKP+NLL++
Sbjct: 107 KVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN 153
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+ I + EI+LL+ HP
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HP 62
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 63 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 118
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 175
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 176 LGCKY-YSTAVDIWSLGCIFAEMV 198
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 109 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 137
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 87/204 (42%), Gaps = 23/204 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-------EEINLLRACQGHP 431
+ K +G+G+Y V + K TG+ A+ I + EI+LL+ HP
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELN-HP 61
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI---MRQLVAAVHF 488
NIV L D +HT D + T I + QL+ + F
Sbjct: 62 NIVKL----LDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAF 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVL 544
HS V+HRDLKP+NLL + IK+ DFG F R H TL Y APE+L
Sbjct: 118 CHSHRVLHRDLKPQNLLINTEGA--IKLADFGLARAFGVPVRTYTHE-VVTLWYRAPEIL 174
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K Y D+WSLG I ++
Sbjct: 175 LGCKY-YSTAVDIWSLGCIFAEMV 197
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HS V+HRDLKP+NLL++
Sbjct: 108 LFQLLQGLAFCHSHRVLHRDLKPQNLLIN 136
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G+G+Y V + + + G+ +A+K I + + EI++L+ + H NIV L+
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLY- 66
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--GFTENEASRIMRQLVAAVHFMHSRGVVH 496
D +HT D + C G A + QL+ + + H R V+H
Sbjct: 67 ---DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 497 RDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
RDLKP+NLL + +K+ DFG F R+ H TL Y AP+VL K Y
Sbjct: 124 RDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHE-VVTLWYRAPDVLMGSKK-YS 179
Query: 553 ENCDLWSLGVILVNVL 568
D+WS+G I ++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G A + QL+ + + H R V+HRDLKP+NLL++
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS--------RKIDCSEEINLLRACQGHPNIVNLH 437
+G G +S R G A+K + + DC +EI+LL+ HPN++ +
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NHPNVIKYY 98
Query: 438 CVF--QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
F +E++ + +K + E + QL +A+ MHSR V+
Sbjct: 99 ASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVM 158
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFG---FACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
HRD+KP N+ + A +K+ D G F K + H+ T Y +PE R ++GY+
Sbjct: 159 HRDIKPANVFIT--ATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPE--RIHENGYN 214
Query: 553 ENCDLWSLGVILVNVLRQDKSGYDENCDLWSL 584
D+WSLG +L + Y + +L+SL
Sbjct: 215 FKSDIWSLGCLLYEMAALQSPFYGDKMNLYSL 246
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
E + QL +A+ MHSR V+HRD+KP N+ ++
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA 171
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLL 424
G + ++Y++D ++G GS+ + ++ + A+KII K E+ LL
Sbjct: 49 GEKWMDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 425 RACQGHPN-----IVNL--HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
H IV+L H +F++ + D +R G + N +
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHL---CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 161
Query: 478 IMRQLVAAVHFMHS--RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT 535
+Q+ A+ F+ + ++H DLKPEN+L +P IK+VDFG +C + ++ +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
Y +PEVL YD D+WSLG ILV +
Sbjct: 222 RFYRSPEVLL--GMPYDLAIDMWSLGCILVEM 251
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHS--RGVVHRDLKPENLLLSGISGNLIKI 965
D +R G + N + +Q+ A+ F+ + ++H DLKPEN+LL + IKI
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI 202
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G+G+Y V + + + G+ +A+K I + + EI++L+ + H NIV L+
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLY- 66
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--GFTENEASRIMRQLVAAVHFMHSRGVVH 496
D +HT D + C G A + QL+ + + H R V+H
Sbjct: 67 ---DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 497 RDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
RDLKP+NLL + +K+ DFG F R+ H TL Y AP+VL K Y
Sbjct: 124 RDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHE-VVTLWYRAPDVLMGSKK-YS 179
Query: 553 ENCDLWSLGVILVNVL 568
D+WS+G I ++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G A + QL+ + + H R V+HRDLKP+NLL++
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 73.2 bits (178), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLL 424
G + ++Y++D ++G GS+ + ++ + A+KII K E+ LL
Sbjct: 30 GEKWMDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 85
Query: 425 RACQGHPN-----IVNL--HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
H IV+L H +F++ + D +R G + N +
Sbjct: 86 ELMNKHDTEMKYYIVHLKRHFMFRNHL---CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 142
Query: 478 IMRQLVAAVHFMHS--RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT 535
+Q+ A+ F+ + ++H DLKPEN+L +P IK+VDFG +C + ++ +
Sbjct: 143 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQS 202
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
Y +PEVL YD D+WSLG ILV +
Sbjct: 203 RFYRSPEVLL--GMPYDLAIDMWSLGCILVEM 232
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHS--RGVVHRDLKPENLLLSGISGNLIKI 965
D +R G + N + +Q+ A+ F+ + ++H DLKPEN+LL + IKI
Sbjct: 125 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKI 183
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 73.2 bits (178), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK---------IDCSEEINLLRACQGH-PNIV 434
I+G G + C + TG+ YA+K + +K + +E I L G P IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ F + Q G F+E + +++ + MH+R V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
V+RDLKP N+L + ++++ D G AC ++ H T Y APEVL Q YD
Sbjct: 314 VYRDLKPANILLDEHG--HVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDS 370
Query: 554 NCDLWSLGVILVNVLR 569
+ D +SLG +L +LR
Sbjct: 371 SADWFSLGCMLFKLLR 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R L +P+ SP++ + LL +D RRLG A+E+K PFF +DW +
Sbjct: 404 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 324 KRIPAPFVP-----KISNELDVSNFSDEFTKMI 351
++ P P +P ++ D+ +F +E TK I
Sbjct: 464 QKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGI 496
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E + +++ + MH+R VV+RDLKP N+LL
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 91/196 (46%), Gaps = 23/196 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G+G+Y V + + + G+ +A+K I + + EI++L+ + H NIV L+
Sbjct: 10 IGEGTYGVVYKA-QNNYGETFALKKIRLEKEDEGIPSTTIREISILKELK-HSNIVKLY- 66
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--GFTENEASRIMRQLVAAVHFMHSRGVVH 496
D +HT D + C G A + QL+ + + H R V+H
Sbjct: 67 ---DVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLH 123
Query: 497 RDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQDKSGYD 552
RDLKP+NLL + +K+ DFG F R+ H TL Y AP+VL K Y
Sbjct: 124 RDLKPQNLLINREG--ELKIADFGLARAFGIPVRKYTHE-IVTLWYRAPDVLMGSKK-YS 179
Query: 553 ENCDLWSLGVILVNVL 568
D+WS+G I ++
Sbjct: 180 TTIDIWSVGCIFAEMV 195
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
G A + QL+ + + H R V+HRDLKP+NLL++
Sbjct: 96 GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN 134
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK---------IDCSEEINLLRACQGH-PNIV 434
I+G G + C + TG+ YA+K + +K + +E I L G P IV
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ F + Q G F+E + +++ + MH+R V
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFV 312
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
V+RDLKP N+L + ++++ D G AC ++ H T Y APEVL Q YD
Sbjct: 313 VYRDLKPANILLDEHG--HVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDS 369
Query: 554 NCDLWSLGVILVNVLR 569
+ D +SLG +L +LR
Sbjct: 370 SADWFSLGCMLFKLLR 385
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R L +P+ SP++ + LL +D RRLG A+E+K PFF +DW +
Sbjct: 403 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 462
Query: 324 KRIPAPFVP-----KISNELDVSNFSDEFTKMI 351
++ P P +P ++ D+ +F +E TK I
Sbjct: 463 QKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGI 495
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E + +++ + MH+R VV+RDLKP N+LL
Sbjct: 288 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 324
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 107/264 (40%), Gaps = 60/264 (22%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 431
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 432 NIVNLHCVFQDEVHT--YXXXXXXXXXXXXDRIRQ--KGRCGFTENEASRIMRQLVAAVH 487
NIV + D +T Y I + K R E R+M QL A+
Sbjct: 66 NIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALK 125
Query: 488 FMHSRG-----VVHRDLKPENLLFSDPAGDNIKVVDFGFACL-------KRESLHTPCFT 535
H R V+HRDLKP N+ N+K+ DFG A + +E + TP
Sbjct: 126 ECHRRSDGGHTVLHRDLKPANVFLD--GKQNVKLGDFGLARILNHDEDFAKEFVGTP--- 180
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGR 595
Y +PE + ++ Y+E D+WSLG +LY +
Sbjct: 181 -YYMSPE--------------------------QMNRMSYNEKSDIWSLGCLLYELCALM 213
Query: 596 VPFHARSRDDSALSIMARIKEGQF 619
PF A S+ + A +I+EG+F
Sbjct: 214 PPFTAFSQKELA----GKIREGKF 233
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 24/49 (48%), Gaps = 5/49 (10%)
Query: 914 KGRCGFTENEASRIMRQLVAAVHFMHSRG-----VVHRDLKPENLLLSG 957
K R E R+M QL A+ H R V+HRDLKP N+ L G
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDG 151
Score = 33.1 bits (74), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQ-------EYAVKIISRKIDCSEEINLLRACQGHP 169
D + +G GSY C++ KS G+ +Y + K E+NLLR + HP
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELK-HP 65
Query: 170 NICR---RCVEKSTGQEYAV 186
NI R R ++++ Y V
Sbjct: 66 NIVRYYDRIIDRTNTTLYIV 85
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 98/212 (46%), Gaps = 22/212 (10%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLL 424
G + ++Y++D ++G GS+ + ++ + A+KII K E+ LL
Sbjct: 49 GEKWMDRYEID----SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLL 104
Query: 425 RACQGHPN-----IVNL--HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASR 477
H IV+L H +F++ + D +R G + N +
Sbjct: 105 ELMNKHDTEMKYYIVHLKRHFMFRNHL---CLVFEMLSYNLYDLLRNTNFRGVSLNLTRK 161
Query: 478 IMRQLVAAVHFMHS--RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT 535
+Q+ A+ F+ + ++H DLKPEN+L +P IK+VDFG +C + ++ +
Sbjct: 162 FAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQS 221
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
Y +PEVL YD D+WSLG ILV +
Sbjct: 222 RFYRSPEVLL--GMPYDLAIDMWSLGCILVEM 251
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHS--RGVVHRDLKPENLLLSGISGNLIKI 965
D +R G + N + +Q+ A+ F+ + ++H DLKPEN+LL IKI
Sbjct: 144 DLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXAIKI 202
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK---------IDCSEEINLLRACQGH-PNIV 434
I+G G + C + TG+ YA+K + +K + +E I L G P IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ F + Q G F+E + +++ + MH+R V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
V+RDLKP N+L + ++++ D G AC ++ H T Y APEVL Q YD
Sbjct: 314 VYRDLKPANILLDEHG--HVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDS 370
Query: 554 NCDLWSLGVILVNVLR 569
+ D +SLG +L +LR
Sbjct: 371 SADWFSLGCMLFKLLR 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R L +P+ SP++ + LL +D RRLG A+E+K PFF +DW +
Sbjct: 404 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 324 KRIPAPFVP-----KISNELDVSNFSDEFTKMI 351
++ P P +P ++ D+ +F +E TK I
Sbjct: 464 QKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGI 496
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E + +++ + MH+R VV+RDLKP N+LL
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 16/196 (8%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK---------IDCSEEINLLRACQGH-PNIV 434
I+G G + C + TG+ YA+K + +K + +E I L G P IV
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ F + Q G F+E + +++ + MH+R V
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGV--FSEADMRFYAAEIILGLEHMHNRFV 313
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
V+RDLKP N+L + ++++ D G AC ++ H T Y APEVL Q YD
Sbjct: 314 VYRDLKPANILLDEHG--HVRISDLGLACDFSKKKPHASVGTHGYMAPEVL-QKGVAYDS 370
Query: 554 NCDLWSLGVILVNVLR 569
+ D +SLG +L +LR
Sbjct: 371 SADWFSLGCMLFKLLR 386
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R L +P+ SP++ + LL +D RRLG A+E+K PFF +DW +
Sbjct: 404 RMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFL 463
Query: 324 KRIPAPFVP-----KISNELDVSNFSDEFTKMI 351
++ P P +P ++ D+ +F +E TK I
Sbjct: 464 QKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGI 496
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
F+E + +++ + MH+R VV+RDLKP N+LL
Sbjct: 289 FSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL 325
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ A +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDA--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 207 DIWSVGCIMGEMIK 220
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 124/285 (43%), Gaps = 27/285 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI++L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXV-NHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ + +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVK--SDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWS-----LGVI---LYTMLCGRVPFHARSRDD 605
D+WS+G I+ ++R G D D W+ LG L V + +R
Sbjct: 207 DIWSVGCIMGEMVRHKILFPGRD-YIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPK 265
Query: 606 SA-LSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
A L+ + F D+E +S+A++L +L ++PA+RI
Sbjct: 266 YAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 310
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 25/226 (11%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNI 433
EQ ++ ++G+GS+ V + + + K++ K + E+ ++R + HPN+
Sbjct: 36 EQREIAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVK-HPNV 94
Query: 434 VNLHCVF------QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
V+L F +DEV Y +++Q + M QL
Sbjct: 95 VDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIK----LYMYQL 150
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAA 540
+ ++ ++HS G+ HRD+KP+NLL P+G +K++DFG A + E + + Y A
Sbjct: 151 LRSLAYIHSIGICHRDIKPQNLLLDPPSG-VLKLIDFGSAKILIAGEPNVSXICSRYYRA 209
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQD-----KSGYDENCDL 581
PE++ + Y N D+WS G ++ +++ +SG D+ ++
Sbjct: 210 PELIF-GATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEI 254
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
M QL+ ++ ++HS G+ HRD+KP+NLLL SG L
Sbjct: 147 MYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVL 181
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 32/208 (15%)
Query: 386 LGDGSYSVCRRCVE-KSTGQEYAVKIISRKID-----CSEEINLLRACQGHPNIVNLHCV 439
LG+G++ C++ K+ G+ AVKI+ + +D EI +L CV
Sbjct: 22 LGEGAFGKVVECIDHKAGGRHVAVKIV-KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCV 80
Query: 440 -----FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
F+ H D I++ G F + ++ Q+ +V+F+HS +
Sbjct: 81 QMLEWFEHHGHI-CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKL 139
Query: 495 VHRDLKPENLLF--SDPA---------------GDNIKVVDFGFACLKRESLHTPCFTLQ 537
H DLKPEN+LF SD +IKVVDFG A E T
Sbjct: 140 THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDEHHSTLVXXRH 199
Query: 538 YAAPEVLRQDKSGYDENCDLWSLGVILV 565
Y APEV+ G+ + CD+WS+G IL+
Sbjct: 200 YRAPEVILA--LGWSQPCDVWSIGCILI 225
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
D I++ G F + ++ Q+ +V+F+HS + H DLKPEN+L
Sbjct: 105 DFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILF 151
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 97/216 (44%), Gaps = 25/216 (11%)
Query: 370 SLFFEQYDMD--LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEI 421
+L+F+ D + K +G GS+ + ++ T + A+KII D +EI
Sbjct: 17 NLYFQSMDPEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEI 76
Query: 422 NLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQ 481
+L C P + + + + + D + E + + I+R+
Sbjct: 77 TVLSQCDS-PYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILRE 132
Query: 482 LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFT 535
++ + ++HS +HRD+K N+L S+ +K+ DFG A +KR + F
Sbjct: 133 ILKGLDYLHSEKKIHRDIKAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPF- 189
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQD 571
+ APEV++Q S YD D+WSLG+ + + R +
Sbjct: 190 --WMAPEVIKQ--SAYDSKADIWSLGITAIELARGE 221
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
E + + I+R+++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 174
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 381 DKAGI------LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEI----NLLRACQGH 430
D AGI +G+G+Y + TGQ A+K++ D EEI N+L+ H
Sbjct: 21 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHH 80
Query: 431 PNIVNLHCVF--------QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
NI + F D++ + D I+ E + I R++
Sbjct: 81 RNIATYYGAFIKKNPPGMDDQL--WLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYA 539
+ + +H V+HRD+K +N+L ++ A +K+VDFG A L R F T +
Sbjct: 139 LRGLSHLHQHKVIHRDIKGQNVLLTENA--EVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 540 APEVLRQDK---SGYDENCDLWSLGVILVNV 567
APEV+ D+ + YD DLWSLG+ + +
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEM 227
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
D I+ E + I R+++ + +H V+HRD+K +N+LL+
Sbjct: 116 DLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT 163
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 86/194 (44%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + G AVK +SR E+ LL+ C H NI++L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-CVNHKNIISLLN 88
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q S ++ Q++ + +HS G++HR
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 148
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A + TP T Y APEV+ GY EN
Sbjct: 149 DLKPSNIVVKSDC--TLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL--GMGYKENV 204
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 205 DIWSVGCIMGELVK 218
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 157
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV-NHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ A +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDA--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 207 DIWSVGCIMGEMIK 220
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 462 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
I G+ GF E A ++ + +H +V+RDLKPEN+L D +I++ D G
Sbjct: 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGL 332
Query: 522 ACL--KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENC 579
A + +++ T+ Y APEV++ ++ Y +
Sbjct: 333 AVHVPEGQTIKGRVGTVGYMAPEVVKNER--------------------------YTFSP 366
Query: 580 DLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKS 639
D W+LG +LY M+ G+ PF R + + +KE E S +A+ L
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VPEEYSERFSPQARSLCSQ 422
Query: 640 LLTVNPAQRI 649
LL +PA+R+
Sbjct: 423 LLCKDPAERL 432
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 265 RILKTEPP-IPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R++K P E SP S+LL KDP RLG A E+K HP F +++ L
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458
Query: 324 KRIPAPFVPK-----ISNELDVSNFS 344
+ PF P + LD+ FS
Sbjct: 459 GMLEPPFKPDPQAIYCKDVLDIEQFS 484
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I G+ GF E A ++ + +H +V+RDLKPEN+LL
Sbjct: 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 70.9 bits (172), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 37 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 95
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 96 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 155
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+
Sbjct: 156 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI----------- 202
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
LG+ GY EN DLWS+G I+ M+C ++ F R D
Sbjct: 203 ----LGM-----------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID 237
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 134 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 164
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 462 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
I G+ GF E A ++ + +H +V+RDLKPEN+L D +I++ D G
Sbjct: 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHG--HIRISDLGL 332
Query: 522 ACL--KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENC 579
A + +++ T+ Y APEV++ ++ Y +
Sbjct: 333 AVHVPEGQTIKGRVGTVGYMAPEVVKNER--------------------------YTFSP 366
Query: 580 DLWSLGVILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKS 639
D W+LG +LY M+ G+ PF R + + +KE E S +A+ L
Sbjct: 367 DWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKE----VPEEYSERFSPQARSLCSQ 422
Query: 640 LLTVNPAQRI 649
LL +PA+R+
Sbjct: 423 LLCKDPAERL 432
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 6/86 (6%)
Query: 265 RILKTEPP-IPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
R++K P E SP S+LL KDP RLG A E+K HP F +++ L
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGA 458
Query: 324 KRIPAPFVPK-----ISNELDVSNFS 344
+ PF P + LD+ FS
Sbjct: 459 GMLEPPFKPDPQAIYCKDVLDIEQFS 484
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I G+ GF E A ++ + +H +V+RDLKPEN+LL
Sbjct: 275 IYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 123/287 (42%), Gaps = 31/287 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS+G I+ +++ G D + D W+ + C F + + + R
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPE--FMKKLQPTVRTYVENR 263
Query: 614 IKEGQFNF-----------DAEAWSTVSSEAKELTKSLLTVNPAQRI 649
K ++F D+E + +S+A++L +L ++ ++RI
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVIDASKRI 310
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 95/230 (41%), Gaps = 39/230 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 26 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 84
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 85 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 144
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+
Sbjct: 145 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVI----------- 191
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
LG+ GY EN DLWS+G I+ M+C ++ F R D
Sbjct: 192 ----LGM-----------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID 226
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 153
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 89/198 (44%), Gaps = 23/198 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G GS+ + ++ T + A+KII D +EI +L C P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGS 73
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ + + D + E + + I+R+++ + ++HS +HRD+
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 500 KPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
K N+L S+ +K+ DFG A +KR + F + APEV++Q S YD
Sbjct: 131 KAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNTFVGTPF---WMAPEVIKQ--SAYDS 183
Query: 554 NCDLWSLGVILVNVLRQD 571
D+WSLG+ + + R +
Sbjct: 184 KADIWSLGITAIELARGE 201
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
E + + I+R+++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 207 DIWSVGCIMGEMIK 220
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 70.5 bits (171), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVV-NHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ A +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDA--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 207 DIWSVGCIMGEMIK 220
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 23/196 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G GS+ + ++ T + A+KII D +EI +L C P + +
Sbjct: 30 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGS 88
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ + + D + E + + I+R+++ + ++HS +HRD+
Sbjct: 89 YLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDI 145
Query: 500 KPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
K N+L S+ +K+ DFG A +KR F + APEV++Q S YD
Sbjct: 146 KAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNXFVGTPF---WMAPEVIKQ--SAYDS 198
Query: 554 NCDLWSLGVILVNVLR 569
D+WSLG+ + + R
Sbjct: 199 KADIWSLGITAIELAR 214
Score = 36.6 bits (83), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
E + + I+R+++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 169
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 31/287 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 34 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 92
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 93 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 152
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--TLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S F T Y APEV+ GY EN
Sbjct: 153 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL--GMGYKENV 208
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS+G I+ +++ G D + D W+ + C F + + + R
Sbjct: 209 DIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPE--FMKKLQPTVRTYVENR 265
Query: 614 IKEGQFNF-----------DAEAWSTVSSEAKELTKSLLTVNPAQRI 649
K ++F D+E +S+A++L +L ++ ++RI
Sbjct: 266 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 312
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 161
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 23/198 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G GS+ + ++ T + A+KII D +EI +L C P + +
Sbjct: 15 IGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYVTKYYGS 73
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ + + D + E + + I+R+++ + ++HS +HRD+
Sbjct: 74 YLKDTKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDI 130
Query: 500 KPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
K N+L S+ +K+ DFG A +KR F + APEV++Q S YD
Sbjct: 131 KAANVLLSEHG--EVKLADFGVAGQLTDTQIKRNXFVGTPF---WMAPEVIKQ--SAYDS 183
Query: 554 NCDLWSLGVILVNVLRQD 571
D+WSLG+ + + R +
Sbjct: 184 KADIWSLGITAIELARGE 201
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 10/52 (19%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
E + + I+R+++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL 154
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 93/230 (40%), Gaps = 39/230 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + T Y APEV+
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI----------- 197
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
LG+ GY EN DLWS+G I+ M+C ++ F R D
Sbjct: 198 ----LGM-----------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID 232
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 25/200 (12%)
Query: 385 ILGD-GSYSVCRRCVEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNLHC 438
I+G+ G + + K T A K+I K D EI++L +C HPNIV L
Sbjct: 16 IIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-HPNIVKLLD 74
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F E + + D + + TE++ + +Q + A++++H ++HRD
Sbjct: 75 AFYYENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRD 133
Query: 499 LKPENLLFSDPAGDNIKVVDFGFAC-------LKRES-LHTPCFTLQYAAPEVLRQDKSG 550
LK N+LF+ +IK+ DFG + +R+S + TP + APEV+ + S
Sbjct: 134 LKAGNILFT--LDGDIKLADFGVSAKNTRTXIQRRDSFIGTP----YWMAPEVVMCETSK 187
Query: 551 ---YDENCDLWSLGVILVNV 567
YD D+WSLG+ L+ +
Sbjct: 188 DRPYDYKADVWSLGITLIEM 207
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 25/38 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE++ + +Q + A++++H ++HRDLK N+L +
Sbjct: 105 LTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT 142
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 11/188 (5%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEINLLRACQGHPNIVNLHCVFQDE 443
LG G YS + + ++ VKI+ +K EI +L +G PNI+ L + +D
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRGGPNIITLADIVKDP 104
Query: 444 V-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPE 502
V T ++ Q T+ + M +++ A+ + HS G++HRD+KP
Sbjct: 105 VSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPH 160
Query: 503 NLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSL 560
N++ D ++++D+G A + + + + PE+L D YD + D+WSL
Sbjct: 161 NVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELL-VDYQMYDYSLDMWSL 218
Query: 561 GVILVNVL 568
G +L +++
Sbjct: 219 GCMLASMI 226
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 469 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRE 527
GF E A Q+V+ + +H R +++RDLKPEN+L D N+++ D G A LK
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAG 342
Query: 528 SLHTPCF--TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
T + T + APE+L ++ YD + D ++LG
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEE--------------------------YDFSVDYFALG 376
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY M+ R PF AR + R+ E + S +K+ ++LL +P
Sbjct: 377 VTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDP 432
Query: 646 AQRI 649
+R+
Sbjct: 433 EKRL 436
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
+R+L+ P+ SP DF LL KDP +RLG + + L+ HP F I W L
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 324 KRIPAPFVPK-----ISNELDVSNFS 344
+ PFVP N DV FS
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFS 488
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
GF E A Q+V+ + +H R +++RDLKPEN+LL
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 33 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 91
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 92 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 151
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 152 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 207
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS+G I+ +++ G D + D W+ + C F + + + R
Sbjct: 208 DIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPE--FMKKLQPTVRTYVENR 264
Query: 614 IKEGQFNF-----------DAEAWSTVSSEAKELTKSLLTVNPAQRI 649
K ++F D+E +S+A++L +L ++ ++RI
Sbjct: 265 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 469 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRE 527
GF E A Q+V+ + +H R +++RDLKPEN+L D N+++ D G A LK
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAG 342
Query: 528 SLHTPCF--TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
T + T + APE+L ++ YD + D ++LG
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEE--------------------------YDFSVDYFALG 376
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY M+ R PF AR + R+ E + S +K+ ++LL +P
Sbjct: 377 VTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDP 432
Query: 646 AQRI 649
+R+
Sbjct: 433 EKRL 436
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
+R+L+ P+ SP DF LL KDP +RLG + + L+ HP F I W L
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 324 KRIPAPFVPK-----ISNELDVSNFS 344
+ PFVP N DV FS
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFS 488
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
GF E A Q+V+ + +H R +++RDLKPEN+LL
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 469 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRE 527
GF E A Q+V+ + +H R +++RDLKPEN+L D N+++ D G A LK
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAG 342
Query: 528 SLHTPCF--TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
T + T + APE+L ++ YD + D ++LG
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEE--------------------------YDFSVDYFALG 376
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY M+ R PF AR + R+ E + S +K+ ++LL +P
Sbjct: 377 VTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDP 432
Query: 646 AQRI 649
+R+
Sbjct: 433 EKRL 436
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 40/86 (46%), Gaps = 5/86 (5%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
+R+L+ P+ SP DF LL KDP +RLG + + L+ HP F I W L
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 324 KRIPAPFVPK-----ISNELDVSNFS 344
+ PFVP N DV FS
Sbjct: 463 GMLTPPFVPDSRTVYAKNIQDVGAFS 488
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
GF E A Q+V+ + +H R +++RDLKPEN+LL
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 31/287 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLRQDK--SGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMAR 613
D+WS+G I+ +++ G D + D W+ + C F + + + R
Sbjct: 207 DIWSVGCIMGEMIKGGVLFPGTD-HIDQWNKVIEQLGTPCPE--FMKKLQPTVRTYVENR 263
Query: 614 IKEGQFNF-----------DAEAWSTVSSEAKELTKSLLTVNPAQRI 649
K ++F D+E +S+A++L +L ++ ++RI
Sbjct: 264 PKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 88/193 (45%), Gaps = 13/193 (6%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + Q+ AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIGLLD 94
Query: 439 VF--QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D ++ ++ QL+ + ++HS G++H
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGIIH 154
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP N+ ++ + ++++DFG A E + T Y APE++ + Y++ D
Sbjct: 155 RDLKPSNVAVNEDS--ELRILDFGLARQADEEMTGYVATRWYRAPEIML-NWMHYNQTVD 211
Query: 557 LWSLGVILVNVLR 569
+WS+G I+ +L+
Sbjct: 212 IWSVGCIMAELLQ 224
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
++ ++ QL+ + ++HS G++HRDLKP N+
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 162
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 104/248 (41%), Gaps = 47/248 (18%)
Query: 378 MDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKID----CS--EEINLLRACQGHP 431
+ LDK LG+G+Y+ + K T A+K I + + C+ E++LL+ + H
Sbjct: 5 IKLDK---LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLK-HA 60
Query: 432 NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTEN--EASRIMRQLVAAVHFM 489
NIV LH D +HT D + CG N + QL+ + +
Sbjct: 61 NIVTLH----DIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYC 116
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRESLHTPCFTLQYAAPEVLRQ 546
H + V+HRDLKP+NLL ++ +K+ DFG A + ++ TL Y P++L
Sbjct: 117 HRQKVLHRDLKPQNLLINERG--ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDIL-- 172
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDS 606
LG + Y D+W +G I Y M GR P S +
Sbjct: 173 -------------LG----------STDYSTQIDMWGVGCIFYEMATGR-PLFPGSTVEE 208
Query: 607 ALSIMARI 614
L + RI
Sbjct: 209 QLHFIFRI 216
Score = 33.5 bits (75), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + + H + V+HRDLKP+NLL++
Sbjct: 105 FLFQLLRGLAYCHRQKVLHRDLKPQNLLIN 134
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 35/184 (19%)
Query: 469 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRE 527
GF E A Q+V+ + +H R +++RDLKPEN+L D N+++ D G A LK
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDG--NVRISDLGLAVELKAG 342
Query: 528 SLHTPCF--TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
T + T + APE+L ++ YD + D ++LG
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEE--------------------------YDFSVDYFALG 376
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
V LY M+ R PF AR + R+ E + S +K+ ++LL +P
Sbjct: 377 VTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP----DKFSPASKDFCEALLQKDP 432
Query: 646 AQRI 649
+R+
Sbjct: 433 EKRL 436
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 264 RRILKTEPPIPEDLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLAT 323
+R+L+ P+ SP DF LL KDP +RLG + + L+ HP F I W L
Sbjct: 403 QRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDISWRQLEA 462
Query: 324 KRIPAPFVP 332
+ PFVP
Sbjct: 463 GMLTPPFVP 471
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
GF E A Q+V+ + +H R +++RDLKPEN+LL
Sbjct: 285 GFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES-LHTP-CFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + TP T Y APEV+ GY EN
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL--GMGYKENV 206
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +++
Sbjct: 207 DIWSVGCIMGEMIK 220
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 91/194 (46%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + Q+ AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIGLLD 94
Query: 439 VF--QDEVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C ++ ++ QL+ + ++HS G++
Sbjct: 95 VFTPATSIEDFSEVYLVTTLMGAD-LNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP N+ ++ + ++++DFG A E + T Y APE++ + Y++
Sbjct: 154 HRDLKPSNVAVNEDS--ELRILDFGLARQADEEMTGYVATRWYRAPEIML-NWMHYNQTV 210
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +L+
Sbjct: 211 DIWSVGCIMAELLQ 224
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
++ ++ QL+ + ++HS G++HRDLKP N+
Sbjct: 127 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 162
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 93/230 (40%), Gaps = 39/230 (16%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + + A+K +SR E+ L++ C H NI+ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMK-CVNHKNIIGLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q + S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRES--LHTPCFTLQYAAPEVLRQDKSGYDENC 555
DLKP N++ +K++DFG A S + T Y APEV+
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVI----------- 197
Query: 556 DLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
LG+ GY EN D+WS+G I+ M+C ++ F R D
Sbjct: 198 ----LGM-----------GYKENVDIWSVGCIMGEMVCHKILFPGRDYID 232
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 84
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRCG-FTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 144 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 200
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 201 DIWSVGCIMAELL 213
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/39 (33%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 916 RCG-FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
+C T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G GS+ + ++ T + A+KII D +EI +L C P I
Sbjct: 27 IGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDS-PYITRYFGS 85
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ + D ++ E + I+R+++ + ++HS +HRD+
Sbjct: 86 YLKSTKLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDI 142
Query: 500 KPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
K N+L S+ GD +K+ DFG A +KR F + APEV++Q S YD
Sbjct: 143 KAANVLLSE-QGD-VKLADFGVAGQLTDTQIKRNXFVGTPF---WMAPEVIKQ--SAYDF 195
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
D+WSLG+ + + + G N DL + V+
Sbjct: 196 KADIWSLGITAIELAK----GEPPNSDLHPMRVLF 226
Score = 35.0 bits (79), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 10/52 (19%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
E + I+R+++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 115 ETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL 166
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 108
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 168 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMXGXVATRWYRAPEIML-NWMHYNQTV 224
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 225 DIWSVGCIMAELL 237
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLLRACQGHPNIVNLHCVF 440
++G GS+ + + Q A+K++ + +EEI +L + ++ +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 441 QDEVHTYX----XXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
E T+ + I++ GF+ + ++ + +H ++H
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
DLKPEN+L IKV+DFG +C + + ++T + Y APEV+ + Y D
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGAR--YGMPID 281
Query: 557 LWSLGVILVNVL 568
+WSLG IL +L
Sbjct: 282 MWSLGCILAELL 293
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 96/215 (44%), Gaps = 27/215 (12%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G GS+ + ++ T Q A+KII D +EI +L C + +
Sbjct: 31 IGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSS-YVTKYYGS 89
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
+ + D +R F E + + ++++++ + ++HS +HRD+
Sbjct: 90 YLKGSKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDI 146
Query: 500 KPENLLFSDPAGDNIKVVDFGFAC------LKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
K N+L S+ ++K+ DFG A +KR + F + APEV++Q S YD
Sbjct: 147 KAANVLLSEQG--DVKLADFGVAGQLTDTQIKRNTFVGTPF---WMAPEVIQQ--SAYDS 199
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
D+WSLG+ + + + G N D+ + V+
Sbjct: 200 KADIWSLGITAIELAK----GEPPNSDMHPMRVLF 230
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 11/58 (18%)
Query: 916 RCG-FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS----------GISGNL 962
R G F E + + ++++++ + ++HS +HRD+K N+LLS G++G L
Sbjct: 113 RAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 170
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 90
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ + +K++DFG A + + T Y APE++ + Y++
Sbjct: 150 HRDLKPSNLAVNEDS--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 206
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 207 DIWSVGCIMAELL 219
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS-RKIDCS-----EEINLLRACQGHPN 432
D + ++G G+ +V + ++ A+K I+ K S +EI + C HPN
Sbjct: 16 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH-HPN 74
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQ---KG--RCG-FTENEASRIMRQLVAAV 486
IV+ + F + + D I+ KG + G E+ + I+R+++ +
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC------------LKRESLHTPCF 534
++H G +HRD+K N+L + ++++ DFG + +++ + TPC
Sbjct: 135 EYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC- 191
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+ APEV+ Q + GYD D+WS G+ + +
Sbjct: 192 ---WMAPEVMEQVR-GYDFKADIWSFGITAIEL 220
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E+ + I+R+++ + ++H G +HRD+K N+LL
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG 155
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 94
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ + +K++DFG A + + T Y APE++ + Y++
Sbjct: 154 HRDLKPSNLAVNEDS--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 210
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 211 DIWSVGCIMAELL 223
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D T++ ++ Q++ + ++HS ++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ +K++DFG A + + T Y APE++ + Y++ D
Sbjct: 149 RDLKPSNLAVNEDX--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVD 205
Query: 557 LWSLGVILVNVL 568
+WS+G I+ +L
Sbjct: 206 IWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 90/194 (46%), Gaps = 15/194 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + Q+ AVK +SR E+ LL+ + H N++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLK-HENVIGLLD 86
Query: 439 VFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C ++ ++ QL+ + ++HS G++
Sbjct: 87 VFTPATSIEDFSEVYLVTTLMGAD-LNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGII 145
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP N+ ++ ++++DFG A E + T Y APE++ + Y++
Sbjct: 146 HRDLKPSNVAVNEDC--ELRILDFGLARQADEEMTGYVATRWYRAPEIML-NWMHYNQTV 202
Query: 556 DLWSLGVILVNVLR 569
D+WS+G I+ +L+
Sbjct: 203 DIWSVGCIMAELLQ 216
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 23/36 (63%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
++ ++ QL+ + ++HS G++HRDLKP N+
Sbjct: 119 ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV 154
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 85/192 (44%), Gaps = 10/192 (5%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLLRACQGHPNIVNLHCVF 440
++G GS+ + + Q A+K++ + +EEI +L + ++ +
Sbjct: 104 VIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 441 QDEVHTYX----XXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
E T+ + I++ GF+ + ++ + +H ++H
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
DLKPEN+L IKV+DFG +C + + ++T + Y APEV+ + Y D
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGAR--YGMPID 281
Query: 557 LWSLGVILVNVL 568
+WSLG IL +L
Sbjct: 282 MWSLGCILAELL 293
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 108
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 168 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 224
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 225 DIWSVGCIMAELL 237
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 126/294 (42%), Gaps = 50/294 (17%)
Query: 385 ILGDGSY----------SVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQGHPNIV 434
+LG+GSY ++CRR V+ ++ +I + + + +EI LLR + H N++
Sbjct: 12 LLGEGSYGKVKEVLDSETLCRRAVKILK-KKKLRRIPNGEANVKKEIQLLRRLR-HKNVI 69
Query: 435 NLHCVFQDE----VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
L V +E ++ D + +K F +A QL+ + ++H
Sbjct: 70 QLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKR---FPVCQAHGYFCQLIDGLEYLH 126
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSG 550
S+G+VH+D+KP NLL + G +K+ G A E+LH +AA + R +
Sbjct: 127 SQGIVHKDIKPGNLLLT--TGGTLKISALGVA----EALHP------FAADDTCRTSQGS 174
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSI 610
+ G+ SG+ D+WS GV LY + G PF D+ +
Sbjct: 175 PAFQPPEIANGL-------DTFSGF--KVDIWSAGVTLYNITTGLYPFEG----DNIYKL 221
Query: 611 MARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR--IRMMRVKLTFHAFH 662
I +G + + +S +L K +L PA+R IR +R F H
Sbjct: 222 FENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWFRKKH 271
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
F +A QL+ + ++HS+G+VH+D+KP NLLL+ +G +KI
Sbjct: 106 FPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT--TGGTLKI 150
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 107
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 167 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 223
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 224 DIWSVGCIMAELL 236
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 98
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 99 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 158 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 214
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 215 DIWSVGCIMAELL 227
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 132 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 166
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 84
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 144 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 200
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 201 DIWSVGCIMAELL 213
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 93
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 153 HRDLKPSNLAVNEDX--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 209
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 210 DIWSVGCIMAELL 222
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 99/213 (46%), Gaps = 32/213 (15%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIIS-RKIDCS-----EEINLLRACQGHPN 432
D + ++G G+ +V + ++ A+K I+ K S +EI + C HPN
Sbjct: 11 DYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCH-HPN 69
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQ---KG--RCG-FTENEASRIMRQLVAAV 486
IV+ + F + + D I+ KG + G E+ + I+R+++ +
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 487 HFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC------------LKRESLHTPCF 534
++H G +HRD+K N+L + ++++ DFG + +++ + TPC
Sbjct: 130 EYLHKNGQIHRDVKAGNILLGEDG--SVQIADFGVSAFLATGGDITRNKVRKTFVGTPC- 186
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+ APEV+ Q + GYD D+WS G+ + +
Sbjct: 187 ---WMAPEVMEQVR-GYDFKADIWSFGITAIEL 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 24/36 (66%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E+ + I+R+++ + ++H G +HRD+K N+LL
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG 150
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 22/122 (18%)
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CL 524
+E R+ RQ++ A+ ++HS+G++HRDLKP N+ + N+K+ DFG A L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDIL 173
Query: 525 KRESLHTP---------CFTLQYAAPEVLRQDKSG-YDENCDLWSLGVILVNVLRQDKSG 574
K +S + P T Y A EVL D +G Y+E D++SLG+I ++ +G
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVL--DGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
Query: 575 YD 576
+
Sbjct: 232 ME 233
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E R+ RQ++ A+ ++HS+G++HRDLKP N+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 66/122 (54%), Gaps = 22/122 (18%)
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CL 524
+E R+ RQ++ A+ ++HS+G++HRDLKP N+ + N+K+ DFG A L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESR--NVKIGDFGLAKNVHRSLDIL 173
Query: 525 KRESLHTP---------CFTLQYAAPEVLRQDKSG-YDENCDLWSLGVILVNVLRQDKSG 574
K +S + P T Y A EVL D +G Y+E D++SLG+I ++ +G
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAMYVATEVL--DGTGHYNEKIDMYSLGIIFFEMIYPFSTG 231
Query: 575 YD 576
+
Sbjct: 232 ME 233
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E R+ RQ++ A+ ++HS+G++HRDLKP N+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 149
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D T++ ++ Q++ + ++HS ++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ +K++DFG A + + T Y APE++ + Y++ D
Sbjct: 149 RDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVD 205
Query: 557 LWSLGVILVNVL 568
+WS+G I+ +L
Sbjct: 206 IWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 99
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 159 HRDLKPSNLAVNEDX--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 215
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 216 DIWSVGCIMAELL 228
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 84
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 144 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMAGFVATRWYRAPEIML-NWMHYNQTV 200
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 201 DIWSVGCIMAELL 213
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 19/196 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+ + + G AVK +SR E+ LL+ C H NI++L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLK-CVNHKNIISLLN 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXD-RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
VF + D + Q S ++ Q++ + +HS G++HR
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMDANLCQVIHMELDHERMSYLLYQMLCGIKHLHSAGIIHR 150
Query: 498 DLKPENLLFSDPAGDNIKVVDFGF---ACLKRESLHTP-CFTLQYAAPEVLRQDKSGYDE 553
DLKP N++ +K++DFG AC + TP T Y APEV+ GY
Sbjct: 151 DLKPSNIVVKSDC--TLKILDFGLARTAC--TNFMMTPYVVTRYYRAPEVIL--GMGYAA 204
Query: 554 NCDLWSLGVILVNVLR 569
N D+WS+G I+ +++
Sbjct: 205 NVDIWSVGCIMGELVK 220
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 12/31 (38%), Positives = 23/31 (74%)
Query: 925 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
S ++ Q++ + +HS G++HRDLKP N+++
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 94
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 154 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 210
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 211 DIWSVGCIMAELL 223
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 96/213 (45%), Gaps = 11/213 (5%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQ 428
GSL Y +++ ++G G++ V C K ++ A+K I + + I LR
Sbjct: 1 GSLHMIDYK-EIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVELRQLS 57
Query: 429 --GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMR--QLVA 484
HPNIV L+ + V + + S ++ Q VA
Sbjct: 58 RVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVA 117
Query: 485 AVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVL 544
+H M + ++HRDLKP NLL G +K+ DFG AC + + + + APEV
Sbjct: 118 YLHSMQPKALIHRDLKPPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 176
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+ S Y E CD++S G+IL V+ + K +DE
Sbjct: 177 --EGSNYSEKCDVFSWGIILWEVITRRKP-FDE 206
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q VA +H M + ++HRDLKP NLLL G ++KI
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKI 148
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NAMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 93
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 153 HRDLKPSNLAVNEDX--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 209
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 210 DIWSVGCIMAELL 222
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 67.4 bits (163), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 95/223 (42%), Gaps = 34/223 (15%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVE-KSTGQEYAVKIISRKIDCSE----EINL 423
G E+Y++ LG+G++ +CV+ + G A+KII E EIN+
Sbjct: 28 GDWLQERYEI----VSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINV 83
Query: 424 L-RACQGHPNIVNLHCVFQDEVHTYXXXX----XXXXXXXXDRIRQKGRCGFTENEASRI 478
L + + P+ NL CV + Y D ++ + ++ +
Sbjct: 84 LEKINEKDPDNKNL-CVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNYLPYPIHQVRHM 142
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDP-----------------AGDNIKVVDFGF 521
QL AV F+H + H DLKPEN+LF + ++VVDFG
Sbjct: 143 AFQLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGS 202
Query: 522 ACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVIL 564
A E T T Y APEV+ + G+ + CD+WS+G I+
Sbjct: 203 ATFDHEHHSTIVSTRHYRAPEVILE--LGWSQPCDVWSIGCII 243
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/26 (53%), Positives = 17/26 (65%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLL 955
QL AV F+H + H DLKPEN+L
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILF 170
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGXVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 111
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 171 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMXGYVATRWYRAPEIML-NWMHYNQTV 227
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 228 DIWSVGCIMAELL 240
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G G+ ++ +TGQE A++ ++ +K EI ++R + +PNIVN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSY 86
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + + C E + + + R+ + A+ F+HS V+HRD+K
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 501 PENLLFSDPAGDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
+N+L ++K+ DFGF ++ T T + APEV+ + Y D+
Sbjct: 144 SDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVT--RKAYGPKVDI 199
Query: 558 WSLGVILVNVLRQDKSGYDEN 578
WSLG++ + ++ + +EN
Sbjct: 200 WSLGIMAIEMIEGEPPYLNEN 220
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E + + + R+ + A+ F+HS V+HRD+K +N+LL G+ G++
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-GMDGSV 155
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 95
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 155 HRDLKPSNLAVNEDC--ELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYNQTV 211
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 212 DIWSVGCIMAELL 224
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 93
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 153 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 209
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 210 DIWSVGCIMAELL 222
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 87
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 88 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 146
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 147 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 203
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 204 DIWSVGCIMAELL 216
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 121 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 155
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 99
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 100 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 159 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 215
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 216 DIWSVGCIMAELL 228
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 133 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 167
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 95
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 155 HRDLKPSNLAVNEDC--ELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYNQTV 211
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 212 DIWSVGCIMAELL 224
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 95
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 155 HRDLKPSNLAVNEDC--ELKILDFGLARHTADEMTGYVATRWYRAPEIML-NWMHYNQTV 211
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 212 DIWSVGCIMAELL 224
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 90
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 150 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 206
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 207 DIWSVGCIMAELL 219
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 107
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 108 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 167 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 223
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 224 DIWSVGCIMAELL 236
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 141 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 175
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 100
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 160 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 216
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 217 DIWSVGCIMAELL 229
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 100
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 160 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 216
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 217 DIWSVGCIMAELL 229
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 96/205 (46%), Gaps = 24/205 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G G+ ++ +TGQE A++ ++ +K EI ++R + +PNIVN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSY 86
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + + C E + + + R+ + A+ F+HS V+HRD+K
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 501 PENLLFSDPAGDNIKVVDFGFACL-------KRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
+N+L ++K+ DFGF + E + TP + APEV+ + Y
Sbjct: 144 SDNILLG--MDGSVKLTDFGFCAQITPEQSKRSEMVGTP----YWMAPEVVT--RKAYGP 195
Query: 554 NCDLWSLGVILVNVLRQDKSGYDEN 578
D+WSLG++ + ++ + +EN
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E + + + R+ + A+ F+HS V+HRD+K +N+LL G+ G++
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-GMDGSV 155
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 90
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 150 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 206
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 207 DIWSVGCIMAELL 219
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 95
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 96 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 155 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 211
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 212 DIWSVGCIMAELL 224
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 129 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 163
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 111
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 112 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 171 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 227
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 228 DIWSVGCIMAELL 240
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 145 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 179
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 85
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 145 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 201
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 202 DIWSVGCIMAELL 214
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 94
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 154 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 210
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 211 DIWSVGCIMAELL 223
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 85
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 86 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 145 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 201
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 202 DIWSVGCIMAELL 214
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 119 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 153
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 108
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 109 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 168 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 224
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 225 DIWSVGCIMAELL 237
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 142 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 176
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 93
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 94 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 153 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 209
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 210 DIWSVGCIMAELL 222
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 127 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 161
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 90
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 91 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 150 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 206
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 207 DIWSVGCIMAELL 219
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 124 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 158
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 86
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 87 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 146 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 202
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 203 DIWSVGCIMAELL 215
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 154
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 84
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 85 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 144 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 200
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 201 DIWSVGCIMAELL 213
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 118 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 152
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 166
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 201
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 202 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 247
Query: 646 AQR 648
+ R
Sbjct: 248 SDR 250
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 154
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 167
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 202
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 203 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 248
Query: 646 AQR 648
+ R
Sbjct: 249 SDR 251
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 194
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 229
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VSSE + L + L + P
Sbjct: 230 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFRQR----VSSECQHLIRWCLALRP 275
Query: 646 AQR 648
+ R
Sbjct: 276 SDR 278
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 182
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 209
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 244
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VSSE + L + L + P
Sbjct: 245 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFR----QRVSSECQHLIRWCLALRP 290
Query: 646 AQR 648
+ R
Sbjct: 291 SDR 293
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 167
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 202
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 203 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 248
Query: 646 AQR 648
+ R
Sbjct: 249 SDR 251
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 107 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 165
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 166 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 200
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 201 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 246
Query: 646 AQR 648
+ R
Sbjct: 247 SDR 249
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 107 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 153
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 166
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 167 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 201
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 202 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 247
Query: 646 AQR 648
+ R
Sbjct: 248 SDR 250
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 108 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 154
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR------KIDCSEEINLLRACQGHPN 432
D +LG+G+Y V K TG+ A+K I + EI +L+ + H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HEN 70
Query: 433 IVNLHCVFQ-DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
I+ + + + D + D R +++ + Q + AV +H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-------------LHTPCFTLQY 538
V+HRDLKP NLL + + ++KV DFG A + ES + T Y
Sbjct: 131 SNVIHRDLKPSNLLIN--SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 539 AAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
APEV+ + Y D+WS G IL +
Sbjct: 189 RAPEVMLT-SAKYSRAMDVWSCGCILAELF 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
+++ + Q + AV +H V+HRDLKP NLL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 167
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 168 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 202
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 203 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 248
Query: 646 AQR 648
+ R
Sbjct: 249 SDR 251
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 109 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 155
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 182
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 217
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 218 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 263
Query: 646 AQR 648
+ R
Sbjct: 264 SDR 266
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 170
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 209
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 244
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VSSE + L + L + P
Sbjct: 245 ILLYDMVCGDIPF---EHDE-------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 290
Query: 646 AQR 648
+ R
Sbjct: 291 SDR 293
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 194
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 229
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VSSE + L + L + P
Sbjct: 230 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFR----QRVSSECQHLIRWCLALRP 275
Query: 646 AQR 648
+ R
Sbjct: 276 SDR 278
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 182
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 162
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 197
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 198 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 243
Query: 646 AQR 648
+ R
Sbjct: 244 SDR 246
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 150
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 94
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 95 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 154 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 210
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 211 DIWSVGCIMAELL 223
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 128 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 162
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 143 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 201
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 202 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 236
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VSSE + L + L + P
Sbjct: 237 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFR----QRVSSECQHLIRWCLALRP 282
Query: 646 AQR 648
+ R
Sbjct: 283 SDR 285
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 143 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 189
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE------EINLLRACQGHPNIVN---- 435
LG G + R + + TG++ A+K +++ EI +++ HPN+V+
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREV 80
Query: 436 ---LHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
L + +++ + + CG E ++ + +A+ ++H
Sbjct: 81 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 140
Query: 493 GVVHRDLKPENLLFSDPAGDNI--KVVDFGFAC-LKRESLHTPCF-TLQYAAPEVLRQDK 548
++HRDLKPEN++ P + K++D G+A L + L T TLQY APE+L Q K
Sbjct: 141 RIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 199
Query: 549 SGYDENCDLWSLGVI 563
Y D WS G +
Sbjct: 200 --YTVTVDYWSFGTL 212
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 917 CGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
CG E ++ + +A+ ++H ++HRDLKPEN++L
Sbjct: 116 CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 195
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 230
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VSSE + L + L + P
Sbjct: 231 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFRQR----VSSECQHLIRWCLALRP 276
Query: 646 AQR 648
+ R
Sbjct: 277 SDR 279
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 183
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 181
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 216
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VSSE + L + L + P
Sbjct: 217 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSSECQHLIRWCLALRP 262
Query: 646 AQR 648
+ R
Sbjct: 263 SDR 265
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 169
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 162
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 197
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VSSE + L + L + P
Sbjct: 198 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFR----QRVSSECQHLIRWCLALRP 243
Query: 646 AQR 648
+ R
Sbjct: 244 SDR 246
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 150
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE------EINLLRACQGHPNIVN---- 435
LG G + R + + TG++ A+K +++ EI +++ HPN+V+
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKL-NHPNVVSAREV 81
Query: 436 ---LHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
L + +++ + + CG E ++ + +A+ ++H
Sbjct: 82 PDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN 141
Query: 493 GVVHRDLKPENLLFSDPAGDNI--KVVDFGFAC-LKRESLHTPCF-TLQYAAPEVLRQDK 548
++HRDLKPEN++ P + K++D G+A L + L T TLQY APE+L Q K
Sbjct: 142 RIIHRDLKPENIVLQ-PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKK 200
Query: 549 SGYDENCDLWSLGVI 563
Y D WS G +
Sbjct: 201 --YTVTVDYWSFGTL 213
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 917 CGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
CG E ++ + +A+ ++H ++HRDLKPEN++L
Sbjct: 117 CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 195
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 230
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VSSE + L + L + P
Sbjct: 231 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFRQR----VSSECQHLIRWCLALRP 276
Query: 646 AQR 648
+ R
Sbjct: 277 SDR 279
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 183
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 97/229 (42%), Gaps = 41/229 (17%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKII---SRKIDCSEEINLLRACQG-- 429
+Y D + LG G + V K YA+K I +R++ + + ++A
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE 61
Query: 430 HPNIVNLHCVFQDE------------VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEAS- 476
HP IV + ++ V+ Y D + GRC E E S
Sbjct: 62 HPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWM--NGRCTIEERERSV 119
Query: 477 --RIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESL 529
I Q+ AV F+HS+G++HRDLKP N+ F+ D +KV DFG + +++
Sbjct: 120 CLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT--MDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 530 HTP----------CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
TP T Y +PE + + Y D++SLG+IL +L
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGN--SYSHKVDIFSLGLILFELL 224
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 3/45 (6%)
Query: 915 GRCGFTENEAS---RIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
GRC E E S I Q+ AV F+HS+G++HRDLKP N+ +
Sbjct: 108 GRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 86/192 (44%), Gaps = 13/192 (6%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
VF + + D T++ ++ Q++ + ++HS ++H
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADIIH 148
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
RDLKP NL ++ + +K++DFG + + T Y APE++ + Y++ D
Sbjct: 149 RDLKPSNLAVNEDS--ELKILDFGLCRHTDDEMTGYVATRWYRAPEIML-NWMHYNQTVD 205
Query: 557 LWSLGVILVNVL 568
+WS+G I+ +L
Sbjct: 206 IWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 66.2 bits (160), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 194
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 229
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VSSE + L + L + P
Sbjct: 230 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFRQR----VSSECQHLIRWCLALRP 275
Query: 646 AQR 648
+ R
Sbjct: 276 SDR 278
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 182
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR------KIDCSEEINLLRACQGHPN 432
D +LG+G+Y V K TG+ A+K I + EI +L+ + H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HEN 70
Query: 433 IVNLHCVFQ-DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
I+ + + + D + D R +++ + Q + AV +H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-------------LHTPCFTLQY 538
V+HRDLKP NLL + + ++KV DFG A + ES + T Y
Sbjct: 131 SNVIHRDLKPSNLLIN--SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 539 AAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
APEV+ + Y D+WS G IL +
Sbjct: 189 RAPEVMLT-SAKYSRAMDVWSCGCILAELF 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
+++ + Q + AV +H V+HRDLKP NLL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 118/281 (41%), Gaps = 32/281 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G+G+Y + + T + A+K + D EI LL+ + H NIV LH
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLH- 67
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASR-IMRQLVAAVHFMHSRGVVH 496
D +H+ D + C G + E + + QL+ + F HSR V+H
Sbjct: 68 ---DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAAPEVLRQDKSGY 551
RDLKP+NLL + +K+ DFG A + + C+ TL Y P+VL K Y
Sbjct: 125 RDLKPQNLLIN--RNGELKLADFGLA--RAFGIPVRCYSAEVVTLWYRPPDVLFGAKL-Y 179
Query: 552 DENCDLWSLGVI---LVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ D+WS G I L N R G D + L + +L T + P + D
Sbjct: 180 STSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ +++ ++L ++LL NP QRI
Sbjct: 240 PMYPATTSL-----VNVVPKLNATGRDLLQNLLKCNPVQRI 275
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HSR V+HRDLKP+NLL++
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 162
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 163 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 197
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VS E + L + L + P
Sbjct: 198 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSXECQHLIRWCLALRP 243
Query: 646 AQR 648
+ R
Sbjct: 244 SDR 246
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 104 RGALQEELARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGEL 150
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/199 (27%), Positives = 85/199 (42%), Gaps = 20/199 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
LG+G+Y + ++ T + A+K I + + E++LL+ Q H NI+ L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQ-HRNIIELKS 100
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
V H + + + + QL+ V+F HSR +HRD
Sbjct: 101 VIH---HNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRD 157
Query: 499 LKPENLLFSDPAGDN---IKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQDKSGY 551
LKP+NLL S +K+ DFG F R+ H TL Y PE+L + Y
Sbjct: 158 LKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE-IITLWYRPPEILLGSRH-Y 215
Query: 552 DENCDLWSLGVILVNVLRQ 570
+ D+WS+ I +L +
Sbjct: 216 STSVDIWSIACIWAEMLMK 234
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ V+F HSR +HRDLKP+NLLLS
Sbjct: 137 FLYQLINGVNFCHSRRCLHRDLKPQNLLLS 166
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +S+ E+ LL+ + H N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 100
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 101 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y++
Sbjct: 160 HRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 216
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 217 DIWSVGCIMAELL 229
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 134 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 168
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++D+G A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDYGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 97/200 (48%), Gaps = 22/200 (11%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + EK +G++ AVK++ R+ E+ ++R Q H N+V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQ-HFNVV 105
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + Q E + + + ++ A+ ++H++GV
Sbjct: 106 EMYKSYLVGEELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGV 162
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL------KRESLHTPCFTLQYAAPEVLRQDK 548
+HRD+K +++L + +K+ DFGF KR+ L T + APEV+ +
Sbjct: 163 IHRDIKSDSILLT--LDGRVKLSDFGFCAQISKDVPKRKXL---VGTPYWMAPEVI--SR 215
Query: 549 SGYDENCDLWSLGVILVNVL 568
S Y D+WSLG++++ ++
Sbjct: 216 SLYATEVDIWSLGIMVIEMV 235
Score = 34.7 bits (78), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ ++H++GV+HRD+K +++LL+
Sbjct: 138 LNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT 175
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 11/58 (18%)
Query: 261 IQYRRILKTEPPIPE-----DLSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFF 313
+Q + L+ PP P+ +SP + DF+ R+LV+DP+ R A+EL HPF
Sbjct: 247 VQAMKRLRDSPP-PKLKNSHKVSPVLRDFLERMLVRDPQER-----ATAQELLDHPFL 298
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 89/197 (45%), Gaps = 10/197 (5%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQ--GHPNIVNLHCVFQD 442
++G G++ V C K ++ A+K I + + I LR HPNIV L+ +
Sbjct: 15 VVGRGAFGVV--CKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 443 EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMR--QLVAAVHFMHSRGVVHRDLK 500
V + + S ++ Q VA +H M + ++HRDLK
Sbjct: 73 PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 501 PENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSL 560
P NLL G +K+ DFG AC + + + + APEV + S Y E CD++S
Sbjct: 133 PPNLLLVA-GGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF--EGSNYSEKCDVFSW 189
Query: 561 GVILVNVLRQDKSGYDE 577
G+IL V+ + K +DE
Sbjct: 190 GIILWEVITRRKP-FDE 205
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q VA +H M + ++HRDLKP NLLL G ++KI
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLLVA-GGTVLKI 147
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 87/210 (41%), Gaps = 24/210 (11%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISR------KIDCSEEINLLRACQGHPN 432
D +LG+G+Y V K TG+ A+K I + EI +L+ + H N
Sbjct: 12 DFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HEN 70
Query: 433 IVNLHCVFQ-DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHS 491
I+ + + + D + D R +++ + Q + AV +H
Sbjct: 71 IITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLHG 130
Query: 492 RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES-------------LHTPCFTLQY 538
V+HRDLKP NLL + + ++KV DFG A + ES + T Y
Sbjct: 131 SNVIHRDLKPSNLLIN--SNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 539 AAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
APEV+ + Y D+WS G IL +
Sbjct: 189 RAPEVMLT-SAKYSRAMDVWSCGCILAELF 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
+++ + Q + AV +H V+HRDLKP NLL++
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINS 147
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 95/201 (47%), Gaps = 16/201 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G G+ ++ +TGQE A++ ++ +K EI ++R + +PNIVN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSY 87
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + + C E + + + R+ + A+ F+HS V+HR++K
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQALEFLHSNQVIHRNIK 144
Query: 501 PENLLFSDPAGDNIKVVDFGFACL---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDL 557
+N+L ++K+ DFGF ++ T T + APEV+ + Y D+
Sbjct: 145 SDNILLG--MDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV--TRKAYGPKVDI 200
Query: 558 WSLGVILVNVLRQDKSGYDEN 578
WSLG++ + ++ + +EN
Sbjct: 201 WSLGIMAIEMIEGEPPYLNEN 221
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E + + + R+ + A+ F+HS V+HR++K +N+LL G+ G++
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILL-GMDGSV 156
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 97
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 153
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 154 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 211
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 212 YTSSIDVWSAGCVLAELL 229
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 119
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 175
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 176 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 233
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 234 YTSSIDVWSAGCVLAELL 251
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G G+ ++ +TGQE A++ ++ +K EI ++R + +PNIVN +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSY 86
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + + C E + + + R+ + A+ F+HS V+HRD+K
Sbjct: 87 LVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQALEFLHSNQVIHRDIK 143
Query: 501 PENLLFSDPAGDNIKVVDFGFACL------KRESLHTPCFTLQYAAPEVLRQDKSGYDEN 554
+N+L ++K+ DFGF KR + T + APEV+ + Y
Sbjct: 144 SDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVT--RKAYGPK 196
Query: 555 CDLWSLGVILVNVLRQDKSGYDEN 578
D+WSLG++ + ++ + +EN
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNEN 220
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E + + + R+ + A+ F+HS V+HRD+K +N+LL G+ G++
Sbjct: 115 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-GMDGSV 155
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 39 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 97
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 98 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 153
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 154 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 211
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 212 YTSSIDVWSAGCVLAELL 229
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 140 MYQLFRSLAYIHSFGICHRDIKPQNLLL 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 46 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 104
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 105 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 160
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 161 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 218
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 219 YTSSIDVWSAGCVLAELL 236
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 147 MYQLFRSLAYIHSFGICHRDIKPQNLLL 174
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 95/204 (46%), Gaps = 22/204 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G G+ ++ +TGQE A++ ++ +K EI ++R + +PNIVN +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLDSY 87
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + + C E + + + R+ + A+ F+HS V+HRD+K
Sbjct: 88 LVGDELWVVMEYLAGGSLTDVVTET--C-MDEGQIAAVCRECLQALEFLHSNQVIHRDIK 144
Query: 501 PENLLFSDPAGDNIKVVDFGFACL------KRESLHTPCFTLQYAAPEVLRQDKSGYDEN 554
+N+L ++K+ DFGF KR + T + APEV+ + Y
Sbjct: 145 SDNILLG--MDGSVKLTDFGFCAQITPEQSKRSXM---VGTPYWMAPEVVT--RKAYGPK 197
Query: 555 CDLWSLGVILVNVLRQDKSGYDEN 578
D+WSLG++ + ++ + +EN
Sbjct: 198 VDIWSLGIMAIEMIEGEPPYLNEN 221
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 30/42 (71%), Gaps = 1/42 (2%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
E + + + R+ + A+ F+HS V+HRD+K +N+LL G+ G++
Sbjct: 116 EGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILL-GMDGSV 156
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 156 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 214
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 215 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 249
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VS E + L + L + P
Sbjct: 250 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFRQR----VSXECQHLIRWCLALRP 295
Query: 646 AQR 648
+ R
Sbjct: 296 SDR 298
Score = 33.9 bits (76), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 156 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 202
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 35 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 93
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 94 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 149
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 150 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 207
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 208 YTSSIDVWSAGCVLAELL 225
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 136 MYQLFRSLAYIHSFGICHRDIKPQNLLL 163
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 181
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 182 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 216
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VS E + L + L + P
Sbjct: 217 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSXECQHLIRWCLALRP 262
Query: 646 AQR 648
+ R
Sbjct: 263 SDR 265
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 123 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 169
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 55 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 113
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 114 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 169
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 170 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 227
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 228 YTSSIDVWSAGCVLAELL 245
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 156 MYQLFRSLAYIHSFGICHRDIKPQNLLL 183
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 182
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 217
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VS E + L + L + P
Sbjct: 218 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSXECQHLIRWCLALRP 263
Query: 646 AQR 648
+ R
Sbjct: 264 SDR 266
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 170
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 131 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 189
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 190 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 224
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VS E + L + L + P
Sbjct: 225 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFR----QRVSXECQHLIRWCLALRP 270
Query: 646 AQR 648
+ R
Sbjct: 271 SDR 273
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 131 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 177
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 195
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 230
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VS E + L + L + P
Sbjct: 231 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFR----QRVSXECQHLIRWCLALRP 276
Query: 646 AQR 648
+ R
Sbjct: 277 SDR 279
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 183
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 61 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 119
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 120 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 175
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 176 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 233
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 234 YTSSIDVWSAGCVLAELL 251
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 162 MYQLFRSLAYIHSFGICHRDIKPQNLLL 189
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 209
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 210 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 244
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ I GQ F VS E + L + L + P
Sbjct: 245 ILLYDMVCGDIPF---EHDEE-------IIRGQVFFR----QRVSXECQHLIRWCLALRP 290
Query: 646 AQR 648
+ R
Sbjct: 291 SDR 293
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 151 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 197
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 194
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 195 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 229
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VS E + L + L + P
Sbjct: 230 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFR----QRVSXECQHLIRWCLALRP 275
Query: 646 AQR 648
+ R
Sbjct: 276 SDR 278
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 136 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 182
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 106 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 164
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 165 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 220
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 221 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 278
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 279 YTSSIDVWSAGCVLAELL 296
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 207 MYQLFRSLAYIHSFGICHRDIKPQNLLL 234
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 65 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 123
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 124 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 179
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 180 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 237
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 238 YTSSIDVWSAGCVLAELL 255
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 166 MYQLFRSLAYIHSFGICHRDIKPQNLLL 193
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 63 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 121
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 122 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 177
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 178 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 235
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 236 YTSSIDVWSAGCVLAELL 253
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 164 MYQLFRSLAYIHSFGICHRDIKPQNLLL 191
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISRKIDCSE----EINL 423
G E+Y++ G LG+G++ C++ + G+ + A+KII E EIN+
Sbjct: 14 GDWLQERYEI----VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINV 69
Query: 424 LRACQGHPNIVNLHCVFQDEVHTYXXXX----XXXXXXXXDRIRQKGRCGFTENEASRIM 479
L+ + CV + + + +++ + +
Sbjct: 70 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 129
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-----------------NIKVVDFGFA 522
QL A+ F+H + H DLKPEN+LF + + +I+V DFG A
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189
Query: 523 CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLR 569
E T T Y PEV+ + G+ + CD+WS+G IL R
Sbjct: 190 TFDHEHHTTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYR 234
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLL 955
QL A+ F+H + H DLKPEN+L
Sbjct: 131 QLCHALRFLHENQLTHTDLKPENILF 156
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 31 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 89
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 90 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 145
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 146 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 203
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 204 YTSSIDVWSAGCVLAELL 221
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 132 MYQLFRSLAYIHSFGICHRDIKPQNLLL 159
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 28 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 86
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 87 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 142
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 143 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 200
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 201 YTSSIDVWSAGCVLAELL 218
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 129 MYQLFRSLAYIHSFGICHRDIKPQNLLL 156
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 195
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 196 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 230
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF D+ + GQ F VS E + L + L + P
Sbjct: 231 ILLYDMVCGDIPF---EHDEEIIG-------GQVFFRQR----VSXECQHLIRWCLALRP 276
Query: 646 AQR 648
+ R
Sbjct: 277 SDR 279
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 137 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 183
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 386 LGDGSY-SVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLH 437
+G G+Y SVC KS G + AVK +SR E+ LL+ + H N++ L
Sbjct: 59 VGSGAYGSVCSSYDVKS-GLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLL 116
Query: 438 CVFQ--DEVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGV 494
VF + + D + +C T++ ++ Q++ + ++HS +
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 175
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDEN 554
+HRDLKP NL ++ +K++DFG A + + T Y APE++ + Y+
Sbjct: 176 IHRDLKPSNLAVNEDC--ELKILDFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNMT 232
Query: 555 CDLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 233 VDIWSVGCIMAELL 246
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 151 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 185
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISRKIDCSE----EINL 423
G E+Y++ G LG+G++ C++ + G+ + A+KII E EIN+
Sbjct: 46 GDWLQERYEI----VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINV 101
Query: 424 LRACQGHPNIVNLHCVFQDEVHTYXXXX----XXXXXXXXDRIRQKGRCGFTENEASRIM 479
L+ + CV + + + +++ + +
Sbjct: 102 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 161
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-----------------NIKVVDFGFA 522
QL A+ F+H + H DLKPEN+LF + + +I+V DFG A
Sbjct: 162 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 221
Query: 523 CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLR 569
E T T Y PEV+ + G+ + CD+WS+G IL R
Sbjct: 222 TFDHEHHTTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYR 266
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLL 955
QL A+ F+H + H DLKPEN+L
Sbjct: 163 QLCHALRFLHENQLTHTDLKPENILF 188
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 93/227 (40%), Gaps = 32/227 (14%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISRKIDCSE----EINL 423
G E+Y++ G LG+G++ C++ + G+ + A+KII E EIN+
Sbjct: 23 GDWLQERYEI----VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARLEINV 78
Query: 424 LRACQGHPNIVNLHCVFQDEVHTYXXXX----XXXXXXXXDRIRQKGRCGFTENEASRIM 479
L+ + CV + + + +++ + +
Sbjct: 79 LKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMA 138
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGD-----------------NIKVVDFGFA 522
QL A+ F+H + H DLKPEN+LF + + +I+V DFG A
Sbjct: 139 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 198
Query: 523 CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLR 569
E T T Y PEV+ + G+ + CD+WS+G IL R
Sbjct: 199 TFDHEHHTTIVATRHYRPPEVILE--LGWAQPCDVWSIGCILFEYYR 243
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLL 955
QL A+ F+H + H DLKPEN+L
Sbjct: 140 QLCHALRFLHENQLTHTDLKPENILF 165
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 32 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 90
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 91 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 146
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 147 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 204
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 205 YTSSIDVWSAGCVLAELL 222
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 133 MYQLFRSLAYIHSFGICHRDIKPQNLLL 160
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 40 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 98
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 99 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 154
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 155 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 212
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 213 YTSSIDVWSAGCVLAELL 230
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 141 MYQLFRSLAYIHSFGICHRDIKPQNLLL 168
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++DF A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDFYLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 83/192 (43%), Gaps = 10/192 (5%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI----DCSEEINLLRACQGHPNIVNLHCVF 440
++G G + + + Q A+K++ + +EEI +L + ++ +
Sbjct: 104 VIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIH 163
Query: 441 QDEVHTYX----XXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
E T+ + I++ GF+ + ++ + +H ++H
Sbjct: 164 MLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIH 223
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCD 556
DLKPEN+L IKV+DFG +C + + ++ + Y APEV+ + Y D
Sbjct: 224 CDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGAR--YGMPID 281
Query: 557 LWSLGVILVNVL 568
+WSLG IL +L
Sbjct: 282 MWSLGCILAELL 293
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 78/183 (42%), Gaps = 41/183 (22%)
Query: 467 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
R E A Q++ AV H+ GV+HRD+K EN+L G+ +K++DFG L +
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGE-LKLIDFGSGALLK 182
Query: 527 ESLHTPC-FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLG 585
++++T T Y+ PE +R + + + +WSLG
Sbjct: 183 DTVYTDFDGTRVYSPPEWIRYHRY-------------------------HGRSAAVWSLG 217
Query: 586 VILYTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNP 645
++LY M+CG +PF I GQ F VS E + L + L + P
Sbjct: 218 ILLYDMVCGDIPFEHDE----------EIIRGQVFFR----QRVSXECQHLIRWCLALRP 263
Query: 646 AQR 648
R
Sbjct: 264 XDR 266
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 25/47 (53%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNL 962
R E A Q++ AV H+ GV+HRD+K EN+L+ G L
Sbjct: 124 RGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGEL 170
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++ FG A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILGFGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLHCVF--- 440
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L F
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 441 ---QDEVHT-----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+DEV+ Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 99/246 (40%), Gaps = 30/246 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCS-EEINLLRACQGHPNIVNLHC 438
ILG G+ + R K TG +A+K+ + R +D E +L+ H NIV L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFA 74
Query: 439 VFQDEV--HTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
+ ++ H + + G E+E ++R +V ++ + G+V
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 496 HRDLKPENLL--FSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
HR++KP N++ + K+ DFG A RE F Y E L D Y+
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVXLYGTEEYLHPDM--YER 189
Query: 554 NCDLWSLGVILVNVLRQD-KSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
VLR+D + Y DLWS+GV Y G +PF +M
Sbjct: 190 A------------VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 613 RIKEGQ 618
+I G+
Sbjct: 238 KIITGK 243
Score = 33.9 bits (76), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
G E+E ++R +V ++ + G+VHR++KP N++
Sbjct: 108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 64/133 (48%), Gaps = 31/133 (23%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR-----ESLHTP 532
I RQ + ++H++ ++HRD+K N+ + G +K+ DFG A +K + + P
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFLHE--GLTVKIGDFGLATVKSRWSGSQQVEQP 194
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QD + + D++S G++LY ++
Sbjct: 195 TGSVLWMAPEVIRM-----------------------QDNNPFSFQSDVYSYGIVLYELM 231
Query: 593 CGRVPF-HARSRD 604
G +P+ H +RD
Sbjct: 232 TGELPYSHINNRD 244
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRD+K N+ L
Sbjct: 137 IARQTAQGMDYLHAKNIIHRDMKSNNIFL 165
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 118/281 (41%), Gaps = 32/281 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G+G+Y + + T + A+K + D EI LL+ + H NIV LH
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELK-HKNIVRLH- 67
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASR-IMRQLVAAVHFMHSRGVVH 496
D +H+ D + C G + E + + QL+ + F HSR V+H
Sbjct: 68 ---DVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLH 124
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAAPEVLRQDKSGY 551
RDLKP+NLL + +K+ +FG A + + C+ TL Y P+VL K Y
Sbjct: 125 RDLKPQNLLIN--RNGELKLANFGLA--RAFGIPVRCYSAEVVTLWYRPPDVLFGAKL-Y 179
Query: 552 DENCDLWSLGVI---LVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSAL 608
+ D+WS G I L N R G D + L + +L T + P + D
Sbjct: 180 STSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPY 239
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRI 649
+ +++ ++L ++LL NP QRI
Sbjct: 240 PMYPATTSL-----VNVVPKLNATGRDLLQNLLKCNPVQRI 275
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + F HSR V+HRDLKP+NLL++
Sbjct: 106 FLFQLLKGLGFCHSRNVLHRDLKPQNLLIN 135
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 22/110 (20%)
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CL 524
+E R+ RQ++ A+ ++HS+G++HR+LKP N+ + N+K+ DFG A L
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFIDESR--NVKIGDFGLAKNVHRSLDIL 173
Query: 525 KRESLHTP---------CFTLQYAAPEVLRQDKSG-YDENCDLWSLGVIL 564
K +S + P T Y A EVL D +G Y+E D +SLG+I
Sbjct: 174 KLDSQNLPGSSDNLTSAIGTAXYVATEVL--DGTGHYNEKIDXYSLGIIF 221
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 27/34 (79%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+E R+ RQ++ A+ ++HS+G++HR+LKP N+ +
Sbjct: 116 DEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI 149
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.5 bits (153), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 99/246 (40%), Gaps = 30/246 (12%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIIS-----RKIDCS-EEINLLRACQGHPNIVNLHC 438
ILG G+ + R K TG +A+K+ + R +D E +L+ H NIV L
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLN-HKNIVKLFA 74
Query: 439 VFQDEV--HTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
+ ++ H + + G E+E ++R +V ++ + G+V
Sbjct: 75 IEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIV 134
Query: 496 HRDLKPENLL--FSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDE 553
HR++KP N++ + K+ DFG A RE F Y E L D Y+
Sbjct: 135 HRNIKPGNIMRVIGEDGQSVYKLTDFGAA---RELEDDEQFVSLYGTEEYLHPDM--YER 189
Query: 554 NCDLWSLGVILVNVLRQD-KSGYDENCDLWSLGVILYTMLCGRVPFHARSRDDSALSIMA 612
VLR+D + Y DLWS+GV Y G +PF +M
Sbjct: 190 A------------VLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMY 237
Query: 613 RIKEGQ 618
+I G+
Sbjct: 238 KIITGK 243
Score = 33.5 bits (75), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 24/37 (64%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
G E+E ++R +V ++ + G+VHR++KP N++
Sbjct: 108 GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIM 144
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++D G A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDAGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 55/304 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCS----EEINLLRACQGHPNIVNL--- 436
+L +G ++ + +G+EYA+K ++S + + + +E+ ++ GHPNIV
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRI-----RQKGRCGFTENEASRIMRQLVAAVHFMHS 491
+ ++E T ++ + + R + + +I Q AV MH
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 492 RG--VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ-----YAAPEVL 544
+ ++HRDLK ENLL S+ IK+ DFG A H P ++ E+
Sbjct: 155 QKPPIIHRDLKVENLLLSNQG--TIKLCDFGSATTIS---HYPDYSWSAQRRALVEEEIT 209
Query: 545 RQDKSGY--DENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARS 602
R Y E DL+S I E D+W+LG ILY + + PF
Sbjct: 210 RNTTPMYRTPEIIDLYSNFPI------------GEKQDIWALGCILYLLCFRQHPFE--- 254
Query: 603 RDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHAFH 662
D + L RI G+++ T + L +++L VNP +R+ + V H
Sbjct: 255 -DGAKL----RIVNGKYSIPPH--DTQYTVFHSLIRAMLQVNPEERLSIAEV------VH 301
Query: 663 QAQK 666
Q Q+
Sbjct: 302 QLQE 305
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 5/66 (7%)
Query: 123 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCS----EEINLLRACQGHPNICRRCVE 177
+L +G ++ + +G+EYA+K ++S + + + +E+ ++ GHPNI + C
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 178 KSTGQE 183
S G+E
Sbjct: 95 ASIGKE 100
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)
Query: 926 RIMRQLVAAVHFMHSRG--VVHRDLKPENLLLS 956
+I Q AV MH + ++HRDLK ENLLLS
Sbjct: 140 KIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++D G A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDGGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 88/193 (45%), Gaps = 15/193 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKID-------CSEEINLLRACQGHPNIVNLHC 438
+G G+Y + TG AVK +SR E+ LL+ + H N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMK-HENVIGLLD 88
Query: 439 VFQD--EVHTYXXXXXXXXXXXXDRIRQKGRC-GFTENEASRIMRQLVAAVHFMHSRGVV 495
VF + + D + +C T++ ++ Q++ + ++HS ++
Sbjct: 89 VFTPARSLEEFNDVYLVTHLMGAD-LNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENC 555
HRDLKP NL ++ +K++D G A + + T Y APE++ + Y++
Sbjct: 148 HRDLKPSNLAVNEDC--ELKILDRGLARHTDDEMTGYVATRWYRAPEIML-NWMHYNQTV 204
Query: 556 DLWSLGVILVNVL 568
D+WS+G I+ +L
Sbjct: 205 DIWSVGCIMAELL 217
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 23/35 (65%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENL 953
T++ ++ Q++ + ++HS ++HRDLKP NL
Sbjct: 122 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL 156
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKID-----CSEEINLLRACQGH 430
+K LG+G ++ + +K+T Q A+K I S D EI LL+ H
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELS-H 71
Query: 431 PNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
PNI+ L F + + + I + T + M + + ++H
Sbjct: 72 PNIIGLLDAFGHKSNI--SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH 129
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFG----FACLKRESLHTPCFTLQYAAPEVLRQ 546
++HRDLKP NLL + +K+ DFG F R H T Y APE+L
Sbjct: 130 QHWILHRDLKPNNLLLDE--NGVLKLADFGLAKSFGSPNRAYXHQ-VVTRWYRAPELLFG 186
Query: 547 DKSGYDENCDLWSLGVILVNVL 568
+ Y D+W++G IL +L
Sbjct: 187 ARM-YGVGVDMWAVGCILAELL 207
Score = 33.1 bits (74), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T + M + + ++H ++HRDLKP NLLL
Sbjct: 109 LTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL 145
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRAC------QGHPN 432
DL G +G G+Y + V K +GQ AVK I +D E+ LL P
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV-----H 487
IV + E + D+ + + I+ ++ A H
Sbjct: 83 IVQFYGALFREGDCWICMELMSTSF--DKFYKYVYSVLDDVIPEEILGKITLATVKALNH 140
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP--CFTLQYAAPEVLR 545
+ ++HRD+KP N+L D +G NIK+ DFG + +S+ Y APE R
Sbjct: 141 LKENLKIIHRDIKPSNILL-DRSG-NIKLCDFGISGQLVDSIAKTRDAGCRPYMAPE--R 196
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
D S + GYD D+WSLG+ LY + GR P+
Sbjct: 197 IDPSA--------------------SRQGYDVRSDVWSLGITLYELATGRFPY 229
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 24/46 (52%)
Query: 117 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL 162
DL G +G G+Y + V K +GQ AVK I +D E+ LL
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLL 68
Score = 30.0 bits (66), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 10/41 (24%)
Query: 933 AAVHFMHSRGVVHRDLKPENLLLS----------GISGNLI 963
A H + ++HRD+KP N+LL GISG L+
Sbjct: 137 ALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLV 177
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 97/203 (47%), Gaps = 22/203 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIVNLHCVF 440
+G+GS + EK TG++ AVK + R+ E+ ++R H N+V+++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYH-HDNVVDMYSSY 111
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ D + E + + + ++ A+ ++H++GV+HRD+K
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIK 168
Query: 501 PENLLFSDPAGDNIKVVDFGFACL------KRESLHTPCFTLQYAAPEVLRQDKSGYDEN 554
+++L + + IK+ DFGF KR+ L T + APEV+ + Y
Sbjct: 169 SDSILLT--SDGRIKLSDFGFCAQVSKEVPKRKXL---VGTPYWMAPEVI--SRLPYGTE 221
Query: 555 CDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 222 VDIWSLGIMVIEMIDGEPPYFNE 244
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ ++H++GV+HRD+K +++LL+
Sbjct: 138 MNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT 175
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 62.8 bits (151), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 121/280 (43%), Gaps = 42/280 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQ--------GHPNIVNL- 436
LG+G +S G YA+K +I C E+ + A + HPNI+ L
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALK----RILCHEQQDREEAQREADMHRLFNHPNILRLV 92
Query: 437 -HCVFQ-----DEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
+C+ + + +R++ KG TE++ ++ + + +H
Sbjct: 93 AYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNF-LTEDQILWLLLGICRGLEAIH 151
Query: 491 SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSG 550
++G HRDLKP N+L D G + ++D G S++ C ++ + + QD +
Sbjct: 152 AKGYAHRDLKPTNILLGD-EGQPV-LMDLG-------SMNQACIHVEGSRQALTLQDWAA 202
Query: 551 YDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHA--RSRDDSAL 608
+ C + L +V Q DE D+WSLG +LY M+ G P+ + D AL
Sbjct: 203 --QRCTISYRAPELFSV--QSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
Query: 609 SIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
++ ++ Q SS +L S++TV+P QR
Sbjct: 259 AVQNQLSIPQS-------PRHSSALWQLLNSMMTVDPHQR 291
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+R++ KG TE++ ++ + + +H++G HRDLKP N+LL
Sbjct: 122 ERLKDKGNF-LTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG 168
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 406 YAVKIISR---KIDCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRI 462
YA+K I + EI LLR + HPN+++L VF I
Sbjct: 51 YALKQIEGTGISMSACREIALLRELK-HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHI 109
Query: 463 RQKGRCGFTENEASRIMR--------QLVAAVHFMHSRGVVHRDLKPENLLF--SDPAGD 512
+ R + ++ R Q++ +H++H+ V+HRDLKP N+L P
Sbjct: 110 IKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 169
Query: 513 NIKVVDFGFACLKRE------SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVN 566
+K+ D GFA L L T Y APE+L + Y + D+W++G I
Sbjct: 170 RVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARH-YTKAIDIWAIGCIFAE 228
Query: 567 VL 568
+L
Sbjct: 229 LL 230
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 24/31 (77%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSG 957
++ Q++ +H++H+ V+HRDLKP N+L+ G
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMG 163
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 21/198 (10%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVK-IISRKIDCSEEINLLRACQGHPNIVNLH------ 437
++G+GS+ V + +G+ A+K ++ K + E+ ++R H NIV L
Sbjct: 27 VIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLD-HCNIVRLRYFFYSS 85
Query: 438 -----CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
V+ + V Y R +Q + + M QL ++ ++HS
Sbjct: 86 GEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVK----LYMYQLFRSLAYIHSF 141
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVLRQDKSG 550
G+ HRD+KP+NLL DP +K+ DFG A ++ E + + Y APE++ +
Sbjct: 142 GICHRDIKPQNLLL-DPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIF-GATD 199
Query: 551 YDENCDLWSLGVILVNVL 568
Y + D+WS G +L +L
Sbjct: 200 YTSSIDVWSAGCVLAELL 217
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
M QL ++ ++HS G+ HRD+KP+NLLL
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLL 155
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 88/196 (44%), Gaps = 17/196 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS---RKIDCSE---EINLLRACQGHPNIVNLHCV 439
+G+G+Y + + A+K IS + C EI +L A + H NI+ ++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-HENIIGINDI 91
Query: 440 FQD-EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+ + D + + + + Q++ + ++HS V+HRD
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYA------APEVLRQDKSGYD 552
LKP NLL + + ++K+ DFG A + F +Y APE++ K GY
Sbjct: 152 LKPSNLLLNTTS--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK-GYT 208
Query: 553 ENCDLWSLGVILVNVL 568
++ D+WS+G IL +L
Sbjct: 209 KSIDIWSVGCILAEML 224
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
+ Q++ + ++HS V+HRDLKP NLLL+ S
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTS 163
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-------IDCSEEINLLRACQGHPNI 433
+K +G G++ + + TGQ+ A+K + + I EI +L+ + H N+
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENV 79
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXX------XDRIRQKGRCGFTENEASRIMRQLVAAVH 487
VNL + + + Y + FT +E R+M+ L+ ++
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRES----LHTPCFTLQYAA 540
++H ++HRD+K N+L + +K+ DFG A L + S TL Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQD--KSGYDENCDLWSLGVILYTMLCGRV-P 597
PE+L ++ Y DLW G I+ + + G E L L + LCG + P
Sbjct: 198 PELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-----ALISQLCGSITP 251
Query: 598 FHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSE--AKELTKSLLTVNPAQRI 649
+ D+ L + +GQ + + A +L LL ++PAQRI
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
FT +E R+M+ L+ ++++H ++HRD+K N+L++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 194 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 230
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 231 TGQLPYSNINNRDQIIFMVGR 251
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 136 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 164
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 195 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 231
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 232 TGQLPYSNINNRDQIIFMVGR 252
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 165
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 172 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 208
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 209 TGQLPYSNINNRDQIIFMVGR 229
Score = 32.7 bits (73), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 142
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + + +K+ DFG A +K + F
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATVKSRWSGSHQFEQL 170
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QD + Y D+++ G++LY ++
Sbjct: 171 SGSILWMAPEVIRM-----------------------QDSNPYSFQSDVYAFGIVLYELM 207
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 208 TGQLPYSNINNRDQIIEMVGR 228
Score = 32.7 bits (73), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 113 IARQTARGMDYLHAKSIIHRDLKSNNIFL 141
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 168
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 169 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 205
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 206 TGQLPYSNINNRDQIIFMVGR 226
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 111 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 139
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-------IDCSEEINLLRACQGHPNI 433
+K +G G++ + + TGQ+ A+K + + I EI +L+ + H N+
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENV 79
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXX------XDRIRQKGRCGFTENEASRIMRQLVAAVH 487
VNL + + + Y + FT +E R+M+ L+ ++
Sbjct: 80 VNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRES----LHTPCFTLQYAA 540
++H ++HRD+K N+L + +K+ DFG A L + S TL Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQD--KSGYDENCDLWSLGVILYTMLCGRV-P 597
PE+L ++ Y DLW G I+ + + G E L L + LCG + P
Sbjct: 198 PELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-----ALISQLCGSITP 251
Query: 598 FHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSE--AKELTKSLLTVNPAQRI 649
+ D+ L + +GQ + + A +L LL ++PAQRI
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
FT +E R+M+ L+ ++++H ++HRD+K N+L++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 171
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 172 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 208
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 209 TGQLPYSNINNRDQIIFMVGR 229
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 114 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 142
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 167 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 203
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 204 TGQLPYSNINNRDQIIFMVGR 224
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-------IDCSEEINLLRACQGHPNI 433
+K +G G++ + + TGQ+ A+K + + I EI +L+ + H N+
Sbjct: 20 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENV 78
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXX------XDRIRQKGRCGFTENEASRIMRQLVAAVH 487
VNL + + + Y + FT +E R+M+ L+ ++
Sbjct: 79 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 138
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRES----LHTPCFTLQYAA 540
++H ++HRD+K N+L + +K+ DFG A L + S TL Y
Sbjct: 139 YIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 196
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQD--KSGYDENCDLWSLGVILYTMLCGRV-P 597
PE+L ++ Y DLW G I+ + + G E L L + LCG + P
Sbjct: 197 PELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-----ALISQLCGSITP 250
Query: 598 FHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSE--AKELTKSLLTVNPAQRI 649
+ D+ L + +GQ + + A +L LL ++PAQRI
Sbjct: 251 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
FT +E R+M+ L+ ++++H ++HRD+K N+L++
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 158
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A +K + F
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATVKSRWSGSHQFEQL 166
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 167 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 203
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 204 TGQLPYSNINNRDQIIFMVGR 224
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/223 (25%), Positives = 90/223 (40%), Gaps = 38/223 (17%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDCSE---EINLLRACQGHPNIVNLH 437
++G GSY +K+T + A+K ++R IDC EI +L + I
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQ-KGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
+ D++ + D + K TE I+ L+ +F+H G++H
Sbjct: 93 LIIPDDLLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIH 152
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFA--------------------------CLKRESLH 530
RDLKP N L + +KV DFG A LK++ L
Sbjct: 153 RDLKPANCLLNQDCS--VKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQ-LT 209
Query: 531 TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
+ T Y APE++ + Y ++ D+WS G I +L +S
Sbjct: 210 SHVVTRWYRAPELILL-QENYTKSIDIWSTGCIFAELLNMLQS 251
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE I+ L+ +F+H G++HRDLKP N LL+
Sbjct: 126 LTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLN 163
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR-ESLHTPCF-- 534
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + E HT
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLINTTC--DLKICDFGLARIADPEHDHTGFLTE 206
Query: 535 ---TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
T Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 207 XVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 242
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLL++
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLIN 178
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 122/294 (41%), Gaps = 34/294 (11%)
Query: 381 DKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRK-------IDCSEEINLLRACQGHPNI 433
+K +G G++ + + TGQ+ A+K + + I EI +L+ + H N+
Sbjct: 21 EKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLK-HENV 79
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXX------XDRIRQKGRCGFTENEASRIMRQLVAAVH 487
VNL + + + Y + FT +E R+M+ L+ ++
Sbjct: 80 VNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLY 139
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA---CLKRES----LHTPCFTLQYAA 540
++H ++HRD+K N+L + +K+ DFG A L + S TL Y
Sbjct: 140 YIHRNKILHRDMKAANVLITRDG--VLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRP 197
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVLRQD--KSGYDENCDLWSLGVILYTMLCGRV-P 597
PE+L ++ Y DLW G I+ + + G E L L + LCG + P
Sbjct: 198 PELLLGERD-YGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQL-----ALISQLCGSITP 251
Query: 598 FHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSE--AKELTKSLLTVNPAQRI 649
+ D+ L + +GQ + + A +L LL ++PAQRI
Sbjct: 252 EVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
FT +E R+M+ L+ ++++H ++HRD+K N+L++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT 159
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 87/196 (44%), Gaps = 17/196 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS---RKIDCSE---EINLLRACQGHPNIVNLHCV 439
+G+G+Y + + A+K IS + C EI +L A + H NI+ ++ +
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFR-HENIIGINDI 91
Query: 440 FQD-EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+ + D + + + + Q++ + ++HS V+HRD
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRD 151
Query: 499 LKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYA------APEVLRQDKSGYD 552
LKP NLL + ++K+ DFG A + F +Y APE++ K GY
Sbjct: 152 LKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSK-GYT 208
Query: 553 ENCDLWSLGVILVNVL 568
++ D+WS+G IL +L
Sbjct: 209 KSIDIWSVGCILAEML 224
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 212
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 213 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 257
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 258 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 313 ISI--PELLAHPYVQIQ 327
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 112 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 168
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 169 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 213
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 214 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 268
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 269 ISI--PELLAHPYVQIQ 283
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 112 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 144
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 212
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 213 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 257
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 258 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 313 ISI--PELLAHPYVQIQ 327
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 165
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 166 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 210
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 211 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 265
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 266 ISI--PELLAHPYVQIQ 280
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 109 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 141
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCVFQDE 443
LG GS+ R +K TG + AVK + ++ +EE L AC G P IV L+ ++
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE---LMACAGLTSPRIVPLYGAVREG 157
Query: 444 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
++++G C E+ A + Q + + ++HSR ++H D+K +N
Sbjct: 158 PWVNIFMELLEGGSLGQLVKEQG-C-LPEDRALYYLGQALEGLEYLHSRRILHGDVKADN 215
Query: 504 LLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQY-------AAPEVLRQDKSGYDENC 555
+L S G + + DFG A CL+ + L T Y APEV+ D
Sbjct: 216 VLLSS-DGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSC--DAKV 272
Query: 556 DLWSLGVILVNVL 568
D+WS +++++L
Sbjct: 273 DVWSSCCMMLHML 285
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E+ A + Q + + ++HSR ++H D+K +N+LLS
Sbjct: 182 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 219
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH--- 530
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDXXXVV 184
Query: 531 --TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 185 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 229
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 230 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 285 ISI--PELLAHPYVQIQ 299
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 108 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 164
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 165 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 209
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 210 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 264
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 265 ISI--PELLAHPYVQIQ 279
Score = 36.6 bits (83), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 108 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 140
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 114/284 (40%), Gaps = 31/284 (10%)
Query: 383 AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE---EINLLRACQGHPNIVNLHCV 439
AG+ +G +R V + V I+S C EI LL HPNI+ L +
Sbjct: 40 AGVDSEGIPVAIKR-VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDI 97
Query: 440 F----QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
F + +H I + R + M ++ +H +H GVV
Sbjct: 98 FVHFEEPAMHKLYLVTELMRTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVV 156
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ--YAAPEVLRQDKSGYDE 553
HRDL P N+L +D ++I + DF A + + Y APE++ Q K G+ +
Sbjct: 157 HRDLHPGNILLAD--NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK-GFTK 213
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGR----VPFHARSRDDSALS 609
D+WS G ++ + + K+ + + L I+ + + V F + S D
Sbjct: 214 LVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY--- 269
Query: 610 IMARIKEGQFNFDAEAWSTVSSEAK----ELTKSLLTVNPAQRI 649
++ N A AW+ V A +L +L NP +RI
Sbjct: 270 ----LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
M ++ +H +H GVVHRDL P N+LL+
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 90/193 (46%), Gaps = 18/193 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCVFQDE 443
LG GS+ R +K TG + AVK + ++ +EE L AC G P IV L+ ++
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEE---LMACAGLTSPRIVPLYGAVREG 138
Query: 444 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
++++G C E+ A + Q + + ++HSR ++H D+K +N
Sbjct: 139 PWVNIFMELLEGGSLGQLVKEQG-C-LPEDRALYYLGQALEGLEYLHSRRILHGDVKADN 196
Query: 504 LLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQY-------AAPEVLRQDKSGYDENC 555
+L S G + + DFG A CL+ + L T Y APEV+ D
Sbjct: 197 VLLSS-DGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSC--DAKV 253
Query: 556 DLWSLGVILVNVL 568
D+WS +++++L
Sbjct: 254 DVWSSCCMMLHML 266
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E+ A + Q + + ++HSR ++H D+K +N+LLS
Sbjct: 163 LPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLS 200
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 114/284 (40%), Gaps = 31/284 (10%)
Query: 383 AGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE---EINLLRACQGHPNIVNLHCV 439
AG+ +G +R V + V I+S C EI LL HPNI+ L +
Sbjct: 40 AGVDSEGIPVAIKR-VFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFH-HPNILGLRDI 97
Query: 440 F----QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
F + +H I + R + M ++ +H +H GVV
Sbjct: 98 FVHFEEPAMHKLYLVTELMRTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVV 156
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ--YAAPEVLRQDKSGYDE 553
HRDL P N+L +D ++I + DF A + + Y APE++ Q K G+ +
Sbjct: 157 HRDLHPGNILLAD--NNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQFK-GFTK 213
Query: 554 NCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGR----VPFHARSRDDSALS 609
D+WS G ++ + + K+ + + L I+ + + V F + S D
Sbjct: 214 LVDMWSAGCVMAEMFNR-KALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDY--- 269
Query: 610 IMARIKEGQFNFDAEAWSTVSSEAK----ELTKSLLTVNPAQRI 649
++ N A AW+ V A +L +L NP +RI
Sbjct: 270 ----LRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 20/30 (66%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
M ++ +H +H GVVHRDL P N+LL+
Sbjct: 139 FMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 130/326 (39%), Gaps = 71/326 (21%)
Query: 361 PNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE- 419
PNF++ K + E+ ILG GS V + + Q V + ID +
Sbjct: 7 PNFEQSLKNLVVSEK---------ILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDI 54
Query: 420 ---EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFT----- 471
EI LL HPN++ +C + Y D + K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ-DLVESKNVSDENLKLQK 113
Query: 472 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPA---------GDNIKVV--DFG 520
E ++RQ+ + V +HS ++HRDLKP+N+L S + +N++++ DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 521 FACLK--------RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK 572
C K R +L+ P T + APE+L + + Q K
Sbjct: 174 L-CKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNN-------------------LQTK 213
Query: 573 SGYDENCDLWSLGVILYTMLC-GRVPFHARSRDDSALSIMARIKEGQFNFDAEAW---ST 628
+ D++S+G + Y +L G+ PF + +S I G F+ D +
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES------NIIRGIFSLDEMKCLHDRS 267
Query: 629 VSSEAKELTKSLLTVNPAQRIRMMRV 654
+ +EA +L ++ +P +R M+V
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKV 293
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++RQ+ + V +HS ++HRDLKP+N+L+S
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 64 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 180 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 184
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ T+ Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 185 KDSQVGTVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 229
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 230 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 284
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 285 ISI--PELLAHPYVQIQ 299
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 128 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 160
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKIXDFGLARVADPDHDHTGFLTE 186
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 187 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 222
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 63 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 120
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 121 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 179 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 216
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 16/212 (7%)
Query: 369 GSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL---- 424
G+ FE DL+ LG G+Y V + +GQ AVK I ++ E+ LL
Sbjct: 42 GNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLD 101
Query: 425 ---RACQGHPNIVNLHCVFQD-EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMR 480
R + +F++ +V ++ KG+ E+ +I
Sbjct: 102 ISMRTVDCPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAV 160
Query: 481 QLVAAVHFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP--CFTLQ 537
+V A+ +HS+ V+HRD+KP N+L + A +K+ DFG + +S+
Sbjct: 161 SIVKALEHLHSKLSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDSVAKTIDAGCKP 218
Query: 538 YAAPEVLRQD--KSGYDENCDLWSLGVILVNV 567
Y APE + + + GY D+WSLG+ ++ +
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIEL 250
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Query: 921 ENEASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLS----------GISGNLI 963
E+ +I +V A+ +HS+ V+HRD+KP N+L++ GISG L+
Sbjct: 152 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 205
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%)
Query: 102 ACKFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINL 161
AC G+ FE DL+ LG G+Y V + +GQ AVK I ++ E+ L
Sbjct: 37 ACISIGNQNFEVKADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRL 96
Query: 162 L 162
L
Sbjct: 97 L 97
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 129/326 (39%), Gaps = 71/326 (21%)
Query: 361 PNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE- 419
PNF++ K + E+ ILG GS V + + Q V + ID +
Sbjct: 7 PNFEQSLKNLVVSEK---------ILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDI 54
Query: 420 ---EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFT----- 471
EI LL HPN++ +C + Y D + K
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ-DLVESKNVSDENLKLQK 113
Query: 472 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFS---------DPAGDNIKVV--DFG 520
E ++RQ+ + V +HS ++HRDLKP+N+L S +N++++ DFG
Sbjct: 114 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 173
Query: 521 FACLK--------RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK 572
C K R +L+ P T + APE+L + + Q K
Sbjct: 174 L-CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESNN-------------------LQTK 213
Query: 573 SGYDENCDLWSLGVILYTMLC-GRVPFHARSRDDSALSIMARIKEGQFNFDAEAW---ST 628
+ D++S+G + Y +L G+ PF + +S I G F+ D +
Sbjct: 214 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES------NIIRGIFSLDEMKCLHDRS 267
Query: 629 VSSEAKELTKSLLTVNPAQRIRMMRV 654
+ +EA +L ++ +P +R M+V
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKV 293
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++RQ+ + V +HS ++HRDLKP+N+L+S
Sbjct: 120 LLRQIASGVAHLHSLKIIHRDLKPQNILVS 149
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 68 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 125
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 126 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 183
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 184 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 221
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + + +K+ DFG A K + F
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QD + Y D+++ G++LY ++
Sbjct: 183 SGSILWMAPEVIRM-----------------------QDSNPYSFQSDVYAFGIVLYELM 219
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 220 TGQLPYSNINNRDQIIEMVGR 240
Score = 33.1 bits (74), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFL 153
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 174 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 17/188 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYA-VKIISRKIDCSE------EINLLRACQGHPNIVNLHC 438
+G GS+ + ++ T E A ++ RK+ SE E L+ Q HPNIV +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ-HPNIVRFYD 92
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQK-GRCGFTENEASRIM-RQLVAAVHFMHSRG--V 494
++ V ++ R + + R RQ++ + F+H+R +
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-TLQYAAPEVLRQDKSGYDE 553
+HRDLK +N+ + P G ++K+ D G A LKR S T ++ APE + YDE
Sbjct: 153 IHRDLKCDNIFITGPTG-SVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYEEK---YDE 208
Query: 554 NCDLWSLG 561
+ D+++ G
Sbjct: 209 SVDVYAFG 216
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 27/36 (75%), Gaps = 2/36 (5%)
Query: 929 RQLVAAVHFMHSRG--VVHRDLKPENLLLSGISGNL 962
RQ++ + F+H+R ++HRDLK +N+ ++G +G++
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSV 171
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A K + F
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 187 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 223
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 224 TGQLPYSNINNRDQIIFMVGR 244
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 129 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 157
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 53 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 110
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 111 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 169 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 206
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 187 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 222
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 191 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTE 186
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 187 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 222
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A K + F
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 195 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 231
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 232 TGQLPYSNINNRDQIIFMVGR 252
Score = 32.7 bits (73), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 137 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 165
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + + +K+ DFG A K + F
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLHED--NTVKIGDFGLATEKSRWSGSHQFEQL 182
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QD + Y D+++ G++LY ++
Sbjct: 183 SGSILWMAPEVIRM-----------------------QDSNPYSFQSDVYAFGIVLYELM 219
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 220 TGQLPYSNINNRDQIIEMVGR 240
Score = 32.7 bits (73), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
I RQ + ++H++ ++HRDLK N+ L N +KI
Sbjct: 125 IARQTARGMDYLHAKSIIHRDLKSNNIFLH--EDNTVKI 161
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTE 190
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 191 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/240 (25%), Positives = 98/240 (40%), Gaps = 23/240 (9%)
Query: 348 TKMIPADSPAIVPPNFDKIFKGSLFFEQYDM--DLDKAGILGDGSYSVCRRCVEKSTGQE 405
K PA + A V + K F +D+ + + +G+G+Y V + TGQ+
Sbjct: 22 VKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ 81
Query: 406 YAVKIISRKIDCS-------EEINLLRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXX 457
A+K I D E+ +L+ + H NI+ + + + V +
Sbjct: 82 VAIKKIPNAFDVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFKSVYVVLDL 140
Query: 458 XXDRIRQ--KGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIK 515
+ Q T + QL+ + +MHS V+HRDLKP NLL ++ +K
Sbjct: 141 MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENC--ELK 198
Query: 516 VVDFGFA-------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ DFG A + + T Y APE++ Y + DLWS+G I +L
Sbjct: 199 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE-YTQAIDLWSVGCIFGEML 257
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + +MHS V+HRDLKP NLL++
Sbjct: 163 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVN 192
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLN--TTXDLKICDFGLARVADPDHDHTGFLTE 206
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 207 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 242
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS-------RKIDCSEEINLLRACQGHPNIVNLHC 438
+G+GS+ G++Y +K I+ + + E+ +L A HPNIV
Sbjct: 32 IGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVL-ANMKHPNIVQYRE 90
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
F++ Y RI + F E++ Q+ A+ +H R ++HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 499 LKPENLLFSDPAGDNIKVVDFGFAC-------LKRESLHTPCFTLQYAAPEVLRQDKSGY 551
+K +N+ + +++ DFG A L R + TP Y +PE+ + Y
Sbjct: 151 IKSQNIFLTKDG--TVQLGDFGIARVLNSTVELARACIGTP----YYLSPEIC--ENKPY 202
Query: 552 DENCDLWSLGVIL 564
+ D+W+LG +L
Sbjct: 203 NNKSDIWALGCVL 215
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 910 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
RI + F E++ Q+ A+ +H R ++HRD+K +N+ L+
Sbjct: 113 RINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT 159
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 30/141 (21%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF--- 534
I RQ + ++H++ ++HRDLK N+ + +K+ DFG A K + F
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDL--TVKIGDFGLATEKSRWSGSHQFEQL 166
Query: 535 --TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
++ + APEV+R QDK+ Y D+++ G++LY ++
Sbjct: 167 SGSILWMAPEVIRM-----------------------QDKNPYSFQSDVYAFGIVLYELM 203
Query: 593 CGRVPFHARSRDDSALSIMAR 613
G++P+ + D + ++ R
Sbjct: 204 TGQLPYSNINNRDQIIFMVGR 224
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
I RQ + ++H++ ++HRDLK N+ L
Sbjct: 109 IARQTAQGMDYLHAKSIIHRDLKSNNIFL 137
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 206
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 207 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 242
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 149 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 178
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 194
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 195 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 230
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 137 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 166
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 186
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 187 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 222
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 188
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 189 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 224
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 131 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 160
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 184
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 185 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 220
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 190
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 191 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 186
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 187 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 222
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 129 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 158
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 184
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 185 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 220
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 127 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 156
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 55/105 (52%), Gaps = 9/105 (8%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
+ + + Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A +
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDH 182
Query: 530 HTPCFTLQYA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
F +Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 183 DHTGFLTEYVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ + + Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 125 LSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES------LHT 531
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + L
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLXE 190
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
T Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 191 XVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 191
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 192 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 227
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 192
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 193 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 228
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 135 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 164
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 183
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 184 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 219
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 126 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 155
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQ 537
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + F +
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLTE 190
Query: 538 YA------APEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 191 YVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 226
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 133 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 162
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES------LHT 531
+ Q++ + ++HS V+HRDLKP NLL + ++K+ DFG A + L
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLNTTC--DLKICDFGLARVADPDHDHTGFLXE 191
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
T Y APE++ K GY ++ D+WS+G IL +L
Sbjct: 192 XVATRWYRAPEIMLNSK-GYTKSIDIWSVGCILAEML 227
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ Q++ + ++HS V+HRDLKP NLLL+
Sbjct: 134 FLYQILRGLKYIHSANVLHRDLKPSNLLLN 163
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 99/240 (41%), Gaps = 23/240 (9%)
Query: 348 TKMIPADSPAIVPPNFDKIFKGSLFFEQYDM--DLDKAGILGDGSYSVCRRCVEKSTGQE 405
K PA + A V + K F +D+ + + +G+G+Y V + TGQ+
Sbjct: 23 VKAEPAHTAASVAAKNLALLKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQ 82
Query: 406 YAVKIISRKIDCS-------EEINLLRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXX 457
A+K I D E+ +L+ + H NI+ + + + V +
Sbjct: 83 VAIKKIPNAFDVVTNAKRTLRELKILKHFK-HDNIIAIKDILRPTVPYGEFKSVYVVLDL 141
Query: 458 XXDRIRQ--KGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIK 515
+ Q T + QL+ + +MHS V+HRDLKP NLL ++ +K
Sbjct: 142 MESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNE--NCELK 199
Query: 516 VVDFGFA---CLK----RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ DFG A C + + T Y APE++ Y + DLWS+G I +L
Sbjct: 200 IGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHE-YTQAIDLWSVGCIFGEML 258
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
+ QL+ + +MHS V+HRDLKP NLL++
Sbjct: 164 FLYQLLRGLKYMHSAQVIHRDLKPSNLLVN 193
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDAEXTAREGAKFP 173
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 174 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 95/221 (42%), Gaps = 21/221 (9%)
Query: 359 VPPNFDKIFKGSLFFEQYDM---DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI 415
+P + F+G++ + D+ DL+ +G GS+ R + G + AVKI+ +
Sbjct: 15 IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQD 72
Query: 416 DCSEEIN-LLRACQ-----GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKG-RC 468
+E +N LR HPNIV + + + G R
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 469 GFTENEASRIMRQLVAAVHFMHSRG--VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
E + + ++++H+R +VHRDLK NLL +KV DFG + LK
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKY--TVKVCDFGLSRLKA 190
Query: 527 ESL---HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVIL 564
T ++ APEVLR + S +E D++S GVIL
Sbjct: 191 SXFLXSKXAAGTPEWMAPEVLRDEPS--NEKSDVYSFGVIL 229
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 475 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPC 533
A + Q+ V ++HS+ ++HRDLKP N+ D +K+ DFG LK + T
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDGKRTRS 195
Query: 534 -FTLQYAAPE-VLRQDKSGYDENCDLWSLGVILVNVL 568
TL+Y +PE + QD Y + DL++LG+IL +L
Sbjct: 196 KGTLRYMSPEQISSQD---YGKEVDLYALGLILAELL 229
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%)
Query: 924 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
A + Q+ V ++HS+ ++HRDLKP N+ L
Sbjct: 138 ALELFEQITKGVDYIHSKKLIHRDLKPSNIFL 169
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 22/120 (18%)
Query: 467 RCGFTENEAS---RIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC 523
RC + E I Q+ AV F+HS+G++HRDLKP N+ F+ D +KV DFG
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT--MDDVVKVGDFGLVT 212
Query: 524 L-----KRESLHTP----------CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ +++ TP T Y +PE + + Y D++SLG+IL +L
Sbjct: 213 AMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGN--NYSHKVDIFSLGLILFELL 270
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Query: 916 RCGFTENEAS---RIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
RC + E I Q+ AV F+HS+G++HRDLKP N+ +
Sbjct: 155 RCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT 198
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCVFQDE 443
LG GS+ R +K TG + AVK + ++ EE L AC G P IV L+ ++
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE---LVACAGLSSPRIVPLYGAVREG 136
Query: 444 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
I+Q G C E+ A + Q + + ++H+R ++H D+K +N
Sbjct: 137 PWVNIFMELLEGGSLGQLIKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 194
Query: 504 LLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQY-------AAPEVLRQDKSGYDENC 555
+L S G + DFG A CL+ + L T Y APEV+ D
Sbjct: 195 VLLSSD-GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC--DAKV 251
Query: 556 DLWSLGVILVNVL 568
D+WS +++++L
Sbjct: 252 DIWSSCCMMLHML 264
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I+Q G C E+ A + Q + + ++H+R ++H D+K +N+LLS
Sbjct: 155 IKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 198
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 21/221 (9%)
Query: 359 VPPNFDKIFKGSLFFEQYDM---DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI 415
+P + F+G++ + D+ DL+ +G GS+ R + G + AVKI+ +
Sbjct: 15 IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTVHRA--EWHGSDVAVKILMEQD 72
Query: 416 DCSEEIN-LLRACQ-----GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKG-RC 468
+E +N LR HPNIV + + + G R
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGARE 132
Query: 469 GFTENEASRIMRQLVAAVHFMHSRG--VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR 526
E + + ++++H+R +VHR+LK NLL +KV DFG + LK
Sbjct: 133 QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKY--TVKVCDFGLSRLKA 190
Query: 527 ESL---HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVIL 564
+ + T ++ APEVLR + S +E D++S GVIL
Sbjct: 191 STFLSSKSAAGTPEWMAPEVLRDEPS--NEKSDVYSFGVIL 229
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 64 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 121
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 122 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 179
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 180 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 217
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 66 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 123
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 124 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 181
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 182 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 219
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 174 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 81/197 (41%), Gaps = 30/197 (15%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL---- 529
E + ++ AVH +H G+VH DLKP N L D +K++DFG A +
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGM---LKLIDFGIANQMQPDTTSVV 212
Query: 530 -HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
+ + Y PE ++ D S EN + KS D+WSLG IL
Sbjct: 213 KDSQVGAVNYMPPEAIK-DMSSSRENG--------------KSKSKISPKSDVWSLGCIL 257
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQR 648
Y M G+ PF S L + N + E + +++ K L +P QR
Sbjct: 258 YYMTYGKTPFQQIINQISKLHAII-----DPNHEIEFPDIPEKDLQDVLKCCLKRDPKQR 312
Query: 649 IRMMRVKLTFHAFHQAQ 665
I + +L H + Q Q
Sbjct: 313 ISI--PELLAHPYVQIQ 327
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 20/33 (60%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
E + ++ AVH +H G+VH DLKP N L+
Sbjct: 156 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI 188
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 60 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 117
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 118 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 176 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 115
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 116 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 174 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 211
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 67 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 124
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 125 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 183 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 220
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 59 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 116
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L SD + K+ DFG A L ++ T F
Sbjct: 117 AQIAEGMAFIEERNYIHRDLRAANILVSDTL--SCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 175 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 212
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 90/227 (39%), Gaps = 43/227 (18%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDCSE---EINLLRACQGHPNIVNLH 437
++G GSY +K+ + A+K ++R IDC EI +L + I+ LH
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKS-DYIIRLH 93
Query: 438 -CVFQDEVHTYXXXXXXXXXXXXDRIRQ-KGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
+ +++ + D + K TE I+ L+ F+H G++
Sbjct: 94 DLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGII 153
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFA-----------------------------CLKR 526
HRDLKP N L + +K+ DFG A LK+
Sbjct: 154 HRDLKPANCLLNQDCS--VKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKK 211
Query: 527 ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
+ L + T Y APE++ + Y + D+WS G I +L KS
Sbjct: 212 Q-LTSHVVTRWYRAPELILL-QENYTNSIDIWSTGCIFAELLNMMKS 256
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE I+ L+ F+H G++HRDLKP N LL+
Sbjct: 128 LTEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLN 165
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E NL++ Q H +V L+ V E Y D ++ T N+ +
Sbjct: 54 EANLMKQLQ-HQRLVRLYAVVTQE-PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMA 111
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HR+L+ N+L SD + K+ DFG A L ++ +T F
Sbjct: 112 AQIAEGMAFIEERNYIHRNLRAANILVSDTL--SCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ + Y
Sbjct: 170 IKWTAPEAI--NYGTFTIKSDVWSFGILLTEIVTHGRIPY 207
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 109/306 (35%), Gaps = 79/306 (25%)
Query: 386 LGDGSYS-VCRRCVEKSTGQEYAVKI-----ISRKIDCSEEINLLRACQGHPNIVNLHCV 439
+G+G++S V + G E + + S I + E+ L G N++ +
Sbjct: 29 IGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYC 88
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
F+ H D + + E M L A+ +H G+VHRD+
Sbjct: 89 FRKNDHVVIAMPYLEHESFLDILN-----SLSFQEVREYMLNLFKALKRIHQFGIVHRDV 143
Query: 500 KPENLLFSDPAGDNIKVVDFGFA------------------------------CLKRESL 529
KP N L++ +VDFG A CL R
Sbjct: 144 KPSNFLYNRRL-KKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQ 202
Query: 530 HTP-CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVIL 588
P T + APEVL + C + + D+WS GVI
Sbjct: 203 VAPRAGTPGFRAPEVLTK--------CPNQTTAI-----------------DMWSAGVIF 237
Query: 589 YTMLCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVN--PA 646
++L GR PF+ S D +AL+ + I+ + A AK KS+L PA
Sbjct: 238 LSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQA---------AKTFGKSILCSKEVPA 288
Query: 647 QRIRMM 652
Q +R +
Sbjct: 289 QDLRKL 294
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
E M L A+ +H G+VHRD+KP N L
Sbjct: 117 QEVREYMLNLFKALKRIHQFGIVHRDVKPSNFL 149
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCVFQDE 443
+G GS+ R +K TG + AVK + ++ EE L AC G P IV L+ ++
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE---LVACAGLSSPRIVPLYGAVREG 122
Query: 444 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
I+Q G C E+ A + Q + + ++H+R ++H D+K +N
Sbjct: 123 PWVNIFMELLEGGSLGQLIKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 180
Query: 504 LLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQY-------AAPEVLRQDKSGYDENC 555
+L S G + DFG A CL+ + L T Y APEV+ D
Sbjct: 181 VLLSSD-GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC--DAKV 237
Query: 556 DLWSLGVILVNVL 568
D+WS +++++L
Sbjct: 238 DIWSSCCMMLHML 250
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I+Q G C E+ A + Q + + ++H+R ++H D+K +N+LLS
Sbjct: 141 IKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 184
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 75/326 (23%)
Query: 361 PNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE- 419
PNF++ K + E+ ILG GS V + + Q V + ID +
Sbjct: 25 PNFEQSLKNLVVSEK---------ILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDI 72
Query: 420 ---EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFT----- 471
EI LL HPN++ +C + Y D + K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ-DLVESKNVSDENLKLQK 131
Query: 472 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFS---------DPAGDNIKVV--DFG 520
E ++RQ+ + V +HS ++HRDLKP+N+L S +N++++ DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 521 FACLK--------RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK 572
C K R +L+ P T + APE+L + K
Sbjct: 192 L-CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE-----------------------STK 227
Query: 573 SGYDENCDLWSLGVILYTMLC-GRVPFHARSRDDSALSIMARIKEGQFNFDAEAW---ST 628
+ D++S+G + Y +L G+ PF + +S I G F+ D +
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES------NIIRGIFSLDEMKCLHDRS 281
Query: 629 VSSEAKELTKSLLTVNPAQRIRMMRV 654
+ +EA +L ++ +P +R M+V
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKV 307
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++RQ+ + V +HS ++HRDLKP+N+L+S
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 127/326 (38%), Gaps = 75/326 (23%)
Query: 361 PNFDKIFKGSLFFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE- 419
PNF++ K + E+ ILG GS V + + Q V + ID +
Sbjct: 25 PNFEQSLKNLVVSEK---------ILGYGSSGTV---VFQGSFQGRPVAVKRMLIDFCDI 72
Query: 420 ---EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFT----- 471
EI LL HPN++ +C + Y D + K
Sbjct: 73 ALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQ-DLVESKNVSDENLKLQK 131
Query: 472 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFS---------DPAGDNIKVV--DFG 520
E ++RQ+ + V +HS ++HRDLKP+N+L S +N++++ DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 521 FACLK--------RESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK 572
C K R +L+ P T + APE+L + K
Sbjct: 192 L-CKKLDSGQXXFRXNLNNPSGTSGWRAPELLEE-----------------------STK 227
Query: 573 SGYDENCDLWSLGVILYTMLC-GRVPFHARSRDDSALSIMARIKEGQFNFDAEAW---ST 628
+ D++S+G + Y +L G+ PF + +S I G F+ D +
Sbjct: 228 RRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES------NIIRGIFSLDEMKCLHDRS 281
Query: 629 VSSEAKELTKSLLTVNPAQRIRMMRV 654
+ +EA +L ++ +P +R M+V
Sbjct: 282 LIAEATDLISQMIDHDPLKRPTAMKV 307
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 24/30 (80%)
Query: 927 IMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
++RQ+ + V +HS ++HRDLKP+N+L+S
Sbjct: 138 LLRQIASGVAHLHSLKIIHRDLKPQNILVS 167
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS--------RKIDCSEEINLLRACQGHPNIVNLH 437
+G GS+ + + A+K +S + D +E+ L+ + HPN +
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYR 120
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
+ E HT D + + E E + + + + ++HS ++HR
Sbjct: 121 GCYLRE-HTAWLVMEYCLGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEV-LRQDKSGYDENCD 556
D+K N+L S+P +K+ DFG A + + + T + APEV L D+ YD D
Sbjct: 179 DVKAGNILLSEPG--LVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVD 235
Query: 557 LWSLGVILVNVLRQDKSGYDENC 579
+WSLG+ + + + ++ N
Sbjct: 236 VWSLGITCIELAERKPPLFNMNA 258
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E E + + + + ++HS ++HRD+K N+LLS
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 188
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + M +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQ 192
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK---SGYDENCDLWSL 584
+ + + PE+L D YD + D+WSLG +L +++ + + G D L +
Sbjct: 193 EYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 251
Query: 585 GVILYT-MLCGRVPFHARSRDDSALSIMARIKEGQF-NF-DAEAWSTVSSEAKELTKSLL 641
+L T L G + + D I+ + ++ NF +E VS EA +L LL
Sbjct: 252 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 311
Query: 642 TVNPAQRI 649
+ QR+
Sbjct: 312 RYDHQQRL 319
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 134 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 170
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 471 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH 530
T A ++ A++F H G++HRD+KP N+L S A + +KVVDFG A +S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS--ATNAVKVVDFGIARAIADSGN 171
Query: 531 T------PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ T QY +PE R D D D++SLG +L VL
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVL 213
Score = 37.0 bits (84), Expect = 0.055, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+L+S + N +K+
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANILIS--ATNAVKV 157
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 87/193 (45%), Gaps = 18/193 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG--HPNIVNLHCVFQDE 443
+G GS+ R +K TG + AVK + ++ EE L AC G P IV L+ ++
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEE---LVACAGLSSPRIVPLYGAVREG 138
Query: 444 VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPEN 503
I+Q G C E+ A + Q + + ++H+R ++H D+K +N
Sbjct: 139 PWVNIFMELLEGGSLGQLIKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADN 196
Query: 504 LLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQY-------AAPEVLRQDKSGYDENC 555
+L S G + DFG A CL+ + L T Y APEV+ D
Sbjct: 197 VLLSSD-GSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPC--DAKV 253
Query: 556 DLWSLGVILVNVL 568
D+WS +++++L
Sbjct: 254 DIWSSCCMMLHML 266
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 911 IRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
I+Q G C E+ A + Q + + ++H+R ++H D+K +N+LLS
Sbjct: 157 IKQMG-C-LPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLS 200
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 92/188 (48%), Gaps = 10/188 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + M +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI-DHQQKKLRLIDWGLAEFYHPAQ 187
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK---SGYDENCDLWSL 584
+ + + PE+L D YD + D+WSLG +L +++ + + G D L +
Sbjct: 188 EYNVRVASRYFKGPELL-VDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRI 246
Query: 585 GVILYT-MLCGRVPFHARSRDDSALSIMARIKEGQF-NF-DAEAWSTVSSEAKELTKSLL 641
+L T L G + + D I+ + ++ NF +E VS EA +L LL
Sbjct: 247 AKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLL 306
Query: 642 TVNPAQRI 649
+ QR+
Sbjct: 307 RYDHQQRL 314
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 129 LTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMI 165
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 32/212 (15%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS--RKIDCSEEI--NLLRACQGHPNIVNLHCVFQ 441
+GDG++ C + YAVK++ +K S +I ++L+ Q N +
Sbjct: 43 MGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYH 102
Query: 442 DEVHTYXXXXXXXXX---XXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
+ Y + I + GF + +++ A++++ + H D
Sbjct: 103 GKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTD 162
Query: 499 LKPENLLFSDPAGD-----------------------NIKVVDFGFACLKRESLHTPCFT 535
LKPEN+L DP + IK++DFG A K + + T
Sbjct: 163 LKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINT 222
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
QY APEV+ G+D + D+WS G +L +
Sbjct: 223 RQYRAPEVILN--LGWDVSSDMWSFGCVLAEL 252
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
H NIV++ V +++ Y + I G + A Q++ +
Sbjct: 70 HQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSV--DTAINFTNQILDGIKHA 127
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESL---HTPCFTLQYAAPEVLR 545
H +VHRD+KP+N+L + +K+ DFG A L SL + T+QY +PE +
Sbjct: 128 HDMRIVHRDIKPQNILID--SNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAK 185
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
+ + DE D++S+G++LY ML G PF+ +
Sbjct: 186 GEAT--------------------------DECTDIYSIGIVLYEMLVGEPPFNG----E 215
Query: 606 SALSIMAR 613
+A+SI +
Sbjct: 216 TAVSIAIK 223
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 924 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKIY 966
A Q++ + H +VHRD+KP+N+L+ S +KI+
Sbjct: 113 AINFTNQILDGIKHAHDMRIVHRDIKPQNILID--SNKTLKIF 153
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++RQ T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLRQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 916 RCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
R T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 125 RQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.4 bits (137), Expect = 4e-08, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 62/143 (43%), Gaps = 34/143 (23%)
Query: 471 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH 530
T A ++ A++F H G++HRD+KP N++ S A + +KV+DFG A +S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGN 171
Query: 531 TPC------FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSL 584
+ T QY +PE R D D D++SL
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDS--------------------------VDARSDVYSL 205
Query: 585 GVILYTMLCGRVPFHARSRDDSA 607
G +LY +L G PF S D A
Sbjct: 206 GCVLYEVLTGEPPFTGDSPDSVA 228
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+++S + N +K+
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKV 157
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 94/222 (42%), Gaps = 40/222 (18%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE-EINLLRACQGHPN 432
+++ MD + ++G G + + + G+ Y +K + + +E E+ L A H N
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAEREVKAL-AKLDHVN 65
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENE------------------ 474
IV+ + + + R K +C F + E
Sbjct: 66 IVHYNGC-------WDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEK 118
Query: 475 -----ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRES 528
A + Q+ V ++HS+ +++RDLKP N+ D +K+ DFG LK +
Sbjct: 119 LDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTK--QVKIGDFGLVTSLKNDG 176
Query: 529 LHTPC-FTLQYAAPE-VLRQDKSGYDENCDLWSLGVILVNVL 568
TL+Y +PE + QD Y + DL++LG+IL +L
Sbjct: 177 KRXRSKGTLRYMSPEQISSQD---YGKEVDLYALGLILAELL 215
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/32 (37%), Positives = 21/32 (65%)
Query: 924 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
A + Q+ V ++HS+ +++RDLKP N+ L
Sbjct: 124 ALELFEQITKGVDYIHSKKLINRDLKPSNIFL 155
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 88/203 (43%), Gaps = 15/203 (7%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIIS--------RKIDCSEEINLLRACQGHPNIVNLH 437
+G GS+ + + A+K +S + D +E+ L+ + HPN +
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYR 81
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHR 497
+ E HT D + + E E + + + + ++HS ++HR
Sbjct: 82 GCYLRE-HTAWLVMEYCLGSASDLLEVHKKP-LQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 498 DLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEV-LRQDKSGYDENCD 556
D+K N+L S+P +K+ DFG A + + + T + APEV L D+ YD D
Sbjct: 140 DVKAGNILLSEPG--LVKLGDFGSASIMAPA-NXFVGTPYWMAPEVILAMDEGQYDGKVD 196
Query: 557 LWSLGVILVNVLRQDKSGYDENC 579
+WSLG+ + + + ++ N
Sbjct: 197 VWSLGITCIELAERKPPLFNMNA 219
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 921 ENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E E + + + + ++HS ++HRD+K N+LLS
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS 149
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 430 HPNIVNLHCVFQDE-VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
H N+V L V +E Y D +R +GR + + + A+ +
Sbjct: 73 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 132
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFTLQYAAPEVLRQD 547
+ VHRDL N+L S+ DN+ KV DFG + T +++ APE LR+
Sbjct: 133 LEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 189
Query: 548 KSGYDENCDLWSLGVILVNV 567
K + D+WS G++L +
Sbjct: 190 K--FSTKSDVWSFGILLWEI 207
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 430 HPNIVNLHCVFQDEVH-TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
H N+V L V +E Y D +R +GR + + + A+ +
Sbjct: 245 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 304
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFTLQYAAPEVLRQD 547
+ VHRDL N+L S+ DN+ KV DFG + T +++ APE LR+
Sbjct: 305 LEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 361
Query: 548 KSGYDENCDLWSLGVILVNV 567
K + D+WS G++L +
Sbjct: 362 K--FSTKSDVWSFGILLWEI 379
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 430 HPNIVNLHCVFQDEVH-TYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
H N+V L V +E Y D +R +GR + + + A+ +
Sbjct: 58 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 117
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFTLQYAAPEVLRQD 547
+ VHRDL N+L S+ DN+ KV DFG + T +++ APE LR+
Sbjct: 118 LEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREK 174
Query: 548 KSGYDENCDLWSLGVILVNV 567
K + D+WS G++L +
Sbjct: 175 K--FSTKSDVWSFGILLWEI 192
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 471 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH 530
T A ++ A++F H G++HRD+KP N++ S A + +KV+DFG A +S +
Sbjct: 131 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGN 188
Query: 531 TPC------FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ T QY +PE R D D D++SLG +L VL
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVL 230
Score = 36.6 bits (83), Expect = 0.074, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+++S + N +K+
Sbjct: 131 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKV 174
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 23/201 (11%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRKI--DCSEEINLLRACQG-----HPNIVNLH 437
ILG G S + ++ AVK++ + D S + R Q HP IV ++
Sbjct: 19 ILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVY 78
Query: 438 CVFQDEVHT----YXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
+ E Y D + +G T A ++ A++F H G
Sbjct: 79 ATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGP--MTPKRAIEVIADACQALNFSHQNG 136
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC------FTLQYAAPEVLRQD 547
++HRD+KP N++ S A + +KV+DFG A +S ++ T QY +PE R D
Sbjct: 137 IIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGD 194
Query: 548 KSGYDENCDLWSLGVILVNVL 568
D D++SLG +L VL
Sbjct: 195 S--VDARSDVYSLGCVLYEVL 213
Score = 36.2 bits (82), Expect = 0.085, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+++S + N +K+
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKV 157
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 89/202 (44%), Gaps = 16/202 (7%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINLL-------RACQGHP 431
DL+ LG G+Y V + +GQ AVK I ++ E+ LL R
Sbjct: 8 DLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPF 67
Query: 432 NIVNLHCVFQD-EVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMH 490
+ +F++ +V ++ KG+ E+ +I +V A+ +H
Sbjct: 68 TVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAVSIVKALEHLH 126
Query: 491 SR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL--HTPCFTLQYAAPEVLRQD 547
S+ V+HRD+KP N+L + A +K+ DFG + + + Y APE + +
Sbjct: 127 SKLSVIHRDVKPSNVLIN--ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPE 184
Query: 548 --KSGYDENCDLWSLGVILVNV 567
+ GY D+WSLG+ ++ +
Sbjct: 185 LNQKGYSVKSDIWSLGITMIEL 206
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Query: 921 ENEASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLS----------GISGNLI 963
E+ +I +V A+ +HS+ V+HRD+KP N+L++ GISG L+
Sbjct: 108 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLV 161
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 430 HPNIVNLHCVFQDE-VHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHF 488
H N+V L V +E Y D +R +GR + + + A+ +
Sbjct: 64 HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEY 123
Query: 489 MHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFTLQYAAPEVLRQD 547
+ VHRDL N+L S+ DN+ KV DFG + T +++ APE LR+
Sbjct: 124 LEGNNFVHRDLAARNVLVSE---DNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALRE- 179
Query: 548 KSGYDENCDLWSLGVILVNV 567
+ + D+WS G++L +
Sbjct: 180 -AAFSTKSDVWSFGILLWEI 198
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 96/209 (45%), Gaps = 22/209 (10%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 211
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 212 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 268
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL------KRESLHTPCFTLQYAAPEVLRQDK 548
+HRD+K +++L + +K+ DFGF +R+ L T + APE++ +
Sbjct: 269 IHRDIKSDSILLTH--DGRVKLSDFGFCAQVSKEVPRRKXL---VGTPYWMAPELI--SR 321
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGYDE 577
Y D+WSLG++++ ++ + ++E
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYFNE 350
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 373 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 415
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 244 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 281
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 56.2 bits (134), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 471 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH 530
T A ++ A++F H G++HRD+KP N++ S A + +KV+DFG A +S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGN 171
Query: 531 TPC------FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ T QY +PE R D D D++SLG +L VL
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVL 213
Score = 36.2 bits (82), Expect = 0.088, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+++S + N +K+
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKV 157
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 55.8 bits (133), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 10/104 (9%)
Query: 471 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLH 530
T A ++ A++F H G++HRD+KP N++ S A + +KV+DFG A +S +
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKVMDFGIARAIADSGN 171
Query: 531 TPC------FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ T QY +PE R D D D++SLG +L VL
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDS--VDARSDVYSLGCVLYEVL 213
Score = 36.2 bits (82), Expect = 0.093, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Query: 920 TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
T A ++ A++F H G++HRD+KP N+++S + N +K+
Sbjct: 114 TPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS--ATNAVKV 157
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 71/163 (43%), Gaps = 16/163 (9%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK--GRCGFTENEASR 477
E+ LLR HPN++ C +D Y + + QK G E
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQ-EYVEQKDFAHLGL---EPIT 122
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDP-AGDNIKVVDFGFACLKRESLHTPCF-- 534
+++Q + + +HS +VHRDLKP N+L S P A IK + F K+ ++ F
Sbjct: 123 LLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSR 182
Query: 535 ------TLQYAAPEVLRQD-KSGYDENCDLWSLGVILVNVLRQ 570
T + APE+L +D K D++S G + V+ +
Sbjct: 183 RSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 23/34 (67%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E +++Q + + +HS +VHRDLKP N+L+S
Sbjct: 119 EPITLLQQTTSGLAHLHSLNIVHRDLKPHNILIS 152
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N+L D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVLI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+L+
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLI 164
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 76 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 134
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 135 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 191
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYAAPEVLRQDKSGY 551
+HRD+K +++L + +K+ DFGF A + +E T + APE++ + Y
Sbjct: 192 IHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI--SRLPY 247
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 248 GPEVDIWSLGIMVIEMVDGEPPYFNE 273
Score = 33.5 bits (75), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 296 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 338
Score = 31.6 bits (70), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 167 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 204
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 31 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 89
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 90 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 146
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYAAPEVLRQDKSGY 551
+HRD+K +++L + +K+ DFGF A + +E T + APE++ + Y
Sbjct: 147 IHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI--SRLPY 202
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 203 GPEVDIWSLGIMVIEMVDGEPPYFNE 228
Score = 33.5 bits (75), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 251 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 293
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 122 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 159
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 33 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 91
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 92 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 148
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYAAPEVLRQDKSGY 551
+HRD+K +++L + +K+ DFGF A + +E T + APE++ + Y
Sbjct: 149 IHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI--SRLPY 204
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 205 GPEVDIWSLGIMVIEMVDGEPPYFNE 230
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 253 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 295
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 124 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 161
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLH 530
N S + QL AV F+HS G+ HRD+KP+NLL + + +K+ DFG A + E
Sbjct: 141 NLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS-KDNTLKLCDFGSAKKLIPSEPSV 199
Query: 531 TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVIL 564
+ Y APE++ + Y + DLWS+G +
Sbjct: 200 AXICSRFYRAPELML-GATEYTPSIDLWSIGCVF 232
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
N S + QL AV F+HS G+ HRD+KP+NLL++
Sbjct: 141 NLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVN 175
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 22 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 80
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 81 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 137
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYAAPEVLRQDKSGY 551
+HRD+K +++L + +K+ DFGF A + +E T + APE++ + Y
Sbjct: 138 IHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI--SRLPY 193
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 194 GPEVDIWSLGIMVIEMVDGEPPYFNE 219
Score = 33.5 bits (75), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 242 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 284
Score = 32.0 bits (71), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 113 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 150
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 98/223 (43%), Gaps = 17/223 (7%)
Query: 359 VPPNFDKIFKGSL-FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDC 417
+P + F+G+ FE DL+ LG G+Y V + +GQ AVK I ++
Sbjct: 14 IPTTENLYFQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNS 73
Query: 418 SEEINLL-------RACQGHPNIVNLHCVFQD-EVHTYXXXXXXXXXXXXDRIRQKGRCG 469
E+ LL R + +F++ +V ++ KG+
Sbjct: 74 QEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT- 132
Query: 470 FTENEASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRES 528
E+ +I +V A+ +HS+ V+HRD+KP N+L + A +K DFG + +
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN--ALGQVKXCDFGISGYLVDD 190
Query: 529 L--HTPCFTLQYAAPEVLRQD--KSGYDENCDLWSLGVILVNV 567
+ Y APE + + + GY D+WSLG+ + +
Sbjct: 191 VAKDIDAGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIEL 233
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 11/54 (20%)
Query: 921 ENEASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLS----------GISGNLI 963
E+ +I +V A+ +HS+ V+HRD+KP N+L++ GISG L+
Sbjct: 135 EDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYLV 188
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
Query: 95 PNTSNLIACKFKGSL-FFEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKI 153
P T NL F+G+ FE DL+ LG G+Y V + +GQ AVK I +
Sbjct: 15 PTTENLY---FQGAXENFEVKADDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATV 71
Query: 154 DCSEEINLL 162
+ E+ LL
Sbjct: 72 NSQEQKRLL 80
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 96/206 (46%), Gaps = 16/206 (7%)
Query: 380 LDKAGILGDGSYSVCRRCVEKSTGQEYAVKII-----SRKIDCSEEINLLRACQGHPNIV 434
LD +G+GS + +S+G+ AVK + R+ E+ ++R Q H N+V
Sbjct: 26 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQ-HENVV 84
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
++ + + D + E + + + ++ A+ +H++GV
Sbjct: 85 EMYNSYLVGDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGV 141
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGF-ACLKRESLHTPCF--TLQYAAPEVLRQDKSGY 551
+HRD+K +++L + +K+ DFGF A + +E T + APE++ + Y
Sbjct: 142 IHRDIKSDSILLTHDG--RVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELI--SRLPY 197
Query: 552 DENCDLWSLGVILVNVLRQDKSGYDE 577
D+WSLG++++ ++ + ++E
Sbjct: 198 GPEVDIWSLGIMVIEMVDGEPPYFNE 223
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 28/56 (50%), Gaps = 13/56 (23%)
Query: 277 LSPDVADFISRLLVKDPRRRLGGGELDAEELKRHPFFNVIDWDDLATKRIPAPFVP 332
+SP + F+ RLLV+DP +R A EL +HPF LA PA VP
Sbjct: 246 VSPSLKGFLDRLLVRDPAQR-----ATAAELLKHPF--------LAKAGPPASIVP 288
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 26/38 (68%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E + + + ++ A+ +H++GV+HRD+K +++LL+
Sbjct: 117 MNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT 154
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 90 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 145
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 146 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 204
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 205 PELL-VDYQMYDYSLDMWSLGCMLASMI 231
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 133 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 169
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 139
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 199 PELL-VDYQMYDYSLDMWSLGCMLASMI 225
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 84 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 139
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 140 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 198
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 199 PELL-VDYQMYDYSLDMWSLGCMLASMI 225
Score = 34.3 bits (77), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 127 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 163
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 83 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 138
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 139 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 197
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 198 PELL-VDYQMYDYSLDMWSLGCMLASMI 224
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 126 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 162
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 72/148 (48%), Gaps = 9/148 (6%)
Query: 424 LRACQGHPNIVNLHCVFQDEV-HTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQL 482
L +G PNI+ L + +D V T ++ Q T+ + M ++
Sbjct: 85 LENLRGGPNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQT----LTDYDIRFYMYEI 140
Query: 483 VAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--ESLHTPCFTLQYAA 540
+ A+ + HS G++HRD+KP N++ D ++++D+G A + + + +
Sbjct: 141 LKALDYCHSMGIMHRDVKPHNVMI-DHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYFKG 199
Query: 541 PEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE+L D YD + D+WSLG +L +++
Sbjct: 200 PELL-VDYQMYDYSLDMWSLGCMLASMI 226
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 25/37 (67%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + M +++ A+ + HS G++HRD+KP N+++
Sbjct: 128 LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMI 164
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 85/201 (42%), Gaps = 16/201 (7%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE------EINLLRACQGHPN 432
DL+ G +G G+ + + TG AVK + R + E +++++ P
Sbjct: 26 DLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPY 85
Query: 433 IVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
IV F + + R +G E ++ +V A++++ +
Sbjct: 86 IVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGP--IPERILGKMTVAIVKALYYLKEK 143
Query: 493 -GVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRESLHTPCFTLQYAAPEVL---RQ 546
GV+HRD+KP N+L + IK+ DFG + + ++ Y APE +
Sbjct: 144 HGVIHRDVKPSNILLDERG--QIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDP 201
Query: 547 DKSGYDENCDLWSLGVILVNV 567
K YD D+WSLG+ LV +
Sbjct: 202 TKPDYDIRADVWSLGISLVEL 222
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 37/66 (56%), Gaps = 11/66 (16%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLS----------G 957
++++++ + E ++ +V A++++ + GV+HRD+KP N+LL G
Sbjct: 111 EKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFG 170
Query: 958 ISGNLI 963
ISG L+
Sbjct: 171 ISGRLV 176
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/304 (21%), Positives = 115/304 (37%), Gaps = 59/304 (19%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRAC 427
E D D +K LG G+ V + K +G A K+I +I + E+ +L C
Sbjct: 21 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 80
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
P IV + F + +++ GR E ++ ++ +
Sbjct: 81 NS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 137
Query: 488 FMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVLR 545
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 138 YLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 192
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
R + Y D+WS+G+ L M GR P + S
Sbjct: 193 -----------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM 229
Query: 606 SALSIM--------ARIKEGQFNFDAEAWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLT 657
+ ++ ++ G F S E ++ L NPA+R + +L
Sbjct: 230 AIFELLDYIVNEPPPKLPSGVF----------SLEFQDFVNKCLIKNPAERADLK--QLM 277
Query: 658 FHAF 661
HAF
Sbjct: 278 VHAF 281
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 400 KSTGQEYAVKIISRKIDCSEEINLLRA------CQGHPNIVNLHCVFQDEVHTYXXXXXX 453
K TG+ V+ I+ + +E + L+ HPNIV F + +
Sbjct: 33 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 92
Query: 454 XXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFS------ 507
D I G E + I++ ++ A+ ++H G VHR +K ++L S
Sbjct: 93 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY 152
Query: 508 -DPAGDNIKVVDFGFACLKRESLHT-PCFT---LQYAAPEVLRQDKSGYDENCDLWSLGV 562
N+ ++ G ++ +H P ++ L + +PEVL+Q+ GYD D++S+G+
Sbjct: 153 LSGLRSNLSMISHG---QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 209
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL--------LSGISGNLIKI 965
G E + I++ ++ A+ ++H G VHR +K ++L LSG+ NL I
Sbjct: 108 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 163
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE------EINLLRACQGHPNIVNLHCV 439
+G+GS+ V Q+ A+K R+ D + LL C G PN+ +
Sbjct: 18 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV---YYF 74
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
Q+ +H D + GR F+ + +Q++A V +H + +V+RD+
Sbjct: 75 GQEGLHN-VLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 132
Query: 500 KPENLLFSDPAGDN---IKVVDFGFACLKRESL---HTP 532
KP+N L P N I VVDFG R+ + H P
Sbjct: 133 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP 171
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 917 CG--FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
CG F+ + +Q++A V +H + +V+RD+KP+N L+
Sbjct: 99 CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIG 140
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 79/180 (43%), Gaps = 20/180 (11%)
Query: 400 KSTGQEYAVKIISRKIDCSEEINLLRA------CQGHPNIVNLHCVFQDEVHTYXXXXXX 453
K TG+ V+ I+ + +E + L+ HPNIV F + +
Sbjct: 49 KPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108
Query: 454 XXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFS------ 507
D I G E + I++ ++ A+ ++H G VHR +K ++L S
Sbjct: 109 AYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVY 168
Query: 508 -DPAGDNIKVVDFGFACLKRESLHT-PCFT---LQYAAPEVLRQDKSGYDENCDLWSLGV 562
N+ ++ G ++ +H P ++ L + +PEVL+Q+ GYD D++S+G+
Sbjct: 169 LSGLRSNLSMISHG---QRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGI 225
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 918 GFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL--------LSGISGNLIKI 965
G E + I++ ++ A+ ++H G VHR +K ++L LSG+ NL I
Sbjct: 124 GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 179
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 17/159 (10%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE------EINLLRACQGHPNIVNLHCV 439
+G+GS+ V Q+ A+K R+ D + LL C G PN+ +
Sbjct: 17 IGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNV---YYF 73
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
Q+ +H D + GR F+ + +Q++A V +H + +V+RD+
Sbjct: 74 GQEGLHN-VLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSIHEKSLVYRDI 131
Query: 500 KPENLLFSDPAGDN---IKVVDFGFACLKRESL---HTP 532
KP+N L P N I VVDFG R+ + H P
Sbjct: 132 KPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIP 170
Score = 33.9 bits (76), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Query: 917 CG--FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
CG F+ + +Q++A V +H + +V+RD+KP+N L+
Sbjct: 98 CGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIG 139
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 475 ASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLF----SDPAGDNIKVVDFGFACLKRESL 529
+I +QL+ + +MH R G++H D+KPEN+L S IK+ D G AC E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 530 HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQD 571
T +Y +PEVL G D+WS ++ ++ D
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGC--GADIWSTACLIFELITGD 232
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 924 ASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLSGISG--NLIKI 965
+I +QL+ + +MH R G++H D+KPEN+L+ + NLI+I
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 177
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 91/236 (38%), Gaps = 45/236 (19%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKIISRK----IDCSE---EINLLRACQGHPNIVN-L 436
++G GSY +K + A+K I R IDC EI +L H ++V L
Sbjct: 60 LIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRL-NHDHVVKVL 118
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQ-KGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V +V + D + + TE ++ L+ V ++HS G++
Sbjct: 119 DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGIL 178
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFA-------------------------------CL 524
HRDLKP N L + ++KV DFG A L
Sbjct: 179 HRDLKPANCLVNQDC--SVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 525 KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCD 580
KR+ L T Y APE++ + Y E D+WS+G I +L K + D
Sbjct: 237 KRQ-LTGHVVTRWYRAPELILL-QENYTEAIDVWSIGCIFAELLNMIKENVAYHAD 290
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
TE ++ L+ V ++HS G++HRDLKP N L++
Sbjct: 153 LTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVN 190
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 94/245 (38%), Gaps = 55/245 (22%)
Query: 385 ILGDGSYSVCRRCVEKSTGQEYAVKI--------ISRKIDCSEEINLLRACQGHPNIVNL 436
I+G G + R G E AVK IS+ I+ + L A HPNI+ L
Sbjct: 14 IIGIGGFGKVYRAF--WIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC--GFTENEASRIMRQLVAAVHFMHSRGV 494
V E + +R+ R N A +I R ++++H +
Sbjct: 72 RGVCLKEPN-LCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIAR----GMNYLHDEAI 126
Query: 495 V---HRDLKPENLLF------SDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQYAAPEVL 544
V HRDLK N+L D + +K+ DFG A R + + + APEV+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
R S + + D+WS GV+L+ +L G VPF R D
Sbjct: 187 RA--------------------------SMFSKGSDVWSYGVLLWELLTGEVPF--RGID 218
Query: 605 DSALS 609
A++
Sbjct: 219 GLAVA 223
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 7/102 (6%)
Query: 475 ASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLF----SDPAGDNIKVVDFGFACLKRESL 529
+I +QL+ + +MH R G++H D+KPEN+L S IK+ D G AC E
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY 192
Query: 530 HTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQD 571
T +Y +PEVL G D+WS ++ ++ D
Sbjct: 193 TNSIQTREYRSPEVLLGAPWGC--GADIWSTACLIFELITGD 232
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%), Gaps = 3/45 (6%)
Query: 924 ASRIMRQLVAAVHFMHSR-GVVHRDLKPENLLLSGISG--NLIKI 965
+I +QL+ + +MH R G++H D+KPEN+L+ + NLI+I
Sbjct: 133 VKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQI 177
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/301 (21%), Positives = 113/301 (37%), Gaps = 45/301 (14%)
Query: 373 FEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRA 426
E D D +K LG G+ V + K +G A K+I +I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
C P IV + F + +++ GR E ++ ++ +
Sbjct: 61 CNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 487 HFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVL 544
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-- 173
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRD 604
R + Y D+WS+G+ L M GR P
Sbjct: 174 ------------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAK 209
Query: 605 DSALSIMARIKEGQFNFDAE----AWSTVSSEAKELTKSLLTVNPAQRIRMMRVKLTFHA 660
+ + MA + + + S E ++ L NPA+R + +L HA
Sbjct: 210 EDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLK--QLMVHA 267
Query: 661 F 661
F
Sbjct: 268 F 268
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 84/196 (42%), Gaps = 30/196 (15%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL----- 524
E A M QL+ + ++HS V+HRDLKP N LF + +K+ DFG A +
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPAN-LFINTEDLVLKIGDFGLARIMDPHY 175
Query: 525 -KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWS 583
+ L T Y +P +L + Y + D+W+ G I +L K+ + +L
Sbjct: 176 SHKGHLSEGLVTKWYRSPRLLLS-PNNYTKAIDMWAAGCIFAEML-TGKTLFAGAHELEQ 233
Query: 584 LGVILYTM----------LCGRVPFHARSRDDSALSIMARIKEGQFNFDAEAWSTVSSEA 633
+ +IL ++ L +P + R+ + ++ G +S EA
Sbjct: 234 MQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPG-----------ISREA 282
Query: 634 KELTKSLLTVNPAQRI 649
+ + +LT +P R+
Sbjct: 283 VDFLEQILTFSPMDRL 298
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
E A M QL+ + ++HS V+HRDLKP NL ++
Sbjct: 117 LLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFIN 154
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 181
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 182 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 221
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 181
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 182 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 221
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 123 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 159
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 201
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 202 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 241
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 143 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 179
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 182
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 183 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 222
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 124 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 160
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 58/223 (26%), Positives = 88/223 (39%), Gaps = 25/223 (11%)
Query: 370 SLFFEQYD------MDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSEEINL 423
+L+F+ D D+ LG G Y V K AVK + K D E
Sbjct: 18 NLYFQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTL--KEDTMEVEEF 75
Query: 424 LRACQ-----GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
L+ HPN+V L V E Y D +R+ R T +
Sbjct: 76 LKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYM 135
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC--- 533
Q+ +A+ ++ + +HRDL N L G+N +KV DFG + L +T
Sbjct: 136 ATQISSAMEYLEKKNFIHRDLAARNCL----VGENHVVKVADFGLSRLMTGDTYTAHAGA 191
Query: 534 -FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
F +++ APE L + + D+W+ GV+L + S Y
Sbjct: 192 KFPIKWTAPESLAYNT--FSIKSDVWAFGVLLWEIATYGMSPY 232
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 35/206 (16%)
Query: 387 GDGSYSVCRRCVEKSTGQEYAVKII-------SRKIDCSEEINLLRACQGHPNIVNLHCV 439
G G++ + EKSTG A+K + +R++ +++ +L HPNIV L
Sbjct: 32 GQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLH----HPNIVQLQSY 87
Query: 440 F-----QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEA------SRIMRQLVAAVHF 488
F +D Y D + + R + A + QL+ ++
Sbjct: 88 FYTLGERDRRDIYLNVVMEYVP---DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGC 144
Query: 489 MH--SRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTL----QYAAPE 542
+H S V HRD+KP N+L ++ G +K+ DFG A K+ S P Y APE
Sbjct: 145 LHLPSVNVCHRDIKPHNVLVNEADG-TLKLCDFGSA--KKLSPSEPNVAYICSRYYRAPE 201
Query: 543 VLRQDKSGYDENCDLWSLGVILVNVL 568
++ ++ Y D+WS+G I ++
Sbjct: 202 LIFGNQH-YTTAVDIWSVGCIFAEMM 226
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKR--E 527
T+ + + +L+ A+ + HS+G++HRD+KP N++ D ++++D+G A +
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI-DHELRKLRLIDWGLAEFYHPGK 180
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ + + PE+L D YD + D+WSLG + ++
Sbjct: 181 EYNVRVASRYFKGPELL-VDLQDYDYSLDMWSLGCMFAGMI 220
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 26/37 (70%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLL 955
T+ + + +L+ A+ + HS+G++HRD+KP N+++
Sbjct: 122 LTDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMI 158
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 80/201 (39%), Gaps = 19/201 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQ-EYAVKIISRKIDCSEEINLLRACQ-----GHPNIVNLHCV 439
LG G + V + + K GQ + AVK+I K E + Q HP +V + V
Sbjct: 16 LGSGQFGVVK--LGKWKGQYDVAVKMI--KEGSMSEDEFFQEAQTMMKLSHPKLVKFYGV 71
Query: 440 FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDL 499
E Y + +R G+ G ++ + + + F+ S +HRDL
Sbjct: 72 CSKEYPIYIVTEYISNGCLLNYLRSHGK-GLEPSQLLEMCYDVCEGMAFLESHQFIHRDL 130
Query: 500 KPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKSGYDENC 555
N L +KV DFG + + F ++++APEV K Y
Sbjct: 131 AARNCLVDRDL--CVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK--YSSKS 186
Query: 556 DLWSLGVILVNVLRQDKSGYD 576
D+W+ G+++ V K YD
Sbjct: 187 DVWAFGILMWEVFSLGKMPYD 207
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 91/213 (42%), Gaps = 30/213 (14%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCSE-----EINLLRACQGHPNI 433
DL +LG G + + + TG+ +K + R + ++ E+ ++R C HPN+
Sbjct: 11 DLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR-CLEHPNV 69
Query: 434 VN-LHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSR 492
+ + +++D+ + I + + ++ + + + + ++HS
Sbjct: 70 LKFIGVLYKDKRLNFITEYIKGGTLRG--IIKSMDSQYPWSQRVSFAKDIASGMAYLHSM 127
Query: 493 GVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----------------KRESLHTPCFT 535
++HRDL N L + N+ V DFG A L R+ +T
Sbjct: 128 NIIHRDLNSHNCLVRE--NKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGN 185
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ APE++ + YDE D++S G++L ++
Sbjct: 186 PYWMAPEMI--NGRSYDEKVDVFSFGIVLCEII 216
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 65/136 (47%), Gaps = 32/136 (23%)
Query: 473 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVV--DFGF--------A 522
N+ +I +++V + ++H++G++H+DLK +N+ + DN KVV DFG A
Sbjct: 130 NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFY-----DNGKVVITDFGLFSISGVLQA 184
Query: 523 CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLW 582
+ + L L + APE++RQ +E DK + ++ D++
Sbjct: 185 GRREDKLRIQNGWLCHLAPEIIRQLSPDTEE-----------------DKLPFSKHSDVF 227
Query: 583 SLGVILYTMLCGRVPF 598
+LG I Y + PF
Sbjct: 228 ALGTIWYELHAREWPF 243
Score = 33.9 bits (76), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 25/33 (75%)
Query: 922 NEASRIMRQLVAAVHFMHSRGVVHRDLKPENLL 954
N+ +I +++V + ++H++G++H+DLK +N+
Sbjct: 130 NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVF 162
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 91/233 (39%), Gaps = 39/233 (16%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRAC 427
E D D +K LG G+ V + K +G A K+I +I + E+ +L C
Sbjct: 64 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 123
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
P IV + F + +++ GR E ++ ++ +
Sbjct: 124 NS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 180
Query: 488 FMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVLR 545
++ + ++HRD+KP N+L + + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 181 YLREKHKIMHRDVKPSNILVN--SRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 235
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 236 -----------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/161 (22%), Positives = 69/161 (42%), Gaps = 9/161 (5%)
Query: 419 EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
EE NL++ Q H +V L+ V E Y D ++ +
Sbjct: 57 EEANLMKTLQ-HDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDF 115
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCF 534
Q+ + ++ + +HRDL+ N+L S+ K+ DFG A + ++ +T F
Sbjct: 116 SAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKIADFGLARVIEDNEYTAREGAKF 173
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L ++ K Y
Sbjct: 174 PIKWTAPEAI--NFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 36/198 (18%)
Query: 419 EEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRI 478
EE NL++ Q H +V L+ V E Y D ++ +
Sbjct: 56 EEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDF 114
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCF 534
Q+ + ++ + +HRDL+ N+L S+ K+ DFG A + ++ +T F
Sbjct: 115 SAQIAEGMAYIERKNYIHRDLRAANVLVSESL--MCKIADFGLARVIEDNEYTAREGAKF 172
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLC- 593
+++ APE + + G + ++WS G++LY ++
Sbjct: 173 PIKWTAPEAI--------------NFGCFTI------------KSNVWSFGILLYEIVTY 206
Query: 594 GRVPFHARSRDD--SALS 609
G++P+ R+ D SALS
Sbjct: 207 GKIPYPGRTNADVMSALS 224
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E N+++ Q H +V LH V E Y D ++ +
Sbjct: 60 EANVMKTLQ-HDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 117
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L S A K+ DFG A + ++ +T F
Sbjct: 118 AQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKIADFGLARVIEDNEYTAREGAKFP 175
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L+ ++ + Y
Sbjct: 176 IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPY 213
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 90/233 (38%), Gaps = 39/233 (16%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRAC 427
E D D +K LG G+ V + K +G A K+I +I + E+ +L C
Sbjct: 29 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 88
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
P IV + F + +++ GR E ++ ++ +
Sbjct: 89 NS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 145
Query: 488 FMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVLR 545
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 146 YLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE--- 200
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 201 -----------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 10/160 (6%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E N+++ Q H +V LH V E Y D ++ +
Sbjct: 233 EANVMKTLQ-HDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 290
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFT 535
Q+ + F+ R +HRDL+ N+L S A K+ DFG A + ++ +T F
Sbjct: 291 AQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + + D+WS G++L+ ++ + Y
Sbjct: 349 IKWTAPEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPY 386
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 373 FEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRA 426
E D D +K LG G+ V + K +G A K+I +I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
C P IV + F + +++ GR E ++ ++ +
Sbjct: 61 CNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 487 HFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVL 544
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-- 173
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 174 ------------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 373 FEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRA 426
E D D +K LG G+ V + K +G A K+I +I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
C P IV + F + +++ GR E ++ ++ +
Sbjct: 61 CNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 487 HFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVL 544
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-- 173
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 174 ------------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG A + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 88/232 (37%), Gaps = 39/232 (16%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRAC 427
E D D +K LG G+ V + K +G A K+I +I + E+ +L C
Sbjct: 5 ELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHEC 64
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
P IV + F + +++ GR E ++ ++ +
Sbjct: 65 NS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLT 121
Query: 488 FMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHTPCFTLQYAAPEVLR 545
++ + ++HRD+KP N+L + IK+ DFG + L E + T Y +PE
Sbjct: 122 YLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDEMANEFVGTRSYMSPE--- 176
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVP 597
R + Y D+WS+G+ L M GR P
Sbjct: 177 -----------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 64/154 (41%), Gaps = 13/154 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPN+++L V +RQ FT + ++R + A + ++
Sbjct: 93 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYL 151
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT--------LQYAAP 541
VHRDL N+L + + KV DFG + + P +T +++ AP
Sbjct: 152 ADMNYVHRDLAARNILVN--SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 209
Query: 542 EVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
E ++ K + D+WS G+++ V+ + Y
Sbjct: 210 EAIQYRK--FTSASDVWSYGIVMWEVMSYGERPY 241
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 373 FEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRA 426
E D D +K LG G+ V + K +G A K+I +I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
C P IV + F + +++ GR E ++ ++ +
Sbjct: 61 CNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 487 HFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVL 544
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-- 173
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 174 ------------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 90/234 (38%), Gaps = 39/234 (16%)
Query: 373 FEQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRA 426
E D D +K LG G+ V + K +G A K+I +I + E+ +L
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHE 60
Query: 427 CQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAV 486
C P IV + F + +++ GR E ++ ++ +
Sbjct: 61 CNS-PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGL 117
Query: 487 HFMHSR-GVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQYAAPEVL 544
++ + ++HRD+KP N+L + IK+ DFG + +S+ ++ T Y +PE
Sbjct: 118 TYLREKHKIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRSYMSPE-- 173
Query: 545 RQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPF 598
R + Y D+WS+G+ L M GR P
Sbjct: 174 ------------------------RLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 119
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 120 EEASVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+ Y D+WS GV++ V + K Y+
Sbjct: 176 FSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 23/198 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS---------EEINLLRACQGHPNIVNL 436
+G+G + V + +T AVK ++ +D + +EI ++ CQ H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVEL 95
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
D DR+ G + + +I + ++F+H +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAAPEVLRQDKSG 550
HRD+K N+L + K+ DFG A + T T Y APE LR + +
Sbjct: 156 HRDIKSANILLDEAF--TAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRGEIT- 212
Query: 551 YDENCDLWSLGVILVNVL 568
D++S GV+L+ ++
Sbjct: 213 --PKSDIYSFGVVLLEII 228
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 23/198 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS---------EEINLLRACQGHPNIVNL 436
+G+G + V + +T AVK ++ +D + +EI ++ CQ H N+V L
Sbjct: 39 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVEL 95
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
D DR+ G + + +I + ++F+H +
Sbjct: 96 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 155
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAAPEVLRQDKSG 550
HRD+K N+L + K+ DFG A + T T Y APE LR + +
Sbjct: 156 HRDIKSANILLDEAF--TAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRGEIT- 212
Query: 551 YDENCDLWSLGVILVNVL 568
D++S GV+L+ ++
Sbjct: 213 --PKSDIYSFGVVLLEII 228
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 90/207 (43%), Gaps = 23/207 (11%)
Query: 385 ILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSEEINLLRACQG-------HPNIVNL 436
++G G + VC ++ ++ AV I + K+ +E+ C+ HPN+V+L
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHL 109
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
V D +K FT + ++R + A + ++ G VH
Sbjct: 110 EGVVT-RGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVH 168
Query: 497 RDLKPENLLFSDPAGDNI--KVVDFGFACLKR---ESLHTPC---FTLQYAAPEVLRQDK 548
RDL N+L + N+ KV DFG + + E+++T +++ APE ++ K
Sbjct: 169 RDLAARNILVN----SNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRK 224
Query: 549 SGYDENCDLWSLGVILVNVLRQDKSGY 575
+ D+WS G+++ V+ + Y
Sbjct: 225 --FTSASDVWSYGIVMWEVMSYGERPY 249
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGAVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLI 963
D +K FT + ++R + + + ++ G VHRDL N+L I+ NL+
Sbjct: 134 DSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNIL---INSNLV 185
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 62 HPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 120
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 121 EEACVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 176
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
S Y D+WS GV++ V + K Y+
Sbjct: 177 F--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 207
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 66/156 (42%), Gaps = 12/156 (7%)
Query: 420 EINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIM 479
E N+++ Q H +V LH V E Y D ++ +
Sbjct: 227 EANVMKTLQ-HDKLVKLHAVVTKE-PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS 284
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYA 539
Q+ + F+ R +HRDL+ N+L S A K+ DFG A + + F +++
Sbjct: 285 AQIAEGMAFIEQRNYIHRDLRAANILVS--ASLVCKIADFGLARVGAK------FPIKWT 336
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
APE + + + D+WS G++L+ ++ + Y
Sbjct: 337 APEAI--NFGSFTIKSDVWSFGILLMEIVTYGRIPY 370
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGFVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLSE--NNVVKICDFGLA---RDIYKNPDYVRKGDT 261
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + DK Y D+WS GV+L + S Y
Sbjct: 262 RLPLKWMAPESIF-DKI-YSTKSDVWSYGVLLWEIFSLGGSPY 302
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 207 QVARGMEFLSSRKCIHRDLAARNILLS--ENNVVKI 240
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 64 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 122
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 123 EEACVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 178
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+ Y D+WS GV++ V + K Y+
Sbjct: 179 FSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYE 209
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 59 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 117
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 118 EEACVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 173
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
S Y D+WS GV++ V + K Y+
Sbjct: 174 F--SFSRYSSKSDVWSFGVLMWEVFSEGKIPYE 204
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 474 EASRIM---RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL------ 524
+ASR++ Q+ + ++ SR VHRDL N+L A ++K+ DFG A L
Sbjct: 112 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKD 169
Query: 525 ---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L + + D+WS GV+L +
Sbjct: 170 YYVVREPGQSPIF---WYAPESLSDNI--FSRQSDVWSFGVVLYELF 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 61 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 119
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 120 EEACVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 175
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+ Y D+WS GV++ V + K Y+
Sbjct: 176 FSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYE 206
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 64/153 (41%), Gaps = 13/153 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HP +V L+ V ++ D +R + R F + + + ++
Sbjct: 81 HPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYL 139
Query: 490 HSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFACLKRESLHTPC----FTLQYAAPEV 543
V+HRDL N L G+N IKV DFG + +T F +++A+PEV
Sbjct: 140 EEACVIHRDLAARNCL----VGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEV 195
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+ Y D+WS GV++ V + K Y+
Sbjct: 196 FSFSR--YSSKSDVWSFGVLMWEVFSEGKIPYE 226
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 87/204 (42%), Gaps = 29/204 (14%)
Query: 385 ILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGHPNIVN 435
++G G + VCR ++ +E V I + K +E E +++ + HPNI+
Sbjct: 21 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIR 79
Query: 436 LHCVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L V + + +R G+ FT + ++R + + + ++
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAEMSY 137
Query: 495 VHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT--------LQYAAPEVL 544
VHRDL N+L + N+ KV DFG + E+ P +T +++ APE +
Sbjct: 138 VHRDLAARNILVN----SNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K + D WS G+++ V+
Sbjct: 194 AFRK--FTSASDAWSYGIVMWEVM 215
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 34 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 91
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 92 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 149
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 150 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 205
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 206 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 241
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 17 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 74
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 75 D-HPNIIRLEGVVTKS-KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 133 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 189 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 224
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 474 EASRIM---RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL------ 524
+ASR++ Q+ + ++ SR VHRDL N+L A ++K+ DFG A L
Sbjct: 125 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKD 182
Query: 525 ---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L + + D+WS GV+L +
Sbjct: 183 YYVVREPGQSPIF---WYAPESLSDNI--FSRQSDVWSFGVVLYELF 224
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 474 EASRIM---RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL------ 524
+ASR++ Q+ + ++ SR VHRDL N+L A ++K+ DFG A L
Sbjct: 113 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKD 170
Query: 525 ---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L + + D+WS GV+L +
Sbjct: 171 YYVVREPGQSPIF---WYAPESLSDNI--FSRQSDVWSFGVVLYELF 212
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 17 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 74
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 75 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 132
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 133 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 188
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 189 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 224
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEXMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 92/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 46 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 103
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 104 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 161
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + T +++
Sbjct: 162 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIRWT 217
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 218 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 253
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 52/107 (48%), Gaps = 19/107 (17%)
Query: 474 EASRIM---RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL------ 524
+ASR++ Q+ + ++ SR VHRDL N+L A ++K+ DFG A L
Sbjct: 109 DASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEA--HVKIADFGLAKLLPLDKD 166
Query: 525 ---KRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L + + D+WS GV+L +
Sbjct: 167 XXVVREPGQSPIF---WYAPESLSDNI--FSRQSDVWSFGVVLYELF 208
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 93/218 (42%), Gaps = 27/218 (12%)
Query: 377 DMDLDKAGILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRAC 427
++ +DK ++G G + VC ++ + +E +V I + K+ +E E +++
Sbjct: 44 NISIDK--VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQF 101
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
HPNI+ L V D +K FT + ++R + + +
Sbjct: 102 D-HPNIIRLEGVVTKS-KPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMK 159
Query: 488 FMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYA 539
++ G VHRDL N+L + N+ KV DFG + + + T +++
Sbjct: 160 YLSDMGYVHRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWT 215
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
+PE + K + D+WS G++L V+ + Y E
Sbjct: 216 SPEAIAYRK--FTSASDVWSYGIVLWEVMSYGERPYWE 251
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 477 RIMRQLVAAVHFMHSRG--VVHRDLKPENLLFS---DPAGDNIKVVDFGFACLKRESLHT 531
R+M + + +M ++ +VHRDL+ N+ + A KV DFG + S+
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSG 185
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
Q+ APE + ++ Y E D +S +IL +L
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG-----FACLKRESLHTP 532
++ Q+ A + ++ S VVH+DL N+L D N+K+ D G +A + L
Sbjct: 133 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL--NVKISDLGLFREVYAADYYKLLGNS 190
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ APE + K D D+WS GV+L V
Sbjct: 191 LLPIRWMAPEAIMYGKFSIDS--DIWSYGVVLWEVF 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 478 IMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFG-----FACLKRESLHTP 532
++ Q+ A + ++ S VVH+DL N+L D N+K+ D G +A + L
Sbjct: 150 LVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKL--NVKISDLGLFREVYAADYYKLLGNS 207
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ APE + K D D+WS GV+L V
Sbjct: 208 LLPIRWMAPEAIMYGKFSIDS--DIWSYGVVLWEVF 241
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 89/233 (38%), Gaps = 53/233 (22%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-----EYAVKIISRKIDCSE------EINLLRAC 427
+L+ +LG G++ + + AVK++ K D SE E+ ++
Sbjct: 46 NLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQL 105
Query: 428 QGHPNIVNL---------------HCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTE 472
H NIVNL +C + D ++ D I + + E
Sbjct: 106 GSHENIVNLLGACTLSGPIYLIFEYCCYGDLLN---YLRSKREKFSEDEIEYENQKRLEE 162
Query: 473 NEASRIM---------RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA- 522
E ++ Q+ + F+ + VHRDL N+L + G +K+ DFG A
Sbjct: 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH--GKVVKICDFGLAR 220
Query: 523 -------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+ R + P +++ APE L + Y D+WS G++L +
Sbjct: 221 DIMSDSNYVVRGNARLP---VKWMAPESLFEGI--YTIKSDVWSYGILLWEIF 268
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 55/241 (22%)
Query: 374 EQYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS------EEINLLRAC 427
E D D ++ LG G+ V + + +G A K+I +I + E+ +L C
Sbjct: 12 ELKDDDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHEC 71
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVH 487
P IV + F Y D G EA RI +++ V
Sbjct: 72 NS-PYIVGFYGAF------YSDGEISICMEHMD----GGSLDQVLKEAKRIPEEILGKVS 120
Query: 488 FMHSRG---------VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL-HTPCFTLQ 537
RG ++HRD+KP N+L + IK+ DFG + +S+ ++ T
Sbjct: 121 IAVLRGLAYLREKHQIMHRDVKPSNILVNSRG--EIKLCDFGVSGQLIDSMANSFVGTRS 178
Query: 538 YAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVP 597
Y APE R + Y D+WS+G+ L + GR P
Sbjct: 179 YMAPE--------------------------RLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 598 F 598
Sbjct: 213 I 213
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNIVNLHCVF 440
LG G + V + K GQ + A+K+I + + EE ++ H +V L+ V
Sbjct: 32 LGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVC 88
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ + + +R+ R F + + + + A+ ++ S+ +HRDL
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 501 PENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKSGYDENCD 556
N L +D +KV DFG + + +T F ++++ PEVL K + D
Sbjct: 148 ARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 203
Query: 557 LWSLGVILVNVLRQDKSGYD 576
+W+ GV++ + K Y+
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 23/198 (11%)
Query: 386 LGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS---------EEINLLRACQGHPNIVNL 436
+G+G + V + +T AVK ++ +D + +EI ++ CQ H N+V L
Sbjct: 33 MGEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQ-HENLVEL 89
Query: 437 HCVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
D DR+ G + + +I + ++F+H +
Sbjct: 90 LGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHI 149
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYAAPEVLRQDKSG 550
HRD+K N+L + K+ DFG A + T Y APE LR + +
Sbjct: 150 HRDIKSANILLDEAF--TAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEIT- 206
Query: 551 YDENCDLWSLGVILVNVL 568
D++S GV+L+ ++
Sbjct: 207 --PKSDIYSFGVVLLEII 222
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 253
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 254 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 294
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 199 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 232
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 201
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 202 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 180
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 260
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 261 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 301
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 206 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 239
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 201
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 202 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 180
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 262
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 263 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 303
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 208 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 255
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 256 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 296
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 201 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 234
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEK--NVVKIXDFGLA---RDIYKDPDYVRKGDA 206
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 207 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS--EKNVVKI 185
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 53/91 (58%), Gaps = 7/91 (7%)
Query: 474 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC 533
EA + +++ A+ ++HS G+V+ DLKPEN++ ++ + +K++D G A + S
Sbjct: 183 EAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTE---EQLKLIDLG-AVSRINSFGYLY 238
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVIL 564
T + APE++R +G D++++G L
Sbjct: 239 GTPGFQAPEIVR---TGPTVATDIYTVGRTL 266
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 26/34 (76%)
Query: 923 EASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
EA + +++ A+ ++HS G+V+ DLKPEN++L+
Sbjct: 183 EAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT 216
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 351 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 406
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 407 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 464
Query: 575 Y 575
Y
Sbjct: 465 Y 465
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 247
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 248 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 288
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 193 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 226
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 477 RIMRQLVAAVHFMHSRG--VVHRDLKPENLLFS---DPAGDNIKVVDFGFACLKRESLHT 531
R+M + + +M ++ +VHRDL+ N+ + A KV DFG + S+
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSG 185
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
Q+ APE + ++ Y E D +S +IL +L
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 63/154 (40%), Gaps = 13/154 (8%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPN+++L V +RQ FT + ++R + A + ++
Sbjct: 67 HPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQND-GQFTVIQLVGMLRGIAAGMKYL 125
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT--------LQYAAP 541
VHR L N+L + + KV DFG + + P +T +++ AP
Sbjct: 126 ADMNYVHRALAARNILVN--SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAP 183
Query: 542 EVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
E ++ K + D+WS G+++ V+ + Y
Sbjct: 184 EAIQYRK--FTSASDVWSYGIVMWEVMSYGERPY 215
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 212
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 213 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 253
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 158 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 191
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 210
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 211 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 189
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A R+ P +
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLSEK--NVVKICDFGLA---RDIYKDPDYVRKGDA 206
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 207 RLPLKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 247
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 152 QVAKGMEFLASRKXIHRDLAARNILLS--EKNVVKI 185
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNI 433
DL LG G + V + K GQ + A+K+I + + EE ++ H +
Sbjct: 9 DLTFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKL 65
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V L+ V + + + +R+ R F + + + + A+ ++ S+
Sbjct: 66 VQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKS 549
+HRDL N L +D +KV DFG + + +T F ++++ PEVL K
Sbjct: 125 FLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK- 181
Query: 550 GYDENCDLWSLGVILVNVLRQDKSGYD 576
+ D+W+ GV++ + K Y+
Sbjct: 182 -FSSKSDIWAFGVLMWEIYSLGKMPYE 207
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNI 433
DL LG G + V + K GQ + A+K+I + + EE ++ H +
Sbjct: 10 DLTFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKL 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V L+ V + + + +R+ R F + + + + A+ ++ S+
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKS 549
+HRDL N L +D +KV DFG + + +T F ++++ PEVL K
Sbjct: 126 FLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSK- 182
Query: 550 GYDENCDLWSLGVILVNVLRQDKSGYD 576
+ D+W+ GV++ + K Y+
Sbjct: 183 -FSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 87/210 (41%), Gaps = 25/210 (11%)
Query: 385 ILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGHPNIVN 435
++G G + VC ++ +E V I + K+ +E E +++ HPNI++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFD-HPNIIH 87
Query: 436 LHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
L V D +K FT + ++R + A + ++ G V
Sbjct: 88 LEGVVTKS-KPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 496 HRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT------LQYAAPEVLRQD 547
HRDL N+L + N+ KV DFG + + + T +++ APE +
Sbjct: 147 HRDLAARNILIN----SNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFR 202
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
K + D+WS G+++ V+ + Y E
Sbjct: 203 K--FTSASDVWSYGIVMWEVVSYGERPYWE 230
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNI 433
DL LG G + V + K GQ + A+K+I + + EE ++ H +
Sbjct: 5 DLTFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKL 61
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V L+ V + + + +R+ R F + + + + A+ ++ S+
Sbjct: 62 VQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKS 549
+HRDL N L +D +KV DFG + + +T F ++++ PEVL K
Sbjct: 121 FLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK- 177
Query: 550 GYDENCDLWSLGVILVNVLRQDKSGYD 576
+ D+W+ GV++ + K Y+
Sbjct: 178 -FSSKSDIWAFGVLMWEIYSLGKMPYE 203
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 87/200 (43%), Gaps = 17/200 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNIVNLHCVF 440
LG G + V + K GQ + A+K+I + + EE ++ H +V L+ V
Sbjct: 23 LGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVC 79
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ + + +R+ R F + + + + A+ ++ S+ +HRDL
Sbjct: 80 TKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 501 PENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKSGYDENCD 556
N L +D +KV DFG + + +T F ++++ PEVL K + D
Sbjct: 139 ARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK--FSSKSD 194
Query: 557 LWSLGVILVNVLRQDKSGYD 576
+W+ GV++ + K Y+
Sbjct: 195 IWAFGVLMWEIYSLGKMPYE 214
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 17/207 (8%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNI 433
DL LG G + V + K GQ + A+K+I + + EE ++ H +
Sbjct: 10 DLTFLKELGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNL-SHEKL 66
Query: 434 VNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRG 493
V L+ V + + + +R+ R F + + + + A+ ++ S+
Sbjct: 67 VQLYGVCTKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 494 VVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKS 549
+HRDL N L +D +KV DFG + + +T F ++++ PEVL K
Sbjct: 126 FLHRDLAARNCLVNDQG--VVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSK- 182
Query: 550 GYDENCDLWSLGVILVNVLRQDKSGYD 576
+ D+W+ GV++ + K Y+
Sbjct: 183 -FSSKSDIWAFGVLMWEIYSLGKMPYE 208
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 323
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 381
Query: 575 Y 575
Y
Sbjct: 382 Y 382
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 323
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 381
Query: 575 Y 575
Y
Sbjct: 382 Y 382
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 386 LGDGSYSVCRRCVEKSTGQ-EYAVKIISR----KIDCSEEINLLRACQGHPNIVNLHCVF 440
LG G + V + K GQ + A+K+I + + EE ++ H +V L+ V
Sbjct: 32 LGTGQFGVVK--YGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLS-HEKLVQLYGVC 88
Query: 441 QDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLK 500
+ + + +R+ R F + + + + A+ ++ S+ +HRDL
Sbjct: 89 TKQRPIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 501 PENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTLQYAAPEVLRQDKSGYDENCD 556
N L +D +KV DFG + + T F ++++ PEVL K + D
Sbjct: 148 ARNCLVNDQG--VVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSK--FSSKSD 203
Query: 557 LWSLGVILVNVLRQDKSGYD 576
+W+ GV++ + K Y+
Sbjct: 204 IWAFGVLMWEIYSLGKMPYE 223
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 268 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 323
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 324 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 381
Query: 575 Y 575
Y
Sbjct: 382 Y 382
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 154
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 155 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 212
Query: 575 Y 575
Y
Sbjct: 213 Y 213
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 95 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 150
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ +T F +++ APE + + D+WS G++L + + +
Sbjct: 151 FGLARLIEDNEYTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 208
Query: 575 Y 575
Y
Sbjct: 209 Y 209
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 205 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 180
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLP 204
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 205 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 242
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 147 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 180
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 113 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 168
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 169 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 207
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 86/204 (42%), Gaps = 29/204 (14%)
Query: 385 ILGDGSYS-VCRRCVEKSTGQEYAVKIISRKIDCSE--------EINLLRACQGHPNIVN 435
++G G + VCR ++ +E V I + K +E E +++ + HPNI+
Sbjct: 23 VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFE-HPNIIR 81
Query: 436 LHCVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L V + + +R G+ FT + ++R + + + ++
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ--FTVIQLVGMLRGIASGMRYLAEMSY 139
Query: 495 VHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCFT--------LQYAAPEVL 544
VHRDL N+L + N+ KV DFG + E+ P T +++ APE +
Sbjct: 140 VHRDLAARNILVN----SNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 545 RQDKSGYDENCDLWSLGVILVNVL 568
K + D WS G+++ V+
Sbjct: 196 AFRK--FTSASDAWSYGIVMWEVM 217
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 52/101 (51%), Gaps = 15/101 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFS-DPAGDNIKVVDFGFACLKRES---LHTP---- 532
Q++ V F+HS+ +HRD+KP+N L + + ++DFG A R++ H P
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN 170
Query: 533 ---CFTLQYAAPEV-LRQDKSGYDENCDLWSLGVILVNVLR 569
T +YA+ L ++S D DL SLG +L+ LR
Sbjct: 171 KNLTGTARYASVNTHLGIEQSRRD---DLESLGYVLMYFLR 208
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLS 956
Q++ V F+HS+ +HRD+KP+N L+
Sbjct: 111 QMINRVEFVHSKSFLHRDIKPDNFLMG 137
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 111 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 166
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 167 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 205
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 214 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 189
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 30/203 (14%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 84
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 85 RLYGVVLTPP-MKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQ--------YAAPEVLR 545
+HRDL NLL + D +K+ DFG L + H + +Q + APE L+
Sbjct: 143 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLK 197
Query: 546 QDKSGYDENCDLWSLGVILVNVL 568
+ D W GV L +
Sbjct: 198 TRT--FSHASDTWMFGVTLWEMF 218
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 109 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 162
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 78/200 (39%), Gaps = 24/200 (12%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 84
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 85 RLYGVVLTPP-MKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 142
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPC-----FTLQYAAPEVLRQDK 548
+HRDL NLL + D +K+ DFG L + H + APE L+
Sbjct: 143 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK--T 198
Query: 549 SGYDENCDLWSLGVILVNVL 568
+ D W GV L +
Sbjct: 199 RTFSHASDTWMFGVTLWEMF 218
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 109 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 162
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 214 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 156 QVAKGMEFLASRKXIHRDLAARNILLS--EKNVVKI 189
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 214 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 189
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 30/199 (15%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 79 RLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQ--------YAAPEVLR 545
+HRDL NLL + D +K+ DFG L + H + +Q + APE L+
Sbjct: 137 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLK 191
Query: 546 QDKSGYDENCDLWSLGVIL 564
+ D W GV L
Sbjct: 192 --TRTFSHASDTWMFGVTL 208
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 103 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 156
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
Q+ + F+ SR +HRDL N+L S+ + +K+ DFG A +++ P
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLSEK--NVVKICDFGLARDIYKDPDXVRKGDARLP 213
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
L++ APE + Y D+WS GV+L + S Y
Sbjct: 214 ---LKWMAPETIFD--RVYTIQSDVWSFGVLLWEIFSLGASPY 251
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 2/36 (5%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
Q+ + F+ SR +HRDL N+LLS N++KI
Sbjct: 156 QVAKGMEFLASRKCIHRDLAARNILLS--EKNVVKI 189
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 45/97 (46%), Gaps = 5/97 (5%)
Query: 477 RIMRQLVAAVHFMHSRG--VVHRDLKPENLLFS---DPAGDNIKVVDFGFACLKRESLHT 531
R+M + + +M ++ +VHRDL+ N+ + A KV DF + S+
Sbjct: 126 RLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSG 185
Query: 532 PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
Q+ APE + ++ Y E D +S +IL +L
Sbjct: 186 LLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTIL 222
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 30/199 (15%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 74
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 75 RLYGVVLTPP-MKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQ--------YAAPEVLR 545
+HRDL NLL + D +K+ DFG L + H + +Q + APE L+
Sbjct: 133 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLK 187
Query: 546 QDKSGYDENCDLWSLGVIL 564
+ D W GV L
Sbjct: 188 --TRTFSHASDTWMFGVTL 204
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 99 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 23/197 (11%)
Query: 387 GDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS---------EEINLLRACQGHPNIVNLH 437
G+G + V + +T AVK ++ +D + +EI + CQ H N+V L
Sbjct: 31 GEGGFGVVYKGYVNNT--TVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQ-HENLVELL 87
Query: 438 CVFQDEVHTYXXXXXXXXXXXXDRIR-QKGRCGFTENEASRIMRQLVAAVHFMHSRGVVH 496
D DR+ G + + +I + ++F+H +H
Sbjct: 88 GFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIH 147
Query: 497 RDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTP-----CFTLQYAAPEVLRQDKSGY 551
RD+K N+L + K+ DFG A + T Y APE LR + +
Sbjct: 148 RDIKSANILLDEAF--TAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRGEIT-- 203
Query: 552 DENCDLWSLGVILVNVL 568
D++S GV+L+ ++
Sbjct: 204 -PKSDIYSFGVVLLEII 219
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 77/196 (39%), Gaps = 24/196 (12%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 74
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 75 RLYGVVLTPP-MKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPC-----FTLQYAAPEVLRQDK 548
+HRDL NLL + D +K+ DFG L + H + APE L+
Sbjct: 133 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK--T 188
Query: 549 SGYDENCDLWSLGVIL 564
+ D W GV L
Sbjct: 189 RTFSHASDTWMFGVTL 204
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 99 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 13/91 (14%)
Query: 485 AVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHTPCF-----TLQ 537
+H++H+R ++HRD+K N+L +N K+ DFG + E T TL
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLD----ENFVPKITDFGISKKGTELGQTHLXXVVKGTLG 206
Query: 538 YAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
Y PE + + E D++S GV+L VL
Sbjct: 207 YIDPEYFIKGR--LTEKSDVYSFGVVLFEVL 235
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 934 AVHFMHSRGVVHRDLKPENLLL 955
+H++H+R ++HRD+K N+LL
Sbjct: 151 GLHYLHTRAIIHRDVKSINILL 172
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT----PCFTL 536
Q+ A + ++ +HRDL+ N+L + G K+ DFG A L ++ T F +
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVGN--GLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
++ APE + + D+WS G++L ++ + + Y
Sbjct: 171 KWTAPEAALYGR--FTIKSDVWSFGILLTELVTKGRVPY 207
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 30/203 (14%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 78
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 79 RLYGVVLTPP-MKMVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 136
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQ--------YAAPEVLR 545
+HRDL NLL + D +K+ DFG L + H + +Q + APE L+
Sbjct: 137 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLK 191
Query: 546 QDKSGYDENCDLWSLGVILVNVL 568
+ D W GV L +
Sbjct: 192 --TRTFSHASDTWMFGVTLWEMF 212
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 103 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 156
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-EEINLLRACQGHP-- 431
+Y + + +G G + +CV++ G YA+K + + S +E N LR H
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 432 ----NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG--FTENEASRIMRQLVAA 485
++V + ++ H D I + R F E E ++ Q+
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 486 VHFMHSRGVVHRDLKPENLLFS 507
+ ++HS +VH D+KP N+ S
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFIS 147
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
F E E ++ Q+ + ++HS +VH D+KP N+ +S S
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS 150
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-EEINLLRACQGHP-- 431
+Y + + +G G + +CV++ G YA+K + + S +E N LR H
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 432 ----NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG--FTENEASRIMRQLVAA 485
++V + ++ H D I + R F E E ++ Q+
Sbjct: 64 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 123
Query: 486 VHFMHSRGVVHRDLKPENLLFS 507
+ ++HS +VH D+KP N+ S
Sbjct: 124 LRYIHSMSLVHMDIKPSNIFIS 145
Score = 33.5 bits (75), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
F E E ++ Q+ + ++HS +VH D+KP N+ +S S
Sbjct: 108 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-EEINLLRACQGHP-- 431
+Y + + +G G + +CV++ G YA+K + + S +E N LR H
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 432 ----NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG--FTENEASRIMRQLVAA 485
++V + ++ H D I + R F E E ++ Q+
Sbjct: 66 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 125
Query: 486 VHFMHSRGVVHRDLKPENLLFS 507
+ ++HS +VH D+KP N+ S
Sbjct: 126 LRYIHSMSLVHMDIKPSNIFIS 147
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
F E E ++ Q+ + ++HS +VH D+KP N+ +S S
Sbjct: 110 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS 150
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 9/142 (6%)
Query: 375 QYDMDLDKAGILGDGSYSVCRRCVEKSTGQEYAVKIISRKIDCS-EEINLLRACQGHP-- 431
+Y + + +G G + +CV++ G YA+K + + S +E N LR H
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 432 ----NIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG--FTENEASRIMRQLVAA 485
++V + ++ H D I + R F E E ++ Q+
Sbjct: 68 GQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRG 127
Query: 486 VHFMHSRGVVHRDLKPENLLFS 507
+ ++HS +VH D+KP N+ S
Sbjct: 128 LRYIHSMSLVHMDIKPSNIFIS 149
Score = 33.5 bits (75), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGIS 959
F E E ++ Q+ + ++HS +VH D+KP N+ +S S
Sbjct: 112 FKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTS 152
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 80/199 (40%), Gaps = 30/199 (15%)
Query: 386 LGDGSYSVCRRC-VEKSTGQEYAVKIISRKIDCSE----------EINLLRACQGHPNIV 434
LGDGS+ V RR + +G+ +V + K D E+N + + H N++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLD-HRNLI 74
Query: 435 NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
L+ V DR+R K + F SR Q+ + ++ S+
Sbjct: 75 RLYGVVLTPPMK-MVTELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRF 132
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHTPCFTLQ--------YAAPEVLR 545
+HRDL NLL + D +K+ DFG L + H + +Q + APE L+
Sbjct: 133 IHRDLAARNLLLA--TRDLVKIGDFGLMRALPQNDDH---YVMQEHRKVPFAWCAPESLK 187
Query: 546 QDKSGYDENCDLWSLGVIL 564
+ D W GV L
Sbjct: 188 --TRTFSHASDTWMFGVTL 204
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 909 DRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGNLIKI 965
DR+R K + F SR Q+ + ++ S+ +HRDL NLLL+ + +L+KI
Sbjct: 99 DRLR-KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA--TRDLVKI 152
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 99 FLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 154
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ T F +++ APE + + D+WS G++L + + +
Sbjct: 155 FGLARLIEDNEWTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 212
Query: 575 Y 575
Y
Sbjct: 213 Y 213
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG L ++ +T F
Sbjct: 289 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLGRLIEDNEYTARQGAKF 344
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 345 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 383
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL N+L G+N+ KV DFG A L ++ +T F
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANIL----VGENLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 21/121 (17%)
Query: 470 FTENEASRIMR---------QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVD 518
F + E + +R Q+ + + ++ VHRDL+ N+L G+N+ KV D
Sbjct: 92 FLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVAD 147
Query: 519 FGFACLKRESLHT----PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSG 574
FG A L ++ T F +++ APE + + D+WS G++L + + +
Sbjct: 148 FGLARLIEDNEXTARQGAKFPIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVP 205
Query: 575 Y 575
Y
Sbjct: 206 Y 206
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 485 AVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF-----TLQYA 539
+H++H+R ++HRD+K N+L + K+ DFG + E T TL Y
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVP--KITDFGISKKGTELDQTHLXXVVKGTLGYI 208
Query: 540 APEVLRQDKSGYDENCDLWSLGVILVNVL 568
PE + + E D++S GV+L VL
Sbjct: 209 DPEYFIKGR--LTEKSDVYSFGVVLFEVL 235
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 18/22 (81%)
Query: 934 AVHFMHSRGVVHRDLKPENLLL 955
+H++H+R ++HRD+K N+LL
Sbjct: 151 GLHYLHTRAIIHRDVKSINILL 172
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 49/101 (48%), Gaps = 22/101 (21%)
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA---------CLKRE 527
+Q+ + ++H++ +HRDL N+L DN +K+ DFG A RE
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLL-----DNDRLVKIGDFGLAKAVPEGHEXYRVRE 195
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+P F + APE L++ K Y D+WS GV L +L
Sbjct: 196 DGDSPVF---WYAPECLKEYKFYY--ASDVWSFGVTLYELL 231
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 46/189 (24%)
Query: 478 IMRQLVAAVHFMHS-RGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTL 536
I++ ++ + ++H+ + + HRD+KP N+L D G +K+ DFG ES
Sbjct: 156 IIKSVLNSFSYIHNEKNICHRDVKPSNILM-DKNG-RVKLSDFG------ES-------- 199
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD-ENCDLWSLGVILYTMLCGR 595
+Y + ++ + Y+ + ++S Y+ D+WSLG+ LY M
Sbjct: 200 EYMVDKKIKGSRGTYE----------FMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNV 249
Query: 596 VPFHARSRDDSALSIM--ARIKEGQFNFDAEAW-------------STVSSEAKELTKSL 640
VPF + S + + R K ++ D + + +S+E + K
Sbjct: 250 VPFSLKI---SLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLF 306
Query: 641 LTVNPAQRI 649
L NPA+RI
Sbjct: 307 LRKNPAERI 315
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA 522
F+ I QL++ + ++HS+ +++RD+KPEN L P I ++DFG A
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
F+ I QL++ + ++HS+ +++RD+KPEN L+ G GN
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI-GRPGN 143
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRESLHT----PCF 534
Q+ + + ++ VHRDL+ N+L G+N+ KV DFG A L ++ T F
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANIL----VGENLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + + D+WS G++L + + + Y
Sbjct: 178 PIKWTAPEAALYGR--FTIKSDVWSFGILLTELTTKGRVPY 216
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 91/225 (40%), Gaps = 45/225 (20%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYS----VCRRCVEKSTGQEYAVKIISRKIDCS------- 418
++F ++Y L K LG+G + C TG+ AVK + K DC
Sbjct: 9 TVFHKRY---LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGW 63
Query: 419 -EEINLLRACQGHPNIVNLH--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEA 475
+EI++LR H +I+ C Q E D + R +
Sbjct: 64 KQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQL 119
Query: 476 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA---------C 523
+Q+ + ++HS+ +HR+L N+L DN +K+ DFG A
Sbjct: 120 LLFAQQICEGMAYLHSQHYIHRNLAARNVLL-----DNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 524 LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L++ K Y D+WS GV L +L
Sbjct: 175 RVREDGDSPVF---WYAPECLKEYKFYYAS--DVWSFGVTLYELL 214
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 470 FTENEASRIMR--QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRE 527
F+ + AS I+ QL A+ ++ S+ VHRD+ N+L S A D +K+ DFG + +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS--ATDCVKLGDFGLSRYMED 543
Query: 528 SLHTPC----FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
S + +++ APE + + + D+W GV + +L
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 586
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 470 FTENEASRIMR--QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRE 527
F+ + AS I+ QL A+ ++ S+ VHRD+ N+L S A D +K+ DFG + +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS--ATDCVKLGDFGLSRYMED 163
Query: 528 SLHTPC----FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
S + +++ APE + + + D+W GV + +L
Sbjct: 164 STYYKASKGKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 211
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 212 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 151 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 204
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 205 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 246
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 150 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 203
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 204 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 245
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 147 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 200
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 201 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 242
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 211
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 212 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 199 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 252
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 253 GRLPVKWMAPEALFDRI--YTHQSDVWSFGVLLWEIFTLGGSPY 294
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 143 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 196
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 197 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 238
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPCFT---- 535
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H +
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDYYKKTTN 211
Query: 536 ----LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 212 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA 522
FT I QL+ + ++H++ +++RD+KPEN L P I ++DFG A
Sbjct: 97 FTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLS 956
FT I QL+ + ++H++ +++RD+KPEN L+
Sbjct: 97 FTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVG 134
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFS-DPAGDNIKVVDFGFACLKRES 528
Q+++ + ++HS+ +HRD+KP+N L G+ + ++DFG A R++
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLS-GISGNLIKI 965
Q+++ + ++HS+ +HRD+KP+N L+ G GNL+ I
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 149
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVDFGFAC---- 523
T+++ I +Q+ A + ++ S+ VHRDL N L G+N +K+ DFG +
Sbjct: 125 LTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCL----VGENLLVKIGDFGMSRDVYS 180
Query: 524 --LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
R HT +++ PE + K + D+WSLGV+L + K +
Sbjct: 181 TDYYRVGGHT-MLPIRWMPPESIMYRK--FTTESDVWSLGVVLWEIFTYGKQPW 231
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL----KRESLHTPCFT- 535
Q+ ++++ G+VHR+L N+L P+ ++V DFG A L ++ L++ T
Sbjct: 141 QIAKGMYYLEEHGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPDDKQLLYSEAKTP 198
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ A E + K Y D+WS GV + ++
Sbjct: 199 IKWMALESIHFGK--YTHQSDVWSYGVTVWELM 229
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFS-DPAGDNIKVVDFGFACLKRES 528
Q+++ + ++HS+ +HRD+KP+N L G+ + ++DFG A R++
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLS-GISGNLIKI 965
Q+++ + ++HS+ +HRD+KP+N L+ G GNL+ I
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 149
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFS-DPAGDNIKVVDFGFACLKRES 528
Q+++ + ++HS+ +HRD+KP+N L G+ + ++DFG A R++
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 159
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 930 QLVAAVHFMHSRGVVHRDLKPENLLLS-GISGNLIKI 965
Q+++ + ++HS+ +HRD+KP+N L+ G GNL+ I
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYI 147
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 44/229 (19%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTG----------QEYAVKIISRKIDCSEEINLLRACQ 428
D+ ++G+G++ + K G +EYA K R D + E+ +L
Sbjct: 16 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLG 73
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC-------GFTENEASRIMRQ 481
HPNI+NL + + Y D +R K R + AS + Q
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQ 132
Query: 482 --------LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFA-----CLKR 526
+ + ++ + +HRDL N+L G+N K+ DFG + +K+
Sbjct: 133 QLLHFAADVARGMDYLSQKQFIHRDLAARNIL----VGENYVAKIADFGLSRGQEVYVKK 188
Query: 527 ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
P +++ A E L + S Y N D+WS GV+L ++ + Y
Sbjct: 189 TMGRLP---VRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 232
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/229 (23%), Positives = 92/229 (40%), Gaps = 44/229 (19%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTG----------QEYAVKIISRKIDCSEEINLLRACQ 428
D+ ++G+G++ + K G +EYA K R D + E+ +L
Sbjct: 26 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLG 83
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC-------GFTENEASRIMRQ 481
HPNI+NL + + Y D +R K R + AS + Q
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQ 142
Query: 482 --------LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFA-----CLKR 526
+ + ++ + +HRDL N+L G+N K+ DFG + +K+
Sbjct: 143 QLLHFAADVARGMDYLSQKQFIHRDLAARNIL----VGENYVAKIADFGLSRGQEVYVKK 198
Query: 527 ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
P +++ A E L + S Y N D+WS GV+L ++ + Y
Sbjct: 199 TMGRLP---VRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 242
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 28/218 (12%)
Query: 377 DMDLDKAGILGDGSYSVCRRCVEKSTGQEY----AVKIISRKIDCSEEIN-----LLRAC 427
+ +L + +LG G++ + + G+ A+KI++ + L+ A
Sbjct: 37 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS 96
Query: 428 QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMR----QLV 483
HP++V L V K +N S+++ Q+
Sbjct: 97 MDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHK------DNIGSQLLLNWCVQIA 150
Query: 484 AAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFTLQY 538
+ ++ R +VHRDL N+L P +++K+ DFG A L K + +++
Sbjct: 151 KGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLARLLEGDEKEYNADGGKMPIKW 208
Query: 539 AAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
A E + K + D+WS GV + ++ YD
Sbjct: 209 MALECIHYRK--FTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 91/225 (40%), Gaps = 45/225 (20%)
Query: 370 SLFFEQYDMDLDKAGILGDGSYS----VCRRCVEKSTGQEYAVKIISRKIDCS------- 418
++F ++Y L K LG+G + C TG+ AVK + K DC
Sbjct: 9 TVFHKRY---LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKAL--KADCGPQHRSGW 63
Query: 419 -EEINLLRACQGHPNIVNLH--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEA 475
+EI++LR H +I+ C Q E D + R +
Sbjct: 64 KQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLP---RHSIGLAQL 119
Query: 476 SRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA---------C 523
+Q+ + ++H++ +HR+L N+L DN +K+ DFG A
Sbjct: 120 LLFAQQICEGMAYLHAQHYIHRNLAARNVLL-----DNDRLVKIGDFGLAKAVPEGHEYY 174
Query: 524 LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
RE +P F + APE L++ K Y D+WS GV L +L
Sbjct: 175 RVREDGDSPVF---WYAPECLKEYKFYYAS--DVWSFGVTLYELL 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL----KRESLHTPCFT- 535
Q+ ++++ G+VHR+L N+L P+ ++V DFG A L ++ L++ T
Sbjct: 123 QIAKGMYYLEEHGMVHRNLAARNVLLKSPS--QVQVADFGVADLLPPDDKQLLYSEAKTP 180
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ A E + K Y D+WS GV + ++
Sbjct: 181 IKWMALESIHFGK--YTHQSDVWSYGVTVWELM 211
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.7 bits (99), Expect = 0.001, Method: Composition-based stats.
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 475 ASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL----KRESLH 530
A I+RQ+ +A+ H+ G HRD+KPEN+L S A D +VDFG A K L
Sbjct: 136 AVAIVRQIGSALDAAHAAGATHRDVKPENILVS--ADDFAYLVDFGIASATTDEKLTQLG 193
Query: 531 TPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
TL Y APE + + Y D+++L +L L
Sbjct: 194 NTVGTLYYXAPERFSESHATY--RADIYALTCVLYECL 229
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 41/253 (16%)
Query: 386 LGDGSYS---VCRRCVE-KSTGQEYAVKIISRK------IDCSEEINLLRACQGHPNIVN 435
LG+G + +CR E +TG++ AVK + + D +EI +LR H NIV
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVK 87
Query: 436 LHCV-FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ +D + K + + + Q+ + ++ SR
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 147
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA---------CLKRESLHTPCFTLQYAAPEVLR 545
VHRDL N+L + +K+ DFG ++ +P F + APE L
Sbjct: 148 VHRDLAARNVLVE--SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF---WYAPECLM 202
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
Q K + D+WS GV L +L CD S + L+ + G P H +
Sbjct: 203 QSK--FYIASDVWSFGVTLHELLTY--------CDSDSSPMALFLKMIG--PTHGQM--- 247
Query: 606 SALSIMARIKEGQ 618
+ ++ +KEG+
Sbjct: 248 TVTRLVNTLKEGK 260
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 53/105 (50%), Gaps = 10/105 (9%)
Query: 470 FTENEASRIMR--QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRE 527
F+ + AS I+ QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +
Sbjct: 486 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMED 543
Query: 528 SLHTPC----FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
S + +++ APE + + + D+W GV + +L
Sbjct: 544 STYYKASKGKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 586
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ + ++ R +VHRDL N+L P +++K+ DFG A L K +
Sbjct: 125 QIAKGMMYLEERRLVHRDLAARNVLVKSP--NHVKITDFGLARLLEGDEKEYNADGGKMP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + K + D+WS GV + ++ YD
Sbjct: 183 IKWMALECIHYRK--FTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 101/253 (39%), Gaps = 41/253 (16%)
Query: 386 LGDGSYS---VCRRCVE-KSTGQEYAVKII------SRKIDCSEEINLLRACQGHPNIVN 435
LG+G + +CR E +TG++ AVK + + D +EI +LR H NIV
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVK 75
Query: 436 LHCV-FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
+ +D + K + + + Q+ + ++ SR
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQY 135
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFA---------CLKRESLHTPCFTLQYAAPEVLR 545
VHRDL N+L + +K+ DFG ++ +P F + APE L
Sbjct: 136 VHRDLAARNVLVE--SEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVF---WYAPECLM 190
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLCGRVPFHARSRDD 605
Q K + D+WS GV L +L CD S + L+ + G P H +
Sbjct: 191 QSK--FYIASDVWSFGVTLHELLTY--------CDSDSSPMALFLKMIG--PTHGQM--- 235
Query: 606 SALSIMARIKEGQ 618
+ ++ +KEG+
Sbjct: 236 TVTRLVNTLKEGK 248
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 48/104 (46%), Gaps = 17/104 (16%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI-KVVDFGFACLKRESLHTPC------ 533
Q+ + ++ S+ +HRDL N+L ++ DN+ K+ DFG A R+ H
Sbjct: 158 QVARGMEYLASKKCIHRDLAARNVLVTE---DNVMKIADFGLA---RDIHHIDXXKKTTN 211
Query: 534 --FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV+L + S Y
Sbjct: 212 GRLPVKWMAPEALFD--RIYTHQSDVWSFGVLLWEIFTLGGSPY 253
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/210 (20%), Positives = 89/210 (42%), Gaps = 24/210 (11%)
Query: 385 ILGDGSYS-VCRRCVEKSTGQE---YAVKIISRKIDCSEEINLLRACQ-----GHPNIVN 435
++G G + V + ++ S+G++ A+K + + ++ L H NI+
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 436 LHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
L V + D+ ++ F+ + ++R + A + ++ + V
Sbjct: 111 LEGVI-SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 496 HRDLKPENLLFSDPAGDNI--KVVDFGFACLKR---ESLHTPC---FTLQYAAPEVLRQD 547
HRDL N+L + N+ KV DFG + + E+ +T +++ APE +
Sbjct: 170 HRDLAARNILVN----SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYR 225
Query: 548 KSGYDENCDLWSLGVILVNVLRQDKSGYDE 577
K + D+WS G+++ V+ + Y E
Sbjct: 226 K--FTSASDVWSFGIVMWEVMTYGERPYWE 253
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI++L V + D +K FT + ++R + + + ++
Sbjct: 89 HPNIIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 147
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT------LQYAAPEV 543
VHRDL N+L + + KV DFG + + + T +++ APE
Sbjct: 148 SDMSAVHRDLAARNILVN--SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 205
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+ K + D+WS G+++ V+ + Y
Sbjct: 206 IAYRK--FTSASDVWSYGIVMWEVMSYGERPY 235
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 122 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 179
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 180 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 209
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 121 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 178
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 179 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 208
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 147 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 204
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 205 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 234
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 124 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 181
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 182 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 211
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI++L V + D +K FT + ++R + + + ++
Sbjct: 68 HPNIIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 126
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT------LQYAAPEV 543
VHRDL N+L + + KV DFG + + + T +++ APE
Sbjct: 127 SDMSYVHRDLAARNILVN--SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 184
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+ K + D+WS G+++ V+ + Y
Sbjct: 185 IAYRK--FTSASDVWSYGIVMWEVMSYGERPY 214
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 177 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 119 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 176
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 177 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPC----FTL 536
QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +S + +
Sbjct: 116 QLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMEDSTYYKASKGKLPI 173
Query: 537 QYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
++ APE + + + D+W GV + +L
Sbjct: 174 KWMAPESINFRR--FTSASDVWMFGVCMWEIL 203
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 11/152 (7%)
Query: 430 HPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFM 489
HPNI++L V + D +K FT + ++R + + + ++
Sbjct: 74 HPNIIHLEGVVT-KCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL 132
Query: 490 HSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT------LQYAAPEV 543
VHRDL N+L + + KV DFG + + + T +++ APE
Sbjct: 133 SDMSYVHRDLAARNILVN--SNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEA 190
Query: 544 LRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+ K + D+WS G+++ V+ + Y
Sbjct: 191 IAYRK--FTSASDVWSYGIVMWEVMSYGERPY 220
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 23/179 (12%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A-----CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
A + +++ APE L Y D+WS GV++ + S Y
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA 522
F+ I QL++ + ++HS+ +++RD+KPEN L P I ++DF A
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
Score = 36.2 bits (82), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
F+ I QL++ + ++HS+ +++RD+KPEN L+ G GN
Sbjct: 102 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI-GRPGN 143
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 10/105 (9%)
Query: 470 FTENEASRIMR--QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRE 527
F+ + AS I+ QL A+ ++ S+ VHRD+ N+L S + D +K+ DFG + +
Sbjct: 106 FSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVS--SNDCVKLGDFGLSRYMED 163
Query: 528 SLHTPC----FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
S +++ APE + + + D+W GV + +L
Sbjct: 164 STXXKASKGKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 132 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 191
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 192 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 249
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 250 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 304
Query: 574 GY 575
Y
Sbjct: 305 PY 306
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 66/179 (36%), Gaps = 23/179 (12%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A-----CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
A + +++ APE L Y D+WS GV++ + S Y
Sbjct: 204 ARDINNIDXXKKTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA 522
F+ I QL++ + ++HS+ +++RD+KPEN L P I ++DF A
Sbjct: 123 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
F+ I QL++ + ++HS+ +++RD+KPEN L+ G GN
Sbjct: 123 FSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLI-GRPGN 164
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 204 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 574 GY 575
Y
Sbjct: 259 PY 260
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/179 (20%), Positives = 67/179 (37%), Gaps = 23/179 (12%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A-----CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
A ++ +++ APE L Y D+WS GV++ + S Y
Sbjct: 204 ARDINNIDYYKNTTNGRLPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 73 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 132
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 133 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTE--NNVMKIADFGL 190
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 191 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 245
Query: 574 GY 575
Y
Sbjct: 246 PY 247
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA---------CLKRE 527
+Q+ + ++H++ +HR L N+L DN +K+ DFG A RE
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLL-----DNDRLVKIGDFGLAKAVPEGHEYYRVRE 173
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+P F + APE L++ K Y D+WS GV L +L
Sbjct: 174 DGDSPVF---WYAPECLKECKFYYAS--DVWSFGVTLYELL 209
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA 522
FT I QL++ + ++HS+ +++RD+KPEN L I ++DFG A
Sbjct: 94 FTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 919 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLLSGISGN 961
FT I QL++ + ++HS+ +++RD+KPEN L+ G GN
Sbjct: 94 FTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLI-GRQGN 135
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 480 RQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN---IKVVDFGFA---------CLKRE 527
+Q+ + ++H++ +HR L N+L DN +K+ DFG A RE
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLL-----DNDRLVKIGDFGLAKAVPEGHEYYRVRE 172
Query: 528 SLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+P F + APE L++ K Y D+WS GV L +L
Sbjct: 173 DGDSPVF---WYAPECLKECKFYYAS--DVWSFGVTLYELL 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 44/229 (19%)
Query: 379 DLDKAGILGDGSYSVCRRCVEKSTG----------QEYAVKIISRKIDCSEEINLLRACQ 428
D+ ++G+G++ + K G +EYA K R D + E+ +L
Sbjct: 23 DIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHR--DFAGELEVLCKLG 80
Query: 429 GHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRC-------GFTENEASRIMRQ 481
HPNI+NL + + Y D +R K R + AS + Q
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLR-KSRVLETDPAFAIANSTASTLSSQ 139
Query: 482 --------LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFA-----CLKR 526
+ + ++ + +HR+L N+L G+N K+ DFG + +K+
Sbjct: 140 QLLHFAADVARGMDYLSQKQFIHRNLAARNIL----VGENYVAKIADFGLSRGQEVYVKK 195
Query: 527 ESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
P +++ A E L + S Y N D+WS GV+L ++ + Y
Sbjct: 196 TMGRLP---VRWMAIESL--NYSVYTTNSDVWSYGVLLWEIVSLGGTPY 239
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 78 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 137
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 138 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 195
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 196 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 250
Query: 574 GY 575
Y
Sbjct: 251 PY 252
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 75 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 134
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 135 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 192
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 193 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 247
Query: 574 GY 575
Y
Sbjct: 248 PY 249
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 204 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 574 GY 575
Y
Sbjct: 259 PY 260
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 190 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 217 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 190 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +K+ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGL 203
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 204 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 574 GY 575
Y
Sbjct: 259 PY 260
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 193 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 190 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 186 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 185 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 208 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 49/238 (20%)
Query: 366 IFKGSLFF-EQYDMDLDKAGIL---GDGSYSV-----CRRCVEKSTGQEYAVKIISRKID 416
+F S+F +++++ +K +L G GS+ + R ++ AVK ++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 417 CSEEINLLR-------------------ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXX 457
E I L +G P +V + + ++ +Y
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE- 119
Query: 458 XXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVV 517
GR T E ++ ++ + +++++ VHRDL N + + +K+
Sbjct: 120 -----NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIG 172
Query: 518 DFGFACLKRESLHTPCF--------TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
DFG + R+ T + +++ APE L+ + + D+WS GV+L +
Sbjct: 173 DFG---MTRDIYETAYYRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 184 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 189 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 184 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 13/122 (10%)
Query: 461 RIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDN--IKVVD 518
R+ G + E I RQ+ A + ++ R VHRDL N L G+N +K+ D
Sbjct: 162 RVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCL----VGENMVVKIAD 217
Query: 519 FG-----FACLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
FG ++ ++ +++ PE + ++ Y D+W+ GV+L +
Sbjct: 218 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNR--YTTESDVWAYGVVLWEIFSYGLQ 275
Query: 574 GY 575
Y
Sbjct: 276 PY 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 185 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 186 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 187 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 186 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 186 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 180 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 177 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A L +E S+H
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMLDKEFDSVHNKTGAK 199
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 200 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 93/238 (39%), Gaps = 49/238 (20%)
Query: 366 IFKGSLFF-EQYDMDLDKAGIL---GDGSYSV-----CRRCVEKSTGQEYAVKIISRKID 416
+F S+F +++++ +K +L G GS+ + R ++ AVK ++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 417 CSEEINLLR-------------------ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXX 457
E I L +G P +V + + ++ +Y
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE- 119
Query: 458 XXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVV 517
GR T E ++ ++ + +++++ VHRDL N + + +K+
Sbjct: 120 -----NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIG 172
Query: 518 DFGFACLKRESLHTPCF--------TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
DFG + R+ T + +++ APE L+ + + D+WS GV+L +
Sbjct: 173 DFG---MTRDIYETDYYRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRE 527
FT + ++R + A + ++ G VHRDL N+L N+ KV DFG + + +
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD----SNLVCKVSDFGLSRVLED 203
Query: 528 SLHTPCFT------LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
T +++ APE + + D+WS GV++ VL + Y
Sbjct: 204 DPDAAXTTTGGKIPIRWTAPEAIAFRT--FSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 15/103 (14%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--------CLKRESLHTP 532
QL + ++ S+ +HRDL N+L ++ + +K+ DFG A K + P
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTTNGRLP 222
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV++ + S Y
Sbjct: 223 ---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 14/114 (12%)
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNI--KVVDFGFACLKRE 527
FT + ++R + A + ++ G VHRDL N+L N+ KV DFG + + +
Sbjct: 148 FTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD----SNLVCKVSDFGLSRVLED 203
Query: 528 SLHTPCFT------LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
T +++ APE + + D+WS GV++ VL + Y
Sbjct: 204 DPDAAYTTTGGKIPIRWTAPEAIAFRT--FSSASDVWSFGVVMWEVLAYGERPY 255
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-------CLKRESLHTPC 533
QL + ++ S+ +HRDL N+L ++ + +K+ DFG A K+ +
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTE--NNVMKIADFGLARDINNIDYYKKTT--NGR 220
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE L Y D+WS GV++ + S Y
Sbjct: 221 LPVKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGSPY 260
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 68/182 (37%), Gaps = 29/182 (15%)
Query: 416 DCSEEINLLRACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGF----- 470
D E+ +++ H NI+NL + Y + +R + G
Sbjct: 86 DLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYD 145
Query: 471 ---------TENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF 521
T + QL + ++ S+ +HRDL N+L ++ + +++ DFG
Sbjct: 146 INRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTE--NNVMRIADFGL 203
Query: 522 A--------CLKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
A K + P +++ APE L Y D+WS GV++ + S
Sbjct: 204 ARDINNIDYYKKTTNGRLP---VKWMAPEALFD--RVYTHQSDVWSFGVLMWEIFTLGGS 258
Query: 574 GY 575
Y
Sbjct: 259 PY 260
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/238 (18%), Positives = 92/238 (38%), Gaps = 49/238 (20%)
Query: 366 IFKGSLFF-EQYDMDLDKAGIL---GDGSYSV-----CRRCVEKSTGQEYAVKIISRKID 416
+F S+F +++++ +K +L G GS+ + R ++ AVK ++
Sbjct: 1 VFPSSVFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS 60
Query: 417 CSEEINLLR-------------------ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXX 457
E I L +G P +V + + ++ +Y
Sbjct: 61 LRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE- 119
Query: 458 XXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVV 517
GR T E ++ ++ + +++++ VHRDL N + + +K+
Sbjct: 120 -----NNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIG 172
Query: 518 DFGFACLKRESLHT--------PCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
DFG + R+ T +++ APE L+ + + D+WS GV+L +
Sbjct: 173 DFG---MTRDIXETDXXRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Composition-based stats.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 11/93 (11%)
Query: 479 MRQLVAAVHFMHSRGVVHRDLKPENLLFSDPA----GDNIKVVDFGFACLKRESLHTPCF 534
+R + A+ +HS+G+VH D+KP N+ GD +V+ G A P
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDP-- 220
Query: 535 TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+Y APE+L + Y D++SLG+ ++ V
Sbjct: 221 --RYMAPELL---QGSYGTAADVFSLGLTILEV 248
Score = 32.0 bits (71), Expect = 1.6, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 20/28 (71%)
Query: 928 MRQLVAAVHFMHSRGVVHRDLKPENLLL 955
+R + A+ +HS+G+VH D+KP N+ L
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFL 190
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHT----PCFT 535
Q+ + F+ S+ +HRDL N+L + G K+ DFG A +K +S +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARHIKNDSNYVVKGNARLP 233
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + Y D+WS G+ L + S Y
Sbjct: 234 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPY 271
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 185 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 190 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 185 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHT----PCFT 535
Q+ + F+ S+ +HRDL N+L + G K+ DFG A +K +S +
Sbjct: 169 QVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLP 226
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + Y D+WS G+ L + S Y
Sbjct: 227 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPY 264
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL-----KRESLHTPCFT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 183 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/166 (19%), Positives = 69/166 (41%), Gaps = 22/166 (13%)
Query: 411 ISRKIDCSEEINLLRAC-QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
+ + C + LL +G P +V + + ++ +Y GR
Sbjct: 72 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE------NNPGRPP 125
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
T E ++ ++ + +++++ VHRDL N + + +K+ DFG + R+
Sbjct: 126 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIGDFG---MTRDIY 180
Query: 530 HTPCF--------TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
T + +++ APE L+ + + D+WS GV+L +
Sbjct: 181 ETDYYRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 224
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 185 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHT----PCFT 535
Q+ + F+ S+ +HRDL N+L + G K+ DFG A +K +S +
Sbjct: 176 QVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLP 233
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + Y D+WS G+ L + S Y
Sbjct: 234 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPY 271
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACL---KRESLHTPC--FT 535
Q+ ++++ R +VHRDL N+L P ++K+ DFG A L + + H
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTP--QHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYD 576
+++ A E + Y D+WS GV + ++ YD
Sbjct: 187 IKWMALESILHRI--YTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA-CLKRESLHT----PCFT 535
Q+ + F+ S+ +HRDL N+L + G K+ DFG A +K +S +
Sbjct: 153 QVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLP 210
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + Y D+WS G+ L + S Y
Sbjct: 211 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPY 248
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 9/100 (9%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC-LKRESLHT----PCFT 535
Q+ + F+ S+ +HRDL N+L + G K+ DFG A +K +S +
Sbjct: 171 QVAKGMAFLASKNCIHRDLAARNILLTH--GRITKICDFGLARDIKNDSNYVVKGNARLP 228
Query: 536 LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ APE + Y D+WS G+ L + S Y
Sbjct: 229 VKWMAPESIFN--CVYTFESDVWSYGIFLWELFSLGSSPY 266
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 79/214 (36%), Gaps = 45/214 (21%)
Query: 386 LGDGSYSV-----CRRCVEKSTGQEYAVKIISRKIDCSEEINLLR--------------- 425
LG GS+ + R ++ AVK ++ E I L
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 426 ----ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQ 481
+G P +V + + ++ +Y GR T E ++ +
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE------NNPGRPPPTLQEMIQMAAE 135
Query: 482 LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT--------PC 533
+ + +++++ VHRDL N + + +K+ DFG + R+ T
Sbjct: 136 IADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIGDFG---MTRDIXETDXXRKGGKGL 190
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+++ APE L+ + + D+WS GV+L +
Sbjct: 191 LPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 222
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 200 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 257
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLC 593
+++ A E L+ K + D+WS GV+L ++ + Y D+ + + +Y +L
Sbjct: 258 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPYP---DVNTFDITVY-LLQ 311
Query: 594 GR 595
GR
Sbjct: 312 GR 313
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 465 KGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFAC- 523
KG G ++ I Q+ + + ++ S+ VHRDL N L A +K+ DFG +
Sbjct: 127 KGELGLSQ--MLHIASQIASGMVYLASQHFVHRDLATRNCLVG--ANLLVKIGDFGMSRD 182
Query: 524 -----LKRESLHTPCFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDK 572
R HT +++ PE + K + D+WS GVIL + K
Sbjct: 183 VYSTDYYRVGGHT-MLPIRWMPPESIMYRK--FTTESDVWSFGVILWEIFTYGK 233
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 408 VKIISRKIDCSEEINLLRAC-QGHPNIV-NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK 465
+KI+S +NLL AC G P +V +C + D ++ D ++
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN------FLRRKAEADLDKED 153
Query: 466 GRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK 525
GR + Q+ + F+ S+ +HRD+ N+L ++ G K+ DFG A
Sbjct: 154 GR-PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLA--- 207
Query: 526 RESLHTPCFT--------LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
R+ ++ + +++ APE + Y D+WS G++L +
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIF 256
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/214 (19%), Positives = 79/214 (36%), Gaps = 45/214 (21%)
Query: 386 LGDGSYSV-----CRRCVEKSTGQEYAVKIISRKIDCSEEINLLR--------------- 425
LG GS+ + R ++ AVK ++ E I L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 426 ----ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQ 481
+G P +V + + ++ +Y GR T E ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE------NNPGRPPPTLQEMIQMAAE 138
Query: 482 LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHT--------PC 533
+ + +++++ VHRDL N + + +K+ DFG + R+ T
Sbjct: 139 IADGMAYLNAKKFVHRDLAARNCMVAHDF--TVKIGDFG---MTRDIXETDXXRKGGKGL 193
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+++ APE L+ + + D+WS GV+L +
Sbjct: 194 LPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 73/171 (42%), Gaps = 24/171 (14%)
Query: 408 VKIISRKIDCSEEINLLRAC-QGHPNIV-NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK 465
+KI+S +NLL AC G P +V +C + D ++ D ++
Sbjct: 92 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN------FLRRKAEADLDKED 145
Query: 466 GRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK 525
GR + Q+ + F+ S+ +HRD+ N+L ++ G K+ DFG A
Sbjct: 146 GR-PLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLA--- 199
Query: 526 RESLHTPCFT--------LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
R+ ++ + +++ APE + Y D+WS G++L +
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIF 248
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 142 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 199
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 200 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 199 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 15/122 (12%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 139 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 196
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTMLC 593
+++ A E L+ K + D+WS GV+L ++ + Y D+ + + +Y +L
Sbjct: 197 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPYP---DVNTFDITVY-LLQ 250
Query: 594 GR 595
GR
Sbjct: 251 GR 252
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 141 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 198
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 199 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 38.5 bits (88), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + F+ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 146 QVAKGMKFLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEFDSVHNKTGAK 203
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 204 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQE--YAVKIISRKIDCSEEINLLRACQ-----GHPNIVNLHC 438
LG G++ R+ V + ++ A+K++ + + ++ ++R Q +P IV L
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
V Q E + R + + ++ Q+ + ++ + VHRD
Sbjct: 78 VCQAE--ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRD 135
Query: 499 LKPENLLFSDPAGDNIKVVDFGF--ACLKRESLHTP----CFTLQYAAPEVLRQDKSGYD 552
L N+L + K+ DFG A +S +T + L++ APE + K +
Sbjct: 136 LAARNVLLVNR--HYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FS 191
Query: 553 ENCDLWSLGVILVNVLRQDKSGY 575
D+WS GV + L + Y
Sbjct: 192 SRSDVWSYGVTMWEALSYGQKPY 214
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 82/226 (36%), Gaps = 51/226 (22%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 79
Query: 437 HCV-FQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVV 495
V + QK + + + Q+ + ++ ++ +
Sbjct: 80 KGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYI 139
Query: 496 HRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLRQ 546
HRDL N+L + + +K+ DFG + +E +P F + APE L +
Sbjct: 140 HRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLTE 194
Query: 547 DKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
K + D+WS GV+LY +
Sbjct: 195 SK--------------------------FSVASDVWSFGVVLYELF 214
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 70/171 (40%), Gaps = 20/171 (11%)
Query: 408 VKIISRKIDCSEEINLLRAC-QGHPNIV-NLHCVFQDEVHTYXXXXXXXXXXXXDRIRQK 465
+KI+S +NLL AC G P +V +C + D ++ D
Sbjct: 100 LKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLN---FLRRKSRVLETDPAFAI 156
Query: 466 GRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLK 525
+ + Q+ + F+ S+ +HRD+ N+L ++ G K+ DFG A
Sbjct: 157 ANSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLA--- 211
Query: 526 RESLHTPCFT--------LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
R+ ++ + +++ APE + Y D+WS G++L +
Sbjct: 212 RDIMNDSNYIVKGNARLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIF 260
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 107
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 108 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 166
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 167 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 221
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 222 ESK--------------------------FSVASDVWSFGVVLYELF 242
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF--------ACLKRESLHTP 532
Q+ + ++ +VHRDL N+L ++ G +K+ DFG + +KR P
Sbjct: 158 QISQGMQYLAEMSLVHRDLAARNILVAE--GRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ A E L Y D+WS GV+L ++
Sbjct: 216 ---VKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 37.7 bits (86), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 83
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 84 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 142
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 143 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 197
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 198 ESK--------------------------FSVASDVWSFGVVLYELF 218
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 81
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 82 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 140
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 141 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 195
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 196 ESK--------------------------FSVASDVWSFGVVLYELF 216
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 65/173 (37%), Gaps = 55/173 (31%)
Query: 478 IMRQLVAAVHFMHSR-GVVHRDLKPENLLF------------------------------ 506
I+RQ++ + ++HS+ ++H D+KPEN+L
Sbjct: 145 IIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAV 204
Query: 507 -SDPAGD--------------NIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGY 551
+ PA D +K+ D G AC + T QY + EVL +GY
Sbjct: 205 STAPAADLLVNPLDPRNADKIRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLI--GAGY 262
Query: 552 DENCDLWSLGVILVNVLRQD-----KSGYDENCDLWSLGVILYTMLCGRVPFH 599
D+WS + + D SG D + D + I+ L G +P H
Sbjct: 263 STPADIWSTACMAFELATGDYLFEPHSGEDYSRDEDHIAHII--ELLGSIPRH 313
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Query: 927 IMRQLVAAVHFMHSR-GVVHRDLKPENLLL 955
I+RQ++ + ++HS+ ++H D+KPEN+L+
Sbjct: 145 IIRQVLQGLDYLHSKCKIIHTDIKPENILM 174
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 136 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEFFKVKEPGESPIF---WYAPESLT 190
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 191 ESK--------------------------FSVASDVWSFGVVLYELF 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 79
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 80 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 138
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 139 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 193
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 194 ESK--------------------------FSVASDVWSFGVVLYELF 214
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 37.7 bits (86), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 136 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 190
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 191 ESK--------------------------FSVASDVWSFGVVLYELF 211
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 74
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 75 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 133
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 134 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 188
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 189 ESK--------------------------FSVASDVWSFGVVLYELF 209
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 80
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 81 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 139
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 140 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 194
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 195 ESK--------------------------FSVASDVWSFGVVLYELF 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 82
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 83 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 141
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 142 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 196
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 197 ESK--------------------------FSVASDVWSFGVVLYELF 217
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 76
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 77 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 135
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 136 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 190
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 191 ESK--------------------------FSVASDVWSFGVVLYELF 211
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 83/203 (40%), Gaps = 19/203 (9%)
Query: 386 LGDGSYSVCRRCVEKSTGQE--YAVKIISRKIDCSEEINLLRACQ-----GHPNIVNLHC 438
LG G++ R+ V + ++ A+K++ + + ++ ++R Q +P IV L
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 439 VFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRD 498
V Q E + R + + ++ Q+ + ++ + VHR+
Sbjct: 404 VCQAE--ALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRN 461
Query: 499 LKPENLLFSDPAGDNIKVVDFGF--ACLKRESLHTP----CFTLQYAAPEVLRQDKSGYD 552
L N+L + K+ DFG A +S +T + L++ APE + K +
Sbjct: 462 LAARNVLLVN--RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRK--FS 517
Query: 553 ENCDLWSLGVILVNVLRQDKSGY 575
D+WS GV + L + Y
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPY 540
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 94
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 154 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 208
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 209 ESK--------------------------FSVASDVWSFGVVLYELF 229
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEXXSVHNKTGAK 197
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 198 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 75
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 76 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 134
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 135 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 189
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 190 ESK--------------------------FSVASDVWSFGVVLYELF 210
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/214 (18%), Positives = 80/214 (37%), Gaps = 45/214 (21%)
Query: 386 LGDGSYSV-----CRRCVEKSTGQEYAVKIISRKIDCSEEINLLR--------------- 425
LG GS+ + R ++ AVK ++ E I L
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 426 ----ACQGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQ 481
+G P +V + + ++ +Y GR T E ++ +
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE------NNPGRPPPTLQEMIQMAAE 138
Query: 482 LVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCF------- 534
+ + +++++ VHR+L N + + +K+ DFG + R+ T +
Sbjct: 139 IADGMAYLNAKKFVHRNLAARNCMVAHDF--TVKIGDFG---MTRDIYETDYYRKGGKGL 193
Query: 535 -TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
+++ APE L+ + + D+WS GV+L +
Sbjct: 194 LPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 225
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.4 bits (85), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 159 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 216
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 217 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 199 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/166 (19%), Positives = 69/166 (41%), Gaps = 22/166 (13%)
Query: 411 ISRKIDCSEEINLLRAC-QGHPNIVNLHCVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCG 469
+ + C + LL +G P +V + + ++ +Y GR
Sbjct: 74 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAE------NNPGRPP 127
Query: 470 FTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESL 529
T E ++ ++ + +++++ VHR+L N + + +K+ DFG + R+
Sbjct: 128 PTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDF--TVKIGDFG---MTRDIY 182
Query: 530 HTPCF--------TLQYAAPEVLRQDKSGYDENCDLWSLGVILVNV 567
T + +++ APE L+ + + D+WS GV+L +
Sbjct: 183 ETDYYRKGGKGLLPVRWMAPESLKDGV--FTTSSDMWSFGVVLWEI 226
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 84/227 (37%), Gaps = 53/227 (23%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 94
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 95 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 153
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACL---------KRESLHTPCFTLQYAAPEVLR 545
+HRDL N+L + + +K+ DFG + +E +P F + APE L
Sbjct: 154 IHRDLATRNILVENE--NRVKIGDFGLTKVLPQDKEXXKVKEPGESPIF---WYAPESLT 208
Query: 546 QDKSGYDENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
+ K + D+WS GV+LY +
Sbjct: 209 ESK--------------------------FSVASDVWSFGVVLYELF 229
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF--------ACLKRESLHTP 532
Q+ + ++ +VHRDL N+L ++ G +K+ DFG + +KR P
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDVYEEDSYVKRSQGRIP 215
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ A E L Y D+WS GV+L ++
Sbjct: 216 ---VKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 133 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 190
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 191 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGF--------ACLKRESLHTP 532
Q+ + ++ +VHRDL N+L ++ G +K+ DFG + +KR P
Sbjct: 158 QISQGMQYLAEMKLVHRDLAARNILVAE--GRKMKISDFGLSRDVYEEDSXVKRSQGRIP 215
Query: 533 CFTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ A E L Y D+WS GV+L ++
Sbjct: 216 ---VKWMAIESLFDHI--YTTQSDVWSFGVLLWEIV 246
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 160 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 217
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 218 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 138 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 195
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 196 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 37.4 bits (85), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 139 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 196
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 197 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.4 bits (85), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 141 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 198
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 199 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 136 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 193
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 194 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFA--CLKRE--SLHTPC--- 533
Q+ + ++ S+ VHRDL N + + +KV DFG A +E S+H
Sbjct: 140 QVAKGMKYLASKKFVHRDLAARNCMLDEKF--TVKVADFGLARDMYDKEYYSVHNKTGAK 197
Query: 534 FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKSGY 575
+++ A E L+ K + D+WS GV+L ++ + Y
Sbjct: 198 LPVKWMALESLQTQK--FTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 481 QLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFT----- 535
Q+ + F+ S+ +HRD+ N+L ++ G K+ DFG A R+ ++ +
Sbjct: 172 QVAQGMAFLASKNCIHRDVAARNVLLTN--GHVAKIGDFGLA---RDIMNDSNYIVKGNA 226
Query: 536 ---LQYAAPEVLRQDKSGYDENCDLWSLGVILVNVL 568
+++ APE + Y D+WS G++L +
Sbjct: 227 RLPVKWMAPESIFD--CVYTVQSDVWSYGILLWEIF 260
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 45/223 (20%)
Query: 386 LGDGSYSVCRRC----VEKSTGQEYAVKIISRKI-----DCSEEINLLRACQGHPNIVNL 436
LG G++ C ++ +TG+ AVK + D EI +L++ Q H NIV
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQ-HDNIVKY 77
Query: 437 H--CVFQDEVHTYXXXXXXXXXXXXDRIRQKGRCGFTENEASRIMRQLVAAVHFMHSRGV 494
C + D + QK + + + Q+ + ++ ++
Sbjct: 78 KGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQICKGMEYLGTKRY 136
Query: 495 VHRDLKPENLLFSDPAGDNIKVVDFGFACLKRESLHTPCFTLQYAAPEVLRQDKSGY--- 551
+HR+L N+L + + +K+ DFG +VL QDK Y
Sbjct: 137 IHRNLATRNILVENE--NRVKIGDFGLT-------------------KVLPQDKEYYKVK 175
Query: 552 --DENCDLWSLGVILVNVLRQDKSGYDENCDLWSLGVILYTML 592
E+ W L +S + D+WS GV+LY +
Sbjct: 176 EPGESPIFWYAPESLT------ESKFSVASDVWSFGVVLYELF 212
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 12/123 (9%)
Query: 460 DRIRQ-KGRCGFTENEASRIMRQLVAAVHFMHSRGVVHRDLKPENLLFSDPAGDNIKVVD 518
D +R+ +GR G +++ + M Q+ + ++ +VHRDL N+L P +++K+ D
Sbjct: 107 DHVRENRGRLG-SQDLLNWCM-QIAKGMSYLEDVRLVHRDLAARNVLVKSP--NHVKITD 162
Query: 519 FGFACL---KRESLHTPC--FTLQYAAPEVLRQDKSGYDENCDLWSLGVILVNVLRQDKS 573
FG A L H +++ A E + + + + D+WS GV + ++
Sbjct: 163 FGLARLLDIDETEYHADGGKVPIKWMALESILRRR--FTHQSDVWSYGVTVWELMTFGAK 220
Query: 574 GYD 576
YD
Sbjct: 221 PYD 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,444,129
Number of Sequences: 62578
Number of extensions: 985606
Number of successful extensions: 7388
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 743
Number of HSP's successfully gapped in prelim test: 293
Number of HSP's that attempted gapping in prelim test: 2238
Number of HSP's gapped (non-prelim): 3478
length of query: 966
length of database: 14,973,337
effective HSP length: 108
effective length of query: 858
effective length of database: 8,214,913
effective search space: 7048395354
effective search space used: 7048395354
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)