Query psy11770
Match_columns 668
No_of_seqs 379 out of 3719
Neff 8.8
Searched_HMMs 46136
Date Fri Aug 16 18:31:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11770.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11770hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0204|consensus 100.0 8E-124 2E-128 996.6 48.3 630 7-668 319-953 (1034)
2 KOG0202|consensus 100.0 5E-109 1E-113 884.4 40.5 635 2-668 221-911 (972)
3 COG0474 MgtA Cation transport 100.0 5.5E-99 1E-103 878.2 54.8 603 2-667 246-855 (917)
4 TIGR01517 ATPase-IIB_Ca plasma 100.0 3.9E-97 8E-102 871.2 66.5 626 2-668 260-886 (941)
5 TIGR01116 ATPase-IIA1_Ca sarco 100.0 1.2E-95 3E-100 855.4 64.9 634 2-668 178-861 (917)
6 TIGR01523 ATPase-IID_K-Na pota 100.0 1.6E-95 3E-100 856.8 65.8 600 14-654 272-962 (1053)
7 TIGR01106 ATPase-IIC_X-K sodiu 100.0 1.3E-94 2.8E-99 851.8 65.6 623 2-668 243-928 (997)
8 TIGR01522 ATPase-IIA2_Ca golgi 100.0 2.3E-91 5E-96 817.5 64.4 585 2-668 223-825 (884)
9 PRK15122 magnesium-transportin 100.0 2.3E-87 4.9E-92 779.7 57.5 559 3-653 270-829 (903)
10 PRK10517 magnesium-transportin 100.0 4.5E-87 9.7E-92 775.9 55.9 559 2-653 270-829 (902)
11 TIGR01524 ATPase-IIIB_Mg magne 100.0 6.5E-86 1.4E-90 766.9 58.8 558 2-653 236-794 (867)
12 TIGR01657 P-ATPase-V P-type AT 100.0 6.9E-86 1.5E-90 782.7 52.6 599 2-668 347-1012(1054)
13 KOG0203|consensus 100.0 2.9E-87 6.3E-92 715.0 27.3 618 7-668 270-950 (1019)
14 TIGR01652 ATPase-Plipid phosph 100.0 4.8E-84 1E-88 769.4 53.2 582 2-609 228-937 (1057)
15 PLN03190 aminophospholipid tra 100.0 2.9E-81 6.4E-86 737.5 58.5 584 2-609 310-1040(1178)
16 TIGR01647 ATPase-IIIA_H plasma 100.0 1.9E-79 4.1E-84 704.3 57.0 541 2-653 184-727 (755)
17 KOG0206|consensus 100.0 4.8E-76 1E-80 669.7 23.6 588 2-609 257-963 (1151)
18 KOG0210|consensus 100.0 2.1E-70 4.5E-75 571.8 24.7 556 2-605 303-945 (1051)
19 KOG0208|consensus 100.0 1E-68 2.2E-73 581.2 35.9 552 68-667 416-1060(1140)
20 PRK14010 potassium-transportin 100.0 4.9E-62 1.1E-66 542.1 41.3 387 2-531 199-585 (673)
21 PRK01122 potassium-transportin 100.0 2.7E-60 5.8E-65 528.7 44.0 392 2-533 199-594 (679)
22 TIGR01497 kdpB K+-transporting 100.0 7.2E-57 1.6E-61 500.0 41.5 384 2-524 200-583 (675)
23 TIGR01494 ATPase_P-type ATPase 100.0 7.6E-54 1.6E-58 475.4 40.8 358 3-532 126-484 (499)
24 COG2217 ZntA Cation transport 100.0 5E-54 1.1E-58 478.1 39.3 380 2-532 303-682 (713)
25 KOG0209|consensus 100.0 1.7E-54 3.6E-59 460.6 32.0 539 68-668 427-1087(1160)
26 KOG0207|consensus 100.0 1.9E-52 4.1E-57 455.1 31.1 433 2-567 470-906 (951)
27 PRK11033 zntA zinc/cadmium/mer 100.0 3.8E-51 8.2E-56 468.6 42.0 375 2-532 334-711 (741)
28 TIGR01525 ATPase-IB_hvy heavy 100.0 3.1E-48 6.7E-53 434.5 37.5 382 4-533 149-531 (556)
29 PRK10671 copA copper exporting 100.0 6E-47 1.3E-51 442.6 40.8 379 2-530 414-793 (834)
30 TIGR01511 ATPase-IB1_Cu copper 100.0 4.8E-47 1E-51 423.6 38.1 367 2-532 183-549 (562)
31 KOG0205|consensus 100.0 2.2E-48 4.7E-53 405.1 24.3 407 70-554 276-688 (942)
32 TIGR01512 ATPase-IB2_Cd heavy 100.0 1.4E-46 2.9E-51 418.6 34.9 363 2-532 146-509 (536)
33 COG2216 KdpB High-affinity K+ 100.0 4.2E-39 9.1E-44 329.0 27.5 382 2-520 199-580 (681)
34 PF00702 Hydrolase: haloacid d 99.9 1.3E-22 2.9E-27 200.5 14.9 97 332-468 115-215 (215)
35 PF00689 Cation_ATPase_C: Cati 99.7 5.5E-17 1.2E-21 156.1 7.7 125 538-667 1-127 (182)
36 COG4087 Soluble P-type ATPase 99.6 2.3E-14 5E-19 122.0 12.3 126 333-501 19-146 (152)
37 PRK10513 sugar phosphate phosp 99.6 1.6E-14 3.4E-19 148.3 12.4 71 431-503 196-266 (270)
38 PF13246 Hydrolase_like2: Puta 99.5 3E-14 6.4E-19 119.5 8.5 71 191-264 19-91 (91)
39 COG0561 Cof Predicted hydrolas 99.5 2E-13 4.4E-18 139.5 13.4 155 344-503 20-259 (264)
40 PRK15126 thiamin pyrimidine py 99.5 2.3E-13 5E-18 139.7 12.9 166 332-502 10-259 (272)
41 PRK10976 putative hydrolase; P 99.5 3.9E-13 8.5E-18 137.5 13.5 71 431-503 190-262 (266)
42 PRK01158 phosphoglycolate phos 99.5 4.1E-13 8.9E-18 134.2 12.3 155 344-503 20-227 (230)
43 TIGR01482 SPP-subfamily Sucros 99.4 1.4E-12 3E-17 129.9 12.6 154 344-502 15-222 (225)
44 PF08282 Hydrolase_3: haloacid 99.4 1.4E-12 3.1E-17 131.8 12.6 154 343-501 14-254 (254)
45 TIGR01487 SPP-like sucrose-pho 99.4 4.9E-13 1.1E-17 132.2 8.5 153 344-501 18-215 (215)
46 PLN02887 hydrolase family prot 99.4 1.3E-12 2.9E-17 144.7 12.0 71 431-503 507-577 (580)
47 PRK10530 pyridoxal phosphate ( 99.4 2.6E-12 5.5E-17 132.0 11.8 70 431-502 199-268 (272)
48 PRK03669 mannosyl-3-phosphogly 99.2 5E-11 1.1E-15 122.2 12.0 158 344-503 24-266 (271)
49 KOG4383|consensus 99.2 8.6E-10 1.9E-14 117.4 20.6 312 252-573 698-1149(1354)
50 TIGR00099 Cof-subfamily Cof su 99.2 1.2E-10 2.6E-15 118.4 13.1 69 431-501 188-256 (256)
51 PRK11133 serB phosphoserine ph 99.2 1.1E-10 2.4E-15 121.2 11.7 135 344-502 181-316 (322)
52 TIGR01486 HAD-SF-IIB-MPGP mann 99.2 1.8E-10 4E-15 117.0 12.2 72 430-503 175-254 (256)
53 TIGR02726 phenyl_P_delta pheny 99.1 2.6E-10 5.6E-15 107.0 10.1 107 350-497 40-146 (169)
54 TIGR02471 sucr_syn_bact_C sucr 99.1 3.9E-10 8.5E-15 113.1 9.8 72 430-503 158-233 (236)
55 COG0560 SerB Phosphoserine pho 99.1 7.5E-10 1.6E-14 108.2 11.3 124 343-490 76-200 (212)
56 TIGR01670 YrbI-phosphatas 3-de 99.1 8.8E-10 1.9E-14 102.6 11.2 109 352-501 36-145 (154)
57 TIGR02137 HSK-PSP phosphoserin 99.1 1.4E-09 3E-14 105.9 11.9 130 344-504 68-198 (203)
58 COG1778 Low specificity phosph 99.0 1.3E-09 2.7E-14 96.8 9.6 120 351-511 42-165 (170)
59 PRK00192 mannosyl-3-phosphogly 99.0 1.8E-09 3.9E-14 110.8 12.4 70 431-502 190-267 (273)
60 TIGR00338 serB phosphoserine p 99.0 9.5E-10 2.1E-14 109.0 10.0 133 344-500 85-218 (219)
61 PRK09484 3-deoxy-D-manno-octul 99.0 2.5E-09 5.4E-14 102.6 9.7 115 351-506 55-173 (183)
62 TIGR01485 SPP_plant-cyano sucr 98.9 1E-08 2.2E-13 103.8 11.6 159 342-503 19-245 (249)
63 PLN02382 probable sucrose-phos 98.7 7.1E-08 1.5E-12 104.1 12.7 157 344-503 28-258 (413)
64 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.7 4.6E-08 1E-12 95.4 9.1 121 344-486 80-200 (201)
65 PF00122 E1-E2_ATPase: E1-E2 A 98.7 2.9E-08 6.2E-13 99.2 7.5 97 5-116 134-230 (230)
66 TIGR02463 MPGP_rel mannosyl-3- 98.6 1.8E-07 4E-12 92.8 10.9 42 431-473 179-220 (221)
67 TIGR02461 osmo_MPG_phos mannos 98.6 1.5E-07 3.3E-12 93.4 9.6 43 342-384 13-55 (225)
68 PRK13582 thrH phosphoserine ph 98.6 3.1E-07 6.7E-12 89.9 10.9 126 344-502 68-196 (205)
69 KOG1615|consensus 98.5 1.8E-07 4E-12 86.0 6.5 125 344-490 88-216 (227)
70 PRK10187 trehalose-6-phosphate 98.5 5.5E-07 1.2E-11 91.7 10.8 151 344-502 36-241 (266)
71 PRK12702 mannosyl-3-phosphogly 98.3 2.7E-06 5.9E-11 85.4 10.5 42 343-384 17-58 (302)
72 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.3 2.1E-06 4.5E-11 83.9 9.2 111 342-474 85-197 (202)
73 PTZ00174 phosphomannomutase; P 98.3 2.9E-06 6.4E-11 85.6 10.6 54 430-489 187-245 (247)
74 PLN02954 phosphoserine phospha 98.3 5E-06 1.1E-10 82.6 11.7 128 344-500 84-222 (224)
75 TIGR03333 salvage_mtnX 2-hydro 98.3 5E-06 1.1E-10 82.0 11.1 137 343-502 69-209 (214)
76 PRK08238 hypothetical protein; 98.3 4.7E-05 1E-09 83.6 19.5 98 344-479 72-169 (479)
77 PRK14502 bifunctional mannosyl 98.3 4.7E-06 1E-10 92.8 11.6 39 345-383 434-472 (694)
78 COG0546 Gph Predicted phosphat 98.2 5.1E-06 1.1E-10 82.3 10.2 128 342-502 87-218 (220)
79 PF12710 HAD: haloacid dehalog 98.2 2.5E-06 5.5E-11 82.4 7.6 96 347-465 92-192 (192)
80 TIGR01484 HAD-SF-IIB HAD-super 98.2 5.6E-06 1.2E-10 81.0 9.7 129 344-473 17-204 (204)
81 TIGR01488 HAD-SF-IB Haloacid D 98.2 2.5E-06 5.4E-11 81.3 7.0 103 345-467 74-177 (177)
82 PRK13222 phosphoglycolate phos 98.2 9.9E-06 2.2E-10 80.5 11.3 128 343-503 92-223 (226)
83 PRK09552 mtnX 2-hydroxy-3-keto 98.2 1.1E-05 2.4E-10 79.9 10.7 104 344-472 74-184 (219)
84 TIGR01454 AHBA_synth_RP 3-amin 98.1 1.5E-05 3.2E-10 78.1 9.7 125 344-501 75-203 (205)
85 cd01427 HAD_like Haloacid deha 98.1 1.6E-05 3.5E-10 71.6 8.7 117 340-471 20-137 (139)
86 PF05116 S6PP: Sucrose-6F-phos 98.0 8.9E-06 1.9E-10 81.9 6.8 72 430-503 164-244 (247)
87 PRK14501 putative bifunctional 98.0 1.9E-05 4.2E-10 92.1 10.5 149 344-502 514-721 (726)
88 TIGR01489 DKMTPPase-SF 2,3-dik 98.0 2E-05 4.4E-10 75.7 8.1 115 343-472 71-186 (188)
89 PRK13223 phosphoglycolate phos 98.0 2.9E-05 6.4E-10 79.4 9.3 125 343-502 100-230 (272)
90 PRK13225 phosphoglycolate phos 98.0 5.6E-05 1.2E-09 77.2 11.3 122 344-501 142-267 (273)
91 PRK10826 2-deoxyglucose-6-phos 97.9 3.3E-05 7.2E-10 76.6 8.9 123 343-498 91-216 (222)
92 TIGR01449 PGP_bact 2-phosphogl 97.9 4.2E-05 9.1E-10 75.2 9.3 122 344-498 85-210 (213)
93 PRK13288 pyrophosphatase PpaX; 97.8 8.1E-05 1.8E-09 73.4 9.7 125 344-501 82-210 (214)
94 TIGR01545 YfhB_g-proteo haloac 97.8 0.00013 2.9E-09 71.5 9.5 107 344-474 94-201 (210)
95 PRK13226 phosphoglycolate phos 97.7 0.00013 2.8E-09 72.7 9.6 125 344-501 95-224 (229)
96 PRK11590 hypothetical protein; 97.7 0.00025 5.5E-09 69.7 11.0 106 344-474 95-202 (211)
97 TIGR01422 phosphonatase phosph 97.7 0.00022 4.8E-09 72.2 10.2 96 344-469 99-195 (253)
98 TIGR01544 HAD-SF-IE haloacid d 97.7 0.00055 1.2E-08 69.1 12.7 140 344-499 121-271 (277)
99 TIGR03351 PhnX-like phosphonat 97.6 0.00033 7.1E-09 69.3 10.2 124 343-500 86-218 (220)
100 smart00775 LNS2 LNS2 domain. T 97.6 0.00052 1.1E-08 63.9 10.8 112 342-471 25-142 (157)
101 PRK13478 phosphonoacetaldehyde 97.6 0.00054 1.2E-08 70.1 11.6 101 344-474 101-205 (267)
102 PLN02770 haloacid dehalogenase 97.6 0.00037 7.9E-09 70.4 10.2 115 344-490 108-226 (248)
103 PLN03243 haloacid dehalogenase 97.5 0.00048 1E-08 69.9 10.3 122 344-498 109-231 (260)
104 PLN02580 trehalose-phosphatase 97.5 0.00038 8.2E-09 73.5 9.7 67 430-502 300-374 (384)
105 TIGR00685 T6PP trehalose-phosp 97.5 0.00011 2.4E-09 74.0 5.3 71 426-502 162-240 (244)
106 PRK06698 bifunctional 5'-methy 97.4 0.00053 1.2E-08 75.8 10.0 124 344-503 330-455 (459)
107 TIGR01662 HAD-SF-IIIA HAD-supe 97.4 0.00069 1.5E-08 61.1 8.7 94 343-471 24-127 (132)
108 PLN02205 alpha,alpha-trehalose 97.4 0.00063 1.4E-08 79.9 9.9 164 332-502 604-842 (854)
109 PRK14988 GMP/IMP nucleotidase; 97.4 0.00086 1.9E-08 66.6 9.2 96 344-470 93-188 (224)
110 PRK11587 putative phosphatase; 97.4 0.0013 2.8E-08 65.0 10.5 114 344-490 83-198 (218)
111 TIGR01548 HAD-SF-IA-hyp1 haloa 97.3 0.00053 1.2E-08 66.6 7.1 93 343-467 105-197 (197)
112 PRK06769 hypothetical protein; 97.3 0.0015 3.2E-08 62.1 9.6 95 345-472 29-134 (173)
113 COG4030 Uncharacterized protei 97.2 0.0027 5.8E-08 60.4 10.5 150 344-502 83-262 (315)
114 PRK08942 D,D-heptose 1,7-bisph 97.2 0.0031 6.7E-08 60.3 11.0 128 344-502 29-177 (181)
115 PLN02423 phosphomannomutase 97.2 0.0023 5E-08 64.4 10.3 39 430-474 188-231 (245)
116 PLN02779 haloacid dehalogenase 97.1 0.0014 2.9E-08 67.7 8.3 118 344-490 144-263 (286)
117 TIGR01428 HAD_type_II 2-haloal 97.1 0.0019 4E-08 62.8 8.5 97 344-471 92-188 (198)
118 PRK11009 aphA acid phosphatase 97.1 0.0021 4.6E-08 63.8 8.5 89 344-470 114-206 (237)
119 PLN02575 haloacid dehalogenase 97.0 0.0039 8.5E-08 66.1 10.5 120 344-497 216-337 (381)
120 PHA02530 pseT polynucleotide k 97.0 0.0016 3.4E-08 67.8 7.3 107 341-471 184-292 (300)
121 TIGR02253 CTE7 HAD superfamily 97.0 0.0029 6.3E-08 62.5 8.5 96 344-470 94-190 (221)
122 TIGR01685 MDP-1 magnesium-depe 96.9 0.0043 9.3E-08 58.6 8.8 116 334-473 35-155 (174)
123 PF13419 HAD_2: Haloacid dehal 96.9 0.0012 2.5E-08 62.2 4.8 98 343-471 76-173 (176)
124 TIGR01509 HAD-SF-IA-v3 haloaci 96.9 0.0047 1E-07 58.8 8.9 95 344-470 85-179 (183)
125 TIGR02009 PGMB-YQAB-SF beta-ph 96.9 0.0033 7.1E-08 60.2 7.8 95 344-471 88-182 (185)
126 TIGR01990 bPGM beta-phosphoglu 96.9 0.0022 4.8E-08 61.3 6.6 95 344-471 87-181 (185)
127 TIGR01656 Histidinol-ppas hist 96.8 0.0048 1E-07 56.8 8.3 101 344-472 27-142 (147)
128 TIGR02254 YjjG/YfnB HAD superf 96.8 0.0032 7E-08 62.2 7.5 95 344-470 97-193 (224)
129 TIGR01668 YqeG_hyp_ppase HAD s 96.8 0.0052 1.1E-07 58.1 8.4 87 344-470 43-131 (170)
130 TIGR01672 AphA HAD superfamily 96.8 0.0049 1.1E-07 61.3 8.2 40 345-384 115-158 (237)
131 PLN02940 riboflavin kinase 96.8 0.0035 7.5E-08 67.4 7.6 98 344-472 93-191 (382)
132 COG4359 Uncharacterized conser 96.7 0.0038 8.3E-08 57.5 6.2 108 344-472 73-183 (220)
133 PRK09449 dUMP phosphatase; Pro 96.7 0.0065 1.4E-07 60.2 8.6 122 344-501 95-222 (224)
134 PLN02811 hydrolase 96.6 0.0089 1.9E-07 59.1 8.8 100 344-472 78-181 (220)
135 COG2179 Predicted hydrolase of 96.5 0.019 4.1E-07 52.5 9.5 115 285-470 18-133 (175)
136 TIGR01549 HAD-SF-IA-v1 haloaci 96.5 0.0079 1.7E-07 55.7 7.6 90 345-468 65-154 (154)
137 COG3769 Predicted hydrolase (H 96.5 0.013 2.8E-07 55.8 8.8 38 347-384 26-63 (274)
138 PLN03017 trehalose-phosphatase 96.5 0.015 3.2E-07 61.2 10.1 67 430-502 282-356 (366)
139 TIGR00213 GmhB_yaeD D,D-heptos 96.5 0.011 2.5E-07 56.1 8.7 121 345-490 27-169 (176)
140 TIGR01261 hisB_Nterm histidino 96.5 0.0061 1.3E-07 57.0 6.5 98 344-472 29-144 (161)
141 smart00577 CPDc catalytic doma 96.4 0.003 6.4E-08 58.3 3.8 95 344-472 45-139 (148)
142 PF06888 Put_Phosphatase: Puta 96.4 0.0086 1.9E-07 59.2 7.2 117 344-471 71-195 (234)
143 TIGR01681 HAD-SF-IIIC HAD-supe 96.3 0.0099 2.2E-07 53.3 6.5 95 344-466 29-126 (128)
144 TIGR02252 DREG-2 REG-2-like, H 96.3 0.015 3.2E-07 56.6 8.2 95 344-470 105-200 (203)
145 TIGR01686 FkbH FkbH-like domai 96.1 0.015 3.3E-07 61.0 7.9 95 344-474 31-129 (320)
146 KOG3120|consensus 96.1 0.025 5.3E-07 54.0 8.0 125 344-480 84-215 (256)
147 PRK10563 6-phosphogluconate ph 96.1 0.013 2.8E-07 57.9 6.6 96 344-472 88-183 (221)
148 PRK05446 imidazole glycerol-ph 96.0 0.023 5E-07 59.9 8.5 101 344-472 30-145 (354)
149 TIGR01664 DNA-3'-Pase DNA 3'-p 96.0 0.024 5.2E-07 53.3 7.8 94 345-471 43-158 (166)
150 PRK10444 UMP phosphatase; Prov 96.0 0.073 1.6E-06 53.6 11.6 48 337-384 10-60 (248)
151 TIGR01458 HAD-SF-IIA-hyp3 HAD- 96.0 0.16 3.5E-06 51.5 14.2 40 345-384 22-64 (257)
152 TIGR01457 HAD-SF-IIA-hyp2 HAD- 95.9 0.087 1.9E-06 53.1 11.9 46 341-386 14-62 (249)
153 TIGR01533 lipo_e_P4 5'-nucleot 95.9 0.038 8.3E-07 55.8 9.1 86 343-465 117-205 (266)
154 TIGR01691 enolase-ppase 2,3-di 95.8 0.053 1.1E-06 53.4 9.4 97 343-472 94-193 (220)
155 PLN02919 haloacid dehalogenase 95.7 0.043 9.3E-07 66.7 10.0 117 344-490 161-280 (1057)
156 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.0 0.14 3.1E-06 51.3 9.9 48 337-384 17-66 (242)
157 PHA02597 30.2 hypothetical pro 95.0 0.073 1.6E-06 51.5 7.4 96 344-472 74-171 (197)
158 TIGR02247 HAD-1A3-hyp Epoxide 95.0 0.045 9.8E-07 53.6 6.0 93 344-471 94-192 (211)
159 PF08235 LNS2: LNS2 (Lipin/Ned 94.9 0.27 5.8E-06 45.3 10.2 110 342-471 25-142 (157)
160 TIGR01993 Pyr-5-nucltdase pyri 94.8 0.12 2.5E-06 49.4 8.1 95 344-471 84-181 (184)
161 TIGR01675 plant-AP plant acid 94.6 0.19 4.1E-06 49.5 9.0 42 343-384 119-163 (229)
162 PLN02151 trehalose-phosphatase 94.6 0.14 3E-06 53.8 8.4 67 430-502 268-342 (354)
163 PRK09456 ?-D-glucose-1-phospha 94.2 0.12 2.5E-06 50.2 6.7 98 344-472 84-182 (199)
164 PF09419 PGP_phosphatase: Mito 93.7 0.28 6E-06 45.9 7.8 91 342-468 57-157 (168)
165 PLN02645 phosphoglycolate phos 93.5 0.28 6.1E-06 51.2 8.4 48 337-384 37-87 (311)
166 PF02358 Trehalose_PPase: Treh 93.3 0.1 2.3E-06 52.0 4.6 67 423-491 157-233 (235)
167 COG0637 Predicted phosphatase/ 93.2 0.52 1.1E-05 46.6 9.4 98 343-471 85-182 (221)
168 PRK10725 fructose-1-P/6-phosph 92.6 0.31 6.8E-06 46.5 6.7 94 345-471 89-182 (188)
169 COG0647 NagD Predicted sugar p 91.9 1.9 4.1E-05 43.6 11.5 46 336-381 16-61 (269)
170 COG1877 OtsB Trehalose-6-phosp 90.9 0.72 1.6E-05 46.6 7.3 132 342-474 38-228 (266)
171 COG0241 HisB Histidinol phosph 90.8 1.1 2.4E-05 42.4 7.9 104 345-470 32-144 (181)
172 PF13344 Hydrolase_6: Haloacid 89.6 0.25 5.5E-06 42.1 2.4 48 337-384 7-57 (101)
173 PRK10748 flavin mononucleotide 89.1 0.74 1.6E-05 46.0 5.8 93 344-473 113-206 (238)
174 COG1011 Predicted hydrolase (H 88.7 2 4.3E-05 42.3 8.6 95 344-470 99-194 (229)
175 TIGR01684 viral_ppase viral ph 88.3 1.1 2.4E-05 45.6 6.2 52 345-397 146-198 (301)
176 TIGR01663 PNK-3'Pase polynucle 88.1 1.9 4.1E-05 48.1 8.6 39 345-383 198-248 (526)
177 PLN02177 glycerol-3-phosphate 87.6 2 4.2E-05 47.8 8.3 101 345-474 111-214 (497)
178 PHA03398 viral phosphatase sup 85.5 1.9 4.2E-05 43.9 6.3 50 346-396 150-199 (303)
179 TIGR02251 HIF-SF_euk Dullard-l 84.7 0.55 1.2E-05 43.9 1.8 96 342-472 40-136 (162)
180 PF03767 Acid_phosphat_B: HAD 84.6 2 4.4E-05 42.6 6.0 40 344-383 115-157 (229)
181 PLN03063 alpha,alpha-trehalose 83.8 8.9 0.00019 45.5 11.7 38 345-382 533-571 (797)
182 TIGR01689 EcbF-BcbF capsule bi 83.7 1.2 2.6E-05 39.6 3.4 33 343-375 23-55 (126)
183 TIGR01493 HAD-SF-IA-v2 Haloaci 83.6 2.1 4.5E-05 40.2 5.4 86 344-467 90-175 (175)
184 TIGR01680 Veg_Stor_Prot vegeta 82.7 7.5 0.00016 39.3 9.0 41 343-384 144-188 (275)
185 PTZ00445 p36-lilke protein; Pr 81.3 13 0.00029 36.0 9.7 107 344-469 75-199 (219)
186 KOG2882|consensus 79.0 27 0.00058 35.7 11.3 48 337-384 31-81 (306)
187 TIGR02244 HAD-IG-Ncltidse HAD 76.3 9.9 0.00021 40.0 7.9 38 345-382 185-223 (343)
188 PLN02645 phosphoglycolate phos 75.0 12 0.00026 39.0 8.2 56 444-501 243-307 (311)
189 TIGR01452 PGP_euk phosphoglyco 74.7 6.5 0.00014 40.3 6.1 45 340-384 14-61 (279)
190 PF13242 Hydrolase_like: HAD-h 74.4 2 4.4E-05 34.1 1.8 47 444-490 17-70 (75)
191 COG3700 AphA Acid phosphatase 74.4 8.9 0.00019 35.7 6.0 86 345-472 115-209 (237)
192 PLN03064 alpha,alpha-trehalose 74.1 21 0.00046 42.8 10.7 38 345-382 623-661 (934)
193 PF12689 Acid_PPase: Acid Phos 73.3 15 0.00032 34.5 7.5 101 344-472 45-146 (169)
194 PF05822 UMPH-1: Pyrimidine 5' 72.9 9.7 0.00021 37.9 6.5 130 344-493 90-233 (246)
195 KOG3040|consensus 70.2 10 0.00023 36.3 5.6 51 334-384 13-66 (262)
196 KOG3085|consensus 69.1 16 0.00034 36.3 6.9 105 345-482 114-220 (237)
197 TIGR01452 PGP_euk phosphoglyco 69.1 9.1 0.0002 39.2 5.7 28 444-471 215-243 (279)
198 TIGR01459 HAD-SF-IIA-hyp4 HAD- 68.8 6.7 0.00014 39.2 4.5 96 346-471 140-237 (242)
199 TIGR01460 HAD-SF-IIA Haloacid 61.1 16 0.00035 36.3 5.6 48 337-384 7-58 (236)
200 COG2503 Predicted secreted aci 61.0 43 0.00094 33.1 8.0 85 344-467 122-212 (274)
201 PF00389 2-Hacid_dh: D-isomer 53.6 1.6E+02 0.0034 26.0 10.7 28 447-474 60-89 (133)
202 KOG3109|consensus 51.0 1.1E+02 0.0025 29.8 8.9 102 340-469 95-199 (244)
203 PF11019 DUF2608: Protein of u 50.6 39 0.00084 34.0 6.3 112 345-466 82-196 (252)
204 TIGR02250 FCP1_euk FCP1-like p 47.4 30 0.00064 32.0 4.5 41 343-384 57-97 (156)
205 KOG2914|consensus 46.9 47 0.001 32.7 6.0 100 344-472 92-193 (222)
206 TIGR02468 sucrsPsyn_pln sucros 45.1 1.4E+02 0.0031 36.4 10.6 44 430-474 955-1001(1050)
207 PF12710 HAD: haloacid dehalog 44.7 10 0.00022 35.9 1.0 14 123-136 1-14 (192)
208 PRK14188 bifunctional 5,10-met 44.5 87 0.0019 32.3 7.8 64 424-490 137-207 (296)
209 PRK14194 bifunctional 5,10-met 39.7 1.4E+02 0.0031 30.8 8.4 64 424-490 138-208 (301)
210 PF13380 CoA_binding_2: CoA bi 37.7 57 0.0012 28.4 4.6 39 345-383 64-103 (116)
211 PRK14174 bifunctional 5,10-met 35.2 1.5E+02 0.0032 30.6 7.7 63 424-490 138-212 (295)
212 cd05017 SIS_PGI_PMI_1 The memb 34.8 67 0.0014 27.9 4.6 38 344-383 54-91 (119)
213 COG0279 GmhA Phosphoheptose is 32.2 1.1E+02 0.0024 28.4 5.5 33 346-378 122-154 (176)
214 COG1210 GalU UDP-glucose pyrop 32.1 3E+02 0.0066 28.0 9.0 27 346-372 35-62 (291)
215 TIGR01460 HAD-SF-IIA Haloacid 29.7 2.5E+02 0.0053 27.8 8.3 28 444-471 201-230 (236)
216 cd02071 MM_CoA_mut_B12_BD meth 29.7 59 0.0013 28.5 3.4 82 288-384 21-104 (122)
217 cd00860 ThrRS_anticodon ThrRS 29.0 1.2E+02 0.0025 24.5 4.9 45 339-383 7-52 (91)
218 cd02067 B12-binding B12 bindin 28.8 97 0.0021 26.8 4.6 82 288-384 21-104 (119)
219 PRK14189 bifunctional 5,10-met 28.1 2.2E+02 0.0049 29.1 7.6 65 424-491 137-208 (285)
220 PF06941 NT5C: 5' nucleotidase 28.0 46 0.001 31.7 2.6 29 344-372 73-101 (191)
221 PF08645 PNK3P: Polynucleotide 27.7 55 0.0012 30.3 2.9 25 345-369 30-54 (159)
222 PRK14182 bifunctional 5,10-met 26.9 3.1E+02 0.0067 28.1 8.3 64 424-491 136-207 (282)
223 PF03129 HGTP_anticodon: Antic 26.9 1.7E+02 0.0037 23.8 5.6 47 337-383 3-53 (94)
224 TIGR01501 MthylAspMutase methy 26.8 1E+02 0.0022 27.8 4.3 81 288-383 23-111 (134)
225 PRK14177 bifunctional 5,10-met 25.7 4E+02 0.0088 27.3 8.9 64 424-490 138-208 (284)
226 cd05008 SIS_GlmS_GlmD_1 SIS (S 25.2 68 0.0015 27.9 3.0 30 344-373 57-86 (126)
227 cd05014 SIS_Kpsf KpsF-like pro 24.0 62 0.0013 28.3 2.5 30 345-374 59-88 (128)
228 PRK02261 methylaspartate mutas 23.5 1.2E+02 0.0027 27.2 4.3 81 288-383 25-113 (137)
229 PRK14169 bifunctional 5,10-met 23.2 3.5E+02 0.0077 27.7 7.9 65 424-491 135-206 (282)
230 COG5012 Predicted cobalamin bi 22.5 74 0.0016 31.1 2.7 83 287-384 125-208 (227)
231 cd05710 SIS_1 A subgroup of th 22.4 81 0.0018 27.4 2.9 30 344-373 58-87 (120)
232 PF14336 DUF4392: Domain of un 21.4 1.7E+02 0.0036 30.2 5.3 38 346-383 62-100 (291)
233 COG4420 Predicted membrane pro 21.3 2.2E+02 0.0047 27.1 5.4 47 12-60 39-85 (191)
234 TIGR00640 acid_CoA_mut_C methy 20.8 1E+02 0.0023 27.5 3.2 83 287-384 23-107 (132)
235 PRK14170 bifunctional 5,10-met 20.8 2.4E+02 0.0052 28.9 6.2 43 342-384 11-62 (284)
236 TIGR01456 CECR5 HAD-superfamil 20.3 91 0.002 32.6 3.2 47 337-383 9-63 (321)
237 cd01019 ZnuA Zinc binding prot 20.1 2.5E+02 0.0055 28.7 6.4 52 332-383 197-252 (286)
No 1
>KOG0204|consensus
Probab=100.00 E-value=7.6e-124 Score=996.61 Aligned_cols=630 Identities=60% Similarity=0.947 Sum_probs=575.3
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccch---hhHHHHHHHHHHHHHHHHhhhhhhcc
Q psy11770 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE---EWKAIYFREFVRFFIVGVTVLVVAVP 83 (668)
Q Consensus 7 ~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~ilv~~iP 83 (668)
..+..+++||||-+|+++|.+|+++++.+++++++++++.|+...+...+. .|.......+.+.|+.+++++++|+|
T Consensus 319 l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~~~~~~~~~v~~f~i~VTilVVAVP 398 (1034)
T KOG0204|consen 319 LGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTWSDEYIQEFVKFFIIAVTILVVAVP 398 (1034)
T ss_pred hhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccccHHHHHHHHHHhhheeEEEEEECC
Confidence 344555789999999999999999999999999999999998877655433 56667788899999999999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCC-CCCCCCHHHH
Q psy11770 84 EGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIP-KYEDIPEDIA 162 (668)
Q Consensus 84 ~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~-~~~~~~~~~~ 162 (668)
||||+++|++++++++||++++.+||+++++|++|+.++||+|||||||+|+|+|++.|+++..++... +....++...
T Consensus 399 EGLPLAVTLsLAys~kkMmkD~~LVRhL~ACETMGsAT~ICsDKTGTLT~N~MtVV~~~~~~~~~k~~~~~~~~l~~~~~ 478 (1034)
T KOG0204|consen 399 EGLPLAVTLSLAYSMKKMMKDNNLVRHLDACETMGSATAICSDKTGTLTTNRMTVVQSYIGSEHYKVNSPKSSNLPPSLL 478 (1034)
T ss_pred CCccHHHHHHHHHHHHHHhcchhHHHHhHHHhhcCCceEEEecCcCceEeeeEEEEeeeeccccccccCcccccCCHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999998887433 3245788889
Q ss_pred HHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee
Q psy11770 163 SKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242 (668)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~ 242 (668)
+.+.++++.|++ ..+..++..+..+.+.|+|+|.||+.+..++|.+++..|. +.++.+.+||+|.||||+++++.
T Consensus 479 ~ll~~gI~~Nt~--g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG~~~~~~R~---e~~v~kv~~FNS~kK~~gvvi~~ 553 (1034)
T KOG0204|consen 479 DLLLQGIAQNTT--GSVVKPEKGGEQPEQLGSPTECALLGFGLKLGMDFQDVRP---EEKVVKVYPFNSVKKRMGVVIKL 553 (1034)
T ss_pred HHHHHHHhhcCC--CeEEecCCCCcCccccCCHHHHHHHHHHHHhCcchHhhcc---hhheeEEeccCcccceeeEEEEc
Confidence 999999998874 3566666666688999999999999999999999999884 45678999999999999999986
Q ss_pred -CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 243 -KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 243 -~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+++.++|+|||+|.++.+|+++++.+|+..+++++.+. .+++.++.|+++|||++|+|||++... ..+++
T Consensus 554 ~~~~~y~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~~~~-~~~~~Ie~mA~~~LRti~lAy~df~~~--------~~~~~ 624 (1034)
T KOG0204|consen 554 PDGGHYVHWKGASEIVLKSCEYYIDSNGELVPFNEDDRK-SFKDVIEPMASEGLRTICLAYRDFVAG--------PDEEP 624 (1034)
T ss_pred CCCCeEEEEcChHHHHHHhhhheECCCCCEeeCCHHHHH-HHHHHHHHHHHhhhheeeEEeeccccC--------CCCCC
Confidence 44413999999999999999999999999999998887 678999999999999999999997654 12334
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
++++++..+.+++++|++|++||+||+++++|+.|++|||.|.|+||||..||++||.+|||+.++++.++++|.++.+
T Consensus 625 ~~~~~~~~~~~lt~laivGIkDPvRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d~~~lEG~eFr~- 703 (1034)
T KOG0204|consen 625 SWDNEELPEGGLTLLAIVGIKDPVRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGDFLALEGKEFRE- 703 (1034)
T ss_pred CccccccCCCCeEEEEEeeccCCCCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCccceecchhhhh-
Confidence 4555566789999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
..+++.++++++.+|+||.+|.||..+|+.| +..+++|+++|||.||+|||++||||.|||+.|+++|
T Consensus 704 -------~s~ee~~~i~pkl~VlARSSP~DK~lLVk~L-----~~~g~VVAVTGDGTNDaPALkeADVGlAMGIaGTeVA 771 (1034)
T KOG0204|consen 704 -------LSQEERDKIWPKLRVLARSSPNDKHLLVKGL-----IKQGEVVAVTGDGTNDAPALKEADVGLAMGIAGTEVA 771 (1034)
T ss_pred -------cCHHHHHhhhhhheeeecCCCchHHHHHHHH-----HhcCcEEEEecCCCCCchhhhhcccchhccccchhhh
Confidence 4788999999999999999999999999997 4579999999999999999999999999999999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHh
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLAL 561 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l 561 (668)
|++||++++||||.+|++++.|||+.|.||+|+++|+++.|++.+++.|.+++..+.+|++++|+||+|++||.+.+++|
T Consensus 772 KEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~~~~dsPLtAVQlLWVNLIMDTLgALAL 851 (1034)
T KOG0204|consen 772 KEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSACATGDSPLTAVQLLWVNLIMDTLGALAL 851 (1034)
T ss_pred hhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhhhcCCccHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHH
Q psy11770 562 ATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLM 641 (668)
Q Consensus 562 ~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~ 641 (668)
++|||.+++|+|+|++|++++|++.||.++++|++||.+++|.+.|.|..+|+... +.+..+.+.+|++|++||+|
T Consensus 852 ATepPt~~Lm~RkP~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~----~~~~~~~~~nTiIFNtFV~~ 927 (1034)
T KOG0204|consen 852 ATEPPTDELMKRKPVGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNG----PLHSPPSVHNTIIFNTFVFC 927 (1034)
T ss_pred ccCCCChHHhcCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCC----CCCCchhhheeeehhHHHHH
Confidence 99999999999999999999999999999999999999999999999998886432 23445667889999999999
Q ss_pred HHHHHHHhhcccCCcccccccccCCCC
Q psy11770 642 TLFNEINARKIHGQRNVFEGLFTTHSV 668 (668)
Q Consensus 642 ~~~~~~~~r~~~~~~~~~~~~~~n~~~ 668 (668)
|+||.+|+|+.+ ++|+|+|+++|++|
T Consensus 928 qvFNEinaRki~-~~NvFkgi~~N~~F 953 (1034)
T KOG0204|consen 928 QVFNEINARKID-ERNVFKGIFRNRLF 953 (1034)
T ss_pred HHHHHHhhcchh-HHhHHHHHhcCceE
Confidence 999999999988 57999999999875
No 2
>KOG0202|consensus
Probab=100.00 E-value=4.7e-109 Score=884.44 Aligned_cols=635 Identities=33% Similarity=0.499 Sum_probs=507.7
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..+++++++||||+.+|+|+++++.+...+++.+.++-+.+|. .-..+..| +....++|..++++.++|
T Consensus 221 ~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~---~p~~~g~~----fk~~~~~f~IaVsLAVAA 293 (972)
T KOG0202|consen 221 KIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL---DPVHGGSW----FKGALYYFKIAVSLAVAA 293 (972)
T ss_pred HHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc---cccccccc----hhchhhhhhHHHHHHHHh
Confidence 44555667788899999999999999997766666655544332221 01122333 345578899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCC---------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIP--------- 152 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~--------- 152 (668)
||||||+.+|+++++|.+||+|++++||+++++|+||.+++||+|||||||+|+|++.++|+.+..+....
T Consensus 294 IPEGLPaVvT~tLALG~~rMakknaIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~~~~~~~f~~tg~ty 373 (972)
T KOG0202|consen 294 IPEGLPAVVTTTLALGTRRMAKKNAIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGGTATVDEFNPTGTTY 373 (972)
T ss_pred ccCCCcchhhhhHHHhHHHHHhhhhhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccccccccccccCCcee
Confidence 99999999999999999999999999999999999999999999999999999999999998765332210
Q ss_pred --C-----------CCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhh--
Q psy11770 153 --K-----------YEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD-- 217 (668)
Q Consensus 153 --~-----------~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~-- 217 (668)
. ......+..+.+....+.|+... ...+.. +.+...|.|+|.||..++.+.|..-......
T Consensus 374 ~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~---v~~~~~-~~~~~~G~pTE~AL~vlaeKm~l~~~~~~~~s~ 449 (972)
T KOG0202|consen 374 SPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDAT---VEYNDA-DCYEKVGEPTEGALIVLAEKMGLPGTRSTNLSN 449 (972)
T ss_pred CCCCceEecCccccccccccHHHHHHHHHHHhhhhhh---hhcCch-hhHHhcCCchHHHHHHHHHHcCCCcchhhcccc
Confidence 0 00112233444555444444322 111122 5567799999999999999987654321111
Q ss_pred ---------CC-ccceeeeeccCCCCceEEEEEee-C--CeEEEEEcCchHHHHhhcccccccCC-ccccCCHHHHHHHH
Q psy11770 218 ---------LP-EEVFTRVYTFNSVRKSMSTVIPK-K--NGYRVYTKGASEIILKKCSYIYGRNG-HLEKFTKDMQGRLV 283 (668)
Q Consensus 218 ---------~~-~~~~~~~~~F~s~rk~msvvv~~-~--~~~~~~~KGa~e~il~~c~~~~~~~~-~~~~~~~~~~~~~~ 283 (668)
+. ..+...++||+|+||+|||.+.+ . .++.+|+|||+|.|+++|++++..+| ...++++..|+.+.
T Consensus 450 ~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~pLt~~~re~il 529 (972)
T KOG0202|consen 450 EEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKVPLTQASRETIL 529 (972)
T ss_pred cccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceeeeCcHHHHHHHH
Confidence 00 12335789999999999999986 2 35899999999999999999887776 45899999988865
Q ss_pred HHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEE
Q psy11770 284 RNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITI 363 (668)
Q Consensus 284 ~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v 363 (668)
+...+|+++|||+|++|+++.+...-+. . ...+...+...|+||+|+|++|+.||+|++++++|+.|+++||||
T Consensus 530 -~~~~~~g~~gLRvLalA~~~~~~~~~~~--~---~l~~~s~~~~~E~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV 603 (972)
T KOG0202|consen 530 -ANVYEMGSEGLRVLALASKDSPGQVPDD--Q---DLNDTSNRATAESDLTFVGLVGILDPPRPEVADAIELCRQAGIRV 603 (972)
T ss_pred -HHHHHHhhccceEEEEEccCCcccChhh--h---hhcccccccccccceEEEEEeeccCCCchhHHHHHHHHHHcCCEE
Confidence 6778899999999999999876410000 0 001122345678999999999999999999999999999999999
Q ss_pred EEEcCCCHHHHHHHHHHcCCccCCCc--eEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHH
Q psy11770 364 RMVTGDNINTARSIATKCGIVKPGED--YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMID 441 (668)
Q Consensus 364 ~~~TGd~~~ta~~ia~~~gi~~~~~~--~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~ 441 (668)
.|+|||+..||.+||+++|+...+.+ .-.++|.+++++ .++.++....+..+|+|++|++|.+||+.|
T Consensus 604 ~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~l--------s~~~~~~~~~~~~vFaR~~P~HK~kIVeaL-- 673 (972)
T KOG0202|consen 604 IMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDL--------SDEELDDAVRRVLVFARAEPQHKLKIVEAL-- 673 (972)
T ss_pred EEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcC--------CHHHHHHHhhcceEEEecCchhHHHHHHHH--
Confidence 99999999999999999999776553 347889888864 567777888889999999999999999997
Q ss_pred hhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 442 SKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTV 521 (668)
Q Consensus 442 ~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~ 521 (668)
|..|+.|+|+|||+||+|+||.||||||||++|++++|+|||+|+.||||+.|..+++|||.+|+|+++++.|.++.
T Consensus 674 ---q~~geivAMTGDGVNDApALK~AdIGIAMG~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSs 750 (972)
T KOG0202|consen 674 ---QSRGEVVAMTGDGVNDAPALKKADIGIAMGISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSS 750 (972)
T ss_pred ---HhcCCEEEecCCCccchhhhhhcccceeecCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhh
Confidence 67899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHH
Q psy11770 522 NVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVI 601 (668)
Q Consensus 522 n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~ 601 (668)
|+..+...++...++.+.|++|+|+||+|+++|.+|+.+|+.+||++|+|++|||+.++++++.+.+++++..|+|..+.
T Consensus 751 nVgev~~I~l~aa~~~p~pL~pvQiLWiNlvtDG~PA~aLG~ep~D~DiM~kpPR~~~~~iit~~l~~r~l~~g~~vg~~ 830 (972)
T KOG0202|consen 751 NVGEVVLIFLTAAFGIPEPLIPVQILWINLVTDGPPATALGFEPVDPDIMKKPPRDSKDGIITGWLIFRYLAIGIIVGVA 830 (972)
T ss_pred hHHHHHHHHHHHHhCCCCcccchhhheeeeeccCCchhhcCCCCCChhHHhCCCCCCCCCeeeHHHHHHHHHhheeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999887654
Q ss_pred HHHHHHhhccccCCCCCCCCC--CC-------------CcccchhhHHHHHHHHHHHHHHHHhhcccCCcccc-cccccC
Q psy11770 602 IFGILFFGDKLLDIPTGRGAE--YG-------------SLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVF-EGLFTT 665 (668)
Q Consensus 602 ~~~~~~~~~~~~~~~~~~~~~--~~-------------~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~-~~~~~n 665 (668)
..+.+.+-....+-.-.+.+. |. .+.....||+|+.||+...||.++||+... ++| .++|+|
T Consensus 831 Tv~~f~~~~~~~~~~vt~~~~~~~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~--slf~~~~~~N 908 (972)
T KOG0202|consen 831 TVGVFVWWMYGADGKVTYRQLAHYNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENK--SLFTMPPWSN 908 (972)
T ss_pred EhHhhhHHHhcCCCCcChhhhcchhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCc--ceEEeccccc
Confidence 433322111100000000000 00 011234599999999999999999999764 566 499999
Q ss_pred CCC
Q psy11770 666 HSV 668 (668)
Q Consensus 666 ~~~ 668 (668)
+||
T Consensus 909 ~~l 911 (972)
T KOG0202|consen 909 RWL 911 (972)
T ss_pred HHH
Confidence 986
No 3
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.5e-99 Score=878.15 Aligned_cols=603 Identities=35% Similarity=0.509 Sum_probs=498.7
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+....+......||||++++++.+.+.+++++++++++++... ..+.+| ...++.++++++++
T Consensus 246 ~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~--------~~~~~~--------~~~~~~~v~l~va~ 309 (917)
T COG0474 246 KIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF--------RGGNGL--------LESFLTALALAVAA 309 (917)
T ss_pred HHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------hcCccH--------HHHHHHHHHHHHhc
Confidence 55666667767899999999999999999988888777665421 112225 67899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcC-EEEecCCCCCCCCHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCE-VQYKNIPKYEDIPED 160 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~-~~~~~~~~~~~~~~~ 160 (668)
||+|||+.++++++.++.+|++++++||+++++|+||++++||||||||||+|+|+|+++++.+ ..... +. .....+
T Consensus 310 IPegLp~~vti~la~g~~~mak~~~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~~~~~~-~~-~~~~~~ 387 (917)
T COG0474 310 VPEGLPAVVTIALALGAQRMAKDNAIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGGGKDID-DK-DLKDSP 387 (917)
T ss_pred cccchHHHHHHHHHHHHHHHHhccchhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCCccccc-cc-ccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999984 11101 00 111122
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC--ChHHHhhhCCccceeeeeccCCCCceEEE
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK--NYQTVRDDLPEEVFTRVYTFNSVRKSMST 238 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~--~~~~~~~~~~~~~~~~~~~F~s~rk~msv 238 (668)
....+...+++||+... ..+ + ++..|||+|.|+++++.+.|. +....+..+ .+++++||+|+|||||+
T Consensus 388 ~~~~~l~~~~lc~~~~~----~~~-~--~~~~gdptE~Al~~~a~~~~~~~~~~~~~~~~---~~~~~~PFdS~rKrMsv 457 (917)
T COG0474 388 ALLRFLLAAALCNSVTP----EKN-G--WYQAGDPTEGALVEFAEKLGFSLDLSGLEVEY---PILAEIPFDSERKRMSV 457 (917)
T ss_pred HHHHHHHHHHhcCcccc----ccc-C--ceecCCccHHHHHHHHHhcCCcCCHHHHhhhc---ceeEEecCCCCceEEEE
Confidence 22345555566665431 112 2 788999999999999999887 555555444 45899999999999999
Q ss_pred EEee-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhccc
Q psy11770 239 VIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHI 317 (668)
Q Consensus 239 vv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~ 317 (668)
+++. ++++.+++|||||+|+++|+.. ++..+++++.++. +.+..++|+++|||||++|||.++.++.
T Consensus 458 iv~~~~~~~~~~~KGApe~il~~~~~~----~~~~~~~~~~~~~-~~~~~~~la~~glRvla~A~k~~~~~~~------- 525 (917)
T COG0474 458 IVKTDEGKYILFVKGAPEVILERCKSI----GELEPLTEEGLRT-LEEAVKELASEGLRVLAVAYKKLDRAEK------- 525 (917)
T ss_pred EEEcCCCcEEEEEcCChHHHHHHhccc----CcccccCHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCcccc-------
Confidence 9985 5669999999999999999975 6667777777766 4688999999999999999997654321
Q ss_pred CCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh
Q psy11770 318 EGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397 (668)
Q Consensus 318 ~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~ 397 (668)
....+..|+||+|+|+++++||+|++++++|+.|+++||++||+||||.+||++||++||+.......++++|.+
T Consensus 526 -----~~~~~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aIa~~~Gi~~~~~~~~vi~G~e 600 (917)
T COG0474 526 -----DDEVDEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECGIEAEAESALVIDGAE 600 (917)
T ss_pred -----cchhhhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHcCCCCCCCceeEeehHH
Confidence 011156789999999999999999999999999999999999999999999999999999865433256899999
Q ss_pred HHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc
Q psy11770 398 FNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG 477 (668)
Q Consensus 398 ~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~ 477 (668)
+... .++++.+.+.+..||||++|+||.++|+.+ |..|++|+|+|||+||+||||+||||||||++|
T Consensus 601 l~~l--------~~~el~~~~~~~~VfARvsP~qK~~IV~~l-----q~~g~vVamtGDGvNDapALk~ADVGIamg~~G 667 (917)
T COG0474 601 LDAL--------SDEELAELVEELSVFARVSPEQKARIVEAL-----QKSGHVVAMTGDGVNDAPALKAADVGIAMGGEG 667 (917)
T ss_pred hhhc--------CHHHHHHHhhhCcEEEEcCHHHHHHHHHHH-----HhCCCEEEEeCCCchhHHHHHhcCccEEecccH
Confidence 9865 455677777778899999999999999997 567999999999999999999999999999889
Q ss_pred cHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CchhHHHHHHHHHHHhHH
Q psy11770 478 TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQD-SPLKAVQMLWVNLIMDTL 556 (668)
Q Consensus 478 ~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~-~~l~~~~~l~~n~~~~~~ 556 (668)
+|++|++||+++.+++|..+..+++|||++|.|+++++.|.+++|+..+++.+++.+++.+ .|++++|++|+|+++|++
T Consensus 668 tdaak~Aadivl~dd~~~~i~~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~~~p~~~~qll~inll~d~~ 747 (917)
T COG0474 668 TDAAKEAADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLFFLPLTPLQLLWINLLTDSL 747 (917)
T ss_pred HHHHHhhcceEeecCcHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999888888776 899999999999999999
Q ss_pred HHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCC-cccchhhHHH
Q psy11770 557 ASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGS-LPTQHFTIIF 635 (668)
Q Consensus 557 ~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~t~~f 635 (668)
|+++++.++|+.++|+++|+++++++++++.+++|++...++.++++++.|........... .... ......|++|
T Consensus 748 pa~~L~~~~~~~~~m~~~~~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~~~~t~~f 824 (917)
T COG0474 748 PALALGVEDPESDVMKRPPRGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANT---LGLDLFQALLQTTAF 824 (917)
T ss_pred hhheeecCCCcccccccCCCCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc---cchhhHHHHHHHHHH
Confidence 99999999999999999999999999999999998888777776666555543322211111 0001 1345789999
Q ss_pred HHHHHHHHHHHHHhhcccCCccccc-ccccCCC
Q psy11770 636 NTFVLMTLFNEINARKIHGQRNVFE-GLFTTHS 667 (668)
Q Consensus 636 ~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~ 667 (668)
.+++++|+++.+.+|+.+. +++. ++++|++
T Consensus 825 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~n~~ 855 (917)
T COG0474 825 TVLVLIQLLLTLAVRSRGR--PFLSSLLFSNKY 855 (917)
T ss_pred HHHHHHHHHHHHHHhcccc--chhhcccccCHH
Confidence 9999999999999998643 4554 4566654
No 4
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=100.00 E-value=3.9e-97 Score=871.23 Aligned_cols=626 Identities=54% Similarity=0.811 Sum_probs=510.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.++.+ ++||+|++++++++++.++++++++++++++++.+.+.... .+..........+...+..++++++++
T Consensus 260 ki~~~~~~~~-~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~al~llv~~ 337 (941)
T TIGR01517 260 KLMMELRAEG-EDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIR-GDGRDTEEDAQTFLDHFIIAVTIVVVA 337 (941)
T ss_pred HHHHhhccCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcc-ccccccchhhHHHHHHHHHHHHHHHhh
Confidence 4455555554 56899999999999999988888877776654432222110 010000001124567889999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||+++|++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+..+.........++..
T Consensus 338 iP~~Lp~~vti~l~~~~~~mak~~ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 417 (941)
T TIGR01517 338 VPEGLPLAVTIALAYSMKKMMKDNNLVRHLAACETMGSATAICSDKTGTLTQNVMSVVQGYIGEQRFNVRDVLRNVPKHV 417 (941)
T ss_pred CCCchHHHHHHHHHHHHHHHHhCCCEEechHHhhhccCceEEEEcCcCceeeceEEEEEEEEecceEecCcccccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998765443221111122334
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+..++.+|+.+... . +.....+..|||+|.|+++++.+.|.+....+..+ +.++.+||+|+||||+++++
T Consensus 418 ~~~l~~~~~~~s~~~~~---~-~~~~~~~~~g~p~e~All~~~~~~~~~~~~~~~~~---~~~~~~pF~s~~k~msvv~~ 490 (941)
T TIGR01517 418 RNILVEGISLNSSSEEV---V-DRGGKRAFIGSKTECALLGFLLLLGRDYQEVRAEE---KVVKIYPFNSERKFMSVVVK 490 (941)
T ss_pred HHHHHHHHHhCCCCccc---c-CCCCccccCCCccHHHHHHHHHHcCCCHHHHHhhc---hhccccccCCCCCeEEEEEE
Confidence 44555666666654211 0 11122356799999999999988887766555443 34678999999999999998
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. ++++++++|||||.|+++|+.++..+|...++++ .+++ +++..++++++|+||+++|||.++.++..
T Consensus 491 ~~~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~-~~~~-i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~--------- 559 (941)
T TIGR01517 491 HSGGKVREFRKGASEIVLKPCRKRLDSNGEATPISD-DKDR-CADVIEPLASDALRTICLAYRDFAPEEFP--------- 559 (941)
T ss_pred eCCCcEEEEEECChHHHHHhhhHHhhcCCCcccCcH-HHHH-HHHHHHHHHhcCCEEEEEEEEecCccccc---------
Confidence 7 4568999999999999999987655677777765 4433 56788999999999999999988643211
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
..+..|+||+|+|+++++|++|++++++|+.|+++||+++|+|||++.||.++|+++||..++. .+++|.++..
T Consensus 560 ----~~~~~e~~l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~--~vi~G~~~~~ 633 (941)
T TIGR01517 560 ----RKDYPNGGLTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGG--LAMEGKEFRR 633 (941)
T ss_pred ----cccccccCcEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCc--eEeeHHHhhh
Confidence 1123478999999999999999999999999999999999999999999999999999975543 5789998875
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ .++.+++...+..+|||++|+||.++|+.+ |..|++|+|+|||.||+|||++||||||||.+|++.
T Consensus 634 l--------~~~el~~~i~~~~Vfar~sPe~K~~iV~~l-----q~~g~vVam~GDGvNDapALk~AdVGIAmg~~gtdv 700 (941)
T TIGR01517 634 L--------VYEEMDPILPKLRVLARSSPLDKQLLVLML-----KDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTEV 700 (941)
T ss_pred C--------CHHHHHHHhccCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCCCchHHHHHhCCcceecCCCccHH
Confidence 4 456677788888999999999999999997 557899999999999999999999999999889999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
|+++||+++.+++|..|.+++++||++|.|+++++.|.+++|+..+++.+++.+++.++|++++|++|+|+++|++|+++
T Consensus 701 Ak~aADivL~dd~f~~I~~~i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~~~~pl~~~qil~inl~~d~~~al~ 780 (941)
T TIGR01517 701 AKEASDIILLDDNFASIVRAVKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCISSTSPLTAVQLLWVNLIMDTLAALA 780 (941)
T ss_pred HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHhhHHH
Confidence 99999999999999999999999999999999999999999999999999988888899999999999999999999999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.++|++++|++||+.++++++++.+|.+|++++++++++.+++++++..+++...+..... .....++|++|++|++
T Consensus 781 l~~e~~~~~lm~~~P~~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~f~~~v~ 859 (941)
T TIGR01517 781 LATEPPTEALLDRKPIGRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITS-HQQGELNTIVFNTFVL 859 (941)
T ss_pred HccCCccHHHHhCCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccc-cccchhhHHHHHHHHH
Confidence 999999999999999999999999999999999999999988887776655554332110000 1134678999999999
Q ss_pred HHHHHHHHhhcccCCcccccccccCCCC
Q psy11770 641 MTLFNEINARKIHGQRNVFEGLFTTHSV 668 (668)
Q Consensus 641 ~~~~~~~~~r~~~~~~~~~~~~~~n~~~ 668 (668)
+|+||.+++|+.+. .++|+++++|+++
T Consensus 860 ~~~~~~~~~r~~~~-~~~~~~~~~n~~~ 886 (941)
T TIGR01517 860 LQLFNEINARKLYE-RNVFEGLFKNRIF 886 (941)
T ss_pred HHHHHHHHHccCCc-ccccccccccHHH
Confidence 99999999998763 4788899999864
No 5
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=100.00 E-value=1.2e-95 Score=855.43 Aligned_cols=634 Identities=31% Similarity=0.456 Sum_probs=502.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.++.+.++.++||+|+++++++..++.+.++++++++++++..+. .. ..+..|. ..+...+..++++++++
T Consensus 178 ki~~~~~~~~~~~t~lq~~l~~~~~~l~~~~~~~~~i~~~~~~~~~~--~~-~~~~~~~----~~~~~~~~~~i~l~v~~ 250 (917)
T TIGR01116 178 KIRDEMRAAEQEDTPLQKKLDEFGELLSKVIGLICILVWVINIGHFN--DP-ALGGGWI----QGAIYYFKIAVALAVAA 250 (917)
T ss_pred HHHHHhhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cc-cccchhH----HHHHHHHHHHHhhhhhc
Confidence 56677778888899999999999999988777776665544322110 00 0112232 23456677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE------EecCCC-C
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ------YKNIPK-Y 154 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~------~~~~~~-~ 154 (668)
||||||++++++++.++++|+++|++||+++++|+||++|+||||||||||+|+|+|.+++..+.. +..... .
T Consensus 251 iP~~Lp~~vti~l~~~~~~m~~~~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 330 (917)
T TIGR01116 251 IPEGLPAVITTCLALGTRKMAKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330 (917)
T ss_pred cccccHHHHHHHHHHHHHHHHHCCcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCcc
Confidence 999999999999999999999999999999999999999999999999999999999999886531 111000 0
Q ss_pred CC-------------CCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhh----
Q psy11770 155 ED-------------IPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDD---- 217 (668)
Q Consensus 155 ~~-------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~---- 217 (668)
+. ...+..+.+....+.|+.... . .++.+..+...|||+|.|+++++.+.|.+....+..
T Consensus 331 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~lc~~~~~--~-~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~ 407 (917)
T TIGR01116 331 APEGGVIKDDGPVAGGQDAGLEELATIAALCNDSSL--D-FNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRR 407 (917)
T ss_pred CCCccccccCCcccccchHHHHHHHHHHHhcCCCee--e-ccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccc
Confidence 00 011223445555566654321 1 111111233469999999999999888664432110
Q ss_pred ---------CCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHH
Q psy11770 218 ---------LPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIE 288 (668)
Q Consensus 218 ---------~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (668)
...+..++++||||+|||||++++.++++.+|+|||||.|+++|++++.++|...+++++.++++ ++.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~pF~s~rK~msviv~~~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i-~~~~~ 486 (917)
T TIGR01116 408 PALGCNSVWNDKFKKLATLEFSRDRKSMSVLCKPSTGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTI-LSVIK 486 (917)
T ss_pred cccchhHHHHhhcceeeecccChhhCeEEEEEeeCCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHH-HHHHH
Confidence 11234678899999999999999987889999999999999999988776688888888877664 57789
Q ss_pred HHhh-hcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEc
Q psy11770 289 PMAC-DGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVT 367 (668)
Q Consensus 289 ~~~~-~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~T 367 (668)
+|++ +|+|||++|||.++.++.... ..+....+.+|+||+|+|+++++||+|++++++|+.|+++||+++|+|
T Consensus 487 ~~a~~~GlRvl~~A~k~~~~~~~~~~------~~~~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miT 560 (917)
T TIGR01116 487 EMGTTKALRCLALAFKDIPDPREEDL------LSDPANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMIT 560 (917)
T ss_pred HHHhhcCCeEEEEEEEECCccccccc------cccchhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEec
Confidence 9999 999999999999865321110 001112356789999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHcCCccCCCce--EEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcC
Q psy11770 368 GDNINTARSIATKCGIVKPGEDY--LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS 445 (668)
Q Consensus 368 Gd~~~ta~~ia~~~gi~~~~~~~--i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~ 445 (668)
||+.+||.++|+++|+..++.+. ..++|.++..+ .++...+...+..+|||++|+||.++|+.+ |
T Consensus 561 GD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~--------~~~~~~~~~~~~~v~ar~~P~~K~~iV~~l-----q 627 (917)
T TIGR01116 561 GDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEM--------GPAKQRAACRSAVLFSRVEPSHKSELVELL-----Q 627 (917)
T ss_pred CCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhC--------CHHHHHHhhhcCeEEEecCHHHHHHHHHHH-----H
Confidence 99999999999999998655432 46788877643 334556666778899999999999999986 5
Q ss_pred CCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 446 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVA 525 (668)
Q Consensus 446 ~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~ 525 (668)
..+++|+|+|||.||+|||++|||||||| +|++.+|++||+++.+|+|..+.++++|||++|.|+++++.|.+++|+..
T Consensus 628 ~~g~~va~iGDG~ND~~alk~AdVGia~g-~g~~~ak~aAD~vl~dd~f~~i~~~i~~GR~~~~ni~k~i~~~l~~ni~~ 706 (917)
T TIGR01116 628 EQGEIVAMTGDGVNDAPALKKADIGIAMG-SGTEVAKEASDMVLADDNFATIVAAVEEGRAIYNNMKQFIRYMISSNIGE 706 (917)
T ss_pred hcCCeEEEecCCcchHHHHHhCCeeEECC-CCcHHHHHhcCeEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHH
Confidence 57899999999999999999999999999 99999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11770 526 VIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGI 605 (668)
Q Consensus 526 ~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (668)
+++.+++.+++.+.|++++|++|+|+++|++|+++++.++|++++|++||+.+++++++++++++|++.+++++++.++.
T Consensus 707 ~~~~~~~~~~~~~~pl~~~qll~inli~d~lp~~~l~~~~~~~~~m~~pP~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~ 786 (917)
T TIGR01116 707 VVCIFLTAALGIPEGLIPVQLLWVNLVTDGLPATALGFNPPDKDIMWKPPRRPDEPLITGWLFFRYLVVGVYVGLATVGG 786 (917)
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHhcCCcchhHhcCCCCCCCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888889999999999999999999999999999999999999999999999999999999999999875544
Q ss_pred HHhhccccCCCC-------CCC-CCC-----CCcccchhhHHHHHHHHHHHHHHHHhhcccCCccccc-ccccCCCC
Q psy11770 606 LFFGDKLLDIPT-------GRG-AEY-----GSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTTHSV 668 (668)
Q Consensus 606 ~~~~~~~~~~~~-------~~~-~~~-----~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~~ 668 (668)
+++.....+... +.. .+. ......++|++|++|+++|+||.|+||+.+ .++|. ++|+|+++
T Consensus 787 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~ 861 (917)
T TIGR01116 787 FVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLVVIEMFNALNALSED--QSLLRMPPWVNKWL 861 (917)
T ss_pred HHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHcCCc--ccccccCCccCHHH
Confidence 433211111100 000 000 002346789999999999999999999964 47786 78899864
No 6
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=100.00 E-value=1.6e-95 Score=856.82 Aligned_cols=600 Identities=29% Similarity=0.441 Sum_probs=472.9
Q ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccCchHHHHHHH
Q psy11770 14 KSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGLPLAVTLS 93 (668)
Q Consensus 14 ~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~~Lp~~~~~~ 93 (668)
+||||++++++++.++.++++++++++++.. + ..| ...++++++++++++|+|||++++++
T Consensus 272 ~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~-------~----~~~--------~~~~~~av~l~Va~VPegLp~~vti~ 332 (1053)
T TIGR01523 272 GTPLHRKLSKLAVILFCIAIIFAIIVMAAHK-------F----DVD--------KEVAIYAICLAISIIPESLIAVLSIT 332 (1053)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHh-------h----hhh--------HHHHHHHHHHHHHHcccchHHHHHHH
Confidence 5999999999999988887777766554211 0 011 34567789999999999999999999
Q ss_pred HHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCE-EEecC-------CC--C---------
Q psy11770 94 LAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEV-QYKNI-------PK--Y--------- 154 (668)
Q Consensus 94 l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~-~~~~~-------~~--~--------- 154 (668)
++++++||+++|++||+++++|+||++++||+|||||||+|+|+|+++|..+. .+... +. .
T Consensus 333 La~g~~rMak~~~lVr~L~avEtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 412 (1053)
T TIGR01523 333 MAMGAANMSKRNVIVRKLDALEALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSP 412 (1053)
T ss_pred HHHHHHHHHhcCCEeccchhhhhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCccccccccccccc
Confidence 99999999999999999999999999999999999999999999999998641 22110 00 0
Q ss_pred ---------------------C--C-C---CHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHc
Q psy11770 155 ---------------------E--D-I---PEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAI 207 (668)
Q Consensus 155 ---------------------~--~-~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~ 207 (668)
. + . ..+..+.+.....+|+... .. .++.+..+...|||+|.||+.++.+.
T Consensus 413 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~lcn~a~--~~-~~~~~~~~~~~GdptE~ALl~~a~~~ 489 (1053)
T TIGR01523 413 YEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIAT--VF-KDDATDCWKAHGDPTEIAIHVFAKKF 489 (1053)
T ss_pred ccccccccccccccccccccccccccccccccHHHHHHHHHHHhccCCe--ee-ccCCCCceeeCcCccHHHHHHHHHHc
Confidence 0 0 0 0012233455444454322 11 11112234567999999999999988
Q ss_pred CCChH------HHhhh----------------CCccceeeeeccCCCCceEEEEEeeC-C-eEEEEEcCchHHHHhhccc
Q psy11770 208 GKNYQ------TVRDD----------------LPEEVFTRVYTFNSVRKSMSTVIPKK-N-GYRVYTKGASEIILKKCSY 263 (668)
Q Consensus 208 g~~~~------~~~~~----------------~~~~~~~~~~~F~s~rk~msvvv~~~-~-~~~~~~KGa~e~il~~c~~ 263 (668)
|.+.. ..+.. ...+..++++||+|+||||+++++++ + ++++|+|||||.|+++|+.
T Consensus 490 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~ 569 (1053)
T TIGR01523 490 DLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSS 569 (1053)
T ss_pred CCCcccccchhhhhhhccccccccccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhH
Confidence 86421 12111 11245688999999999999999863 3 5889999999999999997
Q ss_pred ccccCC-ccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeec
Q psy11770 264 IYGRNG-HLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIE 342 (668)
Q Consensus 264 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~ 342 (668)
....+| +..+++++.++++ .+..++|+++|+|||++|||.++.++...+ ..+. ....++.+|+||+|+|+++++
T Consensus 570 ~~~~~~~~~~~l~~~~~~~i-~~~~~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~--~~~~~~~~e~~L~~~G~~~~~ 644 (1053)
T TIGR01523 570 SNGKDGVKISPLEDCDRELI-IANMESLAAEGLRVLAFASKSFDKADNNDD--QLKN--ETLNRATAESDLEFLGLIGIY 644 (1053)
T ss_pred hhcCCCCccccCCHHHHHHH-HHHHHHHHhcCCeEEEEEEEECCchhccch--hhhc--cccchhhhccCCEEEEEEeee
Confidence 655444 5677888877664 577899999999999999999875432111 0000 011234578999999999999
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC--------ceEEeehhhHHHhhhcCchhhhHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE--------DYLILEGKEFNRRVRDNNGEVQQNLL 414 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~--------~~i~~~g~~~~~~~~~~~~~~~~~~l 414 (668)
||+|++++++|+.|+++||++||+|||++.||.++|+++||..++. ...+++|.++..+ .++.+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~~~~~~~~~~~vitG~~l~~l--------~~~~l 716 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPNFIHDRDEIMDSMVMTGSQFDAL--------SDEEV 716 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCccccccccccccceeeehHHhhhc--------CHHHH
Confidence 9999999999999999999999999999999999999999975421 2368899888754 34556
Q ss_pred hhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCc
Q psy11770 415 DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNF 494 (668)
Q Consensus 415 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~ 494 (668)
++...+..||||++|+||.++|+.+ |..|++|+|+|||.||+|||++||||||||.+|++.++++||+++.+++|
T Consensus 717 ~~~~~~~~V~ar~sP~~K~~iV~~l-----q~~g~~Vam~GDGvNDapaLk~AdVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 717 DDLKALCLVIARCAPQTKVKMIEAL-----HRRKAFCAMTGDGVNDSPSLKMANVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred HHHhhcCeEEEecCHHHHHHHHHHH-----HhcCCeeEEeCCCcchHHHHHhCCccEecCCCccHHHHHhcCEEEecCCH
Confidence 6667778899999999999999997 55689999999999999999999999999988999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc----C-CCchhHHHHHHHHHHHhHHHHHHhcccCCCcc
Q psy11770 495 SSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV----Q-DSPLKAVQMLWVNLIMDTLASLALATEMPTPD 569 (668)
Q Consensus 495 ~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~----~-~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~ 569 (668)
..|.+++.|||++|+|+++++.|.+++|+..+++.+++.++. . +.||+++|+||+|+++|.+|+++|+.|+|+++
T Consensus 792 ~~I~~~i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e~~~~~ 871 (1053)
T TIGR01523 792 ASILNAIEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLEKAAPD 871 (1053)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccCCCChh
Confidence 999999999999999999999999999999999988887763 2 47899999999999999999999999999999
Q ss_pred ccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccc--CC---C--CCCCCCCCCcccchhhHHHHHHHHHH
Q psy11770 570 LLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLL--DI---P--TGRGAEYGSLPTQHFTIIFNTFVLMT 642 (668)
Q Consensus 570 l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~--~~~~~~~~~~~~~~~t~~f~~~v~~~ 642 (668)
+|++||+.++++++++.++..++..+++++++.+..+++....+ +. . ..++.+. ....+++|++|.+++++|
T Consensus 872 ~m~~~Pr~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~a~t~~f~~l~~~~ 950 (1053)
T TIGR01523 872 LMDRLPHDNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGC-NDVFKARSAAFATMTFCA 950 (1053)
T ss_pred HHhcCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccc-cchhhhHHHHHHHHHHHH
Confidence 99999999999999999999999999988776665443211100 00 0 0000000 023467899999999999
Q ss_pred HHHHHHhhcccC
Q psy11770 643 LFNEINARKIHG 654 (668)
Q Consensus 643 ~~~~~~~r~~~~ 654 (668)
++|.|+||+.+.
T Consensus 951 ~~~~~~~r~~~~ 962 (1053)
T TIGR01523 951 LILAVEVKDFDN 962 (1053)
T ss_pred HHHHHHHhcCch
Confidence 999999998754
No 7
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=100.00 E-value=1.3e-94 Score=851.80 Aligned_cols=623 Identities=28% Similarity=0.395 Sum_probs=490.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.+++|+|+.+++++..+..+++++++++++++.. .+..| ...+.+++++++++
T Consensus 243 ~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--------~~~~~~~i~v~v~~ 305 (997)
T TIGR01106 243 RIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLI---------LGYTW--------LEAVIFLIGIIVAN 305 (997)
T ss_pred HHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------hcCCH--------HHHHHHHHHHHhhc
Confidence 44555666777789999999999999988877766655443321 12344 45677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCC------C
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY------E 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------~ 155 (668)
||||||++++++++.++++|+++|++||+++++|+||++++||||||||||+|+|+|.++++++..+...... .
T Consensus 306 iP~~L~~~v~i~l~~~~~~m~~~~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 385 (997)
T TIGR01106 306 VPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTEDQSGVSF 385 (997)
T ss_pred CCccchHHHHHHHHHHHHHHHHCCcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEEEECCeEEecCCccCCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999999988766532110 0
Q ss_pred CCCHHHHHHHHHHHhhcCCCCcccccCCCC--CCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCC
Q psy11770 156 DIPEDIASKIVEGISVNSGYTSKIMAPENA--NELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR 233 (668)
Q Consensus 156 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~r 233 (668)
..+....+.+...+++|+.... ....+. ...++..|||+|.|+++++.+.+.+....+..++ .+.++||+|+|
T Consensus 386 ~~~~~~~~~ll~~~alcn~~~~--~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~~~~~~~~~---~v~~~pF~s~r 460 (997)
T TIGR01106 386 DKSSATWLALSRIAGLCNRAVF--KAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNP---KVVEIPFNSTN 460 (997)
T ss_pred CcccHHHHHHHHHHHHcCCCee--ccccCCCcccccccCcChHHHHHHHHHHHhCCCHHHHHhhCc---eeEEeccCCCC
Confidence 1111233345556666654321 111000 0123567999999999999876665555555443 47789999999
Q ss_pred ceEEEEEee----CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccch
Q psy11770 234 KSMSTVIPK----KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDK 309 (668)
Q Consensus 234 k~msvvv~~----~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~ 309 (668)
|||++++.. ++++++|+|||||.|+++|++++ .+|+..+++++.++. +++..++|+++|+||+++|||.++.++
T Consensus 461 K~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~-~~g~~~~l~~~~~~~-~~~~~~~~a~~GlRvla~A~k~l~~~~ 538 (997)
T TIGR01106 461 KYQLSIHENEDPRDPRHLLVMKGAPERILERCSSIL-IHGKEQPLDEELKEA-FQNAYLELGGLGERVLGFCHLYLPDEQ 538 (997)
T ss_pred ceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHh-cCCCcccCCHHHHHH-HHHHHHHHHhcCCEEEEEEEeecCccc
Confidence 999998863 24688999999999999999876 467778888877665 467889999999999999999987543
Q ss_pred hhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc
Q psy11770 310 AEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED 389 (668)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 389 (668)
+.... .++ .++.+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.+|.++|+++|++.++..
T Consensus 539 ~~~~~-~~~----~~~~~~~e~~L~flGli~i~Dplr~~v~~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~ 613 (997)
T TIGR01106 539 FPEGF-QFD----TDDVNFPTDNLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE 613 (997)
T ss_pred ccccc-ccc----chhhhccccCcEEEEEEeccCCChHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc
Confidence 21100 000 0111234889999999999999999999999999999999999999999999999999999754321
Q ss_pred ----------------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCCc--EEEEecCHhhHHHHHHHHHHhhcC
Q psy11770 390 ----------------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL--RVLARSSPSDKYTLVKGMIDSKIS 445 (668)
Q Consensus 390 ----------------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~--~v~~r~~p~~K~~iv~~l~~~~~~ 445 (668)
..+++|.+++.+ .++.+++...+. .||||++|+||.++|+.+ |
T Consensus 614 ~~~~i~~~~~~~~~~~~~~~~~~~vi~G~~l~~l--------~~~el~~~~~~~~~~VfaR~sPeqK~~IV~~l-----q 680 (997)
T TIGR01106 614 TVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDM--------TSEQLDEILKYHTEIVFARTSPQQKLIIVEGC-----Q 680 (997)
T ss_pred chhhhhhhccccccccccccccceEEEhHHhhhC--------CHHHHHHHHHhcCCEEEEECCHHHHHHHHHHH-----H
Confidence 257888888754 334555555543 499999999999999997 5
Q ss_pred CCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 446 AGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVA 525 (668)
Q Consensus 446 ~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~ 525 (668)
..|++|+|+|||.||+||||+||||||||.+|++.++++||+++.+|+|+.+.++++|||++|.|+++++.|.+++|+..
T Consensus 681 ~~g~vv~~~GDG~ND~paLk~AdVGiamg~~G~~vak~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~ 760 (997)
T TIGR01106 681 RQGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPE 760 (997)
T ss_pred HCCCEEEEECCCcccHHHHhhCCcceecCCcccHHHHHhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 67899999999999999999999999999779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCC-CCCCCCHHHHHHHHH-HHHHHHHHHH
Q psy11770 526 VIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGR-TKALISKTMMKNIIG-QAIYQLVIIF 603 (668)
Q Consensus 526 ~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~ 603 (668)
+++.+++.++..++|++++|++|+|+++|++|+++++.|+|++++|+++|+.+ .++++++.++..+++ .+++++++.|
T Consensus 761 ~~~~~~~~~~~~~~pl~~~qlL~inli~d~lp~~al~~e~~~~~~m~~~P~~~~~~~l~~~~~~~~~~~~~g~~~~~~~~ 840 (997)
T TIGR01106 761 ITPFLIFIIANIPLPLGTITILCIDLGTDMVPAISLAYEKAESDIMKRQPRNPKTDKLVNERLISMAYGQIGMIQALGGF 840 (997)
T ss_pred HHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHhcCCCCcccccCCCcCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999874 678999988877654 4777776665
Q ss_pred HHHHhhcc--------ccCCCCCC------------CCCCCCc-----ccchhhHHHHHHHHHHHHHHHHhhcccCCccc
Q psy11770 604 GILFFGDK--------LLDIPTGR------------GAEYGSL-----PTQHFTIIFNTFVLMTLFNEINARKIHGQRNV 658 (668)
Q Consensus 604 ~~~~~~~~--------~~~~~~~~------------~~~~~~~-----~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~ 658 (668)
+.+++... .+++...+ +..+... ...++|++|.+++++|+||.++||+.+ .++
T Consensus 841 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~--~~~ 918 (997)
T TIGR01106 841 FTYFVILAENGFLPLHLVGLRVQWDDRWINDLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRR--NSV 918 (997)
T ss_pred HHHHHHHhhcCCccccccccccccccccccccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCc--ccc
Confidence 54443211 11110000 0000000 014689999999999999999999854 377
Q ss_pred ccccccCCCC
Q psy11770 659 FEGLFTTHSV 668 (668)
Q Consensus 659 ~~~~~~n~~~ 668 (668)
|++.++|+++
T Consensus 919 f~~~~~n~~l 928 (997)
T TIGR01106 919 FQQGMKNKIL 928 (997)
T ss_pred cccCCcCHHH
Confidence 8655888753
No 8
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=100.00 E-value=2.3e-91 Score=817.48 Aligned_cols=585 Identities=32% Similarity=0.525 Sum_probs=482.1
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.++||+|+.++++++++..++++++++++++. ++ .+.+| ...+..++++++++
T Consensus 223 ki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~--~~-------~~~~~--------~~~~~~~v~llv~a 285 (884)
T TIGR01522 223 AVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVG--WF-------QGKDW--------LEMFTISVSLAVAA 285 (884)
T ss_pred HHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH--HH-------hcCCH--------HHHHHHHHHHHHHH
Confidence 455666777778999999999999998877665544333321 11 12334 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecC------CCCC
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI------PKYE 155 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------~~~~ 155 (668)
||||||+++|++++.+.+||+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+..+... +...
T Consensus 286 iP~~Lp~~vt~~l~~~~~r~ak~~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~~~~~~~~~~~~~~ 365 (884)
T TIGR01522 286 IPEGLPIIVTVTLALGVLRMSKKRAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGE 365 (884)
T ss_pred ccchHHHHHHHHHHHHHHHHhhcCCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceEeeccCCccCCCCc
Confidence 9999999999999999999999999999999999999999999999999999999999999866432110 0000
Q ss_pred ---------CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeee
Q psy11770 156 ---------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRV 226 (668)
Q Consensus 156 ---------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~ 226 (668)
.........++...+.|++... .. .+ ....|||+|.|+++++.+.|.+ ..+.. +..+++
T Consensus 366 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~---~~--~~--~~~~g~p~e~All~~~~~~~~~--~~~~~---~~~~~~ 433 (884)
T TIGR01522 366 VIVDGDVLHGFYTVAVSRILEAGNLCNNAKF---RN--EA--DTLLGNPTDVALIELLMKFGLD--DLRET---YIRVAE 433 (884)
T ss_pred ccccccccccccCHHHHHHHHHHhhhCCCee---cC--CC--CCcCCChHHHHHHHHHHHcCcH--hHHhh---CcEEeE
Confidence 0001112233333333433210 00 11 1245899999999999887653 22222 335788
Q ss_pred eccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEee
Q psy11770 227 YTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKD 304 (668)
Q Consensus 227 ~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~ 304 (668)
+||+|+||||+++++. ++++++++|||||.|+++|+.++..+|...+++++.+++ +++..++++++|+||+++||+.
T Consensus 434 ~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~-i~~~~~~~a~~G~rvl~~A~~~ 512 (884)
T TIGR01522 434 VPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDV-IQEEAAEMASAGLRVIAFASGP 512 (884)
T ss_pred eCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHH-HHHHHHHHHhcCCEEEEEEEEc
Confidence 9999999999999876 677899999999999999998876667777888776665 4577889999999999999986
Q ss_pred cccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 305 FVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 305 l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+ +++|+|+|+++++|++||+++++|+.|+++||+++|+|||+..||.++|+++|+.
T Consensus 513 ~------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 513 E------------------------KGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred C------------------------CCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCC
Confidence 4 2478999999999999999999999999999999999999999999999999997
Q ss_pred cCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHH
Q psy11770 385 KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPAL 464 (668)
Q Consensus 385 ~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~ml 464 (668)
...+. .++|.++... .++.+++.+.+..+|||++|+||.++|+.+ |..|+.|+|+|||.||+|||
T Consensus 569 ~~~~~--~v~g~~l~~~--------~~~~l~~~~~~~~Vfar~~P~~K~~iv~~l-----q~~g~~v~mvGDGvND~pAl 633 (884)
T TIGR01522 569 SKTSQ--SVSGEKLDAM--------DDQQLSQIVPKVAVFARASPEHKMKIVKAL-----QKRGDVVAMTGDGVNDAPAL 633 (884)
T ss_pred CCCCc--eeEhHHhHhC--------CHHHHHHHhhcCeEEEECCHHHHHHHHHHH-----HHCCCEEEEECCCcccHHHH
Confidence 65443 5688887653 456677778889999999999999999997 55689999999999999999
Q ss_pred hhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHH
Q psy11770 465 KKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV 544 (668)
Q Consensus 465 k~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~ 544 (668)
++|||||+||.+|++.++++||+++.+|+|..+.+++++||++|+|+++++.|.++.|+..+++.+++.+++.+.|++++
T Consensus 634 ~~AdVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~~~~pl~~~ 713 (884)
T TIGR01522 634 KLADIGVAMGQTGTDVAKEAADMILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLMGFPNPLNAM 713 (884)
T ss_pred HhCCeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCchhHH
Confidence 99999999996799999999999999999999999999999999999999999999999999888888888899999999
Q ss_pred HHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCC
Q psy11770 545 QMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYG 624 (668)
Q Consensus 545 ~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (668)
|++|+|+++|.+|+++++.|+|++++|++||++++++++++.++.+|++++++++++.++++++.. . .+
T Consensus 714 qiL~inl~~d~~~a~~l~~e~~~~~~m~~~P~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~--~---~~------ 782 (884)
T TIGR01522 714 QILWINILMDGPPAQSLGVEPVDKDVMRKPPRPRNDKILTKDLIKKILVSAIIIVVGTLFVFVREM--Q---DG------ 782 (884)
T ss_pred HHHHHHHHHHhhHHHHhccCCCChhHhhCCCCCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHH--c---CC------
Confidence 999999999999999999999999999999999999999999999999999998877665544321 1 11
Q ss_pred CcccchhhHHHHHHHHHHHHHHHHhhcccCCccccc-ccccCCCC
Q psy11770 625 SLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFE-GLFTTHSV 668 (668)
Q Consensus 625 ~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~-~~~~n~~~ 668 (668)
.....++|++|++|+++|+||.+++|+.+ .++|+ ++++|+++
T Consensus 783 ~~~~~~~t~~f~~~v~~q~~~~~~~r~~~--~~~~~~~~~~n~~~ 825 (884)
T TIGR01522 783 VITARDTTMTFTCFVFFDMFNALACRSQT--KSVFEIGFFSNRMF 825 (884)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHccCC--ccccccCcccCHHH
Confidence 01235689999999999999999999864 47786 78899864
No 9
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=100.00 E-value=2.3e-87 Score=779.69 Aligned_cols=559 Identities=21% Similarity=0.301 Sum_probs=446.4
Q ss_pred cccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhc
Q psy11770 3 PVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAV 82 (668)
Q Consensus 3 ~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~i 82 (668)
+.+..++ ++.+||+|++++++++.+..++.+++.+++++..+ ...+| ...+.+++++++++|
T Consensus 270 I~~~v~~-~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~---------~~~~~--------~~~l~~aisl~V~~~ 331 (903)
T PRK15122 270 LAKSIVG-TRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGF---------TKGDW--------LEALLFALAVAVGLT 331 (903)
T ss_pred HHHHhcC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhh---------ccCCH--------HHHHHHHHHHHHHHc
Confidence 4444444 55679999999999998887766555443332211 12234 567888999999999
Q ss_pred cCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHH
Q psy11770 83 PEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIA 162 (668)
Q Consensus 83 P~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~ 162 (668)
|||||++++++++.|+.+|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+. ..+++
T Consensus 332 Pe~Lp~~vt~~La~g~~~mak~~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V~~~~~~~~---------~~~~~-- 400 (903)
T PRK15122 332 PEMLPMIVSSNLAKGAIAMARRKVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIILEHHLDVSG---------RKDER-- 400 (903)
T ss_pred cchHHHHHHHHHHHHHHHHHHcCCeecccchhhhhcCCcEEEecCCcccccCeEEEEEEEcCCC---------CChHH--
Confidence 9999999999999999999999999999999999999999999999999999999998763221 01111
Q ss_pred HHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEee
Q psy11770 163 SKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPK 242 (668)
Q Consensus 163 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~ 242 (668)
+......|+.+ ....+||+|.|+++++.+.+.. ..+.. +...+++||+|.||+|+++++.
T Consensus 401 --~l~~a~l~s~~-------------~~~~~~p~e~All~~a~~~~~~--~~~~~---~~~~~~~pF~s~~k~ms~v~~~ 460 (903)
T PRK15122 401 --VLQLAWLNSFH-------------QSGMKNLMDQAVVAFAEGNPEI--VKPAG---YRKVDELPFDFVRRRLSVVVED 460 (903)
T ss_pred --HHHHHHHhCCC-------------CCCCCChHHHHHHHHHHHcCch--hhhhc---CceEEEeeeCCCcCEEEEEEEc
Confidence 22222222211 0125799999999999876542 11122 3346789999999999999987
Q ss_pred -CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 243 -KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 243 -~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++++++++|||||.++++|++... +|...+++++.++++ .+..++++++|+|++++|||.++.++...
T Consensus 461 ~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~i-~~~~~~~a~~G~rvlavA~k~~~~~~~~~--------- 529 (903)
T PRK15122 461 AQGQHLLICKGAVEEMLAVATHVRD-GDTVRPLDEARRERL-LALAEAYNADGFRVLLVATREIPGGESRA--------- 529 (903)
T ss_pred CCCcEEEEECCcHHHHHHhchhhhc-CCCeecCCHHHHHHH-HHHHHHHHhCCCEEEEEEEeccCcccccc---------
Confidence 677889999999999999997653 566677887766654 56788999999999999999876432100
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
..++..|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. + -+++|.++..+
T Consensus 530 --~~~~~~e~~l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~--~--~vi~G~el~~~ 603 (903)
T PRK15122 530 --QYSTADERDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEP--G--EPLLGTEIEAM 603 (903)
T ss_pred --ccccccccCcEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCC--C--CccchHhhhhC
Confidence 01123468999999999999999999999999999999999999999999999999999942 2 26788888754
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
+++.+.+...+..+|||++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.|
T Consensus 604 --------~~~el~~~v~~~~VfAr~sPe~K~~iV~~L-----q~~G~vVamtGDGvNDaPALk~ADVGIAmg-~gtdvA 669 (903)
T PRK15122 604 --------DDAALAREVEERTVFAKLTPLQKSRVLKAL-----QANGHTVGFLGDGINDAPALRDADVGISVD-SGADIA 669 (903)
T ss_pred --------CHHHHHHHhhhCCEEEEeCHHHHHHHHHHH-----HhCCCEEEEECCCchhHHHHHhCCEEEEeC-cccHHH
Confidence 556778888888999999999999999997 567999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHh
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLAL 561 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l 561 (668)
|++||+++.+|+|..|.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|+++.|++|+|+++|. |++++
T Consensus 670 keaADiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~~nli~D~-~~lal 748 (903)
T PRK15122 670 KESADIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLLQNLMYDI-SQLSL 748 (903)
T ss_pred HHhcCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHH-HHHhh
Confidence 99999999999999999999999999999999999999999998888777777766789999999999999995 99999
Q ss_pred cccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHH
Q psy11770 562 ATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLM 641 (668)
Q Consensus 562 ~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~ 641 (668)
+.|||++++| ++|++++++++++.++. +...+.+.++..|++.++.. .. +. . . .....+|+.|.+++++
T Consensus 749 ~~d~~~~~~m-~~P~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~---~~--~~-~--~-~~~~~~t~~f~~l~~~ 817 (903)
T PRK15122 749 PWDKMDKEFL-RKPRKWDAKNIGRFMLW-IGPTSSIFDITTFALMWFVF---AA--NS-V--E-MQALFQSGWFIEGLLS 817 (903)
T ss_pred cCCCCCHhhc-CCCCCCChhhhHHHHHH-HHHHHHHHHHHHHHHHHHHh---cc--Cc-H--h-hhhhhHHHHHHHHHHH
Confidence 9999999999 99999999999987664 22222223333333322211 10 10 0 0 0012357889999999
Q ss_pred HHHHHHHhhccc
Q psy11770 642 TLFNEINARKIH 653 (668)
Q Consensus 642 ~~~~~~~~r~~~ 653 (668)
|++|.|++|+.+
T Consensus 818 q~~~~~~~R~~~ 829 (903)
T PRK15122 818 QTLVVHMLRTQK 829 (903)
T ss_pred HHHHHHhhCcCC
Confidence 999999999864
No 10
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=100.00 E-value=4.5e-87 Score=775.87 Aligned_cols=559 Identities=22% Similarity=0.304 Sum_probs=441.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++.++||+|+.++++++.+..++++++.+++++... .+.+| ...+.+++++++++
T Consensus 270 kI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~---------~~~~~--------~~~l~~alsv~V~~ 332 (902)
T PRK10517 270 QLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGY---------TKGDW--------WEAALFALSVAVGL 332 (902)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHH---------hcCCH--------HHHHHHHHHHHHHH
Confidence 45566777778899999999999999888777666554433211 12234 46788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||++++++++.|+++|+|+|++||+++++|+||++|+||||||||||+|+|+|.++.... ..+.
T Consensus 333 ~Pe~LP~~vt~~la~g~~~mak~~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~~~----------~~~~-- 400 (902)
T PRK10517 333 TPEMLPMIVTSTLARGAVKLSKQKVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTDIS----------GKTS-- 400 (902)
T ss_pred cccHHHHHHHHHHHHHHHHHHhCCcEEecchhhhhccCCCEEEecCCCccccceEEEEEEecCC----------CCCH--
Confidence 9999999999999999999999999999999999999999999999999999999998764210 0111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+......|+.+. ...+||+|.|++.++...+ ....... +...+++||+|+||||+++++
T Consensus 401 -~~ll~~a~l~~~~~-------------~~~~~p~d~All~~a~~~~--~~~~~~~---~~~~~~~pFds~~k~msvvv~ 461 (902)
T PRK10517 401 -ERVLHSAWLNSHYQ-------------TGLKNLLDTAVLEGVDEES--ARSLASR---WQKIDEIPFDFERRRMSVVVA 461 (902)
T ss_pred -HHHHHHHHhcCCcC-------------CCCCCHHHHHHHHHHHhcc--hhhhhhc---CceEEEeeeCCCcceEEEEEE
Confidence 12233333333211 1247999999999886533 1112222 234678999999999999987
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. ++++.+++|||||.|+++|+.+.. +|...+++++.+++ +.+..++++++|+||+++|||+++.++.
T Consensus 462 ~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~-i~~~~~~~a~~G~rvlavA~k~~~~~~~---------- 529 (902)
T PRK10517 462 ENTEHHQLICKGALEEILNVCSQVRH-NGEIVPLDDIMLRR-IKRVTDTLNRQGLRVVAVATKYLPAREG---------- 529 (902)
T ss_pred ECCCeEEEEEeCchHHHHHhchhhhc-CCCeecCCHHHHHH-HHHHHHHHHhcCCEEEEEEEecCCcccc----------
Confidence 6 566889999999999999998754 56667788776665 4577889999999999999998764321
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
.. +...|+|++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||.. + -+++|.+++.
T Consensus 530 -~~--~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~--~--~v~~G~el~~ 602 (902)
T PRK10517 530 -DY--QRADESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKVCHEVGLDA--G--EVLIGSDIET 602 (902)
T ss_pred -cc--ccccccCceeeehHhhhCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCc--c--CceeHHHHHh
Confidence 00 111368999999999999999999999999999999999999999999999999999942 2 3678988875
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ +++.+++.+.+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.
T Consensus 603 l--------~~~el~~~~~~~~VfAr~sPe~K~~IV~~L-----q~~G~vVam~GDGvNDaPALk~ADVGIAmg-~gtdv 668 (902)
T PRK10517 603 L--------SDDELANLAERTTLFARLTPMHKERIVTLL-----KREGHVVGFMGDGINDAPALRAADIGISVD-GAVDI 668 (902)
T ss_pred C--------CHHHHHHHHhhCcEEEEcCHHHHHHHHHHH-----HHCCCEEEEECCCcchHHHHHhCCEEEEeC-CcCHH
Confidence 4 456778888888999999999999999997 567999999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
||++||+++.+++|..|.+++++||++|+|++|++.|.++.|+..++..+++.++..+.|++|.|+||+|+++| +|+++
T Consensus 669 AkeaADiVLldd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~~~~pl~~~qiL~inl~~D-~~~~a 747 (902)
T PRK10517 669 AREAADIILLEKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYD-VSQVA 747 (902)
T ss_pred HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHH-HhHHh
Confidence 99999999999999999999999999999999999999999999998888777776568999999999999999 78999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.|+|++++|++||+.. ... ....++..+++.+++.+..+++....++... + ......++..|.++++
T Consensus 748 l~~d~~~~~~m~~p~r~~-~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~F~~~~~ 816 (902)
T PRK10517 748 IPFDNVDDEQIQKPQRWN-PAD----LGRFMVFFGPISSIFDILTFCLMWWVFHANT----P--ETQTLFQSGWFVVGLL 816 (902)
T ss_pred hcCCCCChhhhcCCCCCC-HHH----HHHHHHHHHHHHHHHHHHHHHHHHHHccccc----h--hhHhHHHHHHHHHHHH
Confidence 999999999999988622 212 3333444555544433332222211111100 0 0001233456999999
Q ss_pred HHHHHHHHhhccc
Q psy11770 641 MTLFNEINARKIH 653 (668)
Q Consensus 641 ~~~~~~~~~r~~~ 653 (668)
+|+++.+++|+.+
T Consensus 817 ~q~~~~~~~R~~~ 829 (902)
T PRK10517 817 SQTLIVHMIRTRR 829 (902)
T ss_pred HHHHHHHhhccCC
Confidence 9999999999854
No 11
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=100.00 E-value=6.5e-86 Score=766.90 Aligned_cols=558 Identities=22% Similarity=0.295 Sum_probs=440.1
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++ +.++||+|+.++++++.+..+++++++++++++.+ .+.+| ...+.+++++++++
T Consensus 236 ki~~~v~~-~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~---------~~~~~--------~~~~~~al~l~v~~ 297 (867)
T TIGR01524 236 SLAIAATE-RRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGL---------MKGDW--------LEAFLFALAVAVGL 297 (867)
T ss_pred HHHHHhhC-CCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHH---------hcCCH--------HHHHHHHHHHHHHh
Confidence 45555666 66689999999999999988877766655443211 12234 46788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
||||||++++++++.++++|+|+|++||+++++|+||++|+||||||||||+|+|+|.+++..+. ...
T Consensus 298 iP~~Lp~~vt~~la~g~~~mak~~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~~~----------~~~-- 365 (867)
T TIGR01524 298 TPEMLPMIVSSNLAKGAINMSKKKVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDSSG----------ETS-- 365 (867)
T ss_pred CcchHHHHHHHHHHHHHHHHHhCCcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecCCC----------CCH--
Confidence 99999999999999999999999999999999999999999999999999999999998752111 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+.....+|+... ...+||.|.|+++++.+.. ....+.. +...+.+||+|+||||+++++
T Consensus 366 -~~~l~~a~l~~~~~-------------~~~~~p~~~Al~~~~~~~~--~~~~~~~---~~~~~~~pF~s~~k~ms~~v~ 426 (867)
T TIGR01524 366 -ERVLKMAWLNSYFQ-------------TGWKNVLDHAVLAKLDESA--ARQTASR---WKKVDEIPFDFDRRRLSVVVE 426 (867)
T ss_pred -HHHHHHHHHhCCCC-------------CCCCChHHHHHHHHHHhhc--hhhHhhc---CceEEEeccCCCcCEEEEEEE
Confidence 12222223332210 1135899999999886532 1122222 334678999999999999988
Q ss_pred e-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 242 K-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 242 ~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
+ ++.+++++|||||.++++|+.+.. +|...+++++.+++ +++..++++++|+|++++|||+++.++.+
T Consensus 427 ~~~~~~~~~~KGa~e~il~~c~~~~~-~~~~~~l~~~~~~~-i~~~~~~~a~~G~rvlavA~~~~~~~~~~--------- 495 (867)
T TIGR01524 427 NRAEVTRLICKGAVEEMLTVCTHKRF-GGAVVTLSESEKSE-LQDMTAEMNRQGIRVIAVATKTLKVGEAD--------- 495 (867)
T ss_pred cCCceEEEEEeCcHHHHHHhchhhhc-CCceecCCHHHHHH-HHHHHHHHHhcCCEEEEEEEeccCccccc---------
Confidence 6 345789999999999999987643 56667787776665 45778999999999999999987653210
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
. .+..|+||+|+|+++++||+|++++++|++|+++||+++|+|||++.||.++|+++||... -+++|.++..
T Consensus 496 --~--~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aIA~~lGI~~~----~v~~g~~l~~ 567 (867)
T TIGR01524 496 --F--TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARICQEVGIDAN----DFLLGADIEE 567 (867)
T ss_pred --c--cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCC----CeeecHhhhh
Confidence 0 1112679999999999999999999999999999999999999999999999999999532 2678888765
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
+ +++.+.+...+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++.
T Consensus 568 ~--------~~~el~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~vVam~GDGvNDapALk~AdVGIAmg-~gtdv 633 (867)
T TIGR01524 568 L--------SDEELARELRKYHIFARLTPMQKSRIIGLL-----KKAGHTVGFLGDGINDAPALRKADVGISVD-TAADI 633 (867)
T ss_pred C--------CHHHHHHHhhhCeEEEECCHHHHHHHHHHH-----HhCCCEEEEECCCcccHHHHHhCCEEEEeC-CccHH
Confidence 3 456677788888999999999999999997 567999999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA 560 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~ 560 (668)
||++||+++.+++|..|.+++++||++|+|+++++.|.++.|+..++..+++.++..+.|+++.|++|+|+++| +|+++
T Consensus 634 Ak~aADiVLldd~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~~~~~pl~~~qil~inl~~d-~~~~a 712 (867)
T TIGR01524 634 AKEASDIILLEKSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPMLSLHLLIQNLLYD-FSQLT 712 (867)
T ss_pred HHHhCCEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH-HHHHh
Confidence 99999999999999999999999999999999999999999999988888777776668999999999999999 79999
Q ss_pred hcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHH
Q psy11770 561 LATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVL 640 (668)
Q Consensus 561 l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~ 640 (668)
++.|+|++++|++||+ ++++. ....++..+++.+++.+..++.....+... + . ......+|..|.++++
T Consensus 713 l~~~~~~~~~m~~p~~-~~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~----~-~~~~~~~t~~f~~~~~ 781 (867)
T TIGR01524 713 LPWDKMDREFLKKPHQ-WEQKG----MGRFMLCIGPVSSIFDIATFLLMWFVFSAN-T----V-EEQALFQSGWFVVGLL 781 (867)
T ss_pred hcCCCCChHhhCCCCC-CChhh----HHHHHHHHHHHHHHHHHHHHHHHHHHhccc-c----h-hhhhHHHHHHHHHHHH
Confidence 9999999999976554 55543 333344455544433332222211111100 0 0 0011236888999999
Q ss_pred HHHHHHHHhhccc
Q psy11770 641 MTLFNEINARKIH 653 (668)
Q Consensus 641 ~~~~~~~~~r~~~ 653 (668)
+|++|.+++|+.+
T Consensus 782 ~~~~~~~~~R~~~ 794 (867)
T TIGR01524 782 SQTLVVHMIRTEK 794 (867)
T ss_pred HHHHHHHhhCcCC
Confidence 9999999999864
No 12
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=100.00 E-value=6.9e-86 Score=782.74 Aligned_cols=599 Identities=20% Similarity=0.254 Sum_probs=452.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+++.....++..+++++...++...+..+++++++++++. +. ..+.+| ...++.++++++++
T Consensus 347 ~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~----~~-----~~~~~~--------~~~~l~~l~iiv~~ 409 (1054)
T TIGR01657 347 QLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIE----LI-----KDGRPL--------GKIILRSLDIITIV 409 (1054)
T ss_pred HHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHH----HH-----HcCCcH--------HHHHHHHHHHHHhh
Confidence 45566666677789999999988776654443322221111 10 123344 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++++|+.||+|+|++|++++++|++|++|++|||||||||+|+|+|.+++..+..........+...+.
T Consensus 410 vP~~LP~~~ti~l~~~~~rL~k~~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~~~~~~~~~~~~~~~~~~~ 489 (1054)
T TIGR01657 410 VPPALPAELSIGINNSLARLKKKGIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQGLSGNQEFLKIVTEDSSLK 489 (1054)
T ss_pred cCchHHHHHHHHHHHHHHHHHHCCEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEecccCccccccccccccccC
Confidence 99999999999999999999999999999999999999999999999999999999999987543211000000000012
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCC-hH-HHhh----------hCCccceeeeecc
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKN-YQ-TVRD----------DLPEEVFTRVYTF 229 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~-~~-~~~~----------~~~~~~~~~~~~F 229 (668)
...+...++.||+... . ++ ...|||+|.|+++++...... .. .... ....+.+++++||
T Consensus 490 ~~~~~~~~a~C~~~~~--~----~~---~~~Gdp~E~al~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF 560 (1054)
T TIGR01657 490 PSITHKALATCHSLTK--L----EG---KLVGDPLDKKMFEATGWTLEEDDESAEPTSILAVVRTDDPPQELSIIRRFQF 560 (1054)
T ss_pred chHHHHHHHhCCeeEE--E----CC---EEecCHHHHHHHHhCCCEEECCCCcccccccccceeccCCCceEEEEEEEee
Confidence 2334556667765431 1 11 457999999999976321000 00 0000 0134567899999
Q ss_pred CCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeeccc
Q psy11770 230 NSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVT 307 (668)
Q Consensus 230 ~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~ 307 (668)
+|++|||||+++. ++++++|+|||||.|+++|+.. . . ++.+++.+++|+++|+|||++|||++++
T Consensus 561 ~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~----~----~-----p~~~~~~~~~~a~~G~RVLalA~k~l~~ 627 (1054)
T TIGR01657 561 SSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPE----T----V-----PSDYQEVLKSYTREGYRVLALAYKELPK 627 (1054)
T ss_pred cCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCc----C----C-----ChhHHHHHHHHHhcCCEEEEEEEeecCc
Confidence 9999999999987 3567899999999999999731 1 1 1225577899999999999999999864
Q ss_pred chhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC
Q psy11770 308 DKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG 387 (668)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~ 387 (668)
.+.+.. ...+++++|+||+|+|+++++|++||+++++|+.|+++||+++|+|||++.||.++|+++||+.++
T Consensus 628 ~~~~~~--------~~~~r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~iA~~~gii~~~ 699 (1054)
T TIGR01657 628 LTLQKA--------QDLSRDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPS 699 (1054)
T ss_pred cchhhh--------hhccHHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCC
Confidence 321110 012356789999999999999999999999999999999999999999999999999999997654
Q ss_pred Cce---------------------------------------------------EEeehhhHHHhhhcCchhhhHHHHhh
Q psy11770 388 EDY---------------------------------------------------LILEGKEFNRRVRDNNGEVQQNLLDK 416 (668)
Q Consensus 388 ~~~---------------------------------------------------i~~~g~~~~~~~~~~~~~~~~~~l~~ 416 (668)
+.. ++++|+++..... ..++.+.+
T Consensus 700 ~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~itG~~l~~l~~-----~~~~~l~~ 774 (1054)
T TIGR01657 700 NTLILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQA-----HSPELLLR 774 (1054)
T ss_pred ceEEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceEEEEEcHHHHHHHH-----hhHHHHHH
Confidence 322 3344444433211 13356777
Q ss_pred hcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 417 VWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 417 ~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
.+.+..||||++|+||.++|+.+ |..|+.|+|||||+||+||||+|||||||| ++ + |..+||+++.+++|++
T Consensus 775 ~~~~~~VfAR~sP~qK~~iV~~l-----q~~g~~V~m~GDG~ND~~ALK~AdVGIam~-~~-d-as~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 775 LLSHTTVFARMAPDQKETLVELL-----QKLDYTVGMCGDGANDCGALKQADVGISLS-EA-E-ASVAAPFTSKLASISC 846 (1054)
T ss_pred HHhcCeEEEecCHHHHHHHHHHH-----HhCCCeEEEEeCChHHHHHHHhcCcceeec-cc-c-ceeecccccCCCcHHH
Confidence 88888999999999999999997 667999999999999999999999999999 43 3 4589999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCC
Q psy11770 497 IVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPY 576 (668)
Q Consensus 497 i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~ 576 (668)
+.++|+|||+++.++++.+.|.+.+++...+..++ ++..++|++++|++|+|++++++++++++.++|.+++|+++|
T Consensus 847 I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~l~~~Q~l~i~li~~~~~~l~l~~~~p~~~l~~~~P- 923 (1054)
T TIGR01657 847 VPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI--LYLIGSNLGDGQFLTIDLLLIFPVALLMSRNKPLKKLSKERP- 923 (1054)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHccCcCccHHHHHHHHHHHHHHHHHHHcCCchhhcCCCCC-
Confidence 99999999999999999999999999887655443 334568999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccC
Q psy11770 577 GRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK--LLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHG 654 (668)
Q Consensus 577 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~ 654 (668)
.++++++.++.+++++++++.++.++.+++... |+.-......+....+...+|++| .++.+|.++.+.+++.+
T Consensus 924 --~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f-~~~~~~~~~~~~~~~~g- 999 (1054)
T TIGR01657 924 --PSNLFSVYILTSVLIQFVLHILSQVYLVFELHAQPWYKPENPVDLEKENFPNLLNTVLF-FVSSFQYLITAIVNSKG- 999 (1054)
T ss_pred --CccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCCcccccCccHHHHHHH-HHHHHHHHHheEEEcCC-
Confidence 468999999999999999999888776655432 211001100000112234579999 67777888888888753
Q ss_pred CcccccccccCCCC
Q psy11770 655 QRNVFEGLFTTHSV 668 (668)
Q Consensus 655 ~~~~~~~~~~n~~~ 668 (668)
.++.+++++|++|
T Consensus 1000 -~pf~~~~~~N~~~ 1012 (1054)
T TIGR01657 1000 -PPFREPIYKNKPF 1012 (1054)
T ss_pred -cchhhhHHHhHHH
Confidence 3666789999864
No 13
>KOG0203|consensus
Probab=100.00 E-value=2.9e-87 Score=715.01 Aligned_cols=618 Identities=29% Similarity=0.427 Sum_probs=498.7
Q ss_pred cccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccCch
Q psy11770 7 AEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPEGL 86 (668)
Q Consensus 7 ~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~~L 86 (668)
.-..+..+||++.+++++...+...++..++.+|++..+ .+.+| .+.+.+.+.++++.+|+||
T Consensus 270 ~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~---------~gy~~--------l~avv~~i~iivAnvPeGL 332 (1019)
T KOG0203|consen 270 ASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALI---------LGYEW--------LRAVVFLIGIIVANVPEGL 332 (1019)
T ss_pred hccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHh---------hcchh--------HHHhhhhheeEEecCcCCc
Confidence 334567799999999999999988888877776655432 24556 6677778899999999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCC------CCCCHH
Q psy11770 87 PLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKY------EDIPED 160 (668)
Q Consensus 87 p~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~------~~~~~~ 160 (668)
|..+|.+++...+||++++++||++.++|+||+.++||+|||||||+|+|+|.++|.++......... ....+.
T Consensus 333 ~~tvTv~LtltakrMa~Knc~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw~d~~i~~~d~~~~~~~~~~~~~~~ 412 (1019)
T KOG0203|consen 333 LATVTVCLTLTAKRMARKNCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLWFDNQIHEADTTEDQSGQSFDKSSA 412 (1019)
T ss_pred cceehhhHHHHHHHHhhceeEEeeeeheeecccceeEeecceeeEEecceEEEeeccCCceeeeechhhhhcccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999988755433211 111223
Q ss_pred HHHHHHHHHhhcCCCCcccccCCCCCC--CcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEE
Q psy11770 161 IASKIVEGISVNSGYTSKIMAPENANE--LPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMST 238 (668)
Q Consensus 161 ~~~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msv 238 (668)
....+......|+...- .+.+.+-+ .....|++.|.||++++....-+...+|+.++. +.+.||+|.+|+.-.
T Consensus 413 ~~~~l~r~~~lCn~a~~--~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~~~~~R~~~~k---v~eipfNSt~Kyqls 487 (1019)
T KOG0203|consen 413 TFIALSRIATLCNRAVF--KPGQDDVPVLKRDVAGDASEVALLKFIELILGSVMELRERNPK---VAEIPFNSTNKYQLS 487 (1019)
T ss_pred hHHHHHHHHHHhCccee--cccccCCceeeeeccCCHHHHHHHHHHHHhcchHHHHHHhhHH---hhcCCcccccceEEE
Confidence 34455666555554321 12222111 124579999999999998765555677776653 577899999999999
Q ss_pred EEeeC----CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhh
Q psy11770 239 VIPKK----NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQ 314 (668)
Q Consensus 239 vv~~~----~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~ 314 (668)
+++.+ .++.+.+|||||.++++|+.+.. +|+..+++++.++. +++..+++...|-||++|+++.++.+++....
T Consensus 488 ih~~~d~~~~~~~l~mKGape~il~~CSTi~i-~g~e~pld~~~~~~-f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~ 565 (1019)
T KOG0203|consen 488 IHETEDPSDPRFLLVMKGAPERILDRCSTILI-NGEEKPLDEKLKEA-FQEAYLELGGLGERVLGFCDLELPDEKFPRGF 565 (1019)
T ss_pred EEecCCCCCccceeeecCChHHHHhhccceee-cCCCCCcCHHHHHH-HHHHHHHhhhcchHHHHHHHHhcchhcCCCce
Confidence 98763 36889999999999999999875 68888898887766 56888999999999999999998876433211
Q ss_pred cccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc-----
Q psy11770 315 VHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED----- 389 (668)
Q Consensus 315 ~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~----- 389 (668)
...-+.. ..--.++.|+|++++-||+|..+++++.+||.+||+++|+|||++.||+++|++.||+..++.
T Consensus 566 ~f~~d~~-----n~p~~nl~FlGl~s~idPPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~et~e~~ 640 (1019)
T KOG0203|consen 566 QFDTDDV-----NFPTDNLRFLGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSETVEDI 640 (1019)
T ss_pred EeecCCC-----CCcchhccccchhhccCCCcccCchhhhhhhhhCceEEEEecCccchhhhhhhheeeecCCchhhhhh
Confidence 1111111 122358999999999999999999999999999999999999999999999999998764332
Q ss_pred -----------------eEEeehhhHHHhhhcCchhhhHHHHhhhcCC--cEEEEecCHhhHHHHHHHHHHhhcCCCCCE
Q psy11770 390 -----------------YLILEGKEFNRRVRDNNGEVQQNLLDKVWPR--LRVLARSSPSDKYTLVKGMIDSKISAGREV 450 (668)
Q Consensus 390 -----------------~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~--~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~ 450 (668)
..+++|.++.+ ++.+.+++++.+ -.||||.||+||..||+.. |+.|.+
T Consensus 641 a~r~~~~v~~vn~~~a~a~VihG~eL~~--------~~~~qld~il~nh~eIVFARTSPqQKLiIVe~c-----Qr~Gai 707 (1019)
T KOG0203|consen 641 AKRLNIPVEQVNSRDAKAAVIHGSELPD--------MSSEQLDELLQNHQEIVFARTSPQQKLIIVEGC-----QRQGAI 707 (1019)
T ss_pred HHhcCCcccccCccccceEEEecccccc--------cCHHHHHHHHHhCCceEEEecCccceEEeEhhh-----hhcCcE
Confidence 23444444433 345556655432 2589999999999999985 788999
Q ss_pred EEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 451 VAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 530 (668)
Q Consensus 451 v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 530 (668)
|+.+|||+||+||||.||||||||+.|++++|++||+++.||||.+|+..++|||.+|+|++|.+.|.++.|+..+.+.+
T Consensus 708 VaVTGDGVNDsPALKKADIGVAMGiaGSDvsKqAADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL 787 (1019)
T KOG0203|consen 708 VAVTGDGVNDSPALKKADIGVAMGIAGSDVSKQAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFL 787 (1019)
T ss_pred EEEeCCCcCCChhhcccccceeeccccchHHHhhcceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCC-CCCCCCCHHHHH-HHHHHHHHHHHHHHHHHHh
Q psy11770 531 IGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYG-RTKALISKTMMK-NIIGQAIYQLVIIFGILFF 608 (668)
Q Consensus 531 ~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 608 (668)
++.+++.|.|+..+++|++++.+|++|+++|++|+|+.|+|+|+||. +++.++|.+.+. .++..+++|++..|+.+|.
T Consensus 788 ~fi~~giPLplgtitIL~IDLgTDmvPAiSLAYE~aEsDIM~r~PR~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFv 867 (1019)
T KOG0203|consen 788 LFILFGIPLPLGTVTILCIDLGTDIVPAISLAYEKAESDIMLRPPRNPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFV 867 (1019)
T ss_pred HHHHhCCCcccchhhhhhhHhhcccchhhhHhccCchhhHHhcCCCCCcccccccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999996 788899987655 4555688888777654442
Q ss_pred ---hccc-----------------cCCCCCCCCCCCCcc-----cchhhHHHHHHHHHHHHHHHHhhcccCCcccccccc
Q psy11770 609 ---GDKL-----------------LDIPTGRGAEYGSLP-----TQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLF 663 (668)
Q Consensus 609 ---~~~~-----------------~~~~~~~~~~~~~~~-----~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~ 663 (668)
-..+ -++.+++++.|.++. ...+|..|.++|+.|+++++.|.+.+. ++|..-+
T Consensus 868 ima~nGf~P~~L~~ir~~W~d~~~~Dl~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRn--SlfqqGm 945 (1019)
T KOG0203|consen 868 IMAENGFLPRTLVGLREDWDDDGVNDLTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRN--SIFQQGM 945 (1019)
T ss_pred HHHHcCCChHHHHhhHHhhhhhhhhhhhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchh--HHHHhhh
Confidence 1111 134566677766543 335688999999999999999987554 7887668
Q ss_pred cCCCC
Q psy11770 664 TTHSV 668 (668)
Q Consensus 664 ~n~~~ 668 (668)
+|+.+
T Consensus 946 rN~vl 950 (1019)
T KOG0203|consen 946 RNKVL 950 (1019)
T ss_pred hhhhH
Confidence 99864
No 14
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=100.00 E-value=4.8e-84 Score=769.39 Aligned_cols=582 Identities=23% Similarity=0.292 Sum_probs=447.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHH-------HHHHHHHHHHHHH
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKA-------IYFREFVRFFIVG 74 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ 74 (668)
|+.+|...++.|+|++|+++|++...++.+.+++|++++++...+. .. .....|+. .....+...+..+
T Consensus 228 k~~~n~~~~~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~---~~-~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 303 (1057)
T TIGR01652 228 KLMRNATQAPSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWN---DA-HGKDLWYIRLDVSERNAAANGFFSFLTF 303 (1057)
T ss_pred hhhhcCCCCcccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhee---cc-cCCCccceecCcccccchhHHHHHHHHH
Confidence 5667888888999999999999999988877777766555432221 00 00112321 0112334567788
Q ss_pred HhhhhhhccCchHHHHHHHHHHHH------HHHhhC----CCcccCCchHHhhccccEEEcccccccccCceEEEEEEEc
Q psy11770 75 VTVLVVAVPEGLPLAVTLSLAYSV------KKMMKD----NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVC 144 (668)
Q Consensus 75 i~ilv~~iP~~Lp~~~~~~l~~~~------~~l~~~----~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~ 144 (668)
+.+++.++|++||+.++++...+. .+|.++ ++.||+++++|+||+|++||+|||||||+|+|++++++++
T Consensus 304 ~~L~~~~IPisL~v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~ 383 (1057)
T TIGR01652 304 LILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIA 383 (1057)
T ss_pred HHHHhhhcceeeeehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEEC
Confidence 899999999999999999999998 888875 4999999999999999999999999999999999999999
Q ss_pred CEEEecCCC---------CC-----------C-------------------CCHHHHHHHHHHHhhcCCCCcccccCCCC
Q psy11770 145 EVQYKNIPK---------YE-----------D-------------------IPEDIASKIVEGISVNSGYTSKIMAPENA 185 (668)
Q Consensus 145 ~~~~~~~~~---------~~-----------~-------------------~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 185 (668)
|..|..... .. . ...+....+..+++.||+..... ..++.
T Consensus 384 g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~-~~~~~ 462 (1057)
T TIGR01652 384 GVSYGDGFTEIKDAIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEF-NDDGP 462 (1057)
T ss_pred CEEecCCcchHHHHhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccc-cCCCC
Confidence 887753210 00 0 00111234566777777643210 01111
Q ss_pred CCCcccccChhHHHHHHHHHHcCCChHHHhh-----------hCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCc
Q psy11770 186 NELPKQVGNKTECALLGFVVAIGKNYQTVRD-----------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGA 253 (668)
Q Consensus 186 ~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~-----------~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa 253 (668)
....+..+||+|.|+++++...|..+..... ....+++++++||+|+||||||++++ ++++++|+|||
T Consensus 463 ~~~~y~~~sp~E~ALl~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~~~~~~l~~KGA 542 (1057)
T TIGR01652 463 EEITYQAASPDEAALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNPDGRIKLLCKGA 542 (1057)
T ss_pred CceEEEccCCcHHHHHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeCCCeEEEEEeCc
Confidence 1234667999999999999988865432111 11246778899999999999999998 55789999999
Q ss_pred hHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC-CCc-------
Q psy11770 254 SEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN-WDD------- 325 (668)
Q Consensus 254 ~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~-~~~------- 325 (668)
||+|+++|+.. +++.+ +...+++++|+++|+|||++|||.+++++++.|...+++... ..+
T Consensus 543 ~e~il~~~~~~----------~~~~~-~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~ 611 (1057)
T TIGR01652 543 DTVIFKRLSSG----------GNQVN-EETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDV 611 (1057)
T ss_pred HHHHHHHhhcc----------chhHH-HHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 99999999731 11222 235678899999999999999999998876655433321111 111
Q ss_pred -ccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeeh---------
Q psy11770 326 -ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG--------- 395 (668)
Q Consensus 326 -~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g--------- 395 (668)
.+++|+||+|+|+++++|++|++++++|+.|+++||++||+|||+.+||.++|++||++.++...+.+++
T Consensus 612 ~~~~iE~~L~~lG~~gieD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~~~~i~~~~~~~~~~~ 691 (1057)
T TIGR01652 612 VAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNMEQIVITSESLDATRSV 691 (1057)
T ss_pred HHHHHHhcCEEEEEEEEhhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCeEEEEecCchhhhHHH
Confidence 2458999999999999999999999999999999999999999999999999999999877665544444
Q ss_pred ------------------------------hhHHHhhhcCchhhhHHHHhhhcC--CcEEEEecCHhhHHHHHHHHHHhh
Q psy11770 396 ------------------------------KEFNRRVRDNNGEVQQNLLDKVWP--RLRVLARSSPSDKYTLVKGMIDSK 443 (668)
Q Consensus 396 ------------------------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~v~~r~~p~~K~~iv~~l~~~~ 443 (668)
+++.....+. ..+.+.++.. +..||||++|+||.++|+.+++
T Consensus 692 ~~~i~~~~~~~~~~~~~~~~~~~~~lvi~G~~l~~~l~~~----~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~-- 765 (1057)
T TIGR01652 692 EAAIKFGLEGTSEEFNNLGDSGNVALVIDGKSLGYALDEE----LEKEFLQLALKCKAVICCRVSPSQKADVVRLVKK-- 765 (1057)
T ss_pred HHHHHHHHHHHHHhhhhhccCCceEEEEccHHHHHHHhhH----HHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHh--
Confidence 3222211100 0112333333 3459999999999999999742
Q ss_pred cCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Q psy11770 444 ISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVN 522 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n 522 (668)
..+++|+|+|||+||++|||+|||||++.+....+|+++||+++. +|+.+.+++ .|||++|.|+++++.|.|++|
T Consensus 766 --~~~~~vl~iGDG~ND~~mlk~AdVGIgi~g~eg~qA~~aaD~~i~--~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn 841 (1057)
T TIGR01652 766 --STGKTTLAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIG--QFRFLTKLLLVHGRWSYKRISKMILYFFYKN 841 (1057)
T ss_pred --cCCCeEEEEeCCCccHHHHhhcCeeeEecChHHHHHHHhhhhhhh--hHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH
Confidence 238899999999999999999999998753333368999999998 699999997 899999999999999999999
Q ss_pred HHHHHHHHHHHhhcCC---CchhHHHHHHHHHHHhHHHHHHhcc--cCCCccccccCCC----CCCCCCCCHHHHHHHHH
Q psy11770 523 VVAVIVAFIGACAVQD---SPLKAVQMLWVNLIMDTLASLALAT--EMPTPDLLLRKPY----GRTKALISKTMMKNIIG 593 (668)
Q Consensus 523 ~~~~~~~~~~~~~~~~---~~l~~~~~l~~n~~~~~~~~l~l~~--~~~~~~l~~~~P~----~~~~~~~~~~~~~~~~~ 593 (668)
++.+++.+++.++..+ +++++++++|+|++++++|+++++. +++++++|.++|+ ++++++++.+.++.|++
T Consensus 842 ~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~ 921 (1057)
T TIGR01652 842 LIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWML 921 (1057)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHH
Confidence 9999999988876544 4678999999999999999999963 6778899999997 67788999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q psy11770 594 QAIYQLVIIFGILFFG 609 (668)
Q Consensus 594 ~~~~~~~~~~~~~~~~ 609 (668)
.|++|++++|++.++.
T Consensus 922 ~~~~~~~ii~~~~~~~ 937 (1057)
T TIGR01652 922 DGIYQSLVIFFFPMFA 937 (1057)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998876654
No 15
>PLN03190 aminophospholipid translocase; Provisional
Probab=100.00 E-value=2.9e-81 Score=737.55 Aligned_cols=584 Identities=20% Similarity=0.246 Sum_probs=442.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccch----hhHH---------------H
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDE----EWKA---------------I 62 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~---------------~ 62 (668)
|+.+|..+++.|.|++|+++|++...++.+.+++|+++.++...|..-. .+. +|+. .
T Consensus 310 K~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~----~~~~~yl~~~~~~~~~~~~~~~~~~~~ 385 (1178)
T PLN03190 310 KAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRH----RDELDTIPFYRRKDFSEGGPKNYNYYG 385 (1178)
T ss_pred hHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhccc----cccccccccccccccccccccccccch
Confidence 6778888888999999999999999998888888776665543332100 011 1110 0
Q ss_pred HHHHHHHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCC----------CcccCCchHHhhccccEEEcccccccc
Q psy11770 63 YFREFVRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN----------NLVRHLDACETMGNATAICSDKTGTLT 132 (668)
Q Consensus 63 ~~~~~~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~----------ilv~~~~~~e~lg~v~~i~~DKTGTLT 132 (668)
+.......+..++.++...||.+|++.+.++.......|.++. +.||+++.+|+||+|++||+|||||||
T Consensus 386 ~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGTLT 465 (1178)
T PLN03190 386 WGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLT 465 (1178)
T ss_pred hhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCccc
Confidence 0011123344556677799999999999999977677777665 679999999999999999999999999
Q ss_pred cCceEEEEEEEcCEEEecCCC--------------CC-------C-C------------C---HHHHHHHHHHHhhcCCC
Q psy11770 133 TNRMTAVQAYVCEVQYKNIPK--------------YE-------D-I------------P---EDIASKIVEGISVNSGY 175 (668)
Q Consensus 133 ~n~m~v~~~~~~~~~~~~~~~--------------~~-------~-~------------~---~~~~~~l~~~~~~~~~~ 175 (668)
+|+|+|++|+++|..|+.... .. . . . ......++.+++.||+.
T Consensus 466 ~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalChtv 545 (1178)
T PLN03190 466 ENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACNTI 545 (1178)
T ss_pred cceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcCCc
Confidence 999999999999887752100 00 0 0 0 01123466777778765
Q ss_pred CcccccCCCC---CCCcccccChhHHHHHHHHHHcCCChHHH---------hhhCCccceeeeeccCCCCceEEEEEee-
Q psy11770 176 TSKIMAPENA---NELPKQVGNKTECALLGFVVAIGKNYQTV---------RDDLPEEVFTRVYTFNSVRKSMSTVIPK- 242 (668)
Q Consensus 176 ~~~~~~~~~~---~~~~~~~g~p~e~al~~~~~~~g~~~~~~---------~~~~~~~~~~~~~~F~s~rk~msvvv~~- 242 (668)
........+. ....++.++|+|.||+.++.+.|..+... ......+++++++||+|+||||||+++.
T Consensus 546 ~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~~~ 625 (1178)
T PLN03190 546 VPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILGCP 625 (1178)
T ss_pred eeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEEcC
Confidence 3211011101 11236778999999999999998632211 1122346778999999999999999987
Q ss_pred CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC
Q psy11770 243 KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN 322 (668)
Q Consensus 243 ~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~ 322 (668)
++++.+|+|||||+|+++|+.... ++.+ +.+++++++|+++|+|||++|||++++++++.|...++....
T Consensus 626 ~~~~~l~~KGA~e~il~~~~~~~~---------~~~~-~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~ 695 (1178)
T PLN03190 626 DKTVKVFVKGADTSMFSVIDRSLN---------MNVI-RATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAAST 695 (1178)
T ss_pred CCcEEEEEecCcHHHHHhhccccc---------chhH-HHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhh
Confidence 567899999999999999974321 1112 235678899999999999999999988776655443322110
Q ss_pred -C--------CcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEe
Q psy11770 323 -W--------DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL 393 (668)
Q Consensus 323 -~--------~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~ 393 (668)
. .-.+++|+||+++|+++++|++|++++++|+.|+++||++||+|||+.+||.+||++|||+.++...+.+
T Consensus 696 ~~~~r~~~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~~i~i 775 (1178)
T PLN03190 696 ALIGRAALLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMTQIII 775 (1178)
T ss_pred hhhhhHHHHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCeeEEe
Confidence 0 1124679999999999999999999999999999999999999999999999999999998877655555
Q ss_pred ehh-----------------------------------------------hHHHhhhcCchhhhHHHHhhhcCC--cEEE
Q psy11770 394 EGK-----------------------------------------------EFNRRVRDNNGEVQQNLLDKVWPR--LRVL 424 (668)
Q Consensus 394 ~g~-----------------------------------------------~~~~~~~~~~~~~~~~~l~~~~~~--~~v~ 424 (668)
++. .+..... ....+.+.++..+ +.||
T Consensus 776 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~----~~~~~~f~~l~~~~~~VI~ 851 (1178)
T PLN03190 776 NSNSKESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLD----SELEEQLFQLASKCSVVLC 851 (1178)
T ss_pred cCCchhhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhh----hHHHHHHHHHHHhCCEEEE
Confidence 432 1111100 0011233344433 4489
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MW 503 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~ 503 (668)
||++|.||+++|+.+++ ..+++|+|||||+||++|||+|||||++.+....+|+.+|||.+. .|+.+.++| .|
T Consensus 852 cR~sP~QKa~IV~~vk~----~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~--~Fr~L~rLLlvH 925 (1178)
T PLN03190 852 CRVAPLQKAGIVALVKN----RTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMG--QFRFLVPLLLVH 925 (1178)
T ss_pred ecCCHHHHHHHHHHHHh----cCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchh--hhHHHHHHHHHh
Confidence 99999999999998753 236789999999999999999999997653444489999999999 899999997 59
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---hhHHHHHHHHHHHhHHHHHHhc--ccCCCccccccCCC--
Q psy11770 504 GRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSP---LKAVQMLWVNLIMDTLASLALA--TEMPTPDLLLRKPY-- 576 (668)
Q Consensus 504 gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~---l~~~~~l~~n~~~~~~~~l~l~--~~~~~~~l~~~~P~-- 576 (668)
||++|.|+.+.+.|.||+|++.+++++++.++.++++ +++|.+.+||++++++|+++++ ..+.+++.+.+.|.
T Consensus 926 Gr~~y~R~s~~i~y~fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY 1005 (1178)
T PLN03190 926 GHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLY 1005 (1178)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhh
Confidence 9999999999999999999999999999998887776 5789999999999999999875 44455666777783
Q ss_pred --CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy11770 577 --GRTKALISKTMMKNIIGQAIYQLVIIFGILFFG 609 (668)
Q Consensus 577 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 609 (668)
++++..++.+.|+.|++.|++|++++|++.++.
T Consensus 1006 ~~~~~~~~~n~~~F~~w~~~~i~qs~iiff~~~~~ 1040 (1178)
T PLN03190 1006 GAGQRQEAYNSKLFWLTMIDTLWQSAVVFFVPLFA 1040 (1178)
T ss_pred hhhccCCccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567789999999999999999999999877654
No 16
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=100.00 E-value=1.9e-79 Score=704.26 Aligned_cols=541 Identities=22% Similarity=0.345 Sum_probs=423.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++++++|+|+.+++++.++..+++++++++++++.. ..+.+| ...+.+++++++++
T Consensus 184 ~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~--------~~~~~~--------~~~~~~~i~vlv~a 247 (755)
T TIGR01647 184 KAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFF--------GRGESF--------REGLQFALVLLVGG 247 (755)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HcCCCH--------HHHHHHHHHHHHHh
Confidence 44556677777889999999999999888777766655443321 012334 56788899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||++++++++.+++||+|+|+++|+++++|+||++|+||||||||||+|+|+|.+++..+.. .+++
T Consensus 248 ~P~~Lp~~~~~~la~g~~r~ak~gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~---------~~~~- 317 (755)
T TIGR01647 248 IPIAMPAVLSVTMAVGAAELAKKKAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNG---------FDKD- 317 (755)
T ss_pred CCcchHHHHHHHHHHHHHHHHhCCeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCC---------CCHH-
Confidence 999999999999999999999999999999999999999999999999999999999999864310 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+..+..++. ...++|.|.|+++++.+.+ ..+.. ++..+.+||+|.+|+|+++++
T Consensus 318 -~~l~~a~~~~~----------------~~~~~pi~~Ai~~~~~~~~----~~~~~---~~~~~~~pf~~~~k~~~~~v~ 373 (755)
T TIGR01647 318 -DVLLYAALASR----------------EEDQDAIDTAVLGSAKDLK----EARDG---YKVLEFVPFDPVDKRTEATVE 373 (755)
T ss_pred -HHHHHHHHhCC----------------CCCCChHHHHHHHHHHHhH----HHHhc---CceEEEeccCCCCCeEEEEEE
Confidence 12222222221 1135899999999876532 11222 345678999999999999987
Q ss_pred e--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCC
Q psy11770 242 K--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEG 319 (668)
Q Consensus 242 ~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~ 319 (668)
. +++.++++||+||.++++|+.. ++.++ .+++.+++++++|+|++++|||+
T Consensus 374 ~~~~g~~~~~~kGa~e~il~~c~~~-----------~~~~~-~~~~~~~~~~~~G~rvl~vA~~~--------------- 426 (755)
T TIGR01647 374 DPETGKRFKVTKGAPQVILDLCDNK-----------KEIEE-KVEEKVDELASRGYRALGVARTD--------------- 426 (755)
T ss_pred eCCCceEEEEEeCChHHHHHhcCCc-----------HHHHH-HHHHHHHHHHhCCCEEEEEEEEc---------------
Confidence 6 3667889999999999999731 12222 24567789999999999999973
Q ss_pred CCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH
Q psy11770 320 DPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN 399 (668)
Q Consensus 320 ~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~ 399 (668)
.|++++|+|+++++||+||+++++|++|+++||+++|+|||++.||.++|+++||... +++++++.
T Consensus 427 ---------~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~~lGI~~~-----~~~~~~l~ 492 (755)
T TIGR01647 427 ---------EEGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTN-----IYTADVLL 492 (755)
T ss_pred ---------CCCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC-----CcCHHHhc
Confidence 0368899999999999999999999999999999999999999999999999999532 23444432
Q ss_pred HhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH
Q psy11770 400 RRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 479 (668)
Q Consensus 400 ~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~ 479 (668)
.. ++....+++.+++...+..+|+|++|+||.++|+.+ |..|++|+|+|||.||+|||++|||||||| +|++
T Consensus 493 ~~--~~~~~~~~~~~~~~~~~~~vfAr~~Pe~K~~iV~~l-----q~~G~~VamvGDGvNDapAL~~AdVGIAm~-~gtd 564 (755)
T TIGR01647 493 KG--DNRDDLPSGELGEMVEDADGFAEVFPEHKYEIVEIL-----QKRGHLVGMTGDGVNDAPALKKADVGIAVA-GATD 564 (755)
T ss_pred CC--cchhhCCHHHHHHHHHhCCEEEecCHHHHHHHHHHH-----HhcCCEEEEEcCCcccHHHHHhCCeeEEec-CCcH
Confidence 11 111234556677788888999999999999999997 567999999999999999999999999999 8999
Q ss_pred HHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHH
Q psy11770 480 VAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 559 (668)
Q Consensus 480 ~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l 559 (668)
.||++||+++.+++|..+.+++++||++|+|+++++.|.++.|+..+++.+++.++.. .|++|+|++|+|++.|. |++
T Consensus 565 vAkeaADivLl~d~l~~I~~ai~~gR~~~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~-~~l~~~~il~~~l~~d~-~~~ 642 (755)
T TIGR01647 565 AARSAADIVLTEPGLSVIVDAILESRKIFQRMKSYVIYRIAETIRIVFFFGLLILILN-FYFPPIMVVIIAILNDG-TIM 642 (755)
T ss_pred HHHHhCCEEEEcCChHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhC-cchhHHHHHHHHHHHhH-hHh
Confidence 9999999999999999999999999999999999999999999998877766554333 45999999999999996 699
Q ss_pred HhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccCCCCCCCCCCCCcccchhhHHHHHH
Q psy11770 560 ALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDK-LLDIPTGRGAEYGSLPTQHFTIIFNTF 638 (668)
Q Consensus 560 ~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~t~~f~~~ 638 (668)
++++|++++. ++| ++..+ ...+..++..|++.++..|.++++... .+..... ..+......+|++|.++
T Consensus 643 ~l~~~~~~~~---~~p---~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~t~~f~~~ 712 (755)
T TIGR01647 643 TIAYDNVKPS---KLP---QRWNL-REVFTMSTVLGIYLVISTFLLLAIALDTSFFIDKF---GLQLLHGNLQSLIYLQV 712 (755)
T ss_pred hccCCCCCCC---CCC---Cccch-HHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhcc---cccccHhhhHHHHHHHH
Confidence 9999998742 333 33333 366666777888887766665554431 0000000 00111235789999999
Q ss_pred HHHHHHHHHHhhccc
Q psy11770 639 VLMTLFNEINARKIH 653 (668)
Q Consensus 639 v~~~~~~~~~~r~~~ 653 (668)
++.|+++.+++|+.+
T Consensus 713 ~~~~~~~~~~~r~~~ 727 (755)
T TIGR01647 713 SISGQATIFVTRTHG 727 (755)
T ss_pred HHHHHHHHheeccCC
Confidence 999999999999864
No 17
>KOG0206|consensus
Probab=100.00 E-value=4.8e-76 Score=669.72 Aligned_cols=588 Identities=21% Similarity=0.269 Sum_probs=454.5
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHH---HHHHHHHHHHHHHhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAI---YFREFVRFFIVGVTVL 78 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i~il 78 (668)
|.-+|...++.|+|++++.+|+....++.+.+.++++..+...++..... ......|+.. ........+..++.++
T Consensus 257 K~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~t~~il~ 335 (1151)
T KOG0206|consen 257 KLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDG-RHNGEWWYLSPSEAAYAGFVHFLTFIILY 335 (1151)
T ss_pred hHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecc-cccCchhhhcCchHHHHHHHHHHHHHhhh
Confidence 67788899999999999999999888877766666555444333221000 0001122211 1223355667778889
Q ss_pred hhhccCchHHHHHHHHHHHHH------HHhh----CCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEE
Q psy11770 79 VVAVPEGLPLAVTLSLAYSVK------KMMK----DNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQY 148 (668)
Q Consensus 79 v~~iP~~Lp~~~~~~l~~~~~------~l~~----~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~ 148 (668)
...+|.+|...+.+.-..... .|.. ..+.+|+.+..|+||+|++|++|||||||+|.|++++|.++|..|
T Consensus 336 ~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F~kCsi~g~~y 415 (1151)
T KOG0206|consen 336 QYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEFKKCSINGTSY 415 (1151)
T ss_pred hceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeeeecccccCccc
Confidence 999999998877776655442 3332 246799999999999999999999999999999999999999888
Q ss_pred ecCCCC--------C--------------------------CCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccC
Q psy11770 149 KNIPKY--------E--------------------------DIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGN 194 (668)
Q Consensus 149 ~~~~~~--------~--------------------------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 194 (668)
...... . ....+..+.+..++++||+...... ++.....+++.+
T Consensus 416 g~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~--~~~~~~~Y~A~S 493 (1151)
T KOG0206|consen 416 GRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKD--EDSGKLSYEAES 493 (1151)
T ss_pred ccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccC--CCccceeeecCC
Confidence 643110 0 0112234567778888887542211 122256789999
Q ss_pred hhHHHHHHHHHHcCCChHHHhh---------hCCccceeeeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccc
Q psy11770 195 KTECALLGFVVAIGKNYQTVRD---------DLPEEVFTRVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 195 p~e~al~~~~~~~g~~~~~~~~---------~~~~~~~~~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~ 264 (668)
|+|.|++..|++.|..+..... ....++++...||+|.|||||||++. ++++.+|||||+.+|.++++.
T Consensus 494 PDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p~g~i~LycKGADsvI~erL~~- 572 (1151)
T KOG0206|consen 494 PDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDPDGRILLYCKGADSVIFERLSK- 572 (1151)
T ss_pred CcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcCCCcEEEEEcCcchhhHhhhhh-
Confidence 9999999999999876532211 11246788999999999999999999 669999999999999999974
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCC-CCc--------ccccccCeEE
Q psy11770 265 YGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPN-WDD--------ESNIVSHLTC 335 (668)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~-~~~--------~~~~e~~l~~ 335 (668)
++ +...+...+++++|+.+|+||||+|||++++++++.|.+.+.+... ..+ .+.+|+||++
T Consensus 573 ---~~-------~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~L 642 (1151)
T KOG0206|consen 573 ---NG-------EKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLIL 642 (1151)
T ss_pred ---cc-------hHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchh
Confidence 11 1122335678999999999999999999999999998877643332 222 2568999999
Q ss_pred EEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh------HHH---------
Q psy11770 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE------FNR--------- 400 (668)
Q Consensus 336 lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~------~~~--------- 400 (668)
+|.+++||+++++++++|+.|++||||+||+|||+.+||.+|+..|+++.++...+.++... ...
T Consensus 643 LGATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 643 LGATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMKLIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred hcceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCceEEEEecCChhhhcchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998877776665422 000
Q ss_pred -hh----h----c--C-c------hh-----hhH---HHH--hhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEE
Q psy11770 401 -RV----R----D--N-N------GE-----VQQ---NLL--DKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVA 452 (668)
Q Consensus 401 -~~----~----~--~-~------~~-----~~~---~~l--~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~ 452 (668)
.. . + . + +. ..+ ..+ -....+..+|||++|.||+.+|+..+ +..+..++
T Consensus 723 ~~~~~~~~~~~~~~~~~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk----~~~~~~TL 798 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSEKPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVK----KGLKAVTL 798 (1151)
T ss_pred HhhhHHHHHHhhccCcCCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHH----hcCCceEE
Confidence 00 0 0 0 0 00 000 011 11224567999999999999999873 45788999
Q ss_pred EEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 453 VTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVNVVAVIVAFI 531 (668)
Q Consensus 453 ~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 531 (668)
+||||+||++|+++|||||++++.+..+|..+||+.+. .|+.+.+++ .|||++|.|+.+++.|+||+|+...+..|+
T Consensus 799 AIGDGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIa--qFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fw 876 (1151)
T KOG0206|consen 799 AIGDGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIA--QFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFW 876 (1151)
T ss_pred EeeCCCccchheeeCCcCeeeccchhhhhhhcccchHH--HHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888899999999999 899999986 799999999999999999999999999999
Q ss_pred HHhhcCCCc---hhHHHHHHHHHHHhHHHHHHhc--ccCCCccccccCCC----CCCCCCCCHHHHHHHHHHHHHHHHHH
Q psy11770 532 GACAVQDSP---LKAVQMLWVNLIMDTLASLALA--TEMPTPDLLLRKPY----GRTKALISKTMMKNIIGQAIYQLVII 602 (668)
Q Consensus 532 ~~~~~~~~~---l~~~~~l~~n~~~~~~~~l~l~--~~~~~~~l~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 602 (668)
+.++.+++. +.+|++.++|++++++|++.+| ..+.+.+.+.+.|. +++...++++.|+.|+..+++|++++
T Consensus 877 y~f~~gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~ 956 (1151)
T KOG0206|consen 877 YQFFNGFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVI 956 (1151)
T ss_pred hhhcCCCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheee
Confidence 998876653 6889999999999999999887 44566677777773 66778999999999999999999999
Q ss_pred HHHHHhh
Q psy11770 603 FGILFFG 609 (668)
Q Consensus 603 ~~~~~~~ 609 (668)
|++.+..
T Consensus 957 Ff~~~~~ 963 (1151)
T KOG0206|consen 957 FFLPYLV 963 (1151)
T ss_pred eeeeHhh
Confidence 9877654
No 18
>KOG0210|consensus
Probab=100.00 E-value=2.1e-70 Score=571.80 Aligned_cols=556 Identities=21% Similarity=0.265 Sum_probs=433.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
+-|+|...++.|-.-|+.++|.+.+.++.+++++++++... ..-+..|+ ..+++.+.++...
T Consensus 303 RsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~----------~g~~~~wy--------i~~~RfllLFS~I 364 (1051)
T KOG0210|consen 303 RSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAM----------KGFGSDWY--------IYIIRFLLLFSSI 364 (1051)
T ss_pred HHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHh----------hcCCCchH--------HHHHHHHHHHhhh
Confidence 34789999999999999999999999887777666553321 11245674 4566777788888
Q ss_pred ccCchHHHHHHHHHHHHHHHhhC----CCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecC------
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKD----NNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNI------ 151 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~----~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~------ 151 (668)
||.+|-..+.++-..-...+.++ |.+||+....|+||+++++.+|||||||+|+|.+++++.+-..|..+
T Consensus 365 IPISLRvnlDmaK~~ys~~i~~D~~IpgtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLGTv~~s~e~~~eV~ 444 (1051)
T KOG0210|consen 365 IPISLRVNLDMAKIVYSWQIEHDKNIPGTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLGTVAYSAETMDEVS 444 (1051)
T ss_pred ceeEEEEehhHHHhhHhhhcccCCCCCceeeecCCChHHhcceEEEEecCcCccccchheeeeeeeeeeeccHhHHHHHH
Confidence 99999999999888777777665 56799999999999999999999999999999999999987766431
Q ss_pred --------CCC----------CCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHH
Q psy11770 152 --------PKY----------EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQT 213 (668)
Q Consensus 152 --------~~~----------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~ 213 (668)
+.. ..........+..+++.||+.+. ..++++...|++.+|+|+|++++.+..|.....
T Consensus 445 ~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTP---v~e~~ge~sYQAaSPDEVAiVkwTe~VGl~L~~ 521 (1051)
T KOG0210|consen 445 QHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTP---VFEDDGEVSYQAASPDEVAIVKWTETVGLKLAK 521 (1051)
T ss_pred HHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCc---ccCCCceEEeecCCCCeEEEEEeeeecceEEee
Confidence 000 01112234567778888988753 233445778999999999999998887754322
Q ss_pred H-----hhhC-----CccceeeeeccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHH
Q psy11770 214 V-----RDDL-----PEEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGR 281 (668)
Q Consensus 214 ~-----~~~~-----~~~~~~~~~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~ 281 (668)
. .-+. ..++++..|||+|+.|||.++|++ .+++..|.|||+-++....+. + .
T Consensus 522 Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~-----------N-----d 585 (1051)
T KOG0210|consen 522 RDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY-----------N-----D 585 (1051)
T ss_pred cccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc-----------c-----h
Confidence 1 1112 257899999999999999999998 489999999999988766542 1 2
Q ss_pred HHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC-CCCcc---------cccccCeEEEEEEeecCCCCCchHH
Q psy11770 282 LVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP-NWDDE---------SNIVSHLTCLCVIGIEDPVRPEVPE 351 (668)
Q Consensus 282 ~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~-~~~~~---------~~~e~~l~~lG~~~~~d~l~~~~~~ 351 (668)
++++...+||++|+|||++|.|.+++++++.++..|.... ...++ ..+|+||.++|++|+||+++++++.
T Consensus 586 WleEE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~ 665 (1051)
T KOG0210|consen 586 WLEEECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKP 665 (1051)
T ss_pred hhhhhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHh
Confidence 4567788999999999999999999998877655543322 12221 2578999999999999999999999
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEee--------------------------hhhHHHhhhcC
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILE--------------------------GKEFNRRVRDN 405 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~--------------------------g~~~~~~~~~~ 405 (668)
+++.||+||||+||+|||+.+||..+|+..++...+..+-++. |+.++-.+
T Consensus 666 tLElLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~ihv~~~v~sr~dah~eL~~lR~k~~~aLvi~G~Sl~~cl--- 742 (1051)
T KOG0210|consen 666 TLELLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQYIHVIRSVTSRGDAHNELNNLRRKTDCALVIDGESLEFCL--- 742 (1051)
T ss_pred HHHHHhhcCcEEEEEcCcchhheeeeehhccceecCceEEEEEecCCchHHHHHHHHhhcCCCcEEEEcCchHHHHH---
Confidence 9999999999999999999999999999999987765543332 22222111
Q ss_pred chhhhHHHHhhhc--CCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHH
Q psy11770 406 NGEVQQNLLDKVW--PRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKE 483 (668)
Q Consensus 406 ~~~~~~~~l~~~~--~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~ 483 (668)
+.-++++.++. ....++|||+|.||+++++.+++ ..++.|++||||.||+.|+++||+||++-+++..+|.-
T Consensus 743 --~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~----~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASL 816 (1051)
T KOG0210|consen 743 --KYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQK----KTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASL 816 (1051)
T ss_pred --HHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHH----hhCceEEEEcCCCccchheeecccceeeecccccccch
Confidence 01122222222 24578999999999999999864 35789999999999999999999999976588888999
Q ss_pred hcchhcccCCchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCch---hHHHHHHHHHHHhHHHHH
Q psy11770 484 ASDIILTDDNFSSIVKAV-MWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPL---KAVQMLWVNLIMDTLASL 559 (668)
Q Consensus 484 ~ad~vl~~~~~~~i~~~l-~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l---~~~~~l~~n~~~~~~~~l 559 (668)
|||+.+. .|+++.+++ -|||..|+|..+.-+|.+-..+....++..+...+.+.|. -.+.|..+..+.+.+|.+
T Consensus 817 AADfSIt--qF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVF 894 (1051)
T KOG0210|consen 817 AADFSIT--QFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVF 894 (1051)
T ss_pred hccccHH--HHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhh
Confidence 9999999 899999997 5999999999999999999999888888877766555554 345677899999999999
Q ss_pred HhcccC-CCccccccCCC----CCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Q psy11770 560 ALATEM-PTPDLLLRKPY----GRTKALISKTMMKNIIGQAIYQLVIIFGI 605 (668)
Q Consensus 560 ~l~~~~-~~~~l~~~~P~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 605 (668)
++..+. .++.+...+|. -.+.+.++.+.|..|+..++||+.++.+.
T Consensus 895 Slv~d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g 945 (1051)
T KOG0210|consen 895 SLVLDRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYG 945 (1051)
T ss_pred eeeecccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHH
Confidence 988554 44444445552 34567899999999999999999887664
No 19
>KOG0208|consensus
Probab=100.00 E-value=1e-68 Score=581.18 Aligned_cols=552 Identities=21% Similarity=0.289 Sum_probs=407.4
Q ss_pred HHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE
Q psy11770 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ 147 (668)
Q Consensus 68 ~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 147 (668)
...+++++.++.+.+|+|||++++++..++.+||.|+||+|.+|+.+...|++|++||||||||||+.+.+..+......
T Consensus 416 ~~iiirsLDliTi~VPPALPAaltvG~~~a~~RLkkk~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 416 KTIIIRSLDLITIVVPPALPAALTVGIIYAQSRLKKKGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred HHHhhhhhcEEEEecCCCchhhhhHHHHHHHHHHHhcCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999988874322
Q ss_pred EecCCC-------C--------CCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCC---
Q psy11770 148 YKNIPK-------Y--------EDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGK--- 209 (668)
Q Consensus 148 ~~~~~~-------~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~--- 209 (668)
....+. . .+....-...+..+++.||+... .. ....|||.|.-+.+.....-.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~--v~-------g~l~GDPLdlkmfe~t~w~~ee~~ 566 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTL--VD-------GTLVGDPLDLKMFESTGWVYEEAD 566 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEE--eC-------CeeccCceeeeeeeccceEEEecc
Confidence 111100 0 00000113457777888886531 11 123455555544432211100
Q ss_pred -ChHH-----------Hh------hh---C-C-ccceeeeeccCCCCceEEEEEee--CCeEEEEEcCchHHHHhhcccc
Q psy11770 210 -NYQT-----------VR------DD---L-P-EEVFTRVYTFNSVRKSMSTVIPK--KNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 210 -~~~~-----------~~------~~---~-~-~~~~~~~~~F~s~rk~msvvv~~--~~~~~~~~KGa~e~il~~c~~~ 264 (668)
.... ++ +. . + ...+++.|||+|..+|||||++. +++..+|+|||||.|.+.|+..
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~ 646 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE 646 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc
Confidence 0000 00 00 0 1 35688999999999999999998 5789999999999999999732
Q ss_pred cccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCC
Q psy11770 265 YGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDP 344 (668)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~ 344 (668)
..++.+++.+++|+.+|+||+|+|+|.++... |. ......++.+|+||+|+|++.||++
T Consensus 647 -------------tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~~---~~-----~~~~~~Rd~vEs~l~FlGLiVmeNk 705 (1140)
T KOG0208|consen 647 -------------TVPADYQEVLKEYTHQGFRVIALASKELETST---LQ-----KAQKLSRDTVESNLEFLGLIVMENK 705 (1140)
T ss_pred -------------cCCccHHHHHHHHHhCCeEEEEEecCccCcch---HH-----HHhhccHhhhhccceeeEEEEeecc
Confidence 11223678899999999999999999987651 10 0112357789999999999999999
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH-------------------------H
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF-------------------------N 399 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~-------------------------~ 399 (668)
++++++.+|++|++|+||++|+||||..||..+|++||++.+....+..+-.+- .
T Consensus 706 LK~~T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~ 785 (1140)
T KOG0208|consen 706 LKEETKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPD 785 (1140)
T ss_pred cccccHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccC
Confidence 999999999999999999999999999999999999999988665544332200 0
Q ss_pred H-hhhcC---c-------------------hhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcC
Q psy11770 400 R-RVRDN---N-------------------GEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGD 456 (668)
Q Consensus 400 ~-~~~~~---~-------------------~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGD 456 (668)
. ..... + -+...+.++++..+..|||||+|.||.++|+.+ |.-++.|+||||
T Consensus 786 ~~~~~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~Il~~~~VfARMsP~qK~~Lie~l-----Qkl~y~VgfCGD 860 (1140)
T KOG0208|consen 786 PDLASVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKILLKGTVFARMSPDQKAELIEAL-----QKLGYKVGFCGD 860 (1140)
T ss_pred ccccCCccChhhhccceeEEEecCchhHHHHhhcHHHHHHHHhcCeEEeecCchhHHHHHHHH-----HhcCcEEEecCC
Confidence 0 00000 0 011345677788888999999999999999997 667999999999
Q ss_pred CccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy11770 457 GTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAV 536 (668)
Q Consensus 457 g~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~ 536 (668)
|+||+.|||+||+||+.+ ..+|.-||.++..-.+.+++.++|+|||..+-.--.++.|...+.+......+ .++.
T Consensus 861 GANDCgALKaAdvGISLS---eaEASvAApFTSk~~~I~cVp~vIrEGRaALVTSf~~FkYMalYs~iqFisv~--~LY~ 935 (1140)
T KOG0208|consen 861 GANDCGALKAADVGISLS---EAEASVAAPFTSKTPSISCVPDVIREGRAALVTSFACFKYMALYSAIQFISVV--FLYL 935 (1140)
T ss_pred CcchhhhhhhcccCcchh---hhhHhhcCccccCCCchhhHhHHHhhhhhhhhhhHHHHHHHHHHHHHHHHhhh--eeee
Confidence 999999999999999987 45677889999988899999999999999999999999998888777554433 2455
Q ss_pred CCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc--cccC
Q psy11770 537 QDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGD--KLLD 614 (668)
Q Consensus 537 ~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 614 (668)
....+++.|.++++++...+.+++++..+|...+-..+| +..+++++.+...++|.++..++-+...+... .|+.
T Consensus 936 ~~~nl~D~Qfl~iDLlii~pia~~m~~~~a~~~L~~~rP---~~~L~s~~~~~~l~~q~vli~l~q~i~~l~~~~qpw~~ 1012 (1140)
T KOG0208|consen 936 INSNLGDLQFLFIDLLIITPIAVMMSRFDASDKLFPKRP---PTNLLSKKILVPLLLQIVLICLVQWILTLIVEPQPWYE 1012 (1140)
T ss_pred ecccccchhhhhhHHHHHHHHHHHHccCcHHHHhcCCCC---CccccccchhhhhHHHHHHHHHHHHhhheeecccccee
Confidence 677899999999999999999999999999999988877 56699999888888888777766665554432 2221
Q ss_pred CCCCCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccCCcccccccccCCC
Q psy11770 615 IPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVFEGLFTTHS 667 (668)
Q Consensus 615 ~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~~~~~~n~~ 667 (668)
-+.. +..+.......|..|..=.+.-+++.+..- ...++.+++++|+.
T Consensus 1013 pp~~--~~~~nt~s~~~T~lF~vS~fqYi~~a~v~S---~g~pfr~pl~~n~~ 1060 (1140)
T KOG0208|consen 1013 PPNP--QVDDNTQSSDNTSLFFVSSFQYIFIALVLS---KGSPFRRPLWKNVL 1060 (1140)
T ss_pred cCCC--CcCcccccceeeEeeehhHHHHHHhheeec---cCCcccCchhcCce
Confidence 1111 101112223345555444444444444332 22355567777764
No 20
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=4.9e-62 Score=542.13 Aligned_cols=387 Identities=22% Similarity=0.285 Sum_probs=304.6
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..+..+...+..+. +++++++.. +..+ . +| ...+...+++++++
T Consensus 199 ki~~lve~a~~~ktp~e~~l~~l~~~l~ii~-----l~~~~~~~~--~~~~--~--~~--------~~~~~~~val~V~~ 259 (673)
T PRK14010 199 KMIGLVEGATRKKTPNEIALFTLLMTLTIIF-----LVVILTMYP--LAKF--L--NF--------NLSIAMLIALAVCL 259 (673)
T ss_pred HHHHHHhhccccCCHHHHHHHHHHHHHhHHH-----HHHHHHHHH--HHhh--c--cH--------HHHHHHHHHHHHHh
Confidence 5667778888889999988777654443211 111111110 0000 0 11 23456677888888
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||..++++++.|++||+|+|+++|+++++|+||++|+||||||||||+|++.+.++...+. ..
T Consensus 260 IP~aL~~~~~~~~~~g~~r~ak~gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~~----------~~--- 326 (673)
T PRK14010 260 IPTTIGGLLSAIGIAGMDRVTQFNILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVKS----------SS--- 326 (673)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCCEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCCC----------cc---
Confidence 99999999999999999999999999999999999999999999999999997777666442110 01
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+......|+.. ..+|.+.|+++++.+.+.+....+ .+..||++++|+|++.++
T Consensus 327 ~~~ll~~a~~~~~~----------------s~~P~~~AIv~~a~~~~~~~~~~~--------~~~~pF~~~~k~~gv~~~ 382 (673)
T PRK14010 327 FERLVKAAYESSIA----------------DDTPEGRSIVKLAYKQHIDLPQEV--------GEYIPFTAETRMSGVKFT 382 (673)
T ss_pred HHHHHHHHHHhcCC----------------CCChHHHHHHHHHHHcCCCchhhh--------cceeccccccceeEEEEC
Confidence 11223322223211 127999999999987665432111 234799999999998753
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ .+.||||+.++++|+. +|...+ .+ .++..++++++|+|+++++.
T Consensus 383 --g~--~i~kGa~~~il~~~~~----~g~~~~--~~-----~~~~~~~~a~~G~~~l~v~~------------------- 428 (673)
T PRK14010 383 --TR--EVYKGAPNSMVKRVKE----AGGHIP--VD-----LDALVKGVSKKGGTPLVVLE------------------- 428 (673)
T ss_pred --CE--EEEECCHHHHHHHhhh----cCCCCc--hH-----HHHHHHHHHhCCCeEEEEEE-------------------
Confidence 33 4559999999999974 222111 11 23456788999999998762
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|++++|+++++|++||+++++|++||++||+++|+|||++.||.++|+++|+.
T Consensus 429 ----------~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI~----------------- 481 (673)
T PRK14010 429 ----------DNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGVD----------------- 481 (673)
T ss_pred ----------CCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc-----------------
Confidence 45899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++|++|+||.++|+.+ |..|+.|+|+|||.||+|+|++|||||||| +|++.|
T Consensus 482 --------------------~v~A~~~PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdvA 535 (673)
T PRK14010 482 --------------------RFVAECKPEDKINVIREE-----QAKGHIVAMTGDGTNDAPALAEANVGLAMN-SGTMSA 535 (673)
T ss_pred --------------------eEEcCCCHHHHHHHHHHH-----HhCCCEEEEECCChhhHHHHHhCCEEEEeC-CCCHHH
Confidence 479999999999999996 667999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFI 531 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~ 531 (668)
|++||+++.||+|..|.+++++||++|.|+++++.|+++.|+...+..+.
T Consensus 536 keAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~~~~~~~~~i~~ 585 (673)
T PRK14010 536 KEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIANDIAKYFAILP 585 (673)
T ss_pred HHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeeeccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999977765544
No 21
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=100.00 E-value=2.7e-60 Score=528.69 Aligned_cols=392 Identities=24% Similarity=0.325 Sum_probs=306.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..++++...+..+.+++++.++. +.+ + .+.+| .+..++++++++
T Consensus 199 ki~~lve~a~~~ktp~e~al~~l~~~l~~i~l~~~~~~~~--~~~-----~--~g~~~----------~l~~~iallV~a 259 (679)
T PRK01122 199 RMIALVEGAKRQKTPNEIALTILLAGLTIIFLLVVATLPP--FAA-----Y--SGGAL----------SITVLVALLVCL 259 (679)
T ss_pred HHHHHHHhccccCCHHHHHHHHHHHhhhHHHHHHHHHHHH--HHH-----H--hCchH----------HHHHHHHHHHHc
Confidence 4566777888889999999998876665433322211111 111 1 12222 567788999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|+..+++....|+.||+|+|+++|+++++|+||++|+||||||||||+|+|.+.+++..+. .++
T Consensus 260 iP~alg~l~~~i~i~g~~r~ak~gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~-- 327 (679)
T PRK01122 260 IPTTIGGLLSAIGIAGMDRVLQANVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG----------VTE-- 327 (679)
T ss_pred ccchhhhHHHHHHHHHHHHHhcCCeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC----------CCH--
Confidence 99999999999999999999999999999999999999999999999999999999998864221 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHH-cCCChHHHhhhCCccceeeeeccCCCCceEEEEE
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVA-IGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVI 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~-~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv 240 (668)
+.+......++... .+|...|+++++.+ .+...... . +...+.+||++.+|+|++.+
T Consensus 328 -~~ll~~a~~~s~~s----------------~hP~~~AIv~~a~~~~~~~~~~~--~---~~~~~~~pF~s~~~~~gv~~ 385 (679)
T PRK01122 328 -EELADAAQLSSLAD----------------ETPEGRSIVVLAKQRFNLRERDL--Q---SLHATFVPFSAQTRMSGVDL 385 (679)
T ss_pred -HHHHHHHHHhcCCC----------------CCchHHHHHHHHHhhcCCCchhh--c---cccceeEeecCcCceEEEEE
Confidence 22333333332211 14677899998876 33321111 1 12356789999998888765
Q ss_pred eeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 241 PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 241 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
. + ..+.||++|.+++.|.. +|... + +..++..++++++|+|++++|+
T Consensus 386 ~--g--~~~~kGa~e~il~~~~~----~g~~~--~-----~~~~~~~~~~a~~G~~~l~va~------------------ 432 (679)
T PRK01122 386 D--G--REIRKGAVDAIRRYVES----NGGHF--P-----AELDAAVDEVARKGGTPLVVAE------------------ 432 (679)
T ss_pred C--C--EEEEECCHHHHHHHHHh----cCCcC--h-----HHHHHHHHHHHhCCCcEEEEEE------------------
Confidence 3 3 47899999999999963 22211 1 1134567889999999999994
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
|++++|+++++|++||++++++++||++||+++|+|||++.||.++|+++|+.
T Consensus 433 -----------~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGId---------------- 485 (679)
T PRK01122 433 -----------DNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD---------------- 485 (679)
T ss_pred -----------CCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCc----------------
Confidence 45899999999999999999999999999999999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.+++|++|+||.++|+.+ |..|+.|+|+|||.||+|||++|||||||| +|++.
T Consensus 486 ---------------------~v~A~~~PedK~~iV~~l-----Q~~G~~VaMtGDGvNDAPALa~ADVGIAMg-sGTdv 538 (679)
T PRK01122 486 ---------------------DFLAEATPEDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQA 538 (679)
T ss_pred ---------------------EEEccCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHH
Confidence 479999999999999996 567899999999999999999999999999 99999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNV---VAVIVAFIGA 533 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~---~~~~~~~~~~ 533 (668)
||++||+++.|++|..+.+++++||+..-.-.....|++..-+ ..++++++..
T Consensus 539 AkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~n~~~~~~~i~p~~~~~ 594 (679)
T PRK01122 539 AKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIANDVAKYFAIIPAMFAA 594 (679)
T ss_pred HHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999766666778876433 2344444443
No 22
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=100.00 E-value=7.2e-57 Score=500.02 Aligned_cols=384 Identities=23% Similarity=0.315 Sum_probs=302.8
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||.+..++++.++||+|..++.+...+..+.++++ +++ +. +..+ .+..| .+..++++++++
T Consensus 200 ri~~lve~a~~~ktplq~~l~~l~~~l~~v~li~~---~~~---~~-~~~~--~~~~~----------~~~~lvallV~a 260 (675)
T TIGR01497 200 RMIALVEGAQRRKTPNEIALTILLIALTLVFLLVT---ATL---WP-FAAY--GGNAI----------SVTVLVALLVCL 260 (675)
T ss_pred HHHHHHHhcccCCChHHHHHHHHHHHHHHHHHHHH---HHH---HH-HHHh--cChhH----------HHHHHHHHHHHh
Confidence 45667778888899999999888765543222211 111 11 1111 11111 456678899999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|+...+.....|++||+|+|+++|+.+++|++|++|+||||||||||+|+|++.+++..+. .+.
T Consensus 261 iP~aLg~l~~av~iag~~r~ar~gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~----------~~~-- 328 (675)
T TIGR01497 261 IPTTIGGLLSAIGIAGMDRVLGFNVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG----------VDE-- 328 (675)
T ss_pred CchhhhhHHHHHHHHHHHHHHHCCeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC----------CcH--
Confidence 99998888887777899999999999999999999999999999999999999999998874221 111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+......++.. ..+|.+.|+++++.+.|.+....+ ....+..||++.+|+|++.+.
T Consensus 329 -~~ll~~aa~~~~~----------------s~hP~a~Aiv~~a~~~~~~~~~~~-----~~~~~~~pf~~~~~~sg~~~~ 386 (675)
T TIGR01497 329 -KTLADAAQLASLA----------------DDTPEGKSIVILAKQLGIREDDVQ-----SLHATFVEFTAQTRMSGINLD 386 (675)
T ss_pred -HHHHHHHHHhcCC----------------CCCcHHHHHHHHHHHcCCCccccc-----cccceEEEEcCCCcEEEEEEe
Confidence 2233333333221 125888999999987665432211 123467899999887776543
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ ..++||+||.+++.|.. +|... ++ .+++.+++++++|+|++++|+.
T Consensus 387 -~g--~~~~kGa~e~i~~~~~~----~g~~~--~~-----~~~~~~~~~a~~G~r~l~va~~------------------ 434 (675)
T TIGR01497 387 -NG--RMIRKGAVDAIKRHVEA----NGGHI--PT-----DLDQAVDQVARQGGTPLVVCED------------------ 434 (675)
T ss_pred -CC--eEEEECCHHHHHHHHHh----cCCCC--cH-----HHHHHHHHHHhCCCeEEEEEEC------------------
Confidence 33 46899999999998852 22211 11 1346678899999999999952
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
.+++|+++++|++||+++++|++|+++||+++|+|||+..+|.++|+++|+.
T Consensus 435 -----------~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI~----------------- 486 (675)
T TIGR01497 435 -----------NRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVD----------------- 486 (675)
T ss_pred -----------CEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC-----------------
Confidence 3899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++|++|++|.++|+.+ |..++.|+|+|||.||+|||++||+||||+ +|++.+
T Consensus 487 --------------------~v~a~~~PedK~~~v~~l-----q~~g~~VamvGDG~NDapAL~~AdvGiAm~-~gt~~a 540 (675)
T TIGR01497 487 --------------------DFIAEATPEDKIALIRQE-----QAEGKLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 540 (675)
T ss_pred --------------------EEEcCCCHHHHHHHHHHH-----HHcCCeEEEECCCcchHHHHHhCCEeEEeC-CCCHHH
Confidence 478999999999999997 456889999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVV 524 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~ 524 (668)
+++||+++.|++|..+.+++++||+++-+......|++...+.
T Consensus 541 keaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~~~~ 583 (675)
T TIGR01497 541 KEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIANDVA 583 (675)
T ss_pred HHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecccHH
Confidence 9999999999999999999999999999999999999877664
No 23
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=100.00 E-value=7.6e-54 Score=475.42 Aligned_cols=358 Identities=38% Similarity=0.556 Sum_probs=300.7
Q ss_pred cccccccCCCCCCchHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 3 PVEVAEKHDEKKSVLQAKLTKLA-IQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 3 ~v~~~~~~~~~~s~lq~~l~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
+....++.+..++|+|+..++++ .++..+.+++++++++.+...+ ....+| ...+.+++++++++
T Consensus 126 i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~------~~~~~~--------~~~~~~~~~vl~~~ 191 (499)
T TIGR01494 126 IAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGL------WDPNSI--------FKIFLRALILLVIA 191 (499)
T ss_pred HHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------cccccH--------HHHHHHHHHHHHHh
Confidence 33444555666899999999999 5666666655555444332110 000023 56788999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++..+..+|+++|+++|+++++|+||+++++|||||||||+|+|+|.++++.+.
T Consensus 192 ~P~aL~~~~~~~~~~~~~~~~~~gilvk~~~~lE~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~--------------- 256 (499)
T TIGR01494 192 IPIALPLAVTIALAVGDARLAKKGIVVRSLNALEELGKVDYICSDKTGTLTKNEMSFKKVSVLGG--------------- 256 (499)
T ss_pred cCCcHHHHHHHHHHHHHHHHHHCCcEEechhhhhhccCCcEEEeeCCCccccCceEEEEEEecCC---------------
Confidence 99999999999999999999999999999999999999999999999999999999999875321
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+..++|.|.|+++++.+.+ .+..||++.+|+|+++++
T Consensus 257 ---------------------------~~~s~hp~~~ai~~~~~~~~---------------~~~~~f~~~~~~~~~~~~ 294 (499)
T TIGR01494 257 ---------------------------EYLSGHPDERALVKSAKWKI---------------LNVFEFSSVRKRMSVIVR 294 (499)
T ss_pred ---------------------------CcCCCChHHHHHHHHhhhcC---------------cceeccCCCCceEEEEEe
Confidence 01235799999999876411 245799999999999998
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
.+++ .|+||+++.+.++|.. +.+..++++++|+|++++|++.
T Consensus 295 ~~~~--~~~~G~~~~i~~~~~~-------------------~~~~~~~~~~~g~~~~~~a~~~----------------- 336 (499)
T TIGR01494 295 GPDG--TYVKGAPEFVLSRVKD-------------------LEEKVKELAQSGLRVLAVASKE----------------- 336 (499)
T ss_pred cCCc--EEEeCCHHHHHHhhHH-------------------HHHHHHHHHhCCCEEEEEEECC-----------------
Confidence 6333 3789999999998852 1223446788999999999743
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
+++|+++++|++|++++++|+.|+++|++++|+|||+..+|..+|+++|+
T Consensus 337 ------------~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~lgi------------------ 386 (499)
T TIGR01494 337 ------------TLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKELGI------------------ 386 (499)
T ss_pred ------------eEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCc------------------
Confidence 79999999999999999999999999999999999999999999999986
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
+++++|++|.++|+.+ +..|+.|+|+|||.||+||+++|||||+|+ +
T Consensus 387 ----------------------~~~~~p~~K~~~v~~l-----~~~g~~v~~vGDg~nD~~al~~Advgia~~------a 433 (499)
T TIGR01494 387 ----------------------FARVTPEEKAALVEAL-----QKKGRVVAMTGDGVNDAPALKKADVGIAMG------A 433 (499)
T ss_pred ----------------------eeccCHHHHHHHHHHH-----HHCCCEEEEECCChhhHHHHHhCCCccccc------h
Confidence 4779999999999987 456789999999999999999999999997 6
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.++++..+..++.+||+++.++++++.|.+++|+..+++++++
T Consensus 434 ~~~adivl~~~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~~ 484 (499)
T TIGR01494 434 KAAADIVLLDDNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAALL 484 (499)
T ss_pred HHhCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999988777653
No 24
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-54 Score=478.12 Aligned_cols=380 Identities=26% Similarity=0.348 Sum_probs=308.0
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||++..++++.+|+|.|+..||++.++.+.++++++++|++|.+. .+.+| ...+..++++++++
T Consensus 303 ~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~--------~~~~~--------~~a~~~a~avLVIa 366 (713)
T COG2217 303 RIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLF--------GGGDW--------ETALYRALAVLVIA 366 (713)
T ss_pred HHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHh--------cCCcH--------HHHHHHHHhheeee
Confidence 578889999999999999999999999999898888877754321 12344 45788999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|+++..+..+.+++|+++|+..++|.++++|+++||||||||+|++.|.++...+. +++.
T Consensus 367 CPCALgLAtP~ai~~g~g~aA~~GILiK~g~~LE~l~~v~tvvFDKTGTLT~G~p~v~~v~~~~~-----------~e~~ 435 (713)
T COG2217 367 CPCALGLATPTAILVGIGRAARRGILIKGGEALERLAKVDTVVFDKTGTLTEGKPEVTDVVALDG-----------DEDE 435 (713)
T ss_pred CccHHHhHHHHHHHHHHHHHHhCceEEeChHHHHhhccCCEEEEeCCCCCcCCceEEEEEecCCC-----------CHHH
Confidence 99999999999999999999999999999999999999999999999999999999999875331 1221
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.-.+..++. ..+.+|.-.|+++++...|..... ..+.+| .+.....+
T Consensus 436 ~L~laAalE-------------------~~S~HPiA~AIv~~a~~~~~~~~~---------~~~~i~----G~Gv~~~v- 482 (713)
T COG2217 436 LLALAAALE-------------------QHSEHPLAKAIVKAAAERGLPDVE---------DFEEIP----GRGVEAEV- 482 (713)
T ss_pred HHHHHHHHH-------------------hcCCChHHHHHHHHHHhcCCCCcc---------ceeeec----cCcEEEEE-
Confidence 122222222 122468999999988765521100 011111 11111111
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+| ..+.-|++..+.+.-.. .+. ..+..+.+.++|..++.++.
T Consensus 483 -~g--~~v~vG~~~~~~~~~~~----------~~~------~~~~~~~~~~~G~t~v~va~------------------- 524 (713)
T COG2217 483 -DG--ERVLVGNARLLGEEGID----------LPL------LSERIEALESEGKTVVFVAV------------------- 524 (713)
T ss_pred -CC--EEEEEcCHHHHhhcCCC----------ccc------hhhhHHHHHhcCCeEEEEEE-------------------
Confidence 33 23445877766432110 110 12445778889988888874
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|..++|+++++|++|++++++|++||+.|++++|+|||+..+|.++|+++||.
T Consensus 525 ----------dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA~~lGId----------------- 577 (713)
T COG2217 525 ----------DGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIAKELGID----------------- 577 (713)
T ss_pred ----------CCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcChH-----------------
Confidence 34899999999999999999999999999999999999999999999999993
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.+++.+.|++|.++|+.+ |..|+.|+|+|||.||+|+|.+|||||||| .|+|.+
T Consensus 578 --------------------~v~AellPedK~~~V~~l-----~~~g~~VamVGDGINDAPALA~AdVGiAmG-~GtDvA 631 (713)
T COG2217 578 --------------------EVRAELLPEDKAEIVREL-----QAEGRKVAMVGDGINDAPALAAADVGIAMG-SGTDVA 631 (713)
T ss_pred --------------------hheccCCcHHHHHHHHHH-----HhcCCEEEEEeCCchhHHHHhhcCeeEeec-CCcHHH
Confidence 478999999999999997 567899999999999999999999999999 799999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+++||+++.+++...+.+++..+|+++++|++++.|.|.+|.+.+.+..++
T Consensus 632 ~eaADvvL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~iplA~~g 682 (713)
T COG2217 632 IEAADVVLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIPLAAGG 682 (713)
T ss_pred HHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888765
No 25
>KOG0209|consensus
Probab=100.00 E-value=1.7e-54 Score=460.65 Aligned_cols=539 Identities=21% Similarity=0.236 Sum_probs=379.9
Q ss_pred HHHHHHHHhhhhhhccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEE
Q psy11770 68 VRFFIVGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQ 147 (668)
Q Consensus 68 ~~~~~~~i~ilv~~iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~ 147 (668)
.+.++-++.|+...||+-||+=++++.-.+...|+|.+++|..|-++.-.|+||+.|||||||||+..|.|.++--....
T Consensus 427 YKL~LeC~LIlTSVvPpELPmELSmAVNsSL~ALak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~Gvag~~~~ 506 (1160)
T KOG0209|consen 427 YKLFLECTLILTSVVPPELPMELSMAVNSSLIALAKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVEGVAGLSAD 506 (1160)
T ss_pred hheeeeeeEEEeccCCCCCchhhhHHHHHHHHHHHHhceeecCccccccCCceeEEEecCCCccccccEEEEecccccCC
Confidence 34677788899999999999999999999999999999999999999999999999999999999999999887542221
Q ss_pred EecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHh------hhCCcc
Q psy11770 148 YKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVR------DDLPEE 221 (668)
Q Consensus 148 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~------~~~~~~ 221 (668)
.......++.+.+ -...++.||+.. ..+ ...+|||.|.|.++...+ +.+... ......
T Consensus 507 ~~~~~~~s~~p~~----t~~vlAscHsLv----~le-----~~lVGDPlEKA~l~~v~W---~~~k~~~v~p~~~~~~~l 570 (1160)
T KOG0209|consen 507 EGALTPASKAPNE----TVLVLASCHSLV----LLE-----DKLVGDPLEKATLEAVGW---NLEKKNSVCPREGNGKKL 570 (1160)
T ss_pred cccccchhhCCch----HHHHHHHHHHHH----Hhc-----CcccCChHHHHHHHhcCc---ccccCcccCCCcCCCccc
Confidence 1000011111222 233445566542 111 136899999999886532 222111 111235
Q ss_pred ceeeeeccCCCCceEEEEEeeC-----CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcce
Q psy11770 222 VFTRVYTFNSVRKSMSTVIPKK-----NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLR 296 (668)
Q Consensus 222 ~~~~~~~F~s~rk~msvvv~~~-----~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlR 296 (668)
+|.+.|.|+|..|||||+.... .++++.+|||||+|-++.+... +.+++...+|+++|.|
T Consensus 571 kI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~dvP---------------~dY~~iYk~ytR~GsR 635 (1160)
T KOG0209|consen 571 KIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRDVP---------------KDYDEIYKRYTRQGSR 635 (1160)
T ss_pred chhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHhCc---------------hhHHHHHHHHhhccce
Confidence 6788999999999999998763 3689999999999998875431 2256778899999999
Q ss_pred eeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH
Q psy11770 297 TISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS 376 (668)
Q Consensus 297 vl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ 376 (668)
|||+|||.+..-..+ .....+++++|+||+|.|++.+.-|++++++++|+.|++++++++|+|||++.||.+
T Consensus 636 VLALg~K~l~~~~~~--------q~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~vvMITGDnpLTAch 707 (1160)
T KOG0209|consen 636 VLALGYKPLGDMMVS--------QVRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHRVVMITGDNPLTACH 707 (1160)
T ss_pred EEEEecccccccchh--------hhhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCceEEEEeCCCccchhe
Confidence 999999998732111 111235788999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCccCCCce---------------------------------------EEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 377 IATKCGIVKPGEDY---------------------------------------LILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 377 ia~~~gi~~~~~~~---------------------------------------i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
+|+++|+.....-+ ++++|..++.+ ...+.+..+
T Consensus 708 Vak~v~iv~k~~~vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l-------~~~~~l~~l 780 (1160)
T KOG0209|consen 708 VAKEVGIVEKPTLVLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHL-------QATDQLRRL 780 (1160)
T ss_pred ehheeeeeccCceeeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHH-------hhhHHHHHh
Confidence 99999996542111 11222222221 123356677
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH-----------------
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV----------------- 480 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~----------------- 480 (668)
...+.||||+.|.||..++..+ +..|+.++|||||.||+.|||+||||||.- ++.+.
T Consensus 781 ~~hv~VfARvaP~QKE~ii~tl-----K~~Gy~TLMCGDGTNDVGALK~AhVGVALL-~~~~e~~~~~~~~~~~k~~~~~ 854 (1160)
T KOG0209|consen 781 IPHVWVFARVAPKQKEFIITTL-----KKLGYVTLMCGDGTNDVGALKQAHVGVALL-NNPEESKKDKEKRRKKKLKLEP 854 (1160)
T ss_pred hhheeEEEeeChhhHHHHHHHH-----HhcCeEEEEecCCCcchhhhhhcccceehh-cCChhhhhHHhhhhhhccccCc
Confidence 7888999999999999999986 668999999999999999999999999975 32210
Q ss_pred ------------------------------------------------------HHHhcchhcccCCchHHHHHHHHHHH
Q psy11770 481 ------------------------------------------------------AKEASDIILTDDNFSSIVKAVMWGRN 506 (668)
Q Consensus 481 ------------------------------------------------------ak~~ad~vl~~~~~~~i~~~l~~gR~ 506 (668)
|.-||.+.....+.+++.+.|+.||+
T Consensus 855 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~IIrQGRc 934 (1160)
T KOG0209|consen 855 AKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTHIIRQGRC 934 (1160)
T ss_pred hhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHHHHHhcch
Confidence 01134444444567888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHH
Q psy11770 507 VYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKT 586 (668)
Q Consensus 507 ~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~ 586 (668)
..-+.-+.+... .-|... ...-++.++..+.-|++.|...-.+++. ...+.+....|-+.+.+++|. .++||..
T Consensus 935 tLVtTlQMfKIL-ALN~Li-sAYslSvlyldGVKfgD~QaTisGlLla-~cFlfISrskPLetLSkeRP~---~nIFN~Y 1008 (1160)
T KOG0209|consen 935 TLVTTLQMFKIL-ALNCLI-SAYSLSVLYLDGVKFGDTQATISGLLLA-ACFLFISRSKPLETLSKERPL---PNIFNVY 1008 (1160)
T ss_pred hHHHHHHHHHHH-HHHHHH-HHHHHHHhhhcCceecchhHhHHHHHHH-HHHhheecCCchhhHhhcCCC---CCcchHH
Confidence 998765554432 222221 1122334555667788888887766554 344667788899999999884 4599999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCCCCCCcccchhhHHHHHHHHHHHHHH-HHhhcccCCcccccccccC
Q psy11770 587 MMKNIIGQAIYQLVIIFGILFFGDKLLDIPTGRGAEYGSLPTQHFTIIFNTFVLMTLFNE-INARKIHGQRNVFEGLFTT 665 (668)
Q Consensus 587 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~~~~~~-~~~r~~~~~~~~~~~~~~n 665 (668)
.+..++.|-.+|...++++.--....-+-..+-+......+...+|..|..-...|+... .|-+ + +++.+.++.|
T Consensus 1009 ~i~svl~QFaVH~~tLvYi~~~a~~~~p~~~~vdl~~~F~PsllNt~vyiisl~~QvsTFAVNY~---G-~PF~Esl~eN 1084 (1160)
T KOG0209|consen 1009 IILSVLLQFAVHIATLVYITGEAYKLEPPEEKVDLEEKFSPSLLNTTVYIISLAQQVSTFAVNYQ---G-RPFRESLREN 1084 (1160)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHHHhcCCcccccChhcccChhhhhhHHHHHHHHHHHHHhhhhcc---C-cchhhhhhhc
Confidence 999999998888776665543222111000001111123345556666665555555542 2322 2 4677788888
Q ss_pred CCC
Q psy11770 666 HSV 668 (668)
Q Consensus 666 ~~~ 668 (668)
|-+
T Consensus 1085 K~l 1087 (1160)
T KOG0209|consen 1085 KGL 1087 (1160)
T ss_pred cch
Confidence 753
No 26
>KOG0207|consensus
Probab=100.00 E-value=1.9e-52 Score=455.11 Aligned_cols=433 Identities=25% Similarity=0.293 Sum_probs=331.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|||+..|+++..++|+|+.+||++.++.++.++++++++++|++...+.... -..| +..+..+|..+++++++|
T Consensus 470 ~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~~~--~~~~----~~~~~~a~~~aisVlviA 543 (951)
T KOG0207|consen 470 QIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVFKY--PRSF----FDAFSHAFQLAISVLVIA 543 (951)
T ss_pred HHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccccC--cchh----hHHHHHHHHhhheEEEEE
Confidence 6899999999999999999999999999999999998888776544322111 1122 356678899999999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|++...|....+++|+++|..+.+|.+.+|++|.||||||||+|++.|.++...++. .+...
T Consensus 544 CPCaLgLATPtAvmvatgvgA~nGvLIKGge~LE~~hkv~tVvFDKTGTLT~G~~~V~~~~~~~~~---------~~~~e 614 (951)
T KOG0207|consen 544 CPCALGLATPTAVMVATGVGATNGVLIKGGEALEKAHKVKTVVFDKTGTLTEGKPTVVDFKSLSNP---------ISLKE 614 (951)
T ss_pred CchhhhcCCceEEEEEechhhhcceEEcCcHHHHHHhcCCEEEEcCCCceecceEEEEEEEecCCc---------ccHHH
Confidence 999999999999999999999999999999999999999999999999999999999998765431 12222
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
...+..+... ...+|...|++++++..+.. ..+ ...+..-.|.-+.+. +-+.
T Consensus 615 ~l~~v~a~Es-------------------~SeHPig~AIv~yak~~~~~------~~~-~~~~~~~~~pg~g~~--~~~~ 666 (951)
T KOG0207|consen 615 ALALVAAMES-------------------GSEHPIGKAIVDYAKEKLVE------PNP-EGVLSFEYFPGEGIY--VTVT 666 (951)
T ss_pred HHHHHHHHhc-------------------CCcCchHHHHHHHHHhcccc------cCc-cccceeecccCCCcc--cceE
Confidence 2222222221 12368999999999876511 111 111122223222222 1111
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
.+++. .+=|.-+.+... |... .++ .+..+++..+.|..+.+++.
T Consensus 667 ~~~~~--i~iGN~~~~~r~--------~~~~--~~~-----i~~~~~~~e~~g~tvv~v~v------------------- 710 (951)
T KOG0207|consen 667 VDGNE--VLIGNKEWMSRN--------GCSI--PDD-----ILDALTESERKGQTVVYVAV------------------- 710 (951)
T ss_pred EeeeE--EeechHHHHHhc--------CCCC--chh-----HHHhhhhHhhcCceEEEEEE-------------------
Confidence 12222 334665554332 2211 111 34566777889999999985
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|.+++|+++++|++|+++..+|+.||+.||+++|+|||+..+|.++|+++|+.
T Consensus 711 ----------n~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn~~aA~svA~~VGi~----------------- 763 (951)
T KOG0207|consen 711 ----------NGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDNDAAARSVAQQVGID----------------- 763 (951)
T ss_pred ----------CCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCCHHHHHHHHHhhCcc-----------------
Confidence 44899999999999999999999999999999999999999999999999973
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
.|++...|+||.+.|+.+ |..+..|+|+|||.||+|+|.+|||||+|| .|++.|
T Consensus 764 --------------------~V~aev~P~~K~~~Ik~l-----q~~~~~VaMVGDGINDaPALA~AdVGIaig-~gs~vA 817 (951)
T KOG0207|consen 764 --------------------NVYAEVLPEQKAEKIKEI-----QKNGGPVAMVGDGINDAPALAQADVGIAIG-AGSDVA 817 (951)
T ss_pred --------------------eEEeccCchhhHHHHHHH-----HhcCCcEEEEeCCCCccHHHHhhccceeec-cccHHH
Confidence 689999999999999997 556789999999999999999999999999 889999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhHH---HHHHHHHHHhHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAV---QMLWVNLIMDTLAS 558 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~---~~l~~n~~~~~~~~ 558 (668)
.++||+++..|+..++..++..+|++..|++.++.|.+.||++.++++.. .|...+.-+.|| ..+..+.+...+.+
T Consensus 818 ieaADIVLmrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~IpIAag-vF~P~~~~L~Pw~A~lama~SSvsVv~sS 896 (951)
T KOG0207|consen 818 IEAADIVLMRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVGIPIAAG-VFAPFGIVLPPWMASLAMAASSVSVVLSS 896 (951)
T ss_pred HhhCCEEEEccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhhhee-cccCCccccCchHHHHHHHhhhHHHhhhH
Confidence 99999999999999999999999999999999999999999999888753 344333223333 33444444444445
Q ss_pred HHhc-ccCCC
Q psy11770 559 LALA-TEMPT 567 (668)
Q Consensus 559 l~l~-~~~~~ 567 (668)
+.|- +++|.
T Consensus 897 llLk~~k~p~ 906 (951)
T KOG0207|consen 897 LLLKRYKKPT 906 (951)
T ss_pred HHHhhccccc
Confidence 5444 34443
No 27
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=100.00 E-value=3.8e-51 Score=468.62 Aligned_cols=375 Identities=22% Similarity=0.327 Sum_probs=304.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||++..++++.+++|+|+.+|+++.++.++++.+++++++++.++ .+.+| ...+..++++++++
T Consensus 334 ~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~--------~~~~~--------~~~i~~a~svlvia 397 (741)
T PRK11033 334 RILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLL--------FAAPW--------QEWIYRGLTLLLIG 397 (741)
T ss_pred HHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------ccCCH--------HHHHHHHHHHHHHh
Confidence 466777888888999999999999999999988888877664321 12344 34677889999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|.+++|+++..+..+++|+|+++|+.+++|+|+++|+||||||||||+|+|+|.+++..+. .+++
T Consensus 398 cPcaL~latP~a~~~~l~~aar~gilik~~~alE~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~~- 466 (741)
T PRK11033 398 CPCALVISTPAAITSGLAAAARRGALIKGGAALEQLGRVTTVAFDKTGTLTEGKPQVTDIHPATG----------ISES- 466 (741)
T ss_pred chhhhhhhhHHHHHHHHHHHHHCCeEEcCcHHHHHhhCCCEEEEeCCCCCcCCceEEEEEEecCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999999875321 1122
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEE-E
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTV-I 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvv-v 240 (668)
+.+..+.+.. ....+|.+.|+++++.+.+.+ +||.++++.+... +
T Consensus 467 -~~l~~aa~~e-----------------~~s~hPia~Ai~~~a~~~~~~----------------~~~~~~~~~~~g~Gv 512 (741)
T PRK11033 467 -ELLALAAAVE-----------------QGSTHPLAQAIVREAQVRGLA----------------IPEAESQRALAGSGI 512 (741)
T ss_pred -HHHHHHHHHh-----------------cCCCCHHHHHHHHHHHhcCCC----------------CCCCcceEEEeeEEE
Confidence 1111111111 113479999999988754432 4566677766421 2
Q ss_pred e--eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccC
Q psy11770 241 P--KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIE 318 (668)
Q Consensus 241 ~--~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~ 318 (668)
+ .+|+. +.-|+++.+.+ ++++ ..+.++.+..+|+|++++|+
T Consensus 513 ~~~~~g~~--~~ig~~~~~~~--------------~~~~-----~~~~~~~~~~~g~~~v~va~---------------- 555 (741)
T PRK11033 513 EGQVNGER--VLICAPGKLPP--------------LADA-----FAGQINELESAGKTVVLVLR---------------- 555 (741)
T ss_pred EEEECCEE--EEEecchhhhh--------------ccHH-----HHHHHHHHHhCCCEEEEEEE----------------
Confidence 2 14443 23478777643 1111 22345778899999999995
Q ss_pred CCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH
Q psy11770 319 GDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF 398 (668)
Q Consensus 319 ~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~ 398 (668)
|.+++|+++++|++|++++++|+.|++.|++++|+|||+..+|.++|+++|+.
T Consensus 556 -------------~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~-------------- 608 (741)
T PRK11033 556 -------------NDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELGID-------------- 608 (741)
T ss_pred -------------CCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC--------------
Confidence 34899999999999999999999999999999999999999999999999992
Q ss_pred HHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCcc
Q psy11770 399 NRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGT 478 (668)
Q Consensus 399 ~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~ 478 (668)
.+++..|++|..+|+.++ . ++.|+|+|||.||+|||+.|||||+|| +++
T Consensus 609 ------------------------~~~~~~p~~K~~~v~~l~-----~-~~~v~mvGDgiNDapAl~~A~vgia~g-~~~ 657 (741)
T PRK11033 609 ------------------------FRAGLLPEDKVKAVTELN-----Q-HAPLAMVGDGINDAPAMKAASIGIAMG-SGT 657 (741)
T ss_pred ------------------------eecCCCHHHHHHHHHHHh-----c-CCCEEEEECCHHhHHHHHhCCeeEEec-CCC
Confidence 356789999999999873 2 358999999999999999999999999 899
Q ss_pred HHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 479 DVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 479 ~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
+.++++||+++.++++..+.+++..||++++||++++.|.+.+|++.+.+.+++
T Consensus 658 ~~a~~~adivl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~i~~a~~g 711 (741)
T PRK11033 658 DVALETADAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIFLVTTLLG 711 (741)
T ss_pred HHHHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999888777654
No 28
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=100.00 E-value=3.1e-48 Score=434.55 Aligned_cols=382 Identities=29% Similarity=0.377 Sum_probs=298.2
Q ss_pred ccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhcc
Q psy11770 4 VEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVP 83 (668)
Q Consensus 4 v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP 83 (668)
.+..++.+.+++|+|+.+++++.++.++++++++++++++... +. + ..+..++++++++||
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~---------~~-~---------~~~~~~~~vlv~~~P 209 (556)
T TIGR01525 149 VKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLAL---------GA-L---------GALYRALAVLVVACP 209 (556)
T ss_pred HHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------cc-c---------hHHHHHHHHHhhccc
Confidence 3445566678999999999999999988888877766554321 00 0 467789999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHHHH
Q psy11770 84 EGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDIAS 163 (668)
Q Consensus 84 ~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (668)
|+||++++++++.+..+|+++|+++|+++++|+||++|++|||||||||+|+|+|.+++..+... ...++
T Consensus 210 ~al~l~~~~~~~~~~~~~~~~gilvk~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~~~~~-------~~~~~--- 279 (556)
T TIGR01525 210 CALGLATPVAILVAIGVAARRGILIKGGDALEKLAKVKTVVFDKTGTLTTGKPTVVDVEPLDDAS-------ISEEE--- 279 (556)
T ss_pred cchhehhHHHHHHHHHHHHHCCceecCchHHHHhhcCCEEEEeCCCCCcCCceEEEEEEecCCCC-------ccHHH---
Confidence 99999999999999999999999999999999999999999999999999999999987643210 00112
Q ss_pred HHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEeeC
Q psy11770 164 KIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKK 243 (668)
Q Consensus 164 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~ 243 (668)
++..+.... ....+|.+.|+++++.+.|.+... .+ + .+.+| +
T Consensus 280 -~l~~a~~~e----------------~~~~hp~~~Ai~~~~~~~~~~~~~---~~-~---~~~~~--------------~ 321 (556)
T TIGR01525 280 -LLALAAALE----------------QSSSHPLARAIVRYAKKRGLELPK---QE-D---VEEVP--------------G 321 (556)
T ss_pred -HHHHHHHHh----------------ccCCChHHHHHHHHHHhcCCCccc---cc-C---eeEec--------------C
Confidence 111111110 112479999999999876543211 00 0 01111 1
Q ss_pred CeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCC
Q psy11770 244 NGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNW 323 (668)
Q Consensus 244 ~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~ 323 (668)
.++..++||+++..+..|+.... ++.. . + + .++..+.++++|+|+++++.
T Consensus 322 ~gi~~~~~g~~~~~lg~~~~~~~-~~~~--~-~----~-~~~~~~~~~~~g~~~~~v~~--------------------- 371 (556)
T TIGR01525 322 KGVEATVDGQEEVRIGNPRLLEL-AAEP--I-S----A-SPDLLNEGESQGKTVVFVAV--------------------- 371 (556)
T ss_pred CeEEEEECCeeEEEEecHHHHhh-cCCC--c-h----h-hHHHHHHHhhCCcEEEEEEE---------------------
Confidence 23344455555555555543210 1110 0 1 1 12345678899999999984
Q ss_pred CcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcC-CEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhh
Q psy11770 324 DDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAG-ITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRV 402 (668)
Q Consensus 324 ~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aG-I~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~ 402 (668)
|.+++|.+.++|+++|+++++|+.|+++| ++++|+|||+..++..+++++|+.
T Consensus 372 --------~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~~lgi~------------------ 425 (556)
T TIGR01525 372 --------DGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAAELGID------------------ 425 (556)
T ss_pred --------CCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHHHhCCC------------------
Confidence 34899999999999999999999999999 999999999999999999999993
Q ss_pred hcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH
Q psy11770 403 RDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK 482 (668)
Q Consensus 403 ~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak 482 (668)
.+|+++.|++|.++++.+ +..++.|+|+|||.||++|++.||+|+++| ++++.++
T Consensus 426 -------------------~~f~~~~p~~K~~~v~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g-~~~~~~~ 480 (556)
T TIGR01525 426 -------------------EVHAELLPEDKLAIVKEL-----QEEGGVVAMVGDGINDAPALAAADVGIAMG-AGSDVAI 480 (556)
T ss_pred -------------------eeeccCCHHHHHHHHHHH-----HHcCCEEEEEECChhHHHHHhhCCEeEEeC-CCCHHHH
Confidence 467889999999999987 445779999999999999999999999999 8999999
Q ss_pred HhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 483 EASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGA 533 (668)
Q Consensus 483 ~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~ 533 (668)
+.||+++.++++..+.+++..||++++++++++.|.+.+|++.+++++.+.
T Consensus 481 ~~Ad~vi~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i~~a~~g~ 531 (556)
T TIGR01525 481 EAADIVLLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAIPLAAGGL 531 (556)
T ss_pred HhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999988776553
No 29
>PRK10671 copA copper exporting ATPase; Provisional
Probab=100.00 E-value=6e-47 Score=442.62 Aligned_cols=379 Identities=25% Similarity=0.340 Sum_probs=298.9
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+++..++++..++|+|+..|+++.++.+++++++++++++|.. .. ....| ...+.+++++++++
T Consensus 414 ~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~---~~----~~~~~--------~~~~~~a~~vlv~a 478 (834)
T PRK10671 414 RIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYF---FG----PAPQI--------VYTLVIATTVLIIA 478 (834)
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hC----CchHH--------HHHHHHHHHHHHHh
Confidence 45566677777899999999999999988888877766655432 11 01112 45677899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||||++++|+++..+..+++|+|+++|+++++|++|++|++|||||||||+|+|+|.++...+. .+++
T Consensus 479 cPcaL~la~p~a~~~~~~~~a~~gilvk~~~~le~l~~v~~v~fDKTGTLT~g~~~v~~~~~~~~----------~~~~- 547 (834)
T PRK10671 479 CPCALGLATPMSIISGVGRAAEFGVLVRDADALQRASTLDTLVFDKTGTLTEGKPQVVAVKTFNG----------VDEA- 547 (834)
T ss_pred cccchhhhHHHHHHHHHHHHHHCCeEEecHHHHHhhcCCCEEEEcCCCccccCceEEEEEEccCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999998764321 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCC-ceEEEEE
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVR-KSMSTVI 240 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~r-k~msvvv 240 (668)
+.+..+.+.+. ...+|.+.|+++++..... +. ..+|+... +.+...
T Consensus 548 -~~l~~a~~~e~-----------------~s~hp~a~Ai~~~~~~~~~---------~~-----~~~~~~~~g~Gv~~~- 594 (834)
T PRK10671 548 -QALRLAAALEQ-----------------GSSHPLARAILDKAGDMTL---------PQ-----VNGFRTLRGLGVSGE- 594 (834)
T ss_pred -HHHHHHHHHhC-----------------CCCCHHHHHHHHHHhhCCC---------CC-----cccceEecceEEEEE-
Confidence 12222222221 1246899999987753211 10 01222111 222222
Q ss_pred eeCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCC
Q psy11770 241 PKKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGD 320 (668)
Q Consensus 241 ~~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~ 320 (668)
.+|+. +.+|+++.+.+.. +..+ + ..+..+++.++|.+++++|+.
T Consensus 595 -~~g~~--~~~G~~~~~~~~~------------~~~~---~-~~~~~~~~~~~g~~~v~va~~----------------- 638 (834)
T PRK10671 595 -AEGHA--LLLGNQALLNEQQ------------VDTK---A-LEAEITAQASQGATPVLLAVD----------------- 638 (834)
T ss_pred -ECCEE--EEEeCHHHHHHcC------------CChH---H-HHHHHHHHHhCCCeEEEEEEC-----------------
Confidence 13432 4569998774321 1111 1 234566788999999999852
Q ss_pred CCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 321 PNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 321 ~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
..++|++++.|+++|+++++|+.|++.|++++|+|||+..++..+++++|+.
T Consensus 639 ------------~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~---------------- 690 (834)
T PRK10671 639 ------------GKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANAIAKEAGID---------------- 690 (834)
T ss_pred ------------CEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCC----------------
Confidence 3789999999999999999999999999999999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.++++..|++|.++++.+ +..++.|+|+|||.||++|++.||+||+|| ++++.
T Consensus 691 ---------------------~~~~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Agvgia~g-~g~~~ 743 (834)
T PRK10671 691 ---------------------EVIAGVLPDGKAEAIKRL-----QSQGRQVAMVGDGINDAPALAQADVGIAMG-GGSDV 743 (834)
T ss_pred ---------------------EEEeCCCHHHHHHHHHHH-----hhcCCEEEEEeCCHHHHHHHHhCCeeEEec-CCCHH
Confidence 368889999999999986 556889999999999999999999999999 89999
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAF 530 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~ 530 (668)
++++||+++.++++++|.++++.||+.+.++++++.|.+.+|++.+.+++
T Consensus 744 a~~~ad~vl~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i~~a~ 793 (834)
T PRK10671 744 AIETAAITLMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGIPIAA 793 (834)
T ss_pred HHHhCCEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999887765
No 30
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=100.00 E-value=4.8e-47 Score=423.62 Aligned_cols=367 Identities=29% Similarity=0.371 Sum_probs=289.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++++.+++|+|+.+|+++.++.+++++++++++++| ...+.+++++++++
T Consensus 183 ~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~------------------------~~~~~~~~svlvva 238 (562)
T TIGR01511 183 QIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW------------------------LFALEFAVTVLIIA 238 (562)
T ss_pred HHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH------------------------HHHHHHHHHHHHHh
Confidence 455666777888999999999999998888777766554432 12577899999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+|++++|+++..+..+++++|+++|+++++|+|+++|+||||||||||+|+|+|.++...+. .+++
T Consensus 239 cPcaL~la~p~a~~~~~~~aa~~gIlik~~~~lE~l~~v~~i~fDKTGTLT~g~~~v~~i~~~~~----------~~~~- 307 (562)
T TIGR01511 239 CPCALGLATPTVIAVATGLAAKNGVLIKDGDALERAANIDTVVFDKTGTLTQGKPTVTDVHVFGD----------RDRT- 307 (562)
T ss_pred ccchhhhHHHHHHHHHHHHHHHCCeEEcChHHHHHhhCCCEEEECCCCCCcCCCEEEEEEecCCC----------CCHH-
Confidence 99999999999999999999999999999999999999999999999999999999999864321 1111
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
+.+..+.+... ...+|.+.|+++++.+.+...... .. .+.+| .+.+...+
T Consensus 308 -~~l~~aa~~e~-----------------~s~HPia~Ai~~~~~~~~~~~~~~----~~---~~~~~----g~Gi~~~~- 357 (562)
T TIGR01511 308 -ELLALAAALEA-----------------GSEHPLAKAIVSYAKEKGITLVEV----SD---FKAIP----GIGVEGTV- 357 (562)
T ss_pred -HHHHHHHHHhc-----------------cCCChHHHHHHHHHHhcCCCcCCC----CC---eEEEC----CceEEEEE-
Confidence 11111111111 123699999999987765432110 00 11111 22333322
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
+++ -+..|+++.+.+. +. .++ ++.++|.+++.++.
T Consensus 358 -~g~--~~~iG~~~~~~~~--------~~--~~~-------------~~~~~g~~~~~~~~------------------- 392 (562)
T TIGR01511 358 -EGT--KIQLGNEKLLGEN--------AI--KID-------------GKAEQGSTSVLVAV------------------- 392 (562)
T ss_pred -CCE--EEEEECHHHHHhC--------CC--CCC-------------hhhhCCCEEEEEEE-------------------
Confidence 232 2445877765321 11 011 12357888887762
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|.+++|.+.++|+++|+++++|++|++.|++++|+|||+..++..+++++|+.
T Consensus 393 ----------~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~lgi~----------------- 445 (562)
T TIGR01511 393 ----------NGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKELGIN----------------- 445 (562)
T ss_pred ----------CCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCc-----------------
Confidence 45899999999999999999999999999999999999999999999999991
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
++++..|++|.++++.+ +.+++.|+|+|||.||++|++.||+||+|| ++++.+
T Consensus 446 ---------------------~~~~~~p~~K~~~v~~l-----~~~~~~v~~VGDg~nD~~al~~A~vgia~g-~g~~~a 498 (562)
T TIGR01511 446 ---------------------VRAEVLPDDKAALIKEL-----QEKGRVVAMVGDGINDAPALAQADVGIAIG-AGTDVA 498 (562)
T ss_pred ---------------------EEccCChHHHHHHHHHH-----HHcCCEEEEEeCCCccHHHHhhCCEEEEeC-CcCHHH
Confidence 46778999999999987 446789999999999999999999999999 899999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
++.||+++.+++++.+.+++..||++++++++++.|.+.+|++.+.+++.+
T Consensus 499 ~~~Advvl~~~~l~~l~~~i~lsr~~~~~i~qn~~~a~~~n~~~i~la~~~ 549 (562)
T TIGR01511 499 IEAADVVLMRNDLNDVATAIDLSRKTLRRIKQNLLWAFGYNVIAIPIAAGV 549 (562)
T ss_pred HhhCCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999988776643
No 31
>KOG0205|consensus
Probab=100.00 E-value=2.2e-48 Score=405.09 Aligned_cols=407 Identities=25% Similarity=0.436 Sum_probs=303.8
Q ss_pred HHHHHHhhhhhh-ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEE----EEEc
Q psy11770 70 FFIVGVTVLVVA-VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQ----AYVC 144 (668)
Q Consensus 70 ~~~~~i~ilv~~-iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~----~~~~ 144 (668)
..+..+.++++. +|.|||.++++.++.|..||+++|.+++++.++|+|+.+|++|+|||||||.|+++|.+ ++..
T Consensus 276 ~~i~nLlvllIGgiPiamPtVlsvTMAiGs~rLaqqgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~ 355 (942)
T KOG0205|consen 276 DGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK 355 (942)
T ss_pred hhhhheheeeecccccccceeeeehhhHHHHHHHhcccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec
Confidence 344445555555 99999999999999999999999999999999999999999999999999999999876 3332
Q ss_pred CEEEecCCCCCCCCHHHHHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCcccee
Q psy11770 145 EVQYKNIPKYEDIPEDIASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFT 224 (668)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~ 224 (668)
|. +++. .++.+... +. ....|..|.|+++.... ..+.+ ..++.+
T Consensus 356 gv-----------~~D~--~~L~A~rA-sr---------------~en~DAID~A~v~~L~d----PKear---a~ikev 399 (942)
T KOG0205|consen 356 GV-----------DKDD--VLLTAARA-SR---------------KENQDAIDAAIVGMLAD----PKEAR---AGIKEV 399 (942)
T ss_pred CC-----------ChHH--HHHHHHHH-hh---------------hcChhhHHHHHHHhhcC----HHHHh---hCceEE
Confidence 21 2221 12222111 10 11235788888876542 33333 345567
Q ss_pred eeeccCCCCceEEEEEee-CCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEe
Q psy11770 225 RVYTFNSVRKSMSTVIPK-KNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYK 303 (668)
Q Consensus 225 ~~~~F~s~rk~msvvv~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k 303 (668)
+.+||++..||.+..+.+ +|+..-.+|||||.|++.|..- . + .++...+.+++|+++|+|.|++|++
T Consensus 400 hF~PFnPV~Krta~ty~d~dG~~~r~sKGAPeqil~l~~~~----~-------~-i~~~vh~~id~~AeRGlRSLgVArq 467 (942)
T KOG0205|consen 400 HFLPFNPVDKRTALTYIDPDGNWHRVSKGAPEQILKLCNED----H-------D-IPERVHSIIDKFAERGLRSLAVARQ 467 (942)
T ss_pred eeccCCccccceEEEEECCCCCEEEecCCChHHHHHHhhcc----C-------c-chHHHHHHHHHHHHhcchhhhhhhh
Confidence 889999999999988877 7778888999999999999631 1 1 1223567889999999999999999
Q ss_pred ecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 304 DFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 304 ~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
..++...+ .-...-.|+|+.-+-||+|.++.++|++...-|++|.|+|||...-++..++++|+
T Consensus 468 ~v~e~~~~----------------~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~VkmitgdqlaI~keTgrrlgm 531 (942)
T KOG0205|consen 468 EVPEKTKE----------------SPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIAKETGRRLGM 531 (942)
T ss_pred cccccccc----------------CCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecchHHHHHHhhhhhhcc
Confidence 87654211 11234689999999999999999999999999999999999999999999999998
Q ss_pred ccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHH
Q psy11770 384 VKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPA 463 (668)
Q Consensus 384 ~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~m 463 (668)
-.+ ...+.++.... .++.+.....++.+++..-|+.+.|++|.++|+.| |..++.|+|+|||+||+|+
T Consensus 532 gtn-----mypss~llG~~--~~~~~~~~~v~elie~adgfAgVfpehKy~iV~~L-----q~r~hi~gmtgdgvndapa 599 (942)
T KOG0205|consen 532 GTN-----MYPSSALLGLG--KDGSMPGSPVDELIEKADGFAGVFPEHKYEIVKIL-----QERKHIVGMTGDGVNDAPA 599 (942)
T ss_pred ccC-----cCCchhhccCC--CCCCCCCCcHHHHhhhccCccccCHHHHHHHHHHH-----hhcCceecccCCCcccchh
Confidence 332 01111111100 01111112233344445668999999999999996 7789999999999999999
Q ss_pred HhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCchhH
Q psy11770 464 LKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIGACAVQDSPLKA 543 (668)
Q Consensus 464 lk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~ 543 (668)
||.||+|||+. .+++.|+.+||+|++....+.+..++..+|.+|.|++.+..|.++..+-.+ +.|.........-|++
T Consensus 600 LKkAdigiava-~atdaar~asdiVltepglSviI~avltSraIfqrmknytiyavsitiriv-~gfml~alIw~~df~p 677 (942)
T KOG0205|consen 600 LKKADIGIAVA-DATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIV-FGFMLIALIWEFDFSP 677 (942)
T ss_pred hcccccceeec-cchhhhcccccEEEcCCCchhhHHHHHHHHHHHHHHhhheeeeehhHHHHH-HHHHHHHHHHHhcCCH
Confidence 99999999999 999999999999999999999999999999999999999999988776654 2222222223334455
Q ss_pred HHHHHHHHHHh
Q psy11770 544 VQMLWVNLIMD 554 (668)
Q Consensus 544 ~~~l~~n~~~~ 554 (668)
...+++-++-|
T Consensus 678 fmvliiailnd 688 (942)
T KOG0205|consen 678 FMVLIIAILND 688 (942)
T ss_pred HHHHHHHHhcC
Confidence 55555444333
No 32
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=100.00 E-value=1.4e-46 Score=418.62 Aligned_cols=363 Identities=25% Similarity=0.354 Sum_probs=285.2
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
|+.+..++.+.+++|+|+.+++++.++.++.+++++++++++.. . . .| ...+.+++++++++
T Consensus 146 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----~--~~--------~~~~~~~~svlv~~ 207 (536)
T TIGR01512 146 KIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGL---L-----K--RW--------PFWVYRALVLLVVA 207 (536)
T ss_pred HHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---h-----c--cc--------HHHHHHHHHHHhhc
Confidence 34556666777899999999999999988887777655543221 0 1 12 12677789999999
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
|||+||+++++++..+..+++|+|+++|+++++|++|+++++|||||||||+|+|+|.+++.. +
T Consensus 208 ~P~aL~la~~~~~~~~~~~~~k~gilik~~~~le~l~~v~~i~fDKTGTLT~~~~~v~~~~~~---------------~- 271 (536)
T TIGR01512 208 SPCALVISAPAAYLSAISAAARHGILIKGGAALEALAKIKTVAFDKTGTLTTGRPKVVDVVPA---------------E- 271 (536)
T ss_pred CccccccchHHHHHHHHHHHHHCCeEEcCcHHHHhhcCCCEEEECCCCCCcCCceEEEEeeHH---------------H-
Confidence 999999999999999999999999999999999999999999999999999999999887520 1
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+..+.+.. ....+|.+.|+++++.+.+ . ... ...+| .+.+...+
T Consensus 272 --~l~~a~~~e-----------------~~~~hp~~~Ai~~~~~~~~-~-------~~~---~~~~~----g~gi~~~~- 316 (536)
T TIGR01512 272 --VLRLAAAAE-----------------QASSHPLARAIVDYARKRE-N-------VES---VEEVP----GEGVRAVV- 316 (536)
T ss_pred --HHHHHHHHh-----------------ccCCCcHHHHHHHHHHhcC-C-------Ccc---eEEec----CCeEEEEE-
Confidence 111111111 1124699999999887543 1 000 11112 12222222
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++.. +..|+++.+.+.. .+.+..+|.+++.++
T Consensus 317 -~g~~--~~ig~~~~~~~~~-------------------------~~~~~~~~~~~~~v~-------------------- 348 (536)
T TIGR01512 317 -DGGE--VRIGNPRSLEAAV-------------------------GARPESAGKTIVHVA-------------------- 348 (536)
T ss_pred -CCeE--EEEcCHHHHhhcC-------------------------CcchhhCCCeEEEEE--------------------
Confidence 3332 2347765442210 013445677776665
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR 400 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~ 400 (668)
.|..++|.+.++|+++|+++++|+.|+++|+ +++|+|||+..++..+++++|+.
T Consensus 349 ---------~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------- 403 (536)
T TIGR01512 349 ---------RDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVARELGID---------------- 403 (536)
T ss_pred ---------ECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------
Confidence 2458999999999999999999999999999 99999999999999999999993
Q ss_pred hhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH
Q psy11770 401 RVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 401 ~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ 480 (668)
.+|++..|++|.++++.+ +..++.|+|+|||.||++|++.||+||++|.++++.
T Consensus 404 ---------------------~~f~~~~p~~K~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~A~vgia~g~~~~~~ 457 (536)
T TIGR01512 404 ---------------------EVHAELLPEDKLEIVKEL-----REKYGPVAMVGDGINDAPALAAADVGIAMGASGSDV 457 (536)
T ss_pred ---------------------hhhhccCcHHHHHHHHHH-----HhcCCEEEEEeCCHHHHHHHHhCCEEEEeCCCccHH
Confidence 356788899999999986 456789999999999999999999999999668899
Q ss_pred HHHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 481 AKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFIG 532 (668)
Q Consensus 481 ak~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~~n~~~~~~~~~~ 532 (668)
++++||+++.++++..+.+++..||++++++++++.|.+.+|++.+.+.+++
T Consensus 458 ~~~~ad~vl~~~~l~~l~~~i~~~r~~~~~i~~nl~~a~~~n~~~i~~a~~G 509 (536)
T TIGR01512 458 AIETADVVLLNDDLSRLPQAIRLARRTRRIVKQNVVIALGIILLLILLALFG 509 (536)
T ss_pred HHHhCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999988887755
No 33
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-39 Score=328.99 Aligned_cols=382 Identities=24% Similarity=0.321 Sum_probs=281.3
Q ss_pred CcccccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhh
Q psy11770 2 KPVEVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVA 81 (668)
Q Consensus 2 k~v~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~ 81 (668)
||....+.++.+|||=+..++-+-.-+.. ..++.+..+. -+..|.. +... .+..-++++++.
T Consensus 199 rMI~LVEgA~R~KTPNEIAL~iLL~~LTl-----iFL~~~~Tl~--p~a~y~~-g~~~----------~i~~LiALlV~L 260 (681)
T COG2216 199 RMIALVEGAERQKTPNEIALTILLSGLTL-----IFLLAVATLY--PFAIYSG-GGAA----------SVTVLVALLVCL 260 (681)
T ss_pred HHHHHhhchhccCChhHHHHHHHHHHHHH-----HHHHHHHhhh--hHHHHcC-CCCc----------CHHHHHHHHHHH
Confidence 56667888889999988776655433322 1111111111 1111110 1111 233455788899
Q ss_pred ccCchHHHHHHHHHHHHHHHhhCCCcccCCchHHhhccccEEEcccccccccCceEEEEEEEcCEEEecCCCCCCCCHHH
Q psy11770 82 VPEGLPLAVTLSLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTAVQAYVCEVQYKNIPKYEDIPEDI 161 (668)
Q Consensus 82 iP~~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~lg~v~~i~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 161 (668)
+|-.+.-.++..=..|+.|+.+.|++.++..++|.+|.||++..|||||+|-|+-.-.+++..+. .+
T Consensus 261 IPTTIGgLLsAIGIAGMdRv~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~g----------v~--- 327 (681)
T COG2216 261 IPTTIGGLLSAIGIAGMDRVTQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVPG----------VS--- 327 (681)
T ss_pred hcccHHHHHHHhhhhhhhHhhhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCCC----------CC---
Confidence 99999888888888899999999999999999999999999999999999988766655554332 11
Q ss_pred HHHHHHHHhhcCCCCcccccCCCCCCCcccccChhHHHHHHHHHHcCCChHHHhhhCCccceeeeeccCCCCceEEEEEe
Q psy11770 162 ASKIVEGISVNSGYTSKIMAPENANELPKQVGNKTECALLGFVVAIGKNYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIP 241 (668)
Q Consensus 162 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~p~e~al~~~~~~~g~~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~ 241 (668)
.+.+..+...++-+. ..|...+++.++++.+......... ......||+.+.|++.+-.+
T Consensus 328 ~~~la~aa~lsSl~D----------------eTpEGrSIV~LA~~~~~~~~~~~~~----~~~~fvpFtA~TRmSGvd~~ 387 (681)
T COG2216 328 EEELADAAQLASLAD----------------ETPEGRSIVELAKKLGIELREDDLQ----SHAEFVPFTAQTRMSGVDLP 387 (681)
T ss_pred HHHHHHHHHHhhhcc----------------CCCCcccHHHHHHHhccCCCccccc----ccceeeecceecccccccCC
Confidence 122333333332211 1255567889998877543321111 01245799988765555433
Q ss_pred eCCeEEEEEcCchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCC
Q psy11770 242 KKNGYRVYTKGASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDP 321 (668)
Q Consensus 242 ~~~~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~ 321 (668)
++ .-+-|||.+.+....+. ++|+. ++ .++...++-++.|-..|+++.
T Consensus 388 -~~--~~irKGA~dai~~~v~~---~~g~~---p~-----~l~~~~~~vs~~GGTPL~V~~------------------- 434 (681)
T COG2216 388 -GG--REIRKGAVDAIRRYVRE---RGGHI---PE-----DLDAAVDEVSRLGGTPLVVVE------------------- 434 (681)
T ss_pred -CC--ceeecccHHHHHHHHHh---cCCCC---CH-----HHHHHHHHHHhcCCCceEEEE-------------------
Confidence 22 45679999999987763 23322 12 245677889999999999873
Q ss_pred CCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHh
Q psy11770 322 NWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRR 401 (668)
Q Consensus 322 ~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~ 401 (668)
|-.++|.+.++|-++|+.+|-+.+||+.|||.+|+||||+.||..||++.|++
T Consensus 435 ----------~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD----------------- 487 (681)
T COG2216 435 ----------NGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD----------------- 487 (681)
T ss_pred ----------CCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-----------------
Confidence 44899999999999999999999999999999999999999999999999994
Q ss_pred hhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHH
Q psy11770 402 VRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVA 481 (668)
Q Consensus 402 ~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~a 481 (668)
...+.++||+|.++++.- |..|+-|+|+|||.||+|+|.+||||+||. +|++.|
T Consensus 488 --------------------dfiAeatPEdK~~~I~~e-----Q~~grlVAMtGDGTNDAPALAqAdVg~AMN-sGTqAA 541 (681)
T COG2216 488 --------------------DFIAEATPEDKLALIRQE-----QAEGRLVAMTGDGTNDAPALAQADVGVAMN-SGTQAA 541 (681)
T ss_pred --------------------hhhhcCChHHHHHHHHHH-----HhcCcEEEEcCCCCCcchhhhhcchhhhhc-cccHHH
Confidence 246889999999999974 788999999999999999999999999999 999999
Q ss_pred HHhcchhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy11770 482 KEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLT 520 (668)
Q Consensus 482 k~~ad~vl~~~~~~~i~~~l~~gR~~~~~i~~~i~~~l~ 520 (668)
|++++++=.|++...+.+.+.-|++..-.=-....|++.
T Consensus 542 kEAaNMVDLDS~PTKlievV~IGKqlLiTRGaLTTFSIA 580 (681)
T COG2216 542 KEAANMVDLDSNPTKLIEVVEIGKQLLITRGALTTFSIA 580 (681)
T ss_pred HHhhcccccCCCccceehHhhhhhhheeecccceeeehh
Confidence 999999999999999999999998776543333444443
No 34
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=99.89 E-value=1.3e-22 Score=200.54 Aligned_cols=97 Identities=41% Similarity=0.658 Sum_probs=89.7
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhH
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQ 411 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~ 411 (668)
++.++|.+.+.|++++++.++|+.|+++|++++|+|||+..++..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 56999999999999999999999999999999999999999999999999992
Q ss_pred HHHhhhcCCcEEEEec--CHhhH--HHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC
Q psy11770 412 NLLDKVWPRLRVLARS--SPSDK--YTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 468 (668)
Q Consensus 412 ~~l~~~~~~~~v~~r~--~p~~K--~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~ 468 (668)
+..++++. +|++| .++++.+ +.+++.|+|+|||.||++|+++||
T Consensus 168 --------~~~v~a~~~~kP~~k~~~~~i~~l-----~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 168 --------DSIVFARVIGKPEPKIFLRIIKEL-----QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp --------SEEEEESHETTTHHHHHHHHHHHH-----TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred --------cccccccccccccchhHHHHHHHH-----hcCCCEEEEEccCHHHHHHHHhCc
Confidence 22589999 99999 8888885 667779999999999999999997
No 35
>PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A ....
Probab=99.68 E-value=5.5e-17 Score=156.05 Aligned_cols=125 Identities=33% Similarity=0.547 Sum_probs=97.7
Q ss_pred CCchhHHHHHHHHHHHhHHHHHHhcccCCCccccccCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCC
Q psy11770 538 DSPLKAVQMLWVNLIMDTLASLALATEMPTPDLLLRKPYGRTKALISKTMMKNIIGQAIYQLVIIFGILFFGDKLLDIPT 617 (668)
Q Consensus 538 ~~~l~~~~~l~~n~~~~~~~~l~l~~~~~~~~l~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (668)
|.|+++.|+||+|+++|.+|+++++.|+|++++|+|+|+++++++++++++..++.+|++++++.++.++.+...++.+.
T Consensus 1 P~Pl~~~qiL~inli~d~~~a~al~~e~~~~~im~r~Pr~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~~~~~ 80 (182)
T PF00689_consen 1 PLPLTPIQILWINLITDLLPALALGFEPPDPDIMKRPPRDPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIFGWDE 80 (182)
T ss_dssp S-SS-HHHHHHHHHTTTHHHHHHGGGSS-STTGGGS---TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHSTCSSS
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHHhcCcchhhhhhccccccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 57999999999999999999999999999999999999999999999999999999999999998887776654333221
Q ss_pred CCCCCCCCcccchhhHHHHHHHHHHHHHHHHhhcccCCcccc--cccccCCC
Q psy11770 618 GRGAEYGSLPTQHFTIIFNTFVLMTLFNEINARKIHGQRNVF--EGLFTTHS 667 (668)
Q Consensus 618 ~~~~~~~~~~~~~~t~~f~~~v~~~~~~~~~~r~~~~~~~~~--~~~~~n~~ 667 (668)
.. ......+++|++|++++++|++|.+++|+.+. +.| .++++|++
T Consensus 81 ~~---~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~--~~~~~~~~~~N~~ 127 (182)
T PF00689_consen 81 ET---NNDNLAQAQTMAFTALVLSQLFNAFNCRSRRR--SVFRFRGIFSNKW 127 (182)
T ss_dssp HH---HTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSS--TCTT-STGGGSHH
T ss_pred cc---chhHHHHHHHHHHHHHHHHHHhhhcccccccc--cceecccccccch
Confidence 10 00113468999999999999999999998654 454 48888975
No 36
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=99.58 E-value=2.3e-14 Score=121.96 Aligned_cols=126 Identities=25% Similarity=0.359 Sum_probs=108.2
Q ss_pred eEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 333 LTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 333 l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
+...+.++---++-++++++|++|++. +++.++|||..-+....|+-.|+...
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~~-------------------------- 71 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPVE-------------------------- 71 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCcee--------------------------
Confidence 466778888889999999999999999 99999999999999999999998321
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee-C-CCccHHHHHhcchhcc
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM-G-ITGTDVAKEASDIILT 490 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam-~-~~~~~~ak~~ad~vl~ 490 (668)
.+++-..|+.|.++++.| +.+++.|+|+|||.||.+||+.||+||+. + .+..+.+.++||+++.
T Consensus 72 ---------rv~a~a~~e~K~~ii~eL-----kk~~~k~vmVGnGaND~laLr~ADlGI~tiq~e~v~~r~l~~ADvvik 137 (152)
T COG4087 72 ---------RVFAGADPEMKAKIIREL-----KKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVLK 137 (152)
T ss_pred ---------eeecccCHHHHHHHHHHh-----cCCCcEEEEecCCcchHHHhhhcccceEEeccCCcchHHHhhchhhhh
Confidence 688999999999999997 55789999999999999999999999984 4 1345667899999998
Q ss_pred cCCchHHHHHH
Q psy11770 491 DDNFSSIVKAV 501 (668)
Q Consensus 491 ~~~~~~i~~~l 501 (668)
+...+.+++
T Consensus 138 --~i~e~ldl~ 146 (152)
T COG4087 138 --EIAEILDLL 146 (152)
T ss_pred --hHHHHHHHh
Confidence 566666554
No 37
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.57 E-value=1.6e-14 Score=148.25 Aligned_cols=71 Identities=27% Similarity=0.303 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|+++|||.||++||+.|++||||+ |+.+.+|++||+|+.+++.+++.++|++
T Consensus 196 sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~vt~~n~~dGva~~i~~ 266 (270)
T PRK10513 196 NKGTGVKSLAEH-LGIKPEEVMAIGDQENDIAMIEYAGVGVAMG-NAIPSVKEVAQFVTKSNLEDGVAFAIEK 266 (270)
T ss_pred ChHHHHHHHHHH-hCCCHHHEEEECCchhhHHHHHhCCceEEec-CccHHHHHhcCeeccCCCcchHHHHHHH
Confidence 688888877665 6888899999999999999999999999999 9999999999999999999999998863
No 38
>PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit
Probab=99.53 E-value=3e-14 Score=119.46 Aligned_cols=71 Identities=37% Similarity=0.624 Sum_probs=59.6
Q ss_pred cccChhHHHHHHHHHHcCC--ChHHHhhhCCccceeeeeccCCCCceEEEEEeeCCeEEEEEcCchHHHHhhcccc
Q psy11770 191 QVGNKTECALLGFVVAIGK--NYQTVRDDLPEEVFTRVYTFNSVRKSMSTVIPKKNGYRVYTKGASEIILKKCSYI 264 (668)
Q Consensus 191 ~~g~p~e~al~~~~~~~g~--~~~~~~~~~~~~~~~~~~~F~s~rk~msvvv~~~~~~~~~~KGa~e~il~~c~~~ 264 (668)
..|+|+|.||+.++.+.|. +....+..+ .+++++||+|+||||+|++++++.+.+|+|||||.|+++|+++
T Consensus 19 ~~G~ptE~ALl~~~~~~g~~~~~~~~~~~~---~~~~~~pF~S~rK~msvv~~~~~~~~~~~KGA~e~il~~Ct~i 91 (91)
T PF13246_consen 19 IIGDPTEKALLRFAKKLGVGIDIKEIRSKY---KIVAEIPFDSERKRMSVVVRNDGKYILYVKGAPEVILDRCTHI 91 (91)
T ss_pred ccCCcCHHHHHHHHHHcCCCCcHHHHHhhc---ceeEEEccCcccceeEEEEeCCCEEEEEcCCChHHHHHhcCCC
Confidence 7899999999999999854 455555554 4588999999999999999944457779999999999999853
No 39
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.49 E-value=2e-13 Score=139.46 Aligned_cols=155 Identities=24% Similarity=0.341 Sum_probs=113.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH--------------------Hhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN--------------------RRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~--------------------~~~~ 403 (668)
++.+.+.++|+++++.|++++++|||+...+..+.+++++.. .++..+|..+. ....
T Consensus 20 ~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~---~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~ 96 (264)
T COG0561 20 TISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDG---PLITFNGALIYNGGELLFQKPLSREDVEELLELLE 96 (264)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCc---cEEEeCCeEEecCCcEEeeecCCHHHHHHHHHHHH
Confidence 389999999999999999999999999999999999999953 23333332110 0000
Q ss_pred cC----------c------------------------------------------hhhhHH---HHhhhcC-CcEEEEec
Q psy11770 404 DN----------N------------------------------------------GEVQQN---LLDKVWP-RLRVLARS 427 (668)
Q Consensus 404 ~~----------~------------------------------------------~~~~~~---~l~~~~~-~~~v~~r~ 427 (668)
+. . .....+ .+.+... ....+.+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s 176 (264)
T COG0561 97 DFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSS 176 (264)
T ss_pred hccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEc
Confidence 00 0 000000 1111111 12223322
Q ss_pred CH---------hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHH
Q psy11770 428 SP---------SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 428 ~p---------~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
.+ .+|...++.+.+. ++...+.|+++||+.||.+||+.|+.||||| |+.+.+|+.||++..+++.+++.
T Consensus 177 ~~~~lei~~~g~~K~~al~~l~~~-lgi~~~~v~afGD~~ND~~Ml~~ag~gvam~-Na~~~~k~~A~~vt~~n~~~Gv~ 254 (264)
T COG0561 177 GPISLDITPKGVSKGYALQRLAKL-LGIKLEEVIAFGDSTNDIEMLEVAGLGVAMG-NADEELKELADYVTTSNDEDGVA 254 (264)
T ss_pred CCceEEEecCCCchHHHHHHHHHH-hCCCHHHeEEeCCccccHHHHHhcCeeeecc-CCCHHHHhhCCcccCCccchHHH
Confidence 22 3799999998774 6888788999999999999999999999999 99999999999998999999999
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
++|++
T Consensus 255 ~~l~~ 259 (264)
T COG0561 255 EALEK 259 (264)
T ss_pred HHHHH
Confidence 99875
No 40
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.48 E-value=2.3e-13 Score=139.69 Aligned_cols=166 Identities=14% Similarity=0.154 Sum_probs=113.2
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccC----CCceEE-eehhh---------
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKP----GEDYLI-LEGKE--------- 397 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~----~~~~i~-~~g~~--------- 397 (668)
|.|++. -...+.+.+.++|++|+++|++++++|||+...+..+.+++|+..+ ++..+. .+++.
T Consensus 10 DGTLl~---~~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~ 86 (272)
T PRK15126 10 DGTLLM---PDHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPAD 86 (272)
T ss_pred CCcCcC---CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHH
Confidence 445553 1335899999999999999999999999999999999999998421 222221 11110
Q ss_pred -HHHh---hhcC-----------------chh-------------------h------------hHH-------HHhhhc
Q psy11770 398 -FNRR---VRDN-----------------NGE-------------------V------------QQN-------LLDKVW 418 (668)
Q Consensus 398 -~~~~---~~~~-----------------~~~-------------------~------------~~~-------~l~~~~ 418 (668)
.... .... ... . ..+ .+.+.+
T Consensus 87 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 166 (272)
T PRK15126 87 VAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEAL 166 (272)
T ss_pred HHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHh
Confidence 0000 0000 000 0 000 011111
Q ss_pred C-CcEE------EEecCHh--hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch--
Q psy11770 419 P-RLRV------LARSSPS--DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI-- 487 (668)
Q Consensus 419 ~-~~~v------~~r~~p~--~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~-- 487 (668)
. ...+ +....|. +|...++.+.+. ++...+.|+++|||.||++||+.|+.||||+ |+.+.+|++||+
T Consensus 167 ~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~-~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm~-Na~~~vK~~A~~~~ 244 (272)
T PRK15126 167 GERAHLCFSATDCLEVLPVGCNKGAALAVLSQH-LGLSLADCMAFGDAMNDREMLGSVGRGFIMG-NAMPQLRAELPHLP 244 (272)
T ss_pred cCCEEEEEcCCcEEEeecCCCChHHHHHHHHHH-hCCCHHHeEEecCCHHHHHHHHHcCCceecc-CChHHHHHhCCCCe
Confidence 1 1111 1122332 699999888765 6888899999999999999999999999999 999999999997
Q ss_pred hcccCCchHHHHHHH
Q psy11770 488 ILTDDNFSSIVKAVM 502 (668)
Q Consensus 488 vl~~~~~~~i~~~l~ 502 (668)
++.+++.+++.++|+
T Consensus 245 v~~~n~edGva~~l~ 259 (272)
T PRK15126 245 VIGHCRNQAVSHYLT 259 (272)
T ss_pred ecCCCcchHHHHHHH
Confidence 777889999999885
No 41
>PRK10976 putative hydrolase; Provisional
Probab=99.47 E-value=3.9e-13 Score=137.52 Aligned_cols=71 Identities=17% Similarity=0.192 Sum_probs=63.9
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc--hhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD--IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad--~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|+++|||.||++||+.|++||||+ |+.+.+|++|| +++.+++.+++.++|++
T Consensus 190 sKg~al~~l~~~-lgi~~~~viafGD~~NDi~Ml~~ag~~vAm~-NA~~~vK~~A~~~~v~~~n~edGVa~~l~~ 262 (266)
T PRK10976 190 SKGHALEAVAKK-LGYSLKDCIAFGDGMNDAEMLSMAGKGCIMG-NAHQRLKDLLPELEVIGSNADDAVPHYLRK 262 (266)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEEcCCcccHHHHHHcCCCeeec-CCcHHHHHhCCCCeecccCchHHHHHHHHH
Confidence 688888887665 6888899999999999999999999999999 99999999988 78888899999998863
No 42
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.46 E-value=4.1e-13 Score=134.24 Aligned_cols=155 Identities=23% Similarity=0.286 Sum_probs=110.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH--------------------HHhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF--------------------NRRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~--------------------~~~~~ 403 (668)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+.. .++..+|..+ .....
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (230)
T PRK01158 20 RLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSG---PVIAENGGVISVGFDGKRIFLGDIEECEKAYSELK 96 (230)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---cEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHH
Confidence 488999999999999999999999999999999999999842 1222222110 00000
Q ss_pred c-----------Cch---------------hhhHHHHhhhcCCcEE-----EEecCHh--hHHHHHHHHHHhhcCCCCCE
Q psy11770 404 D-----------NNG---------------EVQQNLLDKVWPRLRV-----LARSSPS--DKYTLVKGMIDSKISAGREV 450 (668)
Q Consensus 404 ~-----------~~~---------------~~~~~~l~~~~~~~~v-----~~r~~p~--~K~~iv~~l~~~~~~~~~~~ 450 (668)
. ... ....+.++.......+ +....|. +|...++.+.+. ++...+.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~-~~i~~~~ 175 (230)
T PRK01158 97 KRFPEASTSLTKLDPDYRKTEVALRRTVPVEEVRELLEELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAEL-MGIDPEE 175 (230)
T ss_pred HhccccceeeecCCcccccceeeecccccHHHHHHHHHHcCCcEEEEecceEEEEeeCCCChHHHHHHHHHH-hCCCHHH
Confidence 0 000 0000111111111111 1233333 599999988765 6788889
Q ss_pred EEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 451 VAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 451 v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
++++||+.||.+|++.|++|+||+ |+.+.+|++||+++.+++-+++.++|++
T Consensus 176 ~i~~GD~~NDi~m~~~ag~~vam~-Na~~~vk~~a~~v~~~n~~~Gv~~~l~~ 227 (230)
T PRK01158 176 VAAIGDSENDLEMFEVAGFGVAVA-NADEELKEAADYVTEKSYGEGVAEAIEH 227 (230)
T ss_pred EEEECCchhhHHHHHhcCceEEec-CccHHHHHhcceEecCCCcChHHHHHHH
Confidence 999999999999999999999999 9999999999999999999999998863
No 43
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.41 E-value=1.4e-12 Score=129.92 Aligned_cols=154 Identities=21% Similarity=0.251 Sum_probs=107.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH-------------------hhhc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR-------------------RVRD 404 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~-------------------~~~~ 404 (668)
.+.+.+.++|++++++|++++++|||++..+..+++++|+.. .++..+|..+.. ....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~---~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPD---PVIAENGGEISYNEGMDDIFLAYLEEEWFLDIVIA 91 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCC---eEEEecCcEEEeCCCCceEEecccCHHHHHHHHHh
Confidence 488999999999999999999999999999999999999532 122222221100 0000
Q ss_pred C-------------c-----------hhhhHHHHhhhcCCcEE-----EEecCH--hhHHHHHHHHHHhhcCCCCCEEEE
Q psy11770 405 N-------------N-----------GEVQQNLLDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVAV 453 (668)
Q Consensus 405 ~-------------~-----------~~~~~~~l~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~ 453 (668)
. . .+.....++.......+ +....| .+|...++.+.++ ++...+.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~ 170 (225)
T TIGR01482 92 KTFPFSRLKVQYPRRASLVKMRYGIDVDTVREIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEK-LGIKPGETLV 170 (225)
T ss_pred cccchhhhccccccccceEEEeecCCHHHHHHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHH-hCCCHHHEEE
Confidence 0 0 00000111111111111 112222 4799999988765 6778889999
Q ss_pred EcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH----HHHHHH
Q psy11770 454 TGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS----IVKAVM 502 (668)
Q Consensus 454 iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~----i~~~l~ 502 (668)
+||+.||.+|++.|++|+||+ |+.+.+|+.||+++.+++.++ +.+.|+
T Consensus 171 ~GD~~NDi~m~~~ag~~vam~-Na~~~~k~~A~~vt~~~~~~G~~~~v~~~l~ 222 (225)
T TIGR01482 171 CGDSENDIDLFEVPGFGVAVA-NAQPELKEWADYVTESPYGEGGAEAIGEILQ 222 (225)
T ss_pred ECCCHhhHHHHHhcCceEEcC-ChhHHHHHhcCeecCCCCCCcHHHHHHHHHH
Confidence 999999999999999999999 999999999999999888999 766664
No 44
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.41 E-value=1.4e-12 Score=131.84 Aligned_cols=154 Identities=25% Similarity=0.373 Sum_probs=110.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhH------------------H---Hh
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEF------------------N---RR 401 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~------------------~---~~ 401 (668)
..+.+++.++|++++++|++++++|||++..+..+..++++. ...+..+|..+ . ..
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~---~~~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~~~ 90 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGID---DYFICSNGALIDDPKGKILYEKPIDSDDVKKILKY 90 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHC---SEEEEGGGTEEEETTTEEEEEESB-HHHHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccch---hhhcccccceeeecccccchhhheeccchhheeeh
Confidence 458899999999999999999999999999999999999984 22333333211 0 00
Q ss_pred hhcC----------------c--------------------------------------hh---hhHHHHhhhcCCcEEE
Q psy11770 402 VRDN----------------N--------------------------------------GE---VQQNLLDKVWPRLRVL 424 (668)
Q Consensus 402 ~~~~----------------~--------------------------------------~~---~~~~~l~~~~~~~~v~ 424 (668)
.... . .. .....+.+.......+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~~~ 170 (254)
T PF08282_consen 91 LKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLIDV 170 (254)
T ss_dssp HHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTEEE
T ss_pred hhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcceeE
Confidence 0000 0 00 0011222222221122
Q ss_pred E-------ec--CHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCch
Q psy11770 425 A-------RS--SPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFS 495 (668)
Q Consensus 425 ~-------r~--~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~ 495 (668)
. .. ...+|...++.+.+. ++...+.++++||+.||.+||+.|+.||||+ |+++.++..||+++.+++-+
T Consensus 171 ~~~~~~~lei~~~~vsK~~ai~~l~~~-~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am~-na~~~~k~~a~~i~~~~~~~ 248 (254)
T PF08282_consen 171 VRSSPYFLEITPKGVSKGSAIKYLLEY-LGISPEDIIAFGDSENDIEMLELAGYSVAMG-NATPELKKAADYITPSNNDD 248 (254)
T ss_dssp EEEETTEEEEEETTSSHHHHHHHHHHH-HTTSGGGEEEEESSGGGHHHHHHSSEEEEET-TS-HHHHHHSSEEESSGTCT
T ss_pred EEecccceEEeeCCCCHHHHHHHHhhh-cccccceeEEeecccccHhHHhhcCeEEEEc-CCCHHHHHhCCEEecCCCCC
Confidence 2 22 235899999998765 6888899999999999999999999999999 99999999999999988779
Q ss_pred HHHHHH
Q psy11770 496 SIVKAV 501 (668)
Q Consensus 496 ~i~~~l 501 (668)
+++++|
T Consensus 249 gv~~~i 254 (254)
T PF08282_consen 249 GVAKAI 254 (254)
T ss_dssp HHHHHH
T ss_pred hHHHhC
Confidence 998865
No 45
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.40 E-value=4.9e-13 Score=132.18 Aligned_cols=153 Identities=21% Similarity=0.278 Sum_probs=107.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH--------------hhhc--C--
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR--------------RVRD--N-- 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~--------------~~~~--~-- 405 (668)
++.+++.++|++|+++|++++++|||++..+..+++.+++..+ ++..+|..+.. .... .
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~---~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGP---VVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKR 94 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCc---EEEccCcEEEeCCCcEEEecccchhhHHHhhhhh
Confidence 5889999999999999999999999999999999999997422 22222211100 0000 0
Q ss_pred --------c----------hhhhHHHHhhhcC--CcEE-----EEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc
Q psy11770 406 --------N----------GEVQQNLLDKVWP--RLRV-----LAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGT 458 (668)
Q Consensus 406 --------~----------~~~~~~~l~~~~~--~~~v-----~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ 458 (668)
. .....+.+.+... ...+ +.. ....+|...++.+++. ++...+.++++||+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~-~~i~~~~~i~iGDs~ 173 (215)
T TIGR01487 95 FPRDRLSNEYPRASLVIMREGKDVDEVREIIKERGLNLVDSGFAIHIMKKGVDKGVGVEKLKEL-LGIKPEEVAAIGDSE 173 (215)
T ss_pred hhhhhcccccceeEEEEecCCccHHHHHHHHHhCCeEEEecCceEEEecCCCChHHHHHHHHHH-hCCCHHHEEEECCCH
Confidence 0 0000011111111 1111 112 2235899999988765 577778899999999
Q ss_pred cCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 459 NDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 459 ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
||.+|++.|++|+||+ |+.+.+|+.||+++.+++-+++.++|
T Consensus 174 ND~~ml~~ag~~vam~-na~~~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 174 NDIDLFRVVGFKVAVA-NADDQLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHHHHhCCCeEEcC-CccHHHHHhCCEEcCCCCCchhhhhC
Confidence 9999999999999999 99999999999999988888887653
No 46
>PLN02887 hydrolase family protein
Probab=99.40 E-value=1.3e-12 Score=144.70 Aligned_cols=71 Identities=24% Similarity=0.393 Sum_probs=64.1
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVMW 503 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~~ 503 (668)
+|...++.+.+. ++...+.|++||||.||++||+.|++||||| ||.+.+|++||+|+.+++.++|.++|++
T Consensus 507 SKG~ALk~L~e~-lGI~~eeviAFGDs~NDIeMLe~AG~gVAMg-NA~eeVK~~Ad~VT~sNdEDGVA~aLek 577 (580)
T PLN02887 507 SKGNGVKMLLNH-LGVSPDEIMAIGDGENDIEMLQLASLGVALS-NGAEKTKAVADVIGVSNDEDGVADAIYR 577 (580)
T ss_pred CHHHHHHHHHHH-cCCCHHHEEEEecchhhHHHHHHCCCEEEeC-CCCHHHHHhCCEEeCCCCcCHHHHHHHH
Confidence 577777776654 6888889999999999999999999999999 9999999999999999999999998863
No 47
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.37 E-value=2.6e-12 Score=131.97 Aligned_cols=70 Identities=26% Similarity=0.365 Sum_probs=63.3
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
+|...++.+.+. ++...+.+++|||+.||++|++.|++||+|| |+.+.+|+.||+++.+++.+++.++|+
T Consensus 199 ~K~~~l~~l~~~-~gi~~~e~i~~GD~~NDi~m~~~ag~~vamg-na~~~lk~~Ad~v~~~n~~dGv~~~l~ 268 (272)
T PRK10530 199 SKGKRLTQWVEA-QGWSMKNVVAFGDNFNDISMLEAAGLGVAMG-NADDAVKARADLVIGDNTTPSIAEFIY 268 (272)
T ss_pred ChHHHHHHHHHH-cCCCHHHeEEeCCChhhHHHHHhcCceEEec-CchHHHHHhCCEEEecCCCCcHHHHHH
Confidence 688888777654 6778889999999999999999999999999 999999999999999999999999886
No 48
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.24 E-value=5e-11 Score=122.16 Aligned_cols=158 Identities=11% Similarity=0.127 Sum_probs=104.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-----CCCceEEeehh-----------------hHH--
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-----PGEDYLILEGK-----------------EFN-- 399 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~-----~~~~~i~~~g~-----------------~~~-- 399 (668)
.+.+.+.++|++|+++|++++++|||+...+..+++++|+.. .++..+...+. ...
T Consensus 24 ~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i 103 (271)
T PRK03669 24 YDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQV 103 (271)
T ss_pred cCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHH
Confidence 466889999999999999999999999999999999999731 22322221100 000
Q ss_pred -HhhhcC-c-------h----hh---------------------------hHHH---HhhhcC--CcEE-----EEecCH
Q psy11770 400 -RRVRDN-N-------G----EV---------------------------QQNL---LDKVWP--RLRV-----LARSSP 429 (668)
Q Consensus 400 -~~~~~~-~-------~----~~---------------------------~~~~---l~~~~~--~~~v-----~~r~~p 429 (668)
...... . . .. ..+. +.+.+. .+.+ +-...|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iEi~~ 183 (271)
T PRK03669 104 LNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAELGLQFVQGARFWHVLD 183 (271)
T ss_pred HHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHCCCEEEecCeeEEEec
Confidence 000000 0 0 00 0000 000000 1111 112233
Q ss_pred --hhHHHHHHHHHHhhcCC---CCCEEEEEcCCccCHHHHhhCCccEeeCCCcc-HH-----HHHhcchhcccCCchHHH
Q psy11770 430 --SDKYTLVKGMIDSKISA---GREVVAVTGDGTNDGPALKKADVGFAMGITGT-DV-----AKEASDIILTDDNFSSIV 498 (668)
Q Consensus 430 --~~K~~iv~~l~~~~~~~---~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~-~~-----ak~~ad~vl~~~~~~~i~ 498 (668)
.+|...++.+.+. ++. +.+.|+++|||.||++||+.|++||||| ++. +. .+..+|+++...+-+++.
T Consensus 184 ~g~sKg~al~~l~~~-lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM~-~~~~~~~~l~~~~~~~~~~~~~~~~~g~~ 261 (271)
T PRK03669 184 ASAGKDQAANWLIAT-YQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVVK-GLNREGVHLQDDDPARVYRTQREGPEGWR 261 (271)
T ss_pred CCCCHHHHHHHHHHH-HHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEec-CCCCCCcccccccCCceEeccCCCcHHHH
Confidence 3788888887765 677 8899999999999999999999999999 554 32 445799999988999999
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
+++++
T Consensus 262 ~~l~~ 266 (271)
T PRK03669 262 EGLDH 266 (271)
T ss_pred HHHHH
Confidence 98864
No 49
>KOG4383|consensus
Probab=99.22 E-value=8.6e-10 Score=117.42 Aligned_cols=312 Identities=15% Similarity=0.225 Sum_probs=206.8
Q ss_pred CchHHHHhhcccccccCCccccCCHHHHHHHHHHHHHHHhhhcc--eeeEEEEeecccch-----------------hhh
Q psy11770 252 GASEIILKKCSYIYGRNGHLEKFTKDMQGRLVRNVIEPMACDGL--RTISIAYKDFVTDK-----------------AEI 312 (668)
Q Consensus 252 Ga~e~il~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl--Rvl~~A~k~l~~~~-----------------~~~ 312 (668)
|-.+...+.|+.+++ +.+..|+....+++ ..+.|.+..+ .+++||||...-.- ...
T Consensus 698 g~ad~~~eACTdfWd-Gadi~PlSg~dkkk----V~DFY~RaclsG~C~AfaYkP~~caLasqL~GKciEl~~~p~~SkI 772 (1354)
T KOG4383|consen 698 GFADFFEEACTDFWD-GADIIPLSGRDKKK----VKDFYLRACLSGHCLAFAYKPCFCALASQLAGKCIELPLNPEHSKI 772 (1354)
T ss_pred cHHHHHHHHhhhhcC-CceeeecCcchHHH----HHHHHHHHhhcccchheecccHHHHHHHHhCCceEEeccCcccchh
Confidence 566778899999885 45667776655543 2344444433 58889998642110 000
Q ss_pred hh----cc---cC---------CCCCC----Cc--ccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCC
Q psy11770 313 NQ----VH---IE---------GDPNW----DD--ESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDN 370 (668)
Q Consensus 313 ~~----~~---~~---------~~~~~----~~--~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~ 370 (668)
.. .+ ++ .+... .+ -+..-++.+|.|++.+..+.+++....|+.|-++-||++..|-.+
T Consensus 773 ~T~celp~sipikqnar~S~~e~Degige~l~~e~c~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~Ed 852 (1354)
T KOG4383|consen 773 ETACELPHSIPIKQNARESFDEIDEGIGERLADEACDQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKED 852 (1354)
T ss_pred hhhccCCCCCcchhhhhhhhhhhccccceeccHhHHHHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchH
Confidence 00 00 00 00000 00 012236789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCccCCCceEEeehhh------------------------HHHhhhcC-chh-----------------
Q psy11770 371 INTARSIATKCGIVKPGEDYLILEGKE------------------------FNRRVRDN-NGE----------------- 408 (668)
Q Consensus 371 ~~ta~~ia~~~gi~~~~~~~i~~~g~~------------------------~~~~~~~~-~~~----------------- 408 (668)
....+-.|+++|+...+++.+.+..++ +++...++ +++
T Consensus 853 ELkSkVFAEKlGiEaGWNCHISLa~~~d~Pg~e~~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~ 932 (1354)
T KOG4383|consen 853 ELKSKVFAEKLGIEAGWNCHISLAEEEDAPGREAGPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKM 932 (1354)
T ss_pred HHHHHHHHHHhccccccceeEEeccCCCCCcccCCCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCcccccc
Confidence 999999999999988877777664321 11110000 000
Q ss_pred ------------------------hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccC--HH
Q psy11770 409 ------------------------VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND--GP 462 (668)
Q Consensus 409 ------------------------~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND--~~ 462 (668)
..-+.++++..-+-.|..++|+.--++++.+ |..|+++++.|...|- .-
T Consensus 933 dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVPLLV~LFTDcnpeamcEMIeIM-----QE~GEVtcclGS~aN~rNSc 1007 (1354)
T KOG4383|consen 933 DSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVPLLVGLFTDCNPEAMCEMIEIM-----QENGEVTCCLGSCANARNSC 1007 (1354)
T ss_pred ccchhhhcCCCchhhcCcchhhcCcccccccCcceeeeeccCCCHHHHHHHHHHH-----HHcCcEEEEeccccccccce
Confidence 0001112222223468999999999999986 6789999999999884 44
Q ss_pred HHhhCCccEeeCCC------------ccHH-HHHh-----------------cchhcccCCchHHHHHHHHHHHHHHHHH
Q psy11770 463 ALKKADVGFAMGIT------------GTDV-AKEA-----------------SDIILTDDNFSSIVKAVMWGRNVYDSIS 512 (668)
Q Consensus 463 mlk~A~vGIam~~~------------~~~~-ak~~-----------------ad~vl~~~~~~~i~~~l~~gR~~~~~i~ 512 (668)
.+-+||++||+..- ++.. ..++ +|+.......-.+.++|+-+|.....+|
T Consensus 1008 iflkadISialD~l~~~~C~~e~fg~assismaqandglsplQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R 1087 (1354)
T KOG4383|consen 1008 IFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGLSPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFR 1087 (1354)
T ss_pred EEEccceeEEeccCCCccceecccccchhhhhhhhcCCCCceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhH
Confidence 56789999987421 1111 1122 2233322223345677888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhHHHHHH-hcccCCCcccccc
Q psy11770 513 KFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASLA-LATEMPTPDLLLR 573 (668)
Q Consensus 513 ~~i~~~l~~n~~~~~~~~~~~~~~~~~~l~~~~~l~~n~~~~~~~~l~-l~~~~~~~~l~~~ 573 (668)
++++|.++..+....+++++.++..+.-|+-.+++|...+-..+..+. +...++.+.+|-+
T Consensus 1088 ~cfLFiLq~qL~l~Vi~flSc~~~LP~i~s~sdii~lScfc~PlL~i~tL~gk~~hkSii~m 1149 (1354)
T KOG4383|consen 1088 HCFLFILQAQLLLSVIIFLSCFFFLPIIFSHSDIILLSCFCIPLLFIGTLFGKFEHKSIIIM 1149 (1354)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchhccchHHHHHHHHHHHHHHHHHhcCCCccceEEe
Confidence 999999999999999999999988888899999999988766555554 4455555555544
No 50
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.21 E-value=1.2e-10 Score=118.38 Aligned_cols=69 Identities=26% Similarity=0.368 Sum_probs=62.2
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
+|...++.+++. ++...+.++++||+.||++|++.|++|+||+ ++.+.+|+.||+++.+++.+++.++|
T Consensus 188 ~K~~~i~~~~~~-~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~~-na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 188 SKGSALQSLAEA-LGISLEDVIAFGDGMNDIEMLEAAGYGVAMG-NADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred ChHHHHHHHHHH-cCCCHHHEEEeCCcHHhHHHHHhCCceeEec-CchHHHHHhCCEEecCCCCcchhhhC
Confidence 699999988765 6777889999999999999999999999999 99999999999999988888887653
No 51
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.19 E-value=1.1e-10 Score=121.17 Aligned_cols=135 Identities=18% Similarity=0.247 Sum_probs=104.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+.+++|+..--.+.+.+.+..+.. .+
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an~lei~dg~ltg---------------------~v 239 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVANELEIMDGKLTG---------------------NV 239 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEeEEEEECCEEEe---------------------Ee
Confidence 589999999999999999999999999888889999999842111111111000000 00
Q ss_pred EE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 424 LA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 424 ~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.. -+..+.|.+.++.+.++ ++...+.++++|||.||++|++.||+|||| |+.+.+++.||.++..++++++..++-
T Consensus 240 ~g~iv~~k~K~~~L~~la~~-lgi~~~qtIaVGDg~NDl~m~~~AGlgiA~--nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 240 LGDIVDAQYKADTLTRLAQE-YEIPLAQTVAIGDGANDLPMIKAAGLGIAY--HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cCccCCcccHHHHHHHHHHH-cCCChhhEEEEECCHHHHHHHHHCCCeEEe--CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 10 12346789999888665 577888999999999999999999999999 799999999999999888998887764
No 52
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.17 E-value=1.8e-10 Score=117.03 Aligned_cols=72 Identities=18% Similarity=0.103 Sum_probs=61.5
Q ss_pred hhHHHHHHHHHHhhcCCC--CCEEEEEcCCccCHHHHhhCCccEeeCCCcc---HHHHHh--c-chhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAG--REVVAVTGDGTNDGPALKKADVGFAMGITGT---DVAKEA--S-DIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~--~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~---~~ak~~--a-d~vl~~~~~~~i~~~l 501 (668)
..|...++.+.+. ++.. .+.++++||+.||.+|++.|++||||+ |+. +.+|+. | ++++.+++-+|+.++|
T Consensus 175 ~~Kg~ai~~l~~~-~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam~-Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l 252 (256)
T TIGR01486 175 SDKGKAANALKQF-YNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVVP-GPNGPNVSLKPGDPGSFLLTPAPGPEGWREAL 252 (256)
T ss_pred CCHHHHHHHHHHH-HhhcCCCceEEEEcCCHhhHHHHHHCCEEEEeC-CCCCCccccCccCCCcEEEcCCCCcHHHHHHH
Confidence 3788888887665 5777 889999999999999999999999999 887 478886 4 5899899999999988
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
++
T Consensus 253 ~~ 254 (256)
T TIGR01486 253 EH 254 (256)
T ss_pred HH
Confidence 64
No 53
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.13 E-value=2.6e-10 Score=107.04 Aligned_cols=107 Identities=19% Similarity=0.210 Sum_probs=86.3
Q ss_pred HHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCH
Q psy11770 350 PEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSP 429 (668)
Q Consensus 350 ~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p 429 (668)
...|+.|+++|+++.++|+.+...+..+.+.+|+.. .|...
T Consensus 40 ~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~-------------------------------------~f~~~-- 80 (169)
T TIGR02726 40 GMGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKR-------------------------------------FHEGI-- 80 (169)
T ss_pred HHHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcE-------------------------------------EEecC--
Confidence 368999999999999999999999999999999931 11111
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
..|...++.++++ ++...+.+++|||+.||.+|++.|++++||+ |+.+.++.+|++++.+++-++.
T Consensus 81 kpkp~~~~~~~~~-l~~~~~ev~~iGD~~nDi~~~~~ag~~~am~-nA~~~lk~~A~~I~~~~~~~g~ 146 (169)
T TIGR02726 81 KKKTEPYAQMLEE-MNISDAEVCYVGDDLVDLSMMKRVGLAVAVG-DAVADVKEAAAYVTTARGGHGA 146 (169)
T ss_pred CCCHHHHHHHHHH-cCcCHHHEEEECCCHHHHHHHHHCCCeEECc-CchHHHHHhCCEEcCCCCCCCH
Confidence 2334455555443 4777889999999999999999999999999 9999999999999876555443
No 54
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.08 E-value=3.9e-10 Score=113.14 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc----hhcccCCchHHHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD----IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad----~vl~~~~~~~i~~~l~~ 503 (668)
..|...++.++++ ++.....++++||+.||.+|++.+++||+|+ |+.+.+|+.|| ++..+++-+++.++|.+
T Consensus 158 ~~K~~al~~l~~~-~g~~~~~~i~~GD~~nD~~ml~~~~~~iav~-na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~ 233 (236)
T TIGR02471 158 ASKGLALRYLSYR-WGLPLEQILVAGDSGNDEEMLRGLTLGVVVG-NHDPELEGLRHQQRIYFANNPHAFGILEGINH 233 (236)
T ss_pred CChHHHHHHHHHH-hCCCHHHEEEEcCCccHHHHHcCCCcEEEEc-CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHh
Confidence 3789999888765 5777778999999999999999999999999 99999999999 78888888999999864
No 55
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=99.08 E-value=7.5e-10 Score=108.22 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=96.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.++++|.+++++||-...-+..+|+++|+...-.+.+..++..+.. .
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an~l~~~dG~ltG---------------------~ 134 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVANELEIDDGKLTG---------------------R 134 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheeeEEEEeCCEEec---------------------e
Confidence 5789999999999999999999999999999999999999965433333222211111 2
Q ss_pred EEE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcc
Q psy11770 423 VLA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 423 v~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~ 490 (668)
+.. .+..+.|...++.+.++ ++...+.+.++|||.||.|||+.||.++++. +.+..+..|+....
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~-~g~~~~~~~a~gDs~nDlpml~~ag~~ia~n--~~~~l~~~a~~~~~ 200 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAE-LGIPLEETVAYGDSANDLPMLEAAGLPIAVN--PKPKLRALADVRIW 200 (212)
T ss_pred eeeeecCcchHHHHHHHHHHH-cCCCHHHeEEEcCchhhHHHHHhCCCCeEeC--cCHHHHHHHHHhcC
Confidence 232 34557899999887665 4677788999999999999999999999985 66667777776655
No 56
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.08 E-value=8.8e-10 Score=102.58 Aligned_cols=109 Identities=17% Similarity=0.285 Sum_probs=88.7
Q ss_pred HHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhh
Q psy11770 352 AIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSD 431 (668)
Q Consensus 352 ~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~ 431 (668)
+|+.|++.|+++.++||++...+..+.+++|+.. .+.. ...
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~-------------------------------------~~~~--~~~ 76 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITH-------------------------------------LYQG--QSN 76 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCE-------------------------------------EEec--ccc
Confidence 8999999999999999999999999999999831 1111 134
Q ss_pred HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchH-HHHHH
Q psy11770 432 KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSS-IVKAV 501 (668)
Q Consensus 432 K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~-i~~~l 501 (668)
|...++.++++ ++...+.++++||+.||.+|++.|+++++|. ++.+..+..||+++..+.-++ +++++
T Consensus 77 k~~~~~~~~~~-~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v~-~~~~~~~~~a~~i~~~~~~~g~~~~~~ 145 (154)
T TIGR01670 77 KLIAFSDILEK-LALAPENVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLIPRADYVTRIAGGRGAVREVC 145 (154)
T ss_pred hHHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEecC-CcCHHHHHhCCEEecCCCCCcHHHHHH
Confidence 56666666544 5777889999999999999999999999999 888999999999998765444 55554
No 57
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=99.05 E-value=1.4e-09 Score=105.87 Aligned_cols=130 Identities=11% Similarity=0.054 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeeh-hhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEG-KEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.|+.+++.| ++.++||.....+..+++++|+..--.+-+.+++ ..+. . .
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an~l~~~~~g~~t-------------------G--~ 125 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCHKLEIDDSDRVV-------------------G--Y 125 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhceeeEEecCCeeE-------------------C--e
Confidence 57999999999999975 9999999999999999999999422111111111 1000 0 0
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.. ..++.|...++.+. ..+..++++|||.||++|++.||+||++. +.+..+++||-.-.-.+.+.+...+.
T Consensus 126 ~~--~~~~~K~~~l~~l~-----~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~--ak~~~~~~~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 126 QL--RQKDPKRQSVIAFK-----SLYYRVIAAGDSYNDTTMLSEAHAGILFH--APENVIREFPQFPAVHTYEDLKREFL 196 (203)
T ss_pred ee--cCcchHHHHHHHHH-----hhCCCEEEEeCCHHHHHHHHhCCCCEEec--CCHHHHHhCCCCCcccCHHHHHHHHH
Confidence 11 35678999998873 23457999999999999999999999996 66776666665444447888888876
Q ss_pred HH
Q psy11770 503 WG 504 (668)
Q Consensus 503 ~g 504 (668)
++
T Consensus 197 ~~ 198 (203)
T TIGR02137 197 KA 198 (203)
T ss_pred HH
Confidence 54
No 58
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=99.03 E-value=1.3e-09 Score=96.79 Aligned_cols=120 Identities=20% Similarity=0.338 Sum_probs=99.5
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
..|+.|.+.||++.++|||+...+..-|+++|+. .+| .--.
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~-------------------------------------~~~--qG~~ 82 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIK-------------------------------------HLY--QGIS 82 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCc-------------------------------------eee--echH
Confidence 5789999999999999999999999999999993 111 2345
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC----chHHHHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 506 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~----~~~i~~~l~~gR~ 506 (668)
+|....+.|+++ ++...+.|+++||..||.|+++..+.++|+. ++++..++.||+|+.... ++.+.++|..++.
T Consensus 83 dK~~a~~~L~~~-~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~~-dAh~~v~~~a~~Vt~~~GG~GAvREv~dlil~aq~ 160 (170)
T COG1778 83 DKLAAFEELLKK-LNLDPEEVAYVGDDLVDLPVMEKVGLSVAVA-DAHPLLKQRADYVTSKKGGEGAVREVCDLILQAQG 160 (170)
T ss_pred hHHHHHHHHHHH-hCCCHHHhhhhcCccccHHHHHHcCCccccc-ccCHHHHHhhHhhhhccCcchHHHHHHHHHHHccC
Confidence 888888888766 6889999999999999999999999999999 999999999999998554 4445556666666
Q ss_pred HHHHH
Q psy11770 507 VYDSI 511 (668)
Q Consensus 507 ~~~~i 511 (668)
.++-.
T Consensus 161 ~~d~~ 165 (170)
T COG1778 161 KLDEA 165 (170)
T ss_pred cHHHH
Confidence 55543
No 59
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.03 E-value=1.8e-09 Score=110.82 Aligned_cols=70 Identities=17% Similarity=0.154 Sum_probs=60.6
Q ss_pred hHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH----Hhc-chhc--ccCCchHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK----EAS-DIIL--TDDNFSSIVKAVM 502 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak----~~a-d~vl--~~~~~~~i~~~l~ 502 (668)
.|...++.+.+. ++... +.|+++||+.||++|++.|++|++|+ |+.+.+| .+| +.+. ..++-+++.+.|+
T Consensus 190 ~Kg~al~~l~~~-~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam~-NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~ 267 (273)
T PRK00192 190 DKGKAVRWLKEL-YRRQDGVETIALGDSPNDLPMLEAADIAVVVP-GPDGPNPPLLPGIADGEFILASAPGPEGWAEAIN 267 (273)
T ss_pred CHHHHHHHHHHH-HhccCCceEEEEcCChhhHHHHHhCCeeEEeC-CCCCCCcccCccccCCceEEecCCCcHHHHHHHH
Confidence 788888887654 67888 99999999999999999999999999 9999998 666 6777 5667889998885
No 60
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.03 E-value=9.5e-10 Score=109.03 Aligned_cols=133 Identities=20% Similarity=0.261 Sum_probs=98.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++||.....+..+.+.+|+..--++.+..++..+.. .+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~---------------------~~ 143 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFANRLEVEDGKLTG---------------------LV 143 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEeeEEEEECCEEEE---------------------Ee
Confidence 589999999999999999999999999999999999999843211111111100000 00
Q ss_pred EEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCCchHHHHH
Q psy11770 424 LAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~ 500 (668)
... ..+..|..+++.+.++ ++...+.++++||+.+|++|++.||++++++ +.+.++++||+++.++++..+..+
T Consensus 144 ~~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~Di~aa~~ag~~i~~~--~~~~~~~~a~~~i~~~~~~~~~~~ 218 (219)
T TIGR00338 144 EGPIVDASYKGKTLLILLRK-EGISPENTVAVGDGANDLSMIKAAGLGIAFN--AKPKLQQKADICINKKDLTDILPL 218 (219)
T ss_pred cCcccCCcccHHHHHHHHHH-cCCCHHHEEEEECCHHHHHHHHhCCCeEEeC--CCHHHHHhchhccCCCCHHHHHhh
Confidence 111 1233477777766554 4667778999999999999999999999986 678888999999999888877654
No 61
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.96 E-value=2.5e-09 Score=102.60 Aligned_cols=115 Identities=17% Similarity=0.290 Sum_probs=90.9
Q ss_pred HHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHh
Q psy11770 351 EAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPS 430 (668)
Q Consensus 351 ~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~ 430 (668)
.+|+.|+++|+++.++||++...+..+++++|+.. +|. ..+
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~-------------------------------------~f~--g~~ 95 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITH-------------------------------------LYQ--GQS 95 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCce-------------------------------------eec--CCC
Confidence 68999999999999999999999999999999831 111 224
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcchhcccCC----chHHHHHHHHHHH
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDIILTDDN----FSSIVKAVMWGRN 506 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~vl~~~~----~~~i~~~l~~gR~ 506 (668)
+|...++.++++ ++..++.|+++||+.||++|++.|+++++++ ++.+..+..||+++..+. ...+.+.+.+.|.
T Consensus 96 ~k~~~l~~~~~~-~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v~-~~~~~~~~~a~~v~~~~~g~g~~~el~~~i~~~~~ 173 (183)
T PRK09484 96 NKLIAFSDLLEK-LAIAPEQVAYIGDDLIDWPVMEKVGLSVAVA-DAHPLLLPRADYVTRIAGGRGAVREVCDLLLLAQG 173 (183)
T ss_pred cHHHHHHHHHHH-hCCCHHHEEEECCCHHHHHHHHHCCCeEecC-ChhHHHHHhCCEEecCCCCCCHHHHHHHHHHHhcC
Confidence 566777776554 5777889999999999999999999999998 888888999999996443 3444545544443
No 62
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=98.89 E-value=1e-08 Score=103.76 Aligned_cols=159 Identities=12% Similarity=0.159 Sum_probs=106.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHH---------------------
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNR--------------------- 400 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~--------------------- 400 (668)
..+..|.+.+.+++++++|++++++|||+...+..+.+++++..+. -+++-+|..+..
T Consensus 19 ~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~-~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~ 97 (249)
T TIGR01485 19 DNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPD-IWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRD 97 (249)
T ss_pred ChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCC-EEEEcCCceEEeCCCCcCCHHHHHHHhcccCHH
Confidence 3457799999999999999999999999999999999999975442 122222221100
Q ss_pred ----hhhc-------C--c-----------hhhh---HHHHhhhc----CCcEE-EE-----ecCH--hhHHHHHHHHHH
Q psy11770 401 ----RVRD-------N--N-----------GEVQ---QNLLDKVW----PRLRV-LA-----RSSP--SDKYTLVKGMID 441 (668)
Q Consensus 401 ----~~~~-------~--~-----------~~~~---~~~l~~~~----~~~~v-~~-----r~~p--~~K~~iv~~l~~ 441 (668)
.... . . .... ...+.+.. .++.+ .+ ...| ..|...++.+++
T Consensus 98 ~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~ 177 (249)
T TIGR01485 98 IVVAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQ 177 (249)
T ss_pred HHHHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHH
Confidence 0000 0 0 0000 01111111 11211 11 2233 479999988876
Q ss_pred hhcCCCCCEEEEEcCCccCHHHHhh-CCccEeeCCCccHHHHHhcc-------hhcccCCchHHHHHHHH
Q psy11770 442 SKISAGREVVAVTGDGTNDGPALKK-ADVGFAMGITGTDVAKEASD-------IILTDDNFSSIVKAVMW 503 (668)
Q Consensus 442 ~~~~~~~~~v~~iGDg~ND~~mlk~-A~vGIam~~~~~~~ak~~ad-------~vl~~~~~~~i~~~l~~ 503 (668)
. ++...+.|+++||+.||++|++. ++.||+|+ |+.+.+|+.++ ++.....-+|+.+.+.+
T Consensus 178 ~-~~i~~~~~i~~GD~~ND~~ml~~~~~~~va~~-na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~ 245 (249)
T TIGR01485 178 K-LAMEPSQTLVCGDSGNDIELFEIGSVRGVIVS-NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAH 245 (249)
T ss_pred H-cCCCccCEEEEECChhHHHHHHccCCcEEEEC-CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHH
Confidence 5 67788899999999999999998 67999999 99999887654 55666667888888764
No 63
>PLN02382 probable sucrose-phosphatase
Probab=98.75 E-value=7.1e-08 Score=104.06 Aligned_cols=157 Identities=13% Similarity=0.113 Sum_probs=100.8
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHH------------Hhh--------
Q psy11770 344 PVRPEVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFN------------RRV-------- 402 (668)
Q Consensus 344 ~l~~~~~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~------------~~~-------- 402 (668)
++.+....++ +++++.|+.++++|||.+..+..+.++.++..+. -.++.+|.++. ...
T Consensus 28 ~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~-~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~ 106 (413)
T PLN02382 28 NLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPD-ITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREI 106 (413)
T ss_pred chhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCC-EEEEcCCcEEEeCCCCccChhHHHHHhccCChhh
Confidence 3444455555 8899999999999999999999999999987653 12222332110 000
Q ss_pred -----hcC-------c-------------hhhh---HHHHhhhc----CCcEE------EEecCH--hhHHHHHHHHHHh
Q psy11770 403 -----RDN-------N-------------GEVQ---QNLLDKVW----PRLRV------LARSSP--SDKYTLVKGMIDS 442 (668)
Q Consensus 403 -----~~~-------~-------------~~~~---~~~l~~~~----~~~~v------~~r~~p--~~K~~iv~~l~~~ 442 (668)
... . .... ...+.+.. ..+.+ +....| ..|...++.++++
T Consensus 107 v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~ 186 (413)
T PLN02382 107 VVEETSKFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKK 186 (413)
T ss_pred HHHHHhcCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHH
Confidence 000 0 0000 01111111 11121 123333 3699999988765
Q ss_pred hc---CCCCCEEEEEcCCccCHHHHhhCC-ccEeeCCCccHHHHHhcchhc---------ccCCchHHHHHHHH
Q psy11770 443 KI---SAGREVVAVTGDGTNDGPALKKAD-VGFAMGITGTDVAKEASDIIL---------TDDNFSSIVKAVMW 503 (668)
Q Consensus 443 ~~---~~~~~~v~~iGDg~ND~~mlk~A~-vGIam~~~~~~~ak~~ad~vl---------~~~~~~~i~~~l~~ 503 (668)
+ +...+.++++||+.||++||+.++ .||+|+ |+.+.+|+.++.+. .++.-+|+.++|.+
T Consensus 187 -~~~~gi~~~~~iafGDs~NDleMl~~ag~~gvam~-NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~ 258 (413)
T PLN02382 187 -LKAEGKAPVNTLVCGDSGNDAELFSVPDVYGVMVS-NAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGH 258 (413)
T ss_pred -hhhcCCChhcEEEEeCCHHHHHHHhcCCCCEEEEc-CCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHH
Confidence 5 567789999999999999999999 799999 99999997643222 24457788888764
No 64
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.71 E-value=4.6e-08 Score=95.41 Aligned_cols=121 Identities=21% Similarity=0.295 Sum_probs=85.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+++.+|+..--+..+..+..... . + ..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~~~~~~~~g~~----------~--------p--~~ 139 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSNELVFDEKGFI----------Q--------P--DG 139 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEEEEEEcCCCeE----------e--------c--ce
Confidence 58999999999999999999999999999999999999974211111111100000 0 0 01
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASD 486 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad 486 (668)
+....|..|..+++.+.++ ++...+.++++||+.||++|++.||++++++ ......+.++|
T Consensus 140 ~~~~~~~~k~~~~~~~~~~-~~~~~~~~i~iGDs~~D~~~a~~ag~~~a~~-~~~~~~~~a~~ 200 (201)
T TIGR01491 140 IVRVTFDNKGEAVERLKRE-LNPSLTETVAVGDSKNDLPMFEVADISISLG-DEGHADYLAKD 200 (201)
T ss_pred eeEEccccHHHHHHHHHHH-hCCCHHHEEEEcCCHhHHHHHHhcCCeEEEC-CCccchhhccc
Confidence 2224466787777776544 4666788999999999999999999999997 44444444444
No 65
>PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane. ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A ....
Probab=98.70 E-value=2.9e-08 Score=99.21 Aligned_cols=97 Identities=32% Similarity=0.477 Sum_probs=75.1
Q ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhHHHHHHHHHHHHHHHHhhhhhhccC
Q psy11770 5 EVAEKHDEKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWKAIYFREFVRFFIVGVTVLVVAVPE 84 (668)
Q Consensus 5 ~~~~~~~~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ilv~~iP~ 84 (668)
+..+..+.+++++++.+++++..+.++.++++++++++++ .. ....+| ...+..++++++.+||+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~----~~~~~~--------~~~~~~~i~~l~~~~P~ 198 (230)
T PF00122_consen 134 QLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWF---FN----DSGISF--------FKSFLFAISLLIVLIPC 198 (230)
T ss_dssp HHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCH---TG----STTCHC--------CHHHHHHHHHHHHHS-T
T ss_pred cccccccccchhhhhhhHHHHHHHHhcccccchhhhccce---ec----cccccc--------ccccccccceeeeeccc
Confidence 3444556677999999999999998877766665443221 10 123344 45778889999999999
Q ss_pred chHHHHHHHHHHHHHHHhhCCCcccCCchHHh
Q psy11770 85 GLPLAVTLSLAYSVKKMMKDNNLVRHLDACET 116 (668)
Q Consensus 85 ~Lp~~~~~~l~~~~~~l~~~~ilv~~~~~~e~ 116 (668)
+||+++++++..+.++|+++|+++|+++++|+
T Consensus 199 ~l~~~~~~~~~~~~~~~~~~~i~v~~~~a~E~ 230 (230)
T PF00122_consen 199 ALPLALPLSLAIAARRLAKNGIIVKNLSALEA 230 (230)
T ss_dssp THHHHHHHHHHHHHHHHHHTTEEESSTTHHHH
T ss_pred ceeehHHHHHHHHHHHHHHCCEEEeCcccccC
Confidence 99999999999999999999999999999995
No 66
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=98.63 E-value=1.8e-07 Score=92.77 Aligned_cols=42 Identities=24% Similarity=0.218 Sum_probs=37.5
Q ss_pred hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 431 DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 431 ~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
+|...++.+.+. ++...+.|+++||+.||.+||+.|++|||+
T Consensus 179 ~Kg~al~~l~~~-lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 179 SKGKAANWLKAT-YNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred CHHHHHHHHHHH-hCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 688888877665 688899999999999999999999999986
No 67
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=98.61 E-value=1.5e-07 Score=93.37 Aligned_cols=43 Identities=14% Similarity=0.155 Sum_probs=38.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
.+...+++.++|++|+++|++++++|||.+..+..+.+++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3556678999999999999999999999999999999999973
No 68
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=98.59 E-value=3.1e-07 Score=89.94 Aligned_cols=126 Identities=17% Similarity=0.188 Sum_probs=88.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++ +++.++||.....+..+.+++|+...-...+..+++. .+
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~~~~~~~~~------------------------~i 122 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCHSLEVDEDG------------------------MI 122 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcceEEECCCC------------------------eE
Confidence 4689999999999999 9999999999999999999999842111111111110 01
Q ss_pred EE--ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHHHhcch-hcccCCchHHHHH
Q psy11770 424 LA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAKEASDI-ILTDDNFSSIVKA 500 (668)
Q Consensus 424 ~~--r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak~~ad~-vl~~~~~~~i~~~ 500 (668)
.. ...|+.|...++.+ +..+..++|+|||.||.+|.+.|++|+..+ ...+.....+++ ++. ++..+.+.
T Consensus 123 ~~~~~~~p~~k~~~l~~~-----~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~-~~~~~~~~~~~~~~~~--~~~el~~~ 194 (205)
T PRK13582 123 TGYDLRQPDGKRQAVKAL-----KSLGYRVIAAGDSYNDTTMLGEADAGILFR-PPANVIAEFPQFPAVH--TYDELLAA 194 (205)
T ss_pred ECccccccchHHHHHHHH-----HHhCCeEEEEeCCHHHHHHHHhCCCCEEEC-CCHHHHHhCCcccccC--CHHHHHHH
Confidence 00 12467787777765 345678999999999999999999999887 443344455665 444 66766665
Q ss_pred HH
Q psy11770 501 VM 502 (668)
Q Consensus 501 l~ 502 (668)
+.
T Consensus 195 l~ 196 (205)
T PRK13582 195 ID 196 (205)
T ss_pred HH
Confidence 54
No 69
>KOG1615|consensus
Probab=98.52 E-value=1.8e-07 Score=86.02 Aligned_cols=125 Identities=18% Similarity=0.258 Sum_probs=85.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCC--ceEEe-ehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGE--DYLIL-EGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~--~~i~~-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
++.|++++.++.|++.|.++.++||--...+..+|.++||...+- +.+.. +..++... + .
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~~Gk~~gf-------------d----~ 150 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDKDGKYLGF-------------D----T 150 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeeccCCccccc-------------c----c
Confidence 478999999999999999999999999999999999999964221 11111 00010000 0 0
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc-cHHHHHhcchhcc
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG-TDVAKEASDIILT 490 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~-~~~ak~~ad~vl~ 490 (668)
..-. .....|.++++.+++ +.+.+.++|+|||.||.+|...|+.=++.|++- .+..|..++..+.
T Consensus 151 ~~pt--sdsggKa~~i~~lrk---~~~~~~~~mvGDGatDlea~~pa~afi~~~g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 151 NEPT--SDSGGKAEVIALLRK---NYNYKTIVMVGDGATDLEAMPPADAFIGFGGNVIREGVKANAKWYVT 216 (227)
T ss_pred CCcc--ccCCccHHHHHHHHh---CCChheeEEecCCccccccCCchhhhhccCCceEcHhhHhccHHHHH
Confidence 0001 122378999987764 567789999999999999999998877766433 2334555554433
No 70
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=98.51 E-value=5.5e-07 Score=91.71 Aligned_cols=151 Identities=11% Similarity=0.244 Sum_probs=95.0
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcCC--ccCCCceEEe-ehh------------hHH----Hhhh
Q psy11770 344 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCGI--VKPGEDYLIL-EGK------------EFN----RRVR 403 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~gi--~~~~~~~i~~-~g~------------~~~----~~~~ 403 (668)
.+.+++.++|+.|++ .|++++++|||+...+..+.+.+++ ...++..+.- ++. .+. +...
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 567899999999998 7999999999999999988877663 2223222211 110 000 0000
Q ss_pred c--------Cc---------hhhhHH-------HHhhhcCCcEE-----EEecCH--hhHHHHHHHHHHhhcCCCCCEEE
Q psy11770 404 D--------NN---------GEVQQN-------LLDKVWPRLRV-----LARSSP--SDKYTLVKGMIDSKISAGREVVA 452 (668)
Q Consensus 404 ~--------~~---------~~~~~~-------~l~~~~~~~~v-----~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~ 452 (668)
. .. .....+ .+.+......+ +....| .+|...++.+++. ++...+.++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~~~~~g~~~lEi~p~g~~Kg~al~~ll~~-~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQLALQPGKCVVEIKPRGTNKGEAIAAFMQE-APFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCceEEeCCCEEEEeeCCCCCHHHHHHHHHHh-cCCCCCeEE
Confidence 0 00 000011 11111111111 122233 4899999998765 566678899
Q ss_pred EEcCCccCHHHHhhC----CccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 453 VTGDGTNDGPALKKA----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 453 ~iGDg~ND~~mlk~A----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
++||+.||.+|++.+ +.||+|| ++. ..|++.+. +-..+..+|.
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vavg-~a~----~~A~~~l~--~~~~v~~~L~ 241 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKVG-TGA----TQASWRLA--GVPDVWSWLE 241 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEEC-CCC----CcCeEeCC--CHHHHHHHHH
Confidence 999999999999999 9999999 765 34677776 5666665553
No 71
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.34 E-value=2.7e-06 Score=85.37 Aligned_cols=42 Identities=7% Similarity=0.029 Sum_probs=38.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+...+.+.++|++|+++||.++++||+.......+.+++|+.
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCC
Confidence 456788999999999999999999999999999999999984
No 72
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.33 E-value=2.1e-06 Score=83.89 Aligned_cols=111 Identities=17% Similarity=0.161 Sum_probs=80.6
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEe-ehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLIL-EGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~-~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
..++.+++.+.++.+++.|++++++||.....+..+++.+|+..--+.-+.. ++..+..
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~~l~~~~~g~~~g-------------------- 144 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGTRLEESEDGIYTG-------------------- 144 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEecceEEcCCCEEeC--------------------
Confidence 3568999999999999999999999999999999999999984210110111 0000000
Q ss_pred cEEE-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 421 LRVL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 421 ~~v~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.+. ..+.++.|...++.+.++ .+...+.+.++||+.+|.+|++.|+.++++.
T Consensus 145 -~~~~~~~~g~~K~~~l~~~~~~-~~~~~~~~~~~gDs~~D~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 145 -NIDGNNCKGEGKVHALAELLAE-EQIDLKDSYAYGDSISDLPLLSLVGHPYVVN 197 (202)
T ss_pred -CccCCCCCChHHHHHHHHHHHH-cCCCHHHcEeeeCCcccHHHHHhCCCcEEeC
Confidence 000 123567888888877654 3556678999999999999999999999876
No 73
>PTZ00174 phosphomannomutase; Provisional
Probab=98.33 E-value=2.9e-06 Score=85.59 Aligned_cols=54 Identities=20% Similarity=0.291 Sum_probs=44.5
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhhC-CccEeeCCCccHHHHHhcchhc
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKKA-DVGFAMGITGTDVAKEASDIIL 489 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~A-~vGIam~~~~~~~ak~~ad~vl 489 (668)
.+|...++.|.++ .+.|+++|| |.||.+||+.| -.|++++ |+.+.+|..+.++.
T Consensus 187 vsKg~al~~L~~~-----~~eviafGD~~~~~~NDieMl~~~~~~g~~v~-n~~~~~~~~~~~~~ 245 (247)
T PTZ00174 187 WDKTYCLRHLEND-----FKEIHFFGDKTFEGGNDYEIYNDPRTIGHSVK-NPEDTIKILKELFL 245 (247)
T ss_pred CcHHHHHHHHHhh-----hhhEEEEcccCCCCCCcHhhhhcCCCceEEeC-CHHHHHHHHHHHhc
Confidence 4799999988643 578999999 99999999976 5677777 99999998877654
No 74
>PLN02954 phosphoserine phosphatase
Probab=98.31 E-value=5e-06 Score=82.60 Aligned_cols=128 Identities=20% Similarity=0.315 Sum_probs=84.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC--CceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG--EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~--~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
++.|++.+.++.|++.|+++.++||.....+..+++.+|+...+ .+.+..+...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984210 0001111000
Q ss_pred EEEEe------cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhh--CCccEeeCCCc-cHHHHHhcchhcccC
Q psy11770 422 RVLAR------SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK--ADVGFAMGITG-TDVAKEASDIILTDD 492 (668)
Q Consensus 422 ~v~~r------~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~--A~vGIam~~~~-~~~ak~~ad~vl~~~ 492 (668)
.+.+. +....|...++.+.++ ++ .+.++++||+.||+.|.+. ++++++.|... .+.....+|+++.
T Consensus 140 ~~~g~~~~~~~~~~~~K~~~i~~~~~~-~~--~~~~i~iGDs~~Di~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-- 214 (224)
T PLN02954 140 EYAGFDENEPTSRSGGKAEAVQHIKKK-HG--YKTMVMIGDGATDLEARKPGGADLFIGYGGVQVREAVAAKADWFVT-- 214 (224)
T ss_pred cEECccCCCcccCCccHHHHHHHHHHH-cC--CCceEEEeCCHHHHHhhhcCCCCEEEecCCCccCHHHHhcCCEEEC--
Confidence 00000 1223577777776543 22 3579999999999999888 45555555222 2334456888876
Q ss_pred CchHHHHH
Q psy11770 493 NFSSIVKA 500 (668)
Q Consensus 493 ~~~~i~~~ 500 (668)
++..+.++
T Consensus 215 ~~~el~~~ 222 (224)
T PLN02954 215 DFQDLIEV 222 (224)
T ss_pred CHHHHHHh
Confidence 56665543
No 75
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.29 E-value=5e-06 Score=82.03 Aligned_cols=137 Identities=15% Similarity=0.093 Sum_probs=84.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCC-CceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPG-EDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~-~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
-+++|++.+.++.|++.|+++.++||.....+..+.+.++....- .+-...+++.+.... ..+..
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~i~~n~~~~~~~~~~~~~--------------p~~~~ 134 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDRIYCNEADFSNEYIHIDW--------------PHPCD 134 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCcccEEeceeEeeCCeeEEeC--------------CCCCc
Confidence 368999999999999999999999999999999998887542110 000112222111000 00000
Q ss_pred EEEE-ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHHHH--HhcchhcccCCchHHH
Q psy11770 422 RVLA-RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDVAK--EASDIILTDDNFSSIV 498 (668)
Q Consensus 422 ~v~~-r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~ak--~~ad~vl~~~~~~~i~ 498 (668)
.-+. .+ ...|..+++.+ +..++.++|+|||.||.+|++.||++++-+ .-.+..+ ..+.... ++|..+.
T Consensus 135 ~~~~~~c-g~~K~~~l~~~-----~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar~-~l~~~~~~~~~~~~~~--~~f~di~ 205 (214)
T TIGR03333 135 GTCQNQC-GCCKPSLIRKL-----SEPNDYHIVIGDSVTDVEAAKQSDLCFARD-YLLNECEELGLNHAPF--QDFYDVR 205 (214)
T ss_pred cccccCC-CCCHHHHHHHH-----hhcCCcEEEEeCCHHHHHHHHhCCeeEehH-HHHHHHHHcCCCccCc--CCHHHHH
Confidence 0000 11 34688888876 335677899999999999999999988743 2112111 1122222 3677777
Q ss_pred HHHH
Q psy11770 499 KAVM 502 (668)
Q Consensus 499 ~~l~ 502 (668)
+.|.
T Consensus 206 ~~l~ 209 (214)
T TIGR03333 206 KELE 209 (214)
T ss_pred HHHH
Confidence 7664
No 76
>PRK08238 hypothetical protein; Validated
Probab=98.29 E-value=4.7e-05 Score=83.57 Aligned_cols=98 Identities=16% Similarity=0.265 Sum_probs=73.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++|++.+.+++++++|++++++|+.+...+..+++++|+. +.++..++
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlF---d~Vigsd~---------------------------- 120 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLF---DGVFASDG---------------------------- 120 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC---CEEEeCCC----------------------------
Confidence 47899999999999999999999999999999999999982 11211111
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTD 479 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~ 479 (668)
..++.|+.|.+.++.. ++. +.+.++||+.+|.+|++.|+-+++++ .+..
T Consensus 121 ~~~~kg~~K~~~l~~~----l~~--~~~~yvGDS~~Dlp~~~~A~~av~Vn-~~~~ 169 (479)
T PRK08238 121 TTNLKGAAKAAALVEA----FGE--RGFDYAGNSAADLPVWAAARRAIVVG-ASPG 169 (479)
T ss_pred ccccCCchHHHHHHHH----hCc--cCeeEecCCHHHHHHHHhCCCeEEEC-CCHH
Confidence 0134666776655532 232 33578899999999999999999997 4433
No 77
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.28 E-value=4.7e-06 Score=92.79 Aligned_cols=39 Identities=8% Similarity=0.175 Sum_probs=36.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
..+.+.++|+.|+++|++++++|||....+..+++++|+
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl 472 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGI 472 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCC
Confidence 556889999999999999999999999999999999996
No 78
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.25 E-value=5.1e-06 Score=82.28 Aligned_cols=128 Identities=20% Similarity=0.300 Sum_probs=92.1
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
...+-|++++++..|+++|++..++|+++...+..+.+..|+...-..++. +...
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~i~g--~~~~----------------------- 141 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDVIVG--GDDV----------------------- 141 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccceEEc--CCCC-----------------------
Confidence 456889999999999999999999999999999999999999533221111 1100
Q ss_pred EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC---ccEeeCCC-ccHHHHHhcchhcccCCchHH
Q psy11770 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD---VGFAMGIT-GTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 422 ~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~---vGIam~~~-~~~~ak~~ad~vl~~~~~~~i 497 (668)
...+..|.....+.+. ++..++.++||||..+|+.|-+.|+ +||..|.+ ........+|+++. ++..+
T Consensus 142 -~~~KP~P~~l~~~~~~-----~~~~~~~~l~VGDs~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~~~d~vi~--~~~el 213 (220)
T COG0546 142 -PPPKPDPEPLLLLLEK-----LGLDPEEALMVGDSLNDILAAKAAGVPAVGVTWGYNSREELAQAGADVVID--SLAEL 213 (220)
T ss_pred -CCCCcCHHHHHHHHHH-----hCCChhheEEECCCHHHHHHHHHcCCCEEEEECCCCCCcchhhcCCCEEEC--CHHHH
Confidence 0112345555555554 3555568999999999999999999 77887743 34455566888887 67776
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
...+.
T Consensus 214 ~~~l~ 218 (220)
T COG0546 214 LALLA 218 (220)
T ss_pred HHHHh
Confidence 66553
No 79
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=98.24 E-value=2.5e-06 Score=82.36 Aligned_cols=96 Identities=26% Similarity=0.339 Sum_probs=69.9
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEe
Q psy11770 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLAR 426 (668)
Q Consensus 347 ~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r 426 (668)
+++.+.|+.++++|++++++||.....+.++++.+|+... .++..+- ... .......+
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~--~v~~~~~--~~~------------------~~~~~~~~ 149 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDD--NVIGNEL--FDN------------------GGGIFTGR 149 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEG--GEEEEEE--ECT------------------TCCEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCce--EEEEEee--eec------------------ccceeeee
Confidence 7888999999999999999999999999999999999521 1111111 000 01133445
Q ss_pred cCHh---hHHHHHHHHH--HhhcCCCCCEEEEEcCCccCHHHHh
Q psy11770 427 SSPS---DKYTLVKGMI--DSKISAGREVVAVTGDGTNDGPALK 465 (668)
Q Consensus 427 ~~p~---~K~~iv~~l~--~~~~~~~~~~v~~iGDg~ND~~mlk 465 (668)
.++. .|...++.++ ... +.....++++|||.||++|||
T Consensus 150 ~~~~~~~~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 150 ITGSNCGGKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp EEEEEESHHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred ECCCCCCcHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 4444 4999999872 221 457889999999999999996
No 80
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.22 E-value=5.6e-06 Score=80.96 Aligned_cols=129 Identities=19% Similarity=0.370 Sum_probs=83.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC--CccCCCceEEeehhhH--------HHhh---hcC-----
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG--IVKPGEDYLILEGKEF--------NRRV---RDN----- 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~~~g~~~--------~~~~---~~~----- 405 (668)
++.+.+.++|++|++.|++++++|||....+..+.+.++ ++..++..+...++.. .... ...
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 578999999999999999999999999999999988744 3334444333221110 0000 000
Q ss_pred --------------c--------hh----h-hHH---HHhhhc---CCcEEEE------ecCH--hhHHHHHHHHHHhhc
Q psy11770 406 --------------N--------GE----V-QQN---LLDKVW---PRLRVLA------RSSP--SDKYTLVKGMIDSKI 444 (668)
Q Consensus 406 --------------~--------~~----~-~~~---~l~~~~---~~~~v~~------r~~p--~~K~~iv~~l~~~~~ 444 (668)
. .. . ... .+.... ..+.+.. ...| .+|...++.++++ +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~-~ 175 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKE-L 175 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHH-h
Confidence 0 00 0 000 011111 1122221 2233 5899999998765 5
Q ss_pred CCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 445 SAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 445 ~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
+.....++++||+.||.+|++.+++||||
T Consensus 176 ~~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 176 NGKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 66778899999999999999999999997
No 81
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.22 E-value=2.5e-06 Score=81.30 Aligned_cols=103 Identities=22% Similarity=0.244 Sum_probs=73.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh-hHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK-EFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~-~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++++.+.++.+++.|++++++||.....+..+++.+|+..--.+.+..+.+ .+... ...+
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~~~~~~~~g~~~g~---------------~~~~--- 135 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFANRLEFDDNGLLTGP---------------IEGQ--- 135 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheeeeEEECCCCEEeCc---------------cCCc---
Confidence 5799999999999999999999999999999999999984211111111100 00000 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
..+.+..|...++.+.+. ++...+.++++|||.||.+|++.|
T Consensus 136 -~~~~~~~K~~~l~~~~~~-~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 136 -VNPEGECKGKVLKELLEE-SKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred -ccCCcchHHHHHHHHHHH-hCCCHHHEEEEeCCHHHHHHHhcC
Confidence 124567899999887654 345667899999999999999875
No 82
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.21 E-value=9.9e-06 Score=80.49 Aligned_cols=128 Identities=19% Similarity=0.295 Sum_probs=88.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.|++.|+++.++||.....+..+.+.+|+...-.. ++.+..
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~~~~~------------------------- 144 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VIGGDS------------------------- 144 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EEcCCC-------------------------
Confidence 35789999999999999999999999999999999999998432111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEee--CCC-ccHHHHHhcchhcccCCchHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFAM--GIT-GTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIam--~~~-~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
+.+..| +..+++.+.++ ++.+.+.++++||+.||+.+.+.||+ +|.+ |.. ..+.....+++++. ++..+.
T Consensus 145 -~~~~kp--~~~~~~~~~~~-~~~~~~~~i~igD~~~Di~~a~~~g~~~i~v~~g~~~~~~~~~~~~~~~i~--~~~~l~ 218 (226)
T PRK13222 145 -LPNKKP--DPAPLLLACEK-LGLDPEEMLFVGDSRNDIQAARAAGCPSVGVTYGYNYGEPIALSEPDVVID--HFAELL 218 (226)
T ss_pred -CCCCCc--ChHHHHHHHHH-cCCChhheEEECCCHHHHHHHHHCCCcEEEECcCCCCccchhhcCCCEEEC--CHHHHH
Confidence 011122 22334433333 47778899999999999999999997 4444 311 22334456788775 788888
Q ss_pred HHHHH
Q psy11770 499 KAVMW 503 (668)
Q Consensus 499 ~~l~~ 503 (668)
..+.+
T Consensus 219 ~~l~~ 223 (226)
T PRK13222 219 PLLGL 223 (226)
T ss_pred HHHHH
Confidence 77754
No 83
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=98.17 E-value=1.1e-05 Score=79.87 Aligned_cols=104 Identities=23% Similarity=0.264 Sum_probs=71.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEE----eehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLI----LEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~----~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
+++|++.+.++.|++.|+++.++||.....+..+.+++ +.. ..++. .+|+.+... .+
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~--~~i~~n~~~~~~~~~~~~----------------kp 134 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPK--EQIYCNGSDFSGEYITIT----------------WP 134 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCc--CcEEEeEEEecCCeeEEe----------------cc
Confidence 57999999999999999999999999999999999988 632 22221 112111000 00
Q ss_pred CcEE--E-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 420 RLRV--L-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 420 ~~~v--~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.-.. + .++ ...|..+++.+ +..+..++++|||.||++|.+.||+.++
T Consensus 135 ~p~~~~~~~~~-~~~K~~~l~~~-----~~~~~~~i~iGDs~~Di~aa~~Ag~~~a 184 (219)
T PRK09552 135 HPCDEHCQNHC-GCCKPSLIRKL-----SDTNDFHIVIGDSITDLEAAKQADKVFA 184 (219)
T ss_pred CCccccccccC-CCchHHHHHHh-----ccCCCCEEEEeCCHHHHHHHHHCCccee
Confidence 0000 0 001 12477777764 5566789999999999999999999776
No 84
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.10 E-value=1.5e-05 Score=78.11 Aligned_cols=125 Identities=20% Similarity=0.308 Sum_probs=84.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|+++|+++.++||.....+....+.+|+...-+.++ ...+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~i~--~~~~-------------------------- 126 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDHVI--GSDE-------------------------- 126 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheeeEE--ecCc--------------------------
Confidence 678999999999999999999999999999999999999842111110 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCC-CccHHHHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGI-TGTDVAKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~-~~~~~ak~~ad~vl~~~~~~~i~~ 499 (668)
.....| +..+++...++ ++..++.+++|||+.+|+.+-+.+|+.. .-|. +..+..+..+|+++. ++..+..
T Consensus 127 ~~~~KP--~~~~~~~~~~~-~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~~~~~~~~--~~~~l~~ 201 (205)
T TIGR01454 127 VPRPKP--APDIVREALRL-LDVPPEDAVMVGDAVTDLASARAAGTATVAALWGEGDAGELLAARPDFLLR--KPQSLLA 201 (205)
T ss_pred CCCCCC--ChHHHHHHHHH-cCCChhheEEEcCCHHHHHHHHHcCCeEEEEEecCCChhhhhhcCCCeeeC--CHHHHHH
Confidence 001122 23334433332 4777889999999999999999999753 3331 222335567888876 6666655
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 202 ~~ 203 (205)
T TIGR01454 202 LC 203 (205)
T ss_pred Hh
Confidence 44
No 85
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.07 E-value=1.6e-05 Score=71.55 Aligned_cols=117 Identities=19% Similarity=0.185 Sum_probs=75.9
Q ss_pred eecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 340 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 340 ~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.-..++.+++.+.++.|++.|++++++||+....+....+++|+......++..++...... .... ....
T Consensus 20 ~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~--------~~~~ 89 (139)
T cd01427 20 IEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDPVITSNGAAIYYP--KEGL--------FLGG 89 (139)
T ss_pred cccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhheeccchhhhhcc--cccc--------cccc
Confidence 34458899999999999999999999999999999999999998433232222222111100 0000 0001
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC-CccE
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA-DVGF 471 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A-~vGI 471 (668)
....+.+..++.+..+.+. ++...+.++++||+.+|+.|++.+ .-+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~igD~~~d~~~~~~~g~~~i 137 (139)
T cd01427 90 GPFDIGKPNPDKLLAALKL-----LGVDPEEVLMVGDSLNDIEMAKAAGGLGV 137 (139)
T ss_pred cccccCCCCHHHHHHHHHH-----cCCChhhEEEeCCCHHHHHHHHHcCCcee
Confidence 1122334455555555544 355678899999999999999984 4444
No 86
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.03 E-value=8.9e-06 Score=81.89 Aligned_cols=72 Identities=18% Similarity=0.237 Sum_probs=49.5
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCccHH-----HHHhcc----hhcccCCchHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITGTDV-----AKEASD----IILTDDNFSSIVKA 500 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~~~~-----ak~~ad----~vl~~~~~~~i~~~ 500 (668)
..|...++.++.+ ++.+.+.|+++||+.||.+||..++.||.++ |+.+. .....+ |....+.-.||.+.
T Consensus 164 a~K~~Al~~L~~~-~~~~~~~vl~aGDSgND~~mL~~~~~~vvV~-Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIleg 241 (247)
T PF05116_consen 164 ASKGAALRYLMER-WGIPPEQVLVAGDSGNDLEMLEGGDHGVVVG-NAQPELLSWLLEKLRQQERIYFAQGPYAAGILEG 241 (247)
T ss_dssp -SHHHHHHHHHHH-HT--GGGEEEEESSGGGHHHHCCSSEEEE-T-TS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHH
T ss_pred CCHHHHHHHHHHH-hCCCHHHEEEEeCCCCcHHHHcCcCCEEEEc-CCCHHHHHHHHHhcccCCceEecCCCCcHHHHHH
Confidence 5799999998776 6777788899999999999999999999999 88887 222221 33344455667776
Q ss_pred HHH
Q psy11770 501 VMW 503 (668)
Q Consensus 501 l~~ 503 (668)
+.|
T Consensus 242 l~~ 244 (247)
T PF05116_consen 242 LQH 244 (247)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 87
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.02 E-value=1.9e-05 Score=92.09 Aligned_cols=149 Identities=15% Similarity=0.251 Sum_probs=93.2
Q ss_pred CCCCchHHHHHHHHH-cCCEEEEEcCCCHHHHHHHHHHcC--CccCCCceEEeehhhHHH--------------hhhc--
Q psy11770 344 PVRPEVPEAIKKCQR-AGITIRMVTGDNINTARSIATKCG--IVKPGEDYLILEGKEFNR--------------RVRD-- 404 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~-aGI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i~~~g~~~~~--------------~~~~-- 404 (668)
.+.+++.++|++|.+ .|+.|+++|||............+ ++..++..+...+..+.. .+..
T Consensus 514 ~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 514 VPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFV 593 (726)
T ss_pred CCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHH
Confidence 367899999999999 699999999999998888766555 333444433222211100 0000
Q ss_pred ----------C-----------chhhh-------HHHHhhhcC--CcEEE-------EecCHhhHHHHHHHHHHhhcCCC
Q psy11770 405 ----------N-----------NGEVQ-------QNLLDKVWP--RLRVL-------ARSSPSDKYTLVKGMIDSKISAG 447 (668)
Q Consensus 405 ----------~-----------~~~~~-------~~~l~~~~~--~~~v~-------~r~~p~~K~~iv~~l~~~~~~~~ 447 (668)
. +.... ...+..... .+.+. .+....+|...++.+++ +..
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~---~~~ 670 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE---AGP 670 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh---cCC
Confidence 0 00000 011111111 11111 12233589999999876 346
Q ss_pred CCEEEEEcCCccCHHHHhhC---CccEeeCCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 448 REVVAVTGDGTNDGPALKKA---DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 448 ~~~v~~iGDg~ND~~mlk~A---~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.+.++++||+.||.+|++.+ +++|+|| ++ +.+|++.+.++ +.+.++|.
T Consensus 671 ~d~vl~~GD~~nDe~Mf~~~~~~~~~v~vG-~~----~s~A~~~l~~~--~eV~~~L~ 721 (726)
T PRK14501 671 YDFVLAIGDDTTDEDMFRALPETAITVKVG-PG----ESRARYRLPSQ--REVRELLR 721 (726)
T ss_pred CCEEEEECCCCChHHHHHhcccCceEEEEC-CC----CCcceEeCCCH--HHHHHHHH
Confidence 67899999999999999996 6899998 64 56788988843 55666654
No 88
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.98 E-value=2e-05 Score=75.74 Aligned_cols=115 Identities=17% Similarity=0.116 Sum_probs=74.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
-++.+++.+.++.|++.|+++.++|+.....+..+.+..|+...-+.+ +.+..... .++ .+.-...++.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~i--~~~~~~~~----~~g-----~~~~~~~~~~ 139 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIEI--YSNPASFD----NDG-----RHIVWPHHCH 139 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeEE--eccCceEC----CCC-----cEEEecCCCC
Confidence 368999999999999999999999999999999999999984221111 11110000 000 0000000001
Q ss_pred EEEe-cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLAR-SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r-~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+.. .....|..+++.++.. . ++.++++|||.||+.|.+.||+-.|
T Consensus 140 ~~~~~~~g~~K~~~~~~~~~~---~-~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 140 GCCSCPCGCCKGKVIHKLSEP---K-YQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred ccCcCCCCCCHHHHHHHHHhh---c-CceEEEECCCcchhchHhcCCcccc
Confidence 1111 1223588888887532 1 6789999999999999999987654
No 89
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=2.9e-05 Score=79.44 Aligned_cols=125 Identities=15% Similarity=0.209 Sum_probs=84.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.|+.|+++|+++.++||.+...+..+..+.|+...-+. +
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~~--i------------------------------ 147 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFRW--I------------------------------ 147 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCeE--E------------------------------
Confidence 36789999999999999999999999999988888888888321111 0
Q ss_pred EEEecCH--hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccH-HHHHhcchhcccCCchH
Q psy11770 423 VLARSSP--SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTD-VAKEASDIILTDDNFSS 496 (668)
Q Consensus 423 v~~r~~p--~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~-~ak~~ad~vl~~~~~~~ 496 (668)
+.+...+ ..+..+++.+.++ ++..++.+++|||+.||+.+.+.||+. |..|.+..+ .....+|+++. ++..
T Consensus 148 ~~~d~~~~~Kp~p~~~~~~~~~-~g~~~~~~l~IGD~~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~~~~~vi~--~l~e 224 (272)
T PRK13223 148 IGGDTLPQKKPDPAALLFVMKM-AGVPPSQSLFVGDSRSDVLAAKAAGVQCVALSYGYNHGRPIAEESPALVID--DLRA 224 (272)
T ss_pred EecCCCCCCCCCcHHHHHHHHH-hCCChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCchhhhhcCCCEEEC--CHHH
Confidence 1111111 1123344444333 467788999999999999999999963 333322222 23457888886 6777
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.+++.
T Consensus 225 l~~~~~ 230 (272)
T PRK13223 225 LLPGCA 230 (272)
T ss_pred HHHHHh
Confidence 765543
No 90
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=97.96 E-value=5.6e-05 Score=77.19 Aligned_cols=122 Identities=13% Similarity=0.184 Sum_probs=83.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+. ++.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~~--vi~----------------------------- 190 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFSV--VQA----------------------------- 190 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheEE--EEe-----------------------------
Confidence 5789999999999999999999999999999999999998422110 111
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCCCccHH-HHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGITGTDV-AKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~~~~~~-ak~~ad~vl~~~~~~~i~~ 499 (668)
+...+ .|......++++ ++..++.+++|||+.+|+.+-+.||+-. .-|.+..+. ....+|+++. ++..+.+
T Consensus 191 -~~~~~-~k~~~~~~~l~~-~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~~ad~~i~--~~~eL~~ 265 (273)
T PRK13225 191 -GTPIL-SKRRALSQLVAR-EGWQPAAVMYVGDETRDVEAARQVGLIAVAVTWGFNDRQSLVAACPDWLLE--TPSDLLQ 265 (273)
T ss_pred -cCCCC-CCHHHHHHHHHH-hCcChhHEEEECCCHHHHHHHHHCCCeEEEEecCCCCHHHHHHCCCCEEEC--CHHHHHH
Confidence 11111 123344444332 4667788999999999999999999653 333222222 2345888876 6777766
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 266 ~~ 267 (273)
T PRK13225 266 AV 267 (273)
T ss_pred HH
Confidence 55
No 91
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=97.93 E-value=3.3e-05 Score=76.62 Aligned_cols=123 Identities=15% Similarity=0.198 Sum_probs=81.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
-++.|++.++++.|++.|+++.++||........+.+++|+..--+.+ +.+.+.
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~~--~~~~~~------------------------ 144 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDAL--ASAEKL------------------------ 144 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccEE--EEcccC------------------------
Confidence 357899999999999999999999999999999999999984322111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc---cHHHHHhcchhcccCCchHHH
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG---TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~---~~~ak~~ad~vl~~~~~~~i~ 498 (668)
....| +..+.+.+.+. ++...+.++++||+.||+.+-+.||+....-..+ .+.-...+|+++. ++..+.
T Consensus 145 --~~~Kp--~~~~~~~~~~~-~~~~~~~~~~igDs~~Di~aA~~aG~~~i~v~~~~~~~~~~~~~~~~~~~--~~~dl~ 216 (222)
T PRK10826 145 --PYSKP--HPEVYLNCAAK-LGVDPLTCVALEDSFNGMIAAKAARMRSIVVPAPEQQNDPRWALADVKLE--SLTELT 216 (222)
T ss_pred --CCCCC--CHHHHHHHHHH-cCCCHHHeEEEcCChhhHHHHHHcCCEEEEecCCccCchhhhhhhheecc--CHHHHh
Confidence 01122 22344444333 5777889999999999999999999765432122 1122345677765 565553
No 92
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=97.92 E-value=4.2e-05 Score=75.23 Aligned_cols=122 Identities=18% Similarity=0.243 Sum_probs=81.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+..+.++.|+...-+. + +.+.+
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~-~-~~~~~-------------------------- 136 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFSV-L-IGGDS-------------------------- 136 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCcE-E-EecCC--------------------------
Confidence 5789999999999999999999999999999999999998422111 1 11000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-e--CCCc-cHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-M--GITG-TDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m--~~~~-~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..| +.+++..+.++ ++...+.+++|||+.+|+.+.+.||+... + |... .+.....+|+++. ++..+.
T Consensus 137 ~~~~Kp--~p~~~~~~~~~-~~~~~~~~~~igDs~~d~~aa~~aG~~~i~v~~g~~~~~~l~~~~a~~~i~--~~~~l~ 210 (213)
T TIGR01449 137 LAQRKP--HPDPLLLAAER-LGVAPQQMVYVGDSRVDIQAARAAGCPSVLLTYGYRYGEAIDLLPPDVLYD--SLNELP 210 (213)
T ss_pred CCCCCC--ChHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHCCCeEEEEccCCCCCcchhhcCCCeEeC--CHHHHH
Confidence 001122 22334433333 47778889999999999999999996654 2 3111 1223346787776 555544
No 93
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=97.84 E-value=8.1e-05 Score=73.37 Aligned_cols=125 Identities=20% Similarity=0.211 Sum_probs=82.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+.+.+|+...-+.+ +.+.+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~i--~~~~~-------------------------- 133 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDVV--ITLDD-------------------------- 133 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeEE--EecCc--------------------------
Confidence 37899999999999999999999999999999999999984221111 11000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccHH-HHHhcchhcccCCchHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTDV-AKEASDIILTDDNFSSIVK 499 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~~-ak~~ad~vl~~~~~~~i~~ 499 (668)
..+..| |.+.++.+.++ ++...+.+++|||+.+|+.+-+.||+- +.-|....+. ....+|+++. ++..+.+
T Consensus 134 ~~~~Kp--~p~~~~~~~~~-~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~~~~~~i~--~~~~l~~ 208 (214)
T PRK13288 134 VEHAKP--DPEPVLKALEL-LGAKPEEALMVGDNHHDILAGKNAGTKTAGVAWTIKGREYLEQYKPDFMLD--KMSDLLA 208 (214)
T ss_pred CCCCCC--CcHHHHHHHHH-cCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcCCCCCHHHHhhcCcCEEEC--CHHHHHH
Confidence 011112 22233333322 466778999999999999999999974 4334112222 2345787766 6777766
Q ss_pred HH
Q psy11770 500 AV 501 (668)
Q Consensus 500 ~l 501 (668)
++
T Consensus 209 ~i 210 (214)
T PRK13288 209 IV 210 (214)
T ss_pred HH
Confidence 54
No 94
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.75 E-value=0.00013 Score=71.49 Aligned_cols=107 Identities=14% Similarity=0.216 Sum_probs=76.7
Q ss_pred CCCCchHHHHH-HHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIK-KCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~-~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.|++.+.|+ .++++|++++++|+-....+..+++..++... .+++.. +++.. + .+ + .
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~-~~~i~t---~le~~--~-gg------------~-~ 153 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHR-LNLIAS---QIERG--N-GG------------W-V 153 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhcccccc-CcEEEE---EeEEe--C-Cc------------e-E
Confidence 46899999996 78889999999999999999999999766431 222211 11100 0 00 0 0
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.=..|..++|.+-++... ........+-||+.||.|||+.||.++++.
T Consensus 154 ~g~~c~g~~Kv~rl~~~~----~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 154 LPLRCLGHEKVAQLEQKI----GSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred cCccCCChHHHHHHHHHh----CCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 112367789998888763 334456678899999999999999999986
No 95
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=97.75 E-value=0.00013 Score=72.72 Aligned_cols=125 Identities=16% Similarity=0.149 Sum_probs=82.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+...+..+.++.|+...-+ . ++.+.+. -
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~-~-i~~~~~~------------------------~ 148 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA-V-LIGGDTL------------------------A 148 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc-E-EEecCcC------------------------C
Confidence 478999999999999999999999999988888888888842111 1 1111100 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE---eeCCC-cc-HHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF---AMGIT-GT-DVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI---am~~~-~~-~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..|+ ++..+.++ ++..++.+++|||+.+|+.+-+.||+.. .-|.. .. ......+|+++. ++..+.
T Consensus 149 ~~KP~p~----~~~~~~~~-l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~i~--~~~el~ 221 (229)
T PRK13226 149 ERKPHPL----PLLVAAER-IGVAPTDCVYVGDDERDILAARAAGMPSVAALWGYRLHDDDPLAWQADVLVE--QPQLLW 221 (229)
T ss_pred CCCCCHH----HHHHHHHH-hCCChhhEEEeCCCHHHHHHHHHCCCcEEEEeecCCCCCcChhhcCCCeeeC--CHHHHH
Confidence 0122332 33333222 4778899999999999999999999654 23311 11 122345888886 666666
Q ss_pred HHH
Q psy11770 499 KAV 501 (668)
Q Consensus 499 ~~l 501 (668)
+.+
T Consensus 222 ~~~ 224 (229)
T PRK13226 222 NPA 224 (229)
T ss_pred HHh
Confidence 554
No 96
>PRK11590 hypothetical protein; Provisional
Probab=97.72 E-value=0.00025 Score=69.70 Aligned_cols=106 Identities=15% Similarity=0.155 Sum_probs=77.3
Q ss_pred CCCCchHHHH-HHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAI-KKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I-~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.|++.+.| +.+++.|++++++|+.....+..+++.+|+.. ...++..+ +.... .-.
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~-~~~~i~t~---l~~~~-----------------tg~ 153 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLP-RVNLIASQ---MQRRY-----------------GGW 153 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHccccc-cCceEEEE---EEEEE-----------------ccE
Confidence 4589999999 57888999999999999999999999999621 22333221 11000 001
Q ss_pred EE-EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 423 VL-ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 423 v~-~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
+. ..|..++|..-++... +.......+-||+.||.|||+.|+.+++++
T Consensus 154 ~~g~~c~g~~K~~~l~~~~----~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 154 VLTLRCLGHEKVAQLERKI----GTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ECCccCCChHHHHHHHHHh----CCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 11 2367789998888763 345566678899999999999999999986
No 97
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=97.68 E-value=0.00022 Score=72.22 Aligned_cols=96 Identities=19% Similarity=0.167 Sum_probs=66.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++||.....+..+.+++|+..-..+.+ +.+.+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~~f~d~i-i~~~~~~------------------------ 153 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQGYRPDYN-VTTDDVP------------------------ 153 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcCCCCceE-EccccCC------------------------
Confidence 468999999999999999999999999999999999999853211111 1111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v 469 (668)
..+..|+-=....+. ++.. .+.+++|||+.+|+.+-+.||+
T Consensus 154 ~~KP~p~~~~~a~~~-----l~~~~~~~~l~IGDs~~Di~aA~~aGi 195 (253)
T TIGR01422 154 AGRPAPWMALKNAIE-----LGVYDVAACVKVGDTVPDIEEGRNAGM 195 (253)
T ss_pred CCCCCHHHHHHHHHH-----cCCCCchheEEECCcHHHHHHHHHCCC
Confidence 112233322222222 4553 7789999999999999999994
No 98
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.68 E-value=0.00055 Score=69.11 Aligned_cols=140 Identities=14% Similarity=0.164 Sum_probs=83.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++||+.+.++.|++.|+++.++||-....+..+.+++|+..++..+ +-|--.+.. ++.... ...
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~~~I-vSN~L~f~~-----dGvltG-----~~~---- 185 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPNVKV-VSNFMDFDE-----DGVLKG-----FKG---- 185 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcCceE-EeeeEEECC-----CCeEeC-----CCC----
Confidence 57999999999999999999999999999999999999986443222 111000000 000000 000
Q ss_pred EEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCccCHHHHhhC---CccEeeCC-Cc-----cHHHHHhcchhcccC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKKA---DVGFAMGI-TG-----TDVAKEASDIILTDD 492 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND~~mlk~A---~vGIam~~-~~-----~~~ak~~ad~vl~~~ 492 (668)
--+....|.+.+....+..++ .....|+++|||.||++|..-. ..-+.+|- |. -+.-+++-|+|+.+|
T Consensus 186 -P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs~~Dl~ma~g~~~~~~~l~igfln~~~e~~l~~y~~~~Divl~~D 264 (277)
T TIGR01544 186 -PLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDSQGDLRMADGVANVEHILKIGYLNDRVDELLEKYMDSYDIVLVQD 264 (277)
T ss_pred -CcccccccHHHHHHHHHHHhCccCCcceEEEECcChhhhhHhcCCCcccceEEEEecccCHHHHHHHHHHhCCEEEECC
Confidence 001123566655432222234 5677899999999999996654 11222221 22 233567889999866
Q ss_pred CchHHHH
Q psy11770 493 NFSSIVK 499 (668)
Q Consensus 493 ~~~~i~~ 499 (668)
.=-.+..
T Consensus 265 ~t~~v~~ 271 (277)
T TIGR01544 265 ETLEVAN 271 (277)
T ss_pred CCchHHH
Confidence 5333333
No 99
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=97.62 E-value=0.00033 Score=69.33 Aligned_cols=124 Identities=22% Similarity=0.281 Sum_probs=81.1
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc--cCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV--KPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~--~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
.++.+|+.+.++.|+++|+++.++||.....+..+.+.+|+. ..-+ .+.. +.+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~~~~~f~-~i~~-~~~~---------------------- 141 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWTVGDDVD-AVVC-PSDV---------------------- 141 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhhhhccCC-EEEc-CCcC----------------------
Confidence 368999999999999999999999999999999999999984 2111 1111 1100
Q ss_pred cEEEEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCccEe--eCCCcc---HHH-HHhcchhcccCC
Q psy11770 421 LRVLARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADVGFA--MGITGT---DVA-KEASDIILTDDN 493 (668)
Q Consensus 421 ~~v~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~vGIa--m~~~~~---~~a-k~~ad~vl~~~~ 493 (668)
.+..| +..+.....++ ++.. ++.+++|||+.+|+.+-+.||+..+ +. .+. +.. ...+|+++. +
T Consensus 142 ----~~~KP--~p~~~~~a~~~-~~~~~~~~~~~igD~~~Di~aa~~aG~~~~i~~~-~g~~~~~~~~~~~~~~~i~--~ 211 (220)
T TIGR03351 142 ----AAGRP--APDLILRAMEL-TGVQDVQSVAVAGDTPNDLEAGINAGAGAVVGVL-TGAHDAEELSRHPHTHVLD--S 211 (220)
T ss_pred ----CCCCC--CHHHHHHHHHH-cCCCChhHeEEeCCCHHHHHHHHHCCCCeEEEEe-cCCCcHHHHhhcCCceeec--C
Confidence 01122 22333333332 4555 5789999999999999999999862 32 221 122 234666665 5
Q ss_pred chHHHHH
Q psy11770 494 FSSIVKA 500 (668)
Q Consensus 494 ~~~i~~~ 500 (668)
+..+..+
T Consensus 212 ~~~l~~~ 218 (220)
T TIGR03351 212 VADLPAL 218 (220)
T ss_pred HHHHHHh
Confidence 5555443
No 100
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=97.62 E-value=0.00052 Score=63.87 Aligned_cols=112 Identities=19% Similarity=0.187 Sum_probs=73.9
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH---HHHHHc---CCccCCCceEEeehhhHHHhhhcCchhhhHHHHh
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR---SIATKC---GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLD 415 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~---~ia~~~---gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~ 415 (668)
+|.+.+++.+++++++++|++++++|||+...+. ....++ |..-+.+.++..+|..+....
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li~~~g~~~~~~~------------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVLLSPDRLFAALH------------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEEEcCCcchhhhh-------------
Confidence 5788999999999999999999999999988874 555552 321122334444443332110
Q ss_pred hhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 416 KVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 416 ~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
+ .+..+-.-+.|...++.+++...+.....++.+||+.+|+.+-+++++.-
T Consensus 92 ----~-e~i~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~~y~~~gi~~ 142 (157)
T smart00775 92 ----R-EVISKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVISYSAVGIPP 142 (157)
T ss_pred ----c-ccccCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHHHHHHcCCCh
Confidence 0 12222222348888887765322234567788999999999999988653
No 101
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=97.59 E-value=0.00054 Score=70.05 Aligned_cols=101 Identities=15% Similarity=0.092 Sum_probs=67.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.|+.|+++|+++.++||.....+..+.+..|+.....+.+ +.+.+..
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~~~~~d~i-~~~~~~~------------------------ 155 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQGYRPDHV-VTTDDVP------------------------ 155 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhcCCCceEE-EcCCcCC------------------------
Confidence 468999999999999999999999999998888888877642211111 1111000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc---cEeeC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV---GFAMG 474 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v---GIam~ 474 (668)
..+..|+ +.....++ ++.. .+.+++|||+.+|+.+-+.||+ ||.-|
T Consensus 156 ~~KP~p~----~~~~a~~~-l~~~~~~e~l~IGDs~~Di~aA~~aG~~~i~v~~g 205 (267)
T PRK13478 156 AGRPYPW----MALKNAIE-LGVYDVAACVKVDDTVPGIEEGLNAGMWTVGVILS 205 (267)
T ss_pred CCCCChH----HHHHHHHH-cCCCCCcceEEEcCcHHHHHHHHHCCCEEEEEccC
Confidence 0112222 22222222 4554 5789999999999999999995 55544
No 102
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=97.59 E-value=0.00037 Score=70.41 Aligned_cols=115 Identities=12% Similarity=0.106 Sum_probs=77.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++.|+++.++|+.....+....+.+|+...-+. ++.+.+..
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--iv~~~~~~------------------------ 161 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQA--VIIGSECE------------------------ 161 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCcE--EEecCcCC------------------------
Confidence 4689999999999999999999999999999999999998432221 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc---EeeCCCccH-HHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG---FAMGITGTD-VAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG---Iam~~~~~~-~ak~~ad~vl~ 490 (668)
..+..|+--..+.+. ++..++.+++|||+.+|+.+-+.||+- +.-| ...+ .....+|+++.
T Consensus 162 ~~KP~p~~~~~a~~~-----~~~~~~~~l~vgDs~~Di~aA~~aGi~~i~v~~g-~~~~~l~~~~a~~vi~ 226 (248)
T PLN02770 162 HAKPHPDPYLKALEV-----LKVSKDHTFVFEDSVSGIKAGVAAGMPVVGLTTR-NPESLLMEAKPTFLIK 226 (248)
T ss_pred CCCCChHHHHHHHHH-----hCCChhHEEEEcCCHHHHHHHHHCCCEEEEEeCC-CCHHHHhhcCCCEEec
Confidence 012233322233332 477788999999999999999999964 3333 2222 22346788776
No 103
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=97.54 E-value=0.00048 Score=69.88 Aligned_cols=122 Identities=12% Similarity=0.123 Sum_probs=80.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.+.++.|+++|+++.++|+.....+..+.+.+|+...-+.+ +.+.+..
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~i--i~~~d~~------------------------ 162 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSVV--LAAEDVY------------------------ 162 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcEE--EecccCC------------------------
Confidence 46899999999999999999999999999999999999984322211 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE-eeCCCccHHHHHhcchhcccCCchHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF-AMGITGTDVAKEASDIILTDDNFSSIV 498 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI-am~~~~~~~ak~~ad~vl~~~~~~~i~ 498 (668)
..+..|+ +.....++ ++.....+++|||+.+|+.+-+.||+-+ ++...........+|+++. ++..+.
T Consensus 163 ~~KP~Pe----~~~~a~~~-l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g~~~~~~l~~ad~vi~--~~~el~ 231 (260)
T PLN03243 163 RGKPDPE----MFMYAAER-LGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAGKHPVYELSAGDLVVR--RLDDLS 231 (260)
T ss_pred CCCCCHH----HHHHHHHH-hCCChHHeEEEcCCHHHHHHHHHcCCEEEEEecCCchhhhccCCEEeC--CHHHHH
Confidence 0112222 33333222 4778889999999999999999999743 2221233333345677766 555544
No 104
>PLN02580 trehalose-phosphatase
Probab=97.54 E-value=0.00038 Score=73.54 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=50.7
Q ss_pred hhHHHHHHHHHHhhcCCCCC---EEEEEcCCccCHHHHhh-----CCccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGRE---VVAVTGDGTNDGPALKK-----ADVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~---~v~~iGDg~ND~~mlk~-----A~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. ++..+. .++++||+.||..|++. +++||+|| ++... ..|+|.+. +-+.+.++|
T Consensus 300 ~~KG~Av~~Ll~~-~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vg-n~~~~--t~A~y~L~--dp~eV~~~L 373 (384)
T PLN02580 300 WNKGKAVEFLLES-LGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILVS-SVPKE--SNAFYSLR--DPSEVMEFL 373 (384)
T ss_pred CCHHHHHHHHHHh-cCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEEe-cCCCC--ccceEEcC--CHHHHHHHH
Confidence 4999999998765 444433 25899999999999996 68999999 76543 35788887 567777766
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 374 ~ 374 (384)
T PLN02580 374 K 374 (384)
T ss_pred H
Confidence 4
No 105
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=97.52 E-value=0.00011 Score=74.04 Aligned_cols=71 Identities=17% Similarity=0.175 Sum_probs=54.0
Q ss_pred ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC--------CccEeeCCCccHHHHHhcchhcccCCchHH
Q psy11770 426 RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--------DVGFAMGITGTDVAKEASDIILTDDNFSSI 497 (668)
Q Consensus 426 r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A--------~vGIam~~~~~~~ak~~ad~vl~~~~~~~i 497 (668)
+..+.+|...++.++++ ++..+..++++||+.||.+|++.+ +.||+|+ .+ ..+..|++++. +...+
T Consensus 162 ~p~~~~Kg~a~~~~~~~-~~~~~~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v~-~g--~~~~~A~~~~~--~~~~v 235 (244)
T TIGR00685 162 KPRFVNKGEIVKRLLWH-QPGSGISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPIG-SG--SKKTVAKFHLT--GPQQV 235 (244)
T ss_pred eeCCCCHHHHHHHHHHh-cccCCCceEEEcCCCcHHHHHHHHhcccCCCCeEEEEEe-cC--CcCCCceEeCC--CHHHH
Confidence 44566899999988765 466667899999999999999998 4788885 33 23567889887 66667
Q ss_pred HHHHH
Q psy11770 498 VKAVM 502 (668)
Q Consensus 498 ~~~l~ 502 (668)
.+.+.
T Consensus 236 ~~~L~ 240 (244)
T TIGR00685 236 LEFLG 240 (244)
T ss_pred HHHHH
Confidence 66653
No 106
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.45 E-value=0.00053 Score=75.80 Aligned_cols=124 Identities=15% Similarity=0.172 Sum_probs=82.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.....+..+.+.+|+...-+.++ .+++ +
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~i~--~~d~-------------------------v 382 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTETF--SIEQ-------------------------I 382 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcceeE--ecCC-------------------------C
Confidence 678999999999999999999999999999999999999843212111 1110 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCC-CccHHHHHhcchhcccCCchHHHHHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGI-TGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~-~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
-....| .++....++ + +.+.+++|||+.+|+.+-+.||+- |++.. ...+.....+|+++. ++..+.+++
T Consensus 383 ~~~~kP----~~~~~al~~-l--~~~~~v~VGDs~~Di~aAk~AG~~~I~v~~~~~~~~~~~~~d~~i~--~l~el~~~l 453 (459)
T PRK06698 383 NSLNKS----DLVKSILNK-Y--DIKEAAVVGDRLSDINAAKDNGLIAIGCNFDFAQEDELAQADIVID--DLLELKGIL 453 (459)
T ss_pred CCCCCc----HHHHHHHHh-c--CcceEEEEeCCHHHHHHHHHCCCeEEEEeCCCCcccccCCCCEEeC--CHHHHHHHH
Confidence 001123 344433322 2 457899999999999999999963 33321 222222345788876 677777666
Q ss_pred HH
Q psy11770 502 MW 503 (668)
Q Consensus 502 ~~ 503 (668)
.+
T Consensus 454 ~~ 455 (459)
T PRK06698 454 ST 455 (459)
T ss_pred HH
Confidence 43
No 107
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.42 E-value=0.00069 Score=61.12 Aligned_cols=94 Identities=22% Similarity=0.295 Sum_probs=67.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCC--------HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDN--------INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLL 414 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~--------~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l 414 (668)
.++.+++.++++.|+++|++++++|+.. ...+..+.+.+|+.. .....
T Consensus 24 ~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~~---~~~~~--------------------- 79 (132)
T TIGR01662 24 RILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGVPI---DVLYA--------------------- 79 (132)
T ss_pred heeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCCCE---EEEEE---------------------
Confidence 3578999999999999999999999998 777888888888731 11111
Q ss_pred hhhcCCcEEEEecCHhhHHHHHHHHHHhhcC-CCCCEEEEEcC-CccCHHHHhhCCccE
Q psy11770 415 DKVWPRLRVLARSSPSDKYTLVKGMIDSKIS-AGREVVAVTGD-GTNDGPALKKADVGF 471 (668)
Q Consensus 415 ~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~-~~~~~v~~iGD-g~ND~~mlk~A~vGI 471 (668)
+...+..+.++++.++++ ++ .+++.+++||| ..+|+.+-+.+|+-.
T Consensus 80 ----------~~~~~KP~~~~~~~~~~~-~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~ 127 (132)
T TIGR01662 80 ----------CPHCRKPKPGMFLEALKR-FNEIDPEESVYVGDQDLTDLQAAKRAGLAF 127 (132)
T ss_pred ----------CCCCCCCChHHHHHHHHH-cCCCChhheEEEcCCCcccHHHHHHCCCeE
Confidence 000112234455555443 43 67889999999 699999999998643
No 108
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=97.38 E-value=0.00063 Score=79.88 Aligned_cols=164 Identities=13% Similarity=0.173 Sum_probs=95.4
Q ss_pred CeEEEEEEeecCCCCCchHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHH---cCCccCCCceEEeehh-h---------
Q psy11770 332 HLTCLCVIGIEDPVRPEVPEAIKKC-QRAGITIRMVTGDNINTARSIATK---CGIVKPGEDYLILEGK-E--------- 397 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~~~~~~~I~~l-~~aGI~v~~~TGd~~~ta~~ia~~---~gi~~~~~~~i~~~g~-~--------- 397 (668)
|.|++-.....-.+.+++.+++++| ++.|+.|+++|||...+....... +++...++..+...++ .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~ 683 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVAD 683 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhh
Confidence 4455533322335678999999997 788999999999999998887754 4555555544332221 0
Q ss_pred --HHHhh--------hcCc-------------------hhhh-------HHHHhhhcCC--cEE-------EEecCHhhH
Q psy11770 398 --FNRRV--------RDNN-------------------GEVQ-------QNLLDKVWPR--LRV-------LARSSPSDK 432 (668)
Q Consensus 398 --~~~~~--------~~~~-------------------~~~~-------~~~l~~~~~~--~~v-------~~r~~p~~K 432 (668)
+.... .... .... ...+...... ..+ =.+..-.+|
T Consensus 684 ~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnK 763 (854)
T PLN02205 684 CSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSK 763 (854)
T ss_pred HHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCH
Confidence 00000 0000 0000 0011111111 111 122333489
Q ss_pred HHHHHHHHHh--hcCCCCCEEEEEcCCccCHHHHhhCC--------------ccEeeCCCccHHHHHhcchhcccCCchH
Q psy11770 433 YTLVKGMIDS--KISAGREVVAVTGDGTNDGPALKKAD--------------VGFAMGITGTDVAKEASDIILTDDNFSS 496 (668)
Q Consensus 433 ~~iv~~l~~~--~~~~~~~~v~~iGDg~ND~~mlk~A~--------------vGIam~~~~~~~ak~~ad~vl~~~~~~~ 496 (668)
...++.+++. .++...+.|+++||+.||.+|++.++ ++|.+| .+. ..|.+-+. +-..
T Consensus 764 G~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG-~~~----S~A~y~L~--d~~e 836 (854)
T PLN02205 764 GLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG-QKP----SKAKYYLD--DTAE 836 (854)
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC-CCC----ccCeEecC--CHHH
Confidence 9999988642 23455678999999999999999885 566677 332 44566666 4566
Q ss_pred HHHHHH
Q psy11770 497 IVKAVM 502 (668)
Q Consensus 497 i~~~l~ 502 (668)
+.++|.
T Consensus 837 V~~lL~ 842 (854)
T PLN02205 837 IVRLMQ 842 (854)
T ss_pred HHHHHH
Confidence 666653
No 109
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.35 E-value=0.00086 Score=66.56 Aligned_cols=96 Identities=9% Similarity=0.044 Sum_probs=68.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.+...+....+..|+...-+. ++.. .+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~-iv~s-~~-------------------------- 144 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGLDAHLDL-LLST-HT-------------------------- 144 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCcHHHCCE-EEEe-ee--------------------------
Confidence 5789999999999999999999999998888888888887432111 1110 00
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
+.+..| +.++.....++ ++..++.+++|||+.+|+.+-+.||+.
T Consensus 145 ~~~~KP--~p~~~~~~~~~-~~~~p~~~l~igDs~~di~aA~~aG~~ 188 (224)
T PRK14988 145 FGYPKE--DQRLWQAVAEH-TGLKAERTLFIDDSEPILDAAAQFGIR 188 (224)
T ss_pred CCCCCC--CHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHcCCe
Confidence 011122 23344433332 577888999999999999999999996
No 110
>PRK11587 putative phosphatase; Provisional
Probab=97.35 E-value=0.0013 Score=64.99 Aligned_cols=114 Identities=13% Similarity=0.162 Sum_probs=74.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|+++.++|+.....+....+..|+.. .. . ++.+.+..
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~-~~-~-i~~~~~~~------------------------ 135 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPA-PE-V-FVTAERVK------------------------ 135 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCC-cc-E-EEEHHHhc------------------------
Confidence 468999999999999999999999988777777667777721 11 1 22222110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc-EeeCCCcc-HHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG-FAMGITGT-DVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG-Iam~~~~~-~~ak~~ad~vl~ 490 (668)
..+..|+-=....+. ++..++.+++|||+.+|+.+-+.||+. |++. .+. ......+|+++.
T Consensus 136 ~~KP~p~~~~~~~~~-----~g~~p~~~l~igDs~~di~aA~~aG~~~i~v~-~~~~~~~~~~~~~~~~ 198 (218)
T PRK11587 136 RGKPEPDAYLLGAQL-----LGLAPQECVVVEDAPAGVLSGLAAGCHVIAVN-APADTPRLDEVDLVLH 198 (218)
T ss_pred CCCCCcHHHHHHHHH-----cCCCcccEEEEecchhhhHHHHHCCCEEEEEC-CCCchhhhccCCEEec
Confidence 011223222222232 477789999999999999999999974 4444 332 222335666655
No 111
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=97.31 E-value=0.00053 Score=66.58 Aligned_cols=93 Identities=18% Similarity=0.136 Sum_probs=65.4
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
+++.+++.++++.|++.|+++.++||.....+..+.+.+|+..--+.++. +++
T Consensus 105 ~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~~~~~--~~~------------------------- 157 (197)
T TIGR01548 105 DETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLEILFPVQIW--MED------------------------- 157 (197)
T ss_pred cccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCchhhCCEEEe--ecC-------------------------
Confidence 45677789999999999999999999999999999999998432211111 000
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
+..+..|+.-..+.+. ++..++.+++|||+.+|+.+-+.|
T Consensus 158 ~~~KP~p~~~~~~~~~-----~~~~~~~~i~vGD~~~Di~aA~~a 197 (197)
T TIGR01548 158 CPPKPNPEPLILAAKA-----LGVEACHAAMVGDTVDDIITGRKA 197 (197)
T ss_pred CCCCcCHHHHHHHHHH-----hCcCcccEEEEeCCHHHHHHHHhC
Confidence 0112344433333333 467788999999999999887764
No 112
>PRK06769 hypothetical protein; Validated
Probab=97.29 E-value=0.0015 Score=62.07 Aligned_cols=95 Identities=17% Similarity=0.054 Sum_probs=59.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH--------HHHHHHHHcCCccCCCceEE-ee--hhhHHHhhhcCchhhhHHH
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN--------TARSIATKCGIVKPGEDYLI-LE--GKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~--------ta~~ia~~~gi~~~~~~~i~-~~--g~~~~~~~~~~~~~~~~~~ 413 (668)
+.|++.++++.|++.|+++.++|+.... ......+..|+. .++. .. +++.
T Consensus 29 ~~pgv~e~L~~Lk~~G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~~----~~~~~~~~~~~~~--------------- 89 (173)
T PRK06769 29 LFPFTKASLQKLKANHIKIFSFTNQPGIADGIATIADFVQELKGFGFD----DIYLCPHKHGDGC--------------- 89 (173)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEECCchhcCCcCCHHHHHHHHHhCCcC----EEEECcCCCCCCC---------------
Confidence 6799999999999999999999987641 122334445542 1110 00 0000
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-..+..|+-=..+.+. ++...+.+++|||+.+|+.+-+.|++-..
T Consensus 90 ---------~~~KP~p~~~~~~~~~-----l~~~p~~~i~IGD~~~Di~aA~~aGi~~i 134 (173)
T PRK06769 90 ---------ECRKPSTGMLLQAAEK-----HGLDLTQCAVIGDRWTDIVAAAKVNATTI 134 (173)
T ss_pred ---------CCCCCCHHHHHHHHHH-----cCCCHHHeEEEcCCHHHHHHHHHCCCeEE
Confidence 0112223222223332 46778899999999999999999996443
No 113
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=97.25 E-value=0.0027 Score=60.39 Aligned_cols=150 Identities=19% Similarity=0.237 Sum_probs=93.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCc--eEEeehh-----hHHHhhh------cCchhhh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGED--YLILEGK-----EFNRRVR------DNNGEVQ 410 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~--~i~~~g~-----~~~~~~~------~~~~~~~ 410 (668)
++-|++.++++.|++. ...+++|-.-...+..+|.-+|+...+-. -+.++.- +-...+. +..++..
T Consensus 83 ~lvPgA~etm~~l~~~-~tp~v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR~E~L~~~~~~~~~~geel 161 (315)
T COG4030 83 KLVPGAEETMATLQER-WTPVVISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEEREELLSIIDVIASLSGEEL 161 (315)
T ss_pred ccCCChHHHHHHHhcc-CCceEEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHHHHHHHhcCccccccHHHH
Confidence 4679999999999876 44556666667778899999998432111 0111110 0000000 0001101
Q ss_pred HHHHhhhcCCcEEEEecCHh---------------hHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC-cc-Eee
Q psy11770 411 QNLLDKVWPRLRVLARSSPS---------------DKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD-VG-FAM 473 (668)
Q Consensus 411 ~~~l~~~~~~~~v~~r~~p~---------------~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~-vG-Iam 473 (668)
.+.+++ +|.|..|. .|.++++.+.+. .......+++||+..|+.||+.+. -| +|+
T Consensus 162 fe~lDe------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~el--e~~d~sa~~VGDSItDv~ml~~~rgrGglAv 233 (315)
T COG4030 162 FEKLDE------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCEL--EGIDFSAVVVGDSITDVKMLEAARGRGGLAV 233 (315)
T ss_pred HHHHHH------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhh--cCCCcceeEecCcccchHHHHHhhccCceEE
Confidence 111222 34454443 566677666542 334445788999999999999884 33 777
Q ss_pred CCCccHHHHHhcchhcccCCchHHHHHHH
Q psy11770 474 GITGTDVAKEASDIILTDDNFSSIVKAVM 502 (668)
Q Consensus 474 ~~~~~~~ak~~ad~vl~~~~~~~i~~~l~ 502 (668)
.-||.+-+...||+.+.+.+-..+..+|.
T Consensus 234 aFNGNeYal~eAdVAvisp~~~a~~pvie 262 (315)
T COG4030 234 AFNGNEYALKEADVAVISPTAMAEAPVIE 262 (315)
T ss_pred EecCCcccccccceEEeccchhhhhHHHH
Confidence 77899999999999888888888877774
No 114
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=97.20 E-value=0.0031 Score=60.33 Aligned_cols=128 Identities=16% Similarity=0.116 Sum_probs=71.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
.+.|++.+.+++|++.|+++.++|+.+. .....+.++.|+. -..+ ......-
T Consensus 29 ~~~pgv~e~L~~Lk~~g~~l~I~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~--f~~i-~~~~~~~---------- 95 (181)
T PRK08942 29 IPIPGSIEAIARLKQAGYRVVVATNQSGIARGLFTEAQLNALHEKMDWSLADRGGR--LDGI-YYCPHHP---------- 95 (181)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCc--cceE-EECCCCC----------
Confidence 3679999999999999999999998763 1112233344441 0000 0000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eCCCc--cHH-HHHh
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITG--TDV-AKEA 484 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~~~~--~~~-ak~~ 484 (668)
.+..-..+..|+--..+.+. ++...+.+++|||+.+|+.+-+.||+..- +. .+ .+. ....
T Consensus 96 ----------~~~~~~~KP~p~~~~~~~~~-----l~~~~~~~~~VgDs~~Di~~A~~aG~~~i~v~-~g~~~~~~~~~~ 159 (181)
T PRK08942 96 ----------EDGCDCRKPKPGMLLSIAER-----LNIDLAGSPMVGDSLRDLQAAAAAGVTPVLVR-TGKGVTTLAEGA 159 (181)
T ss_pred ----------CCCCcCCCCCHHHHHHHHHH-----cCCChhhEEEEeCCHHHHHHHHHCCCeEEEEc-CCCCchhhhccc
Confidence 00000112223322333332 47778899999999999999999996432 22 22 111 2223
Q ss_pred c--chhcccCCchHHHHHHH
Q psy11770 485 S--DIILTDDNFSSIVKAVM 502 (668)
Q Consensus 485 a--d~vl~~~~~~~i~~~l~ 502 (668)
+ |+++. ++..+.+++.
T Consensus 160 ~~~~~ii~--~l~el~~~l~ 177 (181)
T PRK08942 160 APGTWVLD--SLADLPQALK 177 (181)
T ss_pred CCCceeec--CHHHHHHHHH
Confidence 4 67665 5666666553
No 115
>PLN02423 phosphomannomutase
Probab=97.19 E-value=0.0023 Score=64.38 Aligned_cols=39 Identities=21% Similarity=0.295 Sum_probs=33.4
Q ss_pred hhHHHHHHHHHHhhcCCCCCEEEEEcC----CccCHHHHhh-CCccEeeC
Q psy11770 430 SDKYTLVKGMIDSKISAGREVVAVTGD----GTNDGPALKK-ADVGFAMG 474 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v~~iGD----g~ND~~mlk~-A~vGIam~ 474 (668)
.+|...++.| + ..+.|+++|| |.||.+||+. -=.|+.+.
T Consensus 188 vnKg~al~~L-----~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~ 231 (245)
T PLN02423 188 WDKTYCLQFL-----E-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVT 231 (245)
T ss_pred CCHHHHHHHh-----c-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeC
Confidence 3799999987 3 7889999999 8999999997 66788876
No 116
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=97.14 E-value=0.0014 Score=67.68 Aligned_cols=118 Identities=15% Similarity=0.190 Sum_probs=72.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.|+++.++|+.+......+-+..+..........+.+.+..
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~~~~~~~~~~~~v~~~~~~------------------------ 199 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTLLGPERAQGLDVFAGDDVP------------------------ 199 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhccccccCceEEEeccccC------------------------
Confidence 47899999999999999999999999888887776655321111111111111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeCCCc--cHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMGITG--TDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~~~~--~~~ak~~ad~vl~ 490 (668)
..+..|+-=..+.+. ++..++.+++|||+.+|+.+-+.||+.+..-..+ .+.....+|+++.
T Consensus 200 ~~KP~p~~~~~a~~~-----~~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~g~~~~~~l~~ad~vi~ 263 (286)
T PLN02779 200 KKKPDPDIYNLAAET-----LGVDPSRCVVVEDSVIGLQAAKAAGMRCIVTKSSYTADEDFSGADAVFD 263 (286)
T ss_pred CCCCCHHHHHHHHHH-----hCcChHHEEEEeCCHHhHHHHHHcCCEEEEEccCCccccccCCCcEEEC
Confidence 011222222223332 4677889999999999999999999665432122 1111234677765
No 117
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=97.11 E-value=0.0019 Score=62.76 Aligned_cols=97 Identities=14% Similarity=0.261 Sum_probs=68.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++|+-+...+....+.+|+...-+.+ +.+++.
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl~~~fd~i--~~s~~~------------------------- 144 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGLDDPFDAV--LSADAV------------------------- 144 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCChhhhhee--Eehhhc-------------------------
Confidence 47899999999999999999999999999999999999984221111 111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
....|. ..+.+...++ ++...+.+++|||+.+|+.+-+.||+-.
T Consensus 145 -~~~KP~--~~~~~~~~~~-~~~~p~~~~~vgD~~~Di~~A~~~G~~~ 188 (198)
T TIGR01428 145 -RAYKPA--PQVYQLALEA-LGVPPDEVLFVASNPWDLGGAKKFGFKT 188 (198)
T ss_pred -CCCCCC--HHHHHHHHHH-hCCChhhEEEEeCCHHHHHHHHHCCCcE
Confidence 111232 2233333222 4777889999999999999999999754
No 118
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.07 E-value=0.0021 Score=63.82 Aligned_cols=89 Identities=19% Similarity=0.255 Sum_probs=61.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC----HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN----INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~----~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.+.+++.+.++.+++.|+++.++|||. ..++..+.+..|+...+...+++.|+.
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gip~~~~f~vil~gd~---------------------- 171 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHIPADNMNPVIFAGDK---------------------- 171 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCCCcccceeEEEcCCC----------------------
Confidence 467889999999999999999999975 568889998899831111111111110
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
....+|...++. ...++++||..+|..+-+.||+-
T Consensus 172 -------~~K~~K~~~l~~---------~~i~I~IGDs~~Di~aA~~AGi~ 206 (237)
T PRK11009 172 -------PGQYTKTQWLKK---------KNIRIFYGDSDNDITAAREAGAR 206 (237)
T ss_pred -------CCCCCHHHHHHh---------cCCeEEEcCCHHHHHHHHHcCCc
Confidence 011344443332 12488999999999999999954
No 119
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=97.02 E-value=0.0039 Score=66.07 Aligned_cols=120 Identities=13% Similarity=0.123 Sum_probs=79.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.||+.+.++.|+++|+++.++|+.....+..+.+.+|+..--+.+ +.+.+.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~I--v~sddv------------------------- 268 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSVI--VAAEDV------------------------- 268 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceEE--EecCcC-------------------------
Confidence 46799999999999999999999999999999999999984221111 111100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe-eCCCccHHH-HHhcchhcccCCchHH
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA-MGITGTDVA-KEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa-m~~~~~~~a-k~~ad~vl~~~~~~~i 497 (668)
.+..|+ .++.....+. ++..++.+++|||..+|+.+-+.||+-.. +. .+.+.. ...+|+++. ++..+
T Consensus 269 -~~~KP~--Peifl~A~~~-lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV~-~~~~~~~l~~Ad~iI~--s~~EL 337 (381)
T PLN02575 269 -YRGKPD--PEMFIYAAQL-LNFIPERCIVFGNSNQTVEAAHDARMKCVAVA-SKHPIYELGAADLVVR--RLDEL 337 (381)
T ss_pred -CCCCCC--HHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHcCCEEEEEC-CCCChhHhcCCCEEEC--CHHHH
Confidence 011222 2233322222 47788999999999999999999996433 22 222222 234777765 55555
No 120
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.00 E-value=0.0016 Score=67.83 Aligned_cols=107 Identities=17% Similarity=0.086 Sum_probs=74.2
Q ss_pred ecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCcc-CCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 341 IEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVK-PGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 341 ~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~-~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
..+++.+++.+.++.|++.|++++++||++...+..+.+.+|+.. .-+.+ .|.+... ..+...
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~i---~~~~~~~-----------~~~~~~-- 247 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDDL---IGRPPDM-----------HFQREQ-- 247 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhhh---hCCcchh-----------hhcccC--
Confidence 567899999999999999999999999999999999999998842 11110 0110000 000000
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCC-CCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISA-GREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~-~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
--.+..|+-+...++.+ .. ..+.++|+||..+|+.+-+.||+.+
T Consensus 248 ---~~~kp~p~~~~~~l~~~-----~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 248 ---GDKRPDDVVKEEIFWEK-----IAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ---CCCCCcHHHHHHHHHHH-----hccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 00134556666666553 33 4589999999999999999999764
No 121
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=96.96 E-value=0.0029 Score=62.49 Aligned_cols=96 Identities=14% Similarity=0.179 Sum_probs=67.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|++++++|+-+...+....+.+|+...-+.++ .+.+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l~~~f~~i~--~~~~-------------------------- 145 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGVRDFFDAVI--TSEE-------------------------- 145 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCChHHhccEEE--Eecc--------------------------
Confidence 478999999999999999999999999888888888998842211111 1100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
..+..|. .++.+...++ ++...+.+++|||.. +|+.+-+.||+-
T Consensus 146 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~igDs~~~di~~A~~aG~~ 190 (221)
T TIGR02253 146 EGVEKPH--PKIFYAALKR-LGVKPEEAVMVGDRLDKDIKGAKNLGMK 190 (221)
T ss_pred CCCCCCC--HHHHHHHHHH-cCCChhhEEEECCChHHHHHHHHHCCCE
Confidence 0112232 2223333222 477788999999998 999999999964
No 122
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=96.93 E-value=0.0043 Score=58.59 Aligned_cols=116 Identities=15% Similarity=0.088 Sum_probs=73.2
Q ss_pred EEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 334 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 334 ~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
......+-+-++.|++.+.++.|+++|+++.++|+. ....+..+...+|+....... .+ ..
T Consensus 35 ~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~~~~~~~------~~------------~~ 96 (174)
T TIGR01685 35 IIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEITYAGKTV------PM------------HS 96 (174)
T ss_pred eEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcCCCCCcc------cH------------HH
Confidence 344444445568899999999999999999999987 888899998999974211100 00 00
Q ss_pred HHhhhcCCcEEEEecCHhhH--HHHHHHHHHhhc--CCCCCEEEEEcCCccCHHHHhhCCccEee
Q psy11770 413 LLDKVWPRLRVLARSSPSDK--YTLVKGMIDSKI--SAGREVVAVTGDGTNDGPALKKADVGFAM 473 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K--~~iv~~l~~~~~--~~~~~~v~~iGDg~ND~~mlk~A~vGIam 473 (668)
.++ ..+.++-.+..| ..+.+.+... + +...+.+++|||...|+.+-++|++-++.
T Consensus 97 ~Fd-----~iv~~~~~~~~kp~~~i~~~~~~~-~~~gl~p~e~l~VgDs~~di~aA~~aGi~~i~ 155 (174)
T TIGR01685 97 LFD-----DRIEIYKPNKAKQLEMILQKVNKV-DPSVLKPAQILFFDDRTDNVREVWGYGVTSCY 155 (174)
T ss_pred hce-----eeeeccCCchHHHHHHHHHHhhhc-ccCCCCHHHeEEEcChhHhHHHHHHhCCEEEE
Confidence 000 012222111112 2233333111 1 35678999999999999999999976653
No 123
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=96.90 E-value=0.0012 Score=62.23 Aligned_cols=98 Identities=15% Similarity=0.257 Sum_probs=70.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.+++.+.++.|++.|++++++|+..........+++|+...-+.++ .+.+..
T Consensus 76 ~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~~~f~~i~--~~~~~~----------------------- 130 (176)
T PF13419_consen 76 LQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLDDYFDEII--SSDDVG----------------------- 130 (176)
T ss_dssp EEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHGGGCSEEE--EGGGSS-----------------------
T ss_pred cchhhhhhhhhhhcccccceeEEeecCCccccccccccccccccccccc--ccchhh-----------------------
Confidence 3578999999999999999999999999999999999999852222111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
...| +..+.+.+.++ ++..++.+++|||+..|+.+-+.||+.-
T Consensus 131 ---~~Kp--~~~~~~~~~~~-~~~~p~~~~~vgD~~~d~~~A~~~G~~~ 173 (176)
T PF13419_consen 131 ---SRKP--DPDAYRRALEK-LGIPPEEILFVGDSPSDVEAAKEAGIKT 173 (176)
T ss_dssp ---SSTT--SHHHHHHHHHH-HTSSGGGEEEEESSHHHHHHHHHTTSEE
T ss_pred ---hhhh--HHHHHHHHHHH-cCCCcceEEEEeCCHHHHHHHHHcCCeE
Confidence 0122 22333333333 4778899999999999999999998653
No 124
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=96.87 E-value=0.0047 Score=58.83 Aligned_cols=95 Identities=13% Similarity=0.135 Sum_probs=63.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+++|++++++|+..... ..+..++|+...-+.++ .+.+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l~~~f~~i~--~~~~-------------------------- 135 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGLRDLFDVVI--FSGD-------------------------- 135 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCCHHHCCEEE--EcCC--------------------------
Confidence 578999999999999999999999988877 55555688742211111 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
.....|. ....+.+.++ ++...+.++++||...|+.+-+.+|+-
T Consensus 136 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~vgD~~~di~aA~~~G~~ 179 (183)
T TIGR01509 136 VGRGKPD--PDIYLLALKK-LGLKPEECLFVDDSPAGIEAAKAAGMH 179 (183)
T ss_pred CCCCCCC--HHHHHHHHHH-cCCCcceEEEEcCCHHHHHHHHHcCCE
Confidence 0011221 2222333222 467788999999999999999999873
No 125
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=96.87 E-value=0.0033 Score=60.16 Aligned_cols=95 Identities=16% Similarity=0.199 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++.|+++.++|+. ..+..+.+.+|+..--+.+ +.+.+
T Consensus 88 ~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l~~~f~~v--~~~~~-------------------------- 137 (185)
T TIGR02009 88 EVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGLTDYFDAI--VDADE-------------------------- 137 (185)
T ss_pred CCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcChHHHCCEe--eehhh--------------------------
Confidence 58999999999999999999999987 5677788888884211111 11100
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
..+..|. ..+.+...++ ++...+.+++|||+.+|+.+-+.||+..
T Consensus 138 ~~~~kp~--~~~~~~~~~~-~~~~~~~~v~IgD~~~di~aA~~~G~~~ 182 (185)
T TIGR02009 138 VKEGKPH--PETFLLAAEL-LGVSPNECVVFEDALAGVQAARAAGMFA 182 (185)
T ss_pred CCCCCCC--hHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCeE
Confidence 0011222 2233333322 4667788999999999999999998753
No 126
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=96.87 E-value=0.0022 Score=61.34 Aligned_cols=95 Identities=15% Similarity=0.221 Sum_probs=63.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++|+.|+++|+++.++|+... +....+.+|+...-+. ++.+.+.
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l~~~f~~--~~~~~~~------------------------- 137 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGLIDYFDA--IVDPAEI------------------------- 137 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCcHhhCcE--EEehhhc-------------------------
Confidence 5789999999999999999999997543 4567778887422111 1111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..| +.++.+...++ ++...+.+++|||+.+|+.+-+.||+-.
T Consensus 138 -~~~kp--~p~~~~~~~~~-~~~~~~~~v~vgD~~~di~aA~~aG~~~ 181 (185)
T TIGR01990 138 -KKGKP--DPEIFLAAAEG-LGVSPSECIGIEDAQAGIEAIKAAGMFA 181 (185)
T ss_pred -CCCCC--ChHHHHHHHHH-cCCCHHHeEEEecCHHHHHHHHHcCCEE
Confidence 11122 23333333222 4667788999999999999999999753
No 127
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.84 E-value=0.0048 Score=56.82 Aligned_cols=101 Identities=17% Similarity=0.174 Sum_probs=64.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCH---------------HHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNI---------------NTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~---------------~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.++++.|+++|+++.++|+.+. ..+..+.+.+|+... ..+....+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-~~~~~~~~~~----------- 94 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELLRQLGVAVD-GVLFCPHHPA----------- 94 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHHHhCCCcee-EEEECCCCCC-----------
Confidence 4689999999999999999999998762 345566777777310 0000000000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
. ..- ....+.++++.+.++ ++...+.+++|||...|+.+-+.+++-..
T Consensus 95 -----------~-~~~---~~KP~~~~~~~~~~~-~~~~~~e~i~IGDs~~Di~~A~~~Gi~~v 142 (147)
T TIGR01656 95 -----------D-NCS---CRKPKPGLILEALKR-LGVDASRSLVVGDRLRDLQAARNAGLAAV 142 (147)
T ss_pred -----------C-CCC---CCCCCHHHHHHHHHH-cCCChHHEEEEcCCHHHHHHHHHCCCCEE
Confidence 0 000 012234445544443 47788899999999999999999987543
No 128
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=96.82 E-value=0.0032 Score=62.24 Aligned_cols=95 Identities=17% Similarity=0.223 Sum_probs=66.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++. ++++++|+-....+..+.+++|+...-+.++. +.+
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~~~fd~i~~--~~~-------------------------- 147 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLFPFFDDIFV--SED-------------------------- 147 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcHhhcCEEEE--cCc--------------------------
Confidence 4689999999999999 99999999999999999999998432111110 000
Q ss_pred EEecCHhhHHHHHHHHHHhhc-CCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKI-SAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~-~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
.....| +..+.+...++ + +...+.+++|||+. +|+.+-+.+|+-
T Consensus 148 ~~~~KP--~~~~~~~~~~~-~~~~~~~~~v~igD~~~~di~~A~~~G~~ 193 (224)
T TIGR02254 148 AGIQKP--DKEIFNYALER-MPKFSKEEVLMIGDSLTADIKGGQNAGLD 193 (224)
T ss_pred cCCCCC--CHHHHHHHHHH-hcCCCchheEEECCCcHHHHHHHHHCCCc
Confidence 001122 22333333332 4 56778899999998 899999999963
No 129
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.80 E-value=0.0052 Score=58.09 Aligned_cols=87 Identities=18% Similarity=0.205 Sum_probs=63.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC-HHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN-INTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~-~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+.+++.++++.|++.|++++++|+.+ ...+..+.+.+|+..
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl~~------------------------------------- 85 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGIPV------------------------------------- 85 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCCEE-------------------------------------
Confidence 578999999999999999999999988 566777777777621
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
......|. ..+.....++ ++..++.+++|||.. .|+.+-+.||+-
T Consensus 86 ~~~~~KP~--p~~~~~~l~~-~~~~~~~~l~IGDs~~~Di~aA~~aGi~ 131 (170)
T TIGR01668 86 LPHAVKPP--GCAFRRAHPE-MGLTSEQVAVVGDRLFTDVMGGNRNGSY 131 (170)
T ss_pred EcCCCCCC--hHHHHHHHHH-cCCCHHHEEEECCcchHHHHHHHHcCCe
Confidence 00011222 2233333332 467788899999998 799999999963
No 130
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=96.76 E-value=0.0049 Score=61.27 Aligned_cols=40 Identities=25% Similarity=0.280 Sum_probs=35.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCC----CHHHHHHHHHHcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGD----NINTARSIATKCGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd----~~~ta~~ia~~~gi~ 384 (668)
+.+++.+.++.++++|+++.++|++ ...++..+.+.+|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999999 677899999999994
No 131
>PLN02940 riboflavin kinase
Probab=96.75 E-value=0.0035 Score=67.40 Aligned_cols=98 Identities=15% Similarity=0.150 Sum_probs=66.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH-HcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT-KCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~-~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|++.|+++.++|+.....+....+ ..|+...-+. ++.+++.
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl~~~Fd~--ii~~d~v------------------------ 146 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGWKESFSV--IVGGDEV------------------------ 146 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccChHhhCCE--EEehhhc------------------------
Confidence 467999999999999999999999999888777665 5677322111 1111110
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+..|. .++.....++ ++..++.+++|||+.+|+.+-+.||+...
T Consensus 147 --~~~KP~--p~~~~~a~~~-lgv~p~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 147 --EKGKPS--PDIFLEAAKR-LNVEPSNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred --CCCCCC--HHHHHHHHHH-cCCChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 111221 2222222222 46778899999999999999999997643
No 132
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=96.69 E-value=0.0038 Score=57.52 Aligned_cols=108 Identities=15% Similarity=0.076 Sum_probs=71.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCce-EEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDY-LILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~-i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++|+.++.++.+++.+++++++|+....-...+-+.++=-..-.++ ++.+...+.. + .....
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~ivgke~i~~idi~sn~~~ih~-----------d-----g~h~i 136 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIVGKERIYCIDIVSNNDYIHI-----------D-----GQHSI 136 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhccccceeeeEEeecCceEcC-----------C-----Cceee
Confidence 47999999999999999999999999988888888776621000010 1111100000 0 00001
Q ss_pred EEEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
++.. .-..+|...|+.+ ..+.+.+.++|||+.|+.+-+.+|+=.|
T Consensus 137 ~~~~ds~fG~dK~~vI~~l-----~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 137 KYTDDSQFGHDKSSVIHEL-----SEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ecCCccccCCCcchhHHHh-----hcCCceEEEecCCcccccHhhhhhhHhh
Confidence 1111 1125789999986 5567789999999999999999998875
No 133
>PRK09449 dUMP phosphatase; Provisional
Probab=96.69 E-value=0.0065 Score=60.16 Aligned_cols=122 Identities=11% Similarity=0.140 Sum_probs=76.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|+ +|+++.++|+.....+....+++|+...-+. .+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--------------------------------v~ 141 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGLRDYFDL--------------------------------LV 141 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCChHHHcCE--------------------------------EE
Confidence 46899999999999 6899999999988888888888888421111 11
Q ss_pred EEecC--HhhHHHHHHHHHHhhcCCC-CCEEEEEcCCc-cCHHHHhhCCccE-eeCCCccHH-HHHhcchhcccCCchHH
Q psy11770 424 LARSS--PSDKYTLVKGMIDSKISAG-REVVAVTGDGT-NDGPALKKADVGF-AMGITGTDV-AKEASDIILTDDNFSSI 497 (668)
Q Consensus 424 ~~r~~--p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~-ND~~mlk~A~vGI-am~~~~~~~-ak~~ad~vl~~~~~~~i 497 (668)
.+... +..+..+.....++ ++.. .+.+++|||+. +|+.+-+.||+-. .+...+... ....+|+++. ++..+
T Consensus 142 ~~~~~~~~KP~p~~~~~~~~~-~~~~~~~~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~~~~~~~~~~~i~--~~~el 218 (224)
T PRK09449 142 ISEQVGVAKPDVAIFDYALEQ-MGNPDRSRVLMVGDNLHSDILGGINAGIDTCWLNAHGREQPEGIAPTYQVS--SLSEL 218 (224)
T ss_pred EECccCCCCCCHHHHHHHHHH-cCCCCcccEEEEcCCcHHHHHHHHHCCCcEEEECCCCCCCCCCCCCeEEEC--CHHHH
Confidence 22110 11122344443333 4543 46899999998 7999999999753 333112111 1124667665 56666
Q ss_pred HHHH
Q psy11770 498 VKAV 501 (668)
Q Consensus 498 ~~~l 501 (668)
.+++
T Consensus 219 ~~~l 222 (224)
T PRK09449 219 EQLL 222 (224)
T ss_pred HHHH
Confidence 6544
No 134
>PLN02811 hydrolase
Probab=96.60 E-value=0.0089 Score=59.10 Aligned_cols=100 Identities=14% Similarity=0.174 Sum_probs=58.8
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH-HHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARS-IATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~-ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.|+.|++.|+++.++||-....... ..+..++...-..+ +.+.+.
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~~~~~~~~~l~~~f~~i--~~~~~~------------------------ 131 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFDLKTQRHGELFSLMHHV--VTGDDP------------------------ 131 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHHHHHcccHHHHhhCCEE--EECChh------------------------
Confidence 468999999999999999999999987654432 22222332111111 111100
Q ss_pred EEEecCHhhHHHHHHHHHHhhcC---CCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKIS---AGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~---~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-+.+..|+ ..+.....++ ++ ...+.+++|||+..|+.+-+.||+...
T Consensus 132 ~~~~~KP~--p~~~~~a~~~-~~~~~~~~~~~v~IgDs~~di~aA~~aG~~~i 181 (220)
T PLN02811 132 EVKQGKPA--PDIFLAAARR-FEDGPVDPGKVLVFEDAPSGVEAAKNAGMSVV 181 (220)
T ss_pred hccCCCCC--cHHHHHHHHH-hCCCCCCccceEEEeccHhhHHHHHHCCCeEE
Confidence 00011222 1222222222 23 567889999999999999999996443
No 135
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.54 E-value=0.019 Score=52.50 Aligned_cols=115 Identities=16% Similarity=0.230 Sum_probs=81.1
Q ss_pred HHHHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEE
Q psy11770 285 NVIEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIR 364 (668)
Q Consensus 285 ~~~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~ 364 (668)
-..+.+.++|.|.+.+-.. -|+++-- ..+..|++++-+..++++|+++.
T Consensus 18 i~~~~L~~~Gikgvi~DlD-----------------------------NTLv~wd--~~~~tpe~~~W~~e~k~~gi~v~ 66 (175)
T COG2179 18 ITPDILKAHGIKGVILDLD-----------------------------NTLVPWD--NPDATPELRAWLAELKEAGIKVV 66 (175)
T ss_pred CCHHHHHHcCCcEEEEecc-----------------------------Cceeccc--CCCCCHHHHHHHHHHHhcCCEEE
Confidence 3456788899999877421 1333321 23578999999999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhc
Q psy11770 365 MVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKI 444 (668)
Q Consensus 365 ~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~ 444 (668)
++|..+...+...++.+|+. -++--..|..+ .+-+++.+ .
T Consensus 67 vvSNn~e~RV~~~~~~l~v~-------------------------------------fi~~A~KP~~~-~fr~Al~~--m 106 (175)
T COG2179 67 VVSNNKESRVARAAEKLGVP-------------------------------------FIYRAKKPFGR-AFRRALKE--M 106 (175)
T ss_pred EEeCCCHHHHHhhhhhcCCc-------------------------------------eeecccCccHH-HHHHHHHH--c
Confidence 99999999999999999993 12222234332 23344433 4
Q ss_pred CCCCCEEEEEcCC-ccCHHHHhhCCcc
Q psy11770 445 SAGREVVAVTGDG-TNDGPALKKADVG 470 (668)
Q Consensus 445 ~~~~~~v~~iGDg-~ND~~mlk~A~vG 470 (668)
+.+.+.|+|+||. ..|+-+=+.+|+-
T Consensus 107 ~l~~~~vvmVGDqL~TDVlggnr~G~~ 133 (175)
T COG2179 107 NLPPEEVVMVGDQLFTDVLGGNRAGMR 133 (175)
T ss_pred CCChhHEEEEcchhhhhhhcccccCcE
Confidence 7889999999998 5688776666643
No 136
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=96.54 E-value=0.0079 Score=55.66 Aligned_cols=90 Identities=16% Similarity=0.257 Sum_probs=60.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
..+++.+.++.|++.|+++.++|+.....+....+.. +... -..+...+ .+
T Consensus 65 ~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~-l~~~-f~~i~~~~--------------------------~~- 115 (154)
T TIGR01549 65 YIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH-LGDY-FDLILGSD--------------------------EF- 115 (154)
T ss_pred eccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH-HHhc-CcEEEecC--------------------------CC-
Confidence 3478999999999999999999999999888887775 4211 11111100 00
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCC
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKAD 468 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~ 468 (668)
. ..| +......+.++ ++..+ .+++|||+.+|+.+-+.||
T Consensus 116 ~-~Kp--~~~~~~~~~~~-~~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 116 G-AKP--EPEIFLAALES-LGLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred C-CCc--CHHHHHHHHHH-cCCCC-CEEEEeCCHHHHHHHHHcc
Confidence 0 122 23444444333 46666 8999999999999988775
No 137
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.54 E-value=0.013 Score=55.75 Aligned_cols=38 Identities=8% Similarity=0.190 Sum_probs=34.3
Q ss_pred CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 347 PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 347 ~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
+.+...+.+|+++|++|+.+|.........+-+++|+-
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 45778999999999999999999999999999999984
No 138
>PLN03017 trehalose-phosphatase
Probab=96.52 E-value=0.015 Score=61.16 Aligned_cols=67 Identities=18% Similarity=0.213 Sum_probs=47.4
Q ss_pred hhHHHHHHHHHHhhcCCC---CCEEEEEcCCccCHHHHhhC-----CccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAG---REVVAVTGDGTNDGPALKKA-----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~---~~~v~~iGDg~ND~~mlk~A-----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. +... ...++++||...|-.|++.. ++||.+| .... ...|+|.+. +-+.+.++|
T Consensus 282 ~dKG~Av~~LL~~-l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~VG-~~~k--~T~A~y~L~--dp~eV~~fL 355 (366)
T PLN03017 282 WDKGKALEFLLES-LGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILVS-KFPK--DTDASYSLQ--DPSEVMDFL 355 (366)
T ss_pred CCHHHHHHHHHHh-cccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEEC-CCCC--CCcceEeCC--CHHHHHHHH
Confidence 4899999998764 2322 34689999999999999865 4677777 3221 256788886 667777666
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 356 ~ 356 (366)
T PLN03017 356 A 356 (366)
T ss_pred H
Confidence 3
No 139
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.52 E-value=0.011 Score=56.14 Aligned_cols=121 Identities=17% Similarity=0.112 Sum_probs=66.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH---------------HHHHHHHHcCCccCCCceEEe-ehhhHHHhhhcCchh
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN---------------TARSIATKCGIVKPGEDYLIL-EGKEFNRRVRDNNGE 408 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~---------------ta~~ia~~~gi~~~~~~~i~~-~g~~~~~~~~~~~~~ 408 (668)
+.|++.++|+.|+++|+++.++|.-+.. ....+..+.|+.- ..++.. .+..-.
T Consensus 27 ~~pgv~e~L~~Lk~~G~~l~i~TN~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~i~~~~~~~~~~--------- 95 (176)
T TIGR00213 27 FIDGVIDALRELKKMGYALVLVTNQSGIARGYFTEAQFEQLTEWMDWSLAERDVDL--DGIYYCPHHPEGV--------- 95 (176)
T ss_pred ECCCHHHHHHHHHHCCCEEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHcCCCc--cEEEECCCCCccc---------
Confidence 5799999999999999999999987641 1112233333310 000000 000000
Q ss_pred hhHHHHhhhcCCc-EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE--eeCCCccH--H-HH
Q psy11770 409 VQQNLLDKVWPRL-RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF--AMGITGTD--V-AK 482 (668)
Q Consensus 409 ~~~~~l~~~~~~~-~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI--am~~~~~~--~-ak 482 (668)
..+ .-.....| +..++....++ ++...+.++||||..+|+.+-+.|++.. .+. .+.. . ..
T Consensus 96 ----------~~~~~~~~~~KP--~p~~~~~a~~~-~~~~~~~~v~VGDs~~Di~aA~~aG~~~~i~v~-~g~~~~~~~~ 161 (176)
T TIGR00213 96 ----------EEFRQVCDCRKP--KPGMLLQARKE-LHIDMAQSYMVGDKLEDMQAGVAAKVKTNVLVR-TGKPITPEAE 161 (176)
T ss_pred ----------ccccCCCCCCCC--CHHHHHHHHHH-cCcChhhEEEEcCCHHHHHHHHHCCCcEEEEEe-cCCccccccc
Confidence 000 00001122 23333333332 4778889999999999999999999853 332 2321 1 12
Q ss_pred Hhcchhcc
Q psy11770 483 EASDIILT 490 (668)
Q Consensus 483 ~~ad~vl~ 490 (668)
..+|+++.
T Consensus 162 ~~ad~~i~ 169 (176)
T TIGR00213 162 NIADWVLN 169 (176)
T ss_pred ccCCEEec
Confidence 34777775
No 140
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=96.50 E-value=0.0061 Score=56.97 Aligned_cols=98 Identities=21% Similarity=0.182 Sum_probs=64.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCC---------------HHHHHHHHHHcCCccCCCceEEee---hhhHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDN---------------INTARSIATKCGIVKPGEDYLILE---GKEFNRRVRDN 405 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~---------------~~ta~~ia~~~gi~~~~~~~i~~~---g~~~~~~~~~~ 405 (668)
++-|++.++|+.|+++|+++.++|... ...+..+.+.+|+. -+.++... +.+
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~~l~~~gl~--fd~ii~~~~~~~~~-------- 98 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQIFRSQGII--FDDVLICPHFPDDN-------- 98 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCCccccCCcCCHHHHHHHHHHHHHHHHHCCCc--eeEEEECCCCCCCC--------
Confidence 467999999999999999999999852 34556667777772 01111000 000
Q ss_pred chhhhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 406 NGEVQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 406 ~~~~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.. ... -|..++..+.++ ++...+.+++|||+.+|+.+-+.+++...
T Consensus 99 -----------------~~-~~K--P~~~~~~~~~~~-~~~~~~e~l~IGD~~~Di~~A~~aGi~~i 144 (161)
T TIGR01261 99 -----------------CD-CRK--PKIKLLEPYLKK-NLIDKARSYVIGDRETDMQLAENLGIRGI 144 (161)
T ss_pred -----------------CC-CCC--CCHHHHHHHHHH-cCCCHHHeEEEeCCHHHHHHHHHCCCeEE
Confidence 00 012 223444444333 46677889999999999999999997654
No 141
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.41 E-value=0.003 Score=58.28 Aligned_cols=95 Identities=16% Similarity=0.026 Sum_probs=66.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++|++.+.++.|+ .++++.++|+-....+..+.+.+++...-... ++.+++..
T Consensus 45 ~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~~~~~f~~-i~~~~d~~------------------------ 98 (148)
T smart00577 45 KKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDPKKYFGYR-RLFRDECV------------------------ 98 (148)
T ss_pred EECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCcCCCEeee-EEECcccc------------------------
Confidence 57999999999998 57999999999999999999998873210011 11111110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+..|. +.+.+.. ++...+.+++|||..+|..+-+.+++-|.
T Consensus 99 --~~KP~----~~k~l~~--l~~~p~~~i~i~Ds~~~~~aa~~ngI~i~ 139 (148)
T smart00577 99 --FVKGK----YVKDLSL--LGRDLSNVIIIDDSPDSWPFHPENLIPIK 139 (148)
T ss_pred --ccCCe----EeecHHH--cCCChhcEEEEECCHHHhhcCccCEEEec
Confidence 11221 3333322 46788999999999999999888877664
No 142
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.41 E-value=0.0086 Score=59.18 Aligned_cols=117 Identities=20% Similarity=0.317 Sum_probs=74.0
Q ss_pred CCCCchHHHHHHH--HHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKC--QRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l--~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
|+.|+.++.++.+ ++.|+.+.++|.-+......+-+.-|+...-.. +.-+...++. ++...-. ....
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~~f~~-I~TNpa~~~~-----~G~l~v~-----pyh~ 139 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRDCFSE-IFTNPACFDA-----DGRLRVR-----PYHS 139 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCccccce-EEeCCceecC-----CceEEEe-----CccC
Confidence 5789999999999 568999999999999999999999998532222 1111111111 0000000 0000
Q ss_pred EEEEecCHh-hHHHHHHHHHHhhcC--CCCCEEEEEcCCccC-HHHHh--hCCccE
Q psy11770 422 RVLARSSPS-DKYTLVKGMIDSKIS--AGREVVAVTGDGTND-GPALK--KADVGF 471 (668)
Q Consensus 422 ~v~~r~~p~-~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND-~~mlk--~A~vGI 471 (668)
.-|.+|.|. =|..+++.++....+ ...+.|++||||.|| +|+++ .+|+-.
T Consensus 140 h~C~~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~~D~v~ 195 (234)
T PF06888_consen 140 HGCSLCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRPRDVVF 195 (234)
T ss_pred CCCCcCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCCCCEEe
Confidence 123455553 699999988765322 235899999999999 56654 455444
No 143
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=96.31 E-value=0.0099 Score=53.27 Aligned_cols=95 Identities=8% Similarity=0.092 Sum_probs=61.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC-CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD-NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd-~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.+++.+.++.|+++|+++.++|+. ....+..+.+..+. .+.+..+ ...++. .
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~~---~~~i~~l-----------------~~~f~~-----~ 83 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFED---FGIIFPL-----------------AEYFDP-----L 83 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhccc---cccchhh-----------------Hhhhhh-----h
Confidence 68999999999999999999999999 77777777776661 0000000 000111 1
Q ss_pred EEEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCccCHHHHhh
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGTNDGPALKK 466 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~ND~~mlk~ 466 (668)
+.++..| |.+.+....++ ++ ..++.++++||...|...++.
T Consensus 84 ~~~~~~p--kp~~~~~a~~~-lg~~~~p~~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 84 TIGYWLP--KSPRLVEIALK-LNGVLKPKSILFVDDRPDNNEEVDY 126 (128)
T ss_pred hhcCCCc--HHHHHHHHHHH-hcCCCCcceEEEECCCHhHHHHHHh
Confidence 1121223 34444444333 46 788999999999999877654
No 144
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.28 E-value=0.015 Score=56.58 Aligned_cols=95 Identities=15% Similarity=0.225 Sum_probs=62.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|+++|+++.++|+-... +....+.+|+...-+.++. +.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l~~~fd~i~~--s~~-------------------------- 155 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGLLEYFDFVVT--SYE-------------------------- 155 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCcHHhcceEEe--ecc--------------------------
Confidence 57899999999999999999999986654 4667777887321111110 000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCc-cCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGT-NDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~-ND~~mlk~A~vG 470 (668)
+....|+ ..+.+...++ ++..++.+++|||+. +|+.+-+.||+-
T Consensus 156 ~~~~KP~--~~~~~~~~~~-~~~~~~~~~~IgD~~~~Di~~A~~aG~~ 200 (203)
T TIGR02252 156 VGAEKPD--PKIFQEALER-AGISPEEALHIGDSLRNDYQGARAAGWR 200 (203)
T ss_pred cCCCCCC--HHHHHHHHHH-cCCChhHEEEECCCchHHHHHHHHcCCe
Confidence 0001222 2333333332 477888999999997 899999998864
No 145
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.15 E-value=0.015 Score=60.98 Aligned_cols=95 Identities=11% Similarity=0.134 Sum_probs=73.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH----cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK----CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~----~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
++.+++.++|+.|+++|+++.++|..+...+..+.++ +++...
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~~~~~~~~~~~--------------------------------- 77 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFERRKDFILQAED--------------------------------- 77 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHhCccccCcHHH---------------------------------
Confidence 3578999999999999999999999999999998887 666210
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
.......+..|...++.+.++ ++...+.+++|||...|+.+.+.+...+.+-
T Consensus 78 --f~~~~~~~~pk~~~i~~~~~~-l~i~~~~~vfidD~~~d~~~~~~~lp~~~~~ 129 (320)
T TIGR01686 78 --FDARSINWGPKSESLRKIAKK-LNLGTDSFLFIDDNPAERANVKITLPVKTLL 129 (320)
T ss_pred --eeEEEEecCchHHHHHHHHHH-hCCCcCcEEEECCCHHHHHHHHHHCCCCccC
Confidence 011122244566666666554 5788899999999999999999998876543
No 146
>KOG3120|consensus
Probab=96.09 E-value=0.025 Score=54.00 Aligned_cols=125 Identities=22% Similarity=0.289 Sum_probs=76.5
Q ss_pred CCCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH-HHh-hhcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN-LLD-KVWPR 420 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~-~l~-~~~~~ 420 (668)
|+.|+..++|+.+++.|- .++++|.-|......+.+..|+.. +...+.......+.. .+. .-+..
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~~d------------~F~~IfTNPa~~da~G~L~v~pyH~ 151 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGIHD------------LFSEIFTNPACVDASGRLLVRPYHT 151 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccHHH------------HHHHHhcCCcccCCCCcEEeecCCC
Confidence 678999999999999996 999999999998888888888831 000000000000000 000 00000
Q ss_pred cEEEEecCHh-hHHHHHHHHHHhhcCCC--CCEEEEEcCCccC-HHHHhhCCccEeeCCCccHH
Q psy11770 421 LRVLARSSPS-DKYTLVKGMIDSKISAG--REVVAVTGDGTND-GPALKKADVGFAMGITGTDV 480 (668)
Q Consensus 421 ~~v~~r~~p~-~K~~iv~~l~~~~~~~~--~~~v~~iGDg~ND-~~mlk~A~vGIam~~~~~~~ 480 (668)
-.-|.+|.+. =|..++..++.+.++.. .+.+..+|||.|| +|+++...--+||-..|-+.
T Consensus 152 ~hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~~D~ampRkgfpl 215 (256)
T KOG3120|consen 152 QHSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRACDVAMPRKGFPL 215 (256)
T ss_pred CCccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcccCceecccCCCch
Confidence 0123343333 37777777766544333 3489999999999 78888777777776444443
No 147
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=96.07 E-value=0.013 Score=57.93 Aligned_cols=96 Identities=11% Similarity=0.153 Sum_probs=64.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.| ++++.++|+.....+...-+..|+...-.. .++.+.+..
T Consensus 88 ~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~~~F~~-~v~~~~~~~------------------------ 139 (221)
T PRK10563 88 EPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGMLHYFPD-KLFSGYDIQ------------------------ 139 (221)
T ss_pred CcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChHHhCcc-eEeeHHhcC------------------------
Confidence 4568999999998 499999999998888888888888422111 111211110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+..| +.++.....++ ++..++.+++|||+.+|+.+-+.||+.+.
T Consensus 140 --~~KP--~p~~~~~a~~~-~~~~p~~~l~igDs~~di~aA~~aG~~~i 183 (221)
T PRK10563 140 --RWKP--DPALMFHAAEA-MNVNVENCILVDDSSAGAQSGIAAGMEVF 183 (221)
T ss_pred --CCCC--ChHHHHHHHHH-cCCCHHHeEEEeCcHhhHHHHHHCCCEEE
Confidence 1122 22333333222 46777889999999999999999998775
No 148
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.04 E-value=0.023 Score=59.89 Aligned_cols=101 Identities=22% Similarity=0.179 Sum_probs=63.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCC---------------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchh
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGD---------------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGE 408 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd---------------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~ 408 (668)
++.|++.+.++.|+++|+++.++|+- ....+..+.+..|+.. +. +.+......
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~iL~~~gl~f--d~-i~i~~~~~s--------- 97 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQIFESQGIKF--DE-VLICPHFPE--------- 97 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECCccccCccccHHHHhhHHHHHHHHHHHcCCce--ee-EEEeCCcCc---------
Confidence 57899999999999999999999984 2334555666666621 11 111100000
Q ss_pred hhHHHHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 409 VQQNLLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 409 ~~~~~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
+ ...+| . .|..++..+.++ +......++||||+.+|..+-+.|++-..
T Consensus 98 ----------d--~~~~r-K--P~p~~l~~a~~~-l~v~~~~svmIGDs~sDi~aAk~aGi~~I 145 (354)
T PRK05446 98 ----------D--NCSCR-K--PKTGLVEEYLAE-GAIDLANSYVIGDRETDVQLAENMGIKGI 145 (354)
T ss_pred ----------c--cCCCC-C--CCHHHHHHHHHH-cCCCcccEEEEcCCHHHHHHHHHCCCeEE
Confidence 0 00011 2 233344443332 46677899999999999999999997654
No 149
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=96.04 E-value=0.024 Score=53.31 Aligned_cols=94 Identities=17% Similarity=0.185 Sum_probs=60.8
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH------------HHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN------------TARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~------------ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
+-|++.++++.|+++|+++.++|..+.. .+..+.+.+|+.. ..++..+..
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~~~~~~~~~~~~~~~i~~~l~~~gl~~---~~ii~~~~~--------------- 104 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSGIGRGKLSAESFKNKIEAFLEKLKVPI---QVLAATHAG--------------- 104 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcccccCcccHHHHHHHHHHHHHHcCCCE---EEEEecCCC---------------
Confidence 3599999999999999999999975542 3566778888731 111111100
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcC--CCCCEEEEEcCCc--------cCHHHHhhCCccE
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKIS--AGREVVAVTGDGT--------NDGPALKKADVGF 471 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~--~~~~~v~~iGDg~--------ND~~mlk~A~vGI 471 (668)
..+ .|. ..+++.+.++ ++ ...+.++||||.. +|+.+-+.||+-.
T Consensus 105 -----------~~~-KP~--p~~~~~~~~~-~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~ 158 (166)
T TIGR01664 105 -----------LYR-KPM--TGMWEYLQSQ-YNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEF 158 (166)
T ss_pred -----------CCC-CCc--cHHHHHHHHH-cCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCc
Confidence 000 221 2233333332 34 5678899999986 6999999998765
No 150
>PRK10444 UMP phosphatase; Provisional
Probab=95.99 E-value=0.073 Score=53.59 Aligned_cols=48 Identities=17% Similarity=0.302 Sum_probs=40.5
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc---CCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC---GIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~---gi~ 384 (668)
|.+.-.+++-|++.++++.|+++|++++++||+...+...+++++ |+.
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~ 60 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVD 60 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 445556788999999999999999999999999998888877764 663
No 151
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=95.98 E-value=0.16 Score=51.49 Aligned_cols=40 Identities=23% Similarity=0.329 Sum_probs=34.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIV 384 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 384 (668)
+-|++.++|+.|+++|++++++||++..+ .....+++|+.
T Consensus 22 ~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~ 64 (257)
T TIGR01458 22 AVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFD 64 (257)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCC
Confidence 88999999999999999999999987775 55556667874
No 152
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=95.92 E-value=0.087 Score=53.12 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=39.2
Q ss_pred ecCCCCCchHHHHHHHHHcCCEEEEEcC---CCHHHHHHHHHHcCCccC
Q psy11770 341 IEDPVRPEVPEAIKKCQRAGITIRMVTG---DNINTARSIATKCGIVKP 386 (668)
Q Consensus 341 ~~d~l~~~~~~~I~~l~~aGI~v~~~TG---d~~~ta~~ia~~~gi~~~ 386 (668)
-.+++-+++.++|++|++.|++++++|| +.........+++|+...
T Consensus 14 ~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 14 KGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred cCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 3456667999999999999999999996 888888888899998544
No 153
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.90 E-value=0.038 Score=55.84 Aligned_cols=86 Identities=15% Similarity=0.144 Sum_probs=57.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
.++-|++.+.++.+++.|+++.++|++.... +....++.|+.....+.
T Consensus 117 a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~~~~d~----------------------------- 167 (266)
T TIGR01533 117 AKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQADEEH----------------------------- 167 (266)
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCCCCcce-----------------------------
Confidence 4578999999999999999999999988443 44566778884322222
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHh
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALK 465 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk 465 (668)
++.|-....|..-.+.+. ....+++++||..+|.....
T Consensus 168 ---lllr~~~~~K~~rr~~I~-----~~y~Ivl~vGD~~~Df~~~~ 205 (266)
T TIGR01533 168 ---LLLKKDKSSKESRRQKVQ-----KDYEIVLLFGDNLLDFDDFF 205 (266)
T ss_pred ---EEeCCCCCCcHHHHHHHH-----hcCCEEEEECCCHHHhhhhh
Confidence 233322233444444432 23467999999999986543
No 154
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=95.81 E-value=0.053 Score=53.44 Aligned_cols=97 Identities=11% Similarity=0.182 Sum_probs=64.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC---CccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG---IVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g---i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
-++.|++.++++.|+++|+++.++|..+......+.+..+ +..- ++....
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~~~~~L~~~---------------------------f~~~fd 146 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHSDAGNLTPY---------------------------FSGYFD 146 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhccccchhhh---------------------------cceEEE
Confidence 4689999999999999999999999998877776665542 2100 000000
Q ss_pred CcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 420 RLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 420 ~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
..+.....|+ ....+.++ ++..++.++++||...|+.+-+.||+-..
T Consensus 147 -~~~g~KP~p~----~y~~i~~~-lgv~p~e~lfVgDs~~Di~AA~~AG~~ti 193 (220)
T TIGR01691 147 -TTVGLKTEAQ----SYVKIAGQ-LGSPPREILFLSDIINELDAARKAGLHTG 193 (220)
T ss_pred -eCcccCCCHH----HHHHHHHH-hCcChhHEEEEeCCHHHHHHHHHcCCEEE
Confidence 0111112222 33333222 47778899999999999999999997654
No 155
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=95.70 E-value=0.043 Score=66.69 Aligned_cols=117 Identities=11% Similarity=0.157 Sum_probs=76.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+.|++.+.++.|+++|+++.++|+.....+....+++|+....-+.+ +.+.+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd~i-v~~~~-------------------------- 213 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFDAI-VSADA-------------------------- 213 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCCEE-EECcc--------------------------
Confidence 357999999999999999999999999999999889999841111111 11110
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc---cEeeCCCccHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV---GFAMGITGTDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v---GIam~~~~~~~ak~~ad~vl~ 490 (668)
+.+..|+ .++.....++ ++..++.+++|||..+|+.+-+.|++ ++.-+....+.....+|+++.
T Consensus 214 ~~~~KP~--Pe~~~~a~~~-lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v~~~~~~~~L~~~~a~~vi~ 280 (1057)
T PLN02919 214 FENLKPA--PDIFLAAAKI-LGVPTSECVVIEDALAGVQAARAAGMRCIAVTTTLSEEILKDAGPSLIRK 280 (1057)
T ss_pred cccCCCC--HHHHHHHHHH-cCcCcccEEEEcCCHHHHHHHHHcCCEEEEECCCCCHHHHhhCCCCEEEC
Confidence 1112232 2333333322 57788899999999999999999996 332221112223345677776
No 156
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.04 E-value=0.14 Score=51.34 Aligned_cols=48 Identities=19% Similarity=0.149 Sum_probs=37.6
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH--HHHHHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR--SIATKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~--~ia~~~gi~ 384 (668)
|.+.-..++-|++.++++.|+++|+++.++|+.....+. ...+++|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 333445678999999999999999999999986654444 566888884
No 157
>PHA02597 30.2 hypothetical protein; Provisional
Probab=95.01 E-value=0.073 Score=51.47 Aligned_cols=96 Identities=11% Similarity=0.041 Sum_probs=59.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++.|++.+ +.+++|..+........+.+|+..-...+ . ...+
T Consensus 74 ~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~~~~~~~~~~l~~~f~~~---------------------------f-~~i~ 124 (197)
T PHA02597 74 SAYDDALDVINKLKEDY-DFVAVTALGDSIDALLNRQFNLNALFPGA---------------------------F-SEVL 124 (197)
T ss_pred cCCCCHHHHHHHHHhcC-CEEEEeCCccchhHHHHhhCCHHHhCCCc---------------------------c-cEEE
Confidence 46899999999999985 56777775555444455566662110000 0 0012
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC--CccEe
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA--DVGFA 472 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A--~vGIa 472 (668)
.++.. ..|.+++....++ ++ .+.+++|||..+|+.+-++| |+-..
T Consensus 125 ~~~~~-~~kp~~~~~a~~~-~~--~~~~v~vgDs~~di~aA~~a~~Gi~~i 171 (197)
T PHA02597 125 MCGHD-ESKEKLFIKAKEK-YG--DRVVCFVDDLAHNLDAAHEALSQLPVI 171 (197)
T ss_pred EeccC-cccHHHHHHHHHH-hC--CCcEEEeCCCHHHHHHHHHHHcCCcEE
Confidence 22222 1245566655443 34 57799999999999999999 98544
No 158
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=95.00 E-value=0.045 Score=53.58 Aligned_cols=93 Identities=15% Similarity=0.131 Sum_probs=58.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH--HHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT--ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t--a~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
++.|++.+.++.|+++|+++.++|+..... ........++...-+.
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~l~~~fd~-------------------------------- 141 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHSAEEALLPGDIMALFDA-------------------------------- 141 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccchhhhHhhhhhhHhhCCE--------------------------------
Confidence 578999999999999999999999875433 2222222333111010
Q ss_pred EEEEe----cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 422 RVLAR----SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 422 ~v~~r----~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+.+. ..|+ ..+.+...++ ++..++.+++|||...|+.+-+.||+-.
T Consensus 142 v~~s~~~~~~KP~--p~~~~~~~~~-~g~~~~~~l~i~D~~~di~aA~~aG~~~ 192 (211)
T TIGR02247 142 VVESCLEGLRKPD--PRIYQLMLER-LGVAPEECVFLDDLGSNLKPAAALGITT 192 (211)
T ss_pred EEEeeecCCCCCC--HHHHHHHHHH-cCCCHHHeEEEcCCHHHHHHHHHcCCEE
Confidence 11111 1222 2223332222 4677888999999999999999999754
No 159
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.88 E-value=0.27 Score=45.28 Aligned_cols=110 Identities=17% Similarity=0.199 Sum_probs=73.4
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHc-----CCccCCCceEEeehhhHHHhhhcCchhhhHHH
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS---IATKC-----GIVKPGEDYLILEGKEFNRRVRDNNGEVQQNL 413 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~---ia~~~-----gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~ 413 (668)
+|..++++.+..+.+++.|++++-+|+|+.-.+.. ...+. ++ |.+. +.++...+..-
T Consensus 25 ~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~l--P~Gp-v~~sP~~l~~a------------ 89 (157)
T PF08235_consen 25 KDWTHPGAAELYRKIADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNL--PDGP-VLLSPDSLFSA------------ 89 (157)
T ss_pred chhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccC--CCCC-EEECCcchhhh------------
Confidence 37899999999999999999999999999655433 33333 33 2232 22222211110
Q ss_pred HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 414 LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 414 l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
+.. .+..+-..+.|...++.++...........+++|+..+|+.+-+++++.-
T Consensus 90 ---l~r--Evi~~~p~~fK~~~L~~l~~~f~~~~~pf~agfGN~~tDv~aY~~vGip~ 142 (157)
T PF08235_consen 90 ---LHR--EVISKDPEEFKIACLRDLRALFPPDGNPFYAGFGNRSTDVIAYKAVGIPK 142 (157)
T ss_pred ---hhc--cccccChHHHHHHHHHHHHHhcCCCCCeEEEecCCcHHHHHHHHHcCCCh
Confidence 000 23445455689888888865422246678899999999999999988753
No 160
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=94.77 E-value=0.12 Score=49.43 Aligned_cols=95 Identities=13% Similarity=0.095 Sum_probs=64.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.++++.|+ .+++++|+.+...+....+.+|+...-+.++..+ + +
T Consensus 84 ~~~~g~~~~L~~L~---~~~~i~Tn~~~~~~~~~l~~~gl~~~fd~i~~~~--~-------------------------~ 133 (184)
T TIGR01993 84 KPDPELRNLLLRLP---GRKIIFTNGDRAHARRALNRLGIEDCFDGIFCFD--T-------------------------A 133 (184)
T ss_pred CCCHHHHHHHHhCC---CCEEEEeCCCHHHHHHHHHHcCcHhhhCeEEEee--c-------------------------c
Confidence 36789999999998 4799999999999999999999843211111110 0 0
Q ss_pred EEe---cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 424 LAR---SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 424 ~~r---~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
-.+ ..| +.++.+...++ ++..++.+++|||...|+.+-+.||+..
T Consensus 134 ~~~~~~~KP--~p~~~~~~~~~-~~~~~~~~l~vgD~~~di~aA~~~G~~~ 181 (184)
T TIGR01993 134 NPDYLLPKP--SPQAYEKALRE-AGVDPERAIFFDDSARNIAAAKALGMKT 181 (184)
T ss_pred cCccCCCCC--CHHHHHHHHHH-hCCCccceEEEeCCHHHHHHHHHcCCEE
Confidence 000 133 22344433333 4778889999999999999999998754
No 161
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.57 E-value=0.19 Score=49.49 Aligned_cols=42 Identities=21% Similarity=0.251 Sum_probs=34.3
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHH---HHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINT---ARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t---a~~ia~~~gi~ 384 (668)
-+.-|++.+.++.+++.|++|+++|||.... +..-.++.|+.
T Consensus 119 apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~~ 163 (229)
T TIGR01675 119 APALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGFT 163 (229)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCCC
Confidence 3677999999999999999999999999765 44445567763
No 162
>PLN02151 trehalose-phosphatase
Probab=94.56 E-value=0.14 Score=53.79 Aligned_cols=67 Identities=15% Similarity=0.178 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHhhcCCCC---CEEEEEcCCccCHHHHhhC-----CccEeeCCCccHHHHHhcchhcccCCchHHHHHH
Q psy11770 430 SDKYTLVKGMIDSKISAGR---EVVAVTGDGTNDGPALKKA-----DVGFAMGITGTDVAKEASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~---~~v~~iGDg~ND~~mlk~A-----~vGIam~~~~~~~ak~~ad~vl~~~~~~~i~~~l 501 (668)
.+|...++.+++. +...+ ..++++||...|-.|++.. |+||-+| .+.. ...|++.+. +-+.+.++|
T Consensus 268 ~dKG~Av~~Ll~~-~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg-~~~k--~T~A~y~L~--dp~eV~~~L 341 (354)
T PLN02151 268 WDKGKALEFLLES-LGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVS-KYAK--ETNASYSLQ--EPDEVMEFL 341 (354)
T ss_pred CCHHHHHHHHHHh-cccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEec-cCCC--CCcceEeCC--CHHHHHHHH
Confidence 4899999998754 23222 2489999999999999853 6777776 3221 236788887 567777666
Q ss_pred H
Q psy11770 502 M 502 (668)
Q Consensus 502 ~ 502 (668)
.
T Consensus 342 ~ 342 (354)
T PLN02151 342 E 342 (354)
T ss_pred H
Confidence 4
No 163
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=94.22 E-value=0.12 Score=50.20 Aligned_cols=98 Identities=12% Similarity=0.165 Sum_probs=61.3
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
++.|++.+.++.|+++|+++.++|+-+.......... .++...-+. +.. ..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~~~~~~~~~l~~~fd~-v~~-s~-------------------------- 135 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLHTTFWPEEYPEVRAAADH-IYL-SQ-------------------------- 135 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhhHHHHHhhchhHHHhcCE-EEE-ec--------------------------
Confidence 4689999999999999999999999876654332221 232110000 000 00
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-+....| +.++.+...++ ++..++.++++||...|+.+-+.+|+...
T Consensus 136 ~~~~~KP--~p~~~~~~~~~-~~~~p~~~l~vgD~~~di~aA~~aG~~~i 182 (199)
T PRK09456 136 DLGMRKP--EARIYQHVLQA-EGFSAADAVFFDDNADNIEAANALGITSI 182 (199)
T ss_pred ccCCCCC--CHHHHHHHHHH-cCCChhHeEEeCCCHHHHHHHHHcCCEEE
Confidence 0011122 23344433333 57888999999999999999999997543
No 164
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=93.73 E-value=0.28 Score=45.89 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=66.3
Q ss_pred cCCCCCchHHHHHHHHHcCC--EEEEEcCC-------CHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHH
Q psy11770 342 EDPVRPEVPEAIKKCQRAGI--TIRMVTGD-------NINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQN 412 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI--~v~~~TGd-------~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~ 412 (668)
++++.++..+.+++|++.+. +++++|.. ....|..+.+.+|+.-
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIpv--------------------------- 109 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGIPV--------------------------- 109 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCCcE---------------------------
Confidence 46789999999999999987 59999986 4788999999999820
Q ss_pred HHhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCC
Q psy11770 413 LLDKVWPRLRVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKAD 468 (668)
Q Consensus 413 ~l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~ 468 (668)
..+....|.-..++.+.+.+.......+.+++|||- ..|+-|=...|
T Consensus 110 ---------l~h~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G 157 (168)
T PF09419_consen 110 ---------LRHRAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMG 157 (168)
T ss_pred ---------EEeCCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccC
Confidence 112234675556677766432122457899999997 56877766655
No 165
>PLN02645 phosphoglycolate phosphatase
Probab=93.49 E-value=0.28 Score=51.22 Aligned_cols=48 Identities=21% Similarity=0.276 Sum_probs=38.7
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 384 (668)
|.+.-.+.+-|++.++|+.|++.|++++++|++...+...++ +++|+.
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~ 87 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLN 87 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 344445677899999999999999999999999977777666 567763
No 166
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=93.28 E-value=0.1 Score=52.04 Aligned_cols=67 Identities=21% Similarity=0.325 Sum_probs=32.2
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCC---CCEEEEEcCCccCHHHHhhC------CccEeeCCCcc-HHHHHhcchhccc
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAG---REVVAVTGDGTNDGPALKKA------DVGFAMGITGT-DVAKEASDIILTD 491 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~---~~~v~~iGDg~ND~~mlk~A------~vGIam~~~~~-~~ak~~ad~vl~~ 491 (668)
+=.|..-..|...++.+++. +... ...++++||...|-.|++.. +++|-++ ... ..-..+|+|-+.+
T Consensus 157 vEvrp~~~~KG~av~~ll~~-~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~-~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 157 VEVRPPGVNKGSAVRRLLEE-LPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVG-SVSVGEKPTAASYRLDD 233 (235)
T ss_dssp EEEE-TT--HHHHHHHHHTT-S---------EEEEESSHHHHHHHHTTTTS----EEEEES------------------
T ss_pred EEEEeCCCChHHHHHHHHHh-cCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEE-eeccccccccccccccc
Confidence 34455555699999998654 1211 35799999999999999874 4577777 332 3344667776654
No 167
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=93.23 E-value=0.52 Score=46.57 Aligned_cols=98 Identities=16% Similarity=0.217 Sum_probs=73.0
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.++.|++.+.++.|++.|+.+.+.|+.+...+..+.+.+|+...-+. ++++.+...
T Consensus 85 ~~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~~~~L~~~gl~~~f~~--~v~~~dv~~---------------------- 140 (221)
T COG0637 85 LKPIPGVVELLEQLKARGIPLAVASSSPRRAAERVLARLGLLDYFDV--IVTADDVAR---------------------- 140 (221)
T ss_pred CCCCccHHHHHHHHHhcCCcEEEecCChHHHHHHHHHHccChhhcch--hccHHHHhc----------------------
Confidence 36889999999999999999999999999999999999999543221 122222211
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..|+-=....+. ++..+..+++|.|+.+.+.+-++||.-+
T Consensus 141 --~KP~Pd~yL~Aa~~-----Lgv~P~~CvviEDs~~Gi~Aa~aAGm~v 182 (221)
T COG0637 141 --GKPAPDIYLLAAER-----LGVDPEECVVVEDSPAGIQAAKAAGMRV 182 (221)
T ss_pred --CCCCCHHHHHHHHH-----cCCChHHeEEEecchhHHHHHHHCCCEE
Confidence 13344443344443 4678999999999999999999999544
No 168
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=92.57 E-value=0.31 Score=46.50 Aligned_cols=94 Identities=13% Similarity=0.110 Sum_probs=62.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+.|+ .+.++.|++. +++.++||.....+....++.|+...-+. ++.+++.
T Consensus 89 ~~~~-~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~~~fd~--i~~~~~~-------------------------- 138 (188)
T PRK10725 89 PLPL-IEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLRRYFDA--VVAADDV-------------------------- 138 (188)
T ss_pred CccH-HHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcHhHceE--EEehhhc--------------------------
Confidence 3454 6899999875 89999999999999999999998432111 1111110
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccE
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGF 471 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGI 471 (668)
.+..| +.++.....++ ++..+..+++|||..+|+.+-+.||+-.
T Consensus 139 ~~~KP--~p~~~~~~~~~-~~~~~~~~l~igDs~~di~aA~~aG~~~ 182 (188)
T PRK10725 139 QHHKP--APDTFLRCAQL-MGVQPTQCVVFEDADFGIQAARAAGMDA 182 (188)
T ss_pred cCCCC--ChHHHHHHHHH-cCCCHHHeEEEeccHhhHHHHHHCCCEE
Confidence 01122 22233333222 4667788999999999999999999754
No 169
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=91.94 E-value=1.9 Score=43.65 Aligned_cols=46 Identities=20% Similarity=0.278 Sum_probs=38.1
Q ss_pred EEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc
Q psy11770 336 LCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC 381 (668)
Q Consensus 336 lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~ 381 (668)
=|.+.-.+++=|++.++|+.|+++|++++++|.....+...+++++
T Consensus 16 DGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 16 DGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 3667777889999999999999999999999988877766554443
No 170
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=90.91 E-value=0.72 Score=46.57 Aligned_cols=132 Identities=13% Similarity=0.165 Sum_probs=81.8
Q ss_pred cCCCCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC--CccCCCceE-Eeehhh-------------------H
Q psy11770 342 EDPVRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCG--IVKPGEDYL-ILEGKE-------------------F 398 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g--i~~~~~~~i-~~~g~~-------------------~ 398 (668)
...+.++..+.++.|... ..-++|+|||+.........-.| +...++... ..+|+- +
T Consensus 38 ~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l 117 (266)
T COG1877 38 AAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAAIL 117 (266)
T ss_pred ccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHHHH
Confidence 456789999999999887 45799999999998888776333 344444433 333321 1
Q ss_pred HHhhhcCch-------------------hh------hHH-H------HhhhcCCcEEEEecCHhhHHHHHHHHHHhhcCC
Q psy11770 399 NRRVRDNNG-------------------EV------QQN-L------LDKVWPRLRVLARSSPSDKYTLVKGMIDSKISA 446 (668)
Q Consensus 399 ~~~~~~~~~-------------------~~------~~~-~------l~~~~~~~~v~~r~~p~~K~~iv~~l~~~~~~~ 446 (668)
.+.+..-.+ .. ... . +.-...+..|-+|.+-..|...++.+..+ ...
T Consensus 118 ~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~-~~~ 196 (266)
T COG1877 118 EYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDE-LPF 196 (266)
T ss_pred HHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhc-CCC
Confidence 111111000 00 000 0 11112344566777777899999987654 344
Q ss_pred CCCEEEEEcCCccCHHHHhhCC----ccEeeC
Q psy11770 447 GREVVAVTGDGTNDGPALKKAD----VGFAMG 474 (668)
Q Consensus 447 ~~~~v~~iGDg~ND~~mlk~A~----vGIam~ 474 (668)
.+..+++.||...|-.|++..+ .+|-+|
T Consensus 197 ~~~~~~~aGDD~TDE~~F~~v~~~~~~~v~v~ 228 (266)
T COG1877 197 DGRFPIFAGDDLTDEDAFAAVNKLDSITVKVG 228 (266)
T ss_pred CCCcceecCCCCccHHHHHhhccCCCceEEec
Confidence 4456889999999999999987 444455
No 171
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=90.79 E-value=1.1 Score=42.41 Aligned_cols=104 Identities=22% Similarity=0.251 Sum_probs=60.3
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC--CcE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP--RLR 422 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~~~ 422 (668)
+.+++.+++..|+++|++++|+|.-. |+... ..+..++..... . -...+.+.-. .-.
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQs-----------Gi~rg-----yf~~~~f~~~~~----~-m~~~l~~~gv~id~i 90 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQS-----------GIGRG-----YFTEADFDKLHN----K-MLKILASQGVKIDGI 90 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECCC-----------Ccccc-----CccHHHHHHHHH----H-HHHHHHHcCCccceE
Confidence 57999999999999999999999632 22110 111222221100 0 0011111100 112
Q ss_pred EEEecCHhh-------HHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCcc
Q psy11770 423 VLARSSPSD-------KYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVG 470 (668)
Q Consensus 423 v~~r~~p~~-------K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vG 470 (668)
.+|.-.|++ |.-++....++ ++.+.....+|||...|..+-..|+++
T Consensus 91 ~~Cph~p~~~c~cRKP~~gm~~~~~~~-~~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 91 LYCPHHPEDNCDCRKPKPGMLLSALKE-YNIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred EECCCCCCCCCcccCCChHHHHHHHHH-hCCCccceEEecCcHHHHHHHHHCCCC
Confidence 344444442 33344444443 467888999999999999999998876
No 172
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=89.61 E-value=0.25 Score=42.12 Aligned_cols=48 Identities=21% Similarity=0.247 Sum_probs=35.1
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 384 (668)
|.+...+++-|++.++|+.|+++|++++++|.....+...++ +++|+.
T Consensus 7 Gvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 7 GVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp TTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred cEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 344456778899999999999999999999987755544444 667774
No 173
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=89.13 E-value=0.74 Score=46.00 Aligned_cols=93 Identities=14% Similarity=0.136 Sum_probs=57.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.++++.|++. +++.++|..+.. .+..|+...-+. ++ .+.+
T Consensus 113 ~~~~gv~~~L~~L~~~-~~l~i~Tn~~~~-----~~~~gl~~~fd~-i~-~~~~-------------------------- 158 (238)
T PRK10748 113 DVPQATHDTLKQLAKK-WPLVAITNGNAQ-----PELFGLGDYFEF-VL-RAGP-------------------------- 158 (238)
T ss_pred CCCccHHHHHHHHHcC-CCEEEEECCCch-----HHHCCcHHhhce-eE-eccc--------------------------
Confidence 4678999999999875 899999986654 245666211111 00 0000
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCccEee
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVGFAM 473 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vGIam 473 (668)
..+..| +..+.....++ ++..++.+++|||+ ..|+.+-+.||+-...
T Consensus 159 ~~~~KP--~p~~~~~a~~~-~~~~~~~~~~VGD~~~~Di~~A~~aG~~~i~ 206 (238)
T PRK10748 159 HGRSKP--FSDMYHLAAEK-LNVPIGEILHVGDDLTTDVAGAIRCGMQACW 206 (238)
T ss_pred CCcCCC--cHHHHHHHHHH-cCCChhHEEEEcCCcHHHHHHHHHCCCeEEE
Confidence 011122 23344333322 47778899999999 5999999999976553
No 174
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=88.68 E-value=2 Score=42.27 Aligned_cols=95 Identities=17% Similarity=0.234 Sum_probs=63.1
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.+++.++++.+++. .+++++|.-....+....+++|+...-+.++..+ -
T Consensus 99 ~~~~~~~~~L~~l~~~-~~l~ilTNg~~~~~~~~l~~~gl~~~Fd~v~~s~----------------------------~ 149 (229)
T COG1011 99 PDYPEALEALKELGKK-YKLGILTNGARPHQERKLRQLGLLDYFDAVFISE----------------------------D 149 (229)
T ss_pred ccChhHHHHHHHHHhh-ccEEEEeCCChHHHHHHHHHcCChhhhheEEEec----------------------------c
Confidence 5678999999999999 9999999988888889999999743322221111 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADVG 470 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~vG 470 (668)
.....|..+ +-+...+. ++..++.+++|||+ .||+..-+.+|.-
T Consensus 150 ~g~~KP~~~--~f~~~~~~-~g~~p~~~l~VgD~~~~di~gA~~~G~~ 194 (229)
T COG1011 150 VGVAKPDPE--IFEYALEK-LGVPPEEALFVGDSLENDILGARALGMK 194 (229)
T ss_pred cccCCCCcH--HHHHHHHH-cCCCcceEEEECCChhhhhHHHHhcCcE
Confidence 112234322 22222222 46778899999997 6785777777753
No 175
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=88.29 E-value=1.1 Score=45.64 Aligned_cols=52 Identities=13% Similarity=0.262 Sum_probs=42.4
Q ss_pred CC-CchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhh
Q psy11770 345 VR-PEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKE 397 (668)
Q Consensus 345 l~-~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~ 397 (668)
+| |++.+++++|+++|+++.++|+...+.+....+++|+... -+.++.+|..
T Consensus 146 irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~Y-FdvIIs~Gdv 198 (301)
T TIGR01684 146 IRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRY-FDIIISGGHK 198 (301)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcc-cCEEEECCcc
Confidence 45 9999999999999999999999999999999999999532 2344444443
No 176
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=88.10 E-value=1.9 Score=48.14 Aligned_cols=39 Identities=28% Similarity=0.513 Sum_probs=32.0
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCH------------HHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNI------------NTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~------------~ta~~ia~~~gi 383 (668)
+.|++.+.|+.|+++|++++++|.-.. ..+..+.+++|+
T Consensus 198 l~pgV~e~L~~L~~~Gy~IvIvTNQ~gI~~G~~~~~~~~~ki~~iL~~lgi 248 (526)
T TIGR01663 198 IFPEIPEKLKELEADGFKICIFTNQGGIARGKINADDFKAKIEAIVAKLGV 248 (526)
T ss_pred cccCHHHHHHHHHHCCCEEEEEECCcccccCcccHHHHHHHHHHHHHHcCC
Confidence 469999999999999999999998655 345666777776
No 177
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=87.57 E-value=2 Score=47.78 Aligned_cols=101 Identities=17% Similarity=0.133 Sum_probs=62.5
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHH-cCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATK-CGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~-~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
+++++.+ .++++|.+ +++|+-....+..+|++ +|+.. ++ |.+++.. .++... . .+
T Consensus 111 l~~~a~~---~~~~~g~~-vvVSASp~~~Vepfa~~~LGid~----VI---gTeLev~---~~G~~T--------G--~i 166 (497)
T PLN02177 111 VHPETWR---VFNSFGKR-YIITASPRIMVEPFVKTFLGADK----VL---GTELEVS---KSGRAT--------G--FM 166 (497)
T ss_pred cCHHHHH---HHHhCCCE-EEEECCcHHHHHHHHHHcCCCCE----EE---ecccEEC---cCCEEe--------e--ee
Confidence 5555444 45567755 99999999999999987 89841 11 1111100 000000 0 01
Q ss_pred EE--ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEeeC
Q psy11770 424 LA--RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFAMG 474 (668)
Q Consensus 424 ~~--r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIam~ 474 (668)
-. .+.-++|.+-++.. +...... .+.||+.||.|||+.|+.+++++
T Consensus 167 ~g~~~c~Ge~Kv~rl~~~----~g~~~~~-~aYgDS~sD~plL~~a~e~y~V~ 214 (497)
T PLN02177 167 KKPGVLVGDHKRDAVLKE----FGDALPD-LGLGDRETDHDFMSICKEGYMVP 214 (497)
T ss_pred cCCCCCccHHHHHHHHHH----hCCCCce-EEEECCccHHHHHHhCCccEEeC
Confidence 11 13556788877743 2322223 68899999999999999999998
No 178
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=85.49 E-value=1.9 Score=43.89 Aligned_cols=50 Identities=14% Similarity=0.156 Sum_probs=40.6
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehh
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGK 396 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~ 396 (668)
.|++.++|++|+++|+++.++|+.+.+.+....+.+|+... -+.++..|.
T Consensus 150 dp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~y-FDvII~~g~ 199 (303)
T PHA03398 150 DPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGY-FDIIICGGR 199 (303)
T ss_pred ChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCcc-ccEEEECCC
Confidence 39999999999999999999998888888999999999532 234444444
No 179
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=84.66 E-value=0.55 Score=43.91 Aligned_cols=96 Identities=14% Similarity=0.053 Sum_probs=63.3
Q ss_pred cCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
.=..||++.+.++.|.+. +++++.|......|..+...++... ..+.
T Consensus 40 ~v~~RPgl~eFL~~l~~~-yei~I~Ts~~~~yA~~il~~ldp~~---~~f~----------------------------- 86 (162)
T TIGR02251 40 YVFKRPHVDEFLERVSKW-YELVIFTASLEEYADPVLDILDRGG---KVIS----------------------------- 86 (162)
T ss_pred EEEECCCHHHHHHHHHhc-CEEEEEcCCcHHHHHHHHHHHCcCC---CEEe-----------------------------
Confidence 335899999999999987 9999999999999999999888631 1110
Q ss_pred EEEEecC-HhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 422 RVLARSS-PSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 422 ~v~~r~~-p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
.+++|-+ ...|...++.|.. ++.....|+++||...|..+-+.+++-+.
T Consensus 87 ~~l~r~~~~~~~~~~~K~L~~--l~~~~~~vIiVDD~~~~~~~~~~NgI~i~ 136 (162)
T TIGR02251 87 RRLYRESCVFTNGKYVKDLSL--VGKDLSKVIIIDNSPYSYSLQPDNAIPIK 136 (162)
T ss_pred EEEEccccEEeCCCEEeEchh--cCCChhhEEEEeCChhhhccCccCEeecC
Confidence 0111100 0001113333321 35667789999999988877666655543
No 180
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=84.61 E-value=2 Score=42.57 Aligned_cols=40 Identities=20% Similarity=0.344 Sum_probs=31.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHH---HHHHHHHHcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNIN---TARSIATKCGI 383 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~---ta~~ia~~~gi 383 (668)
+.-|++.+.++.+++.|++|+.+|||+.. .+..-.++.|+
T Consensus 115 ~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~~nL~~~G~ 157 (229)
T PF03767_consen 115 PAIPGALELYNYARSRGVKVFFITGRPESQREATEKNLKKAGF 157 (229)
T ss_dssp EEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHHHHHHHHTT
T ss_pred cccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHHHHHHHcCC
Confidence 45578999999999999999999999855 33344556675
No 181
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=83.78 E-value=8.9 Score=45.50 Aligned_cols=38 Identities=13% Similarity=0.177 Sum_probs=31.0
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy11770 345 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCG 382 (668)
Q Consensus 345 l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 382 (668)
+.++..++++.|.+. +..|+++|||...+.......++
T Consensus 533 p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~ 571 (797)
T PLN03063 533 LHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYN 571 (797)
T ss_pred CCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCC
Confidence 667888999999765 68999999999999888775533
No 182
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=83.67 E-value=1.2 Score=39.60 Aligned_cols=33 Identities=18% Similarity=0.205 Sum_probs=29.2
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHH
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTAR 375 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~ 375 (668)
+++.+++.++++.++++|++++++|||+.....
T Consensus 23 ~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 23 VAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred cccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 568899999999999999999999999987543
No 183
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=83.62 E-value=2.1 Score=40.24 Aligned_cols=86 Identities=10% Similarity=0.078 Sum_probs=53.9
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
++.|++.+.++ ++.++|+-+........+++|+...-+. ++.+++. -
T Consensus 90 ~~~~g~~~~L~-------~~~i~Tn~~~~~~~~~l~~~~l~~~fd~--v~~~~~~------------------------~ 136 (175)
T TIGR01493 90 PPWPDSAAALA-------RVAILSNASHWAFDQFAQQAGLPWYFDR--AFSVDTV------------------------R 136 (175)
T ss_pred CCCCchHHHHH-------HHhhhhCCCHHHHHHHHHHCCCHHHHhh--hccHhhc------------------------C
Confidence 47889999998 3789999999888888899988321111 0111100 0
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
.....|+-=..+.+. ++..++.+++|||+..|+.+-+++
T Consensus 137 ~~KP~p~~f~~~~~~-----~~~~p~~~l~vgD~~~Di~~A~~~ 175 (175)
T TIGR01493 137 AYKPDPVVYELVFDT-----VGLPPDRVLMVAAHQWDLIGARKF 175 (175)
T ss_pred CCCCCHHHHHHHHHH-----HCCCHHHeEeEecChhhHHHHhcC
Confidence 112223221223333 467788999999999998876653
No 184
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=82.66 E-value=7.5 Score=39.25 Aligned_cols=41 Identities=24% Similarity=0.365 Sum_probs=31.6
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNIN----TARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~----ta~~ia~~~gi~ 384 (668)
.|.-|++.+..+.+++.|++|+++|||... |..++ ++.|+.
T Consensus 144 ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~~NL-~kaGy~ 188 (275)
T TIGR01680 144 APALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTEANL-KKAGYH 188 (275)
T ss_pred CCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHH-HHcCCC
Confidence 456789999999999999999999999854 33333 446763
No 185
>PTZ00445 p36-lilke protein; Provisional
Probab=81.28 E-value=13 Score=35.95 Aligned_cols=107 Identities=17% Similarity=0.173 Sum_probs=66.5
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.++|+.+..+++|+++||++.++|=-...+ + +.+..-..+.|.++.+....... ..... . .+
T Consensus 75 ~~tpefk~~~~~l~~~~I~v~VVTfSd~~~---------~-~~~~~~~~Isg~~li~~~lk~s~--~~~~i----~--~~ 136 (219)
T PTZ00445 75 SVTPDFKILGKRLKNSNIKISVVTFSDKEL---------I-PSENRPRYISGDRMVEAALKKSK--CDFKI----K--KV 136 (219)
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEEccchhh---------c-cccCCcceechHHHHHHHHHhcC--cccee----e--ee
Confidence 479999999999999999999999655443 1 12233345667766543221100 00000 0 11
Q ss_pred EE------------------ecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc
Q psy11770 424 LA------------------RSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 424 ~~------------------r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v 469 (668)
+| ...|+.|..=.+.++++ ++..++.+++|=|....+.+-+..|+
T Consensus 137 ~~yyp~~w~~p~~y~~~gl~KPdp~iK~yHle~ll~~-~gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 137 YAYYPKFWQEPSDYRPLGLDAPMPLDKSYHLKQVCSD-FNVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred eeeCCcccCChhhhhhhcccCCCccchHHHHHHHHHH-cCCCHHHeEeecCCHHHHHHHHHCCC
Confidence 21 22344544433555444 58889999999999999999888764
No 186
>KOG2882|consensus
Probab=78.96 E-value=27 Score=35.67 Aligned_cols=48 Identities=23% Similarity=0.308 Sum_probs=40.0
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH---HcCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIAT---KCGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~---~~gi~ 384 (668)
|.+...+.+-|++.++++.|++.|-++.++|.....+-...++ ++|+.
T Consensus 31 GVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~ 81 (306)
T KOG2882|consen 31 GVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFN 81 (306)
T ss_pred cceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCcc
Confidence 6777788999999999999999999999999988777666554 55664
No 187
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=76.29 E-value=9.9 Score=40.03 Aligned_cols=38 Identities=16% Similarity=0.254 Sum_probs=35.4
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHc-C
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKC-G 382 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~-g 382 (668)
..|++.+.++.|+++|+++.++|+-....+..+.+.+ |
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~~im~~l~g 223 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTDKGMKYLLG 223 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhhC
Confidence 3689999999999999999999999999999999996 6
No 188
>PLN02645 phosphoglycolate phosphatase
Probab=74.96 E-value=12 Score=39.04 Aligned_cols=56 Identities=13% Similarity=0.131 Sum_probs=35.8
Q ss_pred cCCCCCEEEEEcCCc-cCHHHHhhCCc---cEeeCCCccHHHH-----HhcchhcccCCchHHHHHH
Q psy11770 444 ISAGREVVAVTGDGT-NDGPALKKADV---GFAMGITGTDVAK-----EASDIILTDDNFSSIVKAV 501 (668)
Q Consensus 444 ~~~~~~~v~~iGDg~-ND~~mlk~A~v---GIam~~~~~~~ak-----~~ad~vl~~~~~~~i~~~l 501 (668)
++...+.++||||.. +|+.+-+.||+ +|.-|....+... ..+|+++. ++..+.+++
T Consensus 243 ~~~~~~~~~~VGD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~--~~~~l~~~~ 307 (311)
T PLN02645 243 FGIEKSQICMVGDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPENKIQPDFYTS--KISDFLTLK 307 (311)
T ss_pred cCCCcccEEEEcCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhccCCCCCCEEEC--CHHHHHHHh
Confidence 477888999999997 99999999994 3333421222222 23566665 555555433
No 189
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=74.72 E-value=6.5 Score=40.27 Aligned_cols=45 Identities=22% Similarity=0.343 Sum_probs=34.5
Q ss_pred eecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHH---HHHHcCCc
Q psy11770 340 GIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARS---IATKCGIV 384 (668)
Q Consensus 340 ~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~---ia~~~gi~ 384 (668)
.-.+++-+++.++|+.|++.|++++++||+...+... -.+++|+.
T Consensus 14 ~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~ 61 (279)
T TIGR01452 14 WLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFN 61 (279)
T ss_pred EcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCC
Confidence 3356677889999999999999999999976544333 34567774
No 190
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=74.40 E-value=2 Score=34.12 Aligned_cols=47 Identities=17% Similarity=0.251 Sum_probs=32.6
Q ss_pred cCCCCCEEEEEcCC-ccCHHHHhhCCc---cEeeCCCccHHHH---Hhcchhcc
Q psy11770 444 ISAGREVVAVTGDG-TNDGPALKKADV---GFAMGITGTDVAK---EASDIILT 490 (668)
Q Consensus 444 ~~~~~~~v~~iGDg-~ND~~mlk~A~v---GIam~~~~~~~ak---~~ad~vl~ 490 (668)
++.....++||||. ..|+.+-+.+|+ +|.-|....+... ..+|+++.
T Consensus 17 ~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~~~~pd~vv~ 70 (75)
T PF13242_consen 17 LGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKAEHKPDYVVD 70 (75)
T ss_dssp HTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHSSSTTSEEES
T ss_pred cCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhccCCCCCEEEC
Confidence 46678889999999 999999999984 3333322222332 46777766
No 191
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=74.36 E-value=8.9 Score=35.67 Aligned_cols=86 Identities=24% Similarity=0.320 Sum_probs=55.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHH----HHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNIN----TARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPR 420 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~----ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 420 (668)
+++-+++.|.-=++.|=++..+|||.+- +++.+|+...|... .-
T Consensus 115 PKevA~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk~Lak~F~i~~m--~p------------------------------ 162 (237)
T COG3700 115 PKEVARQLIDMHQRRGDAIYFVTGRTPGKTDTVSKTLAKNFHITNM--NP------------------------------ 162 (237)
T ss_pred hHHHHHHHHHHHHhcCCeEEEEecCCCCcccccchhHHhhcccCCC--cc------------------------------
Confidence 4556677777778899999999999864 35566666666322 11
Q ss_pred cEEEEecCH----hhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCc-cEe
Q psy11770 421 LRVLARSSP----SDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADV-GFA 472 (668)
Q Consensus 421 ~~v~~r~~p----~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~v-GIa 472 (668)
.+|+-..| -+|...++. ...-..-||+-||+.+-+.|++ ||-
T Consensus 163 -v~f~Gdk~k~~qy~Kt~~i~~---------~~~~IhYGDSD~Di~AAkeaG~RgIR 209 (237)
T COG3700 163 -VIFAGDKPKPGQYTKTQWIQD---------KNIRIHYGDSDNDITAAKEAGARGIR 209 (237)
T ss_pred -eeeccCCCCcccccccHHHHh---------cCceEEecCCchhhhHHHhcCcccee
Confidence 23332222 245444432 2344567999999999999984 443
No 192
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=74.09 E-value=21 Score=42.79 Aligned_cols=38 Identities=16% Similarity=0.246 Sum_probs=31.1
Q ss_pred CCCchHHHHHHHHHc-CCEEEEEcCCCHHHHHHHHHHcC
Q psy11770 345 VRPEVPEAIKKCQRA-GITIRMVTGDNINTARSIATKCG 382 (668)
Q Consensus 345 l~~~~~~~I~~l~~a-GI~v~~~TGd~~~ta~~ia~~~g 382 (668)
+.+++.++++.|.+. +..|+++|||...........++
T Consensus 623 p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 623 LHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 557888999999765 68899999999999888776544
No 193
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=73.28 E-value=15 Score=34.51 Aligned_cols=101 Identities=17% Similarity=0.217 Sum_probs=57.6
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEc-CCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVT-GDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~T-Gd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+-|++++.|+.|++.|+++.++| -+.+.-|+.+.+.+++........ . ..+..
T Consensus 45 ~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~~l~i~~~~~~~~-----~--------------------~~~~F 99 (169)
T PF12689_consen 45 SLYPDVPEILQELKERGVKLAVASRTDEPDWARELLKLLEIDDADGDGV-----P--------------------LIEYF 99 (169)
T ss_dssp ---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHHHTT-C-----------------------------------CCE
T ss_pred EeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHHhcCCCccccccc-----c--------------------chhhc
Confidence 467999999999999999999999 578899999999999951111000 0 00112
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
-+...-|..|..-.+.+.++ .+...+.++++=|-.......+. .||.
T Consensus 100 ~~~eI~~gsK~~Hf~~i~~~-tgI~y~eMlFFDDe~~N~~~v~~--lGV~ 146 (169)
T PF12689_consen 100 DYLEIYPGSKTTHFRRIHRK-TGIPYEEMLFFDDESRNIEVVSK--LGVT 146 (169)
T ss_dssp CEEEESSS-HHHHHHHHHHH-H---GGGEEEEES-HHHHHHHHT--TT-E
T ss_pred chhheecCchHHHHHHHHHh-cCCChhHEEEecCchhcceeeEe--cCcE
Confidence 23444566777777777654 46777888888876555555444 4443
No 194
>PF05822 UMPH-1: Pyrimidine 5'-nucleotidase (UMPH-1); InterPro: IPR006434 This family is a small group of metazoan sequences with sequences from Arabidopsis thaliana (Mouse-ear cress) and rice. The sequences represent pyrimidine 5-nucleotidases, apparently in reference to HSPC233, the Homo sapiens (Human) homologue []. The structure of mouse sequence has been reported []. This group of sequences was originally found during searches for members of the haloacid dehalogenase (HAD) superfamily (IPR005834 from INTERPRO). All of the conserved catalytic motifs [] are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches of that subfamily (IA-ID) as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.; GO: 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0005737 cytoplasm; PDB: 2BDU_B 2G07_A 2G06_A 2G0A_A 2Q4T_A 2G09_A 2G08_A 2VKQ_A 2CN1_A 2JGA_A.
Probab=72.89 E-value=9.7 Score=37.90 Aligned_cols=130 Identities=18% Similarity=0.216 Sum_probs=65.0
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRV 423 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v 423 (668)
.+|+++.+.++.|++.+|.+.+.|+-=..-...+-++.|...++-.++. +-=.+++ + ....-
T Consensus 90 ~LRdg~~~~f~~L~~~~IP~lIFSAGlgdvI~~vL~q~~~~~~Nv~VvS-N~M~Fd~-----~------------g~l~g 151 (246)
T PF05822_consen 90 MLRDGVEEFFDKLEEHNIPLLIFSAGLGDVIEEVLRQAGVFHPNVKVVS-NFMDFDE-----D------------GVLVG 151 (246)
T ss_dssp -B-BTHHHHHHHHHCTT--EEEEEEEEHHHHHHHHHHTT--BTTEEEEE-E-EEE-T-----T------------SBEEE
T ss_pred hhhcCHHHHHHHHHhcCCCEEEEeCCcHHHHHHHHHHcCCCCCCeEEEe-eeEEECC-----c------------ceEee
Confidence 4799999999999999999999998877777777888787655432221 1000100 0 00000
Q ss_pred EEe--cCHhhHHHHHH---HHHHhhcCCCCCEEEEEcCCccCHHHHhhC-Ccc--EeeCC-Cc-----cHHHHHhcchhc
Q psy11770 424 LAR--SSPSDKYTLVK---GMIDSKISAGREVVAVTGDGTNDGPALKKA-DVG--FAMGI-TG-----TDVAKEASDIIL 489 (668)
Q Consensus 424 ~~r--~~p~~K~~iv~---~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A-~vG--Iam~~-~~-----~~~ak~~ad~vl 489 (668)
|.. ..+-.|..-+- ..-+. -.....|+..||+.-|+.|-.-. +.. +.+|- |. -+.-+++-|+|+
T Consensus 152 F~~~lIH~~NKn~~~l~~~~~~~~--~~~R~NvlLlGDslgD~~Ma~G~~~~~~~lkIGFLn~~ve~~l~~Y~~~yDIVl 229 (246)
T PF05822_consen 152 FKGPLIHTFNKNESALEDSPYFKQ--LKKRTNVLLLGDSLGDLHMADGVPDEENVLKIGFLNDKVEENLEKYLEAYDIVL 229 (246)
T ss_dssp E-SS---TT-HHHHHHTTHHHHHC--TTT--EEEEEESSSGGGGTTTT-S--SEEEEEEEE-SSHHHHHHHHHCCSSEEE
T ss_pred cCCCceEEeeCCcccccCchHHHH--hccCCcEEEecCccCChHhhcCCCccccEEEEEecccCHHHHHHHHHhcCCEEE
Confidence 000 01122322111 00010 13456788899999999998765 322 22221 11 223557889999
Q ss_pred ccCC
Q psy11770 490 TDDN 493 (668)
Q Consensus 490 ~~~~ 493 (668)
.+|.
T Consensus 230 v~D~ 233 (246)
T PF05822_consen 230 VDDQ 233 (246)
T ss_dssp ET--
T ss_pred ECCC
Confidence 8664
No 195
>KOG3040|consensus
Probab=70.22 E-value=10 Score=36.29 Aligned_cols=51 Identities=22% Similarity=0.362 Sum_probs=42.1
Q ss_pred EEEEEEeecCCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCc
Q psy11770 334 TCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIV 384 (668)
Q Consensus 334 ~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~ 384 (668)
.+-|.+.++|..-|++.++++.|++++.+|..+|.-..++-..+. .++|+.
T Consensus 13 DlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~ 66 (262)
T KOG3040|consen 13 DLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFD 66 (262)
T ss_pred eccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCC
Confidence 566899999999999999999999999999999877766655554 456663
No 196
>KOG3085|consensus
Probab=69.09 E-value=16 Score=36.31 Aligned_cols=105 Identities=13% Similarity=0.165 Sum_probs=60.6
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEE
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVL 424 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~ 424 (668)
+-++..++++.||++|..+.++|.=.... ..+-..+|+... ++..+.... .
T Consensus 114 ~~~~~~~~lq~lR~~g~~l~iisN~d~r~-~~~l~~~~l~~~---------------------------fD~vv~S~e-~ 164 (237)
T KOG3085|consen 114 YLDGMQELLQKLRKKGTILGIISNFDDRL-RLLLLPLGLSAY---------------------------FDFVVESCE-V 164 (237)
T ss_pred eccHHHHHHHHHHhCCeEEEEecCCcHHH-HHHhhccCHHHh---------------------------hhhhhhhhh-h
Confidence 44566699999999998888888543322 255566666311 111110000 0
Q ss_pred EecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccCHHHHhhCCc-cEeeCCCccHHHH
Q psy11770 425 ARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TNDGPALKKADV-GFAMGITGTDVAK 482 (668)
Q Consensus 425 ~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND~~mlk~A~v-GIam~~~~~~~ak 482 (668)
.-..|+. +|.+..++. ++..++.++++||. .||...-+.+|. ++=+. ++....+
T Consensus 165 g~~KPDp--~If~~al~~-l~v~Pee~vhIgD~l~nD~~gA~~~G~~ailv~-~~~~~~~ 220 (237)
T KOG3085|consen 165 GLEKPDP--RIFQLALER-LGVKPEECVHIGDLLENDYEGARNLGWHAILVD-NSITALK 220 (237)
T ss_pred ccCCCCh--HHHHHHHHH-hCCChHHeEEecCccccccHhHHHcCCEEEEEc-cccchhh
Confidence 1123332 233322222 57789999999996 899999999884 34344 4444443
No 197
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=69.06 E-value=9.1 Score=39.18 Aligned_cols=28 Identities=14% Similarity=0.051 Sum_probs=23.7
Q ss_pred cCCCCCEEEEEcCC-ccCHHHHhhCCccE
Q psy11770 444 ISAGREVVAVTGDG-TNDGPALKKADVGF 471 (668)
Q Consensus 444 ~~~~~~~v~~iGDg-~ND~~mlk~A~vGI 471 (668)
++...+.++||||. ..|+.+-+.|++-.
T Consensus 215 ~~~~~~~~lmIGD~~~tDI~~A~~aGi~s 243 (279)
T TIGR01452 215 FSIDPARTLMVGDRLETDILFGHRCGMTT 243 (279)
T ss_pred hCCChhhEEEECCChHHHHHHHHHcCCcE
Confidence 46778899999999 59999999998543
No 198
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=68.83 E-value=6.7 Score=39.20 Aligned_cols=96 Identities=10% Similarity=0.133 Sum_probs=52.7
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcEEEE
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLRVLA 425 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~ 425 (668)
-++..++++.+++.|+++ ++|+.....+.......|. ..+.. .+...-.+.....
T Consensus 140 ~~~~~~~l~~l~~~g~~~-i~tN~d~~~~~~~~~~~~~------------g~~~~------------~i~~~g~~~~~~g 194 (242)
T TIGR01459 140 LDEFDELFAPIVARKIPN-ICANPDRGINQHGIYRYGA------------GYYAE------------LIKQLGGKVIYSG 194 (242)
T ss_pred HHHHHHHHHHHHhCCCcE-EEECCCEeccCCCceEecc------------cHHHH------------HHHHhCCcEecCC
Confidence 478899999999999997 7787665444322222221 11111 0111111111123
Q ss_pred ecCHhhHHHHHHHHHHhhcCC-CCCEEEEEcCC-ccCHHHHhhCCccE
Q psy11770 426 RSSPSDKYTLVKGMIDSKISA-GREVVAVTGDG-TNDGPALKKADVGF 471 (668)
Q Consensus 426 r~~p~~K~~iv~~l~~~~~~~-~~~~v~~iGDg-~ND~~mlk~A~vGI 471 (668)
..+|+ +.+...++ ++. ..+.++||||+ .+|+.+=+.|++-.
T Consensus 195 KP~~~----~~~~~~~~-~~~~~~~~~~~vGD~~~~Di~~a~~~G~~~ 237 (242)
T TIGR01459 195 KPYPA----IFHKALKE-CSNIPKNRMLMVGDSFYTDILGANRLGIDT 237 (242)
T ss_pred CCCHH----HHHHHHHH-cCCCCcccEEEECCCcHHHHHHHHHCCCeE
Confidence 33333 22222222 343 34689999999 69999999998754
No 199
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=61.11 E-value=16 Score=36.31 Aligned_cols=48 Identities=15% Similarity=0.197 Sum_probs=35.7
Q ss_pred EEEeecCCCCCchHHHHHHHHHcCCEEEEEc---CCCHHHHHHHHHH-cCCc
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRAGITIRMVT---GDNINTARSIATK-CGIV 384 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~aGI~v~~~T---Gd~~~ta~~ia~~-~gi~ 384 (668)
|.+.-.+.+-+++.++|+.++++|++++++| |+..........+ .|+.
T Consensus 7 GvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~ 58 (236)
T TIGR01460 7 GVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVD 58 (236)
T ss_pred CccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCC
Confidence 3333446677899999999999999999998 6666665554455 6763
No 200
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=60.97 E-value=43 Score=33.09 Aligned_cols=85 Identities=15% Similarity=0.125 Sum_probs=56.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH----HHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT----ARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWP 419 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t----a~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 419 (668)
++-||+.+.++...+.|..|..+|.|..+. ++.-.++.|+.......
T Consensus 122 k~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~~nLk~~g~~~~~~~~----------------------------- 172 (274)
T COG2503 122 KAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTIENLKSEGLPQVLESH----------------------------- 172 (274)
T ss_pred ccCccHHHHHHHHHhcCcEEEEEeccchhcccchhHHHHHHcCcccccccc-----------------------------
Confidence 456899999999999999999999998776 44455667774222111
Q ss_pred CcEEEEe--cCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhhC
Q psy11770 420 RLRVLAR--SSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKKA 467 (668)
Q Consensus 420 ~~~v~~r--~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~A 467 (668)
.++-+ .+.+...+.|+ ...++|+.+||..+|-......
T Consensus 173 --~llkk~~k~Ke~R~~~v~--------k~~~iVm~vGDNl~DF~d~~~k 212 (274)
T COG2503 173 --LLLKKDKKSKEVRRQAVE--------KDYKIVMLVGDNLDDFGDNAYK 212 (274)
T ss_pred --eEEeeCCCcHHHHHHHHh--------hccceeeEecCchhhhcchhhh
Confidence 11111 23334444443 2567899999999997655443
No 201
>PF00389 2-Hacid_dh: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; InterPro: IPR006139 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. The catalytic domain contains a number of conserved charged residues which may play a role in the catalytic mechanism. The NAD-binding domain is described in IPR006140 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 2DLD_A 2G76_B 3DC2_B 1YGY_B 3DDN_A 3KB6_B 3K5P_A 3EVT_A 1WWK_B 1GDH_A ....
Probab=53.59 E-value=1.6e+02 Score=26.00 Aligned_cols=28 Identities=18% Similarity=0.272 Sum_probs=21.3
Q ss_pred CCCEEEEEcCCcc--CHHHHhhCCccEeeC
Q psy11770 447 GREVVAVTGDGTN--DGPALKKADVGFAMG 474 (668)
Q Consensus 447 ~~~~v~~iGDg~N--D~~mlk~A~vGIam~ 474 (668)
.-+.+...|-|.| |..+++.-||-|+-.
T Consensus 60 ~Lk~I~~~~~G~d~id~~~a~~~gI~V~n~ 89 (133)
T PF00389_consen 60 NLKLISTAGAGVDNIDLEAAKERGIPVTNV 89 (133)
T ss_dssp T-SEEEESSSSCTTB-HHHHHHTTSEEEE-
T ss_pred eeEEEEEcccccCcccHHHHhhCeEEEEEe
Confidence 3467888899988 899999999999854
No 202
>KOG3109|consensus
Probab=51.04 E-value=1.1e+02 Score=29.80 Aligned_cols=102 Identities=15% Similarity=0.103 Sum_probs=67.6
Q ss_pred eecCCCCCc--hHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhh
Q psy11770 340 GIEDPVRPE--VPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKV 417 (668)
Q Consensus 340 ~~~d~l~~~--~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~ 417 (668)
-+++ ++|+ .+..+-.|++.+ -|+.|.-...-|..+.+++||..--+.+++++-....
T Consensus 95 Plq~-LkPD~~LRnlLL~l~~r~--k~~FTNa~k~HA~r~Lk~LGieDcFegii~~e~~np~------------------ 153 (244)
T KOG3109|consen 95 PLQD-LKPDPVLRNLLLSLKKRR--KWIFTNAYKVHAIRILKKLGIEDCFEGIICFETLNPI------------------ 153 (244)
T ss_pred cHhh-cCCCHHHHHHHHhCcccc--EEEecCCcHHHHHHHHHHhChHHhccceeEeeccCCC------------------
Confidence 3445 5544 456666666554 8999999999999999999996444444444322110
Q ss_pred cCCcEEEEecCHhhHHHHHHHHHHhhcCCC-CCEEEEEcCCccCHHHHhhCCc
Q psy11770 418 WPRLRVLARSSPSDKYTLVKGMIDSKISAG-REVVAVTGDGTNDGPALKKADV 469 (668)
Q Consensus 418 ~~~~~v~~r~~p~~K~~iv~~l~~~~~~~~-~~~v~~iGDg~ND~~mlk~A~v 469 (668)
+..++|..+|+-=-...+.. +.. ++.+.++-|+.+.+..-+..|.
T Consensus 154 --~~~~vcKP~~~afE~a~k~a-----gi~~p~~t~FfDDS~~NI~~ak~vGl 199 (244)
T KOG3109|consen 154 --EKTVVCKPSEEAFEKAMKVA-----GIDSPRNTYFFDDSERNIQTAKEVGL 199 (244)
T ss_pred --CCceeecCCHHHHHHHHHHh-----CCCCcCceEEEcCchhhHHHHHhccc
Confidence 12577877776433333332 444 8899999999999998888773
No 203
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=50.62 E-value=39 Score=34.03 Aligned_cols=112 Identities=15% Similarity=0.146 Sum_probs=66.1
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH---HHcCCccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCc
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTARSIA---TKCGIVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRL 421 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia---~~~gi~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 421 (668)
+.+++++.|+.+++.|+.+.-+|.+.+....... +++||.-.+.. ...+.......... ...-.-.+.+-
T Consensus 82 ie~~~~~~i~~lq~~~~~v~alT~~~~~~~~~t~~~Lk~~gi~fs~~~---~~~~~~~~~~~~~~----~~~~~~~~~~G 154 (252)
T PF11019_consen 82 IESDVPNIINSLQNKGIPVIALTARGPNMEDWTLRELKSLGIDFSSSS---FPEDGIISFPVFDS----ALSRAPSFYDG 154 (252)
T ss_pred cchhHHHHHHHHHHCCCcEEEEcCCChhhHHHHHHHHHHCCCCccccc---cccCcceecccccC----CCCCCceeecC
Confidence 5679999999999999999999999977654443 44677432221 00000000000000 00000000111
Q ss_pred EEEEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccCHHHHhh
Q psy11770 422 RVLARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTNDGPALKK 466 (668)
Q Consensus 422 ~v~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND~~mlk~ 466 (668)
.+|+ +..+|...+..+..+ .+..++.|++|-|....+..+..
T Consensus 155 Ilft--~~~~KG~~L~~fL~~-~~~~pk~IIfIDD~~~nl~sv~~ 196 (252)
T PF11019_consen 155 ILFT--GGQDKGEVLKYFLDK-INQSPKKIIFIDDNKENLKSVEK 196 (252)
T ss_pred eEEe--CCCccHHHHHHHHHH-cCCCCCeEEEEeCCHHHHHHHHH
Confidence 2232 457899999888776 47788899999999887765544
No 204
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=47.42 E-value=30 Score=32.02 Aligned_cols=41 Identities=20% Similarity=0.178 Sum_probs=36.9
Q ss_pred CCCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCCc
Q psy11770 343 DPVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 343 d~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi~ 384 (668)
=.+||++.+.++.|++. +++.+.|.-....|..+.+.++..
T Consensus 57 v~~rPgv~efL~~l~~~-yel~I~T~~~~~yA~~vl~~ldp~ 97 (156)
T TIGR02250 57 TKLRPFLHEFLKEASKL-YEMHVYTMGTRAYAQAIAKLIDPD 97 (156)
T ss_pred EEECCCHHHHHHHHHhh-cEEEEEeCCcHHHHHHHHHHhCcC
Confidence 35799999999999955 999999999999999999999873
No 205
>KOG2914|consensus
Probab=46.86 E-value=47 Score=32.68 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=62.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcC-CccCCCceEEeehhhHHHhhhcCchhhhHHHHhhhcCCcE
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCG-IVKPGEDYLILEGKEFNRRVRDNNGEVQQNLLDKVWPRLR 422 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~g-i~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~ 422 (668)
.+-||+.+.++.|+..|+.+.++|+.+..++..-....+ +...-+..+..+|.++..
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~~~~~~f~~~v~~d~~~v~~---------------------- 149 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHEDIFKNFSHVVLGDDPEVKN---------------------- 149 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhhHHHHhcCCCeecCCccccC----------------------
Confidence 356699999999999999999999997776655444444 322112222222222211
Q ss_pred EEEecCHhhHHHHHHHHHHhhcCCCC-CEEEEEcCCccCHHHHhhCCccEe
Q psy11770 423 VLARSSPSDKYTLVKGMIDSKISAGR-EVVAVTGDGTNDGPALKKADVGFA 472 (668)
Q Consensus 423 v~~r~~p~~K~~iv~~l~~~~~~~~~-~~v~~iGDg~ND~~mlk~A~vGIa 472 (668)
....|+-=....+. ++..+ +.++++.|..+=+.|-+.|+.=+-
T Consensus 150 --gKP~Pdi~l~A~~~-----l~~~~~~k~lVfeds~~Gv~aa~aagm~vi 193 (222)
T KOG2914|consen 150 --GKPDPDIYLKAAKR-----LGVPPPSKCLVFEDSPVGVQAAKAAGMQVV 193 (222)
T ss_pred --CCCCchHHHHHHHh-----cCCCCccceEEECCCHHHHHHHHhcCCeEE
Confidence 12233322223333 45666 888999999988888888885444
No 206
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=45.05 E-value=1.4e+02 Score=36.36 Aligned_cols=44 Identities=7% Similarity=0.038 Sum_probs=33.7
Q ss_pred hhHHHHHHHHHHhhcCCCCCEE-EEEcCCcc-CH-HHHhhCCccEeeC
Q psy11770 430 SDKYTLVKGMIDSKISAGREVV-AVTGDGTN-DG-PALKKADVGFAMG 474 (668)
Q Consensus 430 ~~K~~iv~~l~~~~~~~~~~~v-~~iGDg~N-D~-~mlk~A~vGIam~ 474 (668)
..|.+.++.|..+ ++..-..| +++||+.| |. .|+.--+-+|-+.
T Consensus 955 ASKgqAlRyL~~r-wgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~ 1001 (1050)
T TIGR02468 955 ASRSQALRYLFVR-WGIELANMAVFVGESGDTDYEGLLGGLHKTVILK 1001 (1050)
T ss_pred CCHHHHHHHHHHH-cCCChHHeEEEeccCCCCCHHHHhCCceeEEEEe
Confidence 3699999988665 67777777 55999999 94 4776778888765
No 207
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=44.70 E-value=10 Score=35.93 Aligned_cols=14 Identities=36% Similarity=0.368 Sum_probs=12.5
Q ss_pred EEcccccccccCce
Q psy11770 123 ICSDKTGTLTTNRM 136 (668)
Q Consensus 123 i~~DKTGTLT~n~m 136 (668)
+|||.+||||.+.+
T Consensus 1 v~fD~DGTL~~~~~ 14 (192)
T PF12710_consen 1 VIFDFDGTLTDSDS 14 (192)
T ss_dssp EEEESBTTTBSSHH
T ss_pred eEEecCcCeecCCC
Confidence 68999999999973
No 208
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=44.45 E-value=87 Score=32.31 Aligned_cols=64 Identities=14% Similarity=0.142 Sum_probs=39.5
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccC---HHHHhhCCccEeeCCC---ccHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TND---GPALKKADVGFAMGIT---GTDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND---~~mlk~A~vGIam~~~---~~~~ak~~ad~vl~ 490 (668)
|.-|||.--.++++. +.....|+.|+++|-+ .-= +.+|..++..|.+-.+ ..+.+...||+++.
T Consensus 137 ~~PcTp~ai~~ll~~---~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l~e~~~~ADIVIs 207 (296)
T PRK14188 137 LVPCTPLGCMMLLRR---VHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDLPAVCRRADILVA 207 (296)
T ss_pred CcCCCHHHHHHHHHH---hCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 456677765555554 2345789999999954 333 4456677777765411 22344567898776
No 209
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.72 E-value=1.4e+02 Score=30.81 Aligned_cols=64 Identities=16% Similarity=0.174 Sum_probs=40.1
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCC-ccC---HHHHhhCCccEeeCCCc---cHHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDG-TND---GPALKKADVGFAMGITG---TDVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg-~ND---~~mlk~A~vGIam~~~~---~~~ak~~ad~vl~ 490 (668)
|.-|||.-=.++++. +.....|+.|+++|-| .-= +.+|..+|..+.+-.+. ...+.+.||+++.
T Consensus 138 ~~PcTp~aii~lL~~---~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~e~~~~ADIVIs 208 (301)
T PRK14194 138 LTPCTPSGCLRLLED---TCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAKALCRQADIVVA 208 (301)
T ss_pred CCCCcHHHHHHHHHH---hCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHHHHHhcCCEEEE
Confidence 455677765555554 3346789999999997 333 44566677766544111 2334567898876
No 210
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=37.72 E-value=57 Score=28.39 Aligned_cols=39 Identities=21% Similarity=0.383 Sum_probs=30.5
Q ss_pred CCCchHHHHHHHHHcCC-EEEEEcCCCHHHHHHHHHHcCC
Q psy11770 345 VRPEVPEAIKKCQRAGI-TIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI-~v~~~TGd~~~ta~~ia~~~gi 383 (668)
..+.+.+.++++.+.|+ .+|+.+|...+.+...|++.|+
T Consensus 64 ~~~~~~~~v~~~~~~g~~~v~~~~g~~~~~~~~~a~~~gi 103 (116)
T PF13380_consen 64 PPDKVPEIVDEAAALGVKAVWLQPGAESEELIEAAREAGI 103 (116)
T ss_dssp -HHHHHHHHHHHHHHT-SEEEE-TTS--HHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEcchHHHHHHHHHHHcCC
Confidence 56789999999999998 5899999999999999999998
No 211
>PRK14174 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=35.21 E-value=1.5e+02 Score=30.64 Aligned_cols=63 Identities=13% Similarity=0.168 Sum_probs=37.9
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCcc---CHH-HHh------hCCccEeeCCCcc--HHHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN---DGP-ALK------KADVGFAMGITGT--DVAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~N---D~~-mlk------~A~vGIam~~~~~--~~ak~~ad~vl~ 490 (668)
|.-|||.--.++++. +.....|+.|+.+|-+.. -+. ||. .|.|-++.. +.. +..-..||+++.
T Consensus 138 ~~PcTp~ail~ll~~---y~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~atVt~~hs-~t~~l~~~~~~ADIvI~ 212 (295)
T PRK14174 138 FVSCTPYGILELLGR---YNIETKGKHCVVVGRSNIVGKPMANLMLQKLKESNCTVTICHS-ATKDIPSYTRQADILIA 212 (295)
T ss_pred cCCCCHHHHHHHHHH---hCCCCCCCEEEEECCCCcchHHHHHHHHhccccCCCEEEEEeC-CchhHHHHHHhCCEEEE
Confidence 445777755444443 334567999999999855 222 433 355566554 222 334578898876
No 212
>cd05017 SIS_PGI_PMI_1 The members of this protein family contain the SIS (Sugar ISomerase) domain and have both the phosphoglucose isomerase (PGI) and the phosphomannose isomerase (PMI) functions. These functions catalyze the reversible reactions of glucose 6-phosphate to fructose 6-phosphate, and mannose 6-phosphate to fructose 6-phosphate, respectively at an equal rate. This protein contains two SIS domains. This alignment is based on the first SIS domain.
Probab=34.82 E-value=67 Score=27.90 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=29.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHcCC
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINTARSIATKCGI 383 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia~~~gi 383 (668)
--.+++.++++.+++.|++++.+|++.+ ....+.+.|.
T Consensus 54 G~t~e~i~~~~~a~~~g~~iI~IT~~~~--l~~~~~~~~~ 91 (119)
T cd05017 54 GNTEETLSAVEQAKERGAKIVAITSGGK--LLEMAREHGV 91 (119)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHcCC
Confidence 3567899999999999999999998774 3345655553
No 213
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=32.25 E-value=1.1e+02 Score=28.43 Aligned_cols=33 Identities=21% Similarity=0.335 Sum_probs=27.9
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHHHHH
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTARSIA 378 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~~ia 378 (668)
.+.+.++++..++.|++++.+||++--....++
T Consensus 122 S~nVl~Ai~~Ak~~gm~vI~ltG~~GG~~~~~~ 154 (176)
T COG0279 122 SKNVLKAIEAAKEKGMTVIALTGKDGGKLAGLL 154 (176)
T ss_pred CHHHHHHHHHHHHcCCEEEEEecCCCccccccc
Confidence 578899999999999999999999865555444
No 214
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=32.13 E-value=3e+02 Score=27.97 Aligned_cols=27 Identities=30% Similarity=0.480 Sum_probs=24.9
Q ss_pred CCchHHHHHHHHHcCC-EEEEEcCCCHH
Q psy11770 346 RPEVPEAIKKCQRAGI-TIRMVTGDNIN 372 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI-~v~~~TGd~~~ 372 (668)
+|-..-.++++.++|| .++++||++..
T Consensus 35 KP~IqYiVeEa~~aGIe~i~iVTgr~K~ 62 (291)
T COG1210 35 KPLIQYIVEEAVAAGIEEILIVTGRGKR 62 (291)
T ss_pred chhHHHHHHHHHHcCCCEEEEEecCCcc
Confidence 7889999999999999 69999999976
No 215
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=29.67 E-value=2.5e+02 Score=27.77 Aligned_cols=28 Identities=25% Similarity=0.209 Sum_probs=21.3
Q ss_pred cCCCCCEE-EEEcCCc-cCHHHHhhCCccE
Q psy11770 444 ISAGREVV-AVTGDGT-NDGPALKKADVGF 471 (668)
Q Consensus 444 ~~~~~~~v-~~iGDg~-ND~~mlk~A~vGI 471 (668)
++.....+ +||||.. +|+.+-+.+++-.
T Consensus 201 ~~~~~~~~~~~IGD~~~~Di~~A~~~G~~~ 230 (236)
T TIGR01460 201 LQARPERRDVMVGDNLRTDILGAKNAGFDT 230 (236)
T ss_pred hCCCCccceEEECCCcHHHHHHHHHCCCcE
Confidence 35444554 9999998 8999999988644
No 216
>cd02071 MM_CoA_mut_B12_BD methylmalonyl CoA mutase B12 binding domain. This domain binds to B12 (adenosylcobamide), which initiates the conversion of succinyl CoA and methylmalonyl CoA by forming an adenosyl radical, which then undergoes a rearrangement exchanging a hydrogen atom with a group attached to a neighboring carbon atom. This family is present in both mammals and bacteria. Bacterial members are heterodimers and involved in the fermentation of pyruvate to propionate. Mammalian members are homodimers and responsible for the conversion of odd-chain fatty acids and branched-chain amino acids via propionyl CoA to succinyl CoA for further degradation.
Probab=29.66 E-value=59 Score=28.50 Aligned_cols=82 Identities=12% Similarity=0.169 Sum_probs=55.6
Q ss_pred HHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-E-EEE
Q psy11770 288 EPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-T-IRM 365 (668)
Q Consensus 288 ~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~-v~~ 365 (668)
.-+...|++|+.++-. .+.++.. +...+.+-.++++-.......+.+++.++.|+++|. + .++
T Consensus 21 ~~l~~~G~~vi~lG~~-vp~e~~~--------------~~a~~~~~d~V~iS~~~~~~~~~~~~~~~~L~~~~~~~i~i~ 85 (122)
T cd02071 21 RALRDAGFEVIYTGLR-QTPEEIV--------------EAAIQEDVDVIGLSSLSGGHMTLFPEVIELLRELGAGDILVV 85 (122)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHH--------------HHHHHcCCCEEEEcccchhhHHHHHHHHHHHHhcCCCCCEEE
Confidence 4578899999988754 2222111 011234556778777778888899999999999976 3 356
Q ss_pred EcCCCHHHHHHHHHHcCCc
Q psy11770 366 VTGDNINTARSIATKCGIV 384 (668)
Q Consensus 366 ~TGd~~~ta~~ia~~~gi~ 384 (668)
+-|..+..-..-.++.|+.
T Consensus 86 ~GG~~~~~~~~~~~~~G~d 104 (122)
T cd02071 86 GGGIIPPEDYELLKEMGVA 104 (122)
T ss_pred EECCCCHHHHHHHHHCCCC
Confidence 6676665556667789973
No 217
>cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain. ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only.
Probab=28.98 E-value=1.2e+02 Score=24.47 Aligned_cols=45 Identities=22% Similarity=0.231 Sum_probs=35.7
Q ss_pred EeecCCCCCchHHHHHHHHHcCCEEEE-EcCCCHHHHHHHHHHcCC
Q psy11770 339 IGIEDPVRPEVPEAIKKCQRAGITIRM-VTGDNINTARSIATKCGI 383 (668)
Q Consensus 339 ~~~~d~l~~~~~~~I~~l~~aGI~v~~-~TGd~~~ta~~ia~~~gi 383 (668)
+.+.+...+.+.+..+.|++.|+++.+ ..+++...-...|.+.|+
T Consensus 7 i~~~~~~~~~a~~~~~~Lr~~g~~v~~d~~~~~~~~~~~~a~~~g~ 52 (91)
T cd00860 7 IPVTDEHLDYAKEVAKKLSDAGIRVEVDLRNEKLGKKIREAQLQKI 52 (91)
T ss_pred EeeCchHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHcCC
Confidence 334556777888889999999999988 567777777788888887
No 218
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=28.83 E-value=97 Score=26.79 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=54.9
Q ss_pred HHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-E-EEE
Q psy11770 288 EPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-T-IRM 365 (668)
Q Consensus 288 ~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~-v~~ 365 (668)
.-+...|++|+.+... ++.++... .-.+.+-.++|+....++--+.+++.++.+|+.+- + .++
T Consensus 21 ~~l~~~G~~V~~lg~~-~~~~~l~~--------------~~~~~~pdvV~iS~~~~~~~~~~~~~i~~l~~~~~~~~~i~ 85 (119)
T cd02067 21 RALRDAGFEVIDLGVD-VPPEEIVE--------------AAKEEDADAIGLSGLLTTHMTLMKEVIEELKEAGLDDIPVL 85 (119)
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHH--------------HHHHcCCCEEEEeccccccHHHHHHHHHHHHHcCCCCCeEE
Confidence 4567899999877632 33222111 11234557888888777777999999999999976 4 467
Q ss_pred EcCCCHHHHHHHHHHcCCc
Q psy11770 366 VTGDNINTARSIATKCGIV 384 (668)
Q Consensus 366 ~TGd~~~ta~~ia~~~gi~ 384 (668)
+-|.....-...+++.|..
T Consensus 86 vGG~~~~~~~~~~~~~G~D 104 (119)
T cd02067 86 VGGAIVTRDFKFLKEIGVD 104 (119)
T ss_pred EECCCCChhHHHHHHcCCe
Confidence 7776655545678888873
No 219
>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=28.08 E-value=2.2e+02 Score=29.14 Aligned_cols=65 Identities=14% Similarity=0.161 Sum_probs=38.8
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCcc----CHHHHhhCCccEeeCCCcc---HHHHHhcchhccc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTN----DGPALKKADVGFAMGITGT---DVAKEASDIILTD 491 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~N----D~~mlk~A~vGIam~~~~~---~~ak~~ad~vl~~ 491 (668)
|.-|||.-=.++++. +.....|+.|+.+|-|.. =+.||...+.-|.+.-..+ ...-..||+++..
T Consensus 137 ~~PcTp~aii~lL~~---~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l~~~~~~ADIVV~a 208 (285)
T PRK14189 137 FRPCTPYGVMKMLES---IGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDLAAHTRQADIVVAA 208 (285)
T ss_pred CcCCCHHHHHHHHHH---cCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCHHHHhhhCCEEEEc
Confidence 455677655555544 334578999999999866 2445555554444331222 2345788988763
No 220
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=27.96 E-value=46 Score=31.73 Aligned_cols=29 Identities=31% Similarity=0.403 Sum_probs=23.4
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHH
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNIN 372 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~ 372 (668)
++-||+.+++++|.+.|..++++|+++..
T Consensus 73 ~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 73 PPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp -B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 46689999999999999999999988754
No 221
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=27.67 E-value=55 Score=30.31 Aligned_cols=25 Identities=36% Similarity=0.659 Sum_probs=21.2
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCC
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGD 369 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd 369 (668)
+.+++.++|++|++.|.+++|+|.-
T Consensus 30 ~~~~v~~~L~~l~~~Gy~IvIvTNQ 54 (159)
T PF08645_consen 30 FPPGVPEALRELHKKGYKIVIVTNQ 54 (159)
T ss_dssp C-TTHHHHHHHHHHTTEEEEEEEE-
T ss_pred cchhHHHHHHHHHhcCCeEEEEeCc
Confidence 3567999999999999999999963
No 222
>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=26.90 E-value=3.1e+02 Score=28.08 Aligned_cols=64 Identities=13% Similarity=0.155 Sum_probs=37.3
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccC----HHHHhhC--CccEeeCCCcc--HHHHHhcchhccc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND----GPALKKA--DVGFAMGITGT--DVAKEASDIILTD 491 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND----~~mlk~A--~vGIam~~~~~--~~ak~~ad~vl~~ 491 (668)
+.-|||.--.++++. +.....|+.|+.+|-+..= +.||... -|-++-. ... ...-..||+++..
T Consensus 136 ~~PcTp~avi~ll~~---~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs-~T~nl~~~~~~ADIvI~A 207 (282)
T PRK14182 136 PRPCTPAGVMRMLDE---ARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHS-RTADLAGEVGRADILVAA 207 (282)
T ss_pred CCCCCHHHHHHHHHH---hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCC-CCCCHHHHHhhCCEEEEe
Confidence 345677655555554 3345789999999988542 4456444 4455443 111 2233578887763
No 223
>PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis. This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D ....
Probab=26.87 E-value=1.7e+02 Score=23.84 Aligned_cols=47 Identities=21% Similarity=0.338 Sum_probs=36.7
Q ss_pred EEEeecC---CCCCchHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCC
Q psy11770 337 CVIGIED---PVRPEVPEAIKKCQRAGITIRMV-TGDNINTARSIATKCGI 383 (668)
Q Consensus 337 G~~~~~d---~l~~~~~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi 383 (668)
.++.+.+ ...+-+.+..+.|+++|+++.+- ++++......-|...|+
T Consensus 3 ~Ii~~~~~~~~~~~~a~~l~~~L~~~gi~v~~d~~~~~~~k~~~~a~~~g~ 53 (94)
T PF03129_consen 3 VIIPVGKKDEEIIEYAQELANKLRKAGIRVELDDSDKSLGKQIKYADKLGI 53 (94)
T ss_dssp EEEESSCSHHHHHHHHHHHHHHHHHTTSEEEEESSSSTHHHHHHHHHHTTE
T ss_pred EEEEeCCCcHHHHHHHHHHHHHHHHCCCEEEEECCCCchhHHHHHHhhcCC
Confidence 3445555 56677888899999999999888 56667777888888887
No 224
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=26.80 E-value=1e+02 Score=27.77 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=53.3
Q ss_pred HHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC--EEEE
Q psy11770 288 EPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI--TIRM 365 (668)
Q Consensus 288 ~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI--~v~~ 365 (668)
..+...|++|+-++...-.++-. +...|.+-.++|+-++--.--+..++.++.|+++|. ..++
T Consensus 23 ~~l~~~GfeVi~LG~~v~~e~~v---------------~aa~~~~adiVglS~l~~~~~~~~~~~~~~l~~~gl~~~~vi 87 (134)
T TIGR01501 23 HAFTNAGFNVVNLGVLSPQEEFI---------------KAAIETKADAILVSSLYGHGEIDCKGLRQKCDEAGLEGILLY 87 (134)
T ss_pred HHHHHCCCEEEECCCCCCHHHHH---------------HHHHHcCCCEEEEecccccCHHHHHHHHHHHHHCCCCCCEEE
Confidence 45678999999988654222111 112345667888888777667788999999999987 4566
Q ss_pred EcCCC---HH---HHHHHHHHcCC
Q psy11770 366 VTGDN---IN---TARSIATKCGI 383 (668)
Q Consensus 366 ~TGd~---~~---ta~~ia~~~gi 383 (668)
+-|-. .+ ....-++++|+
T Consensus 88 vGG~~vi~~~d~~~~~~~l~~~Gv 111 (134)
T TIGR01501 88 VGGNLVVGKQDFPDVEKRFKEMGF 111 (134)
T ss_pred ecCCcCcChhhhHHHHHHHHHcCC
Confidence 77742 11 12345788887
No 225
>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=25.74 E-value=4e+02 Score=27.30 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=37.9
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccC----HHHHhhCCccEeeCCCccH---HHHHhcchhcc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND----GPALKKADVGFAMGITGTD---VAKEASDIILT 490 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND----~~mlk~A~vGIam~~~~~~---~ak~~ad~vl~ 490 (668)
|.-|||..=.++++. +.....|+.|+.+|-+..= +.||...|.-|.+.-+.+. ..-..||+++.
T Consensus 138 ~~PcTp~avi~ll~~---y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~~~~~ADIvIs 208 (284)
T PRK14177 138 YLPCTPYGMVLLLKE---YGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPSIVRQADIIVG 208 (284)
T ss_pred CCCCCHHHHHHHHHH---hCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHHHHhhCCEEEE
Confidence 556777655555543 3346789999999988542 3455554444443312222 34578888776
No 226
>cd05008 SIS_GlmS_GlmD_1 SIS (Sugar ISomerase) domain repeat 1 found in Glucosamine 6-phosphate synthase (GlmS) and Glucosamine-6-phosphate deaminase (GlmD). The SIS domain is found in many phosphosugar isomerases and phosphosugar binding proteins. GlmS contains a N-terminal glutaminase domain and two C-terminal SIS domains and catalyzes the first step in hexosamine metabolism, converting fructose 6-phosphate into glucosamine 6-phosphate using glutamine as nitrogen source. The glutaminase domain hydrolyzes glutamine to glutamate and ammonia. Ammonia is transferred through a channel to the isomerase domain for glucosamine 6-phosphate synthesis. The end product of the pathway is N-acetylglucosamine, which plays multiple roles in eukaryotic cells including being a building block of bacterial and fungal cell walls. In the absence of glutamine, GlmS catalyzes the isomerization of fructose 6-phosphate into glucose 6- phosphate (PGI-like activity). Glucosamine-6-phosphate deaminase (GlmD) cont
Probab=25.24 E-value=68 Score=27.90 Aligned_cols=30 Identities=13% Similarity=0.082 Sum_probs=25.2
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT 373 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t 373 (668)
.-.+++.++++.+++.|.+++.+|+.....
T Consensus 57 G~t~e~~~~~~~a~~~g~~vi~iT~~~~s~ 86 (126)
T cd05008 57 GETADTLAALRLAKEKGAKTVAITNVVGST 86 (126)
T ss_pred cCCHHHHHHHHHHHHcCCeEEEEECCCCCh
Confidence 345689999999999999999999986543
No 227
>cd05014 SIS_Kpsf KpsF-like protein. KpsF is an arabinose-5-phosphate isomerase which contains SIS (Sugar ISomerase) domains. SIS domains are found in many phosphosugar isomerases and phosphosugar binding proteins. KpsF catalyzes the reversible reaction of ribulose 5-phosphate to arabinose 5-phosphate. This is the second step in the CMP-Kdo biosynthesis pathway.
Probab=23.97 E-value=62 Score=28.25 Aligned_cols=30 Identities=23% Similarity=0.297 Sum_probs=25.7
Q ss_pred CCCchHHHHHHHHHcCCEEEEEcCCCHHHH
Q psy11770 345 VRPEVPEAIKKCQRAGITIRMVTGDNINTA 374 (668)
Q Consensus 345 l~~~~~~~I~~l~~aGI~v~~~TGd~~~ta 374 (668)
-.+++.++++.+|+.|++++.+|+.+....
T Consensus 59 ~t~~~~~~~~~a~~~g~~vi~iT~~~~s~l 88 (128)
T cd05014 59 ETDELLNLLPHLKRRGAPIIAITGNPNSTL 88 (128)
T ss_pred CCHHHHHHHHHHHHCCCeEEEEeCCCCCch
Confidence 568899999999999999999999775443
No 228
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=23.46 E-value=1.2e+02 Score=27.21 Aligned_cols=81 Identities=14% Similarity=0.215 Sum_probs=54.6
Q ss_pred HHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-E-EEE
Q psy11770 288 EPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-T-IRM 365 (668)
Q Consensus 288 ~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~-v~~ 365 (668)
.-+..+|++|+.++...-. ++.. +...+.+-.++|+-.+.-.-.+..++.++.|++.|. . .++
T Consensus 25 ~~lr~~G~eVi~LG~~vp~-e~i~--------------~~a~~~~~d~V~lS~~~~~~~~~~~~~~~~L~~~~~~~~~i~ 89 (137)
T PRK02261 25 RALTEAGFEVINLGVMTSQ-EEFI--------------DAAIETDADAILVSSLYGHGEIDCRGLREKCIEAGLGDILLY 89 (137)
T ss_pred HHHHHCCCEEEECCCCCCH-HHHH--------------HHHHHcCCCEEEEcCccccCHHHHHHHHHHHHhcCCCCCeEE
Confidence 4567899999999854321 1110 111234667888888888888999999999999955 2 355
Q ss_pred EcCCC------HHHHHHHHHHcCC
Q psy11770 366 VTGDN------INTARSIATKCGI 383 (668)
Q Consensus 366 ~TGd~------~~ta~~ia~~~gi 383 (668)
+-|.. +.....-++++|+
T Consensus 90 vGG~~~~~~~~~~~~~~~l~~~G~ 113 (137)
T PRK02261 90 VGGNLVVGKHDFEEVEKKFKEMGF 113 (137)
T ss_pred EECCCCCCccChHHHHHHHHHcCC
Confidence 55644 3445567888886
No 229
>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=23.17 E-value=3.5e+02 Score=27.68 Aligned_cols=65 Identities=15% Similarity=0.246 Sum_probs=38.3
Q ss_pred EEecCHhhHHHHHHHHHHhhcCCCCCEEEEEcCCccC----HHHHhhCCccEeeCCCcc---HHHHHhcchhccc
Q psy11770 424 LARSSPSDKYTLVKGMIDSKISAGREVVAVTGDGTND----GPALKKADVGFAMGITGT---DVAKEASDIILTD 491 (668)
Q Consensus 424 ~~r~~p~~K~~iv~~l~~~~~~~~~~~v~~iGDg~ND----~~mlk~A~vGIam~~~~~---~~ak~~ad~vl~~ 491 (668)
|.-|||.--.++++.. .....|+.|+.+|-+..= +.||...|.-|.+.-+.+ ...-..||+++..
T Consensus 135 ~~PcTp~avi~lL~~~---~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~~~~~~ADIvI~A 206 (282)
T PRK14169 135 VVASTPYGIMALLDAY---DIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLKQLTKEADILVVA 206 (282)
T ss_pred CCCCCHHHHHHHHHHh---CCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHHHHHhhCCEEEEc
Confidence 4556777655555542 345689999999988542 445555554444331222 2344778987763
No 230
>COG5012 Predicted cobalamin binding protein [General function prediction only]
Probab=22.53 E-value=74 Score=31.09 Aligned_cols=83 Identities=10% Similarity=0.101 Sum_probs=57.1
Q ss_pred HHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCCEEEEE
Q psy11770 287 IEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGITIRMV 366 (668)
Q Consensus 287 ~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI~v~~~ 366 (668)
..-+...|++++-++.. .+.+++... ..|.+-.+++..++--.--++.++.++.|++.|+|--++
T Consensus 125 ~~ml~~aGfevidLG~d-vP~e~fve~--------------a~e~k~d~v~~SalMTttm~~~~~viE~L~eeGiRd~v~ 189 (227)
T COG5012 125 ATMLEAAGFEVIDLGRD-VPVEEFVEK--------------AKELKPDLVSMSALMTTTMIGMKDVIELLKEEGIRDKVI 189 (227)
T ss_pred HHHHHhCCcEEEecCCC-CCHHHHHHH--------------HHHcCCcEEechHHHHHHHHHHHHHHHHHHHcCCccCeE
Confidence 34567789999988843 333222111 112345778888887777788999999999999997666
Q ss_pred cC-CCHHHHHHHHHHcCCc
Q psy11770 367 TG-DNINTARSIATKCGIV 384 (668)
Q Consensus 367 TG-d~~~ta~~ia~~~gi~ 384 (668)
+| -........++++|-.
T Consensus 190 v~vGGApvtq~~a~~iGAD 208 (227)
T COG5012 190 VMVGGAPVTQDWADKIGAD 208 (227)
T ss_pred EeecCccccHHHHHHhCCC
Confidence 65 4444567788888874
No 231
>cd05710 SIS_1 A subgroup of the SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=22.41 E-value=81 Score=27.45 Aligned_cols=30 Identities=23% Similarity=0.151 Sum_probs=25.7
Q ss_pred CCCCchHHHHHHHHHcCCEEEEEcCCCHHH
Q psy11770 344 PVRPEVPEAIKKCQRAGITIRMVTGDNINT 373 (668)
Q Consensus 344 ~l~~~~~~~I~~l~~aGI~v~~~TGd~~~t 373 (668)
.-.+++.++++.+++.|.+++.+|+.....
T Consensus 58 G~t~~~~~~~~~a~~~g~~vi~iT~~~~s~ 87 (120)
T cd05710 58 GNTKETVAAAKFAKEKGATVIGLTDDEDSP 87 (120)
T ss_pred CCChHHHHHHHHHHHcCCeEEEEECCCCCc
Confidence 346899999999999999999999977544
No 232
>PF14336 DUF4392: Domain of unknown function (DUF4392)
Probab=21.40 E-value=1.7e+02 Score=30.21 Aligned_cols=38 Identities=16% Similarity=0.260 Sum_probs=28.5
Q ss_pred CCchHHHHHHHHHcCCEEEEEcCCCHHHHH-HHHHHcCC
Q psy11770 346 RPEVPEAIKKCQRAGITIRMVTGDNINTAR-SIATKCGI 383 (668)
Q Consensus 346 ~~~~~~~I~~l~~aGI~v~~~TGd~~~ta~-~ia~~~gi 383 (668)
.+++...-+.|+..|.+++++|.+....+. +..+.++.
T Consensus 62 P~GA~aLa~aL~~lG~~~~ivtd~~~~~~~~~~~~~~~~ 100 (291)
T PF14336_consen 62 PPGAAALARALQALGKEVVIVTDERCAPVVKAAVRAAGL 100 (291)
T ss_pred hHHHHHHHHHHHHcCCeEEEEECHHHHHHHHHHHHHHhh
Confidence 467777788999999999999987765544 45555555
No 233
>COG4420 Predicted membrane protein [Function unknown]
Probab=21.35 E-value=2.2e+02 Score=27.05 Aligned_cols=47 Identities=13% Similarity=0.167 Sum_probs=28.5
Q ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccchhhH
Q psy11770 12 EKKSVLQAKLTKLAIQIGYAGSTIAILTVVILISQYCVKKFVIEDEEWK 60 (668)
Q Consensus 12 ~~~s~lq~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 60 (668)
...|-.++..++++.+.+-..+++..+++ +++|..++.+...+.+|.
T Consensus 39 ~~~t~gdR~ad~ia~f~Gsw~fil~~~~~--ll~Wi~lNl~~~~~~~wD 85 (191)
T COG4420 39 DGETFGDRVADKIARFGGSWAFILTFTLL--LLLWIVLNLFLVPGLAWD 85 (191)
T ss_pred cccchhhhHHHHHHHHcCChHHHHHHHHH--HHHHHHHHHhhhcCCcCC
Confidence 44566777888888887666555554433 335555665555556663
No 234
>TIGR00640 acid_CoA_mut_C methylmalonyl-CoA mutase C-terminal domain. Methylmalonyl-CoA mutase (EC 5.4.99.2) catalyzes a reversible isomerization between L-methylmalonyl-CoA and succinyl-CoA. The enzyme uses an adenosylcobalamin cofactor. It may be a homodimer, as in mitochondrion, or a heterodimer with partially homologous beta chain that does not bind the adenosylcobalamin cofactor, as in Propionibacterium freudenreichii. The most similar archaeal sequences are separate chains, such as AF2215 and AF2219 of Archaeoglobus fulgidus, that correspond roughly to the first 500 and last 130 residues, respectively of known methylmalonyl-CoA mutases. This model describes the C-terminal domain subfamily. In a neighbor-joining tree (methylaspartate mutase S chain as the outgroup), AF2219 branches with a coenzyme B12-dependent enzyme known not to be 5.4.99.2.
Probab=20.76 E-value=1e+02 Score=27.51 Aligned_cols=83 Identities=13% Similarity=0.077 Sum_probs=55.9
Q ss_pred HHHHhhhcceeeEEEEeecccchhhhhhcccCCCCCCCcccccccCeEEEEEEeecCCCCCchHHHHHHHHHcCC-EE-E
Q psy11770 287 IEPMACDGLRTISIAYKDFVTDKAEINQVHIEGDPNWDDESNIVSHLTCLCVIGIEDPVRPEVPEAIKKCQRAGI-TI-R 364 (668)
Q Consensus 287 ~~~~~~~GlRvl~~A~k~l~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~lG~~~~~d~l~~~~~~~I~~l~~aGI-~v-~ 364 (668)
...|...|++|+-..... +.++.- +...|.+-..+|+-++...-.+..++.++.|+++|. ++ +
T Consensus 23 ~~~l~~~GfeVi~lg~~~-s~e~~v--------------~aa~e~~adii~iSsl~~~~~~~~~~~~~~L~~~g~~~i~v 87 (132)
T TIGR00640 23 ATAYADLGFDVDVGPLFQ-TPEEIA--------------RQAVEADVHVVGVSSLAGGHLTLVPALRKELDKLGRPDILV 87 (132)
T ss_pred HHHHHhCCcEEEECCCCC-CHHHHH--------------HHHHHcCCCEEEEcCchhhhHHHHHHHHHHHHhcCCCCCEE
Confidence 355788999998776432 111110 122356778899999888888899999999999986 33 5
Q ss_pred EEcCCCHHHHHHHHHHcCCc
Q psy11770 365 MVTGDNINTARSIATKCGIV 384 (668)
Q Consensus 365 ~~TGd~~~ta~~ia~~~gi~ 384 (668)
++-|-.+..-..-.+++|+.
T Consensus 88 ivGG~~~~~~~~~l~~~Gvd 107 (132)
T TIGR00640 88 VVGGVIPPQDFDELKEMGVA 107 (132)
T ss_pred EEeCCCChHhHHHHHHCCCC
Confidence 55554554445667888883
No 235
>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=20.75 E-value=2.4e+02 Score=28.91 Aligned_cols=43 Identities=14% Similarity=0.316 Sum_probs=30.4
Q ss_pred cCCCCCchHHHHHHHHHcCCE---EEEEcCCCHHHH------HHHHHHcCCc
Q psy11770 342 EDPVRPEVPEAIKKCQRAGIT---IRMVTGDNINTA------RSIATKCGIV 384 (668)
Q Consensus 342 ~d~l~~~~~~~I~~l~~aGI~---v~~~TGd~~~ta------~~ia~~~gi~ 384 (668)
.++++++.++.++.+++.|++ .++..||++.+. ...|+++|+.
T Consensus 11 A~~i~~~ik~~i~~l~~~g~~P~Laii~vg~d~as~~Yv~~k~k~a~~~Gi~ 62 (284)
T PRK14170 11 AKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQASRTYVRNKQKRTEEAGMK 62 (284)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCeEEEEEeCCCHHHHHHHHHHHHHHHHcCCE
Confidence 355677888888888887875 355568877653 3467788874
No 236
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=20.30 E-value=91 Score=32.59 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=37.0
Q ss_pred EEEeecCCCCCchHHHHHHHHHc----CCEEEEEcCCC---HHH-HHHHHHHcCC
Q psy11770 337 CVIGIEDPVRPEVPEAIKKCQRA----GITIRMVTGDN---INT-ARSIATKCGI 383 (668)
Q Consensus 337 G~~~~~d~l~~~~~~~I~~l~~a----GI~v~~~TGd~---~~t-a~~ia~~~gi 383 (668)
|.+.-.+++-+++.++++.|+.. |+++..+|... ..+ +..+.+++|+
T Consensus 9 GvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~ 63 (321)
T TIGR01456 9 GVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGV 63 (321)
T ss_pred CceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCC
Confidence 55666788899999999999998 99999999654 343 4455577887
No 237
>cd01019 ZnuA Zinc binding protein ZnuA. These proteins have been shown to function as initial receptors in the ABC uptake of Zn2+. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a single helix and bind their specific ligands in the cleft between these domains. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=20.09 E-value=2.5e+02 Score=28.69 Aligned_cols=52 Identities=19% Similarity=0.192 Sum_probs=39.4
Q ss_pred CeEEEEEEeecCCCC---CchHHHHHHHHHcCCEEEEE-cCCCHHHHHHHHHHcCC
Q psy11770 332 HLTCLCVIGIEDPVR---PEVPEAIKKCQRAGITIRMV-TGDNINTARSIATKCGI 383 (668)
Q Consensus 332 ~l~~lG~~~~~d~l~---~~~~~~I~~l~~aGI~v~~~-TGd~~~ta~~ia~~~gi 383 (668)
++..++..+....-. .+..+.++.+++.++++++. +.-+...+..++++.|+
T Consensus 197 gl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~~~~~~ia~~~g~ 252 (286)
T cd01019 197 GLTQAGVFTIDPEIDPGAKRLAKIRKEIKEKGATCVFAEPQFHPKIAETLAEGTGA 252 (286)
T ss_pred CCceeeeecCCCCCCCCHHHHHHHHHHHHHcCCcEEEecCCCChHHHHHHHHhcCc
Confidence 566777776644333 34457888899999998777 66788899999999997
Done!