Query psy11771
Match_columns 347
No_of_seqs 224 out of 2430
Neff 9.9
Searched_HMMs 29240
Date Fri Aug 16 18:33:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11771.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11771hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 6.1E-44 2.1E-48 320.2 27.8 194 136-329 115-308 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 2.8E-44 9.7E-49 321.3 23.6 254 2-331 44-300 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 3E-44 1E-48 321.8 22.0 253 2-331 38-295 (306)
4 2vpj_A Kelch-like protein 12; 100.0 1.1E-43 3.9E-48 317.2 22.5 196 135-330 105-300 (301)
5 1zgk_A Kelch-like ECH-associat 100.0 5E-42 1.7E-46 307.7 24.8 203 136-343 64-270 (308)
6 4asc_A Kelch repeat and BTB do 100.0 2.5E-41 8.5E-46 304.1 25.1 199 132-332 88-299 (315)
7 2woz_A Kelch repeat and BTB do 100.0 2.5E-41 8.4E-46 304.6 21.6 195 135-331 102-308 (318)
8 2xn4_A Kelch-like protein 2; s 100.0 1.4E-40 4.7E-45 297.4 24.4 196 136-331 55-252 (302)
9 3ii7_A Kelch-like protein 7; p 100.0 1.6E-39 5.3E-44 291.1 26.6 196 135-331 48-248 (306)
10 2uvk_A YJHT; unknown function, 100.0 2.5E-40 8.6E-45 302.6 21.1 197 135-331 58-317 (357)
11 2vpj_A Kelch-like protein 12; 100.0 1.8E-39 6.2E-44 289.9 25.4 197 135-331 55-254 (301)
12 4asc_A Kelch repeat and BTB do 100.0 2.3E-38 7.8E-43 284.8 23.9 197 135-331 38-244 (315)
13 2woz_A Kelch repeat and BTB do 100.0 3.9E-38 1.3E-42 283.6 24.1 197 135-331 49-254 (318)
14 2uvk_A YJHT; unknown function, 100.0 2.8E-36 9.6E-41 275.7 16.2 248 2-319 47-353 (357)
15 2zwa_A Leucine carboxyl methyl 100.0 1.1E-34 3.9E-39 286.3 17.2 203 134-344 441-674 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 1.4E-34 4.9E-39 285.6 16.5 265 59-343 315-615 (695)
17 1k3i_A Galactose oxidase precu 100.0 1.1E-30 3.7E-35 257.2 17.7 188 138-329 249-518 (656)
18 1k3i_A Galactose oxidase precu 99.9 1.5E-25 5E-30 220.7 18.9 189 137-329 190-464 (656)
19 3i3n_A Kelch-like protein 11; 98.8 2.6E-09 8.9E-14 93.5 4.4 68 43-110 196-271 (279)
20 3hve_A Gigaxonin; ubiquitin, c 98.2 2.7E-08 9.2E-13 85.9 -4.8 60 42-101 187-255 (256)
21 3mbr_X Glutamine cyclotransfer 98.1 0.00059 2E-08 57.6 18.9 162 134-316 22-190 (243)
22 3mbr_X Glutamine cyclotransfer 97.9 0.00049 1.7E-08 58.1 14.8 116 180-311 21-136 (243)
23 3nol_A Glutamine cyclotransfer 97.9 0.00075 2.6E-08 57.5 15.8 157 134-311 44-204 (262)
24 3nok_A Glutaminyl cyclase; bet 97.7 0.0018 6.1E-08 55.2 15.2 151 136-310 58-212 (268)
25 3dsm_A Uncharacterized protein 97.6 0.025 8.6E-07 49.8 22.4 158 137-313 48-217 (328)
26 3nol_A Glutamine cyclotransfer 97.6 0.00063 2.2E-08 58.0 11.0 113 183-311 46-158 (262)
27 3dsm_A Uncharacterized protein 97.5 0.019 6.5E-07 50.6 20.1 152 141-311 93-256 (328)
28 2iwa_A Glutamine cyclotransfer 97.4 0.023 8E-07 48.6 19.5 153 137-310 25-183 (266)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.3 0.039 1.3E-06 49.4 20.0 150 138-314 49-215 (376)
30 3nok_A Glutaminyl cyclase; bet 97.3 0.0029 9.8E-08 54.0 11.4 111 182-311 57-167 (268)
31 2eqx_A Kelch repeat and BTB do 96.9 7.2E-05 2.4E-09 54.7 -1.5 32 40-72 60-99 (105)
32 2iwa_A Glutamine cyclotransfer 96.9 0.039 1.3E-06 47.2 15.3 112 183-310 24-137 (266)
33 1pex_A Collagenase-3, MMP-13; 96.8 0.15 5.2E-06 41.7 18.6 143 137-310 28-194 (207)
34 3q7m_A Lipoprotein YFGL, BAMB; 96.7 0.29 1E-05 43.5 21.0 144 139-313 185-344 (376)
35 1l0q_A Surface layer protein; 96.7 0.022 7.6E-07 50.9 12.8 145 143-313 2-152 (391)
36 1l0q_A Surface layer protein; 96.5 0.036 1.2E-06 49.5 13.2 145 143-313 44-194 (391)
37 1rwi_B Serine/threonine-protei 96.3 0.42 1.4E-05 39.9 18.6 149 141-313 33-185 (270)
38 1itv_A MMP9; adaptive molecula 96.1 0.4 1.4E-05 38.7 17.2 143 137-310 11-176 (195)
39 1kb0_A Quinohemoprotein alcoho 96.1 0.51 1.7E-05 46.0 19.7 118 138-267 73-207 (677)
40 2ad6_A Methanol dehydrogenase 96.1 0.47 1.6E-05 45.3 19.0 119 138-267 58-193 (571)
41 3jrp_A Fusion protein of prote 96.1 0.19 6.4E-06 44.2 15.4 106 142-262 22-135 (379)
42 1q7f_A NHL, brain tumor CG1071 96.1 0.53 1.8E-05 39.8 18.9 153 142-314 40-200 (286)
43 3oyo_A Hemopexin fold protein 96.0 0.18 6.2E-06 41.8 13.6 139 141-307 12-197 (225)
44 1rwi_B Serine/threonine-protei 95.9 0.3 1E-05 40.8 15.0 145 142-311 77-225 (270)
45 1yiq_A Quinohemoprotein alcoho 95.8 0.72 2.5E-05 45.1 19.3 118 138-267 66-200 (689)
46 1kv9_A Type II quinohemoprotei 95.7 1.2 4.2E-05 43.3 20.1 118 138-267 62-195 (668)
47 1su3_A Interstitial collagenas 95.6 0.35 1.2E-05 44.6 15.2 141 137-312 267-436 (450)
48 3bws_A Protein LP49; two-domai 95.6 0.26 8.8E-06 44.5 14.2 139 159-313 102-248 (433)
49 3c7x_A Matrix metalloproteinas 95.6 0.56 1.9E-05 37.9 14.6 145 137-310 10-177 (196)
50 1qhu_A Protein (hemopexin); be 95.5 0.5 1.7E-05 43.6 15.7 134 142-308 158-331 (460)
51 3fm0_A Protein CIAO1; WDR39,SG 95.5 0.22 7.5E-06 43.8 13.1 155 141-315 26-188 (345)
52 1q7f_A NHL, brain tumor CG1071 95.4 1 3.4E-05 38.0 21.5 154 141-314 87-244 (286)
53 1k8k_C P40, ARP2/3 complex 41 95.4 0.32 1.1E-05 42.6 13.7 146 142-307 19-172 (372)
54 1got_B GT-beta; complex (GTP-b 95.4 0.8 2.7E-05 40.0 16.3 146 141-310 153-303 (340)
55 2z2n_A Virginiamycin B lyase; 95.3 1.1 3.8E-05 37.7 20.7 148 141-314 66-218 (299)
56 1ri6_A Putative isomerase YBHE 95.3 1.2 4E-05 38.3 17.1 161 143-321 141-323 (343)
57 2ovr_B FBW7, F-BOX/WD repeat p 95.2 0.64 2.2E-05 42.3 15.7 147 142-312 248-395 (445)
58 4ery_A WD repeat-containing pr 95.2 0.44 1.5E-05 40.9 13.9 145 142-311 34-183 (312)
59 1w6s_A Methanol dehydrogenase 95.2 0.97 3.3E-05 43.4 17.3 120 138-268 58-200 (599)
60 3vgz_A Uncharacterized protein 95.2 1.4 4.8E-05 38.1 18.7 149 142-313 152-308 (353)
61 1gxr_A ESG1, transducin-like e 95.2 0.57 1.9E-05 40.2 14.5 148 142-312 108-259 (337)
62 4ery_A WD repeat-containing pr 95.1 0.71 2.4E-05 39.5 15.0 145 142-311 76-226 (312)
63 3ba0_A Macrophage metalloelast 95.1 1.6 5.6E-05 38.9 17.4 145 137-313 185-355 (365)
64 2qc5_A Streptogramin B lactona 95.1 1.3 4.4E-05 37.3 19.5 148 142-314 30-181 (300)
65 3lp9_A LS-24; SEED albumin, pl 95.1 0.12 4.2E-06 42.9 9.4 140 141-309 14-202 (227)
66 2hqs_A Protein TOLB; TOLB, PAL 95.1 0.97 3.3E-05 40.9 16.3 144 158-316 247-395 (415)
67 2hqs_A Protein TOLB; TOLB, PAL 95.0 0.71 2.4E-05 41.8 15.1 158 142-316 189-352 (415)
68 3dwl_C Actin-related protein 2 95.0 0.044 1.5E-06 48.7 6.8 148 142-309 22-178 (377)
69 2z2n_A Virginiamycin B lyase; 95.0 1.4 4.8E-05 37.0 19.5 150 141-314 24-176 (299)
70 1p22_A F-BOX/WD-repeat protein 95.0 0.22 7.7E-06 45.3 11.7 105 189-310 222-327 (435)
71 3bws_A Protein LP49; two-domai 95.0 0.51 1.8E-05 42.5 14.1 156 142-313 223-395 (433)
72 3odt_A Protein DOA1; ubiquitin 94.9 0.81 2.8E-05 38.8 14.7 148 142-316 154-304 (313)
73 1yiq_A Quinohemoprotein alcoho 94.9 0.63 2.2E-05 45.5 15.4 119 184-314 65-200 (689)
74 2dg1_A DRP35, lactonase; beta 94.9 0.44 1.5E-05 41.3 13.1 154 141-308 54-213 (333)
75 3vgz_A Uncharacterized protein 94.8 1.8 6E-05 37.5 19.0 153 142-312 52-219 (353)
76 3v7d_B Cell division control p 94.8 0.87 3E-05 41.5 15.5 149 140-313 277-426 (464)
77 3ow8_A WD repeat-containing pr 94.8 0.72 2.5E-05 40.1 14.2 145 142-311 133-282 (321)
78 1gxr_A ESG1, transducin-like e 94.8 0.5 1.7E-05 40.6 13.1 147 142-311 62-217 (337)
79 1p22_A F-BOX/WD-repeat protein 94.8 0.48 1.6E-05 43.0 13.5 150 138-311 138-288 (435)
80 3v9f_A Two-component system se 94.8 0.92 3.1E-05 44.9 16.4 148 158-327 469-633 (781)
81 4a2l_A BT_4663, two-component 94.8 1.1 3.9E-05 44.3 17.1 133 159-315 472-621 (795)
82 3jrp_A Fusion protein of prote 94.7 0.88 3E-05 39.8 14.8 147 143-309 69-241 (379)
83 2ovr_B FBW7, F-BOX/WD repeat p 94.7 2.3 7.8E-05 38.5 17.9 151 141-309 287-443 (445)
84 4a2l_A BT_4663, two-component 94.7 1.6 5.5E-05 43.2 18.0 148 142-315 98-251 (795)
85 4aez_A CDC20, WD repeat-contai 94.6 0.47 1.6E-05 42.5 12.7 148 142-310 228-382 (401)
86 3g4e_A Regucalcin; six bladed 94.6 0.9 3.1E-05 38.9 14.0 175 142-340 64-258 (297)
87 2qc5_A Streptogramin B lactona 94.6 1.8 6.2E-05 36.4 20.5 147 142-314 72-223 (300)
88 1kv9_A Type II quinohemoprotei 94.5 0.8 2.7E-05 44.6 14.9 119 184-314 61-195 (668)
89 1jmx_B Amine dehydrogenase; ox 94.5 0.19 6.3E-06 43.8 9.6 154 142-313 10-180 (349)
90 1kb0_A Quinohemoprotein alcoho 94.5 0.76 2.6E-05 44.8 14.7 119 184-314 72-207 (677)
91 2ad6_A Methanol dehydrogenase 94.5 0.83 2.8E-05 43.5 14.6 120 184-314 57-193 (571)
92 2pm7_B Protein transport prote 94.5 1.1 3.8E-05 38.2 14.3 107 141-262 19-133 (297)
93 2pbi_B Guanine nucleotide-bind 94.4 2.4 8.3E-05 37.2 16.9 145 142-310 165-317 (354)
94 2ojh_A Uncharacterized protein 94.3 1.9 6.4E-05 35.9 15.4 159 142-315 95-265 (297)
95 3ow8_A WD repeat-containing pr 94.2 1.2 4E-05 38.7 14.1 146 142-311 91-240 (321)
96 1flg_A Protein (quinoprotein e 94.1 2.9 9.9E-05 39.9 17.7 117 138-266 64-200 (582)
97 1gen_A Gelatinase A; hydrolase 94.1 2 6.9E-05 35.2 17.2 145 137-310 35-204 (218)
98 3v7d_B Cell division control p 94.0 1.3 4.5E-05 40.3 14.6 104 189-310 279-383 (464)
99 4gqb_B Methylosome protein 50; 93.9 0.98 3.4E-05 39.8 13.0 152 138-310 88-248 (344)
100 1pby_B Quinohemoprotein amine 93.9 0.78 2.7E-05 39.4 12.2 140 158-312 11-167 (337)
101 3jro_A Fusion protein of prote 93.8 0.98 3.3E-05 44.5 14.1 106 142-262 20-133 (753)
102 3vl1_A 26S proteasome regulato 93.8 3.2 0.00011 36.9 16.6 110 137-264 103-215 (420)
103 2aq5_A Coronin-1A; WD40 repeat 93.7 1.4 4.7E-05 39.4 14.0 152 142-310 93-256 (402)
104 3ei3_B DNA damage-binding prot 93.7 1.7 5.7E-05 38.4 14.4 142 144-308 87-236 (383)
105 1vyh_C Platelet-activating fac 93.7 1 3.5E-05 40.6 13.1 145 142-312 119-269 (410)
106 3fm0_A Protein CIAO1; WDR39,SG 93.7 0.92 3.2E-05 39.7 12.5 138 142-294 72-216 (345)
107 1qhu_A Protein (hemopexin); be 93.6 1.2 4.3E-05 41.0 13.3 136 137-309 60-216 (460)
108 3v9f_A Two-component system se 93.5 4.3 0.00015 40.0 18.2 148 142-315 76-246 (781)
109 3ott_A Two-component system se 93.4 2.8 9.5E-05 41.2 16.7 139 142-308 482-626 (758)
110 3hfq_A Uncharacterized protein 93.4 0.93 3.2E-05 39.5 11.9 143 159-314 19-178 (347)
111 3azo_A Aminopeptidase; POP fam 93.3 3.5 0.00012 39.5 16.9 146 158-315 217-376 (662)
112 3fvz_A Peptidyl-glycine alpha- 93.1 3.9 0.00014 35.3 20.5 142 158-313 69-232 (329)
113 2hes_X YDR267CP; beta-propelle 93.1 1.2 4.2E-05 38.6 12.3 154 142-315 118-287 (330)
114 2pbi_B Guanine nucleotide-bind 92.9 2.6 9E-05 36.9 14.3 132 143-293 210-347 (354)
115 1itv_A MMP9; adaptive molecula 92.9 2.1 7.2E-05 34.4 12.3 103 184-309 11-128 (195)
116 3c5m_A Oligogalacturonate lyas 92.8 1.4 4.6E-05 38.9 12.4 151 158-315 168-336 (396)
117 3c5m_A Oligogalacturonate lyas 92.8 1.9 6.5E-05 38.0 13.3 150 158-315 216-391 (396)
118 1hxn_A Hemopexin, HPX; heme, b 92.7 3.6 0.00012 33.7 13.9 141 137-308 22-197 (219)
119 3bg1_A Protein SEC13 homolog; 92.7 0.55 1.9E-05 40.6 9.3 111 142-267 24-143 (316)
120 2aq5_A Coronin-1A; WD40 repeat 92.6 5 0.00017 35.6 15.9 150 144-310 145-301 (402)
121 1pgu_A Actin interacting prote 92.5 5.5 0.00019 37.3 16.9 139 143-308 456-614 (615)
122 4aez_A CDC20, WD repeat-contai 92.5 2.6 9E-05 37.5 13.9 133 158-310 113-250 (401)
123 4e54_B DNA damage-binding prot 92.5 0.61 2.1E-05 42.4 9.7 145 142-309 131-283 (435)
124 3vl1_A 26S proteasome regulato 92.4 0.73 2.5E-05 41.2 10.1 144 143-311 68-215 (420)
125 3lrv_A PRE-mRNA-splicing facto 92.4 5.1 0.00017 34.7 16.1 148 142-310 47-203 (343)
126 3u4y_A Uncharacterized protein 92.3 2 6.9E-05 36.8 12.6 143 142-307 9-159 (331)
127 2z3z_A Dipeptidyl aminopeptida 92.2 4.2 0.00015 39.2 15.9 152 158-315 235-398 (706)
128 3no2_A Uncharacterized protein 92.1 4.2 0.00014 34.4 14.0 148 142-313 4-161 (276)
129 1erj_A Transcriptional repress 92.1 1.8 6.1E-05 38.6 12.2 144 142-308 134-287 (393)
130 4g56_B MGC81050 protein; prote 92.1 1.2 4E-05 39.4 10.9 140 144-308 195-343 (357)
131 4g56_B MGC81050 protein; prote 92.1 1.6 5.3E-05 38.5 11.7 147 142-310 105-260 (357)
132 3iz6_a 40S ribosomal protein R 92.1 5.9 0.0002 34.9 15.7 147 141-309 216-376 (380)
133 2ghs_A AGR_C_1268P; regucalcin 92.1 3.8 0.00013 35.5 14.0 142 142-307 60-209 (326)
134 1w6s_A Methanol dehydrogenase 92.0 2.1 7.2E-05 41.0 13.0 120 184-314 57-199 (599)
135 3ei3_B DNA damage-binding prot 92.0 2.3 7.9E-05 37.4 12.8 143 142-309 130-283 (383)
136 1vyh_C Platelet-activating fac 92.0 3.6 0.00012 36.9 14.2 64 189-264 203-268 (410)
137 4aow_A Guanine nucleotide-bind 91.9 2.9 9.8E-05 35.8 13.1 143 144-309 186-338 (340)
138 1flg_A Protein (quinoprotein e 91.9 3 0.0001 39.7 14.0 117 184-313 63-200 (582)
139 3no2_A Uncharacterized protein 91.9 3 0.0001 35.4 12.8 149 138-314 43-203 (276)
140 2ynn_A Coatomer subunit beta'; 91.9 1.9 6.6E-05 36.8 11.7 143 142-308 24-172 (304)
141 1pjx_A Dfpase, DIISOPROPYLFLUO 91.9 5.2 0.00018 33.8 15.5 154 141-310 27-210 (314)
142 2dg1_A DRP35, lactonase; beta 91.8 2.7 9.2E-05 36.1 12.8 119 189-314 55-177 (333)
143 4gqb_B Methylosome protein 50; 91.8 2.4 8.3E-05 37.2 12.6 141 143-308 182-331 (344)
144 2p4o_A Hypothetical protein; p 91.8 5.5 0.00019 34.0 19.1 168 142-331 82-264 (306)
145 3hfq_A Uncharacterized protein 91.8 5.8 0.0002 34.2 15.1 156 141-316 150-327 (347)
146 1k8k_C P40, ARP2/3 complex 41 91.7 0.74 2.5E-05 40.2 9.0 106 189-309 19-128 (372)
147 1r5m_A SIR4-interacting protei 91.6 1.4 4.7E-05 39.1 10.9 140 144-310 218-363 (425)
148 1r5m_A SIR4-interacting protei 91.6 3.2 0.00011 36.6 13.4 146 142-311 160-322 (425)
149 3zwl_B Eukaryotic translation 91.6 2.7 9.4E-05 36.2 12.6 148 142-308 43-206 (369)
150 1pjx_A Dfpase, DIISOPROPYLFLUO 91.5 5.7 0.00019 33.6 14.4 147 143-310 83-258 (314)
151 2xdw_A Prolyl endopeptidase; a 91.5 7.7 0.00026 37.6 16.9 164 141-315 242-423 (710)
152 2ojh_A Uncharacterized protein 91.3 5.4 0.00018 32.9 14.0 155 142-315 52-213 (297)
153 1pex_A Collagenase-3, MMP-13; 91.2 5.1 0.00017 32.5 15.2 100 142-264 79-195 (207)
154 1sq9_A Antiviral protein SKI8; 91.2 3.4 0.00012 36.3 13.0 110 142-264 197-325 (397)
155 2hz6_A Endoplasmic reticulum t 91.2 0.1 3.5E-06 46.8 2.8 142 139-313 6-156 (369)
156 3frx_A Guanine nucleotide-bind 91.0 6.8 0.00023 33.5 14.6 144 141-310 75-229 (319)
157 4aow_A Guanine nucleotide-bind 90.8 6.6 0.00022 33.4 14.3 146 142-310 97-248 (340)
158 2hes_X YDR267CP; beta-propelle 90.8 7.4 0.00025 33.5 17.7 156 140-316 22-192 (330)
159 1erj_A Transcriptional repress 90.7 3.1 0.00011 37.0 12.3 104 189-311 134-241 (393)
160 4a11_B DNA excision repair pro 90.6 0.87 3E-05 40.3 8.5 146 142-309 55-219 (408)
161 3mkq_A Coatomer beta'-subunit; 90.5 2.6 8.8E-05 41.4 12.5 144 142-309 24-173 (814)
162 3dr2_A Exported gluconolactona 90.5 7.4 0.00025 33.1 14.3 177 142-341 96-294 (305)
163 3e5z_A Putative gluconolactona 90.4 7.2 0.00025 32.8 16.3 151 142-314 79-252 (296)
164 1sq9_A Antiviral protein SKI8; 90.4 8.5 0.00029 33.6 15.6 103 142-261 25-157 (397)
165 3hrp_A Uncharacterized protein 90.4 9.7 0.00033 34.2 16.3 148 141-309 140-299 (409)
166 4e54_B DNA damage-binding prot 90.2 1.3 4.4E-05 40.2 9.4 143 142-309 176-328 (435)
167 2z3z_A Dipeptidyl aminopeptida 89.9 6.8 0.00023 37.8 14.8 63 252-314 235-300 (706)
168 1ri6_A Putative isomerase YBHE 89.9 3.4 0.00012 35.3 11.5 151 143-313 5-166 (343)
169 3k26_A Polycomb protein EED; W 89.8 6.5 0.00022 33.7 13.4 104 190-310 85-194 (366)
170 3zwl_B Eukaryotic translation 89.8 3.4 0.00012 35.6 11.5 148 142-310 186-348 (369)
171 1yr2_A Prolyl oligopeptidase; 89.7 10 0.00036 36.9 16.1 165 140-316 276-449 (741)
172 2pm9_A Protein WEB1, protein t 89.7 5.4 0.00019 35.2 13.1 147 143-309 178-338 (416)
173 3b7f_A Glycosyl hydrolase, BNR 89.7 11 0.00036 33.6 17.0 143 160-316 33-216 (394)
174 3g4e_A Regucalcin; six bladed 89.6 8.6 0.00029 32.5 16.8 146 142-311 24-185 (297)
175 2pm7_B Protein transport prote 89.6 4.9 0.00017 34.0 12.2 149 143-312 67-244 (297)
176 2vdu_B TRNA (guanine-N(7)-)-me 89.6 11 0.00039 33.9 19.8 155 143-314 210-399 (450)
177 1got_B GT-beta; complex (GTP-b 89.5 9.6 0.00033 32.9 18.8 93 205-310 164-259 (340)
178 4a11_B DNA excision repair pro 89.4 3 0.0001 36.7 11.0 147 142-310 111-278 (408)
179 3c7x_A Matrix metalloproteinas 89.3 1.6 5.5E-05 35.2 8.2 103 185-309 11-128 (196)
180 3f3f_A Nucleoporin SEH1; struc 89.3 8.4 0.00029 32.5 13.6 29 283-316 317-346 (351)
181 2cn3_A Xyloglucanase, beta-1,4 89.3 3.4 0.00012 40.6 12.1 129 166-316 554-695 (737)
182 3b7f_A Glycosyl hydrolase, BNR 89.2 11 0.00039 33.4 19.1 157 142-319 67-274 (394)
183 4gga_A P55CDC, cell division c 89.1 11 0.00038 33.6 14.7 93 158-262 125-219 (420)
184 3mkq_A Coatomer beta'-subunit; 89.0 7.9 0.00027 37.9 14.7 145 142-311 108-262 (814)
185 3gre_A Serine/threonine-protei 89.0 12 0.00041 33.3 16.7 149 142-310 181-361 (437)
186 3dwl_C Actin-related protein 2 88.8 0.54 1.9E-05 41.4 5.6 107 189-310 22-133 (377)
187 2vdu_B TRNA (guanine-N(7)-)-me 88.8 13 0.00045 33.5 16.5 107 142-264 160-274 (450)
188 3bg1_A Protein SEC13 homolog; 88.7 3.2 0.00011 35.7 10.4 146 143-308 71-247 (316)
189 3k26_A Polycomb protein EED; W 88.7 11 0.00036 32.3 14.0 103 143-262 85-193 (366)
190 3oyo_A Hemopexin fold protein 88.6 9.1 0.00031 31.4 12.7 99 141-260 69-197 (225)
191 3azo_A Aminopeptidase; POP fam 88.5 9.1 0.00031 36.5 14.5 149 158-315 161-332 (662)
192 2fp8_A Strictosidine synthase; 88.5 10 0.00036 32.4 13.6 135 158-309 165-314 (322)
193 3jro_A Fusion protein of prote 88.4 1.9 6.5E-05 42.4 9.7 106 189-309 20-133 (753)
194 3ott_A Two-component system se 88.2 20 0.0007 34.9 20.6 144 141-314 72-226 (758)
195 3sfz_A APAF-1, apoptotic pepti 88.1 6.3 0.00021 40.9 13.8 144 141-310 625-776 (1249)
196 3scy_A Hypothetical bacterial 88.0 6.6 0.00022 34.1 12.2 110 145-261 15-129 (361)
197 3i2n_A WD repeat-containing pr 87.9 9.5 0.00033 32.6 13.1 150 143-311 31-202 (357)
198 2bkl_A Prolyl endopeptidase; m 87.9 20 0.00069 34.6 16.6 172 140-316 129-315 (695)
199 2pm9_A Protein WEB1, protein t 87.7 3.2 0.00011 36.7 10.1 151 143-311 126-297 (416)
200 1pgu_A Actin interacting prote 87.6 13 0.00043 34.8 14.6 143 145-309 175-329 (615)
201 3lp9_A LS-24; SEED albumin, pl 87.3 1.5 5.2E-05 36.2 6.9 102 140-262 70-202 (227)
202 3iuj_A Prolyl endopeptidase; h 87.2 22 0.00076 34.3 16.6 147 158-316 259-413 (693)
203 1ck7_A Protein (gelatinase A); 86.9 4.4 0.00015 38.8 10.7 144 137-309 448-616 (631)
204 3i2n_A WD repeat-containing pr 86.9 7.8 0.00027 33.1 11.9 142 143-308 80-243 (357)
205 3lrv_A PRE-mRNA-splicing facto 86.8 14 0.00049 31.7 15.9 153 142-313 138-299 (343)
206 3odt_A Protein DOA1; ubiquitin 86.7 13 0.00044 31.0 15.9 146 142-313 113-260 (313)
207 3pe7_A Oligogalacturonate lyas 86.5 6 0.00021 34.6 11.1 150 157-311 215-387 (388)
208 2ecf_A Dipeptidyl peptidase IV 86.5 7.4 0.00025 37.7 12.6 68 142-222 119-189 (741)
209 3mmy_A MRNA export factor; mRN 86.4 15 0.0005 31.4 17.4 142 143-309 54-200 (368)
210 3iz6_a 40S ribosomal protein R 86.4 14 0.00049 32.3 13.6 138 158-312 180-333 (380)
211 4ggc_A P55CDC, cell division c 86.4 13 0.00046 31.0 13.4 82 158-246 45-128 (318)
212 2bkl_A Prolyl endopeptidase; m 86.0 26 0.00087 33.8 16.7 104 204-314 251-357 (695)
213 1nir_A Nitrite reductase; hemo 85.8 7.7 0.00026 36.5 11.9 104 141-264 147-260 (543)
214 2ynn_A Coatomer subunit beta'; 85.7 15 0.00052 31.0 15.1 146 142-312 108-263 (304)
215 1jmx_B Amine dehydrogenase; ox 85.7 3.3 0.00011 35.6 8.8 68 189-266 10-79 (349)
216 1gen_A Gelatinase A; hydrolase 85.7 13 0.00045 30.3 13.2 99 142-263 87-204 (218)
217 3hxj_A Pyrrolo-quinoline quino 85.6 16 0.00053 31.0 13.2 135 141-310 106-246 (330)
218 3e5z_A Putative gluconolactona 85.1 16 0.00054 30.6 14.7 144 141-311 124-289 (296)
219 1npe_A Nidogen, entactin; glyc 85.0 15 0.00052 30.3 21.1 148 142-312 90-242 (267)
220 2xdw_A Prolyl endopeptidase; a 84.9 29 0.001 33.5 20.4 150 158-314 208-375 (710)
221 1nir_A Nitrite reductase; hemo 84.6 17 0.00059 34.0 13.7 115 189-318 291-417 (543)
222 3dr2_A Exported gluconolactona 84.3 8.6 0.00029 32.7 10.7 151 143-310 57-226 (305)
223 2ecf_A Dipeptidyl peptidase IV 84.0 16 0.00054 35.4 13.6 116 141-269 46-189 (741)
224 2gop_A Trilobed protease; beta 83.4 10 0.00035 32.5 10.9 144 158-316 85-259 (347)
225 3u4y_A Uncharacterized protein 83.4 13 0.00044 31.5 11.5 108 189-313 9-122 (331)
226 1su3_A Interstitial collagenas 83.3 5.7 0.0002 36.5 9.4 102 184-309 267-386 (450)
227 3hxj_A Pyrrolo-quinoline quino 83.2 5.8 0.0002 33.8 9.2 136 142-314 70-211 (330)
228 3o4h_A Acylamino-acid-releasin 83.1 5 0.00017 37.8 9.4 154 141-314 159-320 (582)
229 3scy_A Hypothetical bacterial 82.8 8.8 0.0003 33.3 10.3 111 192-308 15-129 (361)
230 3dm0_A Maltose-binding peripla 82.8 24 0.00081 34.0 14.2 145 142-310 441-594 (694)
231 3fvz_A Peptidyl-glycine alpha- 82.7 22 0.00075 30.4 21.5 153 142-308 154-322 (329)
232 3sfz_A APAF-1, apoptotic pepti 82.5 7.6 0.00026 40.3 11.2 106 141-263 971-1076(1249)
233 1qks_A Cytochrome CD1 nitrite 82.1 28 0.00096 32.9 14.0 102 142-263 166-277 (567)
234 1yfq_A Cell cycle arrest prote 81.8 23 0.00077 30.0 14.5 144 142-308 22-179 (342)
235 2xbg_A YCF48-like protein; pho 81.8 24 0.00083 30.3 19.9 152 138-315 85-242 (327)
236 3o4h_A Acylamino-acid-releasin 81.8 17 0.00058 34.0 12.6 140 158-314 90-233 (582)
237 2hz6_A Endoplasmic reticulum t 81.8 0.57 1.9E-05 41.8 2.0 106 186-313 6-118 (369)
238 2xyi_A Probable histone-bindin 81.2 9 0.00031 34.4 10.0 102 192-308 196-309 (430)
239 3ba0_A Macrophage metalloelast 81.0 29 0.001 30.7 15.3 102 142-266 236-355 (365)
240 3pe7_A Oligogalacturonate lyas 81.0 16 0.00055 31.7 11.5 155 158-316 168-337 (388)
241 1hxn_A Hemopexin, HPX; heme, b 80.2 23 0.00077 28.9 11.3 103 137-261 67-197 (219)
242 4h5i_A Guanine nucleotide-exch 80.1 29 0.001 30.2 14.8 154 140-310 142-302 (365)
243 1yfq_A Cell cycle arrest prote 79.6 27 0.00092 29.5 15.0 104 142-261 67-179 (342)
244 2xzm_R RACK1; ribosome, transl 79.6 29 0.00098 29.8 15.3 140 142-306 87-242 (343)
245 2fp8_A Strictosidine synthase; 79.4 28 0.00097 29.6 13.9 155 142-314 91-275 (322)
246 3dm0_A Maltose-binding peripla 78.9 38 0.0013 32.5 14.2 103 192-312 533-636 (694)
247 3tc9_A Hypothetical hydrolase; 78.5 12 0.0004 34.0 9.8 143 142-307 149-300 (430)
248 3mmy_A MRNA export factor; mRN 78.4 30 0.001 29.3 14.6 101 142-262 97-200 (368)
249 1k32_A Tricorn protease; prote 78.2 26 0.00089 35.7 13.3 104 205-315 358-468 (1045)
250 2gop_A Trilobed protease; beta 77.9 21 0.00072 30.4 11.1 143 157-315 42-214 (347)
251 4gga_A P55CDC, cell division c 76.8 38 0.0013 29.9 12.8 92 205-308 125-218 (420)
252 3ju4_A Endo-N-acetylneuraminid 76.2 44 0.0015 30.1 13.5 127 166-292 268-406 (670)
253 1npe_A Nidogen, entactin; glyc 75.7 32 0.0011 28.2 18.1 148 142-310 47-200 (267)
254 1ijq_A LDL receptor, low-densi 75.6 37 0.0013 29.0 19.3 147 141-310 87-240 (316)
255 2p4o_A Hypothetical protein; p 75.4 36 0.0012 28.7 18.2 146 142-308 42-198 (306)
256 1pby_B Quinohemoprotein amine 74.9 29 0.001 29.0 11.1 103 205-312 11-128 (337)
257 2xbg_A YCF48-like protein; pho 74.3 41 0.0014 28.9 19.9 150 142-316 46-201 (327)
258 4ggc_A P55CDC, cell division c 72.9 39 0.0013 28.0 13.0 93 205-308 221-315 (318)
259 1nr0_A Actin interacting prote 72.6 64 0.0022 30.3 15.4 150 142-313 201-360 (611)
260 2xyi_A Probable histone-bindin 72.2 12 0.00041 33.5 8.1 147 142-312 243-414 (430)
261 1qks_A Cytochrome CD1 nitrite 72.0 67 0.0023 30.2 15.0 126 205-342 320-458 (567)
262 3frx_A Guanine nucleotide-bind 70.6 48 0.0016 28.0 12.7 66 189-266 76-143 (319)
263 2ghs_A AGR_C_1268P; regucalcin 70.4 50 0.0017 28.1 15.9 109 189-314 60-174 (326)
264 3hrp_A Uncharacterized protein 68.3 65 0.0022 28.7 17.0 144 142-306 230-408 (409)
265 3ju4_A Endo-N-acetylneuraminid 66.6 74 0.0025 28.7 18.7 112 134-245 285-406 (670)
266 2xzm_R RACK1; ribosome, transl 65.4 64 0.0022 27.5 15.6 105 142-263 38-151 (343)
267 1n7d_A LDL receptor, low-densi 65.2 81 0.0028 30.5 12.8 146 141-311 463-617 (699)
268 1yr2_A Prolyl oligopeptidase; 63.8 1.1E+02 0.0037 29.6 19.4 104 204-314 293-401 (741)
269 3gre_A Serine/threonine-protei 62.7 64 0.0022 28.4 11.0 106 189-310 181-294 (437)
270 3k6s_A Integrin alpha-X; cell 62.6 44 0.0015 34.4 10.6 155 180-336 334-516 (1095)
271 1ck7_A Protein (gelatinase A); 62.1 47 0.0016 31.8 10.0 103 184-309 448-567 (631)
272 4h5i_A Guanine nucleotide-exch 61.1 82 0.0028 27.2 17.1 107 188-307 229-342 (365)
273 3iuj_A Prolyl endopeptidase; h 58.9 1.3E+02 0.0044 28.8 18.0 102 205-314 259-365 (693)
274 3sjl_D Methylamine dehydrogena 58.4 62 0.0021 28.9 9.7 70 188-264 290-366 (386)
275 2p9w_A MAL S 1 allergenic prot 58.1 95 0.0032 27.0 13.3 138 139-292 144-304 (334)
276 1nr0_A Actin interacting prote 56.9 1.3E+02 0.0044 28.2 15.2 105 145-266 162-275 (611)
277 1k32_A Tricorn protease; prote 56.1 87 0.003 31.8 11.7 105 158-269 358-469 (1045)
278 3dw8_B Serine/threonine-protei 55.9 1E+02 0.0036 26.9 12.2 64 236-310 188-260 (447)
279 3ei3_A DNA damage-binding prot 55.6 1.9E+02 0.0067 29.9 15.0 117 204-331 863-980 (1158)
280 2ymu_A WD-40 repeat protein; u 54.8 1.3E+02 0.0044 27.5 12.6 102 189-310 437-541 (577)
281 3v64_C Agrin; beta propeller, 54.2 1.1E+02 0.0037 26.5 19.8 145 141-309 126-276 (349)
282 3a0f_A Xyloglucanase; beta-pro 53.5 1.7E+02 0.0058 28.6 19.0 159 143-314 146-351 (763)
283 2mad_H Methylamine dehydrogena 53.3 1.2E+02 0.004 26.6 16.8 68 236-310 278-352 (373)
284 2cn3_A Xyloglucanase, beta-1,4 51.6 1.8E+02 0.0061 28.3 21.9 188 143-340 85-318 (737)
285 3m0c_C LDL receptor, low-densi 51.4 1.9E+02 0.0065 28.5 20.4 143 141-308 481-632 (791)
286 2xe4_A Oligopeptidase B; hydro 51.1 1.8E+02 0.0062 28.2 15.5 150 157-315 294-465 (751)
287 2oaj_A Protein SNI1; WD40 repe 50.4 2E+02 0.007 28.6 13.7 23 142-169 446-468 (902)
288 3sjl_D Methylamine dehydrogena 50.0 59 0.002 29.0 8.2 70 236-312 291-367 (386)
289 3dw8_B Serine/threonine-protei 49.0 1.2E+02 0.0042 26.4 10.5 26 236-266 353-378 (447)
290 3v65_B Low-density lipoprotein 48.8 1.4E+02 0.0047 26.2 16.6 130 158-309 96-235 (386)
291 3c75_H MADH, methylamine dehyd 47.6 72 0.0025 28.8 8.5 114 143-264 85-212 (426)
292 2oit_A Nucleoporin 214KDA; NH2 47.3 1.6E+02 0.0053 26.3 11.4 177 129-320 91-296 (434)
293 2eqx_A Kelch repeat and BTB do 47.1 15 0.00051 25.9 3.1 47 48-96 24-71 (105)
294 1xfd_A DIP, dipeptidyl aminope 45.6 2E+02 0.0069 27.2 15.0 61 253-314 229-295 (723)
295 2mad_H Methylamine dehydrogena 45.4 1.5E+02 0.0053 25.8 14.2 68 189-263 278-352 (373)
296 3f3f_A Nucleoporin SEH1; struc 43.9 1.3E+02 0.0046 24.6 19.0 106 142-262 22-144 (351)
297 4hvt_A Ritya.17583.B, post-pro 42.4 2.5E+02 0.0084 27.3 14.1 148 158-317 269-438 (711)
298 4hw6_A Hypothetical protein, I 41.9 1.9E+02 0.0066 25.9 13.0 143 143-307 153-303 (433)
299 2b4w_A Hypothetical protein, c 41.1 1.5E+02 0.0052 25.1 8.5 58 233-291 37-97 (315)
300 3vu4_A KMHSV2; beta-propeller 40.8 1.7E+02 0.0058 24.9 15.2 64 189-262 206-272 (355)
301 3k6s_A Integrin alpha-X; cell 39.7 3.2E+02 0.011 28.1 12.6 173 137-312 338-546 (1095)
302 2oiz_A Aromatic amine dehydrog 39.0 1.6E+02 0.0056 25.3 9.3 71 236-316 265-342 (361)
303 3c75_H MADH, methylamine dehyd 36.2 1.3E+02 0.0044 27.2 8.2 115 189-311 84-212 (426)
304 1z68_A Fibroblast activation p 35.9 2.9E+02 0.0099 26.2 13.6 164 141-311 262-446 (719)
305 3i3n_A Kelch-like protein 11; 35.8 30 0.001 29.0 3.8 46 50-95 157-203 (279)
306 3p5b_L Low density lipoprotein 34.5 2.4E+02 0.0082 24.8 19.4 144 141-309 169-321 (400)
307 3a0f_A Xyloglucanase; beta-pro 34.3 3.3E+02 0.011 26.4 20.8 166 143-319 88-295 (763)
308 3ei3_A DNA damage-binding prot 34.1 4.2E+02 0.014 27.5 14.4 135 158-307 864-1000(1158)
309 3tc9_A Hypothetical hydrolase; 32.6 1.6E+02 0.0055 26.3 8.4 105 189-311 149-260 (430)
310 3v65_B Low-density lipoprotein 31.3 2.6E+02 0.009 24.3 19.8 143 141-309 126-278 (386)
311 3sov_A LRP-6, low-density lipo 30.0 2.5E+02 0.0087 23.7 19.0 144 141-310 89-240 (318)
312 1xfd_A DIP, dipeptidyl aminope 29.8 2E+02 0.0069 27.2 9.1 104 159-268 38-150 (723)
313 3v4v_A Integrin alpha-4; cell 29.4 2.8E+02 0.0097 26.2 9.7 152 181-335 167-348 (597)
314 3vu4_A KMHSV2; beta-propeller 29.3 2.6E+02 0.009 23.7 18.6 62 236-309 206-272 (355)
315 2oaj_A Protein SNI1; WD40 repe 28.7 4.4E+02 0.015 26.1 14.5 146 143-312 69-246 (902)
316 2qe8_A Uncharacterized protein 28.4 2.7E+02 0.0092 23.5 14.4 126 184-314 21-161 (343)
317 1ijq_A LDL receptor, low-densi 27.3 2.8E+02 0.0095 23.3 20.9 143 142-310 41-197 (316)
318 2qe8_A Uncharacterized protein 27.2 2.8E+02 0.0097 23.4 13.3 125 137-267 21-161 (343)
319 1fwx_A Nitrous oxide reductase 26.6 2.3E+02 0.0078 26.9 8.3 154 142-309 101-309 (595)
320 1sqj_A OXG-RCBH, oligoxylogluc 26.4 4.6E+02 0.016 25.6 18.4 152 159-315 144-340 (789)
321 1fwx_A Nitrous oxide reductase 25.3 1.4E+02 0.0047 28.4 6.5 152 158-319 254-442 (595)
322 1jof_A Carboxy-CIS,CIS-muconat 25.2 3.1E+02 0.011 23.2 18.5 160 158-328 167-363 (365)
323 2oiz_A Aromatic amine dehydrog 24.6 2.2E+02 0.0075 24.5 7.6 64 189-262 265-335 (361)
324 2be1_A Serine/threonine-protei 23.3 77 0.0026 27.7 4.2 107 187-310 8-132 (339)
325 2xe4_A Oligopeptidase B; hydro 23.1 5.1E+02 0.018 24.9 15.6 98 204-306 294-398 (751)
326 3v64_C Agrin; beta propeller, 23.0 3.5E+02 0.012 23.1 21.3 144 141-309 83-235 (349)
327 1sqj_A OXG-RCBH, oligoxylogluc 22.4 5.5E+02 0.019 25.0 22.4 166 143-319 77-280 (789)
328 3hx6_A Type 4 fimbrial biogene 21.8 5E+02 0.017 24.4 9.9 71 238-310 152-234 (570)
329 2cwj_A Putative endonuclease; 21.7 39 0.0013 24.5 1.7 25 1-26 1-25 (123)
330 4a5s_A Dipeptidyl peptidase 4 21.1 5.4E+02 0.019 24.5 10.6 160 142-315 27-250 (740)
331 4a0p_A LRP6, LRP-6, low-densit 20.7 5.4E+02 0.018 24.3 18.1 139 141-307 90-236 (628)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6.1e-44 Score=320.20 Aligned_cols=194 Identities=40% Similarity=0.677 Sum_probs=183.0
Q ss_pred EEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 136 IGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 136 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
+++++++++||++||.++...++++++||+.+++|++++++|.+|..++++.++++||++||.......+++++||+.++
T Consensus 115 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 194 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERN 194 (308)
T ss_dssp CEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred cEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCC
Confidence 47888999999999997766778999999999999999999999999999999999999999887766899999999999
Q ss_pred cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCC
Q psy11771 216 KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGS 295 (347)
Q Consensus 216 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~ 295 (347)
+|+.++++|.+|..++++.++++||++||.+.....+++++||+++++|+.++++|.+|..|++++++++||++||.++.
T Consensus 195 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~ 274 (308)
T 1zgk_A 195 EWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIYVLGGYDGH 274 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSS
T ss_pred eEeeCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECCEEEEEcCcCCC
Confidence 99999999999999999999999999999987777899999999999999999999999999999999999999998877
Q ss_pred CCccEEEEEeCCCCcEEEccCCCCCcceeEEEEE
Q psy11771 296 SSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVL 329 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 329 (347)
...+++++||+++++|+.+++||.+|.+|+++++
T Consensus 275 ~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~l 308 (308)
T 1zgk_A 275 TFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAVT 308 (308)
T ss_dssp CBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEC
T ss_pred cccceEEEEcCCCCEEeecCCCCCCcccceeEeC
Confidence 7788999999999999999999999999999875
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.8e-44 Score=321.33 Aligned_cols=254 Identities=34% Similarity=0.628 Sum_probs=216.8
Q ss_pred CCccceeeecccccccccceEEEecCeeEEEEEeeeCCCCCCCccCChHHHHHHHHHHHHhccccccccccCCCChHHHH
Q psy11771 2 PIAPMLYRRSRSGVAGLGKMLYVVGGFYCQLLVFYKYPLYGRPAVNSSCGNYILPTAWVSVALQLLRHVKLPLLARDFLM 81 (347)
Q Consensus 2 ~~~~~~~~r~~h~~~~~~~~~y~~GG~~~~~~~~~~~~l~~~~~v~~E~~v~~~~~~Wv~~~~~ll~~vr~~~l~~~~l~ 81 (347)
.+++||.+|.+|++++++++|||+||.... ...
T Consensus 44 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~-------------~~~---------------------------------- 76 (302)
T 2xn4_A 44 QVAELPSRRCRAGMVYMAGLVFAVGGFNGS-------------LRV---------------------------------- 76 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEESCBCSS-------------SBC----------------------------------
T ss_pred EcccCCcccccceEEEECCEEEEEeCcCCC-------------ccc----------------------------------
Confidence 357899999999999999999999998200 000
Q ss_pred HhcccccccccChhHHHHHHHHHHhccCcccccccccCccccccCCCCCCeEEEEEEEEECCEEEEEcccCCCCCCCeEE
Q psy11771 82 NSVESESLIKESTECQELLLEAMKYHLLPEQRSLLTTKRTQERKPEGMLPYVFAIGTCSFDGLLYACGGYDGASCLSSME 161 (347)
Q Consensus 82 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 161 (347)
.+.+.|+..+..|..++. .+.+|. .+++++++++||++||.++...+++++
T Consensus 77 -------------------~~~~~~d~~~~~W~~~~~-~p~~r~---------~~~~~~~~~~iyv~GG~~~~~~~~~~~ 127 (302)
T 2xn4_A 77 -------------------RTVDSYDPVKDQWTSVAN-MRDRRS---------TLGAAVLNGLLYAVGGFDGSTGLSSVE 127 (302)
T ss_dssp -------------------CCEEEEETTTTEEEEECC-CSSCCB---------SCEEEEETTEEEEEEEECSSCEEEEEE
T ss_pred -------------------cceEEECCCCCceeeCCC-CCcccc---------ceEEEEECCEEEEEcCCCCCccCceEE
Confidence 011223333334444432 233343 348888999999999998777778999
Q ss_pred EEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCC--ccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEE
Q psy11771 162 RYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTN--YQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAI 239 (347)
Q Consensus 162 ~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~--~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 239 (347)
+||+.+++|+.++++|.+|..++++.++++||++||..... ..+++++||+.+++|+.++++|.+|..+++++++++|
T Consensus 128 ~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i 207 (302)
T 2xn4_A 128 AYNIKSNEWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLL 207 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEE
T ss_pred EEeCCCCeEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEE
Confidence 99999999999999999999999999999999999986553 4788999999999999999999999999999999999
Q ss_pred EEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcEEEcc-CCC
Q psy11771 240 YCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLT-PML 318 (347)
Q Consensus 240 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~ 318 (347)
|++||.++....+++++||+++++|+.++++|.+|..|+++.++++||++||.++....+++++||+++++|+.++ .||
T Consensus 208 yv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~ 287 (302)
T 2xn4_A 208 YAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDKWTVVSSCMS 287 (302)
T ss_dssp EEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECSSCCS
T ss_pred EEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCeEEECCcccC
Confidence 9999998777788999999999999999999999999999999999999999887667789999999999999997 799
Q ss_pred CCcceeEEEEEcC
Q psy11771 319 TRRSSIGAAVLET 331 (347)
Q Consensus 319 ~~r~~~~~~~~~~ 331 (347)
.+|..|+++++++
T Consensus 288 ~~r~~~~~~~~~~ 300 (302)
T 2xn4_A 288 TGRSYAGVTVIDK 300 (302)
T ss_dssp SCCBSCEEEEEEC
T ss_pred cccccceEEEecc
Confidence 9999999999975
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3e-44 Score=321.80 Aligned_cols=253 Identities=21% Similarity=0.376 Sum_probs=217.3
Q ss_pred CCccceeeecccccccccceEEEecCeeEEEEEeeeCCCCCCCccCChHHHHHHHHHHHHhccccccccccCCCChHHHH
Q psy11771 2 PIAPMLYRRSRSGVAGLGKMLYVVGGFYCQLLVFYKYPLYGRPAVNSSCGNYILPTAWVSVALQLLRHVKLPLLARDFLM 81 (347)
Q Consensus 2 ~~~~~~~~r~~h~~~~~~~~~y~~GG~~~~~~~~~~~~l~~~~~v~~E~~v~~~~~~Wv~~~~~ll~~vr~~~l~~~~l~ 81 (347)
.+++||.+|.+|++++++++|||+||.. ....
T Consensus 38 ~~~~~p~~r~~~~~~~~~~~lyv~GG~~--------------~~~~---------------------------------- 69 (306)
T 3ii7_A 38 DIRCPFEKRRDAACVFWDNVVYILGGSQ--------------LFPI---------------------------------- 69 (306)
T ss_dssp ECCCCSCCCBSCEEEEETTEEEEECCBS--------------SSBC----------------------------------
T ss_pred cCCCCCcccceeEEEEECCEEEEEeCCC--------------CCCc----------------------------------
Confidence 4689999999999999999999999982 0000
Q ss_pred HhcccccccccChhHHHHHHHHHHhccCcccccccccCccccccCCCCCCeEEEEEEEEECCEEEEEcccC-CCCCCCeE
Q psy11771 82 NSVESESLIKESTECQELLLEAMKYHLLPEQRSLLTTKRTQERKPEGMLPYVFAIGTCSFDGLLYACGGYD-GASCLSSM 160 (347)
Q Consensus 82 ~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lyv~GG~~-~~~~~~~~ 160 (347)
.+.+.|+..+..|..++. .+.+|. .+++++++++||++||.+ +...++++
T Consensus 70 -------------------~~~~~~d~~~~~W~~~~~-~p~~r~---------~~~~~~~~~~iyv~GG~~~~~~~~~~~ 120 (306)
T 3ii7_A 70 -------------------KRMDCYNVVKDSWYSKLG-PPTPRD---------SLAACAAEGKIYTSGGSEVGNSALYLF 120 (306)
T ss_dssp -------------------CEEEEEETTTTEEEEEEC-CSSCCB---------SCEEEEETTEEEEECCBBTTBSCCCCE
T ss_pred -------------------ceEEEEeCCCCeEEECCC-CCcccc---------ceeEEEECCEEEEECCCCCCCcEeeeE
Confidence 011223333334443322 233343 348888999999999997 55677899
Q ss_pred EEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCc----cceEEEEeCCCCcEEecCCCCCCCcceEEEEEC
Q psy11771 161 ERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNY----QASVERLDPRMGKWAPVPSMSSRRSSCGVAALD 236 (347)
Q Consensus 161 ~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~----~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 236 (347)
++||+.+++|++++++|.+|..|+++.++++||++||...... .+++++||+.+++|+.++++|.+|..++++.++
T Consensus 121 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 200 (306)
T 3ii7_A 121 ECYDTRTESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVK 200 (306)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEET
T ss_pred EEEeCCCCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEEC
Confidence 9999999999999999999999999999999999999876644 789999999999999999999999999999999
Q ss_pred CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcEEEccC
Q psy11771 237 GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 237 ~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 316 (347)
++||++||.+.....+++++||+++++|+.++++|.+|..|++++++++||++||.++....+++++||+++++|+.+++
T Consensus 201 ~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 201 DKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp TEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred CEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 99999999987777899999999999999999999999999999999999999999877778899999999999999999
Q ss_pred CCCCcceeEEEEEcC
Q psy11771 317 MLTRRSSIGAAVLET 331 (347)
Q Consensus 317 ~~~~r~~~~~~~~~~ 331 (347)
+|.+|.+|+++++.+
T Consensus 281 ~~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 281 VRAFPVTSCLICVVD 295 (306)
T ss_dssp EECCSCTTCEEEEEE
T ss_pred cccccceeEEEEECC
Confidence 999999999988765
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.1e-43 Score=317.22 Aligned_cols=196 Identities=39% Similarity=0.722 Sum_probs=184.3
Q ss_pred EEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 135 AIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
.++++..+++||++||.++...++++++||+.+++|++++++|.+|..++++.++++||++||.......+++++||+.+
T Consensus 105 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~ 184 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHT 184 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCC
Confidence 34788899999999999877778899999999999999999999999999999999999999988777789999999999
Q ss_pred CcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCC
Q psy11771 215 GKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDG 294 (347)
Q Consensus 215 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~ 294 (347)
++|+.++++|.+|..++++.++++||++||.+.....+++++||+++++|+.++++|.+|..|+++.++++||++||.++
T Consensus 185 ~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~ 264 (301)
T 2vpj_A 185 GHWTNVTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRGRLYAIAGYDG 264 (301)
T ss_dssp TEEEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBCS
T ss_pred CcEEeCCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECCEEEEEcCcCC
Confidence 99999999999999999999999999999998777789999999999999999999999999999999999999999887
Q ss_pred CCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEc
Q psy11771 295 SSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLE 330 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 330 (347)
....+++++||+++++|+.+++||.+|+.|++++++
T Consensus 265 ~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 265 NSLLSSIECYDPIIDSWEVVTSMGTQRCDAGVCVLR 300 (301)
T ss_dssp SSBEEEEEEEETTTTEEEEEEEEEEEEESCEEEEEE
T ss_pred CcccccEEEEcCCCCeEEEcCCCCcccccceEEEeC
Confidence 666789999999999999999999999999999985
No 5
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=5e-42 Score=307.73 Aligned_cols=203 Identities=37% Similarity=0.683 Sum_probs=186.6
Q ss_pred EEEEEECCEEEEEccc----CCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEe
Q psy11771 136 IGTCSFDGLLYACGGY----DGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLD 211 (347)
Q Consensus 136 ~~~~~~~~~lyv~GG~----~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd 211 (347)
+++++++++||++||. ++...++++++||+.+++|++++++|.+|..++++.++++||++||.......+++++||
T Consensus 64 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 143 (308)
T 1zgk_A 64 LAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYE 143 (308)
T ss_dssp CEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEE
T ss_pred ceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEEC
Confidence 3788899999999998 555567889999999999999999999999999999999999999987776778999999
Q ss_pred CCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy11771 212 PRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 212 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
+.+++|+.++++|.+|..++++.++++||++||.+.....+++++||+.+++|+.++++|.+|..|++++++++||++||
T Consensus 144 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG 223 (308)
T 1zgk_A 144 PERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGG 223 (308)
T ss_dssp TTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCCeEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEECCEEEEEeC
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcCCCcceEEEEcCC
Q psy11771 292 NDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLETLNIEKRLLVAPP 343 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~ 343 (347)
.++....+++++||+++++|+.++++|.+|..++++++++ ++++..+
T Consensus 224 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~-----~i~v~GG 270 (308)
T 1zgk_A 224 YDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQG-----RIYVLGG 270 (308)
T ss_dssp BCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT-----EEEEECC
T ss_pred CCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEECC-----EEEEEcC
Confidence 9877678899999999999999999999999999998864 4555444
No 6
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=304.12 Aligned_cols=199 Identities=24% Similarity=0.404 Sum_probs=179.3
Q ss_pred eEEEEEEEEECCEEEEEcccC---CCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCc-CCCCccceE
Q psy11771 132 YVFAIGTCSFDGLLYACGGYD---GASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGF-DSTNYQASV 207 (347)
Q Consensus 132 ~~~~~~~~~~~~~lyv~GG~~---~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~-~~~~~~~~~ 207 (347)
.+..+++++++++||++||.+ +...++++++||+.+++|++++++|.+|..|+++.++++||++||. ......+++
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 167 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKM 167 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCE
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceE
Confidence 344558899999999999974 3566789999999999999999999999999999999999999998 445668999
Q ss_pred EEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEE
Q psy11771 208 ERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLL 287 (347)
Q Consensus 208 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ly 287 (347)
++||+.+++|+.++++|.+|..|++++++++||++||.+.....+++++||+++++|+.++++|.+|..|+++.++++||
T Consensus 168 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~l~ 247 (315)
T 4asc_A 168 CVYDPKKFEWKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVGTLY 247 (315)
T ss_dssp EEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEE
T ss_pred EEEeCCCCeEEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECCEEE
Confidence 99999999999999999999999999999999999999877778899999999999999999999999999999999999
Q ss_pred EEeccCCC---------CCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcCC
Q psy11771 288 TMGGNDGS---------SSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLETL 332 (347)
Q Consensus 288 v~GG~~~~---------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~ 332 (347)
++||.+.. ...+++++||+++++|+.+ ++.+|..++++++++.
T Consensus 248 v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~~ 299 (315)
T 4asc_A 248 AIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV--LREIAYAAGATFLPVR 299 (315)
T ss_dssp EEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE--ESCSSCCSSCEEEEEE
T ss_pred EECCccccCcCCccccccccCcEEEecCCCChhhhh--ccCCcCccceEEeCCE
Confidence 99997431 2457899999999999999 6778999999888763
No 7
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.5e-41 Score=304.56 Aligned_cols=195 Identities=27% Similarity=0.464 Sum_probs=177.3
Q ss_pred EEEEEEECCEEEEEcccC--CCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCC-CccceEEEEe
Q psy11771 135 AIGTCSFDGLLYACGGYD--GASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDST-NYQASVERLD 211 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~-~~~~~~~~yd 211 (347)
.+++++++++||++||.+ +...++++++||+.+++|++++++|.+|..|+++.++++||++||.... ...+++++||
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd 181 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYN 181 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEE
T ss_pred ccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEc
Confidence 348888999999999985 4456788999999999999999999999999999999999999997533 4578999999
Q ss_pred CCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy11771 212 PRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 212 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
+.+++|+.++++|.+|..|++++++++||++||.+.....+++++||+++++|+.++++|.+|..|+++.++++||++||
T Consensus 182 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 261 (318)
T 2woz_A 182 PKKGDWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAGSLYAIGG 261 (318)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCCEEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECCEEEEECC
Confidence 99999999999999999999999999999999998777778999999999999999999999999999999999999999
Q ss_pred cCCC---------CCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 292 NDGS---------SSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 292 ~~~~---------~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
.+.. ...+++++||+++++|+++ +|.+|+.|+++++++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~~~~r~~~~~~~~~~ 308 (318)
T 2woz_A 262 FAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--LKEIRYASGASCLAT 308 (318)
T ss_dssp BCCBC----CCBCCBCCCEEEEETTTTEEEEE--ESCCGGGTTCEEEEE
T ss_pred eeccCCCCceeccceeeeEEEEeCCCCEehhh--cccccccccceeeCC
Confidence 7642 3467899999999999999 789999999998865
No 8
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=297.41 Aligned_cols=196 Identities=36% Similarity=0.656 Sum_probs=182.7
Q ss_pred EEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 136 IGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 136 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
++++.++++||++||.++....+++++||+.+++|++++++|.+|..|+++.++++||++||.......+++++||+.++
T Consensus 55 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~ 134 (302)
T 2xn4_A 55 AGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSN 134 (302)
T ss_dssp CEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTT
T ss_pred ceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCC
Confidence 47888999999999998777788999999999999999999999999999999999999999887777889999999999
Q ss_pred cEEecCCCCCCCcceEEEEECCEEEEEcccCCC--ccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccC
Q psy11771 216 KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGT--MCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGND 293 (347)
Q Consensus 216 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~--~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~ 293 (347)
+|+.++++|.+|..+++++++++||++||.+.. ...+++++||+.+++|+.++++|.+|..|++++++++||++||.+
T Consensus 135 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~ 214 (302)
T 2xn4_A 135 EWFHVAPMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVLNNLLYAVGGHD 214 (302)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECCBS
T ss_pred eEeecCCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEECCEEEEECCCC
Confidence 999999999999999999999999999998654 347899999999999999999999999999999999999999988
Q ss_pred CCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 294 GSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
+....+++++||+++++|+.++++|.+|..|+++++++
T Consensus 215 ~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 252 (302)
T 2xn4_A 215 GPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAVNG 252 (302)
T ss_dssp SSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred CCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEECC
Confidence 76667899999999999999999999999999998764
No 9
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=1.6e-39 Score=291.10 Aligned_cols=196 Identities=27% Similarity=0.519 Sum_probs=182.2
Q ss_pred EEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcC-CCCccceEEEEeCC
Q psy11771 135 AIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFD-STNYQASVERLDPR 213 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~yd~~ 213 (347)
.+++++++++||++||.+ ...++++++||+.+++|++++++|.+|..|+++.++++||++||.+ .....+++++||+.
T Consensus 48 ~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~ 126 (306)
T 3ii7_A 48 DAACVFWDNVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTR 126 (306)
T ss_dssp SCEEEEETTEEEEECCBS-SSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETT
T ss_pred eeEEEEECCEEEEEeCCC-CCCcceEEEEeCCCCeEEECCCCCccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCC
Confidence 348888999999999988 6677899999999999999999999999999999999999999987 55668999999999
Q ss_pred CCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCcc----CCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEE
Q psy11771 214 MGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMC----MSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTM 289 (347)
Q Consensus 214 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~----~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~ 289 (347)
+++|+.++++|.+|..|+++.++++||++||.+.... .+++++||+++++|+.++++|.+|..|+++.++++||++
T Consensus 127 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~ 206 (306)
T 3ii7_A 127 TESWHTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFVKDKIFAV 206 (306)
T ss_dssp TTEEEEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEE
T ss_pred CCceEeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEECCEEEEE
Confidence 9999999999999999999999999999999866554 789999999999999999999999999999999999999
Q ss_pred eccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
||.+.....+++++||+++++|+.++++|.+|..++++++++
T Consensus 207 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 248 (306)
T 3ii7_A 207 GGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAVGS 248 (306)
T ss_dssp CCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEETT
T ss_pred eCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEECC
Confidence 998776667899999999999999999999999999999864
No 10
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.5e-40 Score=302.63 Aligned_cols=197 Identities=15% Similarity=0.194 Sum_probs=163.5
Q ss_pred EEEEEEECCEEEEEccc-C----CCCCCCeEEEEeCCCCcEEeCCCCC-CCccceEEEEECCEEEEEcCcCCC-------
Q psy11771 135 AIGTCSFDGLLYACGGY-D----GASCLSSMERYDPLTGVWSSCPAMT-TRRRYCRIAVVENCLYALGGFDST------- 201 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~-~----~~~~~~~~~~~d~~~~~W~~~~~~~-~~r~~~~~~~~~~~lyv~GG~~~~------- 201 (347)
.+++++++++|||+||. + ....++++++||+.+++|+++++++ .+|..++++.++++|||+||....
T Consensus 58 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 137 (357)
T 2uvk_A 58 QATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFE 137 (357)
T ss_dssp SCEEEEETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHH
T ss_pred cceEEEECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCccccc
Confidence 34889999999999998 3 2245788999999999999999988 899999999999999999997543
Q ss_pred ---------------------------CccceEEEEeCCCCcEEecCCCCCCCcc-eEEEEECCEEEEEcccCCC-ccCC
Q psy11771 202 ---------------------------NYQASVERLDPRMGKWAPVPSMSSRRSS-CGVAALDGAIYCVGGNDGT-MCMS 252 (347)
Q Consensus 202 ---------------------------~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~-~~~~ 252 (347)
...+++++||+.+++|+.++++|.+|.. +++++++++||++||.+.. ...+
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~ 217 (357)
T 2uvk_A 138 DLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTD 217 (357)
T ss_dssp HHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECC
T ss_pred chhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccC
Confidence 1358999999999999999999977665 9999999999999997543 3467
Q ss_pred eEEEEEC--CCCeEEEcCCCCCC--CcceEEEEECCEEEEEeccCC-----------------CCCccEEEEEeCCCCcE
Q psy11771 253 SGERFNV--RRNSWEPIAPMLSR--RSTHEVVNIEGYLLTMGGNDG-----------------SSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 253 ~v~~yd~--~~~~W~~~~~~~~~--~~~~~~~~~~~~lyv~GG~~~-----------------~~~~~~v~~yd~~~~~W 311 (347)
++++||+ ++++|+.+++++.+ |..|++++++++|||+||.+. .....++++||+++++|
T Consensus 218 ~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W 297 (357)
T 2uvk_A 218 AVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKW 297 (357)
T ss_dssp CEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---C
T ss_pred ceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCce
Confidence 8999986 99999999988766 457789999999999999642 12236799999999999
Q ss_pred EEccCCCCCcceeEEEEEcC
Q psy11771 312 QLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 312 ~~~~~~~~~r~~~~~~~~~~ 331 (347)
+.++++|.+|.+|+++++++
T Consensus 298 ~~~~~~p~~r~~~~~~~~~~ 317 (357)
T 2uvk_A 298 DKSGELSQGRAYGVSLPWNN 317 (357)
T ss_dssp EEEEECSSCCBSSEEEEETT
T ss_pred eeCCCCCCCcccceeEEeCC
Confidence 99999999999999988764
No 11
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-39 Score=289.93 Aligned_cols=197 Identities=34% Similarity=0.652 Sum_probs=184.9
Q ss_pred EEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCc---EEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEe
Q psy11771 135 AIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGV---WSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLD 211 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd 211 (347)
.++++..+++||++||.++....+++++||+.+++ |++++++|.+|..++++.++++||++||.......+++++||
T Consensus 55 ~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d 134 (301)
T 2vpj_A 55 YVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYD 134 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEE
T ss_pred cccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEc
Confidence 34888899999999999877778899999999999 999999999999999999999999999998776788999999
Q ss_pred CCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy11771 212 PRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 212 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
+.+++|+.++++|.+|..+++++++++||++||.+.....+++++||+.+++|+.++++|.+|..|+++.++++||++||
T Consensus 135 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG 214 (301)
T 2vpj_A 135 PNIDQWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALLNDHIYVVGG 214 (301)
T ss_dssp TTTTEEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEECC
T ss_pred CCCCeEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEECCEEEEEeC
Confidence 99999999999999999999999999999999998777789999999999999999999999999999999999999999
Q ss_pred cCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 292 NDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
.++....+++++||+++++|+.++.+|.+|..|+++++++
T Consensus 215 ~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 254 (301)
T 2vpj_A 215 FDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVLRG 254 (301)
T ss_dssp BCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred CCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEECC
Confidence 8876667899999999999999999999999999998864
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=2.3e-38 Score=284.80 Aligned_cols=197 Identities=20% Similarity=0.351 Sum_probs=179.5
Q ss_pred EEEEEEECCEEEEEcccC----C--CCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcC---CCCccc
Q psy11771 135 AIGTCSFDGLLYACGGYD----G--ASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFD---STNYQA 205 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~----~--~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~---~~~~~~ 205 (347)
.+++++.+++||++||.. . ....+++++||+.+++|++++++|.+|..|+++.++++||++||.. +....+
T Consensus 38 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 117 (315)
T 4asc_A 38 HVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEALNSIYVVGGREIKDGERCLD 117 (315)
T ss_dssp EEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEETTEEEEECCEESSTTCCBCC
T ss_pred ceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEECCEEEEEeCCcCCCCCcccc
Confidence 568889999999999962 1 1223459999999999999999999999999999999999999974 245678
Q ss_pred eEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEccc-CCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECC
Q psy11771 206 SVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGN-DGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEG 284 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~ 284 (347)
++++||+.+++|+.++++|.+|..|+++.++++||++||. ......+++++||+.+++|+.++++|.+|..|+++++++
T Consensus 118 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 197 (315)
T 4asc_A 118 SVMCYDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVHDG 197 (315)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEETT
T ss_pred eEEEECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEECC
Confidence 9999999999999999999999999999999999999998 555678999999999999999999999999999999999
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
+||++||.++....+++++||+++++|+.++++|.+|..|+++++++
T Consensus 198 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 244 (315)
T 4asc_A 198 RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSLVG 244 (315)
T ss_dssp EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEETT
T ss_pred EEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEECC
Confidence 99999998877778899999999999999999999999999998865
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=3.9e-38 Score=283.65 Aligned_cols=197 Identities=26% Similarity=0.465 Sum_probs=177.2
Q ss_pred EEEEEEECCEEEEEcccC--CC----CCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcC--CCCccce
Q psy11771 135 AIGTCSFDGLLYACGGYD--GA----SCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFD--STNYQAS 206 (347)
Q Consensus 135 ~~~~~~~~~~lyv~GG~~--~~----~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~--~~~~~~~ 206 (347)
.++++..+++||++||.. .. ...+++++||+.+++|++++++|.+|..|+++.++++||++||.. .....++
T Consensus 49 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 128 (318)
T 2woz_A 49 HSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDS 128 (318)
T ss_dssp EEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEE
T ss_pred ceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEECCEEEEEcCccCCCCcccce
Confidence 458889999999999963 11 122359999999999999999999999999999999999999986 3456789
Q ss_pred EEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccC-CCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCE
Q psy11771 207 VERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGND-GTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGY 285 (347)
Q Consensus 207 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ 285 (347)
+++||+.+++|+.++++|.+|..|++++++++||++||.+ .....+++++||+.+++|+.++++|.+|..|++++++++
T Consensus 129 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~ 208 (318)
T 2woz_A 129 VLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIHKGK 208 (318)
T ss_dssp EEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEETTE
T ss_pred EEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEECCE
Confidence 9999999999999999999999999999999999999984 345678999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 286 LLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 286 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
||++||.++....+++++||+++++|+.++++|.+|..|+++++++
T Consensus 209 iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~ 254 (318)
T 2woz_A 209 IVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSLAG 254 (318)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEETT
T ss_pred EEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEECC
Confidence 9999998776667899999999999999999999999999998875
No 14
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2.8e-36 Score=275.73 Aligned_cols=248 Identities=17% Similarity=0.153 Sum_probs=184.0
Q ss_pred CCccce-eeecccccccccceEEEecCeeEEEEEeeeCCCCCCCccCChHHHHHHHHHHHHhccccccccccCCCChHHH
Q psy11771 2 PIAPML-YRRSRSGVAGLGKMLYVVGGFYCQLLVFYKYPLYGRPAVNSSCGNYILPTAWVSVALQLLRHVKLPLLARDFL 80 (347)
Q Consensus 2 ~~~~~~-~~r~~h~~~~~~~~~y~~GG~~~~~~~~~~~~l~~~~~v~~E~~v~~~~~~Wv~~~~~ll~~vr~~~l~~~~l 80 (347)
++++|| .+|.+|++++++++|||+||.... .+.. .
T Consensus 47 ~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~----------~~~~--~-------------------------------- 82 (357)
T 2uvk_A 47 ALAAFPGGPRDQATSAFIDGNLYVFGGIGKN----------SEGL--T-------------------------------- 82 (357)
T ss_dssp ECCCCTTCCCBSCEEEEETTEEEEECCEEEC----------TTSC--E--------------------------------
T ss_pred ECCCCCCCcCccceEEEECCEEEEEcCCCCC----------CCcc--c--------------------------------
Confidence 468999 899999999999999999998210 0000 0
Q ss_pred HHhcccccccccChhHHHHHHHHHHhccCcccccccccCccccccCCCCCCeEEEEEEEEECCEEEEEcccCCC------
Q psy11771 81 MNSVESESLIKESTECQELLLEAMKYHLLPEQRSLLTTKRTQERKPEGMLPYVFAIGTCSFDGLLYACGGYDGA------ 154 (347)
Q Consensus 81 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~------ 154 (347)
..+.+++.|+..+..|..++...+.+|. .+++++.+++||++||.+..
T Consensus 83 -----------------~~~~~v~~yd~~~~~W~~~~~~~p~~r~---------~~~~~~~~~~iyv~GG~~~~~~~~~~ 136 (357)
T 2uvk_A 83 -----------------QVFNDVHKYNPKTNSWVKLMSHAPMGMA---------GHVTFVHNGKAYVTGGVNQNIFNGYF 136 (357)
T ss_dssp -----------------EECCCEEEEETTTTEEEECSCCCSSCCS---------SEEEEEETTEEEEEECCCHHHHHHHH
T ss_pred -----------------eeeccEEEEeCCCCcEEECCCCCCcccc---------cceEEEECCEEEEEeCcCCCcCcccc
Confidence 0001123344444455554433223333 44777899999999998643
Q ss_pred ----------------------------CCCCeEEEEeCCCCcEEeCCCCCCCcc-ceEEEEECCEEEEEcCcCCC-Ccc
Q psy11771 155 ----------------------------SCLSSMERYDPLTGVWSSCPAMTTRRR-YCRIAVVENCLYALGGFDST-NYQ 204 (347)
Q Consensus 155 ----------------------------~~~~~~~~~d~~~~~W~~~~~~~~~r~-~~~~~~~~~~lyv~GG~~~~-~~~ 204 (347)
..++++++||+.+++|+.++++|.+|. .++++.++++|||+||.... ...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~ 216 (357)
T 2uvk_A 137 EDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRT 216 (357)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEEC
T ss_pred cchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCccc
Confidence 245889999999999999999997654 49999999999999997644 246
Q ss_pred ceEEEEeC--CCCcEEecCCCCCC--CcceEEEEECCEEEEEcccCCC-----------------ccCCeEEEEECCCCe
Q psy11771 205 ASVERLDP--RMGKWAPVPSMSSR--RSSCGVAALDGAIYCVGGNDGT-----------------MCMSSGERFNVRRNS 263 (347)
Q Consensus 205 ~~~~~yd~--~~~~W~~~~~~p~~--r~~~~~~~~~~~iyv~GG~~~~-----------------~~~~~v~~yd~~~~~ 263 (347)
+++++||+ .+++|+.++++|.+ |..+++++++++||++||.+.. ....++++||+++++
T Consensus 217 ~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 217 DAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp CCEEEEECC---CEEEECCCSSTTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred CceEEEEecCCCCcEEecCCCCCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 78999976 89999999988765 4577899999999999996432 223579999999999
Q ss_pred EEEcCCCCCCCcceEEEEECCEEEEEeccCCCC-CccEEEEEeCCCCcEEEccCCCC
Q psy11771 264 WEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSS-SLNSVEKYDPKLNKWQLLTPMLT 319 (347)
Q Consensus 264 W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~-~~~~v~~yd~~~~~W~~~~~~~~ 319 (347)
|+.++++|.+|..|+++.++++|||+||.+... ..++++.|+.++++|.+..+.|.
T Consensus 297 W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~~~ 353 (357)
T 2uvk_A 297 WDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLEHH 353 (357)
T ss_dssp CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC----
T ss_pred eeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecccc
Confidence 999999999999999999999999999987543 46899999999999999877654
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.1e-34 Score=286.32 Aligned_cols=203 Identities=15% Similarity=0.124 Sum_probs=170.6
Q ss_pred EEEEEEEE--CCEEEEEcccCCCC-CCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEE
Q psy11771 134 FAIGTCSF--DGLLYACGGYDGAS-CLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 134 ~~~~~~~~--~~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~ 209 (347)
..|+++++ +++|||+||.+... .++++++||+.+++|+.++++|.+|..|+++.+ +++|||+||..... ++++
T Consensus 441 ~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~ 517 (695)
T 2zwa_A 441 MCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLL 517 (695)
T ss_dssp BSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEE
T ss_pred cceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEE
Confidence 34589999 99999999997544 678999999999999999999999999999997 99999999987654 8999
Q ss_pred EeCCCCcEEecCC---CCCCCcceEEEEEC---CEEEEEcccCCC--ccCCeEEEEECCCCe------EEEcCCC-CCCC
Q psy11771 210 LDPRMGKWAPVPS---MSSRRSSCGVAALD---GAIYCVGGNDGT--MCMSSGERFNVRRNS------WEPIAPM-LSRR 274 (347)
Q Consensus 210 yd~~~~~W~~~~~---~p~~r~~~~~~~~~---~~iyv~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-~~~~ 274 (347)
||+.+++|+.+++ +|.+|..|++++++ ++||++||.+.. ...+++++||+.+++ |+.+.++ +.+|
T Consensus 518 yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R 597 (695)
T 2zwa_A 518 YNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQR 597 (695)
T ss_dssp EETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCC
T ss_pred EECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCc
Confidence 9999999999986 89999999988877 899999998543 567899999999999 9999886 5899
Q ss_pred cceEEEEEC-CEEEEEeccCCCC---CccEEEEEeCCCCcEEEccCCCC--------CcceeEEEEEcCCCcceEEEEcC
Q psy11771 275 STHEVVNIE-GYLLTMGGNDGSS---SLNSVEKYDPKLNKWQLLTPMLT--------RRSSIGAAVLETLNIEKRLLVAP 342 (347)
Q Consensus 275 ~~~~~~~~~-~~lyv~GG~~~~~---~~~~v~~yd~~~~~W~~~~~~~~--------~r~~~~~~~~~~~~~~~~~~~~~ 342 (347)
.+|++++++ ++|||+||.+... ..+++++||+.+++|+.++ +|. .+.+|+++++++. ++++.+
T Consensus 598 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~~~~-~p~~~~~~~~p~~~gh~~~~~~~g----~i~v~G 672 (695)
T 2zwa_A 598 YGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLTSIP-ISRRIWEDHSLMLAGFSLVSTSMG----TIHIIG 672 (695)
T ss_dssp BSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEEECC-CCHHHHHHSCCCCSSCEEECC-------CEEEEC
T ss_pred ccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEEEee-ccccccCCCCccceeeeEEEeCCC----EEEEEe
Confidence 999999998 9999999986543 4788999999999999653 322 3567888776643 566665
Q ss_pred CC
Q psy11771 343 PA 344 (347)
Q Consensus 343 ~~ 344 (347)
|.
T Consensus 673 Gg 674 (695)
T 2zwa_A 673 GG 674 (695)
T ss_dssp CE
T ss_pred CC
Confidence 53
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=1.4e-34 Score=285.56 Aligned_cols=265 Identities=12% Similarity=0.129 Sum_probs=209.3
Q ss_pred HHHhc--------cccccccccCCCChHHHHHhcccccccccCh---hHHHHHHHHHHhccCcccccccccCccccccCC
Q psy11771 59 WVSVA--------LQLLRHVKLPLLARDFLMNSVESESLIKEST---ECQELLLEAMKYHLLPEQRSLLTTKRTQERKPE 127 (347)
Q Consensus 59 Wv~~~--------~~ll~~vr~~~l~~~~l~~~l~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 127 (347)
|+.++ +.+.+.++|+++.+.|+.....++..+...+ .|..+... .... .............+|+..
T Consensus 315 ~~~~~e~~R~~~lE~ldE~e~~~l~~~hY~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~p~rr~g 391 (695)
T 2zwa_A 315 SADEATKKELLKVEPFDELEEFHLFCHHYVLCHATNYKEFAFTQGFLFDRSISEI--NLTV-DEDYQLLECECPINRKFG 391 (695)
T ss_dssp HSCHHHHHHHHHHSCCCCHHHHHHHHHTEEEEEEESCTTCCCCTTTCCCC----C--CCEE-CSSEEEEECCCTTCCBSC
T ss_pred hCCHHHHHHHHhccccchHHHHHHhhccEEEEEEecCCccccCcccCCCCccccc--cCCC-CCceeEeccCCCCCCcee
Confidence 77766 7888999999999999988888888777665 44332210 0000 000000001112222222
Q ss_pred CCCCeEEEEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC-C-----CCCCccceEEEEE--CCEEEEEcCcC
Q psy11771 128 GMLPYVFAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCP-A-----MTTRRRYCRIAVV--ENCLYALGGFD 199 (347)
Q Consensus 128 ~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~-----~~~~r~~~~~~~~--~~~lyv~GG~~ 199 (347)
++++++++||++||.+. ..++++++||+.+++|+.++ + +|.+|..|+++.+ +++|||+||..
T Consensus 392 ---------~~~~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~ 461 (695)
T 2zwa_A 392 ---------DVDVAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRK 461 (695)
T ss_dssp ---------EEEECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBS
T ss_pred ---------EEEEECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCC
Confidence 44558999999999977 77789999999999999887 5 7899999999999 99999999987
Q ss_pred CCC-ccceEEEEeCCCCcEEecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCC---CCCCC
Q psy11771 200 STN-YQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAP---MLSRR 274 (347)
Q Consensus 200 ~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~---~~~~~ 274 (347)
... ..+++++||+.+++|+.++++|.+|..|+++++ +++||++||.+... ++++||+.+++|+.+++ +|.+|
T Consensus 462 ~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~~g~~p~~r 538 (695)
T 2zwa_A 462 APHQGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTPKDEFFQNS 538 (695)
T ss_dssp STTCBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCCSSGGGGSC
T ss_pred CCCCccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccCCCCCCCcc
Confidence 654 678999999999999999999999999999997 99999999987655 89999999999999986 89999
Q ss_pred cceEEEEEC---CEEEEEeccCCC--CCccEEEEEeCCCCc------EEEccCC-CCCcceeEEEEEcCCCcceEEEEcC
Q psy11771 275 STHEVVNIE---GYLLTMGGNDGS--SSLNSVEKYDPKLNK------WQLLTPM-LTRRSSIGAAVLETLNIEKRLLVAP 342 (347)
Q Consensus 275 ~~~~~~~~~---~~lyv~GG~~~~--~~~~~v~~yd~~~~~------W~~~~~~-~~~r~~~~~~~~~~~~~~~~~~~~~ 342 (347)
..|++++++ ++||++||.... ...+++++||+.+++ |+.+..+ +.+|.+|+++++++ ..+++.+
T Consensus 539 ~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~----~~iyv~G 614 (695)
T 2zwa_A 539 LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYITP----RKLLIVG 614 (695)
T ss_dssp CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEEET----TEEEEEC
T ss_pred cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEeCC----CEEEEEC
Confidence 999988876 899999998543 557899999999999 9999886 58999999999883 3455554
Q ss_pred C
Q psy11771 343 P 343 (347)
Q Consensus 343 ~ 343 (347)
|
T Consensus 615 G 615 (695)
T 2zwa_A 615 G 615 (695)
T ss_dssp C
T ss_pred C
Confidence 4
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.97 E-value=1.1e-30 Score=257.19 Aligned_cols=188 Identities=20% Similarity=0.322 Sum_probs=156.3
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCc-CCCCccceEEEEeCCCC
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGF-DSTNYQASVERLDPRMG 215 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~-~~~~~~~~~~~yd~~~~ 215 (347)
++..+++||++||.+. .++++||+.+++|+++++|+.+|..|+++.+ +++|||+||. ++....+++++||+.++
T Consensus 249 ~~~~~g~lyv~GG~~~----~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EECTTSCEEEECSSST----TCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred cCCCCCCEEEeCCCCC----CceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCC
Confidence 3346899999999764 3799999999999999999999999999999 9999999994 54456789999999999
Q ss_pred cEEecC-----CCCCCC---------------------------------------------------------cceEEE
Q psy11771 216 KWAPVP-----SMSSRR---------------------------------------------------------SSCGVA 233 (347)
Q Consensus 216 ~W~~~~-----~~p~~r---------------------------------------------------------~~~~~~ 233 (347)
+|+.++ +++..+ ..++++
T Consensus 325 ~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av 404 (656)
T 1k3i_A 325 TWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAV 404 (656)
T ss_dssp EEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEE
T ss_pred cceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceE
Confidence 999973 333321 123333
Q ss_pred E---ECCEEEEEcccCC---CccCC---eEEEEECCCCeEEEcC--CCCCCCcceEEEEE-CCEEEEEeccCC------C
Q psy11771 234 A---LDGAIYCVGGNDG---TMCMS---SGERFNVRRNSWEPIA--PMLSRRSTHEVVNI-EGYLLTMGGNDG------S 295 (347)
Q Consensus 234 ~---~~~~iyv~GG~~~---~~~~~---~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~-~~~lyv~GG~~~------~ 295 (347)
. .+++||++||... ....+ ++++||+.+++|..+. +||.+|..|+++++ +++||++||.+. .
T Consensus 405 ~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~ 484 (656)
T 1k3i_A 405 MYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDS 484 (656)
T ss_dssp EEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCC
T ss_pred eccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCC
Confidence 3 4899999999642 23344 7899999999999987 99999999999998 999999999652 2
Q ss_pred CCccEEEEEeCCCCcEEEccCCCCCcceeEEEEE
Q psy11771 296 SSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVL 329 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~ 329 (347)
....++++|||++++|+.+++++.+|.+|+++++
T Consensus 485 ~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~l 518 (656)
T 1k3i_A 485 TPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLL 518 (656)
T ss_dssp SBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEE
T ss_pred CcccceEEEcCCCCceeecCCCCCccccccHhhc
Confidence 4467899999999999999999999999998877
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.93 E-value=1.5e-25 Score=220.65 Aligned_cols=189 Identities=22% Similarity=0.386 Sum_probs=151.4
Q ss_pred EEEEE--CCEEEEEcccCCCC------CCCeEEEEeCCCCcEEeCCCCCCCccceE--EE-EECCEEEEEcCcCCCCccc
Q psy11771 137 GTCSF--DGLLYACGGYDGAS------CLSSMERYDPLTGVWSSCPAMTTRRRYCR--IA-VVENCLYALGGFDSTNYQA 205 (347)
Q Consensus 137 ~~~~~--~~~lyv~GG~~~~~------~~~~~~~~d~~~~~W~~~~~~~~~r~~~~--~~-~~~~~lyv~GG~~~~~~~~ 205 (347)
++++. +++||++||.+... ....+++||+.+++|++++.++.+|..++ ++ ..+++||++||... .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~----~ 265 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----K 265 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST----T
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC----C
Confidence 44545 99999999985432 23468999999999999988887776554 33 35899999999754 3
Q ss_pred eEEEEeCCCCcEEecCCCCCCCcceEEEEE-CCEEEEEcc-cCCCccCCeEEEEECCCCeEEEcC-----CCCCC-----
Q psy11771 206 SVERLDPRMGKWAPVPSMSSRRSSCGVAAL-DGAIYCVGG-NDGTMCMSSGERFNVRRNSWEPIA-----PMLSR----- 273 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~-----~~~~~----- 273 (347)
++++||+.+++|+.+++||.+|..|+++++ +++||++|| .++....+++++||+.+++|+.++ +++..
T Consensus 266 ~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~ 345 (656)
T 1k3i_A 266 KTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGL 345 (656)
T ss_dssp CEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGG
T ss_pred ceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccce
Confidence 799999999999999999999999999999 999999999 455567789999999999999973 33322
Q ss_pred ----------------------------------------------------CcceEEEE---ECCEEEEEeccCC---C
Q psy11771 274 ----------------------------------------------------RSTHEVVN---IEGYLLTMGGNDG---S 295 (347)
Q Consensus 274 ----------------------------------------------------~~~~~~~~---~~~~lyv~GG~~~---~ 295 (347)
+..++++. .+++||++||.+. .
T Consensus 346 ~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~ 425 (656)
T 1k3i_A 346 YRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDS 425 (656)
T ss_dssp GTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSS
T ss_pred eecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCC
Confidence 11233443 4899999999642 2
Q ss_pred CCcc---EEEEEeCCCCcEEEcc--CCCCCcceeEEEEE
Q psy11771 296 SSLN---SVEKYDPKLNKWQLLT--PMLTRRSSIGAAVL 329 (347)
Q Consensus 296 ~~~~---~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~~ 329 (347)
...+ .+++||+.+++|..+. .||.+|..|+++++
T Consensus 426 ~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l 464 (656)
T 1k3i_A 426 DATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVL 464 (656)
T ss_dssp BCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEEC
T ss_pred CcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEEC
Confidence 2334 7999999999999987 89999999999888
No 19
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=98.80 E-value=2.6e-09 Score=93.49 Aligned_cols=68 Identities=22% Similarity=0.384 Sum_probs=63.7
Q ss_pred CCccCChHHHHHHHHHHHHhc--------cccccccccCCCChHHHHHhcccccccccChhHHHHHHHHHHhccCc
Q psy11771 43 RPAVNSSCGNYILPTAWVSVA--------LQLLRHVKLPLLARDFLMNSVESESLIKESTECQELLLEAMKYHLLP 110 (347)
Q Consensus 43 ~~~v~~E~~v~~~~~~Wv~~~--------~~ll~~vr~~~l~~~~l~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~ 110 (347)
+++|.+|++||+++++|++|+ ++|+++|||+++++.+|.+.+++++++..++.|++++.++++||..+
T Consensus 196 ~L~v~sE~~vf~av~~W~~~~~~~r~~~~~~ll~~VRf~l~~~~~L~~~v~~~~l~~~~~~c~~~l~ea~~~~~~~ 271 (279)
T 3i3n_A 196 EITVDSEEVLFETVLKWVQRNAEERERYFEELFKLLRLSQMKPTYLTRHVKPERLVANNEVCVKLVADAVERHALR 271 (279)
T ss_dssp SCCCSCHHHHHHHHHHHHHTTHHHHTTTHHHHHTTSCGGGSCHHHHHHTTTTSHHHHTCHHHHHHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCCCHHHHHHHhhccchhcCCHHHHHHHHHHHHhccCc
Confidence 345899999999999999998 78999999999999999999999999999999999999999999754
No 20
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=98.22 E-value=2.7e-08 Score=85.86 Aligned_cols=60 Identities=17% Similarity=0.319 Sum_probs=42.9
Q ss_pred CCCccCChHHHHHHHHHHHHhc--------cccccccccCCCChHHHHHhcccccccccC-hhHHHHHH
Q psy11771 42 GRPAVNSSCGNYILPTAWVSVA--------LQLLRHVKLPLLARDFLMNSVESESLIKES-TECQELLL 101 (347)
Q Consensus 42 ~~~~v~~E~~v~~~~~~Wv~~~--------~~ll~~vr~~~l~~~~l~~~l~~~~l~~~~-~~~~~~~~ 101 (347)
++++|.+|++||+++++|++|+ ++|+++|||+++++.+|.+.+++++++..+ ++|++++.
T Consensus 187 d~L~v~~E~~v~~av~~W~~~~~~~R~~~~~~ll~~VRf~~l~~~~l~~~v~~~~l~~~~~~~c~~ll~ 255 (256)
T 3hve_A 187 EKLNVGNERYVFEAVIRWIAHDTEIRKVHMKDVMSALWVSGLDSSYLREQMLNEPLVREIVKECSNIPL 255 (256)
T ss_dssp C-------CTTHHHHTTTCCC--CCSTTTHHHHHHHHHHHTTCC-CHHHHHHTSTTHHHHHCC------
T ss_pred CCCCCCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHhCCCCCCCHHHHHHHHhcChHHHhhHHHHHHHhh
Confidence 3445889999999999999999 789999999999999999999999999998 78988765
No 21
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.07 E-value=0.00059 Score=57.58 Aligned_cols=162 Identities=18% Similarity=0.120 Sum_probs=109.7
Q ss_pred EEEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 134 FAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 134 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
+..++...++.||+-.|..+. +.+.++|+.+++-..--+++..-...+++..+++||+.... .+.+++||+.
T Consensus 22 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~-----~~~v~v~D~~ 93 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWR-----NHEGFVYDLA 93 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETT
T ss_pred ccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEee-----CCEEEEEECC
Confidence 355788889999999997653 67899999999876555666666677788889999998643 3789999998
Q ss_pred CCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-c--CCCCCCCcc-eEEEEECCEEEEE
Q psy11771 214 MGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-I--APMLSRRST-HEVVNIEGYLLTM 289 (347)
Q Consensus 214 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~--~~~~~~~~~-~~~~~~~~~lyv~ 289 (347)
+.+-. ..++.+....+++.-+++||+.-|. +.++.+|+++.+-.. + ...+.+... -.+...+++||+-
T Consensus 94 tl~~~--~ti~~~~~Gwglt~dg~~L~vSdgs------~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyan 165 (243)
T 3mbr_X 94 TLTPR--ARFRYPGEGWALTSDDSHLYMSDGT------AVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLAN 165 (243)
T ss_dssp TTEEE--EEEECSSCCCEEEECSSCEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEE--EEEeCCCCceEEeeCCCEEEEECCC------CeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEE
Confidence 76533 2223233445666667789987652 689999999875432 2 112222221 2344558999964
Q ss_pred eccCCCCCccEEEEEeCCCCc---EEEccC
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNK---WQLLTP 316 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~---W~~~~~ 316 (347)
--. .++|.+.||++.+ |-.++.
T Consensus 166 vw~-----s~~I~vIDp~tG~V~~~idl~~ 190 (243)
T 3mbr_X 166 VWL-----TSRIARIDPASGKVVAWIDLQA 190 (243)
T ss_dssp ETT-----TTEEEEECTTTCBEEEEEECGG
T ss_pred ECC-----CCeEEEEECCCCCEEEEEECCc
Confidence 321 3589999999886 444444
No 22
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.86 E-value=0.00049 Score=58.06 Aligned_cols=116 Identities=14% Similarity=0.128 Sum_probs=86.7
Q ss_pred ccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEEC
Q psy11771 180 RRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNV 259 (347)
Q Consensus 180 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~ 259 (347)
-+..++...++.+|+..|..+. +.+..+|+.+.+-...-+++......+++..+++||+....+ +.+++||+
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~-----~~v~v~D~ 92 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRN-----HEGFVYDL 92 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEET
T ss_pred cccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeC-----CEEEEEEC
Confidence 3445777889999999886543 678999999998766667777667778888999999986443 78999999
Q ss_pred CCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 260 RRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 260 ~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
++.+- +..++.+..+.+++.-+++||+.-| .+.+..+||++.+=
T Consensus 93 ~tl~~--~~ti~~~~~Gwglt~dg~~L~vSdg------s~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 93 ATLTP--RARFRYPGEGWALTSDDSHLYMSDG------TAVIRKLDPDTLQQ 136 (243)
T ss_dssp TTTEE--EEEEECSSCCCEEEECSSCEEEECS------SSEEEEECTTTCCE
T ss_pred CcCcE--EEEEeCCCCceEEeeCCCEEEEECC------CCeEEEEeCCCCeE
Confidence 88653 3333334456677766788999766 35799999998654
No 23
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.85 E-value=0.00075 Score=57.49 Aligned_cols=157 Identities=15% Similarity=0.077 Sum_probs=102.1
Q ss_pred EEEEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 134 FAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 134 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
+..++...++.||+..|..+. +.+.++|+.+.+-..--+++..-+..+++..+++||+.... .+.+++||+.
T Consensus 44 ftqGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~-----~~~v~v~D~~ 115 (262)
T 3nol_A 44 FTEGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWK-----NGLGFVWNIR 115 (262)
T ss_dssp EEEEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESS-----SSEEEEEETT
T ss_pred ccceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEee-----CCEEEEEECc
Confidence 344777779999999997542 56899999999865444455544556678889999999653 3789999998
Q ss_pred CCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCC---CCCCcce-EEEEECCEEEEE
Q psy11771 214 MGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPM---LSRRSTH-EVVNIEGYLLTM 289 (347)
Q Consensus 214 ~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---~~~~~~~-~~~~~~~~lyv~ 289 (347)
+.+-.. .++.+-...+++.-++.+|+.-| .+.++.+|+++.+-..--+. ..+.... .+...+++||+-
T Consensus 116 t~~~~~--ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan 187 (262)
T 3nol_A 116 NLRQVR--SFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFAN 187 (262)
T ss_dssp TCCEEE--EEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEE
T ss_pred cCcEEE--EEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEE
Confidence 765432 22222234455555677888655 26899999998754322111 1111111 244458999963
Q ss_pred eccCCCCCccEEEEEeCCCCcE
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~W 311 (347)
- + ..++|.+.||++.+=
T Consensus 188 ~-w----~~~~I~vIDp~tG~V 204 (262)
T 3nol_A 188 V-W----QTNKIVRIDPETGKV 204 (262)
T ss_dssp E-T----TSSEEEEECTTTCBE
T ss_pred E-c----cCCeEEEEECCCCcE
Confidence 3 2 146899999998863
No 24
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.66 E-value=0.0018 Score=55.22 Aligned_cols=151 Identities=11% Similarity=0.007 Sum_probs=99.5
Q ss_pred EEEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 136 IGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 136 ~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
.++...++.||+..|..+ .+.++|+.+.+-..-- ++..-+..+++..+++||+.... .+.+++||+.+.
T Consensus 58 qGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~-----~~~v~V~D~~Tl 126 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWT-----EGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESS-----SCEEEEEETTTT
T ss_pred ceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEcc-----CCEEEEEECCcC
Confidence 477777999999999654 3889999998753322 55444555677889999998653 378999999876
Q ss_pred cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-cC--CCCCCCcc-eEEEEECCEEEEEec
Q psy11771 216 KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IA--PMLSRRST-HEVVNIEGYLLTMGG 291 (347)
Q Consensus 216 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~~~~~~~-~~~~~~~~~lyv~GG 291 (347)
+-.. .++.+....+++.-+++||+.-|. +.++.+|+++.+-.. +. .-+.+... -.+...+++||+--
T Consensus 127 ~~~~--ti~~~~eGwGLt~Dg~~L~vSdGs------~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanv- 197 (268)
T 3nok_A 127 QRER--TTRYSGEGWGLCYWNGKLVRSDGG------TMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANI- 197 (268)
T ss_dssp EEEE--EEECSSCCCCEEEETTEEEEECSS------SEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE-
T ss_pred cEEE--EEeCCCceeEEecCCCEEEEECCC------CEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEE-
Confidence 5432 222222345666668889998652 689999999875432 21 11212111 12344589999632
Q ss_pred cCCCCCccEEEEEeCCCCc
Q psy11771 292 NDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~ 310 (347)
+. .++|.+.||++.+
T Consensus 198 w~----s~~I~vIDp~TG~ 212 (268)
T 3nok_A 198 WH----SSDVLEIDPATGT 212 (268)
T ss_dssp TT----CSEEEEECTTTCB
T ss_pred CC----CCeEEEEeCCCCc
Confidence 21 3589999999886
No 25
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.58 E-value=0.025 Score=49.84 Aligned_cols=158 Identities=8% Similarity=-0.050 Sum_probs=95.9
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcE-EeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTGVW-SSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
.++..++++|+.... .+.+.++|+.+.+- ..++.. .....++. .++++|+.... ...+.++|+.+
T Consensus 48 ~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~~---~~p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t 114 (328)
T 3dsm_A 48 SMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITGF---TSPRYIHFLSDEKAYVTQIW-----DYRIFIINPKT 114 (328)
T ss_dssp EEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEECC---SSEEEEEEEETTEEEEEEBS-----CSEEEEEETTT
T ss_pred EEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCCC---CCCcEEEEeCCCeEEEEECC-----CCeEEEEECCC
Confidence 455679999999753 25799999998775 334322 22334444 68899998742 36799999998
Q ss_pred CcEEecCCCCC----CCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEE
Q psy11771 215 GKWAPVPSMSS----RRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTM 289 (347)
Q Consensus 215 ~~W~~~~~~p~----~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~ 289 (347)
.+-...-+... ......++..++++|+..-. ..+.+.++|+.+++....-+.. ..-+.++.- ++++|+.
T Consensus 115 ~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~----~~~~v~viD~~t~~~~~~i~~g--~~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 115 YEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS----YQNRILKIDTETDKVVDELTIG--IQPTSLVMDKYNKMWTI 188 (328)
T ss_dssp TEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT----TCCEEEEEETTTTEEEEEEECS--SCBCCCEECTTSEEEEE
T ss_pred CeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC----CCCEEEEEECCCCeEEEEEEcC--CCccceEEcCCCCEEEE
Confidence 87542211111 00223344478999998520 1268999999988764422211 111223333 6898887
Q ss_pred eccCCCC-----CccEEEEEeCCCCcEEE
Q psy11771 290 GGNDGSS-----SLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 290 GG~~~~~-----~~~~v~~yd~~~~~W~~ 313 (347)
....... ..+.++++|+++.+...
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~ 217 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEK 217 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEE
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEE
Confidence 6322111 12689999999987653
No 26
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.57 E-value=0.00063 Score=57.96 Aligned_cols=113 Identities=15% Similarity=0.178 Sum_probs=80.7
Q ss_pred eEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 183 CRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 183 ~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
.++...++.||+..|..+. +.+..+|+.+.+-...-+++......+++..+++||+....+ +.+++||+++.
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~-----~~v~v~D~~t~ 117 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN-----GLGFVWNIRNL 117 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS-----SEEEEEETTTC
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC-----CEEEEEECccC
Confidence 4566668999999885442 678999999988665555665555667888899999996543 68999999886
Q ss_pred eEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 263 SWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 263 ~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
+- +..++.+..+.+++.-+++||+.-| .+.++.+||++.+=
T Consensus 118 ~~--~~ti~~~~eG~glt~dg~~L~~SdG------s~~i~~iDp~T~~v 158 (262)
T 3nol_A 118 RQ--VRSFNYDGEGWGLTHNDQYLIMSDG------TPVLRFLDPESLTP 158 (262)
T ss_dssp CE--EEEEECSSCCCCEEECSSCEEECCS------SSEEEEECTTTCSE
T ss_pred cE--EEEEECCCCceEEecCCCEEEEECC------CCeEEEEcCCCCeE
Confidence 53 2333333355566655777888765 25799999998653
No 27
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.47 E-value=0.019 Score=50.65 Aligned_cols=152 Identities=10% Similarity=0.003 Sum_probs=91.2
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCC----CccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTT----RRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~----~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++++|+.... ...+.++|+.+.+....-+... ......++..++++||..- +..+.+.++|+.+++
T Consensus 93 ~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~----~~~~~v~viD~~t~~ 163 (328)
T 3dsm_A 93 SDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW----SYQNRILKIDTETDK 163 (328)
T ss_dssp ETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC----TTCCEEEEEETTTTE
T ss_pred CCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC----CCCCEEEEEECCCCe
Confidence 67899998742 2679999999887542111111 0022334447899999852 113679999999887
Q ss_pred EEecCCCCCCCcceEEEE-ECCEEEEEcccCCCcc-----CCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEE
Q psy11771 217 WAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMC-----MSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLT 288 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~-----~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv 288 (347)
....-+... .-..++. -++++|+......... ...++++|+.+.+....-.++....-..++.. ++.||+
T Consensus 164 ~~~~i~~g~--~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 164 VVDELTIGI--QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp EEEEEECSS--CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred EEEEEEcCC--CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 543221111 1122222 3688988864321111 36899999999876643334433333344444 567888
Q ss_pred EeccCCCCCccEEEEEeCCCCcE
Q psy11771 289 MGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 289 ~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
..+ .+++||+++.+.
T Consensus 242 ~~~--------~v~~~d~~t~~~ 256 (328)
T 3dsm_A 242 INN--------DIWRMPVEADRV 256 (328)
T ss_dssp ESS--------SEEEEETTCSSC
T ss_pred Ecc--------EEEEEECCCCce
Confidence 654 688999988765
No 28
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.45 E-value=0.023 Score=48.57 Aligned_cols=153 Identities=15% Similarity=0.071 Sum_probs=95.9
Q ss_pred EEEEEC-CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 137 GTCSFD-GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 137 ~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
++...+ +.||+..|..+ .+.+.++|+.+++-..--+++......+++..+++||+..-. .+.+++||+.+.
T Consensus 25 Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-----~~~v~viD~~t~ 96 (266)
T 2iwa_A 25 GLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWL-----KNIGFIYDRRTL 96 (266)
T ss_dssp EEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETT-----CSEEEEEETTTT
T ss_pred cEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEec-----CCEEEEEECCCC
Confidence 555555 89999987532 267999999998865433344444555677778999998642 377999999876
Q ss_pred cEEecCCCCCC-CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-cC--CCCCCCc-ceEEEEECCEEEEEe
Q psy11771 216 KWAPVPSMSSR-RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IA--PMLSRRS-THEVVNIEGYLLTMG 290 (347)
Q Consensus 216 ~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~--~~~~~~~-~~~~~~~~~~lyv~G 290 (347)
+=. ..++.+ ....+++.-++++|+.-| .+.+..+|+++.+-.. +. ..+.+.. -..+...+++||+--
T Consensus 97 ~v~--~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~ 168 (266)
T 2iwa_A 97 SNI--KNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANI 168 (266)
T ss_dssp EEE--EEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEE
T ss_pred cEE--EEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEec
Confidence 432 222221 223444545678998754 3689999999865322 21 1111111 113334488999754
Q ss_pred ccCCCCCccEEEEEeCCCCc
Q psy11771 291 GNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 291 G~~~~~~~~~v~~yd~~~~~ 310 (347)
.. .++|.+.|+++.+
T Consensus 169 ~~-----~~~V~vID~~tg~ 183 (266)
T 2iwa_A 169 WQ-----TDCIARISAKDGT 183 (266)
T ss_dssp TT-----SSEEEEEETTTCC
T ss_pred CC-----CCeEEEEECCCCc
Confidence 32 3589999998875
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.27 E-value=0.039 Score=49.36 Aligned_cols=150 Identities=19% Similarity=0.219 Sum_probs=90.2
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCC-------CCccceEEEEECCEEEEEcCcCCCCccceEE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMT-------TRRRYCRIAVVENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~-------~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 208 (347)
-++.++.||+... ...+.+||..+.+ |+.-.... ........+..++.+|+... ...++
T Consensus 49 p~v~~~~v~~~~~------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------~g~l~ 116 (376)
T 3q7m_A 49 PALADNVVYAADR------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSE------KAQVY 116 (376)
T ss_dssp CEEETTEEEEECT------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEET------TSEEE
T ss_pred cEEECCEEEEEcC------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcC------CCEEE
Confidence 4556899998754 2468999997764 76432211 12233445567899998643 25799
Q ss_pred EEeCCCCc--EEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEcCCCCC--CCcceEEEEE
Q psy11771 209 RLDPRMGK--WAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPIAPMLS--RRSTHEVVNI 282 (347)
Q Consensus 209 ~yd~~~~~--W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~--~~~~~~~~~~ 282 (347)
++|..+.+ |+...+-. ...+.+..++.+|+..+. ..++.||+.+.+ |+.-...+. .+...+.+..
T Consensus 117 a~d~~tG~~~W~~~~~~~---~~~~p~~~~~~v~v~~~~------g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~ 187 (376)
T 3q7m_A 117 ALNTSDGTVAWQTKVAGE---ALSRPVVSDGLVLIHTSN------GQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA 187 (376)
T ss_dssp EEETTTCCEEEEEECSSC---CCSCCEEETTEEEEECTT------SEEEEEETTTCCEEEEEECCC-----CCCCCCEEE
T ss_pred EEECCCCCEEEEEeCCCc---eEcCCEEECCEEEEEcCC------CeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE
Confidence 99988764 76643211 122234568888875432 479999987764 876543221 1222334555
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
++.+|+ |.. ...+.+||+++.+ |+.-
T Consensus 188 ~~~v~~-g~~-----~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 188 FGAAVV-GGD-----NGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp TTEEEE-CCT-----TTEEEEEETTTCCEEEEEE
T ss_pred CCEEEE-EcC-----CCEEEEEECCCCcEEEEEe
Confidence 888777 322 1368999987664 7653
No 30
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.26 E-value=0.0029 Score=53.97 Aligned_cols=111 Identities=9% Similarity=0.006 Sum_probs=78.5
Q ss_pred ceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCC
Q psy11771 182 YCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 182 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
..++...++.||+..|..+ .+..+|+.+.+-...- ++......+++..+++||+....+ +.+++||+++
T Consensus 57 tqGL~~~~~~Ly~stG~~g-----~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~-----~~v~V~D~~T 125 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQG-----TLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTE-----GLLFTWSGMP 125 (268)
T ss_dssp EEEEEEETTEEEEEETTTT-----EEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSS-----CEEEEEETTT
T ss_pred cceEEEECCEEEEEcCCCC-----EEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccC-----CEEEEEECCc
Confidence 3466677899999988543 3888999987643322 555445566778899999986543 6899999988
Q ss_pred CeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 262 NSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 262 ~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
.+-. ..++.+..+.+++.-+++||+.-| .+.+..+||++.+=
T Consensus 126 l~~~--~ti~~~~eGwGLt~Dg~~L~vSdG------s~~l~~iDp~T~~v 167 (268)
T 3nok_A 126 PQRE--RTTRYSGEGWGLCYWNGKLVRSDG------GTMLTFHEPDGFAL 167 (268)
T ss_dssp TEEE--EEEECSSCCCCEEEETTEEEEECS------SSEEEEECTTTCCE
T ss_pred CcEE--EEEeCCCceeEEecCCCEEEEECC------CCEEEEEcCCCCeE
Confidence 7543 222333345667777889999876 35799999998754
No 31
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.93 E-value=7.2e-05 Score=54.69 Aligned_cols=32 Identities=19% Similarity=0.162 Sum_probs=27.3
Q ss_pred CCCCCccCChHHHHHHHHHHHHhc--------ccccccccc
Q psy11771 40 LYGRPAVNSSCGNYILPTAWVSVA--------LQLLRHVKL 72 (347)
Q Consensus 40 l~~~~~v~~E~~v~~~~~~Wv~~~--------~~ll~~vr~ 72 (347)
|++++ +.+|++||+|+++|++|| ++|+++||+
T Consensus 60 lL~sd-v~~E~~vf~av~~Wv~~d~~~R~~~~~~Ll~~VR~ 99 (105)
T 2eqx_A 60 IISDG-VPCSQNPTEAIEAWINFNKEEREAFAESLRTSLKE 99 (105)
T ss_dssp HHHTC-EETTSCHHHHHHHHHHTTHHHHHHHHHHHHHHCCE
T ss_pred HHcCC-CCCHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 55555 999999999999999998 778888874
No 32
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.91 E-value=0.039 Score=47.19 Aligned_cols=112 Identities=19% Similarity=0.210 Sum_probs=74.7
Q ss_pred eEEEEEC-CEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCC
Q psy11771 183 CRIAVVE-NCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 183 ~~~~~~~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
++++..+ +.+|+..|..+ .+.+..+|+.+++-...-+++......+++..+++||+..-.+ +.+.+||+.+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~-----~~v~viD~~t 95 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLK-----NIGFIYDRRT 95 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTC-----SEEEEEETTT
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecC-----CEEEEEECCC
Confidence 5666555 89999877432 3779999999987655434444444566777789999986432 6899999987
Q ss_pred CeEEEcCCCCCC-CcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 262 NSWEPIAPMLSR-RSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 262 ~~W~~~~~~~~~-~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.+= +..++.+ ..+.+++.-++++|+..| .+.+..+|+++.+
T Consensus 96 ~~v--~~~i~~g~~~g~glt~Dg~~l~vs~g------s~~l~viD~~t~~ 137 (266)
T 2iwa_A 96 LSN--IKNFTHQMKDGWGLATDGKILYGSDG------TSILYEIDPHTFK 137 (266)
T ss_dssp TEE--EEEEECCSSSCCEEEECSSSEEEECS------SSEEEEECTTTCC
T ss_pred CcE--EEEEECCCCCeEEEEECCCEEEEECC------CCeEEEEECCCCc
Confidence 643 2222222 233444444677998754 3589999998865
No 33
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=96.83 E-value=0.15 Score=41.72 Aligned_cols=143 Identities=13% Similarity=0.102 Sum_probs=82.4
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEe--C----CCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSS--C----PAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--~----~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~ 209 (347)
+++..++++|+|=| ..+|+++.....+.. + +.+|. ....+.... ++++|+|-| +..|+
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~-~iDAa~~~~~~~~iyfFkG-------~~~w~ 92 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPN-RIDAAYEHPSHDLIFIFRG-------RKFWA 92 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCS-SCCEEEEETTTTEEEEEET-------TEEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCC-CccEEEEeccCCcEEEEcc-------CEEEE
Confidence 44557999999977 557777754433211 1 23442 222222222 689999988 66888
Q ss_pred EeCCCCcE---EecCC--CCCCCcceEEEE-E--CCEEEEEcccCCCccCCeEEEEECCCCeEEEc---------CCCCC
Q psy11771 210 LDPRMGKW---APVPS--MSSRRSSCGVAA-L--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI---------APMLS 272 (347)
Q Consensus 210 yd~~~~~W---~~~~~--~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~---------~~~~~ 272 (347)
|+..+-.- ..+.. +|.......++. . ++++|++-| +..|+||..+++=..- +.+|
T Consensus 93 ~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip- 164 (207)
T 1pex_A 93 LNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDFPGIG- 164 (207)
T ss_dssp ESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHSTTSC-
T ss_pred EeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcCCCCC-
Confidence 87432111 12322 332111223333 3 489999988 6889999876542211 1222
Q ss_pred CCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 273 RRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 273 ~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
...-++...++++|.|-| +..+.||..+++
T Consensus 165 -~~iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~ 194 (207)
T 1pex_A 165 -DKVDAVYEKNGYIYFFNG-------PIQFEYSIWSNR 194 (207)
T ss_dssp -SCCSEEEEETTEEEEEET-------TEEEEEETTTTE
T ss_pred -CCccEEEEcCCcEEEEEC-------CEEEEEeCCccE
Confidence 122344456999999988 478899987764
No 34
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=96.72 E-value=0.29 Score=43.51 Aligned_cols=144 Identities=18% Similarity=0.164 Sum_probs=86.3
Q ss_pred EEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCc--------cceEEEEECCEEEEEcCcCCCCccceEE
Q psy11771 139 CSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRR--------RYCRIAVVENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 139 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r--------~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 208 (347)
+..++.||+. .. ...+..+|+.+.+ |+.-...+... .....+..++.+|+.+. ...+.
T Consensus 185 ~~~~~~v~~g-~~-----~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~ 252 (376)
T 3q7m_A 185 TTAFGAAVVG-GD-----NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLT 252 (376)
T ss_dssp EEETTEEEEC-CT-----TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECT------TSCEE
T ss_pred EEECCEEEEE-cC-----CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEec------CcEEE
Confidence 3446776653 21 2468899987764 76532222111 22333456889988752 24689
Q ss_pred EEeCCCC--cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEcCCCCCCCcceEEEEECC
Q psy11771 209 RLDPRMG--KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPIAPMLSRRSTHEVVNIEG 284 (347)
Q Consensus 209 ~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~~~ 284 (347)
++|+.+. .|+.... . ....+..++.||+.... ..+++||+.+.+ |+.-. +. .....+.+..++
T Consensus 253 ~~d~~tG~~~w~~~~~--~---~~~~~~~~~~l~~~~~~------g~l~~~d~~tG~~~w~~~~-~~-~~~~~~~~~~~~ 319 (376)
T 3q7m_A 253 ALDLRSGQIMWKRELG--S---VNDFIVDGNRIYLVDQN------DRVMALTIDGGVTLWTQSD-LL-HRLLTSPVLYNG 319 (376)
T ss_dssp EEETTTCCEEEEECCC--C---EEEEEEETTEEEEEETT------CCEEEEETTTCCEEEEECT-TT-TSCCCCCEEETT
T ss_pred EEECCCCcEEeeccCC--C---CCCceEECCEEEEEcCC------CeEEEEECCCCcEEEeecc-cC-CCcccCCEEECC
Confidence 9998776 4765321 1 23456678999987542 478999998764 76531 11 122233455689
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCc--EEE
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNK--WQL 313 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~ 313 (347)
.||+... ...++++|+++.+ |+.
T Consensus 320 ~l~v~~~------~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 320 NLVVGDS------EGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp EEEEECT------TSEEEEEETTTCCEEEEE
T ss_pred EEEEEeC------CCeEEEEECCCCcEEEEE
Confidence 9888543 1369999998876 553
No 35
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.67 E-value=0.022 Score=50.93 Aligned_cols=145 Identities=12% Similarity=0.111 Sum_probs=81.1
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+.+|+.|+.+ ..+.++|..+++....-... ..-.+++.. + ..+|+.|+.+ ..+..||..+.+....
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d~~~~~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPVG--SNPMGAVISPDGTKVYVANAHS-----NDVSIIDTATNNVIAT 69 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEECS--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEETTTTEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeecC--CCcceEEECCCCCEEEEECCCC-----CeEEEEECCCCeEEEE
Confidence 3567777644 46899999887643321111 112233332 3 4677777543 5789999988765443
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEeccCCCC
Q psy11771 221 PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGNDGSS 296 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~ 296 (347)
-..+. .-.+++.. +..||+.+..+ ..+.+||+.+++....-.. ......++.. ++ .||+.++.+
T Consensus 70 ~~~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~--~~~~~~~~~s~dg~~l~~~~~~~--- 137 (391)
T 1l0q_A 70 VPAGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT--GKSPLGLALSPDGKKLYVTNNGD--- 137 (391)
T ss_dssp EECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC--SSSEEEEEECTTSSEEEEEETTT---
T ss_pred EECCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC--CCCcceEEECCCCCEEEEEeCCC---
Confidence 22222 22233332 34566665432 5799999998865443222 1122233333 33 577776543
Q ss_pred CccEEEEEeCCCCcEEE
Q psy11771 297 SLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~~ 313 (347)
..+.+||..+.+...
T Consensus 138 --~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 138 --KTVSVINTVTKAVIN 152 (391)
T ss_dssp --TEEEEEETTTTEEEE
T ss_pred --CEEEEEECCCCcEEE
Confidence 478999988876554
No 36
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.53 E-value=0.036 Score=49.52 Aligned_cols=145 Identities=14% Similarity=0.086 Sum_probs=81.3
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
..||+.|+.+ ..+.++|..+++....-.... .-.+++.. +..||+.+.. ...+..||+.+++....
T Consensus 44 ~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~~~--~v~~~~~spdg~~l~~~~~~-----~~~v~v~d~~~~~~~~~ 111 (391)
T 1l0q_A 44 TKVYVANAHS-----NDVSIIDTATNNVIATVPAGS--SPQGVAVSPDGKQVYVTNMA-----SSTLSVIDTTSNTVAGT 111 (391)
T ss_dssp SEEEEEEGGG-----TEEEEEETTTTEEEEEEECSS--SEEEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEEE
T ss_pred CEEEEECCCC-----CeEEEEECCCCeEEEEEECCC--CccceEECCCCCEEEEEECC-----CCEEEEEECCCCeEEEE
Confidence 4577777643 468999998876543222222 22233332 4467776643 25699999998765433
Q ss_pred CCCCCCCcceEEEEE-C-CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEeccCCCC
Q psy11771 221 PSMSSRRSSCGVAAL-D-GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-E-GYLLTMGGNDGSS 296 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~ 296 (347)
-.... ...+++.. + ..+|+.++.+ ..+..||..+.+....-... .....++.. + ..||+.++.+
T Consensus 112 ~~~~~--~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~--~~~~~~~~~~dg~~l~~~~~~~--- 179 (391)
T 1l0q_A 112 VKTGK--SPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG--RSPKGIAVTPDGTKVYVANFDS--- 179 (391)
T ss_dssp EECSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC--SSEEEEEECTTSSEEEEEETTT---
T ss_pred EeCCC--CcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC--CCcceEEECCCCCEEEEEeCCC---
Confidence 22221 22333332 3 3577776543 58999999888765432221 111222222 3 4677766543
Q ss_pred CccEEEEEeCCCCcEEE
Q psy11771 297 SLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~~ 313 (347)
..+.+||+.+.+...
T Consensus 180 --~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 180 --MSISVIDTVTNSVID 194 (391)
T ss_dssp --TEEEEEETTTTEEEE
T ss_pred --CEEEEEECCCCeEEE
Confidence 468999988876543
No 37
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.26 E-value=0.42 Score=39.94 Aligned_cols=149 Identities=14% Similarity=0.094 Sum_probs=78.9
Q ss_pred ECCEEEE-EcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYA-CGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv-~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.++++|+ .... ...+.+||+.+........... ....+++.. ++++|+... ...+.+||+.+....
T Consensus 33 ~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~ 100 (270)
T 1rwi_B 33 SAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFNGL-YQPQGLAVDGAGTVYVTDF------NNRVVTLAAGSNNQT 100 (270)
T ss_dssp TTCCEEEEECSS-----SCEEEEECC-----EECCCCSC-CSCCCEEECTTCCEEEEET------TTEEEEECTTCSCCE
T ss_pred CCCCEEEEccCC-----CCcEEEecCCCcccceEeeCCc-CCcceeEECCCCCEEEEcC------CCEEEEEeCCCceEe
Confidence 3578998 5332 2568889987766544332111 122233333 567998764 256899998876544
Q ss_pred ecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCCC
Q psy11771 219 PVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGSS 296 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~ 296 (347)
..... ....-.+++.- ++.+|+....+ ..+.+||..+........... ..-.+++.- +++||+....
T Consensus 101 ~~~~~-~~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~---- 169 (270)
T 1rwi_B 101 VLPFD-GLNYPEGLAVDTQGAVYVADRGN-----NRVVKLAAGSKTQTVLPFTGL-NDPDGVAVDNSGNVYVTDTD---- 169 (270)
T ss_dssp ECCCC-SCSSEEEEEECTTCCEEEEEGGG-----TEEEEECTTCCSCEECCCCSC-CSCCCEEECTTCCEEEEEGG----
T ss_pred eeecC-CcCCCcceEECCCCCEEEEECCC-----CEEEEEECCCceeEeeccccC-CCceeEEEeCCCCEEEEECC----
Confidence 44321 11122333333 67899875432 578888877655443321111 111233333 5788887643
Q ss_pred CccEEEEEeCCCCcEEE
Q psy11771 297 SLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~~ 313 (347)
...+.+||+....-..
T Consensus 170 -~~~i~~~~~~~~~~~~ 185 (270)
T 1rwi_B 170 -NNRVVKLEAESNNQVV 185 (270)
T ss_dssp -GTEEEEECTTTCCEEE
T ss_pred -CCEEEEEecCCCceEe
Confidence 2468899988765443
No 38
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=96.15 E-value=0.4 Score=38.73 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=83.1
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCC--cEE--e----CCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTG--VWS--S----CPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~--~----~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~ 207 (347)
+++..++++|+|=| +.+|+++.... ... . .+.+|.. -..+... .++++|++-| +..
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~-IDAa~~~~~~~~~yfFkG-------~~y 75 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRK-LDSVFEEPLSKKLFFFSG-------RQV 75 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSS-CSEEEECTTTCCEEEEET-------TEE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCC-ccEEEEECCCCeEEEEeC-------CEE
Confidence 45567999999977 56788876542 211 1 1234432 2222111 2678999988 668
Q ss_pred EEEeCCCCcE-EecC--CCCCC--CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-----c----CCCCCC
Q psy11771 208 ERLDPRMGKW-APVP--SMSSR--RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-----I----APMLSR 273 (347)
Q Consensus 208 ~~yd~~~~~W-~~~~--~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~----~~~~~~ 273 (347)
|+|+..+..- ..+. .+|.. ....+....++++|++-| +..++||..+++=.. + +.+|
T Consensus 76 w~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp-- 146 (195)
T 1itv_A 76 WVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMFPGVP-- 146 (195)
T ss_dssp EEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHSTTSC--
T ss_pred EEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcCCCCC--
Confidence 8887543111 1121 23321 223333323689999977 578999987754221 1 1222
Q ss_pred CcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 274 RSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 274 ~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
....++...++.+|.|-| +..+.||..+.+
T Consensus 147 ~~idaa~~~~g~~Yffkg-------~~y~~~~~~~~~ 176 (195)
T 1itv_A 147 LDTHDVFQFREKAYFCQD-------RFYWRVSSRSEL 176 (195)
T ss_dssp SSCSEEEEETTEEEEEET-------TEEEEEECCTTC
T ss_pred CCCCEEEEeCCeEEEEeC-------CEEEEEECCccE
Confidence 223345556899999988 368889887664
No 39
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.14 E-value=0.51 Score=46.04 Aligned_cols=118 Identities=16% Similarity=0.246 Sum_probs=72.7
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCC--------ccceEEEEECCEEEEEcCcCCCCccceE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTR--------RRYCRIAVVENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 207 (347)
-++.++.||+... ...++.+|..+.+ |+.-...+.. ....+.+..+++||+... ...+
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~------dg~l 140 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW------DGRL 140 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC------CCEE
Confidence 3457999999865 2468999988775 8764432211 112345567899998643 2568
Q ss_pred EEEeCCCCc--EEecCC-C-CC-CCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEc
Q psy11771 208 ERLDPRMGK--WAPVPS-M-SS-RRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPI 267 (347)
Q Consensus 208 ~~yd~~~~~--W~~~~~-~-p~-~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 267 (347)
+.+|..+.+ |+.-.. - +. .....+.++.++++|+..+.........++.||.++.+ |+.-
T Consensus 141 ~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 141 IALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999988764 876432 1 11 11122345568888876543222234679999998764 8764
No 40
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.13 E-value=0.47 Score=45.29 Aligned_cols=119 Identities=9% Similarity=0.149 Sum_probs=71.2
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeC-CCCc--EEeCCCCCCC--------ccceEEEEECCEEEEEcCcCCCCccce
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDP-LTGV--WSSCPAMTTR--------RRYCRIAVVENCLYALGGFDSTNYQAS 206 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~ 206 (347)
-++.++.||+.... ...++++|. .+.+ |+.-...... ....+.+..+++||+... ...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 58 PLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC------CCE
Confidence 34569999998652 246899998 7764 8764332211 112234567899998743 256
Q ss_pred EEEEeCCCC--cEEecCCC-CCC-CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC--eEEEc
Q psy11771 207 VERLDPRMG--KWAPVPSM-SSR-RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN--SWEPI 267 (347)
Q Consensus 207 ~~~yd~~~~--~W~~~~~~-p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~ 267 (347)
++++|..+. .|+.-..- +.. ....+-++.++++|+..+.........++.||.++. .|+.-
T Consensus 127 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 899998876 48754221 111 112233456899887654211112357999999865 48754
No 41
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.19 Score=44.22 Aligned_cols=106 Identities=13% Similarity=0.163 Sum_probs=61.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--C--CEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--E--NCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
++..++.|+.+ ..+.+||....+++....+............ + +.+++.|+.+ ..+..||..+.+|
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~ 91 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 91 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccC-----CEEEEEEcCCCce
Confidence 56677777754 3477788776666554433322222222232 2 5666666643 4588899998888
Q ss_pred EecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 218 APVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
..+..+.........+.+ + +.++++|+.+ ..+..||..+.
T Consensus 92 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~ 135 (379)
T 3jrp_A 92 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 135 (379)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTT
T ss_pred eEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCC
Confidence 766544432222333333 3 5667777654 47888888765
No 42
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.11 E-value=0.53 Score=39.80 Aligned_cols=153 Identities=9% Similarity=-0.016 Sum_probs=83.9
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC---CC-ccceEEEE--ECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT---TR-RRYCRIAV--VENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~---~~-r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
++.+|+.+..+ ..+.+||+............ .. ....+++. .++++|+.+... ...+.+||....
T Consensus 40 ~g~l~v~~~~~-----~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~----~~~i~~~d~~g~ 110 (286)
T 1q7f_A 40 QNDIIVADTNN-----HRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSP----THQIQIYNQYGQ 110 (286)
T ss_dssp TCCEEEEEGGG-----TEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGG----GCEEEEECTTSC
T ss_pred CCCEEEEECCC-----CEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCC----CCEEEEECCCCc
Confidence 57888885432 46889998765444433211 11 12234444 267999986421 256889996555
Q ss_pred cEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccC
Q psy11771 216 KWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGND 293 (347)
Q Consensus 216 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~ 293 (347)
.-..+... ......+++. -++.+|+....+ ..+.+||+.......+........-.+++.- +++||+.+..
T Consensus 111 ~~~~~~~~-~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~- 183 (286)
T 1q7f_A 111 FVRKFGAT-ILQHPRGVTVDNKGRIIVVECKV-----MRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNR- 183 (286)
T ss_dssp EEEEECTT-TCSCEEEEEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGG-
T ss_pred EEEEecCc-cCCCceEEEEeCCCCEEEEECCC-----CEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECC-
Confidence 44333321 1111233333 367899876432 5789999876654444321111111223332 5889987643
Q ss_pred CCCCccEEEEEeCCCCcEEEc
Q psy11771 294 GSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~W~~~ 314 (347)
.+.+.+||+..+....+
T Consensus 184 ----~~~i~~~~~~g~~~~~~ 200 (286)
T 1q7f_A 184 ----AHCVKVFNYEGQYLRQI 200 (286)
T ss_dssp ----GTEEEEEETTCCEEEEE
T ss_pred ----CCEEEEEcCCCCEEEEE
Confidence 24789999876654444
No 43
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=96.03 E-value=0.18 Score=41.82 Aligned_cols=139 Identities=12% Similarity=0.048 Sum_probs=79.3
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeC------C---------CCcEEeCCCCCCCccceEEEE--ECCEEEEEcCcCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDP------L---------TGVWSSCPAMTTRRRYCRIAV--VENCLYALGGFDSTNY 203 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~------~---------~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~ 203 (347)
.++++|+|-| ..+|+++. . +..|..++.-+.......++. .++++|+|-|
T Consensus 12 ~~ge~~fFk~-------~~~wr~~~~~~~~~~~~~~~p~~I~~~Wp~LP~~~f~~~~iDAa~~~~~g~~~fFkg------ 78 (225)
T 3oyo_A 12 SEYEVYFFAK-------NKYVRLHYTPGASSDTILTNLRLISSGFPSLAGTPFAEPGIDCSFHTEASEAYVFSG------ 78 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTCSCCEEEEEEEEHHHHCGGGTTSTTTTTCCSEEEECSTTEEEEEET------
T ss_pred CCCEEEEEEC-------CEEEEEecccccccCcccCCceehhhhcccCCCccCCCCCEeEEEEcCCCeEEEEcC------
Confidence 3689999977 45777761 1 222443432222112333333 4899999987
Q ss_pred cceEEEEeCC----CCcEEe--------cCCCCCC--CcceEEE-E--ECCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 204 QASVERLDPR----MGKWAP--------VPSMSSR--RSSCGVA-A--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 204 ~~~~~~yd~~----~~~W~~--------~~~~p~~--r~~~~~~-~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
+..|+||.. .+.... .+.+|.. .....++ . .++++|++-| +..|+||..+++-..
T Consensus 79 -~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG-------~~yw~~d~~~~~~~~ 150 (225)
T 3oyo_A 79 -NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG-------NKYVRIAYDSKQLVG 150 (225)
T ss_dssp -TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred -CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC-------CeEEEEECCCCeecC
Confidence 678888652 222211 1233331 0012233 2 3689999988 678999987776553
Q ss_pred c----C-CCCC------CCcceEEEE--ECCEEEEEeccCCCCCccEEEEEeCC
Q psy11771 267 I----A-PMLS------RRSTHEVVN--IEGYLLTMGGNDGSSSLNSVEKYDPK 307 (347)
Q Consensus 267 ~----~-~~~~------~~~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~ 307 (347)
- . ..|. +...-++.. .++++|+|-| +..|.||..
T Consensus 151 gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 151 NIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp EEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred CCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 1 1 1221 222233444 3789999988 478999987
No 44
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=95.90 E-value=0.3 Score=40.84 Aligned_cols=145 Identities=14% Similarity=0.084 Sum_probs=80.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++++|+... + ..+.+||+.++......... .....+++.. ++++|+.... ...+.+|+..+......
T Consensus 77 ~g~l~v~~~-~-----~~i~~~d~~~~~~~~~~~~~-~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~ 144 (270)
T 1rwi_B 77 AGTVYVTDF-N-----NRVVTLAAGSNNQTVLPFDG-LNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVL 144 (270)
T ss_dssp TCCEEEEET-T-----TEEEEECTTCSCCEECCCCS-CSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEEC
T ss_pred CCCEEEEcC-C-----CEEEEEeCCCceEeeeecCC-cCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEee
Confidence 567888754 2 46899998877654443211 1122334333 6789987542 25688888776554433
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCC
Q psy11771 221 PSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSS 297 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~ 297 (347)
.... ...-.+++.- ++++|+....+ ..+.+||+....-........ .....+.+ ++.||+....+
T Consensus 145 ~~~~-~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~~~---- 212 (270)
T 1rwi_B 145 PFTG-LNDPDGVAVDNSGNVYVTDTDN-----NRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEHNT---- 212 (270)
T ss_dssp CCCS-CCSCCCEEECTTCCEEEEEGGG-----TEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEEEETTT----
T ss_pred cccc-CCCceeEEEeCCCCEEEEECCC-----CEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEEEECCC----
Confidence 2111 1111233333 57899876432 578999998765443321111 22223333 56888876432
Q ss_pred ccEEEEEeCCCCcE
Q psy11771 298 LNSVEKYDPKLNKW 311 (347)
Q Consensus 298 ~~~v~~yd~~~~~W 311 (347)
+.+.+||+....-
T Consensus 213 -~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 213 -NQVVKLLAGSTTS 225 (270)
T ss_dssp -SCEEEECTTCSCC
T ss_pred -CcEEEEcCCCCcc
Confidence 3589999877643
No 45
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=95.85 E-value=0.72 Score=45.08 Aligned_cols=118 Identities=16% Similarity=0.260 Sum_probs=71.8
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCC--------ccceEEEEECCEEEEEcCcCCCCccceE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTR--------RRYCRIAVVENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 207 (347)
-++.++.||+.+. ...++.+|..+.+ |+.-...+.. ....+.+..+++||+... ...+
T Consensus 66 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l 133 (689)
T 1yiq_A 66 PIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL------DGRL 133 (689)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT------TSEE
T ss_pred CEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc------CCEE
Confidence 3457999999865 2458999988765 8764332211 012234567899988653 2568
Q ss_pred EEEeCCCCc--EEecCC-CCC--CCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEc
Q psy11771 208 ERLDPRMGK--WAPVPS-MSS--RRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPI 267 (347)
Q Consensus 208 ~~yd~~~~~--W~~~~~-~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 267 (347)
+.+|..+.+ |+.... -+. .....+-++.++.+|+..+.........++.||..+.+ |+.-
T Consensus 134 ~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 134 EAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 999988764 876543 111 11122335678988874332211234689999998775 8754
No 46
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=95.69 E-value=1.2 Score=43.26 Aligned_cols=118 Identities=15% Similarity=0.238 Sum_probs=71.6
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCC--------ccceEEEEECCEEEEEcCcCCCCccceE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTR--------RRYCRIAVVENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~--------r~~~~~~~~~~~lyv~GG~~~~~~~~~~ 207 (347)
-++.++.||+... ...++.+|..+.+ |+.-...+.. ....+.+..+++||+... ...+
T Consensus 62 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 62 PLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp CEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 3457999999865 2468889987765 8764332211 012234557889988643 2568
Q ss_pred EEEeCCCCc--EEecCCCCC--CCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEc
Q psy11771 208 ERLDPRMGK--WAPVPSMSS--RRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPI 267 (347)
Q Consensus 208 ~~yd~~~~~--W~~~~~~p~--~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 267 (347)
+.+|..+.+ |+....-+. .....+-++.++++|+..+.........++.||.++.+ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999988764 876542111 11122345678888875432222234689999998764 8763
No 47
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=95.65 E-value=0.35 Score=44.59 Aligned_cols=141 Identities=13% Similarity=0.172 Sum_probs=80.4
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCC---------cEEeCCCCCCCccceEEEE--ECCEEEEEcCcCCCCccc
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTG---------VWSSCPAMTTRRRYCRIAV--VENCLYALGGFDSTNYQA 205 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~ 205 (347)
+++..++++|+|-| ..+|+++.... .|.. +|.. .. ++.. .++++|+|-| +
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~---LP~~-iD-Aa~~~~~~g~~~fFKg-------~ 327 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQ---LPNG-LE-AAYEFADRDEVRFFKG-------N 327 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTT---SCSS-CC-EEEEEGGGTEEEEEET-------T
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccC---CCCC-ee-EEEEEcCCCeEEEEeC-------C
Confidence 45568999999987 44666654432 3433 3322 12 2222 2689999987 6
Q ss_pred eEEEEeCCCCc--E-EecC---CCCCCCcce-EEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEE-----c----
Q psy11771 206 SVERLDPRMGK--W-APVP---SMSSRRSSC-GVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-----I---- 267 (347)
Q Consensus 206 ~~~~yd~~~~~--W-~~~~---~~p~~r~~~-~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~---- 267 (347)
.+|+|+..+-. + ..+. .+|...... ++... ++++|++-| +..|+||..+.+-.. +
T Consensus 328 ~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~f 400 (450)
T 1su3_A 328 KYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHDF 400 (450)
T ss_dssp EEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHHS
T ss_pred EEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhcC
Confidence 68888753210 0 0111 123211112 22233 589999987 689999987654221 1
Q ss_pred CCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 268 APMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
+.+| ..--+++..++++|+|-| +..|.||..+.+=.
T Consensus 401 pgip--~~iDAA~~~~g~~YFFkg-------~~ywr~d~~~~~v~ 436 (450)
T 1su3_A 401 PGIG--HKVDAVFMKDGFFYFFHG-------TRQYKFDPKTKRIL 436 (450)
T ss_dssp TTSC--SCCSEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCC--CCccEEEEcCCeEEEEeC-------CEEEEEECCcceEe
Confidence 1222 122344456899999988 46889998776543
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=95.59 E-value=0.26 Score=44.53 Aligned_cols=139 Identities=7% Similarity=0.002 Sum_probs=78.3
Q ss_pred eEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCC---CCCcceEEEE
Q psy11771 159 SMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMS---SRRSSCGVAA 234 (347)
Q Consensus 159 ~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p---~~r~~~~~~~ 234 (347)
.++.+|+.+.+++.+..++......+++.. ++++++.++.+ ..+..||+.+.+.....+.. ........+.
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~ 176 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLED-----EGMDVLDINSGQTVRLSPPEKYKKKLGFVETIS 176 (433)
T ss_dssp CEEECCBTTCSEEEEEEEECSSCBCCCEESSSSEEEEEBTTS-----SSEEEEETTTCCEEEECCCHHHHTTCCEEEEEE
T ss_pred EEEEECCCCCcceEEEEEcCCCCceEEEEeCCCeEEEEeCCC-----CeEEEEECCCCeEeeecCcccccccCCceeEEE
Confidence 688888877766554443322222222222 77888887643 45899999988766543321 1111222233
Q ss_pred E--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 235 L--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 235 ~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+ ++.+++.|+.+ ..+..||..+.+....-... ......++.. +..+|+.++.+ ..+.+||+.+.+
T Consensus 177 ~~~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~ 245 (433)
T 3bws_A 177 IPEHNELWVSQMQA-----NAVHVFDLKTLAYKATVDLT-GKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKL 245 (433)
T ss_dssp EGGGTEEEEEEGGG-----TEEEEEETTTCCEEEEEECS-SSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTE
T ss_pred EcCCCEEEEEECCC-----CEEEEEECCCceEEEEEcCC-CCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCc
Confidence 3 68888888754 57899998876533221111 1111222222 34576766433 379999998876
Q ss_pred EEE
Q psy11771 311 WQL 313 (347)
Q Consensus 311 W~~ 313 (347)
...
T Consensus 246 ~~~ 248 (433)
T 3bws_A 246 EIR 248 (433)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 49
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=95.59 E-value=0.56 Score=37.91 Aligned_cols=145 Identities=11% Similarity=0.049 Sum_probs=80.9
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCC--cE-EeC----CCCCCCccceEEEEECCEEEEEcCcCCCCccceEEE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTG--VW-SSC----PAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W-~~~----~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 209 (347)
+++..++++|+|-| +.+|+++.... .. +.+ +.+|. ....+....++++|++-| +..|+
T Consensus 10 A~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~-~iDAa~~~~~g~~yfFkg-------~~yw~ 74 (196)
T 3c7x_A 10 TVAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPA-SINTAYERKDGKFVFFKG-------DKHWV 74 (196)
T ss_dssp EEEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCS-SCCEEEECTTSCEEEEET-------TEEEE
T ss_pred EEEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCC-CccEEEEeCCCcEEEecC-------CEEEE
Confidence 45577999999988 66788764310 00 111 23343 222222224788999987 67888
Q ss_pred EeCCCCcE---EecC----CCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEE-----cCCC-CCCCc
Q psy11771 210 LDPRMGKW---APVP----SMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-----IAPM-LSRRS 275 (347)
Q Consensus 210 yd~~~~~W---~~~~----~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~~~-~~~~~ 275 (347)
|+..+... ..+. .+|......+... .++++|++-| +..++||..+++-.. +... ..+..
T Consensus 75 ~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~v~~gyPk~i~~~~gip~~ 147 (196)
T 3c7x_A 75 FDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRAVDSEYPKNIKVWEGIPES 147 (196)
T ss_dssp EETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECTTCSEEGGGSBTCCSS
T ss_pred EeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcccccCCCCccHHHCCCcCCC
Confidence 88542110 1121 2443333322222 2689999987 578999987754321 1111 11122
Q ss_pred ceEEEEE-CC-EEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 276 THEVVNI-EG-YLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 276 ~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
--++... ++ ++|+|-| +..+.||..+.+
T Consensus 148 idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 148 PRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp CSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred cceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 2333344 44 9999988 478999987763
No 50
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=95.53 E-value=0.5 Score=43.61 Aligned_cols=134 Identities=21% Similarity=0.250 Sum_probs=80.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeC--CCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCc---
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSC--PAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGK--- 216 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--- 216 (347)
++++|+|-| +..|+||..+++.... +.++ .. -++...++++|+|-| +..++||..+.+
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~i-DAA~~~~g~~YfFkG-------~~y~rfd~~~~~v~~ 220 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC-TSALRWLGRYYCFQG-------NQFLRFNPVSGEVPP 220 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC-SEEEEETTEEEEEET-------TEEEEECTTTCCCCT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCCCCC--cc-chheeeCCceEEEEC-------CEEEEEcCccCcccC
Confidence 688999988 6789999988765432 2233 22 344455799999988 678888876543
Q ss_pred ---------EEecCCCC------------------CCCcceEEE-E-ECCEEEEEcccCCCccCCeEEEEECCCCeEE--
Q psy11771 217 ---------WAPVPSMS------------------SRRSSCGVA-A-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWE-- 265 (347)
Q Consensus 217 ---------W~~~~~~p------------------~~r~~~~~~-~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-- 265 (347)
|..++... .+.....++ . .+|++|++-| +..|++|...+.+.
T Consensus 221 gyPk~is~~w~~c~~~g~~~~~~~st~~~~~p~~C~p~~~~DAi~~~~~G~tYFFKg-------~~yWR~~~~~~~~~p~ 293 (460)
T 1qhu_A 221 GYPLDVRDYFLSCPGRGHRSSHRNSTQHGHESTRCDPDLVLSAMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSW 293 (460)
T ss_dssp TCCEEHHHHTSCCTTCCSCC-------CCCTTTTTCTTCCCCEEEECTTCCEEEEET-------TEEEECTTGGGCCCCE
T ss_pred CCCcchhhcccCCCCCCCccccccCCccccccccccCCCCcCEEEecCCCeEEEEeC-------CEEEEEecCCCCcCcc
Confidence 22111100 001122233 3 4689999977 45677766543321
Q ss_pred Ec----CCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 266 PI----APMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 266 ~~----~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
.+ +.+|.. --++...++++|+|=| +.+++|+..+
T Consensus 294 ~Is~~WpglP~~--IDAAf~~~~~~yfFkG-------~~yw~f~~~~ 331 (460)
T 1qhu_A 294 PIAHQWPQGPST--VDAAFSWEDKLYLIQD-------TKVYVFLTKG 331 (460)
T ss_dssp EGGGTCTTSCSS--CSEEEEETTEEEEEET-------TEEEEEECSB
T ss_pred chhhhccCCCCC--CcEEEEECCeEEEEeC-------CEEEEEeCCC
Confidence 12 233333 2344456899999977 4688898653
No 51
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=95.50 E-value=0.22 Score=43.84 Aligned_cols=155 Identities=17% Similarity=0.219 Sum_probs=83.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC-C-CCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM-T-TRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
.++++++.||.+ ..+.++|..+++|.....+ . ....-.+++.. +++.++.|+.+ ..+..||..+..+
T Consensus 26 p~g~~las~~~D-----~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D-----~~v~iw~~~~~~~ 95 (345)
T 3fm0_A 26 PAGTLLASCGGD-----RRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD-----ATTCIWKKNQDDF 95 (345)
T ss_dssp TTSSCEEEEETT-----SCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECCC-E
T ss_pred CCCCEEEEEcCC-----CeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC-----CcEEEEEccCCCe
Confidence 367777888765 3577788877776432211 1 11111222222 56666667644 4567788777766
Q ss_pred EecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCC-eEEEcCCCCCCCcceEEEEE--CCEEEEEecc
Q psy11771 218 APVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPIAPMLSRRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~ 292 (347)
..+..+.........+.+ ++.+++.|+.+ ..+..||..+. .+..+..+.........+.+ ++++++.|+.
T Consensus 96 ~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 170 (345)
T 3fm0_A 96 ECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASY 170 (345)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEET
T ss_pred EEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeC
Confidence 554433322222222333 56777777765 46778887654 33333222211122233333 5667777775
Q ss_pred CCCCCccEEEEEeCCCCcEEEcc
Q psy11771 293 DGSSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~W~~~~ 315 (347)
++ .+.+||..+.+|..+.
T Consensus 171 d~-----~i~~w~~~~~~~~~~~ 188 (345)
T 3fm0_A 171 DD-----TVKLYREEEDDWVCCA 188 (345)
T ss_dssp TS-----CEEEEEEETTEEEEEE
T ss_pred CC-----cEEEEEecCCCEEEEE
Confidence 43 5888888888876443
No 52
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=95.45 E-value=1 Score=38.02 Aligned_cols=154 Identities=11% Similarity=0.022 Sum_probs=84.1
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
.++.+|+.+... ...+.+||+..+.......... ....+++.. ++++|+.... ...+.+||+.......
T Consensus 87 ~~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~~~~-~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~ 156 (286)
T 1q7f_A 87 NSGDIIVTERSP----THQIQIYNQYGQFVRKFGATIL-QHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHK 156 (286)
T ss_dssp TTTEEEEEECGG----GCEEEEECTTSCEEEEECTTTC-SCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEE
T ss_pred CCCeEEEEcCCC----CCEEEEECCCCcEEEEecCccC-CCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEE
Confidence 478999886421 2568899965544333322111 122233332 6789987542 2578999987655444
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q psy11771 220 VPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSS 296 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~ 296 (347)
+........-.+++.- ++.+|+....+ ..+.+||+.......+..-.. ......+.+ +++||+....++
T Consensus 157 ~~~~~~~~~p~~i~~~~~g~l~v~~~~~-----~~i~~~~~~g~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~~~-- 228 (286)
T 1q7f_A 157 FGCSKHLEFPNGVVVNDKQEIFISDNRA-----HCVKVFNYEGQYLRQIGGEGI-TNYPIGVGINSNGEILIADNHNN-- 228 (286)
T ss_dssp EECTTTCSSEEEEEECSSSEEEEEEGGG-----TEEEEEETTCCEEEEESCTTT-SCSEEEEEECTTCCEEEEECSSS--
T ss_pred eCCCCccCCcEEEEECCCCCEEEEECCC-----CEEEEEcCCCCEEEEEccCCc-cCCCcEEEECCCCCEEEEeCCCC--
Confidence 4321111112233332 57899876532 689999987665444432111 112223333 678998875321
Q ss_pred CccEEEEEeCCCCcEEEc
Q psy11771 297 SLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~~~ 314 (347)
..+.+||+....-..+
T Consensus 229 --~~i~~~~~~g~~~~~~ 244 (286)
T 1q7f_A 229 --FNLTIFTQDGQLISAL 244 (286)
T ss_dssp --CEEEEECTTSCEEEEE
T ss_pred --EEEEEECCCCCEEEEE
Confidence 2799999866543333
No 53
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.37 E-value=0.32 Score=42.65 Aligned_cols=146 Identities=12% Similarity=0.144 Sum_probs=77.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccc-eEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRY-CRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+++++++|+.+ ..+.+||..+.+++.+..+...... .+++.. +++.++.|+.+ ..+..||..+.++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 56677777644 4688899888876555444322222 222222 55666666643 458889988887765
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCe-EEEcCCCCCC-CcceEEEEE--CCEEEEEeccC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNS-WEPIAPMLSR-RSTHEVVNI--EGYLLTMGGND 293 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~-~~~~~~~~~--~~~lyv~GG~~ 293 (347)
...+.........+.+ ++..+++|+.+ ..+..||..+.. |........+ ......+.+ +++.++.|+.+
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 163 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 163 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCC
Confidence 4332222222222333 56666777654 346666655443 3322221111 122223333 56677777754
Q ss_pred CCCCccEEEEEeCC
Q psy11771 294 GSSSLNSVEKYDPK 307 (347)
Q Consensus 294 ~~~~~~~v~~yd~~ 307 (347)
+ .+.+||..
T Consensus 164 g-----~i~~~d~~ 172 (372)
T 1k8k_C 164 F-----KCRIFSAY 172 (372)
T ss_dssp S-----CEEEEECC
T ss_pred C-----CEEEEEcc
Confidence 3 57888854
No 54
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.36 E-value=0.8 Score=39.99 Aligned_cols=146 Identities=18% Similarity=0.193 Sum_probs=76.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCcc-ceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRR-YCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
-++. ++.|+.+ ..+.++|..+.+-... +..... -.+++.. ++.+++.|+.+ ..+..||..+..-.
T Consensus 153 ~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~ 219 (340)
T 1got_B 153 DDNQ-IVTSSGD-----TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCR 219 (340)
T ss_dssp ETTE-EEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEE
T ss_pred CCCc-EEEEECC-----CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeE
Confidence 3555 4455533 4578889887754321 111111 1122222 56677777754 45888898776432
Q ss_pred ecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 219 PVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
..-.-... .-.+++. -++..++.|+.+ ..+..||..+.+-...-..+........+.+ ++++++.|+.+
T Consensus 220 ~~~~~h~~-~v~~v~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-- 291 (340)
T 1got_B 220 QTFTGHES-DINAICFFPNGNAFATGSDD-----ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD-- 291 (340)
T ss_dssp EEECCCSS-CEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT--
T ss_pred EEEcCCcC-CEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC--
Confidence 21111111 1122222 256777777764 4688899887653222111221222334444 67777777754
Q ss_pred CCccEEEEEeCCCCc
Q psy11771 296 SSLNSVEKYDPKLNK 310 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~ 310 (347)
..+.+||..+.+
T Consensus 292 ---~~i~vwd~~~~~ 303 (340)
T 1got_B 292 ---FNCNVWDALKAD 303 (340)
T ss_dssp ---SEEEEEETTTCC
T ss_pred ---CeEEEEEcccCc
Confidence 368899976653
No 55
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.32 E-value=1.1 Score=37.71 Aligned_cols=148 Identities=9% Similarity=0.023 Sum_probs=81.7
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC-CCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT-TRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.++.+|+..... ..+.+||+. .+.+... ++ ......+++.. ++++|+.... ...+.+||+ +.+..
T Consensus 66 ~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 66 SDGEVWFTENAA-----NKIGRITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIR 132 (299)
T ss_dssp TTSCEEEEETTT-----TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEE
T ss_pred CCCCEEEeCCCC-----CeEEEECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEE
Confidence 367788875422 458889886 4444332 22 12223334433 5789987532 256889998 55555
Q ss_pred ecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 219 PVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
............+++.- ++.+|+.... ...+++||+ +.+..... ++..........+ +++||+....
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~--- 202 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFK-IPTPASGPVGITKGNDDALWFVEII--- 202 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT---
T ss_pred EecCCCCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEee-CCCCCCcceeEEECCCCCEEEEccC---
Confidence 43221112222333333 5788886532 257899999 66666542 1211122223333 5788886532
Q ss_pred CCccEEEEEeCCCCcEEEc
Q psy11771 296 SSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~ 314 (347)
.+.+.+||+ ++++..+
T Consensus 203 --~~~i~~~~~-~g~~~~~ 218 (299)
T 2z2n_A 203 --GNKIGRITT-SGEITEF 218 (299)
T ss_dssp --TTEEEEECT-TCCEEEE
T ss_pred --CceEEEECC-CCcEEEE
Confidence 246899999 7776654
No 56
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=95.30 E-value=1.2 Score=38.30 Aligned_cols=161 Identities=12% Similarity=0.079 Sum_probs=79.8
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCC-CcEEeCC----CCCCCccceEEEEE-CC-EEEEEcCcCCCCccceEEEEeCC--
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLT-GVWSSCP----AMTTRRRYCRIAVV-EN-CLYALGGFDSTNYQASVERLDPR-- 213 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~----~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~-- 213 (347)
..||+.+..+ ..+.+||..+ .+..... ..+.......++.. ++ .+|+.+.. ...+..||..
T Consensus 141 ~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-----~~~i~~~~~~~~ 210 (343)
T 1ri6_A 141 RTLWVPALKQ-----DRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-----NSSVDVWELKDP 210 (343)
T ss_dssp SEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-----TTEEEEEESSCT
T ss_pred CEEEEecCCC-----CEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-----CCEEEEEEecCC
Confidence 3566665222 4688888877 5554321 11111111122222 33 57777642 2567888874
Q ss_pred CCcEE---ecCCCCCC---CcceEEEEE--CC-EEEEEcccCCCccCCeEEEEECC--CCeEEEcCCCCCCCcceEEEEE
Q psy11771 214 MGKWA---PVPSMSSR---RSSCGVAAL--DG-AIYCVGGNDGTMCMSSGERFNVR--RNSWEPIAPMLSRRSTHEVVNI 282 (347)
Q Consensus 214 ~~~W~---~~~~~p~~---r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~--~~~W~~~~~~~~~~~~~~~~~~ 282 (347)
+.++. ....++.. ......+.+ ++ .||+.+..+ ..+.+||.. +.+++.+..++.......++..
T Consensus 211 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s 285 (343)
T 1ri6_A 211 HGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQPRGFNVD 285 (343)
T ss_dssp TSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSSCCCEEEC
T ss_pred CCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCccceEEEC
Confidence 34432 22333322 112222333 33 677665432 578888887 5566666544332222223332
Q ss_pred -CC-EEEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCc
Q psy11771 283 -EG-YLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRR 321 (347)
Q Consensus 283 -~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r 321 (347)
++ .||+.++.++ .-.++..|+++.+++.+..++...
T Consensus 286 ~dg~~l~~~~~~~~---~v~v~~~d~~~g~~~~~~~~~~g~ 323 (343)
T 1ri6_A 286 HSGKYLIAAGQKSH---HISVYEIVGEQGLLHEKGRYAVGQ 323 (343)
T ss_dssp TTSSEEEEECTTTC---EEEEEEEETTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCCC---eEEEEEEcCCCceeeEccccccCC
Confidence 44 4666543221 123444488899999887765543
No 57
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.24 E-value=0.64 Score=42.26 Aligned_cols=147 Identities=16% Similarity=0.243 Sum_probs=76.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
++..++.|+.+ ..+..||..+.+-.. .+............++..++.|+.+ ..+..||..+.+-...
T Consensus 248 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~--~~~~~~~~v~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~- 314 (445)
T 2ovr_B 248 DGRRVVSGAYD-----FMVKVWDPETETCLH--TLQGHTNRVYSLQFDGIHVVSGSLD-----TSIRVWDVETGNCIHT- 314 (445)
T ss_dssp CSSCEEEEETT-----SCEEEEEGGGTEEEE--EECCCSSCEEEEEECSSEEEEEETT-----SCEEEEETTTCCEEEE-
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEeE--EecCCCCceEEEEECCCEEEEEeCC-----CeEEEEECCCCCEEEE-
Confidence 45555555543 346667766554221 1111112222333366556666543 4588889877653221
Q ss_pred CCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-cCCCCCCCcceEEEEECCEEEEEeccCCCCCccE
Q psy11771 222 SMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNS 300 (347)
Q Consensus 222 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~ 300 (347)
+............++..++.|+.+ ..+..||..+.+-.. +...........++.+++..++.|+.+ ..
T Consensus 315 -~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~ 383 (445)
T 2ovr_B 315 -LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDD-----GT 383 (445)
T ss_dssp -ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEEEEEETT-----SE
T ss_pred -EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEEEEEeCC-----Ce
Confidence 111111223334455566666654 478899987765322 222111222334455677777777754 36
Q ss_pred EEEEeCCCCcEE
Q psy11771 301 VEKYDPKLNKWQ 312 (347)
Q Consensus 301 v~~yd~~~~~W~ 312 (347)
+.+||..+.+..
T Consensus 384 v~iwd~~~~~~~ 395 (445)
T 2ovr_B 384 VKLWDLKTGEFI 395 (445)
T ss_dssp EEEEETTTCCEE
T ss_pred EEEEECCCCcee
Confidence 999999887654
No 58
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.22 E-value=0.44 Score=40.90 Aligned_cols=145 Identities=14% Similarity=0.161 Sum_probs=75.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+++.++.|+.++ .+.++|..+.+....-.-.. ..-.+++.. +++.++.|+.+ ..+..||..+.+-...
T Consensus 34 ~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~s~~~d-----~~i~vwd~~~~~~~~~ 102 (312)
T 4ery_A 34 NGEWLASSSADK-----LIKIWGAYDGKFEKTISGHK-LGISDVAWSSDSNLLVSASDD-----KTLKIWDVSSGKCLKT 102 (312)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEEECCCS-SCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEeeCCC-----eEEEEeCCCcccchhhccCC-CceEEEEEcCCCCEEEEECCC-----CEEEEEECCCCcEEEE
Confidence 566777777553 47788887776543211111 111122222 55666666643 5688899887653221
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q psy11771 221 PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSS 296 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~ 296 (347)
-.-... ....+.+ ++.+++.|+.+ ..+..||..+.+-... ++........+.+ ++++++.|+.++
T Consensus 103 ~~~~~~--~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~-- 171 (312)
T 4ery_A 103 LKGHSN--YVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG-- 171 (312)
T ss_dssp EECCSS--CEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred EcCCCC--CEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC--
Confidence 111111 1122222 45666777754 4688899887653221 1111112233333 566777777543
Q ss_pred CccEEEEEeCCCCcE
Q psy11771 297 SLNSVEKYDPKLNKW 311 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W 311 (347)
.+.+||..+.+-
T Consensus 172 ---~i~~wd~~~~~~ 183 (312)
T 4ery_A 172 ---LCRIWDTASGQC 183 (312)
T ss_dssp ---CEEEEETTTCCE
T ss_pred ---cEEEEECCCCce
Confidence 477888876654
No 59
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=95.22 E-value=0.97 Score=43.36 Aligned_cols=120 Identities=13% Similarity=0.163 Sum_probs=69.4
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeC-CCCc--EEeCCCCCC-----Cc---cceEEEE--ECCE----EEEEcCcCC
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDP-LTGV--WSSCPAMTT-----RR---RYCRIAV--VENC----LYALGGFDS 200 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~-~~~~--W~~~~~~~~-----~r---~~~~~~~--~~~~----lyv~GG~~~ 200 (347)
-++.++.||+.+.. ...++++|. .+.+ |+.-..... .+ ...+.+. .+++ ||+...
T Consensus 58 P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 58 PLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL--- 129 (599)
T ss_dssp CEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT---
T ss_pred cEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC---
Confidence 34569999998652 245899998 7764 876443321 11 1123344 5677 888643
Q ss_pred CCccceEEEEeCCCCc--EEecCCCCC-C-CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe--EEEcC
Q psy11771 201 TNYQASVERLDPRMGK--WAPVPSMSS-R-RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPIA 268 (347)
Q Consensus 201 ~~~~~~~~~yd~~~~~--W~~~~~~p~-~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 268 (347)
...++.+|..+.+ |+.-..-+. . ....+-++.++++|+..+.........++.||.++.+ |+.-.
T Consensus 130 ---dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ---DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ---TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred ---CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 2568999987764 875322111 1 1122334578888875432111123689999998764 87643
No 60
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.17 E-value=1.4 Score=38.09 Aligned_cols=149 Identities=9% Similarity=-0.040 Sum_probs=81.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC-CCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA-MTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.+|+.+... ...++++|+.+.+-...-+ ....-...+...-++.+|+... ...+..||+.+.+-...
T Consensus 152 g~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 152 TNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSR 221 (353)
T ss_dssp TTEEEEEEESS----SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEE
T ss_pred CCEEEEEecCC----CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEE
Confidence 45677776321 2569999998876433222 1111122222222456777654 25788999988764322
Q ss_pred CCC-C--CCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEeccC
Q psy11771 221 PSM-S--SRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-E-GYLLTMGGND 293 (347)
Q Consensus 221 ~~~-p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~ 293 (347)
-+. . ......+++.. ++.+|+.+.. ...+.+||+.+.+....-+.+.+ ..++.. + +.+|+.+..+
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~~~~~~~---~~~~~s~dg~~l~v~~~~~ 293 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSK-----AAEVLVVDTRNGNILAKVAAPES---LAVLFNPARNEAYVTHRQA 293 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESS-----SSEEEEEETTTCCEEEEEECSSC---CCEEEETTTTEEEEEETTT
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCC---ceEEECCCCCEEEEEECCC
Confidence 221 1 11112223333 4567776532 26899999988765443333333 123333 4 4588876432
Q ss_pred CCCCccEEEEEeCCCCcEEE
Q psy11771 294 GSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~W~~ 313 (347)
+.+.+||+.+.+...
T Consensus 294 -----~~v~~~d~~~~~~~~ 308 (353)
T 3vgz_A 294 -----GKVSVIDAKSYKVVK 308 (353)
T ss_dssp -----TEEEEEETTTTEEEE
T ss_pred -----CeEEEEECCCCeEEE
Confidence 479999998876543
No 61
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=95.16 E-value=0.57 Score=40.22 Aligned_cols=148 Identities=16% Similarity=0.141 Sum_probs=77.6
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+++.+++|+.+ ..+.+||..+.+......+....... +++.. +++.++.|+.+ ..+..||..+.+...
T Consensus 108 ~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~ 177 (337)
T 1gxr_A 108 DGCTLIVGGEA-----STLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVR 177 (337)
T ss_dssp TSSEEEEEESS-----SEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceee
Confidence 55666666644 46888998887644333222222222 22222 55566666543 458899998775433
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCCCC
Q psy11771 220 VPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGSSS 297 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~ 297 (347)
.-...... ..+++.. ++..++.|+.+ ..+..||..+.+-...-..+. ....++.. +++.+++|+.++
T Consensus 178 ~~~~~~~~-i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~--~v~~~~~s~~~~~l~~~~~~~--- 246 (337)
T 1gxr_A 178 QFQGHTDG-ASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQHDFTS--QIFSLGYCPTGEWLAVGMESS--- 246 (337)
T ss_dssp EECCCSSC-EEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEECTTSSEEEEEETTS---
T ss_pred eeecccCc-eEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeeecCCC--ceEEEEECCCCCEEEEEcCCC---
Confidence 22211111 1222222 56666666653 578899998775433222211 11222222 566777776533
Q ss_pred ccEEEEEeCCCCcEE
Q psy11771 298 LNSVEKYDPKLNKWQ 312 (347)
Q Consensus 298 ~~~v~~yd~~~~~W~ 312 (347)
.+.+||..+.+-.
T Consensus 247 --~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 247 --NVEVLHVNKPDKY 259 (337)
T ss_dssp --CEEEEETTSSCEE
T ss_pred --cEEEEECCCCCeE
Confidence 5888888776533
No 62
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=95.14 E-value=0.71 Score=39.54 Aligned_cols=145 Identities=17% Similarity=0.219 Sum_probs=74.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++++++.|+.+ ..+.+||..+.+-... +....... +++. .++..++.|+.+ ..+..||..+.+-..
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 143 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKT--LKGHSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGKCLK 143 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCCEEE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCEEEE
Confidence 55677777754 4588888877653221 11111111 1222 245566666644 458889988765322
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
. ++........+.+ ++.+++.|+.+ ..+..||..+.+-...-..... .....+.+ +++.++.|+.+
T Consensus 144 ~--~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d-- 213 (312)
T 4ery_A 144 T--LPAHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLD-- 213 (312)
T ss_dssp E--ECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETT--
T ss_pred E--ecCCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEEEcCC--
Confidence 1 1111111222222 56677777764 4688899887654322111111 11222333 56666666643
Q ss_pred CCccEEEEEeCCCCcE
Q psy11771 296 SSLNSVEKYDPKLNKW 311 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W 311 (347)
..+.+||..+.+-
T Consensus 214 ---~~i~iwd~~~~~~ 226 (312)
T 4ery_A 214 ---NTLKLWDYSKGKC 226 (312)
T ss_dssp ---TEEEEEETTTTEE
T ss_pred ---CeEEEEECCCCcE
Confidence 3688888877653
No 63
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=95.13 E-value=1.6 Score=38.93 Aligned_cols=145 Identities=10% Similarity=0.077 Sum_probs=82.8
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCC---------cEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccce
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTG---------VWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQAS 206 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~---------~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~ 206 (347)
+++..++++|+|=| ..+|+++.... .|. .+|. ....+... .++++|+|-| +.
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wp---gLP~-~iDAa~~~~~~g~~~fFkg-------~~ 246 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWP---TLPS-GIEAAYEIEARNQVFLFKD-------DK 246 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCS---SCCS-SCCEEEEEGGGTEEEEEET-------TE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhcc---CCCC-CccEEEEecCCCEEEEEeC-------CE
Confidence 34557999999977 45677654432 132 3332 12222222 2789999987 66
Q ss_pred EEEEeCCCCc--E-EecCC--CCCCC-cceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCC------CC-
Q psy11771 207 VERLDPRMGK--W-APVPS--MSSRR-SSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAP------ML- 271 (347)
Q Consensus 207 ~~~yd~~~~~--W-~~~~~--~p~~r-~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~------~~- 271 (347)
.|+|+..... + ..+.. +|... .--++... ++++|++-| +..|+||..+.+-..--+ .|
T Consensus 247 yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~~f~g 319 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITKNFQG 319 (365)
T ss_dssp EEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHHHSTT
T ss_pred EEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhhcCCC
Confidence 7888754321 1 12322 34321 11233333 589999977 688999987764322101 11
Q ss_pred CCCcceEEEEE-CCEEEEEeccCCCCCccEEEEEeCCCCcEEE
Q psy11771 272 SRRSTHEVVNI-EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 272 ~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 313 (347)
.+...-++... ++++|.|-| +..|.||..+.+-..
T Consensus 320 ~p~~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 320 IGPKIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp CCSSCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred CCCccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 12222344445 899999988 478999988876543
No 64
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.12 E-value=1.3 Score=37.32 Aligned_cols=148 Identities=12% Similarity=0.116 Sum_probs=81.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.||+.... ...+.+||+. .+..............+++.. ++.+|+.... ...+.+||+. .++...
T Consensus 30 ~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~ 97 (300)
T 2qc5_A 30 DGKVWFTQHK-----ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEY 97 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEcCC-----CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEe
Confidence 5788887532 2568899988 666543211111222333332 5788887532 2568899988 666544
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcc-eEEEEE-CCEEEEEeccCCCCC
Q psy11771 221 PSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRST-HEVVNI-EGYLLTMGGNDGSSS 297 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~-~~~~~~-~~~lyv~GG~~~~~~ 297 (347)
..........+++.- ++.+|+....+ ..+.+||+. .+..... ++..... .+++.- +++||+....
T Consensus 98 ~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~----- 165 (300)
T 2qc5_A 98 PLPQPDSGPYGITEGLNGDIWFTQLNG-----DRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ----- 165 (300)
T ss_dssp ECSSTTCCEEEEEECSTTCEEEEETTT-----TEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT-----
T ss_pred cCCCCCCCCccceECCCCCEEEEccCC-----CeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC-----
Confidence 321122223344433 67898875322 478899987 5555432 2211122 233332 5778886532
Q ss_pred ccEEEEEeCCCCcEEEc
Q psy11771 298 LNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 298 ~~~v~~yd~~~~~W~~~ 314 (347)
...+++||+ +.+...+
T Consensus 166 ~~~i~~~~~-~g~~~~~ 181 (300)
T 2qc5_A 166 NNSIGRITN-TGKLEEY 181 (300)
T ss_dssp TTEEEEECT-TCCEEEE
T ss_pred CCeEEEECC-CCcEEEe
Confidence 236888988 6666654
No 65
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=95.11 E-value=0.12 Score=42.90 Aligned_cols=140 Identities=10% Similarity=0.041 Sum_probs=77.3
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCC---------------CCcEEeCCCCC--CCccceEEEEECCEEEEEcCcCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPL---------------TGVWSSCPAMT--TRRRYCRIAVVENCLYALGGFDSTNY 203 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~---------------~~~W~~~~~~~--~~r~~~~~~~~~~~lyv~GG~~~~~~ 203 (347)
.++.+|+|-| ..+|+++.. +..|..++... ......+....++++|+|-|
T Consensus 14 ~~ge~yfFkg-------~~~wr~~~~~~~~~~~~~~~P~~I~~~W~~Lp~~~f~p~~iDaaf~~~~g~~~fFKg------ 80 (227)
T 3lp9_A 14 KNNEAYFFIN-------DKYVLLDYAPGSSRDKVLYGPTPVRDGFKSLNQTIFGSYGIDCSFDTENNEAFIFYE------ 80 (227)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHSGGGTTSHHHHHCCSEEEECSTTEEEEEET------
T ss_pred CCCeEEEEEC-------CEEEEEeCCCCCccccccCCceEHhhcCCcCCcccCCCCCceEEEECCCCEEEEEeC------
Confidence 3689999977 456666652 12254443221 11222222246899999988
Q ss_pred cceEEEEe--CCC-------------CcEEecCC--CCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEE
Q psy11771 204 QASVERLD--PRM-------------GKWAPVPS--MSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWE 265 (347)
Q Consensus 204 ~~~~~~yd--~~~-------------~~W~~~~~--~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 265 (347)
+.+|+|+ +.+ ..|.-++. +|. ....+... .++++|++-| +..|+||..+++-.
T Consensus 81 -~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~-~IDAA~~~~~~~k~yfFkG-------~~yw~~d~~~~~~~ 151 (227)
T 3lp9_A 81 -NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFES-GIDAAYRSTRGKEVYLFKG-------DQYARIDYGSNSMV 151 (227)
T ss_dssp -TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTT-CCSEEEECSSTTEEEEEET-------TEEEEEETTTTEES
T ss_pred -CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCC-cccEEEEECCCCEEEEEEC-------CEEEEEeCCCcccc
Confidence 6688888 321 11222221 122 22222222 2689999988 68999998765421
Q ss_pred E-----cC-CCCCC------CcceEEEE--ECCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 266 P-----IA-PMLSR------RSTHEVVN--IEGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 266 ~-----~~-~~~~~------~~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
. +. .+|.. ..--+++. .++++|+|-| +..|.||..+.
T Consensus 152 ~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 152 NKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp SSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred CCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 1 11 12211 12223333 2589999988 47889998776
No 66
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.07 E-value=0.97 Score=40.92 Aligned_cols=144 Identities=8% Similarity=0.041 Sum_probs=79.8
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCE-EEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENC-LYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA- 234 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~- 234 (347)
..++.+|..+.+...+...... ..+.+. -+++ |++.+..++ ...++.+|..+.+-..+... .......+.
T Consensus 247 ~~i~~~d~~~~~~~~l~~~~~~--~~~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~~~~~~l~~~--~~~~~~~~~s 319 (415)
T 2hqs_A 247 LNLYVMDLASGQIRQVTDGRSN--NTEPTWFPDSQNLAFTSDQAG---RPQVYKVNINGGAPQRITWE--GSQNQDADVS 319 (415)
T ss_dssp CEEEEEETTTCCEEECCCCSSC--EEEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCCEECCCS--SSEEEEEEEC
T ss_pred ceEEEEECCCCCEEeCcCCCCc--ccceEECCCCCEEEEEECCCC---CcEEEEEECCCCCEEEEecC--CCcccCeEEC
Confidence 4699999998887666543321 112222 2454 444432221 24789999988765444321 111122222
Q ss_pred ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 235 LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 235 ~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
-+++..++++.... ...++.+|+.+.+...+..-. ....+.+ +++.+++++.++. ...++.+|...+...
T Consensus 320 pdG~~l~~~~~~~g--~~~i~~~d~~~~~~~~l~~~~----~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~~g~~~~ 391 (415)
T 2hqs_A 320 SDGKFMVMVSSNGG--QQHIAKQDLATGGVQVLSSTF----LDETPSLAPNGTMVIYSSSQGM--GSVLNLVSTDGRFKA 391 (415)
T ss_dssp TTSSEEEEEEECSS--CEEEEEEETTTCCEEECCCSS----SCEEEEECTTSSEEEEEEEETT--EEEEEEEETTSCCEE
T ss_pred CCCCEEEEEECcCC--ceEEEEEECCCCCEEEecCCC----CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEECCCCcEE
Confidence 25554444443221 257999999998887665432 2223333 6666666654332 347999999888777
Q ss_pred EccC
Q psy11771 313 LLTP 316 (347)
Q Consensus 313 ~~~~ 316 (347)
.++.
T Consensus 392 ~l~~ 395 (415)
T 2hqs_A 392 RLPA 395 (415)
T ss_dssp ECCC
T ss_pred EeeC
Confidence 6643
No 67
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=95.00 E-value=0.71 Score=41.84 Aligned_cols=158 Identities=14% Similarity=0.106 Sum_probs=86.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+++.+++++.+.. ...++++|..+.+...+...+.. ..+.+.. ++ .|++.+..++ ...++.+|..+.+...
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~~~~--~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~ 261 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASFPRH--NGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQ 261 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECCSSC--EEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEE
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecCCCc--ccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEe
Confidence 5555555554321 25799999998887665443321 1222222 44 4655554322 3579999999888766
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
+...+.. .....+ +++..++++.... ...++.+|..+.+-..+... . .....+.+ +++.+++++..+.
T Consensus 262 l~~~~~~---~~~~~~spdg~~l~~~s~~~g--~~~i~~~d~~~~~~~~l~~~--~-~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 262 VTDGRSN---NTEPTWFPDSQNLAFTSDQAG--RPQVYKVNINGGAPQRITWE--G-SQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp CCCCSSC---EEEEEECTTSSEEEEEECTTS--SCEEEEEETTSSCCEECCCS--S-SEEEEEEECTTSSEEEEEEECSS
T ss_pred CcCCCCc---ccceEECCCCCEEEEEECCCC--CcEEEEEECCCCCEEEEecC--C-CcccCeEECCCCCEEEEEECcCC
Confidence 6543321 222233 5553333332111 25799999988765444321 1 12222333 5665555543321
Q ss_pred CCccEEEEEeCCCCcEEEccC
Q psy11771 296 SSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~~~ 316 (347)
...++.+|+.+.+...+..
T Consensus 334 --~~~i~~~d~~~~~~~~l~~ 352 (415)
T 2hqs_A 334 --QQHIAKQDLATGGVQVLSS 352 (415)
T ss_dssp --CEEEEEEETTTCCEEECCC
T ss_pred --ceEEEEEECCCCCEEEecC
Confidence 3579999999988876653
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.98 E-value=0.044 Score=48.68 Aligned_cols=148 Identities=11% Similarity=0.115 Sum_probs=73.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc-EE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK-WA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~ 218 (347)
++++++.|+.+ ..+.+||..++.|+....+............ +++.++.|+.+ ..+..||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 56667777654 3577788888888777666543333333332 45666666643 458888887766 43
Q ss_pred ecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCe-EEEcCCCCC-CCcceEEEEE--CCEEEEEecc
Q psy11771 219 PVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNS-WEPIAPMLS-RRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~~~-~~~~~~~~~~--~~~lyv~GG~ 292 (347)
....+.........+.+ ++.+++.|+.+ ..+..||..+.+ |.....+.. .......+.+ ++++++.|+.
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~ 166 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCA 166 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEES
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeC
Confidence 33222222222222332 56666666654 457778877654 322222222 1122223333 5677777775
Q ss_pred CCCCCccEEEEEeCCCC
Q psy11771 293 DGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~ 309 (347)
++ .+.+||..+.
T Consensus 167 d~-----~i~iwd~~~~ 178 (377)
T 3dwl_C 167 DR-----KAYVLSAYVR 178 (377)
T ss_dssp SS-----CEEEEEECCS
T ss_pred CC-----EEEEEEEEec
Confidence 43 4778886543
No 69
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=94.98 E-value=1.4 Score=37.04 Aligned_cols=150 Identities=9% Similarity=0.047 Sum_probs=82.2
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
.++.+|+.... ...+.+||+. +.+...........-.+++. -++.+|+.... ...+.+||+. .+...
T Consensus 24 ~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~ 91 (299)
T 2z2n_A 24 DKGKVWITQHK-----ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA-----ANKIGRITKK-GIIKE 91 (299)
T ss_dssp TTSCEEEEETT-----TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEE
T ss_pred CCCCEEEEecC-----CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEE
Confidence 36788886431 2468999988 66655432111222233333 26788887532 2468889986 44544
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCCCC
Q psy11771 220 VPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGSSS 297 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~ 297 (347)
...........+++.- ++.+|+..... ..+.+||+ +.+..............+++.- ++++|+....
T Consensus 92 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~-----~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~----- 160 (299)
T 2z2n_A 92 YTLPNPDSAPYGITEGPNGDIWFTEMNG-----NRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQ----- 160 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTT-----TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETT-----
T ss_pred EeCCCcCCCceeeEECCCCCEEEEecCC-----ceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCC-----
Confidence 4311122222334433 57899875431 57889998 5555544221111222333333 5788886532
Q ss_pred ccEEEEEeCCCCcEEEc
Q psy11771 298 LNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 298 ~~~v~~yd~~~~~W~~~ 314 (347)
...+.+||+ +.+...+
T Consensus 161 ~~~i~~~~~-~g~~~~~ 176 (299)
T 2z2n_A 161 NNAIGRITE-SGDITEF 176 (299)
T ss_dssp TTEEEEECT-TCCEEEE
T ss_pred CCEEEEEcC-CCcEEEe
Confidence 246889998 7776654
No 70
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.97 E-value=0.22 Score=45.28 Aligned_cols=105 Identities=12% Similarity=0.150 Sum_probs=53.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEe-cCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAP-VPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
++..++.|+.+ ..+..||..+..-.. ...+.........+..++...+.|+.+ ..+..||..+.+-...
T Consensus 222 ~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~ 291 (435)
T 1p22_A 222 NNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD-----RTIKVWNTSTCEFVRT 291 (435)
T ss_dssp CTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred cCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC-----CeEEEEECCcCcEEEE
Confidence 33444555433 457777876543111 011111111223333466666666654 5788899887643221
Q ss_pred CCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 268 APMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+........++..++.+++.|+.++ .+.+||..+.+
T Consensus 292 --~~~~~~~v~~~~~~~~~l~~g~~dg-----~i~iwd~~~~~ 327 (435)
T 1p22_A 292 --LNGHKRGIACLQYRDRLVVSGSSDN-----TIRLWDIECGA 327 (435)
T ss_dssp --EECCSSCEEEEEEETTEEEEEETTS-----CEEEEETTTCC
T ss_pred --EcCCCCcEEEEEeCCCEEEEEeCCC-----eEEEEECCCCC
Confidence 1111222334455667777777543 58888887654
No 71
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.95 E-value=0.51 Score=42.50 Aligned_cols=156 Identities=11% Similarity=-0.009 Sum_probs=78.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcCCCC--ccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFDSTN--YQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~--~~~~~~~yd~~~~~W 217 (347)
++.+|+.++.+ ..+.+||+.+.+....-.. ...-.+++.. ++ .+++.+...... ....+..||+.+.+-
T Consensus 223 ~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~ 295 (433)
T 3bws_A 223 RDLVYCSNWIS-----EDISVIDRKTKLEIRKTDK--IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKL 295 (433)
T ss_dssp TTEEEEEETTT-----TEEEEEETTTTEEEEECCC--CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEE
T ss_pred CCEEEEEecCC-----CcEEEEECCCCcEEEEecC--CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcE
Confidence 45677766533 4689999988765432222 1122223332 44 555544222111 235788999987754
Q ss_pred EecCCCCCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEeccC
Q psy11771 218 APVPSMSSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGY-LLTMGGND 293 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~ 293 (347)
......+. ....++.. ++ .+|+.++.+ ..+..||..+.+-...- +.......++.. +++ ||+.+...
T Consensus 296 ~~~~~~~~--~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~ 366 (433)
T 3bws_A 296 IDTIGPPG--NKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSI--PVFDKPNTIALSPDGKYLYVSCRGP 366 (433)
T ss_dssp EEEEEEEE--CEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEE--ECSSSEEEEEECTTSSEEEEEECCC
T ss_pred EeeccCCC--CcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEe--cCCCCCCeEEEcCCCCEEEEEecCC
Confidence 33221111 11122222 33 688886653 57899999876543322 222122233333 454 55544321
Q ss_pred CC---------CCccEEEEEeCCCCcEEE
Q psy11771 294 GS---------SSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 294 ~~---------~~~~~v~~yd~~~~~W~~ 313 (347)
+. ..-..+++||..+.+...
T Consensus 367 ~~~~~~~~~~g~~dg~v~~~d~~~~~~~~ 395 (433)
T 3bws_A 367 NHPTEGYLKKGLVLGKVYVIDTTTDTVKE 395 (433)
T ss_dssp CCTTTCTTSCCSSCCEEEEEETTTTEEEE
T ss_pred CccccccccccccceEEEEEECCCCcEEE
Confidence 10 012379999998876544
No 72
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=94.93 E-value=0.81 Score=38.78 Aligned_cols=148 Identities=11% Similarity=0.134 Sum_probs=73.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
++..++.|+.+ ..+..||.... -.................-++. ++.|+.+ ..+..||..+.+-...-
T Consensus 154 ~~~~l~~~~~d-----~~i~i~d~~~~-~~~~~~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 154 SENKFLTASAD-----KTIKLWQNDKV-IKTFSGIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp TTTEEEEEETT-----SCEEEEETTEE-EEEECSSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEEE
T ss_pred CCCEEEEEECC-----CCEEEEecCce-EEEEeccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhhh
Confidence 56666666654 34777773221 1222221122222222234667 5566543 46888998765432211
Q ss_pred CCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCc
Q psy11771 222 SMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSL 298 (347)
Q Consensus 222 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~ 298 (347)
..... .-.+++.. +++ ++.|+.+ ..+..||..+.+....-..+.. ....+.+ +++ ++.|+.+
T Consensus 222 ~~~~~-~i~~~~~~~~~~-l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~--~i~~~~~~~~~~-~~~~~~d----- 286 (313)
T 3odt_A 222 EGHES-FVYCIKLLPNGD-IVSCGED-----RTVRIWSKENGSLKQVITLPAI--SIWSVDCMSNGD-IIVGSSD----- 286 (313)
T ss_dssp ECCSS-CEEEEEECTTSC-EEEEETT-----SEEEEECTTTCCEEEEEECSSS--CEEEEEECTTSC-EEEEETT-----
T ss_pred hcCCc-eEEEEEEecCCC-EEEEecC-----CEEEEEECCCCceeEEEeccCc--eEEEEEEccCCC-EEEEeCC-----
Confidence 11111 12233332 444 4555543 5788999888764433222222 1222333 566 5556654
Q ss_pred cEEEEEeCCCCcEEEccC
Q psy11771 299 NSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 299 ~~v~~yd~~~~~W~~~~~ 316 (347)
..+.+||..++++.....
T Consensus 287 g~i~iw~~~~~~~~~~~~ 304 (313)
T 3odt_A 287 NLVRIFSQEKSRWASEDE 304 (313)
T ss_dssp SCEEEEESCGGGCCC---
T ss_pred CcEEEEeCCCCceeehhh
Confidence 359999999888765544
No 73
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.93 E-value=0.63 Score=45.47 Aligned_cols=119 Identities=22% Similarity=0.315 Sum_probs=73.3
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCC--------CcceEEEEECCEEEEEcccCCCccCCe
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSR--------RSSCGVAALDGAIYCVGGNDGTMCMSS 253 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 253 (347)
+-+..++.||+... ...++.+|..+. .|+.-...+.. ....+.++.+++||+.... ..
T Consensus 65 ~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d------g~ 132 (689)
T 1yiq_A 65 TPIVVDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD------GR 132 (689)
T ss_dssp CCEEETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------SE
T ss_pred cCEEECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC------CE
Confidence 34567999999764 256899998765 48875443211 1122345678999886532 57
Q ss_pred EEEEECCCC--eEEEcCC-CCC--CCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 254 GERFNVRRN--SWEPIAP-MLS--RRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 254 v~~yd~~~~--~W~~~~~-~~~--~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
++.+|.++. .|+.-.. -+. .....+-++.++++|+-.+.........+++||.++.+ |+.-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 899999876 4876543 111 11122335568998874332211234579999998876 8754
No 74
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=94.92 E-value=0.44 Score=41.34 Aligned_cols=154 Identities=10% Similarity=0.028 Sum_probs=82.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
.+++||+.+..+ ..+++||+.+++........ ...-.+++.. ++++|+...... .....+++||+.+.....
T Consensus 54 ~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~ 126 (333)
T 2dg1_A 54 RQGQLFLLDVFE-----GNIFKINPETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQD 126 (333)
T ss_dssp TTSCEEEEETTT-----CEEEEECTTTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEE
T ss_pred CCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEE
Confidence 367788876532 46999999988876543111 1222333332 678888753221 112578999998877553
Q ss_pred -cCCCCCCCcceEEEE-ECCEEEEEcccC-CCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEeccCC
Q psy11771 220 -VPSMSSRRSSCGVAA-LDGAIYCVGGND-GTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGNDG 294 (347)
Q Consensus 220 -~~~~p~~r~~~~~~~-~~~~iyv~GG~~-~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~ 294 (347)
+...........++. -++.+|+..... .......++++|+.+.+...+..- .....+++.. ++ .||+....
T Consensus 127 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~dg~~l~v~~~~-- 202 (333)
T 2dg1_A 127 IIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--ISVANGIALSTDEKVLWVTETT-- 202 (333)
T ss_dssp EECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--ESSEEEEEECTTSSEEEEEEGG--
T ss_pred EEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--CCcccceEECCCCCEEEEEeCC--
Confidence 232222222223333 267888865321 111235789999887666554210 0111222222 34 57776532
Q ss_pred CCCccEEEEEeCCC
Q psy11771 295 SSSLNSVEKYDPKL 308 (347)
Q Consensus 295 ~~~~~~v~~yd~~~ 308 (347)
.+.+++||+.+
T Consensus 203 ---~~~i~~~d~~~ 213 (333)
T 2dg1_A 203 ---ANRLHRIALED 213 (333)
T ss_dssp ---GTEEEEEEECT
T ss_pred ---CCeEEEEEecC
Confidence 23678888753
No 75
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.84 E-value=1.8 Score=37.46 Aligned_cols=153 Identities=13% Similarity=0.041 Sum_probs=78.8
Q ss_pred CCEEEEEcccCC-CCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDG-ASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++.+|+...... ......++++|+.+.+....-+.... ..+++.. ++.+|+.++.. ..+..||+.+.+-.
T Consensus 52 g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~ 124 (353)
T 3vgz_A 52 ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--PFGATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVK 124 (353)
T ss_dssp TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--CCSEEEETTTTEEEEEETTT-----TEEEEEETTTCCEE
T ss_pred CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--cceEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeE
Confidence 457877653211 01135699999988764322111111 2223332 34688876532 57899999887643
Q ss_pred ecCCCCCC--------CcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-C-CEE
Q psy11771 219 PVPSMSSR--------RSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-E-GYL 286 (347)
Q Consensus 219 ~~~~~p~~--------r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~l 286 (347)
..-+.+.. .....++.. ++.+|+.+... ...++.||+.+.+-...-+.. ......++.. + +.|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQNT-GKMSTGLALDSEGKRL 199 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEECCC-CTTCCCCEEETTTTEE
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEecCC-CCccceEEECCCCCEE
Confidence 22111111 111233332 35677776321 157999999887643322211 1111222333 3 456
Q ss_pred EEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 287 LTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 287 yv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
|+... .+.+.+||+.+.+-.
T Consensus 200 ~~~~~------~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 200 YTTNA------DGELITIDTADNKIL 219 (353)
T ss_dssp EEECT------TSEEEEEETTTTEEE
T ss_pred EEEcC------CCeEEEEECCCCeEE
Confidence 66543 247889998877543
No 76
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.83 E-value=0.87 Score=41.46 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=81.4
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
..++..++.|+.+ ..+.+||..+.+-...-..... .-.+++.. ++..++.|+.+ ..+..||..+.+-.
T Consensus 277 ~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~-~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~ 345 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTD-RIYSTIYDHERKRCISASMD-----TTIRIWDLENGELM 345 (464)
T ss_dssp EEETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCC-CEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEE
Confidence 4455666777754 3588899887653221111111 11222222 45555666643 45889998876532
Q ss_pred ecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCc
Q psy11771 219 PVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSL 298 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~ 298 (347)
. .+...........+++..++.|+.+ ..+..||..+..-..... ........+...++++++.|+ +
T Consensus 346 ~--~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-d----- 411 (464)
T 3v7d_B 346 Y--TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDNILVSGS-E----- 411 (464)
T ss_dssp E--EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSSEEEEEE-T-----
T ss_pred E--EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCceeeeec-CCCCccEEEEEeCCCEEEEec-C-----
Confidence 2 2221222234445566677777654 478899998764222211 111222233445777777776 2
Q ss_pred cEEEEEeCCCCcEEE
Q psy11771 299 NSVEKYDPKLNKWQL 313 (347)
Q Consensus 299 ~~v~~yd~~~~~W~~ 313 (347)
..+.+||.++.+-..
T Consensus 412 g~i~iwd~~~g~~~~ 426 (464)
T 3v7d_B 412 NQFNIYNLRSGKLVH 426 (464)
T ss_dssp TEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEe
Confidence 379999999886543
No 77
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.83 E-value=0.72 Score=40.05 Aligned_cols=145 Identities=14% Similarity=0.119 Sum_probs=75.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe-
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP- 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~- 219 (347)
+++.++.|+.+ ..+.+||..+.+-...-... ...-.+++. .+++.++.|+.+ ..+..||..+.+-..
T Consensus 133 dg~~l~~g~~d-----g~v~i~~~~~~~~~~~~~~~-~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~ 201 (321)
T 3ow8_A 133 DSQYLATGTHV-----GKVNIFGVESGKKEYSLDTR-GKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHT 201 (321)
T ss_dssp TSSEEEEECTT-----SEEEEEETTTCSEEEEEECS-SSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCceeEEecCC-CceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEE
Confidence 45566666543 35777887765432110111 111112222 256666666644 458889988765322
Q ss_pred cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q psy11771 220 VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSS 296 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~ 296 (347)
+..-..+ -.+++. -++.+++.|+.+ ..+..||..+.+.... +.........+.+ +++.++.|+.++
T Consensus 202 ~~~h~~~--v~~l~~spd~~~l~s~s~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~-- 270 (321)
T 3ow8_A 202 LEGHAMP--IRSLTFSPDSQLLVTASDD-----GYIKIYDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK-- 270 (321)
T ss_dssp ECCCSSC--CCEEEECTTSCEEEEECTT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--
T ss_pred EcccCCc--eeEEEEcCCCCEEEEEcCC-----CeEEEEECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC--
Confidence 2211111 112222 366777777764 4688899887654322 1111112223333 567777777543
Q ss_pred CccEEEEEeCCCCcE
Q psy11771 297 SLNSVEKYDPKLNKW 311 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W 311 (347)
.+.+||..+.+-
T Consensus 271 ---~v~iwd~~~~~~ 282 (321)
T 3ow8_A 271 ---SVKVWDVGTRTC 282 (321)
T ss_dssp ---CEEEEETTTTEE
T ss_pred ---cEEEEeCCCCEE
Confidence 588999877653
No 78
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=94.82 E-value=0.5 Score=40.59 Aligned_cols=147 Identities=14% Similarity=0.161 Sum_probs=75.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCC---CCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPA---MTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~---~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
++++++.|+ + ..+.+||..+..... ... ......-.+++.. +++.++.|+.+ ..+..||..+.+
T Consensus 62 ~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~~d~~~~~ 130 (337)
T 1gxr_A 62 PTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-----STLSIWDLAAPT 130 (337)
T ss_dssp SSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-----SEEEEEECCCC-
T ss_pred CCcEEEEcC-C-----CeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-----CcEEEEECCCCC
Confidence 556666665 3 468888887654211 111 1111111222222 45556666533 568899998877
Q ss_pred EEecCCCCCCCcc-eEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecc
Q psy11771 217 WAPVPSMSSRRSS-CGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 217 W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~ 292 (347)
......+...... .+++.. ++..+++|+.+ ..+..||..+.+....-... ......+.+ +++.++.|+.
T Consensus 131 ~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~l~~~~~ 203 (337)
T 1gxr_A 131 PRIKAELTSSAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQTLVRQFQGH--TDGASCIDISNDGTKLWTGGL 203 (337)
T ss_dssp -EEEEEEECSSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEET
T ss_pred cceeeecccCCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCceeeeeecc--cCceEEEEECCCCCEEEEEec
Confidence 5443332222222 222222 56666667654 46889999887643322211 112233333 5666667764
Q ss_pred CCCCCccEEEEEeCCCCcE
Q psy11771 293 DGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~W 311 (347)
+ ..+.+||..+.+-
T Consensus 204 d-----g~i~~~d~~~~~~ 217 (337)
T 1gxr_A 204 D-----NTVRSWDLREGRQ 217 (337)
T ss_dssp T-----SEEEEEETTTTEE
T ss_pred C-----CcEEEEECCCCce
Confidence 3 3688898877654
No 79
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.81 E-value=0.48 Score=43.03 Aligned_cols=150 Identities=11% Similarity=0.152 Sum_probs=82.6
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
....++..++.|+.+ ..+.+||..+.+-... +........+...++.+++.|+.+ ..+..||..+.+-
T Consensus 138 ~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~~~~~l~sg~~d-----g~i~vwd~~~~~~ 205 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRI--LTGHTGSVLCLQYDERVIITGSSD-----STVRVWDVNTGEM 205 (435)
T ss_dssp EEECCSSEEEEEESS-----SCEEEEESSSCCEEEE--ECCCSSCEEEEECCSSEEEEEETT-----SCEEEEESSSCCE
T ss_pred EEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEE--EcCCCCcEEEEEECCCEEEEEcCC-----CeEEEEECCCCcE
Confidence 344477888888865 3588889877654322 111222223334477777777754 4588899887754
Q ss_pred EecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEc-CCCCCCCcceEEEEECCEEEEEeccCCCC
Q psy11771 218 APVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI-APMLSRRSTHEVVNIEGYLLTMGGNDGSS 296 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~ 296 (347)
... +.........+.+++..++.|+.+ ..+..||..+..-... ..+........++..++..++.|+.+
T Consensus 206 ~~~--~~~h~~~v~~l~~~~~~l~s~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~d--- 275 (435)
T 1p22_A 206 LNT--LIHHCEAVLHLRFNNGMMVTCSKD-----RSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGD--- 275 (435)
T ss_dssp EEE--ECCCCSCEEEEECCTTEEEEEETT-----SCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETT---
T ss_pred EEE--EcCCCCcEEEEEEcCCEEEEeeCC-----CcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCC---
Confidence 322 111122233344455666777654 4688888876542110 11111112233444466666777653
Q ss_pred CccEEEEEeCCCCcE
Q psy11771 297 SLNSVEKYDPKLNKW 311 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W 311 (347)
..+.+||..+.+-
T Consensus 276 --g~i~vwd~~~~~~ 288 (435)
T 1p22_A 276 --RTIKVWNTSTCEF 288 (435)
T ss_dssp --SEEEEEETTTCCE
T ss_pred --CeEEEEECCcCcE
Confidence 3688899877643
No 80
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.80 E-value=0.92 Score=44.88 Aligned_cols=148 Identities=9% Similarity=0.022 Sum_probs=85.7
Q ss_pred CeEEEEeCCCCcEEeCCCCC---CCccc-eEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCC---CCCCCcc
Q psy11771 158 SSMERYDPLTGVWSSCPAMT---TRRRY-CRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAPVPS---MSSRRSS 229 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~---~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~ 229 (347)
.-+++||+.+++|....... ..... .+++. .++.||+... . .-+++||+.+++++.... ++....
T Consensus 469 ~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-----~Gl~~~~~~~~~~~~~~~~~~l~~~~i- 541 (781)
T 3v9f_A 469 AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF-G-----GGVGIYTPDMQLVRKFNQYEGFCSNTI- 541 (781)
T ss_dssp TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES-S-----SCEEEECTTCCEEEEECTTTTCSCSCE-
T ss_pred CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc-C-----CCEEEEeCCCCeEEEccCCCCCCCCee-
Confidence 35889999988886553222 11111 12222 2567887531 1 348899999998887653 322221
Q ss_pred eEEEE-ECCEEEEEcccCCCccCCeE-EEEECCCCeEEEcC---CCCCCCcceEEEEE-CCEEEEEeccCCCCCccEEEE
Q psy11771 230 CGVAA-LDGAIYCVGGNDGTMCMSSG-ERFNVRRNSWEPIA---PMLSRRSTHEVVNI-EGYLLTMGGNDGSSSLNSVEK 303 (347)
Q Consensus 230 ~~~~~-~~~~iyv~GG~~~~~~~~~v-~~yd~~~~~W~~~~---~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~ 303 (347)
.++.. -++.|++... .-+ .+||+.++++.... .++.... .+++.- +|.|++.+. +.+.+
T Consensus 542 ~~i~~d~~g~lWi~T~-------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~-------~Gl~~ 606 (781)
T 3v9f_A 542 NQIYRSSKGQMWLATG-------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN-------TGISC 606 (781)
T ss_dssp EEEEECTTSCEEEEET-------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS-------SCEEE
T ss_pred EEEEECCCCCEEEEEC-------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC-------CceEE
Confidence 22222 3577887532 245 88999888877654 3443333 334333 678888642 24889
Q ss_pred EeCCCCcEEEccC---CCCCcceeEEE
Q psy11771 304 YDPKLNKWQLLTP---MLTRRSSIGAA 327 (347)
Q Consensus 304 yd~~~~~W~~~~~---~~~~r~~~~~~ 327 (347)
|||++.+++.... ++...+...++
T Consensus 607 ~~~~~~~~~~~~~~dGl~~~~f~~~~~ 633 (781)
T 3v9f_A 607 YITSKKCFYTYDHSNNIPQGSFISGCV 633 (781)
T ss_dssp EETTTTEEEEECGGGTCCSSCEEEEEE
T ss_pred EECCCCceEEecccCCccccccccCce
Confidence 9999998887643 44444333333
No 81
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.78 E-value=1.1 Score=44.32 Aligned_cols=133 Identities=11% Similarity=0.121 Sum_probs=79.6
Q ss_pred eEEEEeCCCCcEEeCCCC----CCCccc-eEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCC------CCCC
Q psy11771 159 SMERYDPLTGVWSSCPAM----TTRRRY-CRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAPVPS------MSSR 226 (347)
Q Consensus 159 ~~~~~d~~~~~W~~~~~~----~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~------~p~~ 226 (347)
-+.+||+.+++|+..... ...... .++.. .++.+|+... .-+++||+.++++ .... ++..
T Consensus 472 Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~ 543 (795)
T 4a2l_A 472 ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKL 543 (795)
T ss_dssp CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGS
T ss_pred ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCC
Confidence 478899999999876532 111111 12222 2567888543 3488999988888 4331 1111
Q ss_pred CcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcC---CCCCCCcceEEEEE-CCEEEEEeccCCCCCccEE
Q psy11771 227 RSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA---PMLSRRSTHEVVNI-EGYLLTMGGNDGSSSLNSV 301 (347)
Q Consensus 227 r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~v 301 (347)
...+++. -+|.|++... .-+++||+.+++++... .+|... ..+++.- +|.|++.+. +.+
T Consensus 544 -~i~~i~~d~~g~lWigT~-------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t~-------~Gl 607 (795)
T 4a2l_A 544 -FTNCIYEASNGIIWVGTR-------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLSTN-------RGI 607 (795)
T ss_dssp -CEEEEEECTTSCEEEEES-------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEET-------TEE
T ss_pred -eeEEEEECCCCCEEEEeC-------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEcC-------Cce
Confidence 1122222 2577887532 24889999999888764 344332 2233332 578888653 358
Q ss_pred EEEeCCCCcEEEcc
Q psy11771 302 EKYDPKLNKWQLLT 315 (347)
Q Consensus 302 ~~yd~~~~~W~~~~ 315 (347)
.+|||++++++...
T Consensus 608 ~~~~~~~~~~~~~~ 621 (795)
T 4a2l_A 608 SCFNPETEKFRNFT 621 (795)
T ss_dssp EEEETTTTEEEEEC
T ss_pred EEEcCCCCcEEEcC
Confidence 89999999988764
No 82
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.75 E-value=0.88 Score=39.75 Aligned_cols=147 Identities=11% Similarity=0.100 Sum_probs=78.1
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--C--CEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--E--NCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
+.+++.|+.+ ..+.+||..+++|..+..+.........+.. + +.+++.|+.+ ..+..||..+..-.
T Consensus 69 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~ 138 (379)
T 3jrp_A 69 GTILASCSYD-----GKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKENGTT 138 (379)
T ss_dssp CSEEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCTTSCC
T ss_pred CCEEEEeccC-----CEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCC-----CcEEEEecCCCCce
Confidence 5677777755 3578888888877655444322222222222 2 5566666643 46788888765211
Q ss_pred ecCCC-CCCCcceEEEEE--------------CCEEEEEcccCCCccCCeEEEEECCC--CeEEEcCCCCCCCcceEEEE
Q psy11771 219 PVPSM-SSRRSSCGVAAL--------------DGAIYCVGGNDGTMCMSSGERFNVRR--NSWEPIAPMLSRRSTHEVVN 281 (347)
Q Consensus 219 ~~~~~-p~~r~~~~~~~~--------------~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~~~~ 281 (347)
....+ .....-.+++.. ++.+++.|+.+ ..+..||..+ ..|..+..+.........+.
T Consensus 139 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~ 213 (379)
T 3jrp_A 139 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVA 213 (379)
T ss_dssp CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEEE
T ss_pred eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecCCCcceeeEEEEecccCcEeEEE
Confidence 11000 011111222222 46777777765 3577777654 34555443332222233344
Q ss_pred E--C---CEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 282 I--E---GYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 282 ~--~---~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
+ + +.+++.|+.++ .+.+||..+.
T Consensus 214 ~sp~~~~~~~l~s~~~dg-----~i~iwd~~~~ 241 (379)
T 3jrp_A 214 WSPTVLLRSYLASVSQDR-----TCIIWTQDNE 241 (379)
T ss_dssp ECCCCSSSEEEEEEETTS-----CEEEEEESST
T ss_pred ECCCCCCCCeEEEEeCCC-----EEEEEeCCCC
Confidence 4 4 68888887653 4778887765
No 83
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.73 E-value=2.3 Score=38.50 Aligned_cols=151 Identities=13% Similarity=0.235 Sum_probs=79.1
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEe-
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAP- 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~- 219 (347)
.++..++.|+.+ ..+.+||..+.+-... +............++..++.|+.+ ..+..||..+.+-..
T Consensus 287 ~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~ 354 (445)
T 2ovr_B 287 FDGIHVVSGSLD-----TSIRVWDVETGNCIHT--LTGHQSLTSGMELKDNILVSGNAD-----STVKIWDIKTGQCLQT 354 (445)
T ss_dssp ECSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCCSCEEEEEEETTEEEEEETT-----SCEEEEETTTCCEEEE
T ss_pred ECCCEEEEEeCC-----CeEEEEECCCCCEEEE--EcCCcccEEEEEEeCCEEEEEeCC-----CeEEEEECCCCcEEEE
Confidence 366677777754 3588899887653221 111112222233345555666543 468889987765322
Q ss_pred cCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-cCCCC--CCCcceEEEEE--CCEEEEEeccCC
Q psy11771 220 VPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IAPML--SRRSTHEVVNI--EGYLLTMGGNDG 294 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~~--~~~~~~~~~~~--~~~lyv~GG~~~ 294 (347)
+..............+++.+++.|+.+ ..+..||..+.+... +.... ........+.+ ++.++++|+.++
T Consensus 355 ~~~~~~~~~~v~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg 429 (445)
T 2ovr_B 355 LQGPNKHQSAVTCLQFNKNFVITSSDD-----GTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNG 429 (445)
T ss_dssp ECSTTSCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSS
T ss_pred EccCCCCCCCEEEEEECCCEEEEEeCC-----CeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCC
Confidence 222111222233445577777777754 578899998876533 21111 11111222333 445556666554
Q ss_pred CCCccEEEEEeCCCC
Q psy11771 295 SSSLNSVEKYDPKLN 309 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~ 309 (347)
. ....+.+||...+
T Consensus 430 ~-~~~~l~v~df~~~ 443 (445)
T 2ovr_B 430 T-EETKLLVLDFDVD 443 (445)
T ss_dssp S-SCCEEEEEECCCC
T ss_pred C-CccEEEEEECCCC
Confidence 3 2346888887654
No 84
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=94.72 E-value=1.6 Score=43.19 Aligned_cols=148 Identities=10% Similarity=0.149 Sum_probs=86.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCC-cc-ceEEE-EECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTR-RR-YCRIA-VVENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~-r~-~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++.|||... ..+.+||+.++++......... .. -.+++ .-++.||+... ..+++||+.++++.
T Consensus 98 ~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~~~~~~~~i~~i~~d~~g~lwi~t~-------~gl~~~~~~~~~~~ 163 (795)
T 4a2l_A 98 QGRVWIGTR-------DGLSRYDEEKDIFQNFFYEKNGKHLQVNGIEEISPEQLLISTP-------EGLIMFDIKESKFI 163 (795)
T ss_dssp TSCEEEEES-------SCEEEEETTTTEEEEECCEETTEECCCCEEEEEETTEEEEEET-------TEEEEEETTTTEEE
T ss_pred CCCEEEEeC-------CchheeCCCCCeEEeccccccCCCceEEEEEECCCCCEEEEEC-------CceEEEECCCCEEE
Confidence 467876432 3488999999888765432111 00 12222 33788888542 45899999988887
Q ss_pred ecCC-CCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEE-ECCEEEEEeccCCC
Q psy11771 219 PVPS-MSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVN-IEGYLLTMGGNDGS 295 (347)
Q Consensus 219 ~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~ 295 (347)
.... .+......++.. -++.||+.. .. ..+++||+.++++......+......+++. -++.|++... .
T Consensus 164 ~~~~~~~~~~~i~~i~~d~~g~lwigt-~~-----~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt~-~-- 234 (795)
T 4a2l_A 164 DDSFSTAMHKTIASTLYRQGDQIYIGT-ST-----DGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVATE-G-- 234 (795)
T ss_dssp CSSSCHHHHTCCEEEEEEETTEEEEEE-SS-----SCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEEB-S--
T ss_pred eccCCCCCCcceEEEEECCCCCEEEEE-CC-----CCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEEC-C--
Confidence 6543 111110123333 478888842 11 358899999999887643322222222332 3678887431 1
Q ss_pred CCccEEEEEeCCCCcEEEcc
Q psy11771 296 SSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~~ 315 (347)
+.+++||+.+++++...
T Consensus 235 ---~Gl~~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 235 ---AGLFLINPKTKEIKNYL 251 (795)
T ss_dssp ---SCEEEEETTTTEEEEEC
T ss_pred ---CCeEEEeCCCCeEEEee
Confidence 24889999998887764
No 85
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=94.57 E-value=0.47 Score=42.55 Aligned_cols=148 Identities=13% Similarity=0.154 Sum_probs=76.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWS-SCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++.+++.|+.+ ..+.+||..+.+-. .+...... -.+++.. +..+++.||... ...+..||..+.+-.
T Consensus 228 ~~~~l~s~~~d-----~~v~iwd~~~~~~~~~~~~~~~~--v~~~~~~p~~~~ll~~~~gs~---d~~i~i~d~~~~~~~ 297 (401)
T 4aez_A 228 DGLQLASGGND-----NVVQIWDARSSIPKFTKTNHNAA--VKAVAWCPWQSNLLATGGGTM---DKQIHFWNAATGARV 297 (401)
T ss_dssp TSSEEEEEETT-----SCEEEEETTCSSEEEEECCCSSC--CCEEEECTTSTTEEEEECCTT---TCEEEEEETTTCCEE
T ss_pred CCCEEEEEeCC-----CeEEEccCCCCCccEEecCCcce--EEEEEECCCCCCEEEEecCCC---CCEEEEEECCCCCEE
Confidence 55666777654 35888888775432 22211111 1222332 446777764211 256889998876543
Q ss_pred ecCCCCCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCC
Q psy11771 219 PVPSMSSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDG 294 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~ 294 (347)
..-... ....+++.. ++ .+++.+|... ..+..||..+........++........+.+ +++.++.||.+
T Consensus 298 ~~~~~~--~~v~~~~~s~~~~~l~~~~g~~d----g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~d- 370 (401)
T 4aez_A 298 NTVDAG--SQVTSLIWSPHSKEIMSTHGFPD----NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASD- 370 (401)
T ss_dssp EEEECS--SCEEEEEECSSSSEEEEEECTTT----CEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTT-
T ss_pred EEEeCC--CcEEEEEECCCCCeEEEEeecCC----CcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCC-
Confidence 221111 111222222 34 4444444322 5788899888776665433222222222333 67777777754
Q ss_pred CCCccEEEEEeCCCCc
Q psy11771 295 SSSLNSVEKYDPKLNK 310 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~ 310 (347)
..+.+||..+.+
T Consensus 371 ----g~i~iw~~~~~~ 382 (401)
T 4aez_A 371 ----ENLKFWRVYDGD 382 (401)
T ss_dssp ----SEEEEEECCC--
T ss_pred ----CcEEEEECCCCc
Confidence 368899987764
No 86
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=94.56 E-value=0.9 Score=38.90 Aligned_cols=175 Identities=13% Similarity=0.050 Sum_probs=88.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC--CCccceEEEE--ECCEEEEEcCcCC------CCccceEEEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT--TRRRYCRIAV--VENCLYALGGFDS------TNYQASVERLD 211 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~--~~r~~~~~~~--~~~~lyv~GG~~~------~~~~~~~~~yd 211 (347)
++++|+..+ +.+.+||+.+++++.+.... .+........ -++++|+..-... ......++++|
T Consensus 64 dG~l~v~~~-------~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d 136 (297)
T 3g4e_A 64 SGGYVATIG-------TKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLF 136 (297)
T ss_dssp TSSEEEEET-------TEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEEC
T ss_pred CCCEEEEEC-------CeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEE
Confidence 566666532 56899999998887654332 1222222222 2678887431111 01235788898
Q ss_pred CCCCcEEecC-CCCCCCcceEEEEE-C-CEEEEEcccCCCccCCeEEEEEC--CCCeEEE---cCCCCCCCcce-EEEEE
Q psy11771 212 PRMGKWAPVP-SMSSRRSSCGVAAL-D-GAIYCVGGNDGTMCMSSGERFNV--RRNSWEP---IAPMLSRRSTH-EVVNI 282 (347)
Q Consensus 212 ~~~~~W~~~~-~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~--~~~~W~~---~~~~~~~~~~~-~~~~~ 282 (347)
+.. +...+. .+.. ...++.. + +.+|+..... ..+++||. .+..... +..++...... +++.-
T Consensus 137 ~~g-~~~~~~~~~~~---pngi~~spdg~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 137 PDH-HVKKYFDQVDI---SNGLDWSLDHKIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp TTS-CEEEEEEEESB---EEEEEECTTSCEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred CCC-CEEEEeecccc---ccceEEcCCCCEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 863 333221 1111 1233332 3 4688876432 57888875 4554321 11222111112 23332
Q ss_pred -CCEEEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcCCCcceEEEE
Q psy11771 283 -EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLETLNIEKRLLV 340 (347)
Q Consensus 283 -~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~ 340 (347)
++.||+..... ..+.+||+++.+....-.+|. ....++.+++.. ...++|
T Consensus 208 ~~G~lwva~~~~-----~~v~~~d~~tG~~~~~i~~p~--~~~t~~~f~g~d-~~~L~v 258 (297)
T 3g4e_A 208 AEGKLWVACYNG-----GRVIRLDPVTGKRLQTVKLPV--DKTTSCCFGGKN-YSEMYV 258 (297)
T ss_dssp TTSCEEEEEETT-----TEEEEECTTTCCEEEEEECSS--SBEEEEEEESGG-GCEEEE
T ss_pred CCCCEEEEEcCC-----CEEEEEcCCCceEEEEEECCC--CCceEEEEeCCC-CCEEEE
Confidence 67888875321 369999999776544333442 334555665433 344554
No 87
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.56 E-value=1.8 Score=36.36 Aligned_cols=147 Identities=10% Similarity=0.057 Sum_probs=81.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.+|+.... ...+.+||+. .++.............+++.. ++.+|+.... ...+.+||+. .+....
T Consensus 72 ~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~ 139 (300)
T 2qc5_A 72 LGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEY 139 (300)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEE
T ss_pred CCCEEEEecC-----CCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEc
Confidence 5778887432 2468899988 666543211111223334333 6789887532 2468899987 555543
Q ss_pred CCCC-CCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCC
Q psy11771 221 PSMS-SRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSS 296 (347)
Q Consensus 221 ~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~ 296 (347)
. ++ ......+++. -++++|+....+ ..+++||+ +.+..... ++........+.+ ++.||+....
T Consensus 140 ~-~~~~~~~~~~i~~d~~g~l~v~~~~~-----~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~---- 207 (300)
T 2qc5_A 140 D-LPNKGSYPAFITLGSDNALWFTENQN-----NSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIM---- 207 (300)
T ss_dssp E-CSSTTCCEEEEEECTTSSEEEEETTT-----TEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT----
T ss_pred c-CCCCCCCceeEEECCCCCEEEEecCC-----CeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccC----
Confidence 2 12 1122233333 257788875321 57899998 56665542 2222222233333 5788886532
Q ss_pred CccEEEEEeCCCCcEEEc
Q psy11771 297 SLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~~~ 314 (347)
...+.+||+ +.++...
T Consensus 208 -~~~i~~~~~-~g~~~~~ 223 (300)
T 2qc5_A 208 -GNKIGRITT-TGEISEY 223 (300)
T ss_dssp -TTEEEEECT-TCCEEEE
T ss_pred -CCEEEEEcC-CCcEEEE
Confidence 236889998 5666554
No 88
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=94.51 E-value=0.8 Score=44.58 Aligned_cols=119 Identities=16% Similarity=0.231 Sum_probs=72.9
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCC--------CcceEEEEECCEEEEEcccCCCccCCe
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSR--------RSSCGVAALDGAIYCVGGNDGTMCMSS 253 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 253 (347)
+-+..++.||+... ...++.+|..+. .|+.-...+.. ....+.++.+++||+.... ..
T Consensus 61 ~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------g~ 128 (668)
T 1kv9_A 61 TPLFHDGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------GR 128 (668)
T ss_dssp CCEEETTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT------SE
T ss_pred CCEEECCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC------CE
Confidence 34567999999864 356899998765 48875443211 1122345678899886432 57
Q ss_pred EEEEECCCC--eEEEcCCCCC--CCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 254 GERFNVRRN--SWEPIAPMLS--RRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 254 v~~yd~~~~--~W~~~~~~~~--~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
++++|.++. .|+.-..-+. .....+.++.++++|+-.+.........+++||+++.+ |+.-
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999998876 4876542211 11122335568888874332221223579999998765 8753
No 89
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=94.50 E-value=0.19 Score=43.76 Aligned_cols=154 Identities=17% Similarity=0.140 Sum_probs=77.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+|+.++.+ ..++++|..+.+....-+.+.......++.. ++ .+|+.+.. ...++.||+.+.+-..
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCcEEE
Confidence 56788887643 5799999988875432222221012233332 34 68887642 2578999998876543
Q ss_pred cCCCCC-----CCcceEEEEE-CC-EEEEEccc---CCC---ccCCeEEEEECCCCeEEE-cCCCCCCCcceEEEEE-CC
Q psy11771 220 VPSMSS-----RRSSCGVAAL-DG-AIYCVGGN---DGT---MCMSSGERFNVRRNSWEP-IAPMLSRRSTHEVVNI-EG 284 (347)
Q Consensus 220 ~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~---~~~---~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~ 284 (347)
.-..+. ......++.. ++ .+|+.+.. ... .....+..||+.+++-.. +.....+....+++.. ++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg 159 (349)
T 1jmx_B 80 HANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDG 159 (349)
T ss_dssp EEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTS
T ss_pred EEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCC
Confidence 222221 1111222322 44 55655421 000 002578999987632111 1111112222222222 66
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCcEEE
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 313 (347)
++|+.++ ++.+||+.+.+-..
T Consensus 160 ~l~~~~~--------~i~~~d~~~~~~~~ 180 (349)
T 1jmx_B 160 SLYVAGP--------DIYKMDVKTGKYTV 180 (349)
T ss_dssp CEEEESS--------SEEEECTTTCCEEE
T ss_pred cEEEccC--------cEEEEeCCCCceec
Confidence 7777432 38899988776443
No 90
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.49 E-value=0.76 Score=44.80 Aligned_cols=119 Identities=18% Similarity=0.286 Sum_probs=73.9
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCC--------CcceEEEEECCEEEEEcccCCCccCCe
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSR--------RSSCGVAALDGAIYCVGGNDGTMCMSS 253 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~~ 253 (347)
+.+..++.||+... ...++.+|..+. .|+.-...+.. ....+.+..+++||+.... ..
T Consensus 72 ~P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~d------g~ 139 (677)
T 1kb0_A 72 TPVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAWD------GR 139 (677)
T ss_dssp CCEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECTT------SE
T ss_pred CCEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcCC------CE
Confidence 34567999999865 356899998875 48876543211 1123456678999986432 57
Q ss_pred EEEEECCCC--eEEEcCC-C-CC-CCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 254 GERFNVRRN--SWEPIAP-M-LS-RRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 254 v~~yd~~~~--~W~~~~~-~-~~-~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
++++|.++. .|+.-.. - +. .....+.++.++++|+..+..+......+++||.++.+ |+.-
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 999999766 4876432 1 11 11122334568888875542222224579999998775 8754
No 91
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.47 E-value=0.83 Score=43.53 Aligned_cols=120 Identities=17% Similarity=0.213 Sum_probs=72.1
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeC-CCC--cEEecCCCCCC--------CcceEEEEECCEEEEEcccCCCccCC
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDP-RMG--KWAPVPSMSSR--------RSSCGVAALDGAIYCVGGNDGTMCMS 252 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~-~~~--~W~~~~~~p~~--------r~~~~~~~~~~~iyv~GG~~~~~~~~ 252 (347)
+.+..++.||+.... ...++++|. .+. .|+.-...+.. ....+.++.+++||+.... .
T Consensus 57 ~P~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------g 125 (571)
T 2ad6_A 57 APLVIGDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQAN------G 125 (571)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------S
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeCC------C
Confidence 345679999998652 246899998 665 59875443211 1123446678999987542 5
Q ss_pred eEEEEECCCC--eEEEcCCCC-CC-CcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 253 SGERFNVRRN--SWEPIAPML-SR-RSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 253 ~v~~yd~~~~--~W~~~~~~~-~~-~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
.++++|.++. .|+.-..-+ .. ....+-++.++++|+-.+..+......+++||+++.+ |+.-
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 7999998776 587543211 11 1112234568988875432111123579999998764 8753
No 92
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=94.46 E-value=1.1 Score=38.22 Aligned_cols=107 Identities=14% Similarity=0.210 Sum_probs=55.6
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccc-eEEEEE---CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRY-CRIAVV---ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~-~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.+++.++.|+.+ ..+.+||..+.+.+.+..+...... .+++.. ++.+++.|+.+ ..+..||..+.+
T Consensus 19 ~~g~~las~s~D-----~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D-----~~v~iWd~~~~~ 88 (297)
T 2pm7_B 19 YYGKRMATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVMIWKEENGR 88 (297)
T ss_dssp TTSSEEEEEETT-----SCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----TEEEEEEBSSSC
T ss_pred CCCCEEEEEeCC-----CEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC-----CEEEEEEcCCCc
Confidence 456777778765 3477788765433222222211111 122221 25566666643 568889988877
Q ss_pred EEecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 217 WAPVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
|..+..+.........+.+ + +.+++.|+.+ ..+..||..+.
T Consensus 89 ~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~ 133 (297)
T 2pm7_B 89 WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKEN 133 (297)
T ss_dssp BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSS
T ss_pred eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCC
Confidence 6554332211112222333 2 5566667654 46777777654
No 93
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.40 E-value=2.4 Score=37.18 Aligned_cols=145 Identities=16% Similarity=0.175 Sum_probs=75.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE----CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV----ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
++..++.|+.+ ..+.++|..+.+.... +........+... ++..++.|+.+ ..+..||..+.+.
T Consensus 165 ~~~~l~t~s~D-----~~v~lwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~~ 232 (354)
T 2pbi_B 165 SDMQILTASGD-----GTCALWDVESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQC 232 (354)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CcEEEEeCCCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 34444555533 4688888887654221 1111111111111 34666777654 4688899887764
Q ss_pred EecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccC
Q psy11771 218 APVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGND 293 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~ 293 (347)
...-..... ....+.+ ++..++.|+.+ ..+..||..+..-...-...........+.+ ++++++.|+.+
T Consensus 233 ~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d 305 (354)
T 2pbi_B 233 VQAFETHES--DVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYND 305 (354)
T ss_dssp EEEECCCSS--CEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred EEEecCCCC--CeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC
Confidence 332111111 1222233 56677777765 4688899887653322221122223334444 57777777654
Q ss_pred CCCCccEEEEEeCCCCc
Q psy11771 294 GSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~ 310 (347)
..+.+||..+.+
T Consensus 306 -----~~i~vwd~~~~~ 317 (354)
T 2pbi_B 306 -----YTINVWDVLKGS 317 (354)
T ss_dssp -----SCEEEEETTTCS
T ss_pred -----CcEEEEECCCCc
Confidence 358899986654
No 94
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.35 E-value=1.9 Score=35.86 Aligned_cols=159 Identities=18% Similarity=0.037 Sum_probs=83.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+++.+++++.... ....++.++..+.....+..... ...++.. ++ .+++.++.++ ...++.+|..+.....
T Consensus 95 dg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~~~~---~~~l~~~~~~~~~~~~ 167 (297)
T 2ojh_A 95 DGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTKNLP---SYWHGWSPDGKSFTYCGIRDQ---VFDIYSMDIDSGVETR 167 (297)
T ss_dssp TSSEEEEEECTTT-SSCEEEEEETTCCCCEECCSSSS---EEEEEECTTSSEEEEEEEETT---EEEEEEEETTTCCEEE
T ss_pred CCCEEEEEEeCCC-CcceEEEEECCCCceEEeecCCC---ccceEECCCCCEEEEEECCCC---ceEEEEEECCCCcceE
Confidence 5555555553221 23678999988776555543322 2222222 34 4554554332 2467777787777766
Q ss_pred cCCCCCCCcceEEEE-ECCE-EEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAA-LDGA-IYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
+...+... ..++. -+++ |++.+..++ ...++.++........+.... .....+.+ +++.+++++.++.
T Consensus 168 ~~~~~~~~--~~~~~s~dg~~l~~~~~~~~---~~~i~~~~~~~~~~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~ 239 (297)
T 2ojh_A 168 LTHGEGRN--DGPDYSPDGRWIYFNSSRTG---QMQIWRVRVDGSSVERITDSA---YGDWFPHPSPSGDKVVFVSYDAD 239 (297)
T ss_dssp CCCSSSCE--EEEEECTTSSEEEEEECTTS---SCEEEEEETTSSCEEECCCCS---EEEEEEEECTTSSEEEEEEEETT
T ss_pred cccCCCcc--ccceECCCCCEEEEEecCCC---CccEEEECCCCCCcEEEecCC---cccCCeEECCCCCEEEEEEcCCC
Confidence 65433221 22222 2454 444443222 357888888777776665422 12222333 5555555543221
Q ss_pred C------CccEEEEEeCCCCcEEEcc
Q psy11771 296 S------SLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 296 ~------~~~~v~~yd~~~~~W~~~~ 315 (347)
. ....++.||..+.+...+.
T Consensus 240 ~~~~~~~~~~~l~~~d~~~~~~~~~~ 265 (297)
T 2ojh_A 240 VFDHPRDLDVRVQLMDMDGGNVETLF 265 (297)
T ss_dssp CCSCCSSEEEEEEEEETTSCSCEEEE
T ss_pred CCcccccCceEEEEEecCCCCceeee
Confidence 1 1256999999988776554
No 95
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=94.23 E-value=1.2 Score=38.70 Aligned_cols=146 Identities=16% Similarity=0.118 Sum_probs=74.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWS-SCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.+++.|+.+ ..+.++|..+.+-. .+..-+.... ......+++.++.|+.+ ..+..||..+.+-...
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~spdg~~l~~g~~d-----g~v~i~~~~~~~~~~~ 159 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSIDAGPVDAW-TLAFSPDSQYLATGTHV-----GKVNIFGVESGKKEYS 159 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCCC-CEEECTTSSEEEEECTT-----SEEEEEETTTCSEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEeCCCccEE-EEEECCCCCEEEEEcCC-----CcEEEEEcCCCceeEE
Confidence 34556666644 45788888776532 2211111111 11112255666666643 4577888876543221
Q ss_pred CCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCC
Q psy11771 221 PSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSS 297 (347)
Q Consensus 221 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~ 297 (347)
-.. ......+++. -+++.++.|+.+ ..+..||..+.+-... +.........+.+ ++++++.|+.++
T Consensus 160 ~~~-~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg--- 228 (321)
T 3ow8_A 160 LDT-RGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG--- 228 (321)
T ss_dssp EEC-SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS---
T ss_pred ecC-CCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC---
Confidence 111 1111122222 256777777764 4688899987753321 1111111122333 677777777543
Q ss_pred ccEEEEEeCCCCcE
Q psy11771 298 LNSVEKYDPKLNKW 311 (347)
Q Consensus 298 ~~~v~~yd~~~~~W 311 (347)
.+.+||..+.+.
T Consensus 229 --~i~iwd~~~~~~ 240 (321)
T 3ow8_A 229 --YIKIYDVQHANL 240 (321)
T ss_dssp --CEEEEETTTCCE
T ss_pred --eEEEEECCCcce
Confidence 488888876654
No 96
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=94.15 E-value=2.9 Score=39.88 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=67.0
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCC---c---cceEEEEECCEEEEEcCcCCCCccceEEE
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTR---R---RYCRIAVVENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~---r---~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 209 (347)
-++.++.||+.+.. ..++.+|..+.+ |+.-...+.. . ...+.+..+++||+... ...++.
T Consensus 64 P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~------dg~l~A 131 (582)
T 1flg_A 64 AIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL------DASVVA 131 (582)
T ss_dssp CEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET------TTEEEE
T ss_pred cEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC------CCEEEE
Confidence 35579999998652 248999988765 8764332211 1 11234567899988532 256899
Q ss_pred EeCCCCc--EEecCCCCCCC--cceEEEEECC------EEEEEcccCCCccCCeEEEEECCCC--eEEE
Q psy11771 210 LDPRMGK--WAPVPSMSSRR--SSCGVAALDG------AIYCVGGNDGTMCMSSGERFNVRRN--SWEP 266 (347)
Q Consensus 210 yd~~~~~--W~~~~~~p~~r--~~~~~~~~~~------~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~ 266 (347)
+|..+.+ |+.-..-+... ...+-++.++ .+|+-...........++.||.++. .|+.
T Consensus 132 lD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeec
Confidence 9998764 87643221111 1122234555 6665321111112367999999876 4865
No 97
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=94.14 E-value=2 Score=35.24 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=79.6
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCCc-E--EeC----CCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTGV-W--SSC----PAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W--~~~----~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 208 (347)
+++..++++|+|=| +.+|+++..... . ..+ +.+|. .-..+... .++++|+|-| +..|
T Consensus 35 Ai~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~yW 99 (218)
T 1gen_A 35 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEYW 99 (218)
T ss_dssp EEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEEE
Confidence 44557999999987 556766654321 1 111 22332 22222222 2689999987 7789
Q ss_pred EEeCCCCc--E-EecC--CCCCCC-cceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeEEE-----cC-C-CCCC
Q psy11771 209 RLDPRMGK--W-APVP--SMSSRR-SSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-----IA-P-MLSR 273 (347)
Q Consensus 209 ~yd~~~~~--W-~~~~--~~p~~r-~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-----~~-~-~~~~ 273 (347)
+||..+.. + ..+. .+|... .--++.. .++++|++-| +..++||..+++-.. +. . +..+
T Consensus 100 ~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~v~~gyPr~i~~~w~g~p 172 (218)
T 1gen_A 100 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 172 (218)
T ss_dssp EEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCEEHHHHSSSCC
T ss_pred EEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECccccccCCCCcchhhccCCCC
Confidence 99853110 0 1111 123211 1223333 3689999987 689999987764321 11 0 1112
Q ss_pred CcceEEEEEC--CEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 274 RSTHEVVNIE--GYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 274 ~~~~~~~~~~--~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
....++...+ +.+|.|-| +..+.||..+..
T Consensus 173 ~~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 173 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp SSCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred CCCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 2233444444 89999987 468888876554
No 98
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=93.99 E-value=1.3 Score=40.26 Aligned_cols=104 Identities=11% Similarity=0.099 Sum_probs=57.9
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
++..++.|+.+ ..+..||..+.+-...-...... -.+++. -++...+.|+.+ ..+..||..+.+-..
T Consensus 279 ~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~~~~- 346 (464)
T 3v7d_B 279 HGNIVVSGSYD-----NTLIVWDVAQMKCLYILSGHTDR-IYSTIYDHERKRCISASMD-----TTIRIWDLENGELMY- 346 (464)
T ss_dssp ETTEEEEEETT-----SCEEEEETTTTEEEEEECCCSSC-EEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEEE-
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEecCCCCC-EEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCcEEE-
Confidence 44455555543 46888998876533221111221 222222 255666677654 468899998765322
Q ss_pred CCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 268 APMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.+.........+.+++..++.|+.+ ..+.+||..+.+
T Consensus 347 -~~~~h~~~v~~~~~~~~~l~s~s~d-----g~v~vwd~~~~~ 383 (464)
T 3v7d_B 347 -TLQGHTALVGLLRLSDKFLVSAAAD-----GSIRGWDANDYS 383 (464)
T ss_dssp -EECCCSSCEEEEEECSSEEEEEETT-----SEEEEEETTTCC
T ss_pred -EEeCCCCcEEEEEEcCCEEEEEeCC-----CcEEEEECCCCc
Confidence 2222222334555667777777754 368899988765
No 99
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=93.89 E-value=0.98 Score=39.76 Aligned_cols=152 Identities=9% Similarity=-0.009 Sum_probs=72.8
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC--CC-CCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA--MT-TRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~-~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++-..+..++.|+.+ ..+.++|..+++-..... +. ....-.+++.. +++.++.|+.+ ..+..||..
T Consensus 88 ~~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d-----~~i~iwd~~ 157 (344)
T 4gqb_B 88 LTWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKD-----ICIKVWDLA 157 (344)
T ss_dssp EEEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETT
T ss_pred EEEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECC
Confidence 333444445566644 357888887764211110 10 11111222222 56666777644 458889988
Q ss_pred CCcEEecCCCCCCCcceEEEE-EC-CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE---CCEEEE
Q psy11771 214 MGKWAPVPSMSSRRSSCGVAA-LD-GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI---EGYLLT 288 (347)
Q Consensus 214 ~~~W~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv 288 (347)
+++-...-.-.... -.+++. .+ ..+++.|+.+ ..+..||..+.+-...-..........++.+ ++++++
T Consensus 158 ~~~~~~~~~~h~~~-V~~~~~~~~~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 158 QQVVLSSYRAHAAQ-VTCVAASPHKDSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp TTEEEEEECCCSSC-EEEEEECSSCTTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEE
T ss_pred CCcEEEEEcCcCCc-eEEEEecCCCCCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceE
Confidence 76532211111111 122222 23 3577777765 4688899887653322111111112223333 456777
Q ss_pred EeccCCCCCccEEEEEeCCCCc
Q psy11771 289 MGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 289 ~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.|+.+ ..+.+||..+.+
T Consensus 232 sg~~d-----g~v~~wd~~~~~ 248 (344)
T 4gqb_B 232 FGDEN-----GTVSLVDTKSTS 248 (344)
T ss_dssp EEETT-----SEEEEEESCC--
T ss_pred EeccC-----CcEEEEECCCCc
Confidence 77754 357788876553
No 100
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=93.86 E-value=0.78 Score=39.37 Aligned_cols=140 Identities=15% Similarity=0.083 Sum_probs=70.1
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCc-cceEEEE-ECC-EEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCC----Ccce
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRR-RYCRIAV-VEN-CLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSR----RSSC 230 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r-~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~----r~~~ 230 (347)
..+..+|..+.+....-..+... ....++. -++ .+|+.++. ...+..||+.+.+-...-+.+.+ ....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 56888998887643322222210 1122222 244 78887653 25789999987764332111110 0111
Q ss_pred EEEE-ECC-EEEEEccc---CCCc---cCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCccE
Q psy11771 231 GVAA-LDG-AIYCVGGN---DGTM---CMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGY-LLTMGGNDGSSSLNS 300 (347)
Q Consensus 231 ~~~~-~~~-~iyv~GG~---~~~~---~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~ 300 (347)
.++. -++ .+|+.... .... ....+..||..+.+....-+.. .....++.. +++ ||+.+ ..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~--------~~ 155 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP--RQITMLAWARDGSKLYGLG--------RD 155 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC--SSCCCEEECTTSSCEEEES--------SS
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC--CCcceeEECCCCCEEEEeC--------Ce
Confidence 2222 244 67776421 0010 1268999999887654322221 112223332 444 66652 35
Q ss_pred EEEEeCCCCcEE
Q psy11771 301 VEKYDPKLNKWQ 312 (347)
Q Consensus 301 v~~yd~~~~~W~ 312 (347)
+.+||+.+.+-.
T Consensus 156 i~~~d~~~~~~~ 167 (337)
T 1pby_B 156 LHVMDPEAGTLV 167 (337)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEe
Confidence 889998877644
No 101
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=93.82 E-value=0.98 Score=44.53 Aligned_cols=106 Identities=13% Similarity=0.163 Sum_probs=63.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--C--CEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--E--NCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
++..++.||.+ ..+.+||..++++.....+............ + +..++.|+.+ ..+..||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 45666777754 4578888776666655444433333333332 3 5666677644 4588899988887
Q ss_pred EecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 218 APVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
..+..+.........+.+ + +.++++|+.+ ..+..||..+.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 766544332222333333 3 6677777754 47888888765
No 102
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.75 E-value=3.2 Score=36.86 Aligned_cols=110 Identities=8% Similarity=0.050 Sum_probs=58.4
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
.....++..++.|+.+ ..+.+||..+.+-...-.- ....-.+++.. ++++++.|+.+ ..+..||..+.
T Consensus 103 ~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~ 171 (420)
T 3vl1_A 103 DTAKLQMRRFILGTTE-----GDIKVLDSNFNLQREIDQA-HVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDG 171 (420)
T ss_dssp EEECSSSCEEEEEETT-----SCEEEECTTSCEEEEETTS-SSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTC
T ss_pred EEEecCCCEEEEEECC-----CCEEEEeCCCcceeeeccc-ccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCC
Confidence 3344577788888755 3588889887654332111 11111222222 55566666643 56888998765
Q ss_pred cE-EecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 216 KW-APVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 216 ~W-~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
+- ..+.. ....-.+++.. ++..++.|+.+ ..+..||..+.+-
T Consensus 172 ~~~~~~~~--h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 172 SNPRTLIG--HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTT 215 (420)
T ss_dssp CCCEEEEC--CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEE
T ss_pred cCceEEcC--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCce
Confidence 31 11111 11111223332 56666667654 4688889887653
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.73 E-value=1.4 Score=39.37 Aligned_cols=152 Identities=17% Similarity=0.119 Sum_probs=78.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-----CCCCCCCccc-eEEEEE-CC-EEEEEcCcCCCCccceEEEEeCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-----CPAMTTRRRY-CRIAVV-EN-CLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-----~~~~~~~r~~-~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++.+++.|+.+ ..+.+||..++.... +..+...... .+++.. ++ .+++.|+.+ ..+..||..
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~ 162 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD-----NVILVWDVG 162 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT-----SCEEEEETT
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC-----CEEEEEECC
Confidence 66777787755 458888887764321 1111111111 222222 33 466666643 458899998
Q ss_pred CCcEEecCC-CCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcC-CCCCCCcceEEEEE-CCEEEEE
Q psy11771 214 MGKWAPVPS-MSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA-PMLSRRSTHEVVNI-EGYLLTM 289 (347)
Q Consensus 214 ~~~W~~~~~-~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~~-~~~lyv~ 289 (347)
+.+....-. ......-.+++.. ++.+++.|+.+ ..+..||+.+.+-...- ..........++.. ++++++.
T Consensus 163 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 163 TGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTT 237 (402)
T ss_dssp TTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEE
T ss_pred CCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEE
Confidence 876543211 1111112222222 56667777654 57899999887643321 11111111222222 6787777
Q ss_pred eccCCCCCccEEEEEeCCCCc
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~ 310 (347)
|.... ....+.+||..+.+
T Consensus 238 g~~~~--~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 238 GFSRM--SERQVALWDTKHLE 256 (402)
T ss_dssp EECTT--CCEEEEEEETTBCS
T ss_pred eccCC--CCceEEEEcCcccc
Confidence 72111 12468899887643
No 104
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.71 E-value=1.7 Score=38.36 Aligned_cols=142 Identities=9% Similarity=-0.003 Sum_probs=78.0
Q ss_pred EEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC-CCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 144 LLYACGGYDGASCLSSMERYDPLTGVWSSCPAM-TTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 144 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
.+++.|+.+ ..+.+||..+.+....-.. .....-.+++.. ++..++.|+.+ ..+..||..+.....+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDFSGSVIQVF 156 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT-----TEEEEEETTSCEEEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEECCCCceEEE
Confidence 677777754 3588899988776544332 122222233333 34666666543 5688899988776665
Q ss_pred CCCCCCCc-ceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCE-EEEEeccCCC
Q psy11771 221 PSMSSRRS-SCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGY-LLTMGGNDGS 295 (347)
Q Consensus 221 ~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~-lyv~GG~~~~ 295 (347)
........ ..+++. -++.+++.|+.+ ..+..||.....-..+... ......+.+ +++ +++.|+.+
T Consensus 157 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~h---~~~v~~~~~~~~~~~~l~s~~~d-- 226 (383)
T 3ei3_B 157 AKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKEKLH---KAKVTHAEFNPRCDWLMATSSVD-- 226 (383)
T ss_dssp ECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEEECS---SSCEEEEEECSSCTTEEEEEETT--
T ss_pred eccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEeccC---CCcEEEEEECCCCCCEEEEEeCC--
Confidence 43322111 122222 356667777654 5788899865544333221 112223333 344 66777653
Q ss_pred CCccEEEEEeCCC
Q psy11771 296 SSLNSVEKYDPKL 308 (347)
Q Consensus 296 ~~~~~v~~yd~~~ 308 (347)
..+.+||..+
T Consensus 227 ---~~i~iwd~~~ 236 (383)
T 3ei3_B 227 ---ATVKLWDLRN 236 (383)
T ss_dssp ---SEEEEEEGGG
T ss_pred ---CEEEEEeCCC
Confidence 3577777765
No 105
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=93.71 E-value=1 Score=40.58 Aligned_cols=145 Identities=14% Similarity=0.133 Sum_probs=76.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccc-eEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRY-CRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.+||..+.+.... +...... .+++. .++++++.|+.+ ..+..||..+.+-.
T Consensus 119 ~~~~l~s~s~D-----g~i~vwd~~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D-----~~i~iwd~~~~~~~- 185 (410)
T 1vyh_C 119 VFSVMVSASED-----ATIKVWDYETGDFERT--LKGHTDSVQDISFDHSGKLLASCSAD-----MTIKLWDFQGFECI- 185 (410)
T ss_dssp SSSEEEEEESS-----SCEEEEETTTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SCCCEEETTSSCEE-
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEeCCCCcee-
Confidence 45677777755 3588889877653221 1111111 12222 256677777754 44677887665422
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
..+.........+.+ ++..++.|+.+ ..+..||..+..-... +.........+.. ++++++.|+.++
T Consensus 186 -~~~~~h~~~V~~v~~~p~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~- 256 (410)
T 1vyh_C 186 -RTMHGHDHNVSSVSIMPNGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ- 256 (410)
T ss_dssp -ECCCCCSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS-
T ss_pred -EEEcCCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC-
Confidence 222211112222333 55666777654 5788899887653221 1111112223333 567777777543
Q ss_pred CCccEEEEEeCCCCcEE
Q psy11771 296 SSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~ 312 (347)
.+.+||..+.+..
T Consensus 257 ----~v~vwd~~~~~~~ 269 (410)
T 1vyh_C 257 ----TVRVWVVATKECK 269 (410)
T ss_dssp ----CEEEEETTTCCEE
T ss_pred ----eEEEEECCCCcee
Confidence 5788888776543
No 106
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=93.66 E-value=0.92 Score=39.72 Aligned_cols=138 Identities=14% Similarity=0.146 Sum_probs=70.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceE-EEEE-CCEEEEEcCcCCCCccceEEEEeCCCC-cEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCR-IAVV-ENCLYALGGFDSTNYQASVERLDPRMG-KWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~-~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~ 218 (347)
+++.++.|+.++ .+.++|..+..++.+..+........ ++.. +++.++.|+.+ ..+..||..+. .+.
T Consensus 72 ~g~~l~s~s~D~-----~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-----~~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 72 CGNYLASASFDA-----TTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-----KSVWVWEVDEEDEYE 141 (345)
T ss_dssp TSSEEEEEETTS-----CEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEEECTTSCEE
T ss_pred CCCEEEEEECCC-----cEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-----CeEEEEECCCCCCeE
Confidence 566777777553 46667776665544333322222222 2222 56666667644 45778887654 333
Q ss_pred ecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCC
Q psy11771 219 PVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDG 294 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~ 294 (347)
.+..+.........+.+ ++.+++.|+.+ ..+..||..+..|.....+.........+.+ +++.++.|+.++
T Consensus 142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~ 216 (345)
T 3fm0_A 142 CVSVLNSHTQDVKHVVWHPSQELLASASYD-----DTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216 (345)
T ss_dssp EEEEECCCCSCEEEEEECSSSSCEEEEETT-----SCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEecCcCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCC
Confidence 32222211111222222 56667777754 4678888888888654433322222233333 566677776543
No 107
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=93.56 E-value=1.2 Score=40.96 Aligned_cols=136 Identities=10% Similarity=0.136 Sum_probs=76.1
Q ss_pred EEEEE-CCEEEEEcccCCCCCCCeEEEEe-----CCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEE
Q psy11771 137 GTCSF-DGLLYACGGYDGASCLSSMERYD-----PLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERL 210 (347)
Q Consensus 137 ~~~~~-~~~lyv~GG~~~~~~~~~~~~~d-----~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~y 210 (347)
+++.. ++++|+|=|. -+|+.. +.+..|..+ |.. ...+....++++|+|-| +.+|+|
T Consensus 60 Ait~~~~G~~yfFkg~-------~~Wr~~~~~p~~I~~~Wp~L---P~~-IDAa~~~~~g~~yfFkG-------~~yW~~ 121 (460)
T 1qhu_A 60 ATTLDDNGTMLFFKDE-------FVWKSHRGIRELISERWKNF---IGP-VDAAFRHGHTSVYLIKG-------DKVWVY 121 (460)
T ss_dssp EEEECTTSCEEEEETT-------EEEETTTTEEEEHHHHSTTC---CSC-CSEEEEETTTEEEEEET-------TEEEEE
T ss_pred EEEECCCCcEEEEeCC-------EEEEeCCCCceehhhhhccC---CCc-cceEEEeCCCcEEEEec-------cEEEEE
Confidence 55666 5899999772 333321 122334433 322 22222222589999987 668888
Q ss_pred eCCCCc--E-Eec----CCCCCCCcceEEEE------ECCEEEEEcccCCCccCCeEEEEECCCCeEEEc--CCCCCCCc
Q psy11771 211 DPRMGK--W-APV----PSMSSRRSSCGVAA------LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI--APMLSRRS 275 (347)
Q Consensus 211 d~~~~~--W-~~~----~~~p~~r~~~~~~~------~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~~~ 275 (347)
+-..-. . ..+ +.+|.. .. ++.. .++++|++-| +..|+||..+.+...- +.+| ..
T Consensus 122 ~~~~~~~GYPk~I~~~fpGlp~~-ID-AA~~~~~~~~~~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~gi~--~i 190 (460)
T 1qhu_A 122 TSEKNEKVYPKSLQDEFPGIPFP-LD-AAVECHRGECQDEGILFFQG-------NRKWFWDLTTGTKKERSWPAVG--NC 190 (460)
T ss_dssp CC-------CEEHHHHSTTCCSS-CC-EEEEECBBTBSSSEEEEEET-------TEEEEEETTTTEEEEECCTTSC--CC
T ss_pred eCCcccCCCCeEhhhccCCCCCC-ee-EEEECCccCCCCCeEEEEec-------ccEEEEecccceeecccCCCCC--cc
Confidence 643211 0 111 234432 12 2222 2678898887 5789999988765432 2233 22
Q ss_pred ceEEEEECCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 276 THEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 276 ~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
-++...++++|+|-| +..+.||+.++
T Consensus 191 -DAA~~~~g~~YfFkG-------~~y~rfd~~~~ 216 (460)
T 1qhu_A 191 -TSALRWLGRYYCFQG-------NQFLRFNPVSG 216 (460)
T ss_dssp -SEEEEETTEEEEEET-------TEEEEECTTTC
T ss_pred -chheeeCCceEEEEC-------CEEEEEcCccC
Confidence 345556899999988 46888987654
No 108
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.49 E-value=4.3 Score=39.99 Aligned_cols=148 Identities=11% Similarity=0.112 Sum_probs=83.8
Q ss_pred CCE-EEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC---CC--Cccce-EEEEE---CCEEEEEcCcCCCCccceEEEEe
Q psy11771 142 DGL-LYACGGYDGASCLSSMERYDPLTGVWSSCPAM---TT--RRRYC-RIAVV---ENCLYALGGFDSTNYQASVERLD 211 (347)
Q Consensus 142 ~~~-lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---~~--~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~yd 211 (347)
++. |||... . ..+.+||+.++++...... +. +.... +++.. ++.||+..- ...+++||
T Consensus 76 ~g~~lWigt~-~-----~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~lwi~t~------~~gl~~~~ 143 (781)
T 3v9f_A 76 VQPVIWIATQ-R-----AGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGLWVCTY------YRGIEYLD 143 (781)
T ss_dssp SSSEEEEEES-S-----SCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEEEEEES------SSCEEEEE
T ss_pred CCCEEEEEeC-C-----CCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCEEEEEC------CCCeeEEE
Confidence 356 887422 1 1489999999998765321 11 11112 22222 578888531 13589999
Q ss_pred CCCCcEEecCC-----CCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCC-----C-CcceEE
Q psy11771 212 PRMGKWAPVPS-----MSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLS-----R-RSTHEV 279 (347)
Q Consensus 212 ~~~~~W~~~~~-----~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-----~-~~~~~~ 279 (347)
+.++++..... ++... ..+++. -++.||+... . .-+++||+.++++......+. + ....++
T Consensus 144 ~~~~~~~~~~~~~~~~l~~~~-i~~i~~d~~g~lwigt~-~-----~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i 216 (781)
T 3v9f_A 144 IATGKFTHYNKSTVPALPSEQ-TWTATEAEDGKLYIGHV-E-----GGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCI 216 (781)
T ss_dssp TTTTEEEEESTTTCTTCSCCC-EEEEEEEETTEEEEEET-T-----TEEEEEETTTTEEEEECC--------CCSSEEEE
T ss_pred CCCCeEEeeccCcccCCCccc-eEEEEECCCCCEEEEec-C-----CCeEEEcCCCCceEeeecCCCCcccCCCCceeEE
Confidence 99999887653 22222 223333 4788998421 1 358899999998876542211 1 111222
Q ss_pred EEE-CCEEEEEeccCCCCCccEEEEEeCCCCcEEEcc
Q psy11771 280 VNI-EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 280 ~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 315 (347)
+.- ++.|+|-.. +.+.+||+.+++++.+.
T Consensus 217 ~~d~~g~lwigt~-------~Gl~~~d~~~~~~~~~~ 246 (781)
T 3v9f_A 217 YKDTNGNIWIGTS-------KGLALFNANTETFTNFH 246 (781)
T ss_dssp EECTTCCEEEEET-------TEEEEEETTTTEEEC--
T ss_pred EEcCCCCEEEEeC-------CcHheECCCCCcEEEEE
Confidence 222 466776432 25889999998887654
No 109
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.43 E-value=2.8 Score=41.23 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=76.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC--CCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA--MTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++.|+++||.. .-+.+||+.+++++.... +.......++.. -++.||+... .-+.+||+.+++++
T Consensus 482 ~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~~ 549 (758)
T 3ott_A 482 EGNVWVLLYNN-----KGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGFH-------GGVMRINPKDESQQ 549 (758)
T ss_dssp TSCEEEEETTC-----SSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEET-------TEEEEECC--CCCC
T ss_pred CCCEEEEccCC-----CCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEec-------CceEEEecCCCceE
Confidence 57788866643 348999999998877532 111111122222 2578886432 34889999988876
Q ss_pred ecC--CCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCC
Q psy11771 219 PVP--SMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGS 295 (347)
Q Consensus 219 ~~~--~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~ 295 (347)
... .+|.. ...+++.-+|.|++... +-+.+||+++.+..... ++.......+... +|+||+ ||.
T Consensus 550 ~~~~~gl~~~-~i~~i~~~~g~lWi~t~-------~Gl~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~G~l~f-G~~--- 616 (758)
T 3ott_A 550 SISFGSFSNN-EILSMTCVKNSIWVSTT-------NGLWIIDRKTMDARQQN-MTNKRFTSLLFDPKEDCVYL-GGA--- 616 (758)
T ss_dssp BCCCCC---C-CEEEEEEETTEEEEEES-------SCEEEEETTTCCEEEC---CCCCCSEEEEETTTTEEEE-ECB---
T ss_pred EecccCCCcc-ceEEEEECCCCEEEECC-------CCeEEEcCCCceeEEec-CCCCceeeeEEECCCCcEEE-ecC---
Confidence 653 34432 22344445788888653 45889999998876543 3333232222222 567665 653
Q ss_pred CCccEEEEEeCCC
Q psy11771 296 SSLNSVEKYDPKL 308 (347)
Q Consensus 296 ~~~~~v~~yd~~~ 308 (347)
+-+..|||+.
T Consensus 617 ---~Gl~~f~p~~ 626 (758)
T 3ott_A 617 ---DGFGISHSNL 626 (758)
T ss_dssp ---SEEEEEEC--
T ss_pred ---CceEEEChhh
Confidence 3466777763
No 110
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=93.36 E-value=0.93 Score=39.46 Aligned_cols=143 Identities=10% Similarity=0.108 Sum_probs=72.7
Q ss_pred eEEEEeCCCCcEEeCCCCCCCccceEEE-EECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCC-CCCcceEEEE-E
Q psy11771 159 SMERYDPLTGVWSSCPAMTTRRRYCRIA-VVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMS-SRRSSCGVAA-L 235 (347)
Q Consensus 159 ~~~~~d~~~~~W~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-~~r~~~~~~~-~ 235 (347)
.++.+|..+.+++.+...........++ .-++++|+.+... ....++.||..+.+++.+.... ....-..++. -
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~sp 95 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDE 95 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEET
T ss_pred EEEEEcCCCCeEEEeeeeeccCCcceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECC
Confidence 3677888888876543222111112222 2367788876421 1357889999877776655422 1111223333 3
Q ss_pred CC-EEEEEcccCCCccCCeEEEEECC-CCeEEEcCCC------CCCC---cceEEEEE--CCEEEEEeccCCCCCccEEE
Q psy11771 236 DG-AIYCVGGNDGTMCMSSGERFNVR-RNSWEPIAPM------LSRR---STHEVVNI--EGYLLTMGGNDGSSSLNSVE 302 (347)
Q Consensus 236 ~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~------~~~~---~~~~~~~~--~~~lyv~GG~~~~~~~~~v~ 302 (347)
++ .||+.+..+ ..+..||.. +.+...+... |..| .....+.+ ++++|+.+..+ +.+.
T Consensus 96 dg~~l~~~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~-----~~v~ 165 (347)
T 3hfq_A 96 ARQLVYSANYHK-----GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGS-----DKVY 165 (347)
T ss_dssp TTTEEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTT-----TEEE
T ss_pred CCCEEEEEeCCC-----CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCC-----CEEE
Confidence 44 577665322 467778774 3333333211 1111 11222333 66777765422 3688
Q ss_pred EEeCC-CCcEEEc
Q psy11771 303 KYDPK-LNKWQLL 314 (347)
Q Consensus 303 ~yd~~-~~~W~~~ 314 (347)
+||.. +.+...+
T Consensus 166 ~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 166 VYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEECTTSCEEEE
T ss_pred EEEECCCCcEEEe
Confidence 88887 5555543
No 111
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=93.32 E-value=3.5 Score=39.52 Aligned_cols=146 Identities=11% Similarity=0.026 Sum_probs=83.2
Q ss_pred CeEEEEeCC-CC---cEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCc----
Q psy11771 158 SSMERYDPL-TG---VWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRS---- 228 (347)
Q Consensus 158 ~~~~~~d~~-~~---~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---- 228 (347)
.+++++|.. +. +...+..-. .......+. -++++|+.+..++ ...++.+|+.+.++..+.+......
T Consensus 217 ~~i~~~d~~~~g~~~~~~~l~~~~-~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w 292 (662)
T 3azo_A 217 TELKTARVTEDGRFADTRTLLGGP-EEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLW 292 (662)
T ss_dssp EEEEEEEECTTSCEEEEEEEEEET-TBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCC
T ss_pred cEEEEEEECCCCcccccEEeCCCC-CceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccc
Confidence 468899988 46 333332111 111122222 2677777765432 2479999998888988765322110
Q ss_pred ---ceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEE-EEECCEEEEEeccCCCCCccEEEE
Q psy11771 229 ---SCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEV-VNIEGYLLTMGGNDGSSSLNSVEK 303 (347)
Q Consensus 229 ---~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~-~~~~~~lyv~GG~~~~~~~~~v~~ 303 (347)
....+.. ++++++.+.. + ...++.+|..+.+.+.+..- .. ..... ..-++.+++..+... ....++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~-~---~~~l~~~d~~~~~~~~l~~~-~~-~~~~~~s~~~~~~~~~~~~~~--~~~~i~~ 364 (662)
T 3azo_A 293 TPGMRWFAPLANGLIAVVHGK-G---AAVLGILDPESGELVDAAGP-WT-EWAATLTVSGTRAVGVAASPR--TAYEVVE 364 (662)
T ss_dssp STTCCSEEECTTSCEEEEEBS-S---SCEEEEEETTTTEEEECCSS-CC-EEEEEEEEETTEEEEEEEETT--EEEEEEE
T ss_pred cccCceEeEeCCCEEEEEEEc-C---ccEEEEEECCCCcEEEecCC-CC-eEEEEEecCCCEEEEEEcCCC--CCCEEEE
Confidence 1123333 6777776654 2 36888999988887776432 11 11222 233666666654322 2346899
Q ss_pred EeCCCCcEEEcc
Q psy11771 304 YDPKLNKWQLLT 315 (347)
Q Consensus 304 yd~~~~~W~~~~ 315 (347)
+|..+.+.+.+.
T Consensus 365 ~d~~~g~~~~l~ 376 (662)
T 3azo_A 365 LDTVTGRARTIG 376 (662)
T ss_dssp EETTTCCEEEEE
T ss_pred EECCCCceEEee
Confidence 999988888774
No 112
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=93.11 E-value=3.9 Score=35.34 Aligned_cols=142 Identities=12% Similarity=0.087 Sum_probs=77.1
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCC-C-----CCCC-
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPS-M-----SSRR- 227 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~-~-----p~~r- 227 (347)
..+.++|+.+.+.........-....+++.. ++++|+.... ...+.+||+... .-..+.. . ....
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 143 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFC 143 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCS
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCCCCCCccccC
Confidence 3689999987765432111111122333333 6789998653 257899998754 2222211 0 1111
Q ss_pred cceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCC-------CCCCc-ceEEEEE-C-CEEEEEeccCCC
Q psy11771 228 SSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPM-------LSRRS-THEVVNI-E-GYLLTMGGNDGS 295 (347)
Q Consensus 228 ~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-------~~~~~-~~~~~~~-~-~~lyv~GG~~~~ 295 (347)
.-..++.. ++.||+..++. ...+.+||+....-..+... +.... -++++.- + +.||+....+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~-- 217 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN-- 217 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT--
T ss_pred CCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC--
Confidence 12234443 68999997521 26789999765544443211 11111 2334443 4 8999987542
Q ss_pred CCccEEEEEeCCCCcEEE
Q psy11771 296 SSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~ 313 (347)
+.|.+||+.+.+...
T Consensus 218 ---~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 218 ---GRIQCFKTDTKEFVR 232 (329)
T ss_dssp ---TEEEEEETTTCCEEE
T ss_pred ---CEEEEEECCCCcEEE
Confidence 479999998666543
No 113
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=93.10 E-value=1.2 Score=38.60 Aligned_cols=154 Identities=16% Similarity=0.235 Sum_probs=77.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCC--CcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLT--GVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~--~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
+++.++.|+.+ ..+.++|... ..++.+..+.........+.. ++.+++.|+.+ ..+..||..+..|
T Consensus 118 ~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D-----~~i~iW~~~~~~~ 187 (330)
T 2hes_X 118 DGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD-----DTVRIWKDYDDDW 187 (330)
T ss_dssp TSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC-----CeEEEEECCCCCe
Confidence 56777777755 3577888743 233332222221111222222 45666667644 4577788777777
Q ss_pred EecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCC------CeEEEcCCCCCC-CcceEEEEE-CCE
Q psy11771 218 APVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRR------NSWEPIAPMLSR-RSTHEVVNI-EGY 285 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~------~~W~~~~~~~~~-~~~~~~~~~-~~~ 285 (347)
..+..+.........+.+ + +...+.|+.+ ..+..||..+ ..|.....++.. ......+.+ .+.
T Consensus 188 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D-----~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~ 262 (330)
T 2hes_X 188 ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD-----STVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG 262 (330)
T ss_dssp EEEEEECCCSSCEEEEEECCSSSSCEEEEEETT-----SCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS
T ss_pred eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC-----CeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC
Confidence 665443321111222222 2 3455566654 3455555432 346554444321 111222333 445
Q ss_pred EEEEeccCCCCCccEEEEEeCCCCcEEEcc
Q psy11771 286 LLTMGGNDGSSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 286 lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 315 (347)
+++.||.++ .+.+||..+.+|+.+.
T Consensus 263 ~l~s~~~dg-----~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 263 LIASVGADG-----VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp CEEEEETTS-----CEEEEEEETTEEEEEE
T ss_pred EEEEEeCCC-----EEEEEEcCCCceEEEe
Confidence 666676543 5888998888887654
No 114
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=92.92 E-value=2.6 Score=36.94 Aligned_cols=132 Identities=18% Similarity=0.233 Sum_probs=67.4
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+..++.|+.+ ..+..+|..+.+....-. ...... +++.. ++..++.|+.+ ..+..||..+.+-...
T Consensus 210 g~~l~sgs~D-----g~v~~wd~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~s~s~D-----~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 210 GNTFVSGGCD-----KKAMVWDMRSGQCVQAFE--THESDVNSVRYYPSGDAFASGSDD-----ATCRLYDLRADREVAI 277 (354)
T ss_dssp CCEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred CCEEEEEeCC-----CeEEEEECCCCcEEEEec--CCCCCeEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE
Confidence 4677777755 358888988876433211 111111 22222 55666777644 4588899887643222
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccC
Q psy11771 221 PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGND 293 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~ 293 (347)
-...........+.+ ++.+.+.|+.+ ..+..||..+.+- +..+.........+.+ +++.++.|+.+
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~~l~~g~~d-----~~i~vwd~~~~~~--~~~l~~h~~~v~~l~~spdg~~l~sgs~D 347 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGRLLFAGYND-----YTINVWDVLKGSR--VSILFGHENRVSTLRVSPDGTAFCSGSWD 347 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCSE--EEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred EcCCCcccceeEEEEeCCCCEEEEEECC-----CcEEEEECCCCce--EEEEECCCCcEEEEEECCCCCEEEEEcCC
Confidence 111111222223333 56777777654 4788899866542 1111111112223333 56777777754
No 115
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=92.86 E-value=2.1 Score=34.43 Aligned_cols=103 Identities=16% Similarity=0.199 Sum_probs=61.3
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCC--CcEEe--c----CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCe
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRM--GKWAP--V----PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSS 253 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~--~~W~~--~----~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 253 (347)
+++..++++|+|-| +.+|+++... ..... + +.+|.... ++... ++++|++-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~ID--Aa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRKLD--SVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSCS--EEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCCcc--EEEEECCCCeEEEEeC-------CE
Confidence 45567999999987 6688887755 22221 1 34554322 23333 688999988 57
Q ss_pred EEEEECCCCeE-EEcC--CCCCC--CcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 254 GERFNVRRNSW-EPIA--PMLSR--RSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 254 v~~yd~~~~~W-~~~~--~~~~~--~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
.|+|+..+-.- +.+. .+|.. ...++....++++|+|-| +..+.||..++
T Consensus 75 yw~~~~~~~~~Pk~i~~~G~p~~~~~iDAA~~~~~g~~yfFkg-------~~ywr~d~~~~ 128 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKLGLGADVAQVTGALRSGRGKMLLFSG-------RRLWRFDVKAQ 128 (195)
T ss_dssp EEEEETTEEEEEEEGGGGTCCTTCCCCCEEEECSTTEEEEEET-------TEEEEEETTTT
T ss_pred EEEEcCCccCCCEEeeecccCCCccceeEEEEcCCCeEEEEeC-------CEEEEEeCCcc
Confidence 88887543211 1122 22321 233333323789999987 47899998765
No 116
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.84 E-value=1.4 Score=38.92 Aligned_cols=151 Identities=13% Similarity=0.002 Sum_probs=79.2
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCE-EEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENC-LYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA 234 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 234 (347)
..++.+|..+.+...+... .......... +++ |++............++.+|..+..+..+.. ..+........
T Consensus 168 ~~l~~~d~~~g~~~~~~~~--~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~ 244 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD--TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HAEGESCTHEF 244 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE--SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CCTTEEEEEEE
T ss_pred ceEEEEECCCCcEEeeccC--CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cCCCccccceE
Confidence 4688999988876655421 1111222222 243 5444321111122578999998887777655 22111122222
Q ss_pred E--CCE-EEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCC-----------CCCcc
Q psy11771 235 L--DGA-IYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDG-----------SSSLN 299 (347)
Q Consensus 235 ~--~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~-----------~~~~~ 299 (347)
+ +++ |+..+ .........++.+|+.+.+...+...+. .. ....- +++++++.+... .....
T Consensus 245 ~spdg~~l~~~~-~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 245 WIPDGSAMAYVS-YFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp ECTTSSCEEEEE-EETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ECCCCCEEEEEe-cCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 2 454 44443 2222212349999999887776654442 11 22233 677666654210 01235
Q ss_pred EEEEEeCCCCcEEEcc
Q psy11771 300 SVEKYDPKLNKWQLLT 315 (347)
Q Consensus 300 ~v~~yd~~~~~W~~~~ 315 (347)
.++.+|+.+.+...+.
T Consensus 321 ~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 321 FLYVLNTKAKSAQKLC 336 (396)
T ss_dssp EEEEEETTTTBCCEEE
T ss_pred cEEEEecccCceEEcc
Confidence 7999999888766554
No 117
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=92.79 E-value=1.9 Score=37.96 Aligned_cols=150 Identities=11% Similarity=0.034 Sum_probs=76.3
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccce-EEEE-ECCE-EEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYC-RIAV-VENC-LYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA 234 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~ 234 (347)
..++.+|..+.++..+.. ..+.... ..+. -+++ |++.+ .........++.+|+.+.+...+...+. .. ....
T Consensus 216 ~~l~~~d~~~~~~~~l~~-~~~~~~~~~~~~spdg~~l~~~~-~~~~~~~~~l~~~d~~~g~~~~l~~~~~--~~-~~~s 290 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKE-HAEGESCTHEFWIPDGSAMAYVS-YFKGQTDRVIYKANPETLENEEVMVMPP--CS-HLMS 290 (396)
T ss_dssp CCCEEEETTSCCCEESSC-CCTTEEEEEEEECTTSSCEEEEE-EETTTCCEEEEEECTTTCCEEEEEECCS--EE-EEEE
T ss_pred ceEEEEECCCCceeEeec-cCCCccccceEECCCCCEEEEEe-cCCCCccceEEEEECCCCCeEEeeeCCC--CC-CCcc
Confidence 568999998887776654 2111111 1222 2444 44442 2211222459999999887776654442 11 2233
Q ss_pred E-CCEEEEEcccCC-----------CccCCeEEEEECCCCeEEEcCCCCCCC----------cceEEEEECC-EEEEEec
Q psy11771 235 L-DGAIYCVGGNDG-----------TMCMSSGERFNVRRNSWEPIAPMLSRR----------STHEVVNIEG-YLLTMGG 291 (347)
Q Consensus 235 ~-~~~iyv~GG~~~-----------~~~~~~v~~yd~~~~~W~~~~~~~~~~----------~~~~~~~~~~-~lyv~GG 291 (347)
- +++++++++... ......++.+|+.+.+...+...+... .......-++ .|+....
T Consensus 291 ~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~ 370 (396)
T 3c5m_A 291 NFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSD 370 (396)
T ss_dssp CSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEEC
T ss_pred CCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEec
Confidence 3 677666544211 012367999999887765553322110 1111122245 4444433
Q ss_pred cCCCCCccEEEEEeCCCCcEEEcc
Q psy11771 292 NDGSSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W~~~~ 315 (347)
..+ ...++.+|..+..++.+.
T Consensus 371 ~~~---~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 371 FEG---VPAIYIADVPESYKHLEH 391 (396)
T ss_dssp TTS---SCEEEEEECCTTCC----
T ss_pred CCC---CceEEEEEEccccccccc
Confidence 222 347999998888776653
No 118
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=92.68 E-value=3.6 Score=33.74 Aligned_cols=141 Identities=14% Similarity=0.126 Sum_probs=76.5
Q ss_pred EEEE-ECCEEEEEcccCCCCCCCeEEEEeCCCCcE--EeC----CCCCCCccceEEEEECCEEEEEcCcCCCCccceEEE
Q psy11771 137 GTCS-FDGLLYACGGYDGASCLSSMERYDPLTGVW--SSC----PAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 137 ~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W--~~~----~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 209 (347)
+++. .++++|+|=| +.+|+++.....+ ..+ +.+|. .-. ++...++++|+|-| +..|+
T Consensus 22 Ai~~~~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~wpgLP~-~ID-AA~~~~~~~yfFkG-------~~yw~ 85 (219)
T 1hxn_A 22 AMVSDNHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQWPQGPS-TVD-AAFSWEDKLYLIQD-------TKVYV 85 (219)
T ss_dssp EEEECTTSCEEEEET-------TEEEESSSSSCTTCCEEGGGTCTTSCS-SCS-EEEEETTEEEEEET-------TEEEE
T ss_pred EEEECCCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhhccCCCC-Ccc-EEEEECCcEEEecC-------CEEEE
Confidence 3444 5889999977 4566666433221 011 22332 122 22334899999987 67899
Q ss_pred EeCCCC-cE-----EecC---CCCCC--CcceEEEE-E--CCEEEEEcccCCCccCCeEEEEECCC---CeEEEcCCCCC
Q psy11771 210 LDPRMG-KW-----APVP---SMSSR--RSSCGVAA-L--DGAIYCVGGNDGTMCMSSGERFNVRR---NSWEPIAPMLS 272 (347)
Q Consensus 210 yd~~~~-~W-----~~~~---~~p~~--r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~~~ 272 (347)
|+..++ +- ..+. .+|.. .....+|. . ++++|++-| +..|+||..+ ..|...+.+|.
T Consensus 86 ~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~P~~i~~~~~g~p~ 158 (219)
T 1hxn_A 86 FLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKSGAQATWTELPWPHE 158 (219)
T ss_dssp EECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGGGGGCCCEEECCSCS
T ss_pred EeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCCCceEhhhcCCCCCC
Confidence 986532 11 1111 23433 11223333 2 589999988 6789999654 23443333222
Q ss_pred CCcceEEEE-----------ECCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 273 RRSTHEVVN-----------IEGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 273 ~~~~~~~~~-----------~~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
. ..++... .++.+|.|-| +..+.||..+
T Consensus 159 ~-vdAa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~~ 197 (219)
T 1hxn_A 159 K-VDGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHVD 197 (219)
T ss_dssp C-CSEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSHH
T ss_pred C-cCEEEEccccccccceeccCCeEEEEEC-------CEEEEEeCCc
Confidence 2 2222221 3467999988 3677777643
No 119
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=92.68 E-value=0.55 Score=40.63 Aligned_cols=111 Identities=18% Similarity=0.192 Sum_probs=57.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE---CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV---ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
+++.++.|+.+ ..+.+||..++....+..+....... +++.. ++.+++.|+.+ ..+..||..+.+|
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D-----~~v~iWd~~~~~~ 93 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD-----RKVIIWREENGTW 93 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT-----SCEEEECCSSSCC
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC-----CEEEEEECCCCcc
Confidence 56677777754 45777887665432222222111111 22221 24566666643 5688899887766
Q ss_pred EecCCCCCCCc-ceEEEEE-C--CEEEEEcccCCCccCCeEEEEECCCC-eEEEc
Q psy11771 218 APVPSMSSRRS-SCGVAAL-D--GAIYCVGGNDGTMCMSSGERFNVRRN-SWEPI 267 (347)
Q Consensus 218 ~~~~~~p~~r~-~~~~~~~-~--~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~ 267 (347)
.....+..... -.+++.. + +.+++.|+.+ ..+..||..+. .|...
T Consensus 94 ~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 94 EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp CEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCEEEC
T ss_pred eEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCccee
Confidence 54332221111 1222222 2 5667777765 45777777654 57543
No 120
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=92.56 E-value=5 Score=35.56 Aligned_cols=150 Identities=13% Similarity=0.099 Sum_probs=74.6
Q ss_pred EEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC-CCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec-
Q psy11771 144 LLYACGGYDGASCLSSMERYDPLTGVWSSCPA-MTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV- 220 (347)
Q Consensus 144 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~- 220 (347)
.+++.|+.+ ..+.++|..+.+....-. ......-.+++.. ++..++.|+.+ ..+..||+.+.+-...
T Consensus 145 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~ 214 (402)
T 2aq5_A 145 NVLLSAGCD-----NVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVAEK 214 (402)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCC-----CEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceeeee
Confidence 577777755 358889998876532211 1111111222222 56666666643 5689999987664322
Q ss_pred -CCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeE-EEcCCCCCCCcceEEEEE-C-CEEEEEeccCCCC
Q psy11771 221 -PSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSW-EPIAPMLSRRSTHEVVNI-E-GYLLTMGGNDGSS 296 (347)
Q Consensus 221 -~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~ 296 (347)
......+.......-++.++++|..... -..+..||..+..- .....+........++.. + ..|++.|+.++
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~l~~g~~~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg-- 290 (402)
T 2aq5_A 215 DRPHEGTRPVHAVFVSEGKILTTGFSRMS--ERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS-- 290 (402)
T ss_dssp ECSSCSSSCCEEEECSTTEEEEEEECTTC--CEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS--
T ss_pred ccCCCCCcceEEEEcCCCcEEEEeccCCC--CceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC--
Confidence 1111221222223346777777621111 15788899876431 001111111112222223 3 45666665432
Q ss_pred CccEEEEEeCCCCc
Q psy11771 297 SLNSVEKYDPKLNK 310 (347)
Q Consensus 297 ~~~~v~~yd~~~~~ 310 (347)
.+.+||..+.+
T Consensus 291 ---~i~i~d~~~~~ 301 (402)
T 2aq5_A 291 ---SIRYFEITSEA 301 (402)
T ss_dssp ---CEEEEEECSST
T ss_pred ---eEEEEEecCCC
Confidence 58888887765
No 121
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=92.52 E-value=5.5 Score=37.28 Aligned_cols=139 Identities=14% Similarity=0.107 Sum_probs=74.5
Q ss_pred CEEEEEccc-CCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 143 GLLYACGGY-DGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 143 ~~lyv~GG~-~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+..++.|+. + ..+..||..+.+... ..+............ +++.++.|+.+ ..+..||..+.+-..
T Consensus 456 ~~~l~~~~~~d-----~~i~~~~~~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d-----g~i~iw~~~~~~~~~ 524 (615)
T 1pgu_A 456 QNYVAVGLEEG-----NTIQVFKLSDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM-----GKILLYDLQSREVKT 524 (615)
T ss_dssp SSEEEEEETTT-----SCEEEEETTEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEeecCC-----CeEEEEECCCccccc-cccCCccCceEEEEECCCCCEEEEcCCC-----CeEEEeeCCCCccee
Confidence 555566664 3 458889988876643 222222222222333 66777777643 458889998765433
Q ss_pred cCCCCC-CCcceEEEEE------------CCEEEEEcccCCCccCCeEEEEECCCC--eEEEcCCCCCCCcceEEE--EE
Q psy11771 220 VPSMSS-RRSSCGVAAL------------DGAIYCVGGNDGTMCMSSGERFNVRRN--SWEPIAPMLSRRSTHEVV--NI 282 (347)
Q Consensus 220 ~~~~p~-~r~~~~~~~~------------~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~--~~ 282 (347)
.+.. .......+.+ ++.+.+.|+.+ ..+..||..+. ....+..- ......+ .-
T Consensus 525 --~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~h---~~~v~~l~~s~ 594 (615)
T 1pgu_A 525 --SRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLD-----TNIFIYSVKRPMKIIKALNAH---KDGVNNLLWET 594 (615)
T ss_dssp --CCSCCCSSCEEEEEECCCC------CCSCCEEEEEETT-----SCEEEEESSCTTCCEEETTSS---TTCEEEEEEEE
T ss_pred --EeecCCCCceeEEEEcCccccccccccCCCEEEEEcCC-----CcEEEEECCCCceechhhhcC---ccceEEEEEcC
Confidence 2221 1122222333 67777777765 47889998875 22222211 1222222 23
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
+++ ++.+|.++ .+.+||.++
T Consensus 595 ~~~-l~s~~~d~-----~v~iw~~~~ 614 (615)
T 1pgu_A 595 PST-LVSSGADA-----CIKRWNVVL 614 (615)
T ss_dssp TTE-EEEEETTS-----CEEEEEEC-
T ss_pred CCC-eEEecCCc-----eEEEEeeec
Confidence 788 77777543 477777654
No 122
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.51 E-value=2.6 Score=37.53 Aligned_cols=133 Identities=14% Similarity=0.167 Sum_probs=71.9
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEEC
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALD 236 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~ 236 (347)
..+.+||..+++............-.+++.. ++..+++|+.+ ..+..||..+.+....-. ........+.++
T Consensus 113 ~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~--~~~~~v~~~~~~ 185 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA--GHQARVGCLSWN 185 (401)
T ss_dssp TEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC--CCSSCEEEEEEE
T ss_pred CeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec--CCCCceEEEEEC
Confidence 4688999988876544333222222223222 55666666543 468889988765433211 111222334446
Q ss_pred CEEEEEcccCCCccCCeEEEEECCCCe--EEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 237 GAIYCVGGNDGTMCMSSGERFNVRRNS--WEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 237 ~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+.+++.|+.+ ..+..||..... -..+... ......+.+ ++.+++.|+.++ .+.+||..+.+
T Consensus 186 ~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~ 250 (401)
T 4aez_A 186 RHVLSSGSRS-----GAIHHHDVRIANHQIGTLQGH---SSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSI 250 (401)
T ss_dssp TTEEEEEETT-----SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSS
T ss_pred CCEEEEEcCC-----CCEEEEecccCcceeeEEcCC---CCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCC
Confidence 6677777754 578889987332 1111111 111222333 567777777543 58888887654
No 123
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=92.46 E-value=0.61 Score=42.40 Aligned_cols=145 Identities=10% Similarity=0.062 Sum_probs=75.6
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC-CCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT-TRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++.+++.|+.++ .+.++|..+..-...-.+. ....-.+++.. ++..++.|+.+ ..+..||..++...
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D-----~~v~iwd~~~~~~~ 200 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME-----GTTRLQDFKGNILR 200 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS-----SCEEEEETTSCEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC-----CEEEEeeccCCcee
Confidence 567888888664 4788888766533222221 11122233332 45566666644 45788998887665
Q ss_pred ecCCCCCCC-cceEEE-EECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--C-CEEEEEeccC
Q psy11771 219 PVPSMSSRR-SSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--E-GYLLTMGGND 293 (347)
Q Consensus 219 ~~~~~p~~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~-~~lyv~GG~~ 293 (347)
.+....... ...++. .-++.+++.|+.+ ..+..||..... +..+..-......+.+ + +.+++.|+.+
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 201 VFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp EEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred EEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCc
Confidence 543322111 112222 2367777777764 468888886543 2222221222233444 2 3466666654
Q ss_pred CCCCccEEEEEeCCCC
Q psy11771 294 GSSSLNSVEKYDPKLN 309 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~ 309 (347)
+ .+.+||..+.
T Consensus 273 ~-----~v~iwd~~~~ 283 (435)
T 4e54_B 273 Q-----TVKIWDLRQV 283 (435)
T ss_dssp S-----BCCEEETTTC
T ss_pred c-----eeeEEecccc
Confidence 3 3556776543
No 124
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=92.40 E-value=0.73 Score=41.19 Aligned_cols=144 Identities=12% Similarity=0.113 Sum_probs=73.4
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceE-EEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCR-IAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~-~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
+..++.|+.+ ..+.+||..+.+- ...+........ +...+++.++.|+.+ ..+..||..+.+-...-
T Consensus 68 g~~l~~~~~d-----~~v~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~ 135 (420)
T 3vl1_A 68 GSHLYKARLD-----GHDFLFNTIIRDG--SKMLKRADYTAVDTAKLQMRRFILGTTE-----GDIKVLDSNFNLQREID 135 (420)
T ss_dssp ETTEEEEEET-----TEEEEEECCSEET--TTTSCSCCEEEEEEECSSSCEEEEEETT-----SCEEEECTTSCEEEEET
T ss_pred CCeEEEEEcC-----CcEEEEEecccce--eeEEecCCceEEEEEecCCCEEEEEECC-----CCEEEEeCCCcceeeec
Confidence 3444455543 4678888765432 222222222111 122366777777644 46888998876544332
Q ss_pred CCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCc
Q psy11771 222 SMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSL 298 (347)
Q Consensus 222 ~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~ 298 (347)
.. ....-.+++.. ++.+.+.|+.+ ..+..||..+.+-. ..+.........+.+ +++.++.|+.++
T Consensus 136 ~~-h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~---- 203 (420)
T 3vl1_A 136 QA-HVSEITKLKFFPSGEALISSSQD-----MQLKIWSVKDGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLDG---- 203 (420)
T ss_dssp TS-SSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCCC--EEEECCSSCEEEEEEETTTTEEEEEETTS----
T ss_pred cc-ccCccEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCCC----
Confidence 11 11112233322 56666677654 47889998765311 111111111222333 566667777543
Q ss_pred cEEEEEeCCCCcE
Q psy11771 299 NSVEKYDPKLNKW 311 (347)
Q Consensus 299 ~~v~~yd~~~~~W 311 (347)
.+.+||..+.+-
T Consensus 204 -~v~iwd~~~~~~ 215 (420)
T 3vl1_A 204 -TIRLWECGTGTT 215 (420)
T ss_dssp -CEEEEETTTTEE
T ss_pred -cEEEeECCCCce
Confidence 588899887653
No 125
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=92.35 E-value=5.1 Score=34.69 Aligned_cols=148 Identities=14% Similarity=0.023 Sum_probs=71.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEE-eC--CCCCCCccc--eEEEEECCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWS-SC--PAMTTRRRY--CRIAVVENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~--~~~~~~r~~--~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
++.+++.||.+ ..+.+||..+++-. .+ .....-... ...+..++.+.+... ...+..||..+.+
T Consensus 47 d~~~l~sg~~D-----g~v~iwd~~~~~~~~~~~~~~v~~~~~~~~~~s~s~D~~i~~w~~------~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCED-----GALHFTQLKDSKTITTITTPNPRTGGEHPAIISRGPCNRLLLLYP------GNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEET-----TEEEEEEESSSSCEEEEEEECCCTTCCCCSEEEECSTTEEEEEET------TTEEEEEETTTCC
T ss_pred CCCEEEEECCC-----CcEEEEECCCCcEEEEEecCCceeeeeCCceEEecCCCeEEEEEc------cCceEEeecCCcc
Confidence 56677777765 35677776655421 11 111000000 222222444444422 2355667776665
Q ss_pred EEecCCCCCCCcceEEEE-E--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEecc
Q psy11771 217 WAPVPSMSSRRSSCGVAA-L--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGN 292 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~ 292 (347)
-...........-.+++. - ++.+++.|+.+ ..+..||..+.+-..............++.. ++.+++.|+.
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~ 190 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSP 190 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECT
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcC
Confidence 221111111111122221 2 56677777754 4688999988765443322222122222222 6778888875
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
++ .+.+||..+.+
T Consensus 191 dg-----~i~iwd~~~~~ 203 (343)
T 3lrv_A 191 DG-----ILDVYNLSSPD 203 (343)
T ss_dssp TS-----CEEEEESSCTT
T ss_pred CC-----EEEEEECCCCC
Confidence 43 58889987765
No 126
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=92.33 E-value=2 Score=36.78 Aligned_cols=143 Identities=8% Similarity=0.005 Sum_probs=74.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcCCCCccceEEEEeCCCCcE--
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFDSTNYQASVERLDPRMGKW-- 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W-- 217 (347)
.+.+|+.++.+ ..+.++|+.+++....-..+.... .++.. ++ .+|+.+... ..++.||+.+.+.
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITLGYDFV--DTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEECCCCEE--EEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEccCCcc--eEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 45778876643 579999999888754333322111 33332 44 588876532 4789999988764
Q ss_pred EecCCCCCCCcceEEEE-EC-CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEeccC
Q psy11771 218 APVPSMSSRRSSCGVAA-LD-GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGND 293 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~-~~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~ 293 (347)
..+..-..+. .+++. -+ ..+| ++...+ ....+..||..+.+....- +.....+.++.. ++ .||+.+...
T Consensus 77 ~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~--~~~~~~~~~~~spdg~~l~~~~~~~ 149 (331)
T 3u4y_A 77 VAIQEGQSSM--ADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTI--PIPYDAVGIAISPNGNGLILIDRSS 149 (331)
T ss_dssp EEEEECSSCC--CCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEE--ECCTTEEEEEECTTSSCEEEEEETT
T ss_pred EecccCCCCc--cceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEE--ECCCCccceEECCCCCEEEEEecCC
Confidence 2222222222 21222 23 4566 433221 1138999999888754432 222222333333 44 477766532
Q ss_pred CCCCccEEEEEeCC
Q psy11771 294 GSSSLNSVEKYDPK 307 (347)
Q Consensus 294 ~~~~~~~v~~yd~~ 307 (347)
+ ..+.+|+..
T Consensus 150 ~----~~i~~~~~~ 159 (331)
T 3u4y_A 150 A----NTVRRFKID 159 (331)
T ss_dssp T----TEEEEEEEC
T ss_pred C----ceEEEEEEC
Confidence 2 125666644
No 127
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=92.18 E-value=4.2 Score=39.24 Aligned_cols=152 Identities=10% Similarity=0.026 Sum_probs=79.9
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccc-eEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCC-cEEecCCCCCCC----cce
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRY-CRIAV-VENCLYALGGFDSTNYQASVERLDPRMG-KWAPVPSMSSRR----SSC 230 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~-~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~~~p~~r----~~~ 230 (347)
..++++|..+.+-..+......... ..++. -+++..+++..+.......++.+|+.+. ....+....... ...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~ 314 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHP 314 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSC
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCC
Confidence 4689999988876555432211122 22222 2554333333333333468899999887 665543211110 011
Q ss_pred EEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEeccCCCCCccEEEEEe
Q psy11771 231 GVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EG-YLLTMGGNDGSSSLNSVEKYD 305 (347)
Q Consensus 231 ~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~GG~~~~~~~~~v~~yd 305 (347)
....- ++++++.+..++ ...++.+|........+..-.... ...+.+ ++ .||+.+..++ .....++.+|
T Consensus 315 ~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~~~~~~v--~~~~~~spdg~~l~~~~~~~~-~~~~~l~~~d 388 (706)
T 2z3z_A 315 LTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVTKGEWEV--TNFAGFDPKGTRLYFESTEAS-PLERHFYCID 388 (706)
T ss_dssp CEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECCCSSSCE--EEEEEECTTSSEEEEEESSSC-TTCBEEEEEE
T ss_pred ceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecCCCCeEE--EeeeEEcCCCCEEEEEecCCC-CceEEEEEEE
Confidence 12223 677655554332 367888997777777765422111 122333 34 5666554322 1235788999
Q ss_pred CCCCcEEEcc
Q psy11771 306 PKLNKWQLLT 315 (347)
Q Consensus 306 ~~~~~W~~~~ 315 (347)
..+.+.+.+.
T Consensus 389 ~~~~~~~~l~ 398 (706)
T 2z3z_A 389 IKGGKTKDLT 398 (706)
T ss_dssp TTCCCCEESC
T ss_pred cCCCCceecc
Confidence 8887766654
No 128
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=92.15 E-value=4.2 Score=34.43 Aligned_cols=148 Identities=10% Similarity=-0.052 Sum_probs=76.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC-cEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG-KWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~ 218 (347)
.+++++.|..+ ..+.++|+.+.+ |+.-..-. ...+......++++++.+ ...+..||+..+ .|+
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~~~~-~~~~~~~~~pdG~ilvs~-------~~~V~~~d~~G~~~W~ 70 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPLEKG-WECNSVAATKAGEILFSY-------SKGAKMITRDGRELWN 70 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEECCTT-CCCCEEEECTTSCEEEEC-------BSEEEEECTTSCEEEE
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCCCcc-CCCcCeEECCCCCEEEeC-------CCCEEEECCCCCEEEE
Confidence 35677776543 568889987775 65433211 122333334477888843 256899999322 476
Q ss_pred ecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCC-eEEEc-C-CCCC--CCcceEEEEECCEEEEEecc
Q psy11771 219 PVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPI-A-PMLS--RRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~-~-~~~~--~~~~~~~~~~~~~lyv~GG~ 292 (347)
.-.+ .....+++.. .++.+++..+.. ...++.+|++.. .|+.- . ..+. ..........++.+++....
T Consensus 71 ~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 71 IAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp EECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred EcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 5432 1112233333 367776664421 146788888554 24432 1 1111 11111222336666665432
Q ss_pred CCCCCccEEEEEeCCCC-cEEE
Q psy11771 293 DGSSSLNSVEKYDPKLN-KWQL 313 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~-~W~~ 313 (347)
...+.+||++-+ .|+.
T Consensus 145 -----~~~v~~~d~~G~~~w~~ 161 (276)
T 3no2_A 145 -----TSEVREIAPNGQLLNSV 161 (276)
T ss_dssp -----TTEEEEECTTSCEEEEE
T ss_pred -----CCEEEEECCCCCEEEEE
Confidence 246889988733 2654
No 129
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=92.13 E-value=1.8 Score=38.65 Aligned_cols=144 Identities=17% Similarity=0.152 Sum_probs=73.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+++.++.|+.+ ..+.++|..+.+-...-.- ....-.+++.. ++..++.|+.+ ..+..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 56777777755 3588889887754322111 11111222222 44455555533 5688899987764432
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEE-cCCCC---CC-CcceEEEEE--CCEEEEEec
Q psy11771 221 PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IAPML---SR-RSTHEVVNI--EGYLLTMGG 291 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~~---~~-~~~~~~~~~--~~~lyv~GG 291 (347)
-..... ..+++.. ++.+++.|+.+ ..+..||..+..-.. +.... .. ......+.+ +++.++.|+
T Consensus 203 ~~~~~~--v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s 275 (393)
T 1erj_A 203 LSIEDG--VTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 275 (393)
T ss_dssp EECSSC--EEEEEECSTTCCEEEEEETT-----SCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred EEcCCC--cEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe
Confidence 221111 1222222 56777777765 468888988765322 21111 11 111223333 566777777
Q ss_pred cCCCCCccEEEEEeCCC
Q psy11771 292 NDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~ 308 (347)
.+ ..+.+||..+
T Consensus 276 ~d-----~~v~~wd~~~ 287 (393)
T 1erj_A 276 LD-----RSVKLWNLQN 287 (393)
T ss_dssp TT-----SEEEEEEC--
T ss_pred CC-----CEEEEEECCC
Confidence 54 3577887654
No 130
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.13 E-value=1.2 Score=39.38 Aligned_cols=140 Identities=11% Similarity=0.010 Sum_probs=70.6
Q ss_pred EEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcE-Ee
Q psy11771 144 LLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKW-AP 219 (347)
Q Consensus 144 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~ 219 (347)
.+++.||.+ ..+.++|..+.+-...-......... +++.. ++.+++.|+.+ ..+..||..+.+- ..
T Consensus 195 ~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d-----~~i~~wd~~~~~~~~~ 264 (357)
T 4g56_B 195 TIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDET-----GNVSLVNIKNPDSAQT 264 (357)
T ss_dssp SCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESS-----SCEEEEESSCGGGCEE
T ss_pred ceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecc-----cceeEEECCCCcEeEE
Confidence 466666644 34777887766532222222222222 22222 35677777643 4578888876431 11
Q ss_pred cCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEeccCC
Q psy11771 220 VPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI---EGYLLTMGGNDG 294 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~ 294 (347)
+..... .-.+++. .++ ++.+.|+.+ ..+..||..+.+-...-. .. .....+.+ ++++++.||.++
T Consensus 265 ~~~~~~--~v~~l~~sp~~~~~lasgs~D-----~~i~iwd~~~~~~~~~~~--H~-~~V~~vafsP~d~~~l~s~s~Dg 334 (357)
T 4g56_B 265 SAVHSQ--NITGLAYSYHSSPFLASISED-----CTVAVLDADFSEVFRDLS--HR-DFVTGVAWSPLDHSKFTTVGWDH 334 (357)
T ss_dssp ECCCSS--CEEEEEECSSSSCCEEEEETT-----SCEEEECTTSCEEEEECC--CS-SCEEEEEECSSSTTEEEEEETTS
T ss_pred Eeccce--eEEEEEEcCCCCCEEEEEeCC-----CEEEEEECCCCcEeEECC--CC-CCEEEEEEeCCCCCEEEEEcCCC
Confidence 111111 1122222 233 555566654 468889998876543321 11 11223333 577788888654
Q ss_pred CCCccEEEEEeCCC
Q psy11771 295 SSSLNSVEKYDPKL 308 (347)
Q Consensus 295 ~~~~~~v~~yd~~~ 308 (347)
.|.+||..+
T Consensus 335 -----~v~iW~~~~ 343 (357)
T 4g56_B 335 -----KVLHHHLPS 343 (357)
T ss_dssp -----CEEEEECC-
T ss_pred -----eEEEEECCC
Confidence 477887644
No 131
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=92.11 E-value=1.6 Score=38.53 Aligned_cols=147 Identities=15% Similarity=0.087 Sum_probs=67.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC---CCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT---TRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
++.++ .|+.+ ..+.++|..+++-....... ....-.+++.. +++.++.|+.+ ..+..||..+.+-
T Consensus 105 d~~~l-~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~~ 173 (357)
T 4g56_B 105 EKGIL-VASDS-----GAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKAV 173 (357)
T ss_dssp TTEEE-EEETT-----SCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTEE
T ss_pred CCCEE-EEECC-----CEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 45554 45543 34777887765432221111 11111222222 56666777644 4588899887754
Q ss_pred EecCCCCCCCcceEEEEE-C-CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEecc
Q psy11771 218 APVPSMSSRRSSCGVAAL-D-GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI---EGYLLTMGGN 292 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~-~-~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~GG~ 292 (347)
...-...... ..+++.. + +.+++.||.+ ..+..||..+.+-..............++.+ ++.+++.|+.
T Consensus 174 ~~~~~~h~~~-v~~v~~s~~~~~~~~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 174 LKSYNAHSSE-VNCVAACPGKDTIFLSCGED-----GRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp EEEECCCSSC-EEEEEECTTCSSCEEEEETT-----SCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred EEEEcCCCCC-EEEEEEccCCCceeeeeccC-----CceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 3321111111 1222222 3 3466777654 4677888877643222222222222334444 3567777765
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
++ .+.+||..+.+
T Consensus 248 d~-----~i~~wd~~~~~ 260 (357)
T 4g56_B 248 TG-----NVSLVNIKNPD 260 (357)
T ss_dssp SS-----CEEEEESSCGG
T ss_pred cc-----ceeEEECCCCc
Confidence 43 47778876543
No 132
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=92.10 E-value=5.9 Score=34.92 Aligned_cols=147 Identities=12% Similarity=0.177 Sum_probs=75.8
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
.++.+++.|+.+ ..+.+||..... ...+..-... -.+++.. ++..++.|+.+ ..+..||..+.+-
T Consensus 216 ~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h~~~--v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 216 LNANMFISGSCD-----TTVRLWDLRITSRAVRTYHGHEGD--INSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQ 283 (380)
T ss_dssp SSCCEEEEEETT-----SCEEEEETTTTCCCCEEECCCSSC--CCEEEECTTSSEEEEECSS-----SCEEEEETTTTEE
T ss_pred CCCCEEEEEECC-----CeEEEEECCCCCcceEEECCcCCC--eEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcE
Confidence 367788888865 357888876321 1111111111 1122222 56667777654 4588899887653
Q ss_pred Eec-CCCCC----CC-cceEEE-EECCEEEEEcccCCCccCCeEEEEECCCCeEE-EcCCCCCCCc-ceEEEEE--CCEE
Q psy11771 218 APV-PSMSS----RR-SSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWE-PIAPMLSRRS-THEVVNI--EGYL 286 (347)
Q Consensus 218 ~~~-~~~p~----~r-~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-~~~~~~~~~~-~~~~~~~--~~~l 286 (347)
... ...+. .. ...+++ ..++.+.+.|+.+ ..+..||..+.+-. .+..+..+.. ...++.+ +++.
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN-----GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred EEEecccccccccccCceEEEEECCCCCEEEEEECC-----CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 322 11110 00 112222 2367777777654 47889998776543 2322222211 1122333 6777
Q ss_pred EEEeccCCCCCccEEEEEeCCCC
Q psy11771 287 LTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 287 yv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
++.|+.++ .+.+||....
T Consensus 359 l~sgs~D~-----~i~iW~~~~~ 376 (380)
T 3iz6_a 359 LCTGSWDK-----NLKIWAFSGH 376 (380)
T ss_dssp EEEECTTS-----CEEEEECCSS
T ss_pred EEEeeCCC-----CEEEEecCCC
Confidence 88887654 4777776543
No 133
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=92.06 E-value=3.8 Score=35.50 Aligned_cols=142 Identities=7% Similarity=0.013 Sum_probs=75.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEE-EEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRI-AVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.+|+++... ..+++||+.+++..... .+. .-.++ ..-++++|+... ..+++||+.+.+.+.+
T Consensus 60 ~~~l~~~d~~~-----~~i~~~d~~~~~~~~~~-~~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNILE-----RELHELHLASGRKTVHA-LPF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGGG-----TEEEEEETTTTEEEEEE-CSS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECCC-----CEEEEEECCCCcEEEEE-CCC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 36888886532 46999999887655432 121 12222 234788887642 3589999998888766
Q ss_pred CCCCCC--CcceEEEE--ECCEEEEEccc-CCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEeccC
Q psy11771 221 PSMSSR--RSSCGVAA--LDGAIYCVGGN-DGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGND 293 (347)
Q Consensus 221 ~~~p~~--r~~~~~~~--~~~~iyv~GG~-~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~ 293 (347)
...+.. ........ -+|++|+.... ........+++|| +.+...+.. ......+.+.. ++ .||+....
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~--~~~~~~~i~~s~dg~~lyv~~~~- 199 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA--DISIPNSICFSPDGTTGYFVDTK- 199 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE--EESSEEEEEECTTSCEEEEEETT-
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC--CCcccCCeEEcCCCCEEEEEECC-
Confidence 543221 11122222 36788874321 1112235789999 456554421 00111122322 34 57776432
Q ss_pred CCCCccEEEEEeCC
Q psy11771 294 GSSSLNSVEKYDPK 307 (347)
Q Consensus 294 ~~~~~~~v~~yd~~ 307 (347)
.+.+++||..
T Consensus 200 ----~~~I~~~d~~ 209 (326)
T 2ghs_A 200 ----VNRLMRVPLD 209 (326)
T ss_dssp ----TCEEEEEEBC
T ss_pred ----CCEEEEEEcc
Confidence 2467777764
No 134
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=92.01 E-value=2.1 Score=41.03 Aligned_cols=120 Identities=17% Similarity=0.214 Sum_probs=70.5
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeC-CCC--cEEecCCCCCC-----C---cceEEEE--ECCE----EEEEcccC
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDP-RMG--KWAPVPSMSSR-----R---SSCGVAA--LDGA----IYCVGGND 246 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~-~~~--~W~~~~~~p~~-----r---~~~~~~~--~~~~----iyv~GG~~ 246 (347)
+-+..++.||+.+.. ...++++|. .+. .|+.-...+.. + ...+.++ .+++ ||+....
T Consensus 57 tP~v~~g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~d- 130 (599)
T 1w6s_A 57 APLVVDGKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLD- 130 (599)
T ss_dssp CCEEETTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTT-
T ss_pred ccEEECCEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCC-
Confidence 345679999998652 246899998 665 59876543321 1 1123344 5777 8876432
Q ss_pred CCccCCeEEEEECCCC--eEEEcCCCCC-C-CcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 247 GTMCMSSGERFNVRRN--SWEPIAPMLS-R-RSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 247 ~~~~~~~v~~yd~~~~--~W~~~~~~~~-~-~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
..++++|.++. .|+.-..-+. . ....+-++.+++||+-.+..+......+.+||.++.+ |+.-
T Consensus 131 -----g~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 131 -----GNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp -----SEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred -----CEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 57999998776 4875432111 1 1112234568888774321111123579999998765 8754
No 135
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=92.00 E-value=2.3 Score=37.41 Aligned_cols=143 Identities=11% Similarity=0.056 Sum_probs=74.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCcc-ceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRR-YCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~-~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.++|..++............. -.+++.. ++..++.|+.+ ..+..||.....-..
T Consensus 130 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~ 199 (383)
T 3ei3_B 130 NTNQLFVSSIR-----GATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFK 199 (383)
T ss_dssp EEEEEEEEETT-----TEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEE
Confidence 44677777654 468888988766655433221111 1222222 55666666643 568889986544433
Q ss_pred cCCCCCCCcceEEEEE-CCE-EEEEcccCCCccCCeEEEEECCC----CeEEEcCCCCCCCcceEEEEE---CCEEEEEe
Q psy11771 220 VPSMSSRRSSCGVAAL-DGA-IYCVGGNDGTMCMSSGERFNVRR----NSWEPIAPMLSRRSTHEVVNI---EGYLLTMG 290 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~----~~W~~~~~~~~~~~~~~~~~~---~~~lyv~G 290 (347)
+..... .-.+++.. ++. +++.|+.+ ..+..||..+ ........ .. .....+.+ +++.++.|
T Consensus 200 ~~~h~~--~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~--~~-~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 200 EKLHKA--KVTHAEFNPRCDWLMATSSVD-----ATVKLWDLRNIKDKNSYIAEMP--HE-KPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp EECSSS--CEEEEEECSSCTTEEEEEETT-----SEEEEEEGGGCCSTTCEEEEEE--CS-SCEEEEEECTTTSCEEEEE
T ss_pred eccCCC--cEEEEEECCCCCCEEEEEeCC-----CEEEEEeCCCCCcccceEEEec--CC-CceEEEEEcCCCCCEEEEE
Confidence 332111 11222222 344 67777654 4788888876 33222111 11 12223333 45667777
Q ss_pred ccCCCCCccEEEEEeCCCC
Q psy11771 291 GNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 291 G~~~~~~~~~v~~yd~~~~ 309 (347)
+.+ ..+.+||..+.
T Consensus 270 ~~d-----~~i~iwd~~~~ 283 (383)
T 3ei3_B 270 DQR-----NEIRVYSSYDW 283 (383)
T ss_dssp ESS-----SEEEEEETTBT
T ss_pred cCC-----CcEEEEECCCC
Confidence 653 36888887654
No 136
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=91.98 E-value=3.6 Score=36.91 Aligned_cols=64 Identities=13% Similarity=0.154 Sum_probs=34.9
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
++..++.|+.+ ..+..||..+..-... +.........+. -++.+++.|+.+ ..+..||..+.+.
T Consensus 203 ~~~~l~s~s~D-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRD-----KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCce
Confidence 45555666643 5688899887653221 111111112222 256777777764 4677788876654
No 137
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=91.92 E-value=2.9 Score=35.76 Aligned_cols=143 Identities=13% Similarity=0.135 Sum_probs=69.5
Q ss_pred EEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCC
Q psy11771 144 LLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPS 222 (347)
Q Consensus 144 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 222 (347)
.+++.||.+ ..+.++|..+.+....-.-... .-.+++.. ++++++.|+.+ ..+..||..+.+-.. .
T Consensus 186 ~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~~-~v~~~~~s~~~~~l~s~s~D-----g~i~iwd~~~~~~~~--~ 252 (340)
T 4aow_A 186 PIIVSCGWD-----KLVKVWNLANCKLKTNHIGHTG-YLNTVTVSPDGSLCASGGKD-----GQAMLWDLNEGKHLY--T 252 (340)
T ss_dssp CEEEEEETT-----SCEEEEETTTTEEEEEECCCSS-CEEEEEECTTSSEEEEEETT-----CEEEEEETTTTEEEE--E
T ss_pred cEEEEEcCC-----CEEEEEECCCCceeeEecCCCC-cEEEEEECCCCCEEEEEeCC-----CeEEEEEeccCceee--e
Confidence 345555543 3477888877654322111111 11122222 56677777644 467888887654322 1
Q ss_pred CCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEE-cCC-CC-----CCCcceEEEEE--CCEEEEEeccC
Q psy11771 223 MSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IAP-ML-----SRRSTHEVVNI--EGYLLTMGGND 293 (347)
Q Consensus 223 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~-~~-----~~~~~~~~~~~--~~~lyv~GG~~ 293 (347)
+.......+++...+..+++++.+ ..+..||..+..-.. +.. .. ........+.+ +++.++.||.+
T Consensus 253 ~~~~~~v~~~~~~~~~~~~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 327 (340)
T 4aow_A 253 LDGGDIINALCFSPNRYWLCAATG-----PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTD 327 (340)
T ss_dssp EECSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETT
T ss_pred ecCCceEEeeecCCCCceeeccCC-----CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCC
Confidence 111112223333334445555543 468888887764322 111 10 01111223333 56777777765
Q ss_pred CCCCccEEEEEeCCCC
Q psy11771 294 GSSSLNSVEKYDPKLN 309 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~ 309 (347)
+ .|.+||.+++
T Consensus 328 g-----~v~iW~~~tG 338 (340)
T 4aow_A 328 N-----LVRVWQVTIG 338 (340)
T ss_dssp S-----CEEEEEEEC-
T ss_pred C-----EEEEEeCCCc
Confidence 3 4888887765
No 138
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.89 E-value=3 Score=39.73 Aligned_cols=117 Identities=15% Similarity=0.252 Sum_probs=68.3
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCCC------cceEEEEECCEEEEEcccCCCccCCeEE
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSRR------SSCGVAALDGAIYCVGGNDGTMCMSSGE 255 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r------~~~~~~~~~~~iyv~GG~~~~~~~~~v~ 255 (347)
+.+..++.||+.... ..++++|..+. .|+.-...+... ...+.++.+++||+.... ..++
T Consensus 63 ~P~v~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~d------g~l~ 130 (582)
T 1flg_A 63 QAIVSDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTLD------ASVV 130 (582)
T ss_dssp CCEEETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEETT------TEEE
T ss_pred ccEEECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeCC------CEEE
Confidence 345679999998652 34899998775 488755433210 113345678999885321 5799
Q ss_pred EEECCCC--eEEEcCCCCCCC--cceEEEEECC------EEEEEeccC-CCCCccEEEEEeCCCCc--EEE
Q psy11771 256 RFNVRRN--SWEPIAPMLSRR--STHEVVNIEG------YLLTMGGND-GSSSLNSVEKYDPKLNK--WQL 313 (347)
Q Consensus 256 ~yd~~~~--~W~~~~~~~~~~--~~~~~~~~~~------~lyv~GG~~-~~~~~~~v~~yd~~~~~--W~~ 313 (347)
++|.++. .|+.-..-+... ...+-++.++ .||+ |... .......+++||+++.+ |+.
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9999876 487643221111 1112234455 6655 3211 11123579999998765 864
No 139
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=91.88 E-value=3 Score=35.36 Aligned_cols=149 Identities=6% Similarity=-0.030 Sum_probs=78.6
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
.+..++++++.+. +.+..||+ +.+ |+.-.+ .....+++... ++++++..... ...++.+|+..
T Consensus 43 ~~~pdG~ilvs~~-------~~V~~~d~-~G~~~W~~~~~--~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~G 108 (276)
T 3no2_A 43 AATKAGEILFSYS-------KGAKMITR-DGRELWNIAAP--AGCEMQTARILPDGNALVAWCGH----PSTILEVNMKG 108 (276)
T ss_dssp EECTTSCEEEECB-------SEEEEECT-TSCEEEEEECC--TTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTS
T ss_pred EECCCCCEEEeCC-------CCEEEECC-CCCEEEEEcCC--CCccccccEECCCCCEEEEecCC----CCEEEEEeCCC
Confidence 3445778888432 45889998 443 654331 11122233333 66666654321 24678888754
Q ss_pred C-cEEec--CCCCCC--CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC-eEEEcCCCCCCCcceEEEEE-CCEEE
Q psy11771 215 G-KWAPV--PSMSSR--RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPIAPMLSRRSTHEVVNI-EGYLL 287 (347)
Q Consensus 215 ~-~W~~~--~~~p~~--r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~-~~~ly 287 (347)
+ .|+.. ...+.. .........++.+++....+ ..+.+||++.+ .|+.-.+. ..+++... ++.++
T Consensus 109 k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~-----~~v~~~d~~G~~~w~~~~~~----~~~~~~~~~~g~~~ 179 (276)
T 3no2_A 109 EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFAT-----SEVREIAPNGQLLNSVKLSG----TPFSSAFLDNGDCL 179 (276)
T ss_dssp CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTT-----TEEEEECTTSCEEEEEECSS----CCCEEEECTTSCEE
T ss_pred CEEEEEeccCCCCcccccccCceECCCCCEEEEecCC-----CEEEEECCCCCEEEEEECCC----CccceeEcCCCCEE
Confidence 4 24432 111111 11122233466666654322 57999998733 47654431 12334444 67888
Q ss_pred EEeccCCCCCccEEEEEeCCCCc--EEEc
Q psy11771 288 TMGGNDGSSSLNSVEKYDPKLNK--WQLL 314 (347)
Q Consensus 288 v~GG~~~~~~~~~v~~yd~~~~~--W~~~ 314 (347)
+.+..+ ..+.++|+++.+ |+.-
T Consensus 180 v~~~~~-----~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 180 VACGDA-----HCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EECBTT-----SEEEEECTTTCCEEEEEE
T ss_pred EEeCCC-----CeEEEEeCcCCcEEEEec
Confidence 776542 369999998654 6653
No 140
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=91.88 E-value=1.9 Score=36.79 Aligned_cols=143 Identities=12% Similarity=0.026 Sum_probs=69.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEe-
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAP- 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~- 219 (347)
++.+++.|+.+ ..+.++|..+..-.. +.....+ ........+++.++.|+.+ ..+..||..+.+-..
T Consensus 24 ~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~~~~~-v~~~~~~~~~~~l~s~s~d-----~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 24 TEPWVLTTLYS-----GRVELWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVD 92 (304)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCceeEEeeccCCc-EEEEEEeCCCCEEEEECCC-----CEEEEEECCCCcEEEE
Confidence 56677777754 468888887765322 1111111 1111122245556666643 568889988765321
Q ss_pred cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI---EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~ 295 (347)
+.. ....-.+++. -++.+++.|+.+ ..+..||..++. .....+........++.+ ++.+++.|+.++
T Consensus 93 ~~~--h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~- 163 (304)
T 2ynn_A 93 FEA--HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR- 163 (304)
T ss_dssp EEC--CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETTS-
T ss_pred EeC--CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCCC-
Confidence 111 1111122222 245666777755 467788876541 111111111111223333 345677777543
Q ss_pred CCccEEEEEeCCC
Q psy11771 296 SSLNSVEKYDPKL 308 (347)
Q Consensus 296 ~~~~~v~~yd~~~ 308 (347)
.+.+||..+
T Consensus 164 ----~v~iwd~~~ 172 (304)
T 2ynn_A 164 ----TVKVWSLGQ 172 (304)
T ss_dssp ----EEEEEETTC
T ss_pred ----eEEEEECCC
Confidence 577777644
No 141
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.87 E-value=5.2 Score=33.79 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=80.0
Q ss_pred ECCEEEEEcccC--CCCCCCeEEEEeCCCCcEEeCCCC--C-CCccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeCC
Q psy11771 141 FDGLLYACGGYD--GASCLSSMERYDPLTGVWSSCPAM--T-TRRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 141 ~~~~lyv~GG~~--~~~~~~~~~~~d~~~~~W~~~~~~--~-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
.++.+|+.+... .......+.+||+.++++...... . ....-.+++.. + +++|+.... ..+.+||+.
T Consensus 27 ~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~------~~l~~~d~~ 100 (314)
T 1pjx_A 27 KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR------LGLLVVQTD 100 (314)
T ss_dssp TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT------TEEEEEETT
T ss_pred CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC------CCEEEEeCC
Confidence 367888882100 001124689999988887654320 0 11122233332 4 789987641 368999998
Q ss_pred CCcEEec-CCCCCC---CcceEEEE-ECCEEEEEcccCC----------CccCCeEEEEECCCCeEEEcC-CCCCCCcce
Q psy11771 214 MGKWAPV-PSMSSR---RSSCGVAA-LDGAIYCVGGNDG----------TMCMSSGERFNVRRNSWEPIA-PMLSRRSTH 277 (347)
Q Consensus 214 ~~~W~~~-~~~p~~---r~~~~~~~-~~~~iyv~GG~~~----------~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~ 277 (347)
++...+ ...... ..-..++. -++.+|+...... ......+++||+. .+...+. .... ..
T Consensus 101 -g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~---~~ 175 (314)
T 1pjx_A 101 -GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQF---PN 175 (314)
T ss_dssp -SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESS---EE
T ss_pred -CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCC---cc
Confidence 777665 322111 11223333 3678888754321 1112478999987 5554432 1111 12
Q ss_pred EEEEE-----CC-EEEEEeccCCCCCccEEEEEeCC-CCc
Q psy11771 278 EVVNI-----EG-YLLTMGGNDGSSSLNSVEKYDPK-LNK 310 (347)
Q Consensus 278 ~~~~~-----~~-~lyv~GG~~~~~~~~~v~~yd~~-~~~ 310 (347)
+.+.. ++ .||+.... .+.+++||+. +.+
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~ 210 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAK 210 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTE
T ss_pred eEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCc
Confidence 33333 33 57776532 2468888875 443
No 142
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.84 E-value=2.7 Score=36.15 Aligned_cols=119 Identities=11% Similarity=0.113 Sum_probs=66.0
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
++++|+.+... ..+++||+.+.+...+...+. ..-.+++. -++++|+...... .....+++||+.+.....+
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~-~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~~~~ 127 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFVSHK-ANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNLQDI 127 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEECSS-SSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSCEEE
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEeeCCC-CCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEEEEE
Confidence 56788876532 568999999888766532111 12233333 2678888754321 1124799999988765532
Q ss_pred -CCCCCCCcceEEEEE-CCEEEEEeccC-CCCCccEEEEEeCCCCcEEEc
Q psy11771 268 -APMLSRRSTHEVVNI-EGYLLTMGGND-GSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 268 -~~~~~~~~~~~~~~~-~~~lyv~GG~~-~~~~~~~v~~yd~~~~~W~~~ 314 (347)
........-..++.- ++++|+..... .......+++||+++.+...+
T Consensus 128 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~ 177 (333)
T 2dg1_A 128 IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPI 177 (333)
T ss_dssp ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEE
T ss_pred EccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEe
Confidence 222222222222222 67888765321 111234688898887666544
No 143
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=91.84 E-value=2.4 Score=37.17 Aligned_cols=141 Identities=12% Similarity=0.013 Sum_probs=70.1
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWS-SCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
..+++.|+.+ ..+.++|..+.+-. .+..........+++.. ++++++.|+.+ ..+..||..+.+ .
T Consensus 182 ~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d-----g~v~~wd~~~~~--~ 249 (344)
T 4gqb_B 182 DSVFLSCSED-----NRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN-----GTVSLVDTKSTS--C 249 (344)
T ss_dssp TTEEEEEETT-----SCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT-----SEEEEEESCC----C
T ss_pred CCceeeeccc-----cccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccC-----CcEEEEECCCCc--E
Confidence 3566777754 35788898876532 22211111111222222 45677777643 468889987653 2
Q ss_pred cCCCCCCCcceEEEEE--CC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE---CCEEEEEeccC
Q psy11771 220 VPSMSSRRSSCGVAAL--DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI---EGYLLTMGGND 293 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~ 293 (347)
+..+.........+.+ ++ .+.+.|+.+ ..+..||..+.+-.....- ......+.+ +..|++.||.+
T Consensus 250 ~~~~~~h~~~v~~v~fsp~g~~~lasgs~D-----~~i~vwd~~~~~~~~~~~H---~~~V~~v~~sp~~~~llas~s~D 321 (344)
T 4gqb_B 250 VLSSAVHSQCVTGLVFSPHSVPFLASLSED-----CSLAVLDSSLSELFRSQAH---RDFVRDATWSPLNHSLLTTVGWD 321 (344)
T ss_dssp CEEEECCSSCEEEEEECSSSSCCEEEEETT-----SCEEEECTTCCEEEEECCC---SSCEEEEEECSSSTTEEEEEETT
T ss_pred EEEEcCCCCCEEEEEEccCCCeEEEEEeCC-----CeEEEEECCCCcEEEEcCC---CCCEEEEEEeCCCCeEEEEEcCC
Confidence 2211111111222233 33 555666654 4688899888764333211 111223333 34577777765
Q ss_pred CCCCccEEEEEeCCC
Q psy11771 294 GSSSLNSVEKYDPKL 308 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~ 308 (347)
+ .|.+|+..+
T Consensus 322 ~-----~v~~w~v~~ 331 (344)
T 4gqb_B 322 H-----QVVHHVVPT 331 (344)
T ss_dssp S-----CEEEEECCC
T ss_pred C-----eEEEEECCC
Confidence 4 467777655
No 144
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=91.84 E-value=5.5 Score=34.02 Aligned_cols=168 Identities=14% Similarity=0.090 Sum_probs=88.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCc---E
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGK---W 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~---W 217 (347)
++++|+...... ...++.+|+.+.+.+.+...+..+.....+. .++.+|+... ....++++|+.+.+ |
T Consensus 82 dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~~~~v~ 153 (306)
T 2p4o_A 82 NGDLVATGWNAD---SIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQPSGSIW 153 (306)
T ss_dssp TSCEEEEEECTT---SCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTTEEEEE
T ss_pred CCcEEEEeccCC---cceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCCcEeEE
Confidence 567888753211 1358889988888766554444444333332 3557777642 13578999987642 2
Q ss_pred EecCC----CC--CCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCC-CeE---EEcCCCCCCCcceEEEEE-CCEE
Q psy11771 218 APVPS----MS--SRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR-NSW---EPIAPMLSRRSTHEVVNI-EGYL 286 (347)
Q Consensus 218 ~~~~~----~p--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W---~~~~~~~~~~~~~~~~~~-~~~l 286 (347)
..-+. .+ .......+..-++.||+.--. .+.+++||... .+. +....+..+ .+++.- +|+|
T Consensus 154 ~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-----~~~I~~~~~~~~g~~~~~~~~~~~~~P---~gi~vd~dG~l 225 (306)
T 2p4o_A 154 LEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-----KMLLLRIPVDSTDKPGEPEIFVEQTNI---DDFAFDVEGNL 225 (306)
T ss_dssp EECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT-----TTEEEEEEBCTTSCBCCCEEEEESCCC---SSEEEBTTCCE
T ss_pred EECCccccccccCCCCcCCCcCcCCCEEEEEeCC-----CCEEEEEEeCCCCCCCccEEEeccCCC---CCeEECCCCCE
Confidence 11110 11 111122332334678987432 26899999864 221 111111111 223333 6789
Q ss_pred EEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 287 LTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 287 yv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
|+.... .+.|.+||+. .+...+...+.+.....++.+++
T Consensus 226 ~va~~~-----~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g 264 (306)
T 2p4o_A 226 YGATHI-----YNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQ 264 (306)
T ss_dssp EEECBT-----TCCEEEECTT-CCEEEEECGGGTCTTEEEEEECC
T ss_pred EEEeCC-----CCeEEEECCC-CCEEEEeecccccCCceEEEEec
Confidence 887532 2469999986 44544433333334456666653
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=91.80 E-value=5.8 Score=34.20 Aligned_cols=156 Identities=15% Similarity=0.215 Sum_probs=75.7
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCC-CCcEEeCCC--CCCCccceEEEE-ECC-EEEEEcCcCCCCccceEEEE--eCC
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPL-TGVWSSCPA--MTTRRRYCRIAV-VEN-CLYALGGFDSTNYQASVERL--DPR 213 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~--~~~~r~~~~~~~-~~~-~lyv~GG~~~~~~~~~~~~y--d~~ 213 (347)
.++++|+.+..+ +.+.+||.. +.+...... .+.......++. -++ .+|+.+... ..+..| +..
T Consensus 150 pdg~l~v~~~~~-----~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~ 219 (347)
T 3hfq_A 150 PDNRLAVIDLGS-----DKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQ 219 (347)
T ss_dssp TTSCEEEEETTT-----TEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETT
T ss_pred CCCcEEEEeCCC-----CEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence 366677664422 468888887 455543321 111111112222 244 588875432 344444 444
Q ss_pred CCcEEecC---CCCCC---CcceEEEEE--CC-EEEEEcccCCCccCCeEEEEECCC-CeEEEcCCCCCCCcceEEEEE-
Q psy11771 214 MGKWAPVP---SMSSR---RSSCGVAAL--DG-AIYCVGGNDGTMCMSSGERFNVRR-NSWEPIAPMLSRRSTHEVVNI- 282 (347)
Q Consensus 214 ~~~W~~~~---~~p~~---r~~~~~~~~--~~-~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~~~~~~~~~~~~~- 282 (347)
+.++..+. ..+.. ......+.+ ++ .||+.+..+ +.+.+||... .+++.+..++........+.+
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence 56664432 23321 112222333 45 577765432 5788888753 355555444332121223333
Q ss_pred -CC-EEEEEeccCCCCCccEEEEE--eCCCCcEEEccC
Q psy11771 283 -EG-YLLTMGGNDGSSSLNSVEKY--DPKLNKWQLLTP 316 (347)
Q Consensus 283 -~~-~lyv~GG~~~~~~~~~v~~y--d~~~~~W~~~~~ 316 (347)
++ .||+.+..+ +.+.+| |+++.+-+.+..
T Consensus 295 pdg~~l~v~~~~~-----~~v~v~~~d~~tg~l~~~~~ 327 (347)
T 3hfq_A 295 PTEAFVVVVNQNT-----DNATLYARDLTSGKLSLLQK 327 (347)
T ss_dssp TTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEE
T ss_pred CCCCEEEEEEcCC-----CcEEEEEEeCCCCeEEeccc
Confidence 45 466654322 245555 888888876653
No 146
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=91.70 E-value=0.74 Score=40.24 Aligned_cols=106 Identities=14% Similarity=0.231 Sum_probs=60.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcc-eEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSS-CGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
+++++++|+.+ ..+..||..+.+|..+..+...... .+++.. ++.+++.|+.+ ..+..||..+.++..
T Consensus 19 ~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~ 88 (372)
T 1k8k_C 19 DRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD-----RNAYVWTLKGRTWKP 88 (372)
T ss_dssp TSSEEEEECSS-----SEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT-----SCEEEEEEETTEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC-----CeEEEEECCCCeeee
Confidence 45566666543 5688899988877665544322222 233332 56667777654 468889998888765
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 267 IAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
...+.........+.+ +++.++.|+.++ .+.+||..+.
T Consensus 89 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~ 128 (372)
T 1k8k_C 89 TLVILRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQE 128 (372)
T ss_dssp EEECCCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETT
T ss_pred eEEeecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCC
Confidence 5433222222333343 566777776543 3666665544
No 147
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.61 E-value=1.4 Score=39.10 Aligned_cols=140 Identities=14% Similarity=0.041 Sum_probs=70.5
Q ss_pred EEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE-ec
Q psy11771 144 LLYACGGYDGASCLSSMERYDPLTGVWS-SCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA-PV 220 (347)
Q Consensus 144 ~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~~ 220 (347)
..+++|+.+ ..+.+||..+.+-. .+.... ..-.+++.. ++..++.|+.+ ..+..||..+.+-. .+
T Consensus 218 ~~~~~~~~~-----g~i~~~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~ 285 (425)
T 1r5m_A 218 DKFVIPGPK-----GAIFVYQITEKTPTGKLIGHH--GPISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCF 285 (425)
T ss_dssp TEEEEECGG-----GCEEEEETTCSSCSEEECCCS--SCEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEE
T ss_pred CEEEEEcCC-----CeEEEEEcCCCceeeeeccCC--CceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEe
Confidence 345566643 45888998876421 111111 111222222 55566666533 45788887764321 11
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCC
Q psy11771 221 PSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSS 297 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~ 297 (347)
.. ......+++.. ++ +++.|+.+ ..+..||..+.+-...-. ........+.+ ++++++.|+.++
T Consensus 286 ~~--~~~~i~~~~~~~~~-~l~~~~~d-----~~i~i~d~~~~~~~~~~~--~~~~~i~~~~~s~~~~~l~~~~~dg--- 352 (425)
T 1r5m_A 286 YG--HSQSIVSASWVGDD-KVISCSMD-----GSVRLWSLKQNTLLALSI--VDGVPIFAGRISQDGQKYAVAFMDG--- 352 (425)
T ss_dssp CC--CSSCEEEEEEETTT-EEEEEETT-----SEEEEEETTTTEEEEEEE--CTTCCEEEEEECTTSSEEEEEETTS---
T ss_pred cC--CCccEEEEEECCCC-EEEEEeCC-----CcEEEEECCCCcEeEecc--cCCccEEEEEEcCCCCEEEEEECCC---
Confidence 11 11112333333 45 56666544 578899998765332211 11112223333 567777776543
Q ss_pred ccEEEEEeCCCCc
Q psy11771 298 LNSVEKYDPKLNK 310 (347)
Q Consensus 298 ~~~v~~yd~~~~~ 310 (347)
.+.+||..+.+
T Consensus 353 --~i~i~~~~~~~ 363 (425)
T 1r5m_A 353 --QVNVYDLKKLN 363 (425)
T ss_dssp --CEEEEECHHHH
T ss_pred --eEEEEECCCCc
Confidence 58888876654
No 148
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=91.60 E-value=3.2 Score=36.61 Aligned_cols=146 Identities=8% Similarity=-0.017 Sum_probs=69.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCc--------------cceEEEEE-CCEEEEEcCcCCCCccce
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRR--------------RYCRIAVV-ENCLYALGGFDSTNYQAS 206 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r--------------~~~~~~~~-~~~lyv~GG~~~~~~~~~ 206 (347)
++..++.|+.+ ..+.+||..+.+....-...... .-.+++.. ++. +++|+.+ ..
T Consensus 160 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----g~ 228 (425)
T 1r5m_A 160 DGTHIISMDVE-----NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-----GA 228 (425)
T ss_dssp TSSEEEEEETT-----CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG-----GC
T ss_pred CCCEEEEEecC-----CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-----Ce
Confidence 45555566643 35788888776543221111111 01222223 444 5555543 56
Q ss_pred EEEEeCCCCcEEecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC
Q psy11771 207 VERLDPRMGKWAPVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG 284 (347)
Q Consensus 207 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~ 284 (347)
+..||..+.+-...-..... .-.+++.. ++.+++.|+.+ ..+..||..+.+....-.. .......++.. ++
T Consensus 229 i~~~d~~~~~~~~~~~~~~~-~i~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~-~~~~i~~~~~~~~~ 301 (425)
T 1r5m_A 229 IFVYQITEKTPTGKLIGHHG-PISVLEFNDTNKLLLSASDD-----GTLRIWHGGNGNSQNCFYG-HSQSIVSASWVGDD 301 (425)
T ss_dssp EEEEETTCSSCSEEECCCSS-CEEEEEEETTTTEEEEEETT-----SCEEEECSSSBSCSEEECC-CSSCEEEEEEETTT
T ss_pred EEEEEcCCCceeeeeccCCC-ceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCccceEecC-CCccEEEEEECCCC
Confidence 88899886532111111111 11223322 56666666644 4678888776432111110 11111223333 45
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
+++.|+.+ ..+.+||..+.+-
T Consensus 302 -~l~~~~~d-----~~i~i~d~~~~~~ 322 (425)
T 1r5m_A 302 -KVISCSMD-----GSVRLWSLKQNTL 322 (425)
T ss_dssp -EEEEEETT-----SEEEEEETTTTEE
T ss_pred -EEEEEeCC-----CcEEEEECCCCcE
Confidence 56666643 3688999877653
No 149
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=91.57 E-value=2.7 Score=36.23 Aligned_cols=148 Identities=18% Similarity=0.118 Sum_probs=72.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++++++.|+.+ ..+.+||..+.+-... +....... +++.. +++.++.|+.+ ..+..||..+.+-..
T Consensus 43 ~~~~l~~~~~d-----g~i~vwd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 110 (369)
T 3zwl_B 43 EGDLLFSCSKD-----SSASVWYSLNGERLGT--LDGHTGTIWSIDVDCFTKYCVTGSAD-----YSIKLWDVSNGQCVA 110 (369)
T ss_dssp TSCEEEEEESS-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----TEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCC-----CEEEEEeCCCchhhhh--hhhcCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcEEE
Confidence 56777777754 3588888877653221 11111112 22222 45566666543 568889988776443
Q ss_pred cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCe----EEEcCCCCC-------CCcceEEEEE--CCE
Q psy11771 220 VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNS----WEPIAPMLS-------RRSTHEVVNI--EGY 285 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~----W~~~~~~~~-------~~~~~~~~~~--~~~ 285 (347)
.-..+.. ..+++. -++..+++++.+.......+..||..+.. +......+. .......+.+ +++
T Consensus 111 ~~~~~~~--v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (369)
T 3zwl_B 111 TWKSPVP--VKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGK 188 (369)
T ss_dssp EEECSSC--EEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGC
T ss_pred EeecCCC--eEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCC
Confidence 3222221 122222 24555555554322222467777765431 222211110 0012233333 456
Q ss_pred EEEEeccCCCCCccEEEEEeCCC
Q psy11771 286 LLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 286 lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
.+++|+.+ ..+.+||..+
T Consensus 189 ~l~~~~~d-----g~i~i~d~~~ 206 (369)
T 3zwl_B 189 YIIAGHKD-----GKISKYDVSN 206 (369)
T ss_dssp EEEEEETT-----SEEEEEETTT
T ss_pred EEEEEcCC-----CEEEEEECCC
Confidence 66666643 3688888876
No 150
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=91.51 E-value=5.7 Score=33.55 Aligned_cols=147 Identities=11% Similarity=0.115 Sum_probs=76.7
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeC-CCCCC--C-ccceEEEE-ECCEEEEEcCcCC----------CCccceE
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSC-PAMTT--R-RRYCRIAV-VENCLYALGGFDS----------TNYQASV 207 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~~~--~-r~~~~~~~-~~~~lyv~GG~~~----------~~~~~~~ 207 (347)
+++|+.... +.+.+||+. ++...+ ..... + ..-..++. -++++|+...... ......+
T Consensus 83 g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l 155 (314)
T 1pjx_A 83 NQLFVADMR------LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSI 155 (314)
T ss_dssp SEEEEEETT------TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEE
T ss_pred CcEEEEECC------CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeE
Confidence 788887641 368999998 776655 32211 1 11223333 2678888754221 1123578
Q ss_pred EEEeCCCCcEEecC-CCCCCCcceEEEEE-----CC-EEEEEcccCCCccCCeEEEEECC-CCeEEE---cCCCCCCC-c
Q psy11771 208 ERLDPRMGKWAPVP-SMSSRRSSCGVAAL-----DG-AIYCVGGNDGTMCMSSGERFNVR-RNSWEP---IAPMLSRR-S 275 (347)
Q Consensus 208 ~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~---~~~~~~~~-~ 275 (347)
++||+. .+...+. .+.. ...++.. ++ .+|+....+ ..+++||+. +++... ...++... .
T Consensus 156 ~~~~~~-g~~~~~~~~~~~---~~~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~~~ 226 (314)
T 1pjx_A 156 YCFTTD-GQMIQVDTAFQF---PNGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWGHIPGTHEG 226 (314)
T ss_dssp EEECTT-SCEEEEEEEESS---EEEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEEECCCCSSC
T ss_pred EEECCC-CCEEEeccCCCC---cceEEEecccCCCCCEEEEEECCC-----CeEEEEECCCCCccccceEEEECCCCCCC
Confidence 999987 5554432 1111 1233333 34 577765322 578889875 444321 11222111 1
Q ss_pred ceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 276 THEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 276 ~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
....+.+ ++.||+.... .+.+.+||+.+.+
T Consensus 227 ~p~~i~~d~~G~l~v~~~~-----~~~i~~~d~~~g~ 258 (314)
T 1pjx_A 227 GADGMDFDEDNNLLVANWG-----SSHIEVFGPDGGQ 258 (314)
T ss_dssp EEEEEEEBTTCCEEEEEET-----TTEEEEECTTCBS
T ss_pred CCCceEECCCCCEEEEEcC-----CCEEEEEcCCCCc
Confidence 1222333 6788887532 2368999998544
No 151
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=91.50 E-value=7.7 Score=37.64 Aligned_cols=164 Identities=10% Similarity=-0.024 Sum_probs=87.5
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCC------C--cEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeC
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLT------G--VWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDP 212 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~------~--~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~ 212 (347)
.+++..+++...+....+.++.+|..+ . .+..+....... ......-++.+|+.+..+. ....++.+|.
T Consensus 242 pDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~ 318 (710)
T 2xdw_A 242 DDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDF 318 (710)
T ss_dssp TTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSC-EEEEEEETTEEEEEECTTC--TTCEEEEEET
T ss_pred CCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeC
Confidence 345444443332222246789999875 3 466654322222 2233345778888865432 2467899998
Q ss_pred CCC---cEEecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCe-EEEcCCCCCCCcceEEEEE--CC-
Q psy11771 213 RMG---KWAPVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNS-WEPIAPMLSRRSTHEVVNI--EG- 284 (347)
Q Consensus 213 ~~~---~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~~~~~~~~~~~~~--~~- 284 (347)
.+. .|+.+.+-.....-..+... ++.+++....++ ...++.+|+.+++ ...+. .+ ......+.. ++
T Consensus 319 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~l~~~~~~~g~~~~~l~-~~--~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 319 TDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNTLQLHDLATGALLKIFP-LE--VGSVVGYSGQKKDT 392 (710)
T ss_dssp TSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTTCCEEEEEC-CC--SSEEEEEECCTTCS
T ss_pred CCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEEEEEEECCCCCEEEecC-CC--CceEEEEecCCCCC
Confidence 775 58876542221222334445 677777665432 2468899985554 44443 22 111222222 33
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCc--EEEcc
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNK--WQLLT 315 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~ 315 (347)
.+++.... ...-..++.||..+++ .+.+.
T Consensus 393 ~l~~~~ss--~~~P~~i~~~d~~tg~~~~~~l~ 423 (710)
T 2xdw_A 393 EIFYQFTS--FLSPGIIYHCDLTKEELEPRVFR 423 (710)
T ss_dssp EEEEEEEC--SSCCCEEEEEETTSSSCCCEEEE
T ss_pred EEEEEEeC--CCCCCEEEEEECCCCccceEEee
Confidence 45443321 1123579999998877 66554
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=91.34 E-value=5.4 Score=32.90 Aligned_cols=155 Identities=11% Similarity=-0.013 Sum_probs=81.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCC-CcEEeCCCCCC-CccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLT-GVWSSCPAMTT-RRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~~~~~~~~-~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+++.+++++ ...++++|..+ .+...+..... .........-+++.+++++.... ....++.++..+.....
T Consensus 52 dg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~ 124 (297)
T 2ojh_A 52 DGKYLLLNS------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRL 124 (297)
T ss_dssp TSSEEEEEE------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEE
T ss_pred CCCEEEEEc------CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEE
Confidence 556555554 14789999988 77666543332 11111222235554455442221 24678899988776555
Q ss_pred cCCCCCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEec-cCC
Q psy11771 220 VPSMSSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGG-NDG 294 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG-~~~ 294 (347)
+..... ...++.. ++ .|++.++.++. ..++.+|..+.....+...+.. ...+.+ +++.+++++ .++
T Consensus 125 ~~~~~~---~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~~~~ 195 (297)
T 2ojh_A 125 MTKNLP---SYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLTHGEGR---NDGPDYSPDGRWIYFNSSRTG 195 (297)
T ss_dssp CCSSSS---EEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECCCSSSC---EEEEEECTTSSEEEEEECTTS
T ss_pred eecCCC---ccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcccCCCc---cccceECCCCCEEEEEecCCC
Confidence 543222 2222222 44 45545543321 3677788887777665543321 122333 455444443 232
Q ss_pred CCCccEEEEEeCCCCcEEEcc
Q psy11771 295 SSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~W~~~~ 315 (347)
...++.++........+.
T Consensus 196 ---~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 196 ---QMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp ---SCEEEEEETTSSCEEECC
T ss_pred ---CccEEEECCCCCCcEEEe
Confidence 356888887777766654
No 153
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=91.25 E-value=5.1 Score=32.48 Aligned_cols=100 Identities=15% Similarity=0.201 Sum_probs=60.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc--E-EeCCC--CCCCccceEEEEE---CCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV--W-SSCPA--MTTRRRYCRIAVV---ENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~--~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++++|+|-| +.+|+|+..+-. + +.+.. +|..-....+|.. ++++|+|-| +..|+||..
T Consensus 79 ~~~iyfFkG-------~~~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~ 144 (207)
T 1pex_A 79 HDLIFIFRG-------RKFWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDT 144 (207)
T ss_dssp TTEEEEEET-------TEEEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETT
T ss_pred CCcEEEEcc-------CEEEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCc
Confidence 589999988 678888743211 1 22322 2221112233332 479999988 778999987
Q ss_pred CCcEEe---------cCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 214 MGKWAP---------VPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 214 ~~~W~~---------~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
+++-.. .+.+|.. -.++...++++|++-| +..++||..+.+=
T Consensus 145 ~~~~d~gyPr~i~~~~~Gip~~--iDaAf~~~g~~YfFkg-------~~y~rf~~~~~~v 195 (207)
T 1pex_A 145 NHIMDKDYPRLIEEDFPGIGDK--VDAVYEKNGYIYFFNG-------PIQFEYSIWSNRI 195 (207)
T ss_dssp TTEECSSCCCBHHHHSTTSCSC--CSEEEEETTEEEEEET-------TEEEEEETTTTEE
T ss_pred CccccCCCCccHHHcCCCCCCC--ccEEEEcCCcEEEEEC-------CEEEEEeCCccEE
Confidence 654221 1223322 2344456999999988 6889999987653
No 154
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=91.24 E-value=3.4 Score=36.33 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=54.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCCCC-C---CccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPAMT-T---RRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~-~---~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
++ +++.|+.+ ..+.+||..+.+... +.... . ...-.+++.. ++.+++.|+.++ ....+..||..+.
T Consensus 197 ~~-~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~--~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 197 RG-LIATGFNN-----GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSN--SFGCITLYETEFG 268 (397)
T ss_dssp TS-EEEEECTT-----SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEET--TEEEEEEEETTTC
T ss_pred Cc-eEEEEeCC-----CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCC--CCceEEEEECCCC
Confidence 45 66666644 468889988765322 11100 0 1111122222 456666665321 0146888998766
Q ss_pred cEEe-cCCCC--C--------CCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 216 KWAP-VPSMS--S--------RRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 216 ~W~~-~~~~p--~--------~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
+-.. +...+ . .......+.+ ++.+++.|+.+ ..+..||..+.+-
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD-----GKLRFWDVKTKER 325 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC-----CeEEEEEcCCCce
Confidence 4222 21100 0 1112222233 46666777654 4788999987653
No 155
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=91.21 E-value=0.1 Score=46.79 Aligned_cols=142 Identities=15% Similarity=0.166 Sum_probs=57.3
Q ss_pred EEECCEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC-
Q psy11771 139 CSFDGLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG- 215 (347)
Q Consensus 139 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~- 215 (347)
++.++.||+.+. + ..++++|..+.+ |+.-. . + ...+.+..++.+|+.++.+ ..++.+|..+.
T Consensus 6 ~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~-~-~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--D-P-VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--C-C-SCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--C-C-ceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 344666766543 2 368999988765 76433 1 1 1112234467788876533 45888998654
Q ss_pred -cEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCC--eEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy11771 216 -KWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRN--SWEPIAPMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 216 -~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
.|+.....+... ..+.+. .++.+|+ |+.+ ..++.+|+.++ .|+.-..-. ...+..++.||+ |+
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~d-----g~v~a~D~~tG~~~w~~~~~~~-----~~~~p~~~~v~~-~~ 137 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILYM-GKKQ-----DIWYVIDLLTGEKQQTLSSAFA-----DSLSPSTSLLYL-GR 137 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CCC-CEEE-----EEEEEECCC---------------------------EEE-EE
T ss_pred eeeeeeccCcccc-ccCceEecCCEEEE-EeCC-----CEEEEEECCCCcEEEEecCCCc-----ccccccCCEEEE-Ee
Confidence 566432211110 011111 3555554 3322 46888998765 365432211 011123455555 33
Q ss_pred cCCCCCccEEEEEeCCCCc--EEE
Q psy11771 292 NDGSSSLNSVEKYDPKLNK--WQL 313 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~--W~~ 313 (347)
.+ ..+.++|+++.+ |+.
T Consensus 138 ~d-----g~v~a~d~~tG~~~W~~ 156 (369)
T 2hz6_A 138 TE-----YTITMYDTKTRELRWNA 156 (369)
T ss_dssp EE-----EEEECCCSSSSSCCCEE
T ss_pred cC-----CEEEEEECCCCCEEEeE
Confidence 21 358888887654 774
No 156
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=91.01 E-value=6.8 Score=33.52 Aligned_cols=144 Identities=16% Similarity=0.237 Sum_probs=72.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.++..++.|+.+ ..+.++|..+++-.. .+....... +++.. ++.+++.|+.+ ..+..||.....-.
T Consensus 75 ~dg~~l~s~s~D-----~~v~~wd~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 75 ADGAYALSASWD-----KTLRLWDVATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLA 142 (319)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEE
Confidence 356667777754 468889988775321 111111111 22222 45666667644 45777887655433
Q ss_pred ecCCCCCCCcceEEEEE-------CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEE
Q psy11771 219 PVPSMSSRRSSCGVAAL-------DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTM 289 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~-------~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~ 289 (347)
.+..-... ...+... ++..++.||.+ ..+..||..+.+-... +.........+.+ ++++++.
T Consensus 143 ~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s 213 (319)
T 3frx_A 143 TLLGHNDW--VSQVRVVPNEKADDDSVTIISAGND-----KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIAS 213 (319)
T ss_dssp EECCCSSC--EEEEEECCC------CCEEEEEETT-----SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEE
T ss_pred EEeccCCc--EEEEEEccCCCCCCCccEEEEEeCC-----CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEE
Confidence 33221111 1111111 23355566654 4678888877653221 1111111222333 5677777
Q ss_pred eccCCCCCccEEEEEeCCCCc
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~ 310 (347)
|+.++ .+.+||..+.+
T Consensus 214 ~~~dg-----~i~iwd~~~~~ 229 (319)
T 3frx_A 214 AGKDG-----EIMLWNLAAKK 229 (319)
T ss_dssp EETTC-----EEEEEETTTTE
T ss_pred EeCCC-----eEEEEECCCCc
Confidence 77543 57778876654
No 157
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=90.83 E-value=6.6 Score=33.40 Aligned_cols=146 Identities=18% Similarity=0.157 Sum_probs=68.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
+++.++.|+.+ ..+..++........................++..++.|+.+ ..+..||.....-....
T Consensus 97 dg~~l~s~~~d-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~~~~~d~~~~~~~~~~ 166 (340)
T 4aow_A 97 DGQFALSGSWD-----GTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-----KTIKLWNTLGVCKYTVQ 166 (340)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEEEC
T ss_pred CCCEEEEEccc-----ccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-----CeEEEEEeCCCceEEEE
Confidence 56666777754 346677776665433222222222222222244555555543 34667777654332222
Q ss_pred CCCCCCcceEEEEE----CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 222 SMSSRRSSCGVAAL----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 222 ~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
...... ....+.+ .+.+++.|+.+ ..+..||..+.+....-.-.. ....++.+ ++++++.|+.++
T Consensus 167 ~~~~~~-~v~~~~~~~~~~~~~~~s~~~d-----~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg- 237 (340)
T 4aow_A 167 DESHSE-WVSCVRFSPNSSNPIIVSCGWD-----KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG- 237 (340)
T ss_dssp SSSCSS-CEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC-
T ss_pred eccccC-cccceEEccCCCCcEEEEEcCC-----CEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC-
Confidence 211111 1122222 23455666654 467888888776433211111 11222333 566677776542
Q ss_pred CCccEEEEEeCCCCc
Q psy11771 296 SSLNSVEKYDPKLNK 310 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~ 310 (347)
.+.+||..+.+
T Consensus 238 ----~i~iwd~~~~~ 248 (340)
T 4aow_A 238 ----QAMLWDLNEGK 248 (340)
T ss_dssp ----EEEEEETTTTE
T ss_pred ----eEEEEEeccCc
Confidence 46666665543
No 158
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=90.75 E-value=7.4 Score=33.48 Aligned_cols=156 Identities=15% Similarity=0.183 Sum_probs=75.4
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC---CCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT---TRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~---~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
...+ +++.||.+ ..+.+||..++.+.....+. ....-.+++.. ++.+.+.|+.+ ..+..||....
T Consensus 22 ~s~~-~las~~~D-----~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D-----~~v~iw~~~~~ 90 (330)
T 2hes_X 22 FSQG-ILATGSTD-----RKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFD-----STVSIWAKEES 90 (330)
T ss_dssp EETT-EEEEEESS-----SCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETT-----SCEEEEEC---
T ss_pred cCCC-EEEEEcCC-----CEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCC-----CcEEEEEcccC
Confidence 3344 66667654 35778888765443322221 11111222222 55666667644 45677776432
Q ss_pred -----cEEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCC--CeEEEcCCCCCCCcceEEEEE--CC
Q psy11771 216 -----KWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRR--NSWEPIAPMLSRRSTHEVVNI--EG 284 (347)
Q Consensus 216 -----~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~~~~~--~~ 284 (347)
.+..+..+.........+.+ ++..++.|+.+ ..+..||..+ ..++.+..+.........+.+ ++
T Consensus 91 ~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D-----~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 165 (330)
T 2hes_X 91 ADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRD-----KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSE 165 (330)
T ss_dssp ----CCCEEEEEEC----CEEEEEECTTSCEEEEEETT-----SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSS
T ss_pred cCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCC-----CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCC
Confidence 12222211111111122222 56677777754 4678888742 234433322222222233343 56
Q ss_pred EEEEEeccCCCCCccEEEEEeCCCCcEEEccC
Q psy11771 285 YLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 285 ~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 316 (347)
.+++.|+.++ .+.+||..+..|+.+..
T Consensus 166 ~~l~s~s~D~-----~i~iW~~~~~~~~~~~~ 192 (330)
T 2hes_X 166 ALLASSSYDD-----TVRIWKDYDDDWECVAV 192 (330)
T ss_dssp SEEEEEETTS-----CEEEEEEETTEEEEEEE
T ss_pred CEEEEEcCCC-----eEEEEECCCCCeeEEEE
Confidence 6777777643 47788877777765543
No 159
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=90.73 E-value=3.1 Score=36.98 Aligned_cols=104 Identities=14% Similarity=0.181 Sum_probs=57.3
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
+++.++.|+.+ ..+..||..+.+-...-.-. ...-.+++.. ++...+.|+.+ ..+..||..+.+....
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~~~~ 202 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQGH-EQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQCSLT 202 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEECCC-SSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEccC-CCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCeeEEE
Confidence 56666777643 46888998877543321111 1111222222 45555666654 5788899988765432
Q ss_pred CCCCCCCcceEEEEE---CCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 268 APMLSRRSTHEVVNI---EGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
-.... ....+.+ ++++++.|+.++ .+.+||..+.+-
T Consensus 203 ~~~~~---~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~ 241 (393)
T 1erj_A 203 LSIED---GVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFL 241 (393)
T ss_dssp EECSS---CEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCE
T ss_pred EEcCC---CcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcE
Confidence 22111 1222222 567777777643 478888876653
No 160
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.62 E-value=0.87 Score=40.26 Aligned_cols=146 Identities=16% Similarity=0.182 Sum_probs=73.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC-----------CCCCccce-EEEEE--CCEEEEEcCcCCCCccceE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA-----------MTTRRRYC-RIAVV--ENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-----------~~~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~~ 207 (347)
++.+++.|+.+ ..+.+||..+........ ........ +++.. ++.+++.|+.+ ..+
T Consensus 55 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d-----~~i 124 (408)
T 4a11_B 55 EGRYMLSGGSD-----GVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD-----KTL 124 (408)
T ss_dssp TCCEEEEEETT-----SCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT-----SEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC-----CeE
Confidence 67788888765 357888887654321110 00111112 22222 44566666543 568
Q ss_pred EEEeCCCCcEEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--C
Q psy11771 208 ERLDPRMGKWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--E 283 (347)
Q Consensus 208 ~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~ 283 (347)
..||..+.+-...-..+........... ++.++++|+.+ ..+..||..+.+-.. .+.........+.+ +
T Consensus 125 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~--~~~~~~~~v~~~~~~~~ 197 (408)
T 4a11_B 125 KVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSH--ILQGHRQEILAVSWSPR 197 (408)
T ss_dssp EEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCE--EECCCCSCEEEEEECSS
T ss_pred EEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceee--eecCCCCcEEEEEECCC
Confidence 8899887765443333322211111111 34466666654 468888887653211 11111122223333 3
Q ss_pred CE-EEEEeccCCCCCccEEEEEeCCCC
Q psy11771 284 GY-LLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 284 ~~-lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
+. +++.|+.++ .+.+||..+.
T Consensus 198 ~~~ll~~~~~dg-----~i~i~d~~~~ 219 (408)
T 4a11_B 198 YDYILATASADS-----RVKLWDVRRA 219 (408)
T ss_dssp CTTEEEEEETTS-----CEEEEETTCS
T ss_pred CCcEEEEEcCCC-----cEEEEECCCC
Confidence 33 677777543 4788887654
No 161
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=90.51 E-value=2.6 Score=41.41 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=72.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++...++|+.+ ..+.+||..+++... +.....+ ........++...++|+.+ ..+..||..+.+....
T Consensus 24 ~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 24 TEPWVLTTLYS-----GRVEIWNYETQVEVRSIQVTETP-VRAGKFIARKNWIIVGSDD-----FRIRVFNYNTGEKVVD 92 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC-EEEEEEEGGGTEEEEEETT-----SEEEEEETTTCCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCceEEEEecCCCc-EEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCcEEEE
Confidence 55666677643 468889988775432 2211111 1111122255556666643 5688999887765432
Q ss_pred CCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCC-eEEEcCCCCCCCcceEEEEE---CCEEEEEeccCCC
Q psy11771 221 PSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPIAPMLSRRSTHEVVNI---EGYLLTMGGNDGS 295 (347)
Q Consensus 221 ~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~---~~~lyv~GG~~~~ 295 (347)
-...... -.+++. -++...+.|+.+ ..+..||..++ ..... +.........+.+ ++.++++|+.+
T Consensus 93 ~~~~~~~-v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d-- 162 (814)
T 3mkq_A 93 FEAHPDY-IRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLD-- 162 (814)
T ss_dssp EECCSSC-EEEEEECSSSSEEEEEETT-----SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETT--
T ss_pred EecCCCC-EEEEEEeCCCCEEEEEcCC-----CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCC--
Confidence 1111111 122222 245555566543 47888888765 33222 1111111222333 35667777654
Q ss_pred CCccEEEEEeCCCC
Q psy11771 296 SSLNSVEKYDPKLN 309 (347)
Q Consensus 296 ~~~~~v~~yd~~~~ 309 (347)
..+.+||..+.
T Consensus 163 ---g~v~vwd~~~~ 173 (814)
T 3mkq_A 163 ---RTVKVWSLGQS 173 (814)
T ss_dssp ---SEEEEEETTCS
T ss_pred ---CeEEEEECCCC
Confidence 35778887544
No 162
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.49 E-value=7.4 Score=33.06 Aligned_cols=177 Identities=15% Similarity=0.143 Sum_probs=87.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC-CCC---ccceEEEEECCEEEEE----cCcCC--------CCccc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM-TTR---RRYCRIAVVENCLYAL----GGFDS--------TNYQA 205 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~---r~~~~~~~~~~~lyv~----GG~~~--------~~~~~ 205 (347)
++++|+.... ...+.+||+. .+.+.+... ... +...-+..-++.+|+. |-... .....
T Consensus 96 dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~ 169 (305)
T 3dr2_A 96 QQRLVHCEHG-----RRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHH 169 (305)
T ss_dssp TSCEEEEETT-----TTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCE
T ss_pred CCCEEEEECC-----CCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCC
Confidence 5677776321 1468888876 555544321 111 1111222237789986 32110 01235
Q ss_pred eEEEEeCCCCcEEecCCCCCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCCCeEEE---cCCCCCCCcceEEE
Q psy11771 206 SVERLDPRMGKWAPVPSMSSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEP---IAPMLSRRSTHEVV 280 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~~~~~~~~~~~~~~ 280 (347)
.+++||+.+.+++.+..+ . ....++.. ++ .||+............+++||...+.... ....+...- .+++
T Consensus 170 ~v~~~d~~~g~~~~~~~~--~-~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p-dgi~ 245 (305)
T 3dr2_A 170 SVYRLPPDGSPLQRMADL--D-HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP-DGFC 245 (305)
T ss_dssp EEEEECSSSCCCEEEEEE--S-SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC-CSEE
T ss_pred eEEEEcCCCCcEEEEecC--C-CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC-CeEE
Confidence 799999988877665411 1 11233332 34 58887543211112579999887654221 111111111 1222
Q ss_pred E-ECCEEEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcCCCcceEEEEc
Q psy11771 281 N-IEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLETLNIEKRLLVA 341 (347)
Q Consensus 281 ~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~ 341 (347)
. -++.||+..+ ..+.+||+....-..+. ++. ....+.++ ....++++.
T Consensus 246 ~d~~G~lwv~~~-------~gv~~~~~~g~~~~~~~-~~~---~~~~~~f~--~d~~~L~it 294 (305)
T 3dr2_A 246 VDRGGWLWSSSG-------TGVCVFDSDGQLLGHIP-TPG---TASNCTFD--QAQQRLFIT 294 (305)
T ss_dssp ECTTSCEEECCS-------SEEEEECTTSCEEEEEE-CSS---CCCEEEEC--TTSCEEEEE
T ss_pred ECCCCCEEEecC-------CcEEEECCCCCEEEEEE-CCC---ceeEEEEe--CCCCEEEEE
Confidence 2 2677887542 35999999766555443 232 23444454 234556653
No 163
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=90.43 E-value=7.2 Score=32.80 Aligned_cols=151 Identities=18% Similarity=0.182 Sum_probs=79.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC----CCccceEEEEECCEEEEE----cCcC--------CCCccc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT----TRRRYCRIAVVENCLYAL----GGFD--------STNYQA 205 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~----~~r~~~~~~~~~~~lyv~----GG~~--------~~~~~~ 205 (347)
++++|+.... ...+.+||+.+.+.+.+.... ..+...-+..-++++|+. |... ......
T Consensus 79 dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 79 QGHLIACSHG-----LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp TCCEEEEETT-----TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred CCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 6778776431 256899999888876553211 111111222236789986 3311 011135
Q ss_pred eEEEEeCCCCcEEecCC-CCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECC-CCeE-E--EcCCCCCCCcceEE
Q psy11771 206 SVERLDPRMGKWAPVPS-MSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVR-RNSW-E--PIAPMLSRRSTHEV 279 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~-~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W-~--~~~~~~~~~~~~~~ 279 (347)
.++++|+. .+...+.. +..+ .+++. -++++++....+ ..+++||.. +.+. . .+-....... .++
T Consensus 154 ~l~~~~~~-g~~~~~~~~~~~~---~gi~~s~dg~~lv~~~~~-----~~i~~~~~~~~g~~~~~~~~~~~~~~~p-~~i 223 (296)
T 3e5z_A 154 WVFRLAPD-GTLSAPIRDRVKP---NGLAFLPSGNLLVSDTGD-----NATHRYCLNARGETEYQGVHFTVEPGKT-DGL 223 (296)
T ss_dssp EEEEECTT-SCEEEEECCCSSE---EEEEECTTSCEEEEETTT-----TEEEEEEECSSSCEEEEEEEECCSSSCC-CSE
T ss_pred EEEEECCC-CCEEEeecCCCCC---ccEEECCCCCEEEEeCCC-----CeEEEEEECCCCcCcCCCeEeeCCCCCC-CeE
Confidence 79999987 55544322 2111 23333 256666444322 578899876 4444 1 1111111111 123
Q ss_pred EE-ECCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 280 VN-IEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 280 ~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
+. -+++||+..+ +.+.+||+.......+
T Consensus 224 ~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~ 252 (296)
T 3e5z_A 224 RVDAGGLIWASAG-------DGVHVLTPDGDELGRV 252 (296)
T ss_dssp EEBTTSCEEEEET-------TEEEEECTTSCEEEEE
T ss_pred EECCCCCEEEEcC-------CeEEEECCCCCEEEEE
Confidence 33 2788888762 4699999986654444
No 164
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=90.42 E-value=8.5 Score=33.64 Aligned_cols=103 Identities=10% Similarity=-0.040 Sum_probs=54.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc-------EEeCCCCCCCccceEEEE-EC----C---EEEEEcCcCCCCccce
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV-------WSSCPAMTTRRRYCRIAV-VE----N---CLYALGGFDSTNYQAS 206 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-------W~~~~~~~~~r~~~~~~~-~~----~---~lyv~GG~~~~~~~~~ 206 (347)
...+++.|+.+ ..+.+||..+.+ ...+.....+- .+++. .+ + ..++.|+.+ ..
T Consensus 25 ~~~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~h~~~v--~~~~~~~~~~~~g~~~~~l~s~~~d-----g~ 92 (397)
T 1sq9_A 25 CNSFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHFVHKSGL--HHVDVLQAIERDAFELCLVATTSFS-----GD 92 (397)
T ss_dssp CSSEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEECCTTCE--EEEEEEEEEETTTEEEEEEEEEETT-----SC
T ss_pred cCCeEEEEcCC-----CEEEEEECCCcccccCCCcceEEecCCCcE--EEEEEecccccCCccccEEEEEcCC-----CC
Confidence 44677777754 468888887765 22222111111 12222 23 5 677777644 45
Q ss_pred EEEEeCCCCc------EEecCCCCCC---CcceEEEEE-----CCEE-EEEcccCCCccCCeEEEEECCC
Q psy11771 207 VERLDPRMGK------WAPVPSMSSR---RSSCGVAAL-----DGAI-YCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 207 ~~~yd~~~~~------W~~~~~~p~~---r~~~~~~~~-----~~~i-yv~GG~~~~~~~~~v~~yd~~~ 261 (347)
+..||..+.+ +..+...+.. ..-.+++.. ++.. ++.|+.+ ..+..||..+
T Consensus 93 i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~ 157 (397)
T 1sq9_A 93 LLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK-----GTTYIWKFHP 157 (397)
T ss_dssp EEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT-----SCEEEEEEES
T ss_pred EEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC-----CcEEEEeCCc
Confidence 7888877766 6666554311 122233333 4555 7777654 4577777655
No 165
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=90.39 E-value=9.7 Score=34.24 Aligned_cols=148 Identities=15% Similarity=0.027 Sum_probs=82.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCc-EEe
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGK-WAP 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W~~ 219 (347)
.+++||+.... ...+.++|+.++.-..+..... ....+...-++.+|+...... ..++.+++.+.. ...
T Consensus 140 ~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~~-~~~ia~~~~g~~l~~~d~~~~----~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 140 GNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGFK-GGKPAVTKDKQRVYSIGWEGT----HTVYVYMKASGWAPTR 209 (409)
T ss_dssp STTEEEEEETT-----TTEEEEEETTTTEEEEEEETCC-BCBCEECTTSSEEEEEBSSTT----CEEEEEEGGGTTCEEE
T ss_pred CCCCEEEEecC-----CCcEEEEECCCCEEEEeeccCC-CCceeEecCCCcEEEEecCCC----ceEEEEEcCCCceeEE
Confidence 47889998652 2579999998876554432211 111222222457887754221 278999987543 233
Q ss_pred cCCC-C-CCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcC---CCCCCCcc-e-EEEEE--CCEEEE
Q psy11771 220 VPSM-S-SRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA---PMLSRRST-H-EVVNI--EGYLLT 288 (347)
Q Consensus 220 ~~~~-p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~~~~~~~-~-~~~~~--~~~lyv 288 (347)
+... + .....++++.. ++.||+... ...+++||+.+.....+. ........ . .++.. ++.||+
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 3111 1 11112233332 688999432 247999999887655542 11111122 1 44444 589999
Q ss_pred EeccCCCCCccEEEEEeCCCC
Q psy11771 289 MGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 289 ~GG~~~~~~~~~v~~yd~~~~ 309 (347)
.... .+.|++||+...
T Consensus 284 ~d~~-----~~~I~~~~~~g~ 299 (409)
T 3hrp_A 284 SDQN-----LSSVYKITPDGE 299 (409)
T ss_dssp EETT-----TTEEEEECTTCC
T ss_pred EeCC-----CCEEEEEecCCC
Confidence 7643 247889987655
No 166
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.22 E-value=1.3 Score=40.20 Aligned_cols=143 Identities=12% Similarity=0.117 Sum_probs=68.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCC-ccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTR-RRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~-r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.++|..++........... ....+++. .++.+++.|+.+ ..+..||.....
T Consensus 176 ~~~~l~s~s~D-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~d-----g~i~~wd~~~~~--- 242 (435)
T 4e54_B 176 NTNQFYASSME-----GTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNV-----GNVILLNMDGKE--- 242 (435)
T ss_dssp CTTEEEEECSS-----SCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSS-----SBEEEEESSSCB---
T ss_pred CCCEEEEEeCC-----CEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCC-----CcEeeeccCcce---
Confidence 34455555543 2466777776655443222211 11122333 256677777644 457888886543
Q ss_pred cCCCCCCCcceEEEEE---CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC--CC-CcceEEEEE--CCEEEEEec
Q psy11771 220 VPSMSSRRSSCGVAAL---DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML--SR-RSTHEVVNI--EGYLLTMGG 291 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~--~~-~~~~~~~~~--~~~lyv~GG 291 (347)
+..+.........+.+ ++.+++.|+.+ ..+..||..+.+-. ..+. .+ ......+.+ +++.++.|+
T Consensus 243 ~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~~~--~~~~~~~~h~~~v~~~~~spdg~~l~s~~ 315 (435)
T 4e54_B 243 LWNLRMHKKKVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVRGK--ASFLYSLPHRHPVNAACFSPDGARLLTTD 315 (435)
T ss_dssp CCCSBCCSSCEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCCSS--SCCSBCCBCSSCEEECCBCTTSSEEEEEE
T ss_pred eEEEecccceEEeeeecCCCceEEEEecCc-----ceeeEEeccccccc--ceEEEeeeccccccceeECCCCCeeEEEc
Confidence 2222211112222333 23466667654 35667887654311 1111 01 111122222 566666776
Q ss_pred cCCCCCccEEEEEeCCCC
Q psy11771 292 NDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~ 309 (347)
.++ .+.+||..+.
T Consensus 316 ~D~-----~i~iwd~~~~ 328 (435)
T 4e54_B 316 QKS-----EIRVYSASQW 328 (435)
T ss_dssp SSS-----CEEEEESSSS
T ss_pred CCC-----EEEEEECCCC
Confidence 543 4777877653
No 167
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=89.94 E-value=6.8 Score=37.76 Aligned_cols=63 Identities=8% Similarity=0.037 Sum_probs=37.2
Q ss_pred CeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCC-cEEEc
Q psy11771 252 SSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLN-KWQLL 314 (347)
Q Consensus 252 ~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~ 314 (347)
..++.+|..+.+-..+............+.+ +++..+++..+.......++.+|+.+. ++..+
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 5789999998876665432222222233444 565444444433333457999999888 66654
No 168
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=89.90 E-value=3.4 Score=35.32 Aligned_cols=151 Identities=8% Similarity=0.005 Sum_probs=71.0
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCC-CCcEEeCCCCCCCccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeCC--CCcE
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPL-TGVWSSCPAMTTRRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDPR--MGKW 217 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~--~~~W 217 (347)
+.+|+.++.+ ..+.+||.. +.+.+.+...+.......++.. + ..+|+.+... ..+..|+.. +.++
T Consensus 5 ~~l~~~~~~~-----~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-----~~v~~~~~~~~~~~~ 74 (343)
T 1ri6_A 5 QTVYIASPES-----QQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPE-----FRVLAYRIAPDDGAL 74 (343)
T ss_dssp EEEEEEEGGG-----TEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCE
T ss_pred EEEEEeCCCC-----CeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCC-----CeEEEEEecCCCCce
Confidence 3566664432 457777763 4444433222222222222222 3 4577665421 457777765 6777
Q ss_pred EecCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCC-eEEEcCCCCCCCcceEEEEE-CC-EEEEEecc
Q psy11771 218 APVPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRN-SWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGN 292 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~ 292 (347)
+.+..++.......++. -++ .||+.+..+ ..+..||..+. ....+...+.....+.++.. ++ .||+.+..
T Consensus 75 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 75 TFAAESALPGSLTHISTDHQGQFVFVGSYNA-----GNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp EEEEEEECSSCCSEEEECTTSSEEEEEETTT-----TEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGG
T ss_pred eeccccccCCCCcEEEEcCCCCEEEEEecCC-----CeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCC
Confidence 76544332222223333 244 466665322 46788887322 22222222221112223333 33 57766522
Q ss_pred CCCCCccEEEEEeCCC-CcEEE
Q psy11771 293 DGSSSLNSVEKYDPKL-NKWQL 313 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~-~~W~~ 313 (347)
...+.+||..+ .+...
T Consensus 150 -----~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 150 -----QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp -----GTEEEEEEECTTSCEEE
T ss_pred -----CCEEEEEEecCCCceee
Confidence 23688888876 65543
No 169
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=89.82 E-value=6.5 Score=33.75 Aligned_cols=104 Identities=13% Similarity=0.114 Sum_probs=58.3
Q ss_pred CEEEEEcCcCCCCccceEEEEeCCCCcEEe-cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 190 NCLYALGGFDSTNYQASVERLDPRMGKWAP-VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 190 ~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
+.+++.|+.+ ..+..||..+.+-.. +.. ....-.++... ++.+++.|+.+ ..+..||..+.+-..
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVG--HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEES--CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecC--CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEE
Confidence 5677777644 468889987664322 211 11111222222 56777777764 468899998776443
Q ss_pred c-CCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 267 I-APMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 267 ~-~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
. ..+.........+.+ ++..++.|+.++ .+.+||..+.+
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg-----~i~i~d~~~~~ 194 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMDH-----SLKLWRINSKR 194 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETTS-----CEEEEESCSHH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCCC-----CEEEEECCCCc
Confidence 3 222222222333333 466677777543 58899987653
No 170
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=89.78 E-value=3.4 Score=35.64 Aligned_cols=148 Identities=11% Similarity=0.050 Sum_probs=71.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCC-CcE-EeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLT-GVW-SSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W-~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
+++.+++|+.+ ..+.+||..+ ..- ..+..... .-.+++.. ++..++.|+.+ ..+..||..+.+..
T Consensus 186 ~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d-----~~i~v~d~~~~~~~ 253 (369)
T 3zwl_B 186 KGKYIIAGHKD-----GKISKYDVSNNYEYVDSIDLHEK--SISDMQFSPDLTYFITSSRD-----TNSFLVDVSTLQVL 253 (369)
T ss_dssp GGCEEEEEETT-----SEEEEEETTTTTEEEEEEECCSS--CEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCcEeEEEEecCCC--ceeEEEECCCCCEEEEecCC-----ceEEEEECCCCcee
Confidence 45566666644 4688999887 332 22211111 11122222 55555666533 46888998876543
Q ss_pred ecCCCCCCCcceEEE-EECCEEEEEcccCCCc---------cCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEE
Q psy11771 219 PVPSMSSRRSSCGVA-ALDGAIYCVGGNDGTM---------CMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYL 286 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~---------~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~l 286 (347)
..-....+ ...++ .-++...++|+.++.. ....+..||..+.+=... +.........+.+ ++++
T Consensus 254 ~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 254 KKYETDCP--LNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR--VQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp EEEECSSC--EEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSE
T ss_pred eeecCCCC--ceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh--eecccCcEEEEEECCCCCE
Confidence 32221111 12222 2245555555543211 112677888876542211 1111122233344 6777
Q ss_pred EEEeccCCCCCccEEEEEeCCCCc
Q psy11771 287 LTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 287 yv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
++.|+.++ .+.+||.++..
T Consensus 330 l~s~~~dg-----~v~iw~~~~~~ 348 (369)
T 3zwl_B 330 YASGGEDG-----FIRLHHFEKSY 348 (369)
T ss_dssp EEEEETTS-----EEEEEEECHHH
T ss_pred EEEEcCCC-----eEEEEECcccc
Confidence 77777543 57888876543
No 171
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=89.74 E-value=10 Score=36.95 Aligned_cols=165 Identities=13% Similarity=0.044 Sum_probs=89.5
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEeCCCC--c-EEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCC--
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYDPLTG--V-WSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRM-- 214 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~--~-W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~-- 214 (347)
..+++..++...+.....+.++.+|..+. . |..+......... .+...++.+|+....+ .....++.+|..+
T Consensus 276 SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 276 SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDG--APLKKIVRVDLSGST 352 (741)
T ss_dssp CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTT--CTTCEEEEEECSSSS
T ss_pred CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCC--CCCCEEEEEeCCCCc
Confidence 34554434433322223467999998776 6 7766543322222 2334577888875432 2246789999887
Q ss_pred CcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CC-EEEEEe-
Q psy11771 215 GKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EG-YLLTMG- 290 (347)
Q Consensus 215 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~-~lyv~G- 290 (347)
..|+.+-+-.... .......++.+++....++ ...++.+|.....-..+. +|.... ...+.. ++ .|++..
T Consensus 353 ~~~~~l~~~~~~~-l~~~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~~~~-v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 353 PRFDTVVPESKDN-LESVGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAVS-LPGIGS-ASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp CEEEEEECCCSSE-EEEEEEEBTEEEEEEEETT---EEEEEEEETTSCEEEECB-CSSSCE-EEEEECCBTCSCEEEEEE
T ss_pred cccEEEecCCCCe-EEEEEEECCEEEEEEEECC---EEEEEEEeCCCCceeecc-CCCCeE-EEEeecCCCCCEEEEEEc
Confidence 5798775322221 2233344788877765432 256888887655444433 222111 122222 33 344432
Q ss_pred ccCCCCCccEEEEEeCCCCcEEEccC
Q psy11771 291 GNDGSSSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 291 G~~~~~~~~~v~~yd~~~~~W~~~~~ 316 (347)
+. ..-..++.||..+++.+.+..
T Consensus 427 s~---~~P~~i~~~d~~tg~~~~l~~ 449 (741)
T 1yr2_A 427 SF---TQPATVLALDPATAKTTPWEP 449 (741)
T ss_dssp ET---TEEEEEEEEETTTTEEEECSC
T ss_pred CC---CCCCEEEEEECCCCcEEEEec
Confidence 22 123579999999988877754
No 172
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.72 E-value=5.4 Score=35.17 Aligned_cols=147 Identities=12% Similarity=0.075 Sum_probs=74.4
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCC-----CccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTT-----RRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~-----~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
+.+++.|+.+ ..+.+||..+.+....-.... ...-.+++.. + ..+++.|+.++. ...+..||..+.
T Consensus 178 ~~~l~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~--~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSS-----NFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDN--DPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSS-----SCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSS--SCCCCEEETTST
T ss_pred CcEEEEEcCC-----CCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCC--CceEEEEeCCCC
Confidence 5677777754 358889988876433222211 1112223332 2 246666664321 126788888764
Q ss_pred cEEecCCCC--CCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEE-cCCCCCCCcceEEEEE-CC-EEEE
Q psy11771 216 KWAPVPSMS--SRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP-IAPMLSRRSTHEVVNI-EG-YLLT 288 (347)
Q Consensus 216 ~W~~~~~~p--~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~-~lyv 288 (347)
. ..+..+. ....-.+++.. ++.+++.|+.+ ..+..||..+.+-.. +...... ...++.. ++ .+++
T Consensus 251 ~-~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d-----g~v~~wd~~~~~~~~~~~~~~~~--v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 251 N-TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRD-----NTVLLWNPESAEQLSQFPARGNW--CFKTKFAPEAPDLFA 322 (416)
T ss_dssp T-SCSBCCCSCCSSCEEEEEECSSCSSCEEEEESS-----SEEEEECSSSCCEEEEEECSSSC--CCCEEECTTCTTEEE
T ss_pred C-CCcEEeecCccCceeEEEeCCCCCCeEEEEeCC-----CCEEEeeCCCCccceeecCCCCc--eEEEEECCCCCCEEE
Confidence 3 1122222 11112223322 56777777754 468889987764322 1111111 1122222 44 6777
Q ss_pred EeccCCCCCccEEEEEeCCCC
Q psy11771 289 MGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 289 ~GG~~~~~~~~~v~~yd~~~~ 309 (347)
.|+.+ ..+.+||..+.
T Consensus 323 s~~~d-----~~i~iw~~~~~ 338 (416)
T 2pm9_A 323 CASFD-----NKIEVQTLQNL 338 (416)
T ss_dssp ECCSS-----SEEEEEESCCC
T ss_pred EEecC-----CcEEEEEccCC
Confidence 77754 35888887654
No 173
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.66 E-value=11 Score=33.59 Aligned_cols=143 Identities=14% Similarity=0.102 Sum_probs=80.0
Q ss_pred EEEEeCCC--CcEEeCCCCCCCccceEEEEE---CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCC---CCCC--C--
Q psy11771 160 MERYDPLT--GVWSSCPAMTTRRRYCRIAVV---ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPS---MSSR--R-- 227 (347)
Q Consensus 160 ~~~~d~~~--~~W~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~--r-- 227 (347)
+++++... .+|+...+......-.+++.. .+.||+.+.... .-..+++.+-...+|+.+.. ++.. +
T Consensus 33 l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~ 110 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGET 110 (394)
T ss_dssp EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----
T ss_pred eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccccc
Confidence 66676654 689875321222222334433 468888654211 11257777777789998863 2211 1
Q ss_pred -----cceEEEEE----CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCC---CC--------------CCcceEEEE
Q psy11771 228 -----SSCGVAAL----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPM---LS--------------RRSTHEVVN 281 (347)
Q Consensus 228 -----~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~---~~--------------~~~~~~~~~ 281 (347)
...+++.- .+.||+.+.. ..+++.+....+|+.+... |. ....+.++.
T Consensus 111 ~~~~~~i~~l~~~~~~~~~~l~~g~~~------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~ 184 (394)
T 3b7f_A 111 GRVVDHVFWLTPGHASEPGTWYAGTSP------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILV 184 (394)
T ss_dssp CCCCCEEEEEEECCTTSTTCEEEEEET------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEE
T ss_pred cccccceeEEEeCCCCCCCEEEEEecC------CcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEE
Confidence 11223332 5678876421 4688888888899987532 21 112233333
Q ss_pred E---CCEEEEEeccCCCCCccEEEEEeCCCCcEEEccC
Q psy11771 282 I---EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 282 ~---~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 316 (347)
- .+.||+.... ..+++.+....+|+.+..
T Consensus 185 d~~~~~~l~vg~~~------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 185 DPRDPKHLYIGMSS------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp CTTCTTCEEEEEET------BEEEEESSTTSSCEECCT
T ss_pred CCCCCCEEEEEECC------CCEEEECCCCCCceECCC
Confidence 2 2578875432 248888888899998753
No 174
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=89.65 E-value=8.6 Score=32.53 Aligned_cols=146 Identities=9% Similarity=0.012 Sum_probs=77.6
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.||++.-. ...+++||+.++...... .+. .-.+++.. ++++|+..+ ..+++||+.+.+++.+
T Consensus 24 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~-~~~--~~~~i~~~~dG~l~v~~~-------~~l~~~d~~~g~~~~~ 88 (297)
T 3g4e_A 24 SNSLLFVDIP-----AKKVCRWDSFTKQVQRVT-MDA--PVSSVALRQSGGYVATIG-------TKFCALNWKEQSAVVL 88 (297)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTCCEEEEE-CSS--CEEEEEEBTTSSEEEEET-------TEEEEEETTTTEEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEe-CCC--ceEEEEECCCCCEEEEEC-------CeEEEEECCCCcEEEE
Confidence 4688887543 257899999887654332 111 11223332 567776532 5789999999888776
Q ss_pred CCCCC--CCcceEEEEE--CCEEEEEcccCC------CccCCeEEEEECCCCeEEEcC-CCCCCCcceEEEEE-CC-EEE
Q psy11771 221 PSMSS--RRSSCGVAAL--DGAIYCVGGNDG------TMCMSSGERFNVRRNSWEPIA-PMLSRRSTHEVVNI-EG-YLL 287 (347)
Q Consensus 221 ~~~p~--~r~~~~~~~~--~~~iyv~GG~~~------~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~~-~~-~ly 287 (347)
...+. +........+ +|++|+..-... ......++++|+.. +...+. .+.. -.+++.. ++ .||
T Consensus 89 ~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~---pngi~~spdg~~ly 164 (297)
T 3g4e_A 89 ATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDI---SNGLDWSLDHKIFY 164 (297)
T ss_dssp EECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESB---EEEEEECTTSCEEE
T ss_pred EecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeecccc---ccceEEcCCCCEEE
Confidence 54321 1122222222 678887431111 11234788998864 333321 1111 1233333 33 688
Q ss_pred EEeccCCCCCccEEEEEeC--CCCcE
Q psy11771 288 TMGGNDGSSSLNSVEKYDP--KLNKW 311 (347)
Q Consensus 288 v~GG~~~~~~~~~v~~yd~--~~~~W 311 (347)
+.... .+.+++||. .+.+.
T Consensus 165 v~~~~-----~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 165 YIDSL-----SYSVDAFDYDLQTGQI 185 (297)
T ss_dssp EEEGG-----GTEEEEEEECTTTCCE
T ss_pred EecCC-----CCcEEEEeccCCCCcc
Confidence 87643 246888875 45443
No 175
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=89.63 E-value=4.9 Score=34.02 Aligned_cols=149 Identities=11% Similarity=0.162 Sum_probs=71.0
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--C--CEEEEEcCcCCCCccceEEEEeCCCCc-E
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--E--NCLYALGGFDSTNYQASVERLDPRMGK-W 217 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~--~~lyv~GG~~~~~~~~~~~~yd~~~~~-W 217 (347)
+.+++.|+.+ ..+.++|..+.+|..+..+.........+.. + +.+++.|+.+ ..+..||..+.. +
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d-----~~v~~wd~~~~~~~ 136 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD-----GKVSVVEFKENGTT 136 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEEBCSSSCB
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC-----CcEEEEEecCCCce
Confidence 5677777755 4678888887776544322221112222222 1 4555666543 456777776542 2
Q ss_pred EecCCCCCCCcceEEEEE---------------CCEEEEEcccCCCccCCeEEEEECCC--CeEEEcCCCCCCCcceEEE
Q psy11771 218 APVPSMSSRRSSCGVAAL---------------DGAIYCVGGNDGTMCMSSGERFNVRR--NSWEPIAPMLSRRSTHEVV 280 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~---------------~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~~~ 280 (347)
....-..... ....+.+ ++++++.|+.+ ..+..||..+ ..|.....+..-......+
T Consensus 137 ~~~~~~~h~~-~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D-----~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v 210 (297)
T 2pm7_B 137 SPIIIDAHAI-GVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQTYVLESTLEGHSDWVRDV 210 (297)
T ss_dssp CCEEEECCSS-CEEEEEECCCC------------CCEEEEEETT-----SCEEEEEEETTTTEEEEEEEECCCSSCEEEE
T ss_pred eeeeeecccC-ccceEeecCCcccccccCCCCCCcceEEEEcCC-----CcEEEEEEcCCCceEEEEEEecCCCCceEEE
Confidence 1000000000 0111111 23567777765 3566666544 3455443333222222334
Q ss_pred EE--C---CEEEEEeccCCCCCccEEEEEeCCC--CcEE
Q psy11771 281 NI--E---GYLLTMGGNDGSSSLNSVEKYDPKL--NKWQ 312 (347)
Q Consensus 281 ~~--~---~~lyv~GG~~~~~~~~~v~~yd~~~--~~W~ 312 (347)
.+ + +.+++.|+.++ .+.+||..+ ..|.
T Consensus 211 ~~sp~~~~~~~las~s~D~-----~v~iWd~~~~~~~~~ 244 (297)
T 2pm7_B 211 AWSPTVLLRSYMASVSQDR-----TCIIWTQDNEQGPWK 244 (297)
T ss_dssp EECCCCSSSEEEEEEETTS-----CEEEEEESSTTSCCE
T ss_pred EECCCCCCceEEEEEECCC-----cEEEEEeCCCCCccc
Confidence 44 2 36777777543 477777655 3454
No 176
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.57 E-value=11 Score=33.86 Aligned_cols=155 Identities=8% Similarity=-0.055 Sum_probs=78.8
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEe--CCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSS--CPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+++++.|+.+ ..+.+||..+.+... +......-. +++..+++.++.|+.+ ..+..||..+.+....
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~~h~~~v~--~~~~sd~~~l~s~~~d-----~~v~vwd~~~~~~~~~ 277 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWLFGHKHFVS--SICCGKDYLLLSAGGD-----DKIFAWDWKTGKNLST 277 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEECCCCSSCEE--EEEECSTTEEEEEESS-----SEEEEEETTTCCEEEE
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeeecCCCCceE--EEEECCCCEEEEEeCC-----CeEEEEECCCCcEeee
Confidence 6777777754 357888877665322 111111111 1222266666666633 5688899887653221
Q ss_pred CCC------------------------CCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEEC--C-CCeEEEcCCCC
Q psy11771 221 PSM------------------------SSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNV--R-RNSWEPIAPML 271 (347)
Q Consensus 221 ~~~------------------------p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~--~-~~~W~~~~~~~ 271 (347)
-.. +.......++.. ++ .|++.++.+ ..+..||. . ..++..+..+.
T Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d-----~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 278 FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEAT-----KCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp EECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTC-----SEEEEEEECSSSTTCEEEEEEEE
T ss_pred ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCC-----CeEEEEEeccCCCCceeeccEec
Confidence 110 011111222222 34 444443222 56888887 3 34555554444
Q ss_pred CCCcceEEEEECCEEEEEeccCCC----CCccEEEEEeCCCCcEEEc
Q psy11771 272 SRRSTHEVVNIEGYLLTMGGNDGS----SSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 272 ~~~~~~~~~~~~~~lyv~GG~~~~----~~~~~v~~yd~~~~~W~~~ 314 (347)
.......++...+.+++..+.... ...-.++.++.++++|+..
T Consensus 353 ~~~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 353 FPYNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp CSSCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEEC
T ss_pred cCCceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEEc
Confidence 332333444556777777654321 1223677778888888633
No 177
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=89.51 E-value=9.6 Score=32.88 Aligned_cols=93 Identities=14% Similarity=0.262 Sum_probs=50.4
Q ss_pred ceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-
Q psy11771 205 ASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI- 282 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~- 282 (347)
..+..||..+.+-...-.-.... -.+++. -++.+++.|+.+ ..+..||..+..-... +.........+.+
T Consensus 164 ~~i~~wd~~~~~~~~~~~~h~~~-v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~~~~~--~~~h~~~v~~v~~~ 235 (340)
T 1got_B 164 TTCALWDIETGQQTTTFTGHTGD-VMSLSLAPDTRLFVSGACD-----ASAKLWDVREGMCRQT--FTGHESDINAICFF 235 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSC-EEEEEECTTSSEEEEEETT-----SCEEEEETTTCSEEEE--ECCCSSCEEEEEEC
T ss_pred CcEEEEECCCCcEEEEEcCCCCc-eEEEEECCCCCEEEEEeCC-----CcEEEEECCCCeeEEE--EcCCcCCEEEEEEc
Confidence 56888998877543221111111 122222 256777777765 4688889877643221 1111111223333
Q ss_pred -CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 283 -EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 283 -~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
++++++.|+.++ .+.+||..+.+
T Consensus 236 p~~~~l~s~s~d~-----~v~iwd~~~~~ 259 (340)
T 1got_B 236 PNGNAFATGSDDA-----TCRLFDLRADQ 259 (340)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTTE
T ss_pred CCCCEEEEEcCCC-----cEEEEECCCCc
Confidence 567777777543 58888887764
No 178
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=89.39 E-value=3 Score=36.66 Aligned_cols=147 Identities=17% Similarity=0.228 Sum_probs=72.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.+||..+.+-...-..+........... ++.+++.|+.+ ..+..||..+.+-..
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~v~~~d~~~~~~~~ 180 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRG-----PKVQLCDLKSGSCSH 180 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESS-----SSEEEEESSSSCCCE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCC-----CeEEEEeCCCcceee
Confidence 45567777654 4688889887764433222222221111111 33466666543 458888887653211
Q ss_pred cCCCCCCCcc-eEEEEE-CCE-EEEEcccCCCccCCeEEEEECCCCe--EEEcCC------------CCCCCcceEEEEE
Q psy11771 220 VPSMSSRRSS-CGVAAL-DGA-IYCVGGNDGTMCMSSGERFNVRRNS--WEPIAP------------MLSRRSTHEVVNI 282 (347)
Q Consensus 220 ~~~~p~~r~~-~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~------------~~~~~~~~~~~~~ 282 (347)
.+...... .+++.. ++. +++.|+.+ ..+..||..+.. ...+.. ..........+.+
T Consensus 181 --~~~~~~~~v~~~~~~~~~~~ll~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 181 --ILQGHRQEILAVSWSPRYDYILATASAD-----SRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp --EECCCCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred --eecCCCCcEEEEEECCCCCcEEEEEcCC-----CcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 11111111 222222 333 67777754 467888886542 111110 0111112223333
Q ss_pred --CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 283 --EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 283 --~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+++.++.|+.++ .+.+||..+.+
T Consensus 254 ~~~~~~l~~~~~dg-----~i~vwd~~~~~ 278 (408)
T 4a11_B 254 TSDGLHLLTVGTDN-----RMRLWNSSNGE 278 (408)
T ss_dssp CTTSSEEEEEETTS-----CEEEEETTTCC
T ss_pred cCCCCEEEEecCCC-----eEEEEECCCCc
Confidence 566677776543 58899987754
No 179
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=89.34 E-value=1.6 Score=35.18 Aligned_cols=103 Identities=13% Similarity=0.184 Sum_probs=58.5
Q ss_pred EEEECCEEEEEcCcCCCCccceEEEEeCCC---CcEEec----CCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEE
Q psy11771 185 IAVVENCLYALGGFDSTNYQASVERLDPRM---GKWAPV----PSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERF 257 (347)
Q Consensus 185 ~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~---~~W~~~----~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~y 257 (347)
++..++++|++-| +.+|+++... .-=..+ +.+|... .++....++++|++-| +..|+|
T Consensus 11 ~~~~~g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~w~glP~~i-DAa~~~~~g~~yfFkg-------~~yw~~ 75 (196)
T 3c7x_A 11 VAMLRGEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQFWRGLPASI-NTAYERKDGKFVFFKG-------DKHWVF 75 (196)
T ss_dssp EEEETTEEEEEET-------TEEEEEETTEECTTCSEEHHHHSTTCCSSC-CEEEECTTSCEEEEET-------TEEEEE
T ss_pred EEEcCCEEEEEEC-------CEEEEEECCccCCCCceEhhHhccCCCCCc-cEEEEeCCCcEEEecC-------CEEEEE
Confidence 4467899999987 6677776431 000111 2355422 2222224788999977 578888
Q ss_pred ECCCCeE---EEcCC----CCCCCcceEEEEE-CCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 258 NVRRNSW---EPIAP----MLSRRSTHEVVNI-EGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 258 d~~~~~W---~~~~~----~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
+..+... ..+.. +|.....++.... ++++|+|-| +..+.||..++
T Consensus 76 ~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~ 128 (196)
T 3c7x_A 76 DEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELR 128 (196)
T ss_dssp ETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTT
T ss_pred eCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCcc
Confidence 8542110 12222 3323333322222 689999988 46899998765
No 180
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=89.29 E-value=8.4 Score=32.51 Aligned_cols=29 Identities=21% Similarity=0.542 Sum_probs=19.0
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCCC-cEEEccC
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKLN-KWQLLTP 316 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~ 316 (347)
++++++.||.++ .+.+||..++ .|+.+..
T Consensus 317 ~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~ 346 (351)
T 3f3f_A 317 TGTILSSAGDDG-----KVRLWKATYSNEFKCMSV 346 (351)
T ss_dssp SSCCEEEEETTS-----CEEEEEECTTSCEEEEEE
T ss_pred CCCEEEEecCCC-----cEEEEecCcCcchhheee
Confidence 567777777543 4788887664 5766654
No 181
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=89.28 E-value=3.4 Score=40.61 Aligned_cols=129 Identities=10% Similarity=0.104 Sum_probs=69.1
Q ss_pred CCCcEEeCCCCCCCccceEEEE---ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC--CCCCCCcceEEEEE---CC
Q psy11771 166 LTGVWSSCPAMTTRRRYCRIAV---VENCLYALGGFDSTNYQASVERLDPRMGKWAPVP--SMSSRRSSCGVAAL---DG 237 (347)
Q Consensus 166 ~~~~W~~~~~~~~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~~~---~~ 237 (347)
.-++|+.+..++... .+.. -++.+|+.+. ..+++=.-.-.+|+.+. .+|.. ...+... ++
T Consensus 554 ~G~tW~~~~~~~~~~---~i~~~~~~~~~~~a~~~-------g~v~~S~DgG~tW~~~~~~~~p~~--~~~i~~~~~~~g 621 (737)
T 2cn3_A 554 NGNSWKVCTNLGMGA---VVASDRVNGKKFYAFYN-------GKFYISTDGGLTFTDTKAPQLPKS--VNKIKAVPGKEG 621 (737)
T ss_dssp TTSSCEECBTCCTTC---EEEECSSCTTCEEEEET-------TEEEEESSTTSBCEECCCSSCCSC--CSEEEEETTEEE
T ss_pred CCCCCccCCCCCCCc---eEEEEecCCCEEEEecC-------CEEEEECCCCcCcccccCCCCCCc--cceEEEEeCCCC
Confidence 346798887554331 1211 1456776641 33444333346799864 45542 2233333 46
Q ss_pred EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEE-E-C---CEEEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 238 AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVN-I-E---GYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 238 ~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~-~-~---~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
.+|+.+.. ..+++-+-...+|+++...+.. ....... . + +.||++|.... ...+++=+-.-.+|+
T Consensus 622 ~l~~~~~~------g~l~~S~D~G~tW~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~g~~g~---~~gl~~S~D~G~tW~ 691 (737)
T 2cn3_A 622 HVWLAARE------GGLWRSTDGGYTFEKLSNVDTA-HVVGFGKAAPGQDYMAIYITGKIDN---VLGFFRSDDAGKTWV 691 (737)
T ss_dssp EEEEECBT------TCEEEESSTTSSCEECTTCSEE-EEEEEECCCTTCSSCEEEEEEEETT---EEEEEEESSTTSSCE
T ss_pred EEEEEeCC------CcEEEEeCCCcccEECcCCCcc-ceEEEeecCCCCCCcEEEEEEecCC---cceEEEeCCCCCCCE
Confidence 88887643 3566666556799999754332 1111111 1 2 27999874321 123555555677899
Q ss_pred EccC
Q psy11771 313 LLTP 316 (347)
Q Consensus 313 ~~~~ 316 (347)
.+..
T Consensus 692 ~~~~ 695 (737)
T 2cn3_A 692 RIND 695 (737)
T ss_dssp ECSB
T ss_pred eccC
Confidence 9973
No 182
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=89.24 E-value=11 Score=33.38 Aligned_cols=157 Identities=13% Similarity=0.137 Sum_probs=89.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC---CCC--c-------cceEEEEE----CCEEEEEcCcCCCCccc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM---TTR--R-------RYCRIAVV----ENCLYALGGFDSTNYQA 205 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~---~~~--r-------~~~~~~~~----~~~lyv~GG~~~~~~~~ 205 (347)
++.||+.+.... .-..+++.+-...+|+++... +.. + .-.+++.. .+.+|+.+. ..
T Consensus 67 ~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~g 138 (394)
T 3b7f_A 67 PERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQ 138 (394)
T ss_dssp TTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TT
T ss_pred CCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEec------CC
Confidence 467887654210 012477777778899987532 211 1 11123332 467887542 14
Q ss_pred eEEEEeCCCCcEEecCCC---CC--------------CCcceEEEEE---CCEEEEEcccCCCccCCeEEEEECCCCeEE
Q psy11771 206 SVERLDPRMGKWAPVPSM---SS--------------RRSSCGVAAL---DGAIYCVGGNDGTMCMSSGERFNVRRNSWE 265 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~~---p~--------------~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 265 (347)
.+++.+-...+|+.+... |. ....++++.- .+.||+.... ..+++.+....+|+
T Consensus 139 gl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~------ggl~~s~DgG~tW~ 212 (394)
T 3b7f_A 139 GLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSS------GGVFESTDAGTDWK 212 (394)
T ss_dssp EEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEET------BEEEEESSTTSSCE
T ss_pred cEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECC------CCEEEECCCCCCce
Confidence 578887778899987532 21 1122344332 3578876432 24778877788999
Q ss_pred EcCCC------CCC-----CcceEEEEE-C--CEEEEEeccCCCCCccEEEEEeCCCCcEEEccC-CCC
Q psy11771 266 PIAPM------LSR-----RSTHEVVNI-E--GYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTP-MLT 319 (347)
Q Consensus 266 ~~~~~------~~~-----~~~~~~~~~-~--~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~-~~~ 319 (347)
.+..- |.. ...+.++.. + +.||+-.+ ..+++++....+|+.+.. ++.
T Consensus 213 ~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~-------~gl~~s~D~G~tW~~~~~~l~~ 274 (394)
T 3b7f_A 213 PLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNH-------CGIYRMDRREGVWKRIGDAMPR 274 (394)
T ss_dssp ECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEET-------TEEEEEETTTTEEECGGGGSCT
T ss_pred ECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcC-------CeEEEeCCCCCcceECCCCCCC
Confidence 88531 211 123344443 2 67777432 358888888999999865 544
No 183
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.09 E-value=11 Score=33.58 Aligned_cols=93 Identities=19% Similarity=0.178 Sum_probs=53.5
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceE-EEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCR-IAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL 235 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~-~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 235 (347)
+.+.++|..+++..++-.+........ ++.. ++..++.|+.+ ..+..||..+.+-...-.-... .......
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~~~h~~--~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHSA--RVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEECCCSS--CEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEEeCCCC--ceEEEee
Confidence 568899998887665444333322222 2222 56677777654 4588899887754332221222 2334556
Q ss_pred CCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 236 DGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
++.+.+.|+.+ ..+..+|....
T Consensus 198 ~~~~l~sgs~d-----~~i~~~d~~~~ 219 (420)
T 4gga_A 198 NSYILSSGSRS-----GHIHHHDVRVA 219 (420)
T ss_dssp ETTEEEEEETT-----SEEEEEETTSS
T ss_pred CCCEEEEEeCC-----CceeEeeeccc
Confidence 77777777754 45666776543
No 184
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.05 E-value=7.9 Score=37.88 Aligned_cols=145 Identities=11% Similarity=0.074 Sum_probs=73.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCC-cEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc--
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTG-VWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK-- 216 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-- 216 (347)
++..++.|+.+ ..+.+||..++ .....-.- ....-.+++.. ++..++.|+.+ ..+..||..+.+
T Consensus 108 ~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~~-~~~~v~~~~~~p~~~~~l~~~~~d-----g~v~vwd~~~~~~~ 176 (814)
T 3mkq_A 108 TKPYVLSGSDD-----LTVKLWNWENNWALEQTFEG-HEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPN 176 (814)
T ss_dssp SSSEEEEEETT-----SEEEEEEGGGTSEEEEEEEC-CSSCEEEEEEETTEEEEEEEEETT-----SEEEEEETTCSSCS
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCceEEEEEcC-CCCcEEEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCcce
Confidence 45555566643 45788887765 22211111 11111223333 45667776643 468888876543
Q ss_pred EEecCCCCCCCcceEEEE-E--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEec
Q psy11771 217 WAPVPSMSSRRSSCGVAA-L--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGG 291 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~-~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG 291 (347)
+........+ ...++. . ++..+++|+.+ ..+..||..+.+-... +.........+.+ ++.+++.|+
T Consensus 177 ~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 177 FTLTTGQERG--VNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVAT--LEGHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp EEEECCCTTC--CCEEEECCSTTCCEEEEECTT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECSSSSEEEEEE
T ss_pred eEEecCCCCC--EEEEEEEECCCCCEEEEEeCC-----CEEEEEECCCCcEEEE--EcCCCCCEEEEEEcCCCCEEEEEe
Confidence 2222211111 122222 2 66677777654 4788999887653221 1111112223333 566777777
Q ss_pred cCCCCCccEEEEEeCCCCcE
Q psy11771 292 NDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W 311 (347)
.++ .+.+||..+.+-
T Consensus 248 ~dg-----~v~vwd~~~~~~ 262 (814)
T 3mkq_A 248 EDG-----TLKIWNSSTYKV 262 (814)
T ss_dssp TTS-----CEEEEETTTCSE
T ss_pred CCC-----eEEEEECCCCcE
Confidence 543 588888876543
No 185
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=88.97 E-value=12 Score=33.32 Aligned_cols=149 Identities=13% Similarity=0.042 Sum_probs=77.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.+||..+.+-.. +...+....-.+++.. ++..++.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46777777754 468899998766422 2111111111222222 56666777644 458899998765433
Q ss_pred cCCCCCCCcceEEEEE-----CCEEEEEcccCCCccCCeEEEEECCCCeEEEc-C-C---C------C------------
Q psy11771 220 VPSMSSRRSSCGVAAL-----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI-A-P---M------L------------ 271 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~-~---~------~------------ 271 (347)
.-.++....-.+++.. ++.+++.|+.+ ..+..||..+.+-... . . . |
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 325 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCG 325 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCC
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecc
Confidence 2111111111122111 34566666543 4688889887653221 1 0 0 0
Q ss_pred --CCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 272 --SRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 272 --~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.......++..++++++.||.+ ..+.+||..+.+
T Consensus 326 ~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 361 (437)
T 3gre_A 326 IRSLNALSTISVSNDKILLTDEAT-----SSIVMFSLNELS 361 (437)
T ss_dssp CCSGGGGCCEEEETTEEEEEEGGG-----TEEEEEETTCGG
T ss_pred cccCCceEEEEECCceEEEecCCC-----CeEEEEECCCcc
Confidence 0001122333478888888864 368889887654
No 186
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=88.83 E-value=0.54 Score=41.41 Aligned_cols=107 Identities=9% Similarity=0.132 Sum_probs=55.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCe-EE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNS-WE 265 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~-W~ 265 (347)
++++++.|+.+ ..+..||..++.|..+..+.........+.+ ++.+++.|+.+ ..+..||..+.. |.
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~vwd~~~~~~~~ 91 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD-----RNAYVYEKRPDGTWK 91 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT-----SSEEEC------CCC
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC-----CeEEEEEcCCCCcee
Confidence 45566666543 4577888888888887766543333333333 46667777654 468888888766 44
Q ss_pred EcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 266 PIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
....+.........+.+ ++++++.|+.++ .+.+||..+.+
T Consensus 92 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 133 (377)
T 3dwl_C 92 QTLVLLRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN 133 (377)
T ss_dssp CEEECCCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC----
T ss_pred eeeEecccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc
Confidence 33322222222333333 566777776543 47788877664
No 187
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=88.80 E-value=13 Score=33.48 Aligned_cols=107 Identities=6% Similarity=-0.120 Sum_probs=55.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe--CCCCCCCccc-eEE-EEEC---CEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS--CPAMTTRRRY-CRI-AVVE---NCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--~~~~~~~r~~-~~~-~~~~---~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
++..+++|+.+ ..++.++..+..... ...+...... .++ ..-+ ++.++.|+.+ ..+..||..+
T Consensus 160 ~~~~l~~~~~~-----g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~ 229 (450)
T 2vdu_B 160 DDTTVIIADKF-----GDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQ 229 (450)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESC
T ss_pred CCCEEEEEeCC-----CcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCC
Confidence 45555666543 457788876554321 1112111111 122 2235 7777777654 4688888876
Q ss_pred CcEEec-CCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 215 GKWAPV-PSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 215 ~~W~~~-~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
.+.... ..-........... ++.+++.|+.+ ..+..||..+.+.
T Consensus 230 ~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 230 CFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKN 274 (450)
T ss_dssp TTCEEEECCCCSSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCE
T ss_pred CceeeeeecCCCCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcE
Confidence 543221 11111111122222 77777777754 5788999887764
No 188
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.72 E-value=3.2 Score=35.65 Aligned_cols=146 Identities=13% Similarity=0.174 Sum_probs=71.6
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccc-eEEEEE-C--CEEEEEcCcCCCCccceEEEEeCCCC-cE
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRY-CRIAVV-E--NCLYALGGFDSTNYQASVERLDPRMG-KW 217 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~-~~~~~~-~--~~lyv~GG~~~~~~~~~~~~yd~~~~-~W 217 (347)
+.+++.|+.+ ..+.++|..+.+|.....+...... .+++.. + +.+++.|+.+ ..+..||..+. .|
T Consensus 71 ~~~l~s~s~D-----~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~~ 140 (316)
T 3bg1_A 71 GNILASCSYD-----RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQW 140 (316)
T ss_dssp SSCEEEEETT-----SCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSCE
T ss_pred CCEEEEEECC-----CEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCCc
Confidence 5666777755 3578888887766443322211111 122222 2 4566666644 45677777654 56
Q ss_pred EecCCCCCCCcceEEEEE-------------------CCEEEEEcccCCCccCCeEEEEECC-CCeEEEcCCCCCCCcce
Q psy11771 218 APVPSMSSRRSSCGVAAL-------------------DGAIYCVGGNDGTMCMSSGERFNVR-RNSWEPIAPMLSRRSTH 277 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~-------------------~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~~~~~ 277 (347)
.....+.........+.+ .+++++.||.+ ..+..||.. ...|..+..+..-....
T Consensus 141 ~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~~~~~~~~l~~h~~~V 215 (316)
T 3bg1_A 141 EVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD-----NLIKLWKEEEDGQWKEEQKLEAHSDWV 215 (316)
T ss_dssp EECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT-----SBCCEEEECTTSCEEEEECCBCCSSCE
T ss_pred ceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC-----CeEEEEEeCCCCccceeeecccCCCce
Confidence 543322111100001111 12456666654 355667765 34576665544322222
Q ss_pred EEEEE--C----CEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 278 EVVNI--E----GYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 278 ~~~~~--~----~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
..+.+ + +.+++.|+.+ ..+.+||..+
T Consensus 216 ~~v~~sp~~~~~~~~las~s~D-----~~v~iw~~~~ 247 (316)
T 3bg1_A 216 RDVAWAPSIGLPTSTIASCSQD-----GRVFIWTCDD 247 (316)
T ss_dssp EEEECCCCSSCSCCEEEEEETT-----CEEEEEECSS
T ss_pred EEEEecCCCCCCCceEEEEcCC-----CeEEEEEccC
Confidence 33333 2 2566666654 3577787655
No 189
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=88.71 E-value=11 Score=32.35 Aligned_cols=103 Identities=13% Similarity=0.076 Sum_probs=55.5
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSS-CPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
+.+++.|+.+ ..+.+||..+.+-.. +... ...-.+++.. ++.+++.|+.+ ..+..||..+.+-..
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 152 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYVGH--GNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDTLVA 152 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEESC--CSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeecCC--CCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCeEEE
Confidence 5677777755 368888887765322 1111 1111122222 55666777643 468899998765433
Q ss_pred c-CCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 220 V-PSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 220 ~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
. ..+.........+.+ ++..++.|+.+ ..+..||..+.
T Consensus 153 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~ 193 (366)
T 3k26_A 153 IFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSK 193 (366)
T ss_dssp EECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSH
T ss_pred EecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCC
Confidence 2 221222222222332 45666667654 46888888764
No 190
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=88.63 E-value=9.1 Score=31.44 Aligned_cols=99 Identities=12% Similarity=0.068 Sum_probs=59.6
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCC----CcEEe--------CCCCCCC--ccceEEEE---ECCEEEEEcCcCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLT----GVWSS--------CPAMTTR--RRYCRIAV---VENCLYALGGFDSTNY 203 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~----~~W~~--------~~~~~~~--r~~~~~~~---~~~~lyv~GG~~~~~~ 203 (347)
.++++|+|-| +.+|+||..+ +.... .+.+|.. .....+|. .++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG------ 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKG------ 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEET------
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeC------
Confidence 5899999988 6789997532 22211 1222321 01223333 2689999988
Q ss_pred cceEEEEeCCCCcEEecC-----CCCC------CCcceEEEE--ECCEEEEEcccCCCccCCeEEEEECC
Q psy11771 204 QASVERLDPRMGKWAPVP-----SMSS------RRSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVR 260 (347)
Q Consensus 204 ~~~~~~yd~~~~~W~~~~-----~~p~------~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~ 260 (347)
+..|+||..+++...-| ..|. +..--++.. .++++|++-| +..|+||..
T Consensus 136 -~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 197 (225)
T 3oyo_A 136 -NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYVRIDFT 197 (225)
T ss_dssp -TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEEEEECC
T ss_pred -CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 67899997766554311 1221 222233344 3789999988 688999998
No 191
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.51 E-value=9.1 Score=36.51 Aligned_cols=149 Identities=8% Similarity=-0.025 Sum_probs=80.9
Q ss_pred CeEEEEeCCC------CcEEeCC-CCCCCccceEEEEECC-EEEEEcCcCCC-C-ccceEEEEeCC-CC---cEEecCCC
Q psy11771 158 SSMERYDPLT------GVWSSCP-AMTTRRRYCRIAVVEN-CLYALGGFDST-N-YQASVERLDPR-MG---KWAPVPSM 223 (347)
Q Consensus 158 ~~~~~~d~~~------~~W~~~~-~~~~~r~~~~~~~~~~-~lyv~GG~~~~-~-~~~~~~~yd~~-~~---~W~~~~~~ 223 (347)
.+++.+|..+ .+.+.+. .-.. ........-++ .|++....... . ...+++.+|.. +. ....+..-
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAHR-FVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCSS-EECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCCC-cccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 5689999988 6665554 2221 11111222355 44444322111 1 13579999998 56 34443321
Q ss_pred CCCCcceEEE-EECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCc-------ceEEEEE-CCEEEEEeccCC
Q psy11771 224 SSRRSSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRS-------THEVVNI-EGYLLTMGGNDG 294 (347)
Q Consensus 224 p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~-------~~~~~~~-~~~lyv~GG~~~ 294 (347)
... .....+ .-+|++|+.+..++ ...++.+|+.+.++..+.+...... ....+.. ++++++.+.. +
T Consensus 240 ~~~-~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~ 314 (662)
T 3azo_A 240 PEE-AIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G 314 (662)
T ss_dssp TTB-CEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S
T ss_pred CCc-eEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C
Confidence 111 112222 23677777765432 2479999998888988765332110 1123333 6777776654 2
Q ss_pred CCCccEEEEEeCCCCcEEEcc
Q psy11771 295 SSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~W~~~~ 315 (347)
...++.+|..+.+.+.+.
T Consensus 315 ---~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 315 ---AAVLGILDPESGELVDAA 332 (662)
T ss_dssp ---SCEEEEEETTTTEEEECC
T ss_pred ---ccEEEEEECCCCcEEEec
Confidence 357888898888776664
No 192
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=88.46 E-value=10 Score=32.41 Aligned_cols=135 Identities=12% Similarity=0.040 Sum_probs=70.6
Q ss_pred CeEEEEeCCCCcEEeCC-CCCCCccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeCCCC---cEEecCCCCCCCcceE
Q psy11771 158 SSMERYDPLTGVWSSCP-AMTTRRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDPRMG---KWAPVPSMSSRRSSCG 231 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~-~~~~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~ 231 (347)
..+++||+.+.+...+. .+. ....++.. + +.+||.-.. ...+++|++... ..+....++- -..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~---~p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g---P~g 233 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELH---VPGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN---PGN 233 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEES---CCCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS---EEE
T ss_pred ceEEEEeCCCCEEEEeccCCc---cCcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC---CCC
Confidence 46899999877654432 111 12233333 3 368887431 357899998752 3333322221 122
Q ss_pred EEE-ECCEEEEEcccCCC-----ccCCeEEEEECCCCeEEEcCCCCC---CCcceEEEEECCEEEEEeccCCCCCccEEE
Q psy11771 232 VAA-LDGAIYCVGGNDGT-----MCMSSGERFNVRRNSWEPIAPMLS---RRSTHEVVNIEGYLLTMGGNDGSSSLNSVE 302 (347)
Q Consensus 232 ~~~-~~~~iyv~GG~~~~-----~~~~~v~~yd~~~~~W~~~~~~~~---~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~ 302 (347)
++. -+|.||+....... .....+.+||+....-..+.. +. .....+++.-+++||+.+.. .+.+.
T Consensus 234 i~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~-~~g~~~~~~~~~~~~~g~L~v~~~~-----~~~i~ 307 (322)
T 2fp8_A 234 IKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPL-PPPFAGEHFEQIQEHDGLLYIGTLF-----HGSVG 307 (322)
T ss_dssp EEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEEC-CTTTTTSCCCEEEEETTEEEEECSS-----CSEEE
T ss_pred eEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEEC-CCCCccccceEEEEeCCEEEEeecC-----CCceE
Confidence 332 25789988543110 112468899997654444432 21 11222344458999987532 24688
Q ss_pred EEeCCCC
Q psy11771 303 KYDPKLN 309 (347)
Q Consensus 303 ~yd~~~~ 309 (347)
+|++..+
T Consensus 308 ~~~~~~~ 314 (322)
T 2fp8_A 308 ILVYDKK 314 (322)
T ss_dssp EEEC---
T ss_pred EEecccc
Confidence 8987644
No 193
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=88.41 E-value=1.9 Score=42.44 Aligned_cols=106 Identities=15% Similarity=0.143 Sum_probs=64.7
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
++..++.||.+ ..+..||..++++..+..+.........+.+ + +..++.|+.+ ..+..||..+++|
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D-----g~I~vwd~~~~~~ 89 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD-----GKVLIWKEENGRW 89 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT-----SCEEEEEEETTEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC-----CeEEEEECCCCcc
Confidence 34555556543 4678888877777666544432222333333 3 6677777764 4688899999888
Q ss_pred EEcCCCCCCCcceEEEEE--C--CEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 265 EPIAPMLSRRSTHEVVNI--E--GYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~--~--~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
..+..+.........+.+ + +.+++.|+.+ ..+.+||..+.
T Consensus 90 ~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~d-----g~I~vwdl~~~ 133 (753)
T 3jro_A 90 SQIAVHAVHSASVNSVQWAPHEYGPLLLVASSD-----GKVSVVEFKEN 133 (753)
T ss_dssp EEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----SEEEEEECCSS
T ss_pred cccccccCCCCCeEEEEECCCCCCCEEEEEeCC-----CcEEEEEeecC
Confidence 776655433333444444 3 6677777754 36888887665
No 194
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.15 E-value=20 Score=34.94 Aligned_cols=144 Identities=10% Similarity=0.048 Sum_probs=80.6
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
.++.|||... +-+.+||+.++++...... ....-.++...++.||+... ..+++||+.+++++..
T Consensus 72 ~~g~lWigT~-------~Gl~~yd~~~~~f~~~~~~-~~~~i~~i~~~~g~lWigt~-------~Gl~~~~~~~~~~~~~ 136 (758)
T 3ott_A 72 DNTYLYMGTD-------NGILVYNYRADRYEQPETD-FPTDVRTMALQGDTLWLGAL-------NGLYTYQLQSRKLTSF 136 (758)
T ss_dssp TTTEEEEEET-------TEEEEEETTTTEECCCSCC-CCSCEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCCcEEEEeC-------CCeEEEeCCCCEEECcccC-CCceEEEEEecCCcEEEEcC-------CcceeEeCCCCeEEEe
Confidence 3677887532 3578999999887652111 11111223345788888532 3589999998888766
Q ss_pred C----CCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCC----CCcceEEEEE-C-CEEEEE
Q psy11771 221 P----SMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLS----RRSTHEVVNI-E-GYLLTM 289 (347)
Q Consensus 221 ~----~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~----~~~~~~~~~~-~-~~lyv~ 289 (347)
. .++... -.++..- ++.||+... .-+++||+.+++++....... .....+++.- + +.|+|-
T Consensus 137 ~~~~~~l~~~~-i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 137 DTRRNGLPNNT-IYSIIRTKDNQIYVGTY-------NGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp CHHHHCCSCSC-EEEEEECTTCCEEEEET-------TEEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred ccCCCCcCCCe-EEEEEEcCCCCEEEEeC-------CCHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEE
Confidence 2 233221 1223332 678887421 358899999988876532111 1111223332 2 456762
Q ss_pred eccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 290 GGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 290 GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
. . ..+.+||+.++++...
T Consensus 209 t-~------~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 209 T-E------GYLFQYFPSTGQIKQT 226 (758)
T ss_dssp E-E------EEEEEEETTTTEEEEE
T ss_pred E-C------CCCeEEcCCCCeEEec
Confidence 2 1 1367788777776654
No 195
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=88.14 E-value=6.3 Score=40.94 Aligned_cols=144 Identities=15% Similarity=0.161 Sum_probs=75.1
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.+++.++.||.+ ..+.+||..+.+-... +....... +++.. +++..+.|+.+ ..+..||..+.+..
T Consensus 625 ~~~~~l~s~~~d-----~~i~vw~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd~~~~~~~ 692 (1249)
T 3sfz_A 625 QDGQRIASCGAD-----KTLQVFKAETGEKLLD--IKAHEDEVLCCAFSSDDSYIATCSAD-----KKVKIWDSATGKLV 692 (1249)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCCEEEE--eccCCCCEEEEEEecCCCEEEEEeCC-----CeEEEEECCCCceE
Confidence 366777777754 3588899888754221 11111112 22222 55666666633 56889999877543
Q ss_pred ecCCCCCCCcceEEEEE----CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecc
Q psy11771 219 PVPSMSSRRSSCGVAAL----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~ 292 (347)
..-.-.. .....+.+ ++.+.+.|+.+ ..+..||..+.+-...-. ........+.+ +++.++.|+.
T Consensus 693 ~~~~~~~--~~v~~~~~~~~~~~~~l~sg~~d-----~~v~vwd~~~~~~~~~~~--~h~~~v~~~~~sp~~~~l~s~s~ 763 (1249)
T 3sfz_A 693 HTYDEHS--EQVNCCHFTNKSNHLLLATGSND-----FFLKLWDLNQKECRNTMF--GHTNSVNHCRFSPDDELLASCSA 763 (1249)
T ss_dssp EEEECCS--SCEEEEEECSSSSCCEEEEEETT-----SCEEEEETTSSSEEEEEC--CCSSCEEEEEECSSTTEEEEEES
T ss_pred EEEcCCC--CcEEEEEEecCCCceEEEEEeCC-----CeEEEEECCCcchhheec--CCCCCEEEEEEecCCCEEEEEEC
Confidence 3211111 11222222 33455556543 468889988775432211 11111223333 5666777765
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
+ ..+.+||..+.+
T Consensus 764 d-----g~v~vwd~~~~~ 776 (1249)
T 3sfz_A 764 D-----GTLRLWDVRSAN 776 (1249)
T ss_dssp S-----SEEEEEEGGGTE
T ss_pred C-----CeEEEEeCCCCc
Confidence 4 358888876654
No 196
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=88.04 E-value=6.6 Score=34.13 Aligned_cols=110 Identities=14% Similarity=0.161 Sum_probs=53.2
Q ss_pred EEEEcccCCCC-CCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-EC-CEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 145 LYACGGYDGAS-CLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VE-NCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 145 lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
.+.+|.+.... ..-.++.+|..+.+++.+... .......++. -+ ..||+.+........-.++.+|..+.+.+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 33456554321 112356667888887665443 1111112222 23 45777765321111223455666667777665
Q ss_pred CCCC-CCcceEEEEECC-EEEEEcccCCCccCCeEEEEECCC
Q psy11771 222 SMSS-RRSSCGVAALDG-AIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 222 ~~p~-~r~~~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
..+. ......++. ++ .||+.+..+ ..+..|+...
T Consensus 94 ~~~~~~~~p~~~~~-dg~~l~~~~~~~-----~~v~~~~~~~ 129 (361)
T 3scy_A 94 TQKTMGADPCYLTT-NGKNIVTANYSG-----GSITVFPIGQ 129 (361)
T ss_dssp EEECSSSCEEEEEE-CSSEEEEEETTT-----TEEEEEEBCT
T ss_pred EeccCCCCcEEEEE-CCCEEEEEECCC-----CEEEEEEeCC
Confidence 4432 222233333 55 466654322 5678888764
No 197
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=87.91 E-value=9.5 Score=32.58 Aligned_cols=150 Identities=10% Similarity=0.115 Sum_probs=73.2
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-C---CEEEEEcCcCCCCccceEEEEeCCCCc--
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-E---NCLYALGGFDSTNYQASVERLDPRMGK-- 216 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~---~~lyv~GG~~~~~~~~~~~~yd~~~~~-- 216 (347)
..+++.|+.+. ....+.+||..+++............-.+++.. + +.+++.|+.+ ..+..||..+.+
T Consensus 31 ~~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~ 103 (357)
T 3i2n_A 31 AKFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIWNLEAPEMP 103 (357)
T ss_dssp SEEEEEEC--C--CCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEECTTSCSSC
T ss_pred ceEEEecCccC--CCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEEeCCCCCcc
Confidence 36666666411 024588888888765433222221111222222 2 3666666643 457888887654
Q ss_pred EEecCCCCCCCcceEEE-------EECCEEEEEcccCCCccCCeEEEEECCCCe--EEEcCCCCCC-CcceEEEE-----
Q psy11771 217 WAPVPSMSSRRSSCGVA-------ALDGAIYCVGGNDGTMCMSSGERFNVRRNS--WEPIAPMLSR-RSTHEVVN----- 281 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~-------~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~--W~~~~~~~~~-~~~~~~~~----- 281 (347)
-..+...... -.++. .-++..++.|+.+ ..+..||..+.. ...+...... ......+.
T Consensus 104 ~~~~~~~~~~--v~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 104 VYSVKGHKEI--INAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp SEEECCCSSC--EEEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred EEEEEecccc--eEEEeeccccccCCCccEEEEEeCC-----CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 1222211111 11221 1245566666654 468888887654 2333221111 11122222
Q ss_pred -ECCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 282 -IEGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 282 -~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
-++.+++.|+.+ ..+.+||..+.+-
T Consensus 177 ~~~~~~l~~~~~d-----~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 177 NQEERVVCAGYDN-----GDIKLFDLRNMAL 202 (357)
T ss_dssp C-CCCEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCCCCEEEEEccC-----CeEEEEECccCce
Confidence 356777777643 3688888877654
No 198
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=87.87 E-value=20 Score=34.56 Aligned_cols=172 Identities=12% Similarity=0.063 Sum_probs=86.3
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCC--------CccceEEEEe
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDST--------NYQASVERLD 211 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~--------~~~~~~~~yd 211 (347)
..+++.++++...+......++++|..+++......++.......+-.-+++.++++..... .....++.++
T Consensus 129 SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~ 208 (695)
T 2bkl_A 129 SWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHT 208 (695)
T ss_dssp CTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEE
T ss_pred CCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEE
Confidence 34666666544322233367999999998764112222222121222335555555443221 2345689999
Q ss_pred CCCCcE--EecCCCCCC-CcceEEE-EECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEE
Q psy11771 212 PRMGKW--APVPSMSSR-RSSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLL 287 (347)
Q Consensus 212 ~~~~~W--~~~~~~p~~-r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~ly 287 (347)
..+..- ..+...+.. ....+.. .-+|+..+++..... ....++.+|..+..|..+..-.... ...+..++.+|
T Consensus 209 l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~ 285 (695)
T 2bkl_A 209 LGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFY 285 (695)
T ss_dssp TTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEE
T ss_pred CCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEE
Confidence 887652 222222222 2222222 224544344332221 2357888887777787775422222 22233566665
Q ss_pred EEeccCCCCCccEEEEEeCCCCc---EEEccC
Q psy11771 288 TMGGNDGSSSLNSVEKYDPKLNK---WQLLTP 316 (347)
Q Consensus 288 v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~ 316 (347)
+....+ .....++.+|..+.+ |+.+-+
T Consensus 286 ~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~ 315 (695)
T 2bkl_A 286 VLTDEG--APRQRVFEVDPAKPARASWKEIVP 315 (695)
T ss_dssp EEECTT--CTTCEEEEEBTTBCSGGGCEEEEC
T ss_pred EEECCC--CCCCEEEEEeCCCCCccCCeEEec
Confidence 554322 123579999987654 877643
No 199
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=87.73 E-value=3.2 Score=36.70 Aligned_cols=151 Identities=15% Similarity=0.108 Sum_probs=76.4
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCc------EE-eCCCCC-CCccceEEEEE-C-CEEEEEcCcCCCCccceEEEEeC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGV------WS-SCPAMT-TRRRYCRIAVV-E-NCLYALGGFDSTNYQASVERLDP 212 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~------W~-~~~~~~-~~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~ 212 (347)
+.+++.|+.+ ..+.+||..+.+ -. ...... ....-.+++.. + +.+++.|+.+ ..+..||.
T Consensus 126 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~v~iwd~ 195 (416)
T 2pm9_A 126 DNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSS-----NFASIWDL 195 (416)
T ss_dssp TTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSS-----SCEEEEET
T ss_pred CCEEEEEcCC-----CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCC-----CCEEEEEC
Confidence 5677777754 357888887764 11 111111 11112223333 2 5677777643 45889999
Q ss_pred CCCcEEecCCCCC-----CCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC-CCCcceEEEEE--
Q psy11771 213 RMGKWAPVPSMSS-----RRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML-SRRSTHEVVNI-- 282 (347)
Q Consensus 213 ~~~~W~~~~~~p~-----~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~-- 282 (347)
.+.+-...-..+. .....+++.. ++ .+++.|+.++.. ..+..||..+.. ..+..+. ........+.+
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~--~~i~~~d~~~~~-~~~~~~~~~~~~~v~~~~~s~ 272 (416)
T 2pm9_A 196 KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND--PSILIWDLRNAN-TPLQTLNQGHQKGILSLDWCH 272 (416)
T ss_dssp TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS--CCCCEEETTSTT-SCSBCCCSCCSSCEEEEEECS
T ss_pred CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC--ceEEEEeCCCCC-CCcEEeecCccCceeEEEeCC
Confidence 8876443322221 1112223332 23 567777654211 267788887642 1111222 11122233333
Q ss_pred -CCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 283 -EGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 283 -~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
++++++.|+.+ ..+.+||..+.+-
T Consensus 273 ~~~~~l~s~~~d-----g~v~~wd~~~~~~ 297 (416)
T 2pm9_A 273 QDEHLLLSSGRD-----NTVLLWNPESAEQ 297 (416)
T ss_dssp SCSSCEEEEESS-----SEEEEECSSSCCE
T ss_pred CCCCeEEEEeCC-----CCEEEeeCCCCcc
Confidence 56777777754 3688888877643
No 200
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=87.60 E-value=13 Score=34.77 Aligned_cols=143 Identities=14% Similarity=0.121 Sum_probs=73.3
Q ss_pred EEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCcc---ce-EEEEE-C-CEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 145 LYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRR---YC-RIAVV-E-NCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 145 lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~---~~-~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
+++.|+.+ ..+.+||..+.+-.. .+..... .. +++.. + +..++.|+.+ ..+..||..+.+..
T Consensus 175 ~l~~~~~d-----~~v~vwd~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 242 (615)
T 1pgu_A 175 RSMTVGDD-----GSVVFYQGPPFKFSA--SDRTHHKQGSFVRDVEFSPDSGEFVITVGSD-----RKISCFDGKSGEFL 242 (615)
T ss_dssp EEEEEETT-----TEEEEEETTTBEEEE--EECSSSCTTCCEEEEEECSTTCCEEEEEETT-----CCEEEEETTTCCEE
T ss_pred EEEEEeCC-----CcEEEEeCCCcceee--eecccCCCCceEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCEe
Confidence 56666644 467888876654322 1211111 22 22222 4 5666666643 46889998876643
Q ss_pred ecC-CC--CCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC---CCCcceEEEEECCEEEEEecc
Q psy11771 219 PVP-SM--SSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML---SRRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 219 ~~~-~~--p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~---~~~~~~~~~~~~~~lyv~GG~ 292 (347)
..- .. .....-.+++..++..++.|+.+ ..+..||..+.+-...-..+ .......++.-++..++.|+.
T Consensus 243 ~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 317 (615)
T 1pgu_A 243 KYIEDDQEPVQGGIFALSWLDSQKFATVGAD-----ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSL 317 (615)
T ss_dssp EECCBTTBCCCSCEEEEEESSSSEEEEEETT-----SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEET
T ss_pred EEecccccccCCceEEEEEcCCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEEC
Confidence 322 10 11111122222277777777754 57889999877644332222 111111222225666666665
Q ss_pred CCCCCccEEEEEeCCCC
Q psy11771 293 DGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~ 309 (347)
++ .+.+||..+.
T Consensus 318 ~g-----~i~~~d~~~~ 329 (615)
T 1pgu_A 318 DG-----TLNFYELGHD 329 (615)
T ss_dssp TS-----CEEEEETTEE
T ss_pred CC-----CEEEEECCCC
Confidence 43 5788887653
No 201
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=87.34 E-value=1.5 Score=36.24 Aligned_cols=102 Identities=11% Similarity=0.074 Sum_probs=58.7
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEe--CCC-------------CcEEeCCCCC-CCccceEEEE-ECCEEEEEcCcCCCC
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYD--PLT-------------GVWSSCPAMT-TRRRYCRIAV-VENCLYALGGFDSTN 202 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d--~~~-------------~~W~~~~~~~-~~r~~~~~~~-~~~~lyv~GG~~~~~ 202 (347)
..++++|+|-| +.+|+|+ +.+ ..|..++.-. ......+... .++++|+|-|
T Consensus 70 ~~~g~~~fFKg-------~~~Wr~~~~~~~~~~~~~~gP~~I~~~w~gLp~~~~p~~IDAA~~~~~~~k~yfFkG----- 137 (227)
T 3lp9_A 70 TENNEAFIFYE-------NFCALIDYAPHSKKDKIILGPKKIADVFPFFEGTVFESGIDAAYRSTRGKEVYLFKG----- 137 (227)
T ss_dssp CSTTEEEEEET-------TEEEEEECCTTTCCCEEEEEEEEHHHHSGGGTTSTTTTCCSEEEECSSTTEEEEEET-----
T ss_pred CCCCEEEEEeC-------CEEEEEeCCCCccccccccCceEHhhhcCCCCCccCCCcccEEEEECCCCEEEEEEC-----
Confidence 36789999988 6788888 321 1132222110 1122222222 2689999988
Q ss_pred ccceEEEEeCCCCcEEe-----cC-CCCCC------CcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 203 YQASVERLDPRMGKWAP-----VP-SMSSR------RSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 203 ~~~~~~~yd~~~~~W~~-----~~-~~p~~------r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
+..|+||..+++-.. +. .+|.. ..--++.. .++++|++-| +..|+||..+.
T Consensus 138 --~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~~Ywr~d~~~~ 202 (227)
T 3lp9_A 138 --DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------DHYARVKVTPX 202 (227)
T ss_dssp --TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------TEEEEEECCSS
T ss_pred --CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEEC-------CEEEEEECCcc
Confidence 679999987654221 10 12311 11223333 3589999988 67899998776
No 202
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=87.25 E-value=22 Score=34.34 Aligned_cols=147 Identities=14% Similarity=0.071 Sum_probs=82.3
Q ss_pred CeEEEEeCCCC--cEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC---cEEecCCCCCCCcceEE
Q psy11771 158 SSMERYDPLTG--VWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG---KWAPVPSMSSRRSSCGV 232 (347)
Q Consensus 158 ~~~~~~d~~~~--~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~ 232 (347)
+.++.+|..+. .|..+..-...... .....++++|+....+. ....++.+|..+. .|+.+.+-..... +.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~-~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVS-LVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEE-EEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCE--EE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEE-EEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCEE--EE
Confidence 57899998665 57665433222222 24456889999875432 2467888998763 4877644332222 44
Q ss_pred EEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--C-CEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 233 AALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--E-GYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 233 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~-~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
...++.|++..-.++ ...++.+|........+. +|.... ...+.. + +.|++.... ...-..++.||..++
T Consensus 334 s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l~-~p~~~~-~~~~~~~~d~~~l~~~~ss--~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDA---TARVEQFDYEGKRVREVA-LPGLGS-VSGFNGKHDDPALYFGFEN--YAQPPTLYRFEPKSG 406 (693)
T ss_dssp EEETTEEEEEEEETT---EEEEEEECTTSCEEEEEC-CSSSSE-EEECCCCTTCSCEEEEEEC--SSSCCEEEEECTTTC
T ss_pred EEECCEEEEEEEECC---eeEEEEEECCCCeeEEee-cCCCce-EEeeecCCCCCEEEEEecC--CCCCCEEEEEECCCC
Confidence 445666665533221 247889998866555543 332211 111111 2 344443221 112357999999998
Q ss_pred cEEEccC
Q psy11771 310 KWQLLTP 316 (347)
Q Consensus 310 ~W~~~~~ 316 (347)
+++.+..
T Consensus 407 ~~~~l~~ 413 (693)
T 3iuj_A 407 AISLYRA 413 (693)
T ss_dssp CEEEEEC
T ss_pred eEEEEEe
Confidence 8887764
No 203
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=86.93 E-value=4.4 Score=38.85 Aligned_cols=144 Identities=14% Similarity=0.117 Sum_probs=76.4
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCC-cEE--eC----CCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTG-VWS--SC----PAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~--~~----~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 208 (347)
+++..++++|+|-| +.+|+++.... ... .+ +.+|.. ...+... .++++|+|-| +..|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------CEEE
Confidence 45667899999977 56777765442 111 11 223321 2222112 2678999977 6789
Q ss_pred EEeCCCC--cE-EecCC--CCCCCcceEEEE---ECCEEEEEcccCCCccCCeEEEEECCCCeEE-----EcCC-C-CCC
Q psy11771 209 RLDPRMG--KW-APVPS--MSSRRSSCGVAA---LDGAIYCVGGNDGTMCMSSGERFNVRRNSWE-----PIAP-M-LSR 273 (347)
Q Consensus 209 ~yd~~~~--~W-~~~~~--~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~-----~~~~-~-~~~ 273 (347)
+|+..+- -+ ..+.. +|.......+|. .++++|++-| +..|+||..+++=. .+.. . ..+
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~vd~gYPk~i~~~w~G~p 585 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKKMDPGFPKLIADAWNAIP 585 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTEECTTCCEETTTSCSSCC
T ss_pred EECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCcccccCCCCcchHhhcCCCC
Confidence 9985320 00 11111 222111122222 3689999987 68999998765321 1111 1 112
Q ss_pred CcceEEEEEC--CEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 274 RSTHEVVNIE--GYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 274 ~~~~~~~~~~--~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
...-++...+ +++|+|-| +..|.||..+.
T Consensus 586 ~~iDAAf~~~~~g~~YFFkG-------~~Ywr~d~~~~ 616 (631)
T 1ck7_A 586 DNLDAVVDLQGGGHSYFFKG-------AYYLKLENQSL 616 (631)
T ss_dssp TTCCEEECCTTSCBCEEEET-------TEEECCBTTBT
T ss_pred CCCcEeEEEcCCCeEEEEEC-------CEEEEEeCccc
Confidence 2223333433 79999988 35777776554
No 204
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=86.89 E-value=7.8 Score=33.15 Aligned_cols=142 Identities=14% Similarity=0.122 Sum_probs=69.9
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCc--EEeCCCCCCCccceEEE-------EECCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGV--WSSCPAMTTRRRYCRIA-------VVENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~--W~~~~~~~~~r~~~~~~-------~~~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
+.+++.|+.+ ..+.+||..+.+ ...+......- .++. ..++..++.|+.+ ..+..||..
T Consensus 80 ~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~s~~~~~l~~~~~d-----~~i~vwd~~ 147 (357)
T 3i2n_A 80 QRYLATGDFG-----GNLHIWNLEAPEMPVYSVKGHKEII--NAIDGIGGLGIGEGAPEIVTGSRD-----GTVKVWDPR 147 (357)
T ss_dssp TCCEEEEETT-----SCEEEECTTSCSSCSEEECCCSSCE--EEEEEESGGGCC-CCCEEEEEETT-----SCEEEECTT
T ss_pred CceEEEecCC-----CeEEEEeCCCCCccEEEEEecccce--EEEeeccccccCCCccEEEEEeCC-----CeEEEEeCC
Confidence 3666667654 357788877654 12222111111 1111 1245566666643 458888887
Q ss_pred CCc--EEecCCCCC--CCcceEEE-----EECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--
Q psy11771 214 MGK--WAPVPSMSS--RRSSCGVA-----ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-- 282 (347)
Q Consensus 214 ~~~--W~~~~~~p~--~r~~~~~~-----~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-- 282 (347)
+.. ...+..... .+...+++ .-++.+++.|+.+ ..+..||..+.+-........ ....++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~--~v~~~~~~~~ 220 (357)
T 3i2n_A 148 QKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDN-----GDIKLFDLRNMALRWETNIKN--GVCSLEFDRK 220 (357)
T ss_dssp SCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETT-----SEEEEEETTTTEEEEEEECSS--CEEEEEESCS
T ss_pred CCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccC-----CeEEEEECccCceeeecCCCC--ceEEEEcCCC
Confidence 754 333322121 12222222 1366777777654 478899998876433222111 11222222
Q ss_pred --CCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 283 --EGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 283 --~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++..++.|+.+ ..+.+||..+
T Consensus 221 ~~~~~~l~~~~~d-----g~i~i~d~~~ 243 (357)
T 3i2n_A 221 DISMNKLVATSLE-----GKFHVFDMRT 243 (357)
T ss_dssp SSSCCEEEEEEST-----TEEEEEEEEE
T ss_pred CCCCCEEEEECCC-----CeEEEEeCcC
Confidence 45666666643 2567777543
No 205
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.79 E-value=14 Score=31.70 Aligned_cols=153 Identities=13% Similarity=0.102 Sum_probs=75.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE--
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA-- 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-- 218 (347)
++..++.|+.+ ..+..||..+.+-...........-.+++.. ++.+++.|+.+ ..+..||..+.+-.
T Consensus 138 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d-----g~i~iwd~~~~~~~~~ 207 (343)
T 3lrv_A 138 NTEYFIWADNR-----GTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD-----GILDVYNLSSPDQASS 207 (343)
T ss_dssp -CCEEEEEETT-----CCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT-----SCEEEEESSCTTSCCE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCCCCcc
Confidence 45677777755 3588899887765332222222112233332 66777777744 56889999876532
Q ss_pred ecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeE-EEcCCCCC--CCcceEEEEE--CCEEEEEecc
Q psy11771 219 PVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSW-EPIAPMLS--RRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~~~--~~~~~~~~~~--~~~lyv~GG~ 292 (347)
.+.. .....-.+++.. ++...+.|+ + ..+..||..+.+- ..+..+.. ......++.+ +++.++.|+.
T Consensus 208 ~~~~-~h~~~v~~l~fs~~g~~l~s~~-~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 208 RFPV-DEEAKIKEVKFADNGYWMVVEC-D-----QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp ECCC-CTTSCEEEEEECTTSSEEEEEE-S-----SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred EEec-cCCCCEEEEEEeCCCCEEEEEe-C-----CeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 2211 011111222222 566666666 2 2688899876531 11111110 0011123444 5666666543
Q ss_pred CCCCCccEEEEEeCCCCcEEE
Q psy11771 293 DGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~W~~ 313 (347)
.+. .-.+|-|+...+.|+.
T Consensus 281 ~d~--~i~v~~~~~~~~~~~~ 299 (343)
T 3lrv_A 281 ESN--SLTIYKFDKKTKNWTK 299 (343)
T ss_dssp TTT--EEEEEEECTTTCSEEE
T ss_pred CCC--cEEEEEEcccccceEe
Confidence 121 1234444457778987
No 206
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.70 E-value=13 Score=31.01 Aligned_cols=146 Identities=10% Similarity=0.094 Sum_probs=69.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
++..++.|+.+ ..+..||....... +.....+.........++..++.|+.+ ..+..||..... ....
T Consensus 113 ~~~~l~~~~~d-----~~i~~~d~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~-~~~~ 180 (313)
T 3odt_A 113 QDGVVISGSWD-----KTAKVWKEGSLVYN-LQAHNASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKVI-KTFS 180 (313)
T ss_dssp ETTEEEEEETT-----SEEEEEETTEEEEE-EECCSSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEEE-EEEC
T ss_pred cCCEEEEEeCC-----CCEEEEcCCcEEEe-cccCCCceeEEEEccCCCCEEEEEECC-----CCEEEEecCceE-EEEe
Confidence 55666677654 35777882222221 111111111122222255556666543 457788843222 2222
Q ss_pred CCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCcc
Q psy11771 222 SMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLN 299 (347)
Q Consensus 222 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~ 299 (347)
.............-++. ++.|+.+ ..+..||..+.+-... +.........+.+ +++ ++.|+.+ .
T Consensus 181 ~~~~~~i~~~~~~~~~~-~~~~~~d-----g~i~i~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~-l~~~~~d-----g 246 (313)
T 3odt_A 181 GIHNDVVRHLAVVDDGH-FISCSND-----GLIKLVDMHTGDVLRT--YEGHESFVYCIKLLPNGD-IVSCGED-----R 246 (313)
T ss_dssp SSCSSCEEEEEEEETTE-EEEEETT-----SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSC-EEEEETT-----S
T ss_pred ccCcccEEEEEEcCCCe-EEEccCC-----CeEEEEECCchhhhhh--hhcCCceEEEEEEecCCC-EEEEecC-----C
Confidence 21222222222334667 5666654 4788999886643221 1111112223333 454 5556543 3
Q ss_pred EEEEEeCCCCcEEE
Q psy11771 300 SVEKYDPKLNKWQL 313 (347)
Q Consensus 300 ~v~~yd~~~~~W~~ 313 (347)
.+.+||..+.+...
T Consensus 247 ~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 247 TVRIWSKENGSLKQ 260 (313)
T ss_dssp EEEEECTTTCCEEE
T ss_pred EEEEEECCCCceeE
Confidence 68999988876543
No 207
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=86.54 E-value=6 Score=34.60 Aligned_cols=150 Identities=10% Similarity=-0.032 Sum_probs=72.2
Q ss_pred CCeEEEEeCCCCcEEeCCCCCCCccceEEE-EECCE-EEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCC------Cc
Q psy11771 157 LSSMERYDPLTGVWSSCPAMTTRRRYCRIA-VVENC-LYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSR------RS 228 (347)
Q Consensus 157 ~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~-~~~~~-lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~------r~ 228 (347)
...++.+|..+...+.+............+ .-+++ |+..+... ......++.+|+.+.+-+.+..++.. ..
T Consensus 215 ~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~ 293 (388)
T 3pe7_A 215 DARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLMSNYD 293 (388)
T ss_dssp SCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTT
T ss_pred cceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeeeecCC
Confidence 457999998887766665433211111112 22444 54433221 11123599999998876665443320 00
Q ss_pred ceEEEEECCEEEEEc----ccCCCccCCeEEEEECCCCeEEEcCCCCCC----------CcceEEEEECCE-EEEEeccC
Q psy11771 229 SCGVAALDGAIYCVG----GNDGTMCMSSGERFNVRRNSWEPIAPMLSR----------RSTHEVVNIEGY-LLTMGGND 293 (347)
Q Consensus 229 ~~~~~~~~~~iyv~G----G~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----------~~~~~~~~~~~~-lyv~GG~~ 293 (347)
......-+..|++.. |+.. .....++.+|+.+++-..+...+.. .....+..-+++ |+......
T Consensus 294 ~~~~spdg~~l~~~~~~~~~~~~-~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~ 372 (388)
T 3pe7_A 294 GSLMVGDGSDAPVDVQDDSGYKI-ENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH 372 (388)
T ss_dssp SSEEEEEECCC-------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT
T ss_pred CCeEccCCCcceeEeeecccccc-CCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC
Confidence 011111223333321 1110 1135799999999887766533221 111112222554 44443332
Q ss_pred CCCCccEEEEEeCCCCcE
Q psy11771 294 GSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~W 311 (347)
+ ...++.+|..+..|
T Consensus 373 g---~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 373 G---KPALYLATLPESVW 387 (388)
T ss_dssp S---SCEEEEEECCGGGG
T ss_pred C---ceeEEEEECChhcc
Confidence 2 35799999887766
No 208
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=86.50 E-value=7.4 Score=37.74 Aligned_cols=68 Identities=7% Similarity=-0.120 Sum_probs=37.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCC---cEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTG---VWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~---~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
+++.+++++. ..++++|..++ ...++...... .......-+++..+++. ...++.+|..+++..
T Consensus 119 Dg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~~~~-~~~~~~SPDG~~la~~~------~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 119 DAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHGEGF-ATDAKLSPKGGFVSFIR------GRNLWVIDLASGRQM 185 (741)
T ss_dssp TSSEEEEEET------TEEEEEESSSCSTTSCCBCCCSSSC-EEEEEECTTSSEEEEEE------TTEEEEEETTTTEEE
T ss_pred CCCEEEEEeC------CcEEEEECCCCCcceEEEcccCCcc-cccccCCCCCCEEEEEe------CCcEEEEecCCCCEE
Confidence 4555555442 67899998887 54444332211 11111222555444433 147999999888777
Q ss_pred ecCC
Q psy11771 219 PVPS 222 (347)
Q Consensus 219 ~~~~ 222 (347)
.+..
T Consensus 186 ~~~~ 189 (741)
T 2ecf_A 186 QLTA 189 (741)
T ss_dssp ECCC
T ss_pred Eecc
Confidence 6654
No 209
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=86.44 E-value=15 Score=31.43 Aligned_cols=142 Identities=7% Similarity=-0.014 Sum_probs=72.6
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
+.+++.|+.+ ..+.+||..+........+....... +++.. +++.++.|+.+ ..+..||..+.+....
T Consensus 54 g~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-----g~v~iwd~~~~~~~~~ 123 (368)
T 3mmy_A 54 GNFLIAGSWA-----NDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD-----KTAKMWDLSSNQAIQI 123 (368)
T ss_dssp SEEEEEEETT-----SEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC-----CcEEEEEcCCCCceee
Confidence 4788888865 35778887763222111111111111 22222 55555666543 5688999988876554
Q ss_pred CCCCCCCcceEEEE---ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCC
Q psy11771 221 PSMSSRRSSCGVAA---LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSS 297 (347)
Q Consensus 221 ~~~p~~r~~~~~~~---~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~ 297 (347)
.....+ -.++.. -++.+++.|+.+ ..+..||..+.+-.. .+.............+.+++.++.
T Consensus 124 ~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----- 189 (368)
T 3mmy_A 124 AQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPMM--VLQLPERCYCADVIYPMAVVATAE----- 189 (368)
T ss_dssp EECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCSE--EEECSSCEEEEEEETTEEEEEEGG-----
T ss_pred ccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEEE--EEecCCCceEEEecCCeeEEEeCC-----
Confidence 332222 222222 356777777764 468889887654211 111122222333445555554432
Q ss_pred ccEEEEEeCCCC
Q psy11771 298 LNSVEKYDPKLN 309 (347)
Q Consensus 298 ~~~v~~yd~~~~ 309 (347)
..+.+||....
T Consensus 190 -~~i~~~~~~~~ 200 (368)
T 3mmy_A 190 -RGLIVYQLENQ 200 (368)
T ss_dssp -GCEEEEECSSS
T ss_pred -CcEEEEEeccc
Confidence 35778887654
No 210
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=86.39 E-value=14 Score=32.34 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=70.5
Q ss_pred CeEEEEeCCCCcEEeC--CCCCCCc-cc-eEEEE--ECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCCCcc
Q psy11771 158 SSMERYDPLTGVWSSC--PAMTTRR-RY-CRIAV--VENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSRRSS 229 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~--~~~~~~r-~~-~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~ 229 (347)
..+..||..+.+-... ...+... .. .+++. .++.+++.|+.+ ..+..||.... .-..+..-... -
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~~~~~~~~~h~~~--v 252 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITSRAVRTYHGHEGD--I 252 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTCCCCEEECCCSSC--C
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCCcceEEECCcCCC--e
Confidence 4578888887764321 1222111 11 12222 256777878754 45788887632 11122111111 1
Q ss_pred eEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCC-----CCcceEEEEE--CCEEEEEeccCCCCCccEE
Q psy11771 230 CGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLS-----RRSTHEVVNI--EGYLLTMGGNDGSSSLNSV 301 (347)
Q Consensus 230 ~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~-----~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v 301 (347)
.+++. -++..++.|+.+ ..+..||..+.+-...-.... .......+.+ ++++++.|+.++ .+
T Consensus 253 ~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg-----~i 322 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG-----DC 322 (380)
T ss_dssp CEEEECTTSSEEEEECSS-----SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS-----CE
T ss_pred EEEEEecCCCeEEEEcCC-----CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC-----CE
Confidence 22222 256777777765 468889988775433211111 1111223333 677777776543 58
Q ss_pred EEEeCCCCcEE
Q psy11771 302 EKYDPKLNKWQ 312 (347)
Q Consensus 302 ~~yd~~~~~W~ 312 (347)
.+||..+.+-.
T Consensus 323 ~vwd~~~~~~~ 333 (380)
T 3iz6_a 323 YVWDTLLAEMV 333 (380)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCceE
Confidence 89998776543
No 211
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=86.39 E-value=13 Score=30.99 Aligned_cols=82 Identities=20% Similarity=0.182 Sum_probs=43.6
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL 235 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 235 (347)
+.+.++|..+++..+.-.+....... +++.. +++..+.|+.+ ..+..||..+.+-...-..... .......
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D-----g~v~iw~~~~~~~~~~~~~h~~--~~~~~~~ 117 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNMTSHSA--RVGSLSW 117 (318)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSS--CEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC-----CcEEEeecCCceeEEEecCccc--eEEEeec
Confidence 56888999888765433332222222 22222 56667777744 5688899887754332211122 2233444
Q ss_pred CCEEEEEcccC
Q psy11771 236 DGAIYCVGGND 246 (347)
Q Consensus 236 ~~~iyv~GG~~ 246 (347)
++.+.+.|+..
T Consensus 118 ~~~~l~s~~~~ 128 (318)
T 4ggc_A 118 NSYILSSGSRS 128 (318)
T ss_dssp ETTEEEEEETT
T ss_pred CCCEEEEEecC
Confidence 55566666543
No 212
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=85.99 E-value=26 Score=33.82 Aligned_cols=104 Identities=15% Similarity=0.082 Sum_probs=59.4
Q ss_pred cceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe---EEEcCCCCCCCcceEEE
Q psy11771 204 QASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS---WEPIAPMLSRRSTHEVV 280 (347)
Q Consensus 204 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~~~~~~~~~~~ 280 (347)
...++.+|..+..|..+..-.... ...+..++.+|+....+ .....++.+|..+.. |+.+.+-..........
T Consensus 251 ~~~l~~~~~~~~~~~~l~~~~~~~--~~~~~~~g~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~ 326 (695)
T 2bkl_A 251 ENDVYWKRPGEKDFRLLVKGVGAK--YEVHAWKDRFYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLLSVS 326 (695)
T ss_dssp EEEEEEECTTCSSCEEEEECSSCC--EEEEEETTEEEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEE
T ss_pred ceEEEEEcCCCCceEEeecCCCce--EEEEecCCcEEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEE
Confidence 457888887777787775433222 22223566666654332 223689999987654 87765432122222333
Q ss_pred EECCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 281 NIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 281 ~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
..+++|++....++ ...++.+|+....-+.+
T Consensus 327 ~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 327 IVGGHLSLEYLKDA---TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EETTEEEEEEEETT---EEEEEEEETTCCEEEEC
T ss_pred EECCEEEEEEEECC---EEEEEEEeCCCCeeEEe
Confidence 44888888775443 34688888755444433
No 213
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=85.78 E-value=7.7 Score=36.48 Aligned_cols=104 Identities=9% Similarity=-0.048 Sum_probs=57.1
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeC--CCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDP--RMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~--~~~~ 216 (347)
.++.+|+.+..+ ..+.++|..+.+.... ++.....+.++.. +..+|+.+. ...+..||+ .+.+
T Consensus 147 p~~~~~vs~~~d-----~~V~v~D~~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~------d~~V~v~D~~~~t~~ 213 (543)
T 1nir_A 147 LPNLFSVTLRDA-----GQIALVDGDSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR------DARIDMIDLWAKEPT 213 (543)
T ss_dssp GGGEEEEEEGGG-----TEEEEEETTTCCEEEE--EECSTTEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCE
T ss_pred CCCEEEEEEcCC-----CeEEEEECCCceEEEE--EecCcccceEEECCCCCEEEEECC------CCeEEEEECcCCCCc
Confidence 367888886643 5688899988764321 1211123444333 346777653 167999999 5544
Q ss_pred EEecCCCCCCCcceEEEEE-----CC-EEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 217 WAPVPSMSSRRSSCGVAAL-----DG-AIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
- +..++....-..++.. ++ .+|+.+... ..+.++|..+.+-
T Consensus 214 ~--~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~-----~~v~v~D~~t~~~ 260 (543)
T 1nir_A 214 K--VAEIKIGIEARSVESSKFKGYEDRYTIAGAYWP-----PQFAIMDGETLEP 260 (543)
T ss_dssp E--EEEEECCSEEEEEEECCSTTCTTTEEEEEEEES-----SEEEEEETTTCCE
T ss_pred E--EEEEecCCCcceEEeCCCcCCCCCEEEEEEccC-----CeEEEEecccccc
Confidence 2 3333333333334433 45 455543222 5678889877653
No 214
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=85.75 E-value=15 Score=30.97 Aligned_cols=146 Identities=12% Similarity=0.116 Sum_probs=71.6
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCcc-ceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc--
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRR-YCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK-- 216 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-- 216 (347)
++.+++.|+.+ ..+.++|..++. .....+..... -.+++.. ++.+++.|+.+ ..+..||..+..
T Consensus 108 ~~~~l~sgs~D-----~~v~lWd~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D-----~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 108 TKPYVLSGSDD-----LTVKLWNWENNW-ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLD-----RTVKVWSLGQSTPN 176 (304)
T ss_dssp SSSEEEEEETT-----SCEEEEEGGGTT-EEEEEECCCCSCEEEEEECTTCTTEEEEEETT-----SEEEEEETTCSSCS
T ss_pred CCCEEEEECCC-----CeEEEEECCCCc-chhhhhcccCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEECCCCCcc
Confidence 45666677755 357778876542 11111111111 1222222 34566777644 467888876432
Q ss_pred EEecCCCCCCCcceEEEEE---CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEec
Q psy11771 217 WAPVPSMSSRRSSCGVAAL---DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGG 291 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG 291 (347)
...... ..+....+... ++.+.+.|+.+ ..+..||..+.+-.. .+.........+.+ ++.+++.|+
T Consensus 177 ~~~~~~--~~~~v~~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~--~~~~h~~~v~~~~~~p~~~~l~s~s 247 (304)
T 2ynn_A 177 FTLTTG--QERGVNYVDYYPLPDKPYMITASDD-----LTIKIWDYQTKSCVA--TLEGHMSNVSFAVFHPTLPIIISGS 247 (304)
T ss_dssp EEEECC--CTTCEEEEEECCSTTCCEEEEEETT-----SEEEEEETTTTEEEE--EEECCSSCEEEEEECSSSSEEEEEE
T ss_pred ceeccC--CcCcEEEEEEEEcCCCCEEEEEcCC-----CeEEEEeCCCCccce--eeCCCCCCEEEEEECCCCCEEEEEc
Confidence 111111 11111112211 44566666654 578889988765322 11111122223333 556777777
Q ss_pred cCCCCCccEEEEEeCCCCcEE
Q psy11771 292 NDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W~ 312 (347)
.++ .+.+||..+.+-.
T Consensus 248 ~Dg-----~i~iWd~~~~~~~ 263 (304)
T 2ynn_A 248 EDG-----TLKIWNSSTYKVE 263 (304)
T ss_dssp TTS-----CEEEEETTTCCEE
T ss_pred CCC-----eEEEEECCCCcee
Confidence 643 5889998876543
No 215
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=85.74 E-value=3.3 Score=35.55 Aligned_cols=68 Identities=6% Similarity=-0.019 Sum_probs=41.0
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
++++|+.++.+ ..++.+|+.+.+....-+.+.......++. -++ .+|+.+..+ ..++.||+.+.+-..
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~-----~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHY-----GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCC-----CcEEEEeCCCCcEEE
Confidence 66788877643 678999998876543322222101223333 244 578776432 579999998876543
No 216
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=85.68 E-value=13 Score=30.25 Aligned_cols=99 Identities=14% Similarity=0.133 Sum_probs=58.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc--E-EeCCC--CCCCccceEEEE---ECCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV--W-SSCPA--MTTRRRYCRIAV---VENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~--~~~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++++|+|-| +.+|+||..+.. + +.+.. +|..-....+|. .++++|++-| +..++||..
T Consensus 87 ~~k~yfFkG-------~~yW~y~~~~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~ 152 (218)
T 1gen_A 87 EEKAVFFAG-------NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEV 152 (218)
T ss_dssp TTEEEEEET-------TEEEEEETTEECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETT
T ss_pred CCEEEEEeC-------CEEEEEcCccccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECc
Confidence 689999988 678999852110 0 11111 221111122233 3689999987 678999987
Q ss_pred CCcEEec---------CCCCCCCcceEEEEEC--CEEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 214 MGKWAPV---------PSMSSRRSSCGVAALD--GAIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 214 ~~~W~~~---------~~~p~~r~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
+++-..- +.+|. .-.++...+ +.+|++-| +..++||..+..
T Consensus 153 ~~~v~~gyPr~i~~~w~g~p~--~idaAf~~~~~g~~YfFkg-------~~y~~~~~~~~~ 204 (218)
T 1gen_A 153 KKKMDPGFPKLIADAWNAIPD--NLDAVVDLQGGGHSYFFKG-------AYYLKLENQSLK 204 (218)
T ss_dssp TTEECSSCCEEHHHHSSSCCS--SCSEEEECTTTCEEEEEET-------TEEEEEETTEEE
T ss_pred cccccCCCCcchhhccCCCCC--CCCEEEEEcCCCcEEEEEC-------CEEEEEECCcee
Confidence 7643211 12222 223444444 89999977 578889886654
No 217
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=85.61 E-value=16 Score=30.98 Aligned_cols=135 Identities=15% Similarity=0.202 Sum_probs=69.7
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCC-CCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCC-cE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPL-TGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMG-KW 217 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~-~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W 217 (347)
.++.||+... ...+++||+. ...|......+ . ..+.+.. ++.+|+... ...+++||+... .|
T Consensus 106 ~~~~l~v~t~------~~~l~~~d~~g~~~~~~~~~~~--~-~~~~~~~~~g~l~vgt~------~~~l~~~d~~g~~~~ 170 (330)
T 3hxj_A 106 FEDILYVTSM------DGHLYAINTDGTEKWRFKTKKA--I-YATPIVSEDGTIYVGSN------DNYLYAINPDGTEKW 170 (330)
T ss_dssp ETTEEEEECT------TSEEEEECTTSCEEEEEECSSC--C-CSCCEECTTSCEEEECT------TSEEEEECTTSCEEE
T ss_pred ECCEEEEEec------CCEEEEEcCCCCEEEEEcCCCc--e-eeeeEEcCCCEEEEEcC------CCEEEEECCCCCEeE
Confidence 3888887532 1458889987 33465432211 1 1122333 677777432 256889998722 36
Q ss_pred EecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCC-CeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCC
Q psy11771 218 APVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRR-NSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDG 294 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~ 294 (347)
....+ ... ..+.+. -++.||+.. ..+++||... ..|+...... ...+.+.. ++.||+...
T Consensus 171 ~~~~~--~~~-~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~~~~~---~~~~~~~~~~g~l~v~t~--- 233 (330)
T 3hxj_A 171 RFKTN--DAI-TSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFYAGYW---TVTRPAISEDGTIYVTSL--- 233 (330)
T ss_dssp EEECS--SCC-CSCCEECTTCCEEEES--------SSEEEECTTSCEEEEECCSSC---CCSCCEECTTSCEEEEET---
T ss_pred EEecC--CCc-eeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEccCCc---ceeceEECCCCeEEEEcC---
Confidence 55322 111 122333 367788754 4688888542 3566543221 11222333 457777432
Q ss_pred CCCccEEEEEeCCCCc
Q psy11771 295 SSSLNSVEKYDPKLNK 310 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~ 310 (347)
...+.+||+....
T Consensus 234 ---~~gl~~~~~~g~~ 246 (330)
T 3hxj_A 234 ---DGHLYAINPDGTE 246 (330)
T ss_dssp ---TTEEEEECTTSCE
T ss_pred ---CCeEEEECCCCCE
Confidence 1257777764443
No 218
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=85.10 E-value=16 Score=30.60 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=74.8
Q ss_pred ECCEEEEE----cccC--------CCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceE
Q psy11771 141 FDGLLYAC----GGYD--------GASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASV 207 (347)
Q Consensus 141 ~~~~lyv~----GG~~--------~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 207 (347)
.++++|+. |... .......++++|+. ++...+.... ....+++.. ++++++.+.. ...+
T Consensus 124 ~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~--~~~~gi~~s~dg~~lv~~~~-----~~~i 195 (296)
T 3e5z_A 124 PDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDR--VKPNGLAFLPSGNLLVSDTG-----DNAT 195 (296)
T ss_dssp TTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCC--SSEEEEEECTTSCEEEEETT-----TTEE
T ss_pred CCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCC--CCCccEEECCCCCEEEEeCC-----CCeE
Confidence 46788886 4321 01113479999987 5544332111 111233332 4555554432 2578
Q ss_pred EEEeCC-CCcE-E--ecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE
Q psy11771 208 ERLDPR-MGKW-A--PVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI 282 (347)
Q Consensus 208 ~~yd~~-~~~W-~--~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 282 (347)
++||.. +.+. . ..-....... .+++. -+|.||+..+ ..+.+||+.......+. .+.. ...+.+
T Consensus 196 ~~~~~~~~g~~~~~~~~~~~~~~~p-~~i~~d~~G~l~v~~~-------~~v~~~~~~g~~~~~~~-~~~~---~~~~~f 263 (296)
T 3e5z_A 196 HRYCLNARGETEYQGVHFTVEPGKT-DGLRVDAGGLIWASAG-------DGVHVLTPDGDELGRVL-TPQT---TSNLCF 263 (296)
T ss_dssp EEEEECSSSCEEEEEEEECCSSSCC-CSEEEBTTSCEEEEET-------TEEEEECTTSCEEEEEE-CSSC---CCEEEE
T ss_pred EEEEECCCCcCcCCCeEeeCCCCCC-CeEEECCCCCEEEEcC-------CeEEEECCCCCEEEEEE-CCCC---ceeEEE
Confidence 888876 4444 1 1111111111 12233 3688998762 57999999865544443 2222 223333
Q ss_pred ---C-CEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 283 ---E-GYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 283 ---~-~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
+ +.||+... +.+++|++++++-
T Consensus 264 ~~~d~~~L~v~t~-------~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 264 GGPEGRTLYMTVS-------TEFWSIETNVRGL 289 (296)
T ss_dssp ESTTSCEEEEEET-------TEEEEEECSCCBC
T ss_pred ECCCCCEEEEEcC-------CeEEEEEcccccc
Confidence 2 36777653 3699999988743
No 219
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=84.99 E-value=15 Score=30.31 Aligned_cols=148 Identities=11% Similarity=-0.037 Sum_probs=82.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.||+.-.. .+.+.++++....-+.+..... .....++.. +++||+..... ....++++++....-+.
T Consensus 90 ~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~ 160 (267)
T 1npe_A 90 GRTIFWTDSQ-----LDRIEVAKMDGTQRRVLFDTGL-VNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRI 160 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEE
T ss_pred CCeEEEEECC-----CCEEEEEEcCCCCEEEEEECCC-CCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEE
Confidence 6799988542 2578889887544333221111 122334443 68999985321 13578888876543333
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEc-CCCCCCCcceEEEEECCEEEEEeccCCCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI-APMLSRRSTHEVVNIEGYLLTMGGNDGSS 296 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~lyv~GG~~~~~ 296 (347)
+..... ..-.+++.- ++.||+.-.. .+.++++|+....-..+ ..+..| .+++.-++.||+....
T Consensus 161 ~~~~~~-~~P~gia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~~~~~~~~P---~gi~~d~~~lyva~~~---- 227 (267)
T 1npe_A 161 LAQDNL-GLPNGLTFDAFSSQLCWVDAG-----THRAECLNPAQPGRRKVLEGLQYP---FAVTSYGKNLYYTDWK---- 227 (267)
T ss_dssp EECTTC-SCEEEEEEETTTTEEEEEETT-----TTEEEEEETTEEEEEEEEECCCSE---EEEEEETTEEEEEETT----
T ss_pred EEECCC-CCCcEEEEcCCCCEEEEEECC-----CCEEEEEecCCCceEEEecCCCCc---eEEEEeCCEEEEEECC----
Confidence 321111 122333432 5789998543 26899999975432222 222222 3455568999997542
Q ss_pred CccEEEEEeCCCCcEE
Q psy11771 297 SLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 297 ~~~~v~~yd~~~~~W~ 312 (347)
.+.+.++|+.+.+-.
T Consensus 228 -~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 228 -TNSVIAMDLAISKEM 242 (267)
T ss_dssp -TTEEEEEETTTTEEE
T ss_pred -CCeEEEEeCCCCCce
Confidence 247999999877543
No 220
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=84.88 E-value=29 Score=33.49 Aligned_cols=150 Identities=9% Similarity=0.023 Sum_probs=79.4
Q ss_pred CeEEEEeCCCCcEE--eCCCCC-CCccceEEEE-ECCE-EEEEcCcCCCCccceEEEEeCCC------C--cEEecCCCC
Q psy11771 158 SSMERYDPLTGVWS--SCPAMT-TRRRYCRIAV-VENC-LYALGGFDSTNYQASVERLDPRM------G--KWAPVPSMS 224 (347)
Q Consensus 158 ~~~~~~d~~~~~W~--~~~~~~-~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~~~------~--~W~~~~~~p 224 (347)
..+++++..+...+ .+...+ .+....+... -+++ |++... ......+.++.+|..+ . .+..+..-.
T Consensus 208 ~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~-~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~ 286 (710)
T 2xdw_A 208 QKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR-EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNF 286 (710)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE-CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSS
T ss_pred CEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE-ccCCCccEEEEEECcccccccCCccceEEeeCCC
Confidence 34777777765521 111111 1222222222 2444 444332 2221247899999876 3 577765433
Q ss_pred CCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC---eEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCCCCccE
Q psy11771 225 SRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN---SWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGSSSLNS 300 (347)
Q Consensus 225 ~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~~~~~ 300 (347)
... ......-++.||+.+..+. ....++.+|..+. .|+.+.+-........+... ++.|++....++ ...
T Consensus 287 ~~~-~~~~s~dg~~l~~~s~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g---~~~ 360 (710)
T 2xdw_A 287 EGE-YDYVTNEGTVFTFKTNRHS--PNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV---KNT 360 (710)
T ss_dssp SSC-EEEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT---EEE
T ss_pred CcE-EEEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC---EEE
Confidence 222 2223334678888865432 2368999998875 48877543222222234445 678877765433 346
Q ss_pred EEEEeCCCCc-EEEc
Q psy11771 301 VEKYDPKLNK-WQLL 314 (347)
Q Consensus 301 v~~yd~~~~~-W~~~ 314 (347)
++.+|+.+++ ...+
T Consensus 361 l~~~~~~~g~~~~~l 375 (710)
T 2xdw_A 361 LQLHDLATGALLKIF 375 (710)
T ss_dssp EEEEETTTCCEEEEE
T ss_pred EEEEECCCCCEEEec
Confidence 8999985554 4444
No 221
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=84.63 E-value=17 Score=34.04 Aligned_cols=115 Identities=6% Similarity=-0.040 Sum_probs=59.4
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCE-EEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGA-IYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
+..+|+.... ...+..+|..+.+-..+..++..+.-+.++. -+++ +|+.+..+ +++.++|..+++-..
T Consensus 291 ~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~-----~~v~v~D~~tg~l~~ 360 (543)
T 1nir_A 291 HPEFIVNVKE-----TGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNS-----NKVAVIDSKDRRLSA 360 (543)
T ss_dssp SSEEEEEETT-----TTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEE
T ss_pred CCEEEEEECC-----CCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCC-----CeEEEEECCCCeEEE
Confidence 3455555432 3678888877643111111122222223332 2454 55554322 578889999886543
Q ss_pred c---CCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCC-----cEEEccCCC
Q psy11771 267 I---APMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLN-----KWQLLTPML 318 (347)
Q Consensus 267 ~---~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~-----~W~~~~~~~ 318 (347)
. ...|.+..+... .. ++.+|+.+...+ +.|.++|..+. .|+.+..++
T Consensus 361 ~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d----~~V~v~d~~~~~~~~~~~~~v~~l~ 417 (543)
T 1nir_A 361 LVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGD----GSISLIGTDPKNHPQYAWKKVAELQ 417 (543)
T ss_dssp EEECSSSBCCTTCEEE-EETTTEEEEEEEBSSS----SEEEEEECCTTTCTTTBTSEEEEEE
T ss_pred eeccCCCCCCCCCccc-CCCCCccEEEeccCCC----ceEEEEEeCCCCCchhcCeEEEEEE
Confidence 2 233433233222 23 377888764322 36888887762 377766544
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=84.26 E-value=8.6 Score=32.67 Aligned_cols=151 Identities=13% Similarity=0.029 Sum_probs=76.1
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVP 221 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~ 221 (347)
+.||+.+-.+ ..+++|++ +...+.... +.. ...+++.. ++++|+.... ...+.+||+. .+.+.+.
T Consensus 57 ~~l~~~d~~~-----~~i~~~~~-~g~~~~~~~-~~~-~~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~-g~~~~~~ 122 (305)
T 3dr2_A 57 RTLVWSDLVG-----RRVLGWRE-DGTVDVLLD-ATA-FTNGNAVDAQQRLVHCEHG-----RRAITRSDAD-GQAHLLV 122 (305)
T ss_dssp TEEEEEETTT-----TEEEEEET-TSCEEEEEE-SCS-CEEEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEE
T ss_pred CEEEEEECCC-----CEEEEEeC-CCCEEEEeC-CCC-ccceeeECCCCCEEEEECC-----CCEEEEECCC-CCEEEEE
Confidence 4577775432 46888888 444333221 111 11222222 6788876421 2468889886 5565543
Q ss_pred CCCCCC---cceEEEE-ECCEEEEE----cccCC--------CccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC
Q psy11771 222 SMSSRR---SSCGVAA-LDGAIYCV----GGNDG--------TMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG 284 (347)
Q Consensus 222 ~~p~~r---~~~~~~~-~~~~iyv~----GG~~~--------~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~ 284 (347)
...... .-..++. -+|.||+. |-... ......+++||+.+++++.+. ... .-.+.+.. ++
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-~p~gl~~spdg 199 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-HPNGLAFSPDE 199 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-SEEEEEECTTS
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-CCcceEEcCCC
Confidence 211111 1112222 37889986 32210 111357999999888776654 111 11233333 44
Q ss_pred -EEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 285 -YLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 285 -~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.||+..........+.+++||...+.
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA 226 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC
Confidence 58876542211112578899877654
No 223
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=84.02 E-value=16 Score=35.36 Aligned_cols=116 Identities=7% Similarity=-0.162 Sum_probs=61.1
Q ss_pred ECCEEEEEccc-CCCCCCCeEEEEeCCCCcEEeCCCCCCCc------------------------cceEEEEECCEEEEE
Q psy11771 141 FDGLLYACGGY-DGASCLSSMERYDPLTGVWSSCPAMTTRR------------------------RYCRIAVVENCLYAL 195 (347)
Q Consensus 141 ~~~~lyv~GG~-~~~~~~~~~~~~d~~~~~W~~~~~~~~~r------------------------~~~~~~~~~~~lyv~ 195 (347)
.+++.+++++. ++......++.+|..+.+...+....... ...-...-+++..++
T Consensus 46 pdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~ 125 (741)
T 2ecf_A 46 PDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLF 125 (741)
T ss_dssp TTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEE
T ss_pred cCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEE
Confidence 35665566554 44333347999999988776543221100 011112225544444
Q ss_pred cCcCCCCccceEEEEeCCCC---cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCC
Q psy11771 196 GGFDSTNYQASVERLDPRMG---KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAP 269 (347)
Q Consensus 196 GG~~~~~~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 269 (347)
++. ..++.+|..+. .-..+..... ........-+|+..+++.. ..++.+|..+++...+..
T Consensus 126 ~~~------~~i~~~d~~~~~~~~~~~l~~~~~-~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 126 PLG------GELYLYDLKQEGKAAVRQLTHGEG-FATDAKLSPKGGFVSFIRG------RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EET------TEEEEEESSSCSTTSCCBCCCSSS-CEEEEEECTTSSEEEEEET------TEEEEEETTTTEEEECCC
T ss_pred EeC------CcEEEEECCCCCcceEEEcccCCc-ccccccCCCCCCEEEEEeC------CcEEEEecCCCCEEEecc
Confidence 432 67999999876 4433332211 1111122225554444332 379999999888777654
No 224
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=83.43 E-value=10 Score=32.51 Aligned_cols=144 Identities=13% Similarity=-0.007 Sum_probs=73.2
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CC-EEEEEcCcC-----------------CC----CccceEEEEeCCC
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-EN-CLYALGGFD-----------------ST----NYQASVERLDPRM 214 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~-~lyv~GG~~-----------------~~----~~~~~~~~yd~~~ 214 (347)
..++.+|..+++..++...+. ....+.. ++ .|++..... +. .....++.+|+.+
T Consensus 85 ~~l~~~~~~~g~~~~l~~~~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 85 SEIWVADLETLSSKKILEAKN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEEEETTTTEEEEEEEESE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred ceEEEEECCCCceEEEEcCCC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 458889988877665543332 1122222 44 454443210 00 1135688999988
Q ss_pred CcE-EecCCCCCCCcceEEEEECCEEEEEcccCCCc---c-CCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEE
Q psy11771 215 GKW-APVPSMSSRRSSCGVAALDGAIYCVGGNDGTM---C-MSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTM 289 (347)
Q Consensus 215 ~~W-~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~---~-~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~ 289 (347)
++. ..+.. + ........-++ +++.+...... . ...++.+| +.++..+..- .......-+++.+++
T Consensus 162 ~~~~~~l~~-~--~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~~~~~~spdg~~l~~ 231 (347)
T 2gop_A 162 EEVIEEFEK-P--RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----VSFYAVDSDGERILL 231 (347)
T ss_dssp TEEEEEEEE-E--TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----ESEEEEEECSSCEEE
T ss_pred CeEEeeecC-C--CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----cceeeECCCCCEEEE
Confidence 877 55554 3 22222223345 55555433211 1 35788888 6677766432 112222446654444
Q ss_pred eccCC---CCCccEEEEEeCCCCcEEEccC
Q psy11771 290 GGNDG---SSSLNSVEKYDPKLNKWQLLTP 316 (347)
Q Consensus 290 GG~~~---~~~~~~v~~yd~~~~~W~~~~~ 316 (347)
.+... ......++.+| +.++..+..
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESST
T ss_pred EEccccCCccccceEEEEC--CCceEeccc
Confidence 43221 11245799999 666766543
No 225
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=83.36 E-value=13 Score=31.54 Aligned_cols=108 Identities=8% Similarity=-0.065 Sum_probs=59.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeE--
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSW-- 264 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W-- 264 (347)
++.+|+.++.+ ..+..||+.+.+....-..+.. ...++. -++ .+|+.+..+ ..++.||+.+.+.
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~-----~~i~~~d~~~~~~~~ 76 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITLGYD--FVDTAITSDCSNVVVTSDFC-----QTLVQIETQLEPPKV 76 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEECCCC--EEEEEECSSSCEEEEEESTT-----CEEEEEECSSSSCEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEccCC--cceEEEcCCCCEEEEEeCCC-----CeEEEEECCCCceeE
Confidence 56788876533 6799999998887654333321 223332 244 577776533 4899999988763
Q ss_pred EEcCCCCCCCcceEEEEE-CC-EEEEEeccCCCCCccEEEEEeCCCCcEEE
Q psy11771 265 EPIAPMLSRRSTHEVVNI-EG-YLLTMGGNDGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 313 (347)
..+..-..+. ++++.. ++ .|| .+...+ ....+.+||+.+.+-..
T Consensus 77 ~~~~~~~~~~--~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~ 122 (331)
T 3u4y_A 77 VAIQEGQSSM--ADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFIS 122 (331)
T ss_dssp EEEEECSSCC--CCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEE
T ss_pred EecccCCCCc--cceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEE
Confidence 2222211111 112222 33 466 332211 11379999998876543
No 226
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=83.31 E-value=5.7 Score=36.47 Aligned_cols=102 Identities=10% Similarity=0.058 Sum_probs=57.5
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEe--c----CCCCCCCcceEEEE--ECCEEEEEcccCCCccCCeEE
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAP--V----PSMSSRRSSCGVAA--LDGAIYCVGGNDGTMCMSSGE 255 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~--~----~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~ 255 (347)
+++..++++|+|-| ...|+++.....+.. + +.+|.... ++.. .++++|++-| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~Wp~LP~~iD--Aa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKD-------RFYMRTNPFYPEVELNFISVFWPQLPNGLE--AAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEET-------TEEEECCTTSSSCEEEEGGGTCTTSCSSCC--EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeC-------CEEEEEcCCCCcccceehhHhccCCCCCee--EEEEEcCCCeEEEEeC-------CEEE
Confidence 45668999999987 456666654433321 1 23443321 2223 3799999977 5778
Q ss_pred EEECCCCe--E-EEcC---CCCC--CCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 256 RFNVRRNS--W-EPIA---PMLS--RRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 256 ~yd~~~~~--W-~~~~---~~~~--~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
+|+..+-. + ..+. .+|. .... ++... ++++|+|-| +..|.||..++
T Consensus 331 ~~~~~~~~~gyP~~i~~~~g~P~~~~~ID-AA~~~~~~~k~yfFkG-------~~yw~yd~~~~ 386 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSFGFPRTVKHID-AALSEENTGKTYFFVA-------NKYWRYDEYKR 386 (450)
T ss_dssp EEETTEECTTCSEEHHHHHCCCTTCCCCC-EEEEETTTTEEEEEET-------TEEEEEETTTT
T ss_pred EecCCcccCCCceeeehhhcCCCCCCccc-eEEEEcCCCeEEEEeC-------CEEEEEeCCCc
Confidence 88743200 0 1111 1232 1222 23333 689999988 47999997654
No 227
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=83.24 E-value=5.8 Score=33.78 Aligned_cols=136 Identities=17% Similarity=0.243 Sum_probs=69.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCC-cEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCC-CCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTG-VWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPR-MGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~-~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~-~~~W~~ 219 (347)
++.||+... . +++||+..+ .|+... +... ....+..++.||+... ...+++||+. ...|+.
T Consensus 70 ~g~l~v~t~-------~-l~~~d~~g~~~~~~~~--~~~~-~~~~~~~~~~l~v~t~------~~~l~~~d~~g~~~~~~ 132 (330)
T 3hxj_A 70 DGTIYFGSD-------K-VYAINPDGTEKWRFDT--KKAI-VSDFTIFEDILYVTSM------DGHLYAINTDGTEKWRF 132 (330)
T ss_dssp TTEECCSSC-------E-EEEECCCGGGGGGSCC--------CCEEEETTEEEEECT------TSEEEEECTTSCEEEEE
T ss_pred CCcEEEecC-------c-EEEECCCCcEEEEEEC--CCCc-ccCceEECCEEEEEec------CCEEEEEcCCCCEEEEE
Confidence 667776321 2 888997433 253221 1111 1122234889988542 2468899987 345765
Q ss_pred cCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCC-eEEEcCCCCCCCcceEEEE-ECCEEEEEeccCCCC
Q psy11771 220 VPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPIAPMLSRRSTHEVVN-IEGYLLTMGGNDGSS 296 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~ 296 (347)
..+.+. ..+.+.. ++.||+... + ..+++||+... .|..-.+ ... ..+.+. -++.||+..
T Consensus 133 ~~~~~~---~~~~~~~~~g~l~vgt~-~-----~~l~~~d~~g~~~~~~~~~--~~~-~~~~~~d~~g~l~v~t------ 194 (330)
T 3hxj_A 133 KTKKAI---YATPIVSEDGTIYVGSN-D-----NYLYAINPDGTEKWRFKTN--DAI-TSAASIGKDGTIYFGS------ 194 (330)
T ss_dssp ECSSCC---CSCCEECTTSCEEEECT-T-----SEEEEECTTSCEEEEEECS--SCC-CSCCEECTTCCEEEES------
T ss_pred cCCCce---eeeeEEcCCCEEEEEcC-C-----CEEEEECCCCCEeEEEecC--CCc-eeeeEEcCCCEEEEEe------
Confidence 433221 1222333 677777432 1 47889998732 3655422 111 122233 367777654
Q ss_pred CccEEEEEeCCC-CcEEEc
Q psy11771 297 SLNSVEKYDPKL-NKWQLL 314 (347)
Q Consensus 297 ~~~~v~~yd~~~-~~W~~~ 314 (347)
..+++||... ..|+..
T Consensus 195 --~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 195 --DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp --SSEEEECTTSCEEEEEC
T ss_pred --CEEEEECCCCcEEEEEc
Confidence 2477887432 246543
No 228
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=83.14 E-value=5 Score=37.77 Aligned_cols=154 Identities=16% Similarity=0.018 Sum_probs=78.8
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
.+++..++++.+... ...++.+|..+.+++.+..-.... ...+. -+++.++.+..++ ...++.+|..+++...
T Consensus 159 pDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~~~--~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 159 IRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGSF--SSASISPGMKVTAGLETAR---EARLVTVDPRDGSVED 232 (582)
T ss_dssp EETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSCEE--EEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEE
T ss_pred CCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCCcc--ccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEE
Confidence 455555554443211 135899999888887664332221 22222 2554444332221 2579999999888773
Q ss_pred cCCCCCCCcceE-----E--EEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEecc
Q psy11771 220 VPSMSSRRSSCG-----V--AALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 220 ~~~~p~~r~~~~-----~--~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~ 292 (347)
+........... . ..-++++++.+..+ ..+..|+. ++... .+.. ...+....++++++.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-----g~~~l~~~--g~~~~---~~~~-~v~~~~~sdg~~l~~~s~ 301 (582)
T 3o4h_A 233 LELPSKDFSSYRPTAITWLGYLPDGRLAVVARRE-----GRSAVFID--GERVE---APQG-NHGRVVLWRGKLVTSHTS 301 (582)
T ss_dssp CCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEET-----TEEEEEET--TEEEC---CCSS-EEEEEEEETTEEEEEEEE
T ss_pred ccCCCcChhhhhhccccceeEcCCCcEEEEEEcC-----CcEEEEEE--CCeec---cCCC-ceEEEEecCCEEEEEEcC
Confidence 332211111111 0 23366777776543 35667777 44433 2222 112222228888877654
Q ss_pred CCCCCccEEEEEeCCCCcEEEc
Q psy11771 293 DGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
.. ....++.+|..+ +.+.+
T Consensus 302 ~~--~p~~l~~~d~~~-~~~~l 320 (582)
T 3o4h_A 302 LS--TPPRIVSLPSGE-PLLEG 320 (582)
T ss_dssp TT--EEEEEEEETTCC-EEECC
T ss_pred CC--CCCeEEEEcCCC-ceEEE
Confidence 32 135688888765 55544
No 229
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.79 E-value=8.8 Score=33.28 Aligned_cols=111 Identities=14% Similarity=0.185 Sum_probs=53.4
Q ss_pred EEEEcCcCCCC-ccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeEEEcC
Q psy11771 192 LYALGGFDSTN-YQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIA 268 (347)
Q Consensus 192 lyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 268 (347)
...+|.+.... ..-.++.+|+.+.+++.+... ....-..++. -++ .||+.+........-.++.+|..+.+.+.+.
T Consensus 15 ~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~ 93 (361)
T 3scy_A 15 TMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLN 93 (361)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEE
T ss_pred EEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEee
Confidence 33456554321 123455667788887766543 2211122222 234 5777665321111123455666667777766
Q ss_pred CCCCCCcceEEEEECCE-EEEEeccCCCCCccEEEEEeCCC
Q psy11771 269 PMLSRRSTHEVVNIEGY-LLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 269 ~~~~~~~~~~~~~~~~~-lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
..+........+.++++ ||+.+.. + ..+.+||..+
T Consensus 94 ~~~~~~~~p~~~~~dg~~l~~~~~~-~----~~v~~~~~~~ 129 (361)
T 3scy_A 94 TQKTMGADPCYLTTNGKNIVTANYS-G----GSITVFPIGQ 129 (361)
T ss_dssp EEECSSSCEEEEEECSSEEEEEETT-T----TEEEEEEBCT
T ss_pred EeccCCCCcEEEEECCCEEEEEECC-C----CEEEEEEeCC
Confidence 54432222222223554 5555432 1 3677887654
No 230
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=82.77 E-value=24 Score=33.96 Aligned_cols=145 Identities=16% Similarity=0.206 Sum_probs=66.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCcc-ceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRR-YCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~-~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++++++.|+.+ ..+.++|..+..-... +..... -.+++. .+++.++.|+.+ ..+..||.....-..
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D-----~~i~iwd~~~~~~~~ 508 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRD-----RTIKLWNTLGECKYT 508 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETT-----SCEEEECTTSCEEEE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCC-----CEEEEEECCCCccee
Confidence 34455555543 3577777766543211 111111 112222 245555666543 457778876543222
Q ss_pred cCC-CCCCCcceEEEEE--CC--EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEecc
Q psy11771 220 VPS-MSSRRSSCGVAAL--DG--AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 220 ~~~-~p~~r~~~~~~~~--~~--~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~ 292 (347)
+.. ....+.....+.+ ++ ..++.|+.+ ..+..||..+.+-...- .........+.+ ++++++.|+.
T Consensus 509 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d-----~~v~vwd~~~~~~~~~~--~~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 509 ISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD-----KTVKVWNLSNCKLRSTL--AGHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp ECSSTTSCSSCEEEEEECSCSSSCEEEEEETT-----SCEEEEETTTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEET
T ss_pred eccCCCCCCCcEEEEEEeCCCCcceEEEEeCC-----CeEEEEECCCCcEEEEE--cCCCCCEEEEEEeCCCCEEEEEeC
Confidence 221 1111222233333 22 355666654 46888888776533221 111111223333 5667777765
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
++ .+.+||..+.+
T Consensus 582 Dg-----~i~iwd~~~~~ 594 (694)
T 3dm0_A 582 DG-----VVLLWDLAEGK 594 (694)
T ss_dssp TS-----BCEEEETTTTE
T ss_pred CC-----eEEEEECCCCc
Confidence 43 35566665543
No 231
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=82.70 E-value=22 Score=30.43 Aligned_cols=153 Identities=14% Similarity=0.196 Sum_probs=85.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC-------CCC-ccceEEEEE-C-CEEEEEcCcCCCCccceEEEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM-------TTR-RRYCRIAVV-E-NCLYALGGFDSTNYQASVERLD 211 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-------~~~-r~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~yd 211 (347)
++.||+..+.. ...+.+||+.......+... +.. ....+++.. + +.|||.... ...+.+||
T Consensus 154 ~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----~~~I~~~~ 224 (329)
T 3fvz_A 154 TGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----NGRIQCFK 224 (329)
T ss_dssp TCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred CCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----CCEEEEEE
Confidence 68999997521 25688999655443333211 111 123344443 4 799998653 36799999
Q ss_pred CCCCcEEe-cCCCCCCCcceEEEEECCEEEEEcccC--CCccCCeEEEEECCCCeEEEc-CCCCCCCcceEEEEE--CCE
Q psy11771 212 PRMGKWAP-VPSMSSRRSSCGVAALDGAIYCVGGND--GTMCMSSGERFNVRRNSWEPI-APMLSRRSTHEVVNI--EGY 285 (347)
Q Consensus 212 ~~~~~W~~-~~~~p~~r~~~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~--~~~ 285 (347)
+.+.+... +..........+++...+.+|...|.. .......+..+|..+.+.... ...+........+.+ ++.
T Consensus 225 ~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 225 TDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp TTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE
T ss_pred CCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC
Confidence 98666543 222122222234444457777777642 122235789999887765443 221222222233334 679
Q ss_pred EEEEeccCCCCCccEEEEEeCCC
Q psy11771 286 LLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 286 lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
||+....+ +.|.+|++..
T Consensus 305 lyvad~~~-----~~I~~~~~~~ 322 (329)
T 3fvz_A 305 VYIGDAHT-----NTVWKFTLTE 322 (329)
T ss_dssp EEEEESSS-----CCEEEEEEEE
T ss_pred EEEEECCC-----CEEEEEeCCc
Confidence 99987543 3688887643
No 232
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=82.51 E-value=7.6 Score=40.30 Aligned_cols=106 Identities=9% Similarity=-0.033 Sum_probs=56.5
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
.++..+++|+.+ ..+..||..+.+......-.......-....+++..+.|+.+ ..+..||..+.+....
T Consensus 971 p~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~d-----g~i~vwd~~~~~~~~~ 1040 (1249)
T 3sfz_A 971 PHLEYVAFGDED-----GAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSED-----SVIQVWNWQTGDYVFL 1040 (1249)
T ss_dssp TTSSEEEEEETT-----SCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSS-----SBEEEEETTTTEEECC
T ss_pred CCCCEEEEEcCC-----CCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCC-----CEEEEEECCCCceEEE
Confidence 355666666654 347788887765432211111111111222355666666643 4688999998876654
Q ss_pred CCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 221 PSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
..... ...+++...+..++.|+.+ ..+..||..+.+
T Consensus 1041 ~~~~~--~v~~~~~~~~~~l~~~~~d-----g~v~vwd~~~~~ 1076 (1249)
T 3sfz_A 1041 QAHQE--TVKDFRLLQDSRLLSWSFD-----GTVKVWNVITGR 1076 (1249)
T ss_dssp BCCSS--CEEEEEECSSSEEEEEESS-----SEEEEEETTTTC
T ss_pred ecCCC--cEEEEEEcCCCcEEEEECC-----CcEEEEECCCCc
Confidence 43222 2223333333344555543 478889987764
No 233
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=82.11 E-value=28 Score=32.89 Aligned_cols=102 Identities=9% Similarity=-0.020 Sum_probs=56.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCC--CCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPR--MGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~--~~~W 217 (347)
++.+||.... .+.+.++|..+++-.. .++.....+.++.. +..+|+.+. ...+..||+. +.+
T Consensus 166 ~~~~~V~~~~-----~~~V~viD~~t~~v~~--~i~~g~~p~~v~~SpDGr~lyv~~~------dg~V~viD~~~~t~~- 231 (567)
T 1qks_A 166 ENLFSVTLRD-----AGQIALIDGSTYEIKT--VLDTGYAVHISRLSASGRYLFVIGR------DGKVNMIDLWMKEPT- 231 (567)
T ss_dssp GGEEEEEETT-----TTEEEEEETTTCCEEE--EEECSSCEEEEEECTTSCEEEEEET------TSEEEEEETTSSSCC-
T ss_pred CceEEEEeCC-----CCeEEEEECCCCeEEE--EEeCCCCccceEECCCCCEEEEEcC------CCeEEEEECCCCCCc-
Confidence 4567777542 2579999998876432 22222233344333 447887642 2579999995 442
Q ss_pred EecCCCCCCCcceEEEEE-----CC-EEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 218 APVPSMSSRRSSCGVAAL-----DG-AIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~-----~~-~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
.+..++.+..-..++.. +| .+|+..-. .+.+.++|..+.+
T Consensus 232 -~v~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~-----~~~v~ViD~~t~~ 277 (567)
T 1qks_A 232 -TVAEIKIGSEARSIETSKMEGWEDKYAIAGAYW-----PPQYVIMDGETLE 277 (567)
T ss_dssp -EEEEEECCSEEEEEEECCSTTCTTTEEEEEEEE-----TTEEEEEETTTCC
T ss_pred -EeEEEecCCCCceeEEccccCCCCCEEEEEEcc-----CCeEEEEECCCCc
Confidence 23333333333344444 45 56665432 2567788877654
No 234
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=81.84 E-value=23 Score=29.96 Aligned_cols=144 Identities=10% Similarity=0.056 Sum_probs=72.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc----EEeCCCCCCCccceEEEE-ECCE-EEEEcCcCCCCccceEEEEeC-CC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV----WSSCPAMTTRRRYCRIAV-VENC-LYALGGFDSTNYQASVERLDP-RM 214 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~----W~~~~~~~~~r~~~~~~~-~~~~-lyv~GG~~~~~~~~~~~~yd~-~~ 214 (347)
++.+++.|+.+ ..+.+||..+.. ...... ....-.+++. .++. .++.|+.+ ..+..||. .+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~l~~~~~d-----g~i~~wd~~~~ 89 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR--YKHPLLCCNFIDNTDLQIYVGTVQ-----GEILKVDLIGS 89 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE--CSSCEEEEEEEESSSEEEEEEETT-----SCEEEECSSSS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee--cCCceEEEEECCCCCcEEEEEcCC-----CeEEEEEeccC
Confidence 45566666644 457777776654 222221 1111122222 2566 66666643 46889999 88
Q ss_pred CcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC---e----EEEcCCCCCCCcceEEEEECCEEE
Q psy11771 215 GKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN---S----WEPIAPMLSRRSTHEVVNIEGYLL 287 (347)
Q Consensus 215 ~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~----W~~~~~~~~~~~~~~~~~~~~~ly 287 (347)
.+...+...+....-.+++...+.+++.|+.+ ..+..||..+. . .+.+..+.......++....+. +
T Consensus 90 ~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-l 163 (342)
T 1yfq_A 90 PSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR-L 163 (342)
T ss_dssp SSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE-E
T ss_pred CceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc-E
Confidence 77766554112222223333325555566654 46778876540 0 2223333322222233333455 5
Q ss_pred EEeccCCCCCccEEEEEeCCC
Q psy11771 288 TMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 288 v~GG~~~~~~~~~v~~yd~~~ 308 (347)
++|+.+ ..+.+||..+
T Consensus 164 ~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 164 IVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp EEEEST-----TEEEEEESSC
T ss_pred EEEeCC-----CeEEEEECCc
Confidence 555543 3688898877
No 235
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=81.83 E-value=24 Score=30.34 Aligned_cols=152 Identities=14% Similarity=0.137 Sum_probs=81.9
Q ss_pred EEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCC-CCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 138 TCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMT-TRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 138 ~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~-~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
+...++.+|++|. . ..+++-+-.-++|+.+.... .+-....++. -++.+|+.|.. ..+++-+-.-.
T Consensus 85 i~~~~~~~~~~g~-~-----g~i~~S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~ 152 (327)
T 2xbg_A 85 VSFQGNEGWIVGE-P-----PIMLHTTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGK 152 (327)
T ss_dssp EEEETTEEEEEEE-T-----TEEEEESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTS
T ss_pred EEecCCeEEEEEC-C-----CeEEEECCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCC
Confidence 3345678888753 1 24555444457899876431 1222233433 46788887742 23444433456
Q ss_pred cEEecCCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECC-CCeEEEcCCCCCCCcceEEEEE-CCEEEEEecc
Q psy11771 216 KWAPVPSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVR-RNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGN 292 (347)
Q Consensus 216 ~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~ 292 (347)
+|+.+...... ..++++.. ++.+|++|-. ..+++-+-. ..+|+.+.. +.....+.++.. ++++|+.+..
T Consensus 153 tW~~~~~~~~~-~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~~ 224 (327)
T 2xbg_A 153 NWQALVQEAIG-VMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVNG 224 (327)
T ss_dssp SEEEEECSCCC-CEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEETT
T ss_pred CCEEeecCCCc-ceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeCC
Confidence 89988643222 23344433 5667766532 235554333 578998854 333344444433 6788887642
Q ss_pred CCCCCccEEEEEeC-CCCcEEEcc
Q psy11771 293 DGSSSLNSVEKYDP-KLNKWQLLT 315 (347)
Q Consensus 293 ~~~~~~~~v~~yd~-~~~~W~~~~ 315 (347)
..++..+. .-.+|+.+.
T Consensus 225 ------G~~~~s~~D~G~tW~~~~ 242 (327)
T 2xbg_A 225 ------GKIAFSDPDNSENWGELL 242 (327)
T ss_dssp ------TEEEEEETTEEEEECCCB
T ss_pred ------ceEEEecCCCCCeeEecc
Confidence 13555532 256798765
No 236
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=81.82 E-value=17 Score=34.02 Aligned_cols=140 Identities=11% Similarity=-0.044 Sum_probs=72.6
Q ss_pred CeEEEEeC--CCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE
Q psy11771 158 SSMERYDP--LTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL 235 (347)
Q Consensus 158 ~~~~~~d~--~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 235 (347)
..++..+. ....- .+......+ ..+...-++.++++.+.. +....||..+.+-..+...+. ......-
T Consensus 90 ~~l~~~~~~~~g~~~-~l~~~~~~~-~~~~s~dg~~~~~~s~~~-----~~~~l~d~~~g~~~~l~~~~~---~~~~~sp 159 (582)
T 3o4h_A 90 HALFKVNTSRPGEEQ-RLEAVKPMR-ILSGVDTGEAVVFTGATE-----DRVALYALDGGGLRELARLPG---FGFVSDI 159 (582)
T ss_dssp EEEEEEETTSTTCCE-ECTTSCSBE-EEEEEECSSCEEEEEECS-----SCEEEEEEETTEEEEEEEESS---CEEEEEE
T ss_pred eEEEEEeccCCCccc-cccCCCCce-eeeeCCCCCeEEEEecCC-----CCceEEEccCCcEEEeecCCC---ceEEECC
Confidence 35666776 33332 333333222 222322344555554422 234477888877666654333 2233344
Q ss_pred CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcEEE
Q psy11771 236 DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~ 313 (347)
+|+..++++.+... ...++.+|..+.+++.+..-... .....+ +|+.++.+..++ ...++.+|..+++...
T Consensus 160 DG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~~~~~---~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 160 RGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDSGEGS---FSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVED 232 (582)
T ss_dssp ETTEEEEEEEEETT-EEEEEEEETTTCCCEEECCSSCE---EEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEEE
T ss_pred CCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeecCCCc---cccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEEE
Confidence 66555544433221 14599999999888876543211 122333 565444433222 2579999999888773
Q ss_pred c
Q psy11771 314 L 314 (347)
Q Consensus 314 ~ 314 (347)
+
T Consensus 233 ~ 233 (582)
T 3o4h_A 233 L 233 (582)
T ss_dssp C
T ss_pred c
Confidence 3
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=81.80 E-value=0.57 Score=41.85 Aligned_cols=106 Identities=15% Similarity=0.108 Sum_probs=44.3
Q ss_pred EEECCEEEEEcCcCCCCccceEEEEeCCCC--cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC-
Q psy11771 186 AVVENCLYALGGFDSTNYQASVERLDPRMG--KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN- 262 (347)
Q Consensus 186 ~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~- 262 (347)
+..++.||+.+. ...++++|..+. .|+... .. ...+.+..++.+|+.++.+ ..++++|.+++
T Consensus 6 ~v~~~~v~~gs~------dg~v~a~d~~tG~~~W~~~~--~~--~~s~p~~~~g~~~v~~s~d-----g~l~a~d~~tG~ 70 (369)
T 2hz6_A 6 TLPETLLFVSTL------DGSLHAVSKRTGSIKWTLKE--DP--VLQVPTHVEEPAFLPDPND-----GSLYTLGSKNNE 70 (369)
T ss_dssp --CTTEEEEEET------TSEEEEEETTTCCEEEEEEC--CC--SCCCC-----CCEEECTTT-----CCEEEC-----C
T ss_pred eeeCCEEEEEcC------CCEEEEEECCCCCEEEEecC--CC--ceecceEcCCCEEEEeCCC-----CEEEEEECCCCc
Confidence 345677777543 246899998775 487643 11 1122344567788876543 46889998654
Q ss_pred -eEEEcCCCCCCCcceEEEE-ECCEEEEEeccCCCCCccEEEEEeCCCCc--EEE
Q psy11771 263 -SWEPIAPMLSRRSTHEVVN-IEGYLLTMGGNDGSSSLNSVEKYDPKLNK--WQL 313 (347)
Q Consensus 263 -~W~~~~~~~~~~~~~~~~~-~~~~lyv~GG~~~~~~~~~v~~yd~~~~~--W~~ 313 (347)
.|+.-...+... ..+.+. .++.||+ |+. ...++++|+++.+ |+.
T Consensus 71 ~~w~~~~~~~~~~-~~sp~~~~~~~v~~-g~~-----dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 71 GLTKLPFTIPELV-QASPCRSSDGILYM-GKK-----QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp CSEECSCCHHHHH-TTCSCC-----CCC-CEE-----EEEEEEECCC--------
T ss_pred eeeeeeccCcccc-ccCceEecCCEEEE-EeC-----CCEEEEEECCCCcEEEEe
Confidence 465422211100 011111 3455554 322 1358888877553 653
No 238
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=81.19 E-value=9 Score=34.40 Aligned_cols=102 Identities=13% Similarity=0.126 Sum_probs=50.4
Q ss_pred EEEEcCcCCCCccceEEEEeCCCC---cEEe--cCCC-CCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 192 LYALGGFDSTNYQASVERLDPRMG---KWAP--VPSM-SSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 192 lyv~GG~~~~~~~~~~~~yd~~~~---~W~~--~~~~-p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
+++.|+.+ ..+..||..+. .+.. ...+ .....-.+++.. ++.+++.|+.+ ..+..||..+..
T Consensus 196 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~~~ 265 (430)
T 2xyi_A 196 YLLSASDD-----HTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRNNN 265 (430)
T ss_dssp EEEEECTT-----SCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCSC
T ss_pred eEEEEeCC-----CeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCCCC
Confidence 66666643 45788888762 1211 1111 111112223322 45677777654 578899987652
Q ss_pred -EEEcCCCCCCCcceEEEEE--CC-EEEEEeccCCCCCccEEEEEeCCC
Q psy11771 264 -WEPIAPMLSRRSTHEVVNI--EG-YLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 264 -W~~~~~~~~~~~~~~~~~~--~~-~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
...+..+........++.+ ++ .+++.|+.+ ..+.+||..+
T Consensus 266 ~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~ 309 (430)
T 2xyi_A 266 TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRN 309 (430)
T ss_dssp SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 1111111111122233344 23 478888754 3588888765
No 239
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=80.97 E-value=29 Score=30.70 Aligned_cols=102 Identities=13% Similarity=0.031 Sum_probs=61.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc--E-EeCCC--CCCCccceEEEE-E--CCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV--W-SSCPA--MTTRRRYCRIAV-V--ENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~--W-~~~~~--~~~~r~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++++|+|-| +.+|+|+..... + +.+.. +|..-....++. . ++++|+|-| +..|+||..
T Consensus 236 ~g~~~fFkg-------~~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~ 301 (365)
T 3ba0_A 236 RNQVFLFKD-------DKYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDER 301 (365)
T ss_dssp GTEEEEEET-------TEEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETT
T ss_pred CCEEEEEeC-------CEEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCC
Confidence 789999977 668888754221 1 12322 232111222222 2 579999987 678999987
Q ss_pred CCcEEec---------CCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 214 MGKWAPV---------PSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 214 ~~~W~~~---------~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
+++-..- +.+|. .--++... ++++|.+-| +..|+||..+.+-..
T Consensus 302 ~~~v~~gyPk~I~~~f~g~p~--~iDaA~~~~~g~~YfFkg-------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 302 RQMMDPGYPKLITKNFQGIGP--KIDAVFYSKNKYYYFFQG-------SNQFEYDFLLQRITK 355 (365)
T ss_dssp TTEECSSCCCCHHHHSTTCCS--SCSEEEEETTTEEEEEET-------TEEEEEETTTTEEEE
T ss_pred cceecCCCCcchhhcCCCCCC--ccceeeEecCCcEEEEeC-------CEEEEEECCccEEec
Confidence 6643221 12232 22344445 889999977 689999998876544
No 240
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=80.96 E-value=16 Score=31.75 Aligned_cols=155 Identities=10% Similarity=-0.084 Sum_probs=74.1
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcC-CCCccceEEEEeCCCCcEEecCCCCCCCcceE-EEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFD-STNYQASVERLDPRMGKWAPVPSMSSRRSSCG-VAA 234 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~-~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~-~~~ 234 (347)
..++.+|..+.+-+.+...+. ........- +++..++.... .......++.+|..+.....+........... ...
T Consensus 168 ~~l~~~d~~~g~~~~l~~~~~-~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~s 246 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQENQ-WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWV 246 (388)
T ss_dssp EEEEEEETTTCCEEEEEEESS-CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEEC
T ss_pred ceEEEEECCCCceEEeecCCc-cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceEC
Confidence 568999998887655532221 122222233 44433332221 11224679999988777666654332111111 222
Q ss_pred ECCE-EEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCC------CcceEEEEECC-EEEEEe----ccCCCCCccEEE
Q psy11771 235 LDGA-IYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSR------RSTHEVVNIEG-YLLTMG----GNDGSSSLNSVE 302 (347)
Q Consensus 235 ~~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~------~~~~~~~~~~~-~lyv~G----G~~~~~~~~~v~ 302 (347)
-+|+ |+.+.... ......++.+|+.+.+-+.+..++.. .... ...-++ .|++.. |+. ......++
T Consensus 247 pdg~~l~~~~~~~-~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~-~~spdg~~l~~~~~~~~~~~-~~~~~~i~ 323 (388)
T 3pe7_A 247 PDGSALVYVSYLK-GSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGS-LMVGDGSDAPVDVQDDSGYK-IENDPFLY 323 (388)
T ss_dssp TTSSCEEEEEEET-TCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSS-EEEEEECCC-------------CCCCEEE
T ss_pred CCCCEEEEEecCC-CCCcceEEEEecCCCceEEEEcCCCceeeeecCCCC-eEccCCCcceeEeeeccccc-cCCCCEEE
Confidence 2554 54443221 11112599999998876666443320 0001 122233 233221 000 01235799
Q ss_pred EEeCCCCcEEEccC
Q psy11771 303 KYDPKLNKWQLLTP 316 (347)
Q Consensus 303 ~yd~~~~~W~~~~~ 316 (347)
.+|+.+++-+.+..
T Consensus 324 ~~d~~~~~~~~l~~ 337 (388)
T 3pe7_A 324 VFNMKNGTQHRVAR 337 (388)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEeccCCceEEecc
Confidence 99999888766653
No 241
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=80.16 E-value=23 Score=28.90 Aligned_cols=103 Identities=14% Similarity=0.158 Sum_probs=58.0
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCC-CcEE-----eCC---CCCCC--ccceEEEEE---CCEEEEEcCcCCCC
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLT-GVWS-----SCP---AMTTR--RRYCRIAVV---ENCLYALGGFDSTN 202 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~-~~W~-----~~~---~~~~~--r~~~~~~~~---~~~lyv~GG~~~~~ 202 (347)
++...++++|+|-| +.+|+|+..+ .+-. .+. .+|.. .....+|.. ++++|++-|
T Consensus 67 AA~~~~~~~yfFkG-------~~yw~~~~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG----- 134 (219)
T 1hxn_A 67 AAFSWEDKLYLIQD-------TKVYVFLTKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG----- 134 (219)
T ss_dssp EEEEETTEEEEEET-------TEEEEEECSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-----
T ss_pred EEEEECCcEEEecC-------CEEEEEeCCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-----
Confidence 44445899999988 6799998653 2111 111 12222 112233332 579999988
Q ss_pred ccceEEEEeCCCC---cEEecCCCCCCCcceEEEE-----------ECCEEEEEcccCCCccCCeEEEEECCC
Q psy11771 203 YQASVERLDPRMG---KWAPVPSMSSRRSSCGVAA-----------LDGAIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 203 ~~~~~~~yd~~~~---~W~~~~~~p~~r~~~~~~~-----------~~~~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
+..|+||..+. .|...+.+|.. ...+... .++.+|++-| +..++||..+
T Consensus 135 --~~ywr~d~~~~P~~i~~~~~g~p~~-vdAa~~~~~~~~~~~~~~~~~~~YFFkg-------~~y~r~~~~~ 197 (219)
T 1hxn_A 135 --RRLWWLDLKSGAQATWTELPWPHEK-VDGALCMEKPLGPNSCSTSGPNLYLIHG-------PNLYCYRHVD 197 (219)
T ss_dssp --TEEEEEEGGGGGGCCCEEECCSCSC-CSEEEEESSCSSSCCSCSSSCEEEEEET-------TEEEEESSHH
T ss_pred --CEEEEEeCCCCceEhhhcCCCCCCC-cCEEEEccccccccceeccCCeEEEEEC-------CEEEEEeCCc
Confidence 67899996542 34333333322 2223321 3467899877 4677776643
No 242
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=80.14 E-value=29 Score=30.20 Aligned_cols=154 Identities=12% Similarity=0.033 Sum_probs=78.8
Q ss_pred EECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 140 SFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 140 ~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
..++++.++++.. ....+.++|+.+.+.......... -.+++.. ++++++.++ .+.+..++..+....
T Consensus 142 SpDg~~la~as~~---~d~~i~iwd~~~~~~~~~~~~~~~--V~~v~fspdg~~l~s~s------~~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 142 SREGTVAAIASSK---VPAIMRIIDPSDLTEKFEIETRGE--VKDLHFSTDGKVVAYIT------GSSLEVISTVTGSCI 210 (365)
T ss_dssp CTTSSCEEEEESC---SSCEEEEEETTTTEEEEEEECSSC--CCEEEECTTSSEEEEEC------SSCEEEEETTTCCEE
T ss_pred cCCCCEEEEEECC---CCCEEEEeECCCCcEEEEeCCCCc--eEEEEEccCCceEEecc------ceeEEEEEeccCcce
Confidence 3466655543321 124688899988764332111111 1223332 556656554 245677777776644
Q ss_pred ecCCCCCCCcceE--EEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEecc
Q psy11771 219 PVPSMSSRRSSCG--VAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA--PMLSRRSTHEVVNI--EGYLLTMGGN 292 (347)
Q Consensus 219 ~~~~~p~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~GG~ 292 (347)
............. ...-++..++.++.++.. ...+..+|.......... .+........++.+ ++++++.|+.
T Consensus 211 ~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 211 ARKTDFDKNWSLSKINFIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EEECCCCTTEEEEEEEEEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 3322221111122 223477877777654322 124666776666554322 11111122233444 7888888886
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
++ .|.+||.++.+
T Consensus 290 D~-----~V~iwd~~~~~ 302 (365)
T 4h5i_A 290 DN-----SIALVKLKDLS 302 (365)
T ss_dssp TS-----CEEEEETTTTE
T ss_pred CC-----EEEEEECCCCc
Confidence 53 58899988765
No 243
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=79.65 E-value=27 Score=29.47 Aligned_cols=104 Identities=14% Similarity=0.123 Sum_probs=54.7
Q ss_pred CCE-EEEEcccCCCCCCCeEEEEeC-CCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCC---c
Q psy11771 142 DGL-LYACGGYDGASCLSSMERYDP-LTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMG---K 216 (347)
Q Consensus 142 ~~~-lyv~GG~~~~~~~~~~~~~d~-~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~---~ 216 (347)
++. .++.|+.+ ..+.+||. .+.+...+...+....-.+++...+..++.|+.+ ..+..||..+. .
T Consensus 67 ~~~~~l~~~~~d-----g~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 67 NTDLQIYVGTVQ-----GEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD-----GLIEVIDPRNYGDGV 136 (342)
T ss_dssp SSSEEEEEEETT-----SCEEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETT-----SEEEEECHHHHTTBC
T ss_pred CCCcEEEEEcCC-----CeEEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCC-----CeEEEEccccccccc
Confidence 566 66777754 35888998 8877655543111111122222324445555533 46778887640 0
Q ss_pred ----EEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCC
Q psy11771 217 ----WAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 217 ----W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
.+.+..+.......++....+. +++|+.+ ..+..||..+
T Consensus 137 ~~~~~~~~~~~~~~~~v~~~~~~~~~-l~~~~~d-----~~i~i~d~~~ 179 (342)
T 1yfq_A 137 IAVKNLNSNNTKVKNKIFTMDTNSSR-LIVGMNN-----SQVQWFRLPL 179 (342)
T ss_dssp EEEEESCSSSSSSCCCEEEEEECSSE-EEEEEST-----TEEEEEESSC
T ss_pred ccccCCeeeEEeeCCceEEEEecCCc-EEEEeCC-----CeEEEEECCc
Confidence 2233333333223344444555 5555443 4788999877
No 244
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=79.61 E-value=29 Score=29.76 Aligned_cols=140 Identities=12% Similarity=0.121 Sum_probs=65.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWS-SCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+++.|+.+ ..+.++|..+.+.. .+..-. ..-.+++.. +++.++.||.+ ..+..||.....-..
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~~h~--~~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 154 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFVGHQ--SEVYSVAFSPDNRQILSAGAE-----REIKLWNILGECKFS 154 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEECCC--SCEEEEEECSSTTEEEEEETT-----SCEEEEESSSCEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEcCCC--CcEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCceee
Confidence 45566667654 46888898876542 221111 111122222 45555666643 457788876443333
Q ss_pred cCCCCCCCcceEEEEEC------------CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCE
Q psy11771 220 VPSMSSRRSSCGVAALD------------GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGY 285 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~~------------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~ 285 (347)
.............+.+. +.+++.|+.+ ..+..||.....-..+..- ......+.+ +++
T Consensus 155 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~h---~~~v~~~~~s~~g~ 226 (343)
T 2xzm_R 155 SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWD-----GRLKVWNTNFQIRYTFKAH---ESNVNHLSISPNGK 226 (343)
T ss_dssp CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETT-----SEEEEEETTTEEEEEEECC---SSCEEEEEECTTSS
T ss_pred eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCC-----CEEEEEcCCCceeEEEcCc---cccceEEEECCCCC
Confidence 22221111112222221 1355666654 4677788433211111111 111222333 566
Q ss_pred EEEEeccCCCCCccEEEEEeC
Q psy11771 286 LLTMGGNDGSSSLNSVEKYDP 306 (347)
Q Consensus 286 lyv~GG~~~~~~~~~v~~yd~ 306 (347)
.++.|+.+ ..+.+||.
T Consensus 227 ~l~sgs~d-----g~v~iwd~ 242 (343)
T 2xzm_R 227 YIATGGKD-----KKLLIWDI 242 (343)
T ss_dssp EEEEEETT-----CEEEEEES
T ss_pred EEEEEcCC-----CeEEEEEC
Confidence 67777654 25777776
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=79.37 E-value=28 Score=29.57 Aligned_cols=155 Identities=10% Similarity=0.066 Sum_probs=81.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCC--C-ccceEEEEE--CCEEEEEcCcCC------------CCcc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTT--R-RRYCRIAVV--ENCLYALGGFDS------------TNYQ 204 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~--~-r~~~~~~~~--~~~lyv~GG~~~------------~~~~ 204 (347)
++.|||.... ..+.++|+.++..+.+..... + .....++.. ++.+|+.-.... ....
T Consensus 91 ~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 91 NNQLYIVDCY------YHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp TTEEEEEETT------TEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred CCcEEEEECC------CCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCC
Confidence 5789988431 347889988765544432111 1 112233333 578998743211 0123
Q ss_pred ceEEEEeCCCCcEEecC-CCCCCCcceEEEEE-CC-EEEEEcccCCCccCCeEEEEECCC---CeEEEcCCCCCCCcceE
Q psy11771 205 ASVERLDPRMGKWAPVP-SMSSRRSSCGVAAL-DG-AIYCVGGNDGTMCMSSGERFNVRR---NSWEPIAPMLSRRSTHE 278 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~-~~-~iyv~GG~~~~~~~~~v~~yd~~~---~~W~~~~~~~~~~~~~~ 278 (347)
..+++||+.+.+...+. .+..+ ..++.- ++ .||+.-.. ...+++||... ...+.+..++- ..
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~~p---~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~~~~~~~~~~g----P~ 232 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELHVP---GGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKGTAEVLVKIPN----PG 232 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEESCC---CEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTTCEEEEEECSS----EE
T ss_pred ceEEEEeCCCCEEEEeccCCccC---cceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCCccceEEeCCC----CC
Confidence 56899999877765432 12111 233333 33 58887432 26899999875 23443333221 22
Q ss_pred EEEE--CCEEEEEeccCCC-----CCccEEEEEeCCCCcEEEc
Q psy11771 279 VVNI--EGYLLTMGGNDGS-----SSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 279 ~~~~--~~~lyv~GG~~~~-----~~~~~v~~yd~~~~~W~~~ 314 (347)
.+.+ +|.||+....... .....+.+||+....-..+
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~ 275 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVI 275 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEE
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEE
Confidence 2333 5789987542100 0124689999975544444
No 246
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=78.89 E-value=38 Score=32.46 Aligned_cols=103 Identities=12% Similarity=0.131 Sum_probs=53.6
Q ss_pred EEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCC
Q psy11771 192 LYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPM 270 (347)
Q Consensus 192 lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~ 270 (347)
.++.|+.+ ..+..||..+.+-...-.-.... -.+++. -++.+++.||.+ ..+..||..+.+- +..+
T Consensus 533 ~l~s~s~d-----~~v~vwd~~~~~~~~~~~~h~~~-v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~~--~~~~ 599 (694)
T 3dm0_A 533 TIVSASWD-----KTVKVWNLSNCKLRSTLAGHTGY-VSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGKK--LYSL 599 (694)
T ss_dssp EEEEEETT-----SCEEEEETTTCCEEEEECCCSSC-EEEEEECTTSSEEEEEETT-----SBCEEEETTTTEE--EECC
T ss_pred eEEEEeCC-----CeEEEEECCCCcEEEEEcCCCCC-EEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCce--EEEe
Confidence 45555543 45888898776543221111111 122222 256777777765 4678899887753 2223
Q ss_pred CCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 271 LSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 271 ~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
.......+++...+..+++++.+ +.+.+||..+.+-.
T Consensus 600 ~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~~ 636 (694)
T 3dm0_A 600 EANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSIV 636 (694)
T ss_dssp BCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEE
T ss_pred cCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCCh
Confidence 22222333333333334444432 35889998877543
No 247
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=78.47 E-value=12 Score=34.02 Aligned_cols=143 Identities=12% Similarity=0.086 Sum_probs=76.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcE--
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKW-- 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-- 217 (347)
++.||+.--. ..+.++|+.++....+... ......++.. ++.||+....... ....+..++... .|
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNNN-DRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSCT-TSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCCc-ccceEEEEeCCC-ceee
Confidence 4789988431 6789999999887665431 1122233332 3459998653321 123456666543 22
Q ss_pred -EecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC-EEEEEecc
Q psy11771 218 -APVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG-YLLTMGGN 292 (347)
Q Consensus 218 -~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~-~lyv~GG~ 292 (347)
..++.+..+ +.+++- ++.||+.--. ...+++||+.+..-..+...+....-..++.. ++ .||+.--.
T Consensus 219 ~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~ 290 (430)
T 3tc9_A 219 ITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVN 290 (430)
T ss_dssp EEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred eeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECC
Confidence 233333322 333433 6789987432 25799999987765333322221111223333 44 49997542
Q ss_pred CCCCCccEEEEEeCC
Q psy11771 293 DGSSSLNSVEKYDPK 307 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~ 307 (347)
.+.|+++|+.
T Consensus 291 -----~~~I~~~~~d 300 (430)
T 3tc9_A 291 -----QHYILRSDYD 300 (430)
T ss_dssp -----TTEEEEEEEE
T ss_pred -----CCEEEEEeCC
Confidence 2467776644
No 248
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=78.39 E-value=30 Score=29.33 Aligned_cols=101 Identities=9% Similarity=0.019 Sum_probs=54.4
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE---ECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV---VENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
++..++.|+.+ ..+.+||..+.+.........+ -.+++. .++.+++.|+.+ ..+..||..+.+-.
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~--v~~~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~ 164 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQHDAP--VKTIHWIKAPNYSCVMTGSWD-----KTLKFWDTRSSNPM 164 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECSSC--EEEEEEEECSSCEEEEEEETT-----SEEEEECSSCSSCS
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeeccccCc--eEEEEEEeCCCCCEEEEccCC-----CcEEEEECCCCcEE
Confidence 55666666654 4688899988875543222211 122222 356777777644 46888998765421
Q ss_pred ecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 219 PVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 219 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
..+.......+.....+.+++.++. ..+..||....
T Consensus 165 --~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~~~~~~ 200 (368)
T 3mmy_A 165 --MVLQLPERCYCADVIYPMAVVATAE------RGLIVYQLENQ 200 (368)
T ss_dssp --EEEECSSCEEEEEEETTEEEEEEGG------GCEEEEECSSS
T ss_pred --EEEecCCCceEEEecCCeeEEEeCC------CcEEEEEeccc
Confidence 1111122233444455655554432 45777877654
No 249
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=78.22 E-value=26 Score=35.72 Aligned_cols=104 Identities=13% Similarity=0.037 Sum_probs=57.1
Q ss_pred ceEE-EEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE
Q psy11771 205 ASVE-RLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI 282 (347)
Q Consensus 205 ~~~~-~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 282 (347)
..++ .||..+.+-..+.. .... ...++. -+++..++++.. ..++.+|..+.+-..+..-........+..-
T Consensus 358 ~~l~~~~d~~~~~~~~l~~-~~~~-~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFEE-NLGN-VFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp EEEEEEEETTTCCEEECCC-CCCS-EEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred CceEEEEECCCCCceEecC-Cccc-eeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECC
Confidence 5688 88988877666551 1122 222222 356655555432 4899999998876665421222111112222
Q ss_pred CCEEEEEeccCC-----CCCccEEEEEeCCCCcEEEcc
Q psy11771 283 EGYLLTMGGNDG-----SSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 283 ~~~lyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~ 315 (347)
+++.+++++... ......+++||..+.+...+.
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 666555554322 112357999999887755554
No 250
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=77.91 E-value=21 Score=30.41 Aligned_cols=143 Identities=6% Similarity=-0.104 Sum_probs=72.8
Q ss_pred CCeEEEEeCCCCcEEeCCCCCCCccceEEEEECC-EEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE
Q psy11771 157 LSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVEN-CLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL 235 (347)
Q Consensus 157 ~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 235 (347)
...++.+|..+.+-..+ .........-++ .|+.... ........++.+|..+.+...+...+. .....+
T Consensus 42 ~~~l~~~d~~~~~~~~l-----~~~~~~~~SpDg~~la~~~~-~~~~~~~~l~~~~~~~g~~~~l~~~~~----~~~~~w 111 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI-----ENATMPRISPDGKKIAFMRA-NEEKKVSEIWVADLETLSSKKILEAKN----IRSLEW 111 (347)
T ss_dssp EEEEEEEETTTCCEEEE-----ESCEEEEECTTSSEEEEEEE-ETTTTEEEEEEEETTTTEEEEEEEESE----EEEEEE
T ss_pred cceEEEEeCCCCceEEc-----ccCCCeEECCCCCEEEEEEe-ccCCCcceEEEEECCCCceEEEEcCCC----ccceeE
Confidence 45689999988776555 111111112244 4444332 211123568899998887766544332 222222
Q ss_pred --CCE-EEEEccc-----------------CCC----ccCCeEEEEECCCCeE-EEcCCCCCCCcceEEEEECCEEEEEe
Q psy11771 236 --DGA-IYCVGGN-----------------DGT----MCMSSGERFNVRRNSW-EPIAPMLSRRSTHEVVNIEGYLLTMG 290 (347)
Q Consensus 236 --~~~-iyv~GG~-----------------~~~----~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~~~~lyv~G 290 (347)
+++ |++.... ++. .....++.+|+.+++. ..+.. + .....+...+.+++.+
T Consensus 112 spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~~~~~~spdg~~~~~ 187 (347)
T 2gop_A 112 NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RFSSGIWHRDKIVVNV 187 (347)
T ss_dssp CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TTCEEEEETTEEEEEE
T ss_pred CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---CcccccCCCCeEEEEE
Confidence 454 4444311 000 0125689999998887 66554 3 2223333333355555
Q ss_pred ccCCCC---C-ccEEEEEeCCCCcEEEcc
Q psy11771 291 GNDGSS---S-LNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 291 G~~~~~---~-~~~v~~yd~~~~~W~~~~ 315 (347)
...... . ...++.+| +.+++.+.
T Consensus 188 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 188 PHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp ECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ecccccccccccccEEEeC--CCceEEec
Confidence 433211 1 45788888 66676654
No 251
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=76.81 E-value=38 Score=29.94 Aligned_cols=92 Identities=16% Similarity=0.231 Sum_probs=51.9
Q ss_pred ceEEEEeCCCCcEEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE
Q psy11771 205 ASVERLDPRMGKWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI 282 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~ 282 (347)
++++.||..+++-..+-.+......-..+.+ ++..++.|+.+ ..+..||.++.+-...- ........++..
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D-----g~v~iWd~~~~~~~~~~--~~h~~~v~~~s~ 197 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS-----AEVQLWDVQQQKRLRNM--TSHSARVGSLSW 197 (420)
T ss_dssp TEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTEEEEEE--CCCSSCEEEEEE
T ss_pred CEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC-----CeEEEEEcCCCcEEEEE--eCCCCceEEEee
Confidence 5788899988876655443332222233333 57777788765 46889999887543221 111222334555
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++.+.+.|+.++ .+..+|...
T Consensus 198 ~~~~l~sgs~d~-----~i~~~d~~~ 218 (420)
T 4gga_A 198 NSYILSSGSRSG-----HIHHHDVRV 218 (420)
T ss_dssp ETTEEEEEETTS-----EEEEEETTS
T ss_pred CCCEEEEEeCCC-----ceeEeeecc
Confidence 677777776532 344555443
No 252
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=76.22 E-value=44 Score=30.10 Aligned_cols=127 Identities=17% Similarity=0.221 Sum_probs=77.1
Q ss_pred CCCcEE--eCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEE--Ee----CCCCcE-EecC-CCCCCCcceEEEEE
Q psy11771 166 LTGVWS--SCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVER--LD----PRMGKW-APVP-SMSSRRSSCGVAAL 235 (347)
Q Consensus 166 ~~~~W~--~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~--yd----~~~~~W-~~~~-~~p~~r~~~~~~~~ 235 (347)
..+.|+ .++.++....-|+.+.+++.-|++|=.+++.....+=. |. .-...- +.++ .....-...++-.+
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyY 347 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYY 347 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhh
Confidence 344564 45666766677889999988889987666643344322 21 111111 2222 22333334566678
Q ss_pred CCEEEEEc-ccCCCccCCeEEEEECCCCeEEEcCC-CCCCCcceEEEEECCEEEEEecc
Q psy11771 236 DGAIYCVG-GNDGTMCMSSGERFNVRRNSWEPIAP-MLSRRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 236 ~~~iyv~G-G~~~~~~~~~v~~yd~~~~~W~~~~~-~~~~~~~~~~~~~~~~lyv~GG~ 292 (347)
+++||++- |......-+++.+-+.....|+.+.- -..-......+..++.||+||-.
T Consensus 348 dgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 348 DGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp TTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred CCEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 99999985 44444555677777777788988742 22222333456789999999964
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=75.70 E-value=32 Score=28.23 Aligned_cols=148 Identities=11% Similarity=-0.019 Sum_probs=80.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.||+.-.. ...+.++|+....-..+..... ....+++.. ++.||+.... ...+.++++....-+.
T Consensus 47 ~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~-~~p~~ia~d~~~~~lyv~d~~-----~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 47 DKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQDL-GSPEGIALDHLGRTIFWTDSQ-----LDRIEVAKMDGTQRRV 115 (267)
T ss_dssp TTEEEEEETT-----TTEEEEEESSSCCCEEEECTTC-CCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEE
T ss_pred CCEEEEEECC-----CCEEEEEecCCCCcEEEEECCC-CCccEEEEEecCCeEEEEECC-----CCEEEEEEcCCCCEEE
Confidence 5789988542 2578999987764332211111 122344443 5799998542 3578889887543332
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEeccCCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGNDGS 295 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~ 295 (347)
+.+... ..-..++.- ++.||+..... ....++++++....-+.+..... ..-.+++.- +++||+.-..
T Consensus 116 ~~~~~~-~~P~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~--- 187 (267)
T 1npe_A 116 LFDTGL-VNPRGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG--- 187 (267)
T ss_dssp EECSSC-SSEEEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT---
T ss_pred EEECCC-CCccEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC---
Confidence 221111 112334443 68999985321 12578888876543333321111 122233333 4789997643
Q ss_pred CCccEEEEEeCCCCc
Q psy11771 296 SSLNSVEKYDPKLNK 310 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~ 310 (347)
.+.|.+||+....
T Consensus 188 --~~~I~~~~~~g~~ 200 (267)
T 1npe_A 188 --THRAECLNPAQPG 200 (267)
T ss_dssp --TTEEEEEETTEEE
T ss_pred --CCEEEEEecCCCc
Confidence 3579999987543
No 254
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=75.62 E-value=37 Score=28.96 Aligned_cols=147 Identities=10% Similarity=-0.003 Sum_probs=83.0
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC--CCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCP--AMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++.||+.-.. .+.+.++|+....-+.+. .+..| .+++.. ++.||+..-. ....++++++....
T Consensus 87 ~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~----~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 87 IHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 154 (316)
T ss_dssp TTTEEEEEETT-----TTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCC
T ss_pred cCCeEEEEECC-----CCEEEEEeCCCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC----CCCeEEEEcCCCCC
Confidence 47899988432 357888998765433322 22222 234443 6899998531 12578999987544
Q ss_pred EEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCC-CCCCcceEEEEECCEEEEEeccC
Q psy11771 217 WAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPM-LSRRSTHEVVNIEGYLLTMGGND 293 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~-~~~~~~~~~~~~~~~lyv~GG~~ 293 (347)
-+.+..- ....-.+++.- +++||+.-.. ...++++|.....-+.+... .....-.++++.++.||+.--.
T Consensus 155 ~~~~~~~-~~~~P~gla~d~~~~~lY~~D~~-----~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~- 227 (316)
T 1ijq_A 155 IYSLVTE-NIQWPNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII- 227 (316)
T ss_dssp EEEEECS-SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT-
T ss_pred eEEEEEC-CCCCceEEEEeccCCEEEEEECC-----CCeEEEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC-
Confidence 3333211 11122344443 6899998533 36899999875332222211 1112224566678999997632
Q ss_pred CCCCccEEEEEeCCCCc
Q psy11771 294 GSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 294 ~~~~~~~v~~yd~~~~~ 310 (347)
.+.|.++|+.+.+
T Consensus 228 ----~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 228 ----NEAIFSANRLTGS 240 (316)
T ss_dssp ----TTEEEEEETTTCC
T ss_pred ----CCeEEEEeCCCCc
Confidence 2478888876543
No 255
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=75.38 E-value=36 Score=28.71 Aligned_cols=146 Identities=12% Similarity=0.085 Sum_probs=80.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.||+.--. ...++++|+..+. ......+ ..-++++.. ++++||...... ...++.||+.+.+.+.+
T Consensus 42 ~g~lyv~d~~-----~~~I~~~d~~g~~-~~~~~~~--~~p~gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 42 DGTIFVTNHE-----VGEIVSITPDGNQ-QIHATVE--GKVSGLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETL 110 (306)
T ss_dssp TSCEEEEETT-----TTEEEEECTTCCE-EEEEECS--SEEEEEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEE
T ss_pred CCCEEEEeCC-----CCeEEEECCCCce-EEEEeCC--CCceeEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEE
Confidence 6778888432 2568999987653 2211111 123334433 578988753211 13588899888887776
Q ss_pred CCCCCCCcceEEEEE-CCEEEEEcccCCCccCCeEEEEECCCCe---EEEcCC----CCCC--CcceEEEEECCEEEEEe
Q psy11771 221 PSMSSRRSSCGVAAL-DGAIYCVGGNDGTMCMSSGERFNVRRNS---WEPIAP----MLSR--RSTHEVVNIEGYLLTMG 290 (347)
Q Consensus 221 ~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~~---W~~~~~----~~~~--~~~~~~~~~~~~lyv~G 290 (347)
...+..+.....+.. ++.+|+.-.. ...++++|+.+.. |..-.. .+.. ....++..-++.||+.-
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~-----~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d 185 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSY-----RGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSN 185 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETT-----TTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEE
T ss_pred EeCCCccccCcccccCCCcEEEEECC-----CCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEe
Confidence 655555544444433 4567776321 2589999997642 211110 1111 11222322256788875
Q ss_pred ccCCCCCccEEEEEeCCC
Q psy11771 291 GNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 291 G~~~~~~~~~v~~yd~~~ 308 (347)
-. .+.+++||+..
T Consensus 186 ~~-----~~~I~~~~~~~ 198 (306)
T 2p4o_A 186 TE-----KMLLLRIPVDS 198 (306)
T ss_dssp TT-----TTEEEEEEBCT
T ss_pred CC-----CCEEEEEEeCC
Confidence 32 35789998764
No 256
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=74.89 E-value=29 Score=29.04 Aligned_cols=103 Identities=11% Similarity=0.045 Sum_probs=52.2
Q ss_pred ceEEEEeCCCCcEEecCCCCCCC-cceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCC----Ccce
Q psy11771 205 ASVERLDPRMGKWAPVPSMSSRR-SSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSR----RSTH 277 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~p~~r-~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~----~~~~ 277 (347)
..+..+|+.+.+-...-..+... ....++. -++ .+|+.+... ..+..||+.+.+-...-..+.+ ....
T Consensus 11 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~ 85 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKS-----ESLVKIDLVTGETLGRIDLSTPEERVKSLF 85 (337)
T ss_dssp TEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTT-----TEEEEEETTTCCEEEEEECCBTTEEEECTT
T ss_pred CeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCC-----CeEEEEECCCCCeEeeEEcCCccccccccc
Confidence 57888998877544322222210 0122222 244 677776532 5799999988764332111110 0112
Q ss_pred EEEEE-CC-EEEEEecc---CCCC---CccEEEEEeCCCCcEE
Q psy11771 278 EVVNI-EG-YLLTMGGN---DGSS---SLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 278 ~~~~~-~~-~lyv~GG~---~~~~---~~~~v~~yd~~~~~W~ 312 (347)
.++.. ++ .||+.... .... ....+.+||+.+.+..
T Consensus 86 ~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~ 128 (337)
T 1pby_B 86 GAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRR 128 (337)
T ss_dssp CEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEE
T ss_pred ceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEE
Confidence 23333 44 67776421 0000 1257999999887654
No 257
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=74.34 E-value=41 Score=28.85 Aligned_cols=150 Identities=11% Similarity=0.138 Sum_probs=79.8
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCC-CCCc-cceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEe
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM-TTRR-RYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAP 219 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~-~~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~ 219 (347)
++.+|++|- . ..+++-+-...+|+.+... +.+. ...++...++.+|++|.. ..+++-+-.-.+|+.
T Consensus 46 ~~~~~~~G~-~-----g~i~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~~------g~i~~S~DgG~tW~~ 113 (327)
T 2xbg_A 46 RHHGWLVGV-N-----ATLMETRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGEP------PIMLHTTDGGQSWSQ 113 (327)
T ss_dssp SSCEEEEET-T-----TEEEEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEET------TEEEEESSTTSSCEE
T ss_pred CCcEEEEcC-C-----CeEEEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEECC------CeEEEECCCCCCceE
Confidence 456787653 2 2355544445689987532 2222 233445557789987531 234443333578999
Q ss_pred cCCCC-CCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCEEEEEeccCCCC
Q psy11771 220 VPSMS-SRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGYLLTMGGNDGSS 296 (347)
Q Consensus 220 ~~~~p-~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~~~ 296 (347)
+.... .+-....++. -++.+|++|.. ..+++-+-.-.+|+.+...... ..++++.. ++++|++|.. +
T Consensus 114 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~------g~v~~S~DgG~tW~~~~~~~~~-~~~~~~~~~~~~~~~~g~~-G-- 183 (327)
T 2xbg_A 114 IPLDPKLPGSPRLIKALGNGSAEMITNV------GAIYRTKDSGKNWQALVQEAIG-VMRNLNRSPSGEYVAVSSR-G-- 183 (327)
T ss_dssp CCCCTTCSSCEEEEEEEETTEEEEEETT------CCEEEESSTTSSEEEEECSCCC-CEEEEEECTTSCEEEEETT-S--
T ss_pred CccccCCCCCeEEEEEECCCCEEEEeCC------ccEEEEcCCCCCCEEeecCCCc-ceEEEEEcCCCcEEEEECC-C--
Confidence 86432 1111233333 46788887742 2455554456689998643222 33444443 5677766531 1
Q ss_pred CccEEEEEe-CCCCcEEEccC
Q psy11771 297 SLNSVEKYD-PKLNKWQLLTP 316 (347)
Q Consensus 297 ~~~~v~~yd-~~~~~W~~~~~ 316 (347)
.++.-+ ..-.+|+.+..
T Consensus 184 ---~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 184 ---SFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp ---SEEEEECTTCSSCEEEEC
T ss_pred ---cEEEEeCCCCCceeECCC
Confidence 244433 22577887743
No 258
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=72.89 E-value=39 Score=27.97 Aligned_cols=93 Identities=9% Similarity=-0.015 Sum_probs=47.1
Q ss_pred ceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--
Q psy11771 205 ASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-- 282 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-- 282 (347)
..+..+|..+..-..................++.+++.+|... ..+..||..+.+- +..+..-......+.+
T Consensus 221 ~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d----~~i~iwd~~~~~~--~~~l~gH~~~V~~l~~sp 294 (318)
T 4ggc_A 221 RHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQ----NQLVIWKYPTMAK--VAELKGHTSRVLSLTMSP 294 (318)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTT----CCEEEEETTTCCE--EEEECCCSSCEEEEEECT
T ss_pred CEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCC----CEEEEEECCCCcE--EEEEcCCCCCEEEEEEcC
Confidence 4577788877654433222222211122222456666555432 4688899877542 2222211112223333
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++++++.||.++ .+.+||..+
T Consensus 295 dg~~l~S~s~D~-----~v~iWd~~~ 315 (318)
T 4ggc_A 295 DGATVASAAADE-----TLRLWRCFE 315 (318)
T ss_dssp TSSCEEEEETTT-----EEEEECCSC
T ss_pred CCCEEEEEecCC-----eEEEEECCC
Confidence 677777777643 577777643
No 259
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=72.58 E-value=64 Score=30.32 Aligned_cols=150 Identities=12% Similarity=0.096 Sum_probs=77.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEe-CCC--C---CCCccceEEEEE-CCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSS-CPA--M---TTRRRYCRIAVV-ENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~--~---~~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
++++++.||.+ ..+..+|..+.+... +.. + .....-.+++.. +++.++.|+.+ ..+..||..+
T Consensus 201 dg~~las~s~D-----~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~ 270 (611)
T 1nr0_A 201 DGSLFASTGGD-----GTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVAT 270 (611)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTT
T ss_pred CCCEEEEEECC-----CcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCC
Confidence 55666666654 357788877665432 211 0 111111222222 56666666643 5688899988
Q ss_pred CcEEecCCCCCC-CcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEEEEec
Q psy11771 215 GKWAPVPSMSSR-RSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGG 291 (347)
Q Consensus 215 ~~W~~~~~~p~~-r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~lyv~GG 291 (347)
.+....-..... ......+..++..++.++.+ ..+..||+.+.+-...-. .-......+.+ +++.++.|+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-----~~i~~~~~~~~~~~~~~~--gh~~~v~~l~~spdg~~l~s~s 343 (611)
T 1nr0_A 271 LKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN-----GFINFVNPELGSIDQVRY--GHNKAITALSSSADGKTLFSAD 343 (611)
T ss_dssp TEEEEEEECCSSGGGCEEEEEECSSCEEEEETT-----CCEEEEETTTTEEEEEEC--CCSSCEEEEEECTTSSEEEEEE
T ss_pred CceeeeecCCCCccceeEEEEEcCCEEEEEeCC-----CcEEEEeCCCCCcceEEc--CCCCCEEEEEEeCCCCEEEEEe
Confidence 765432221111 11223334466666666554 457778887765322111 11111223333 566677777
Q ss_pred cCCCCCccEEEEEeCCCCcEEE
Q psy11771 292 NDGSSSLNSVEKYDPKLNKWQL 313 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W~~ 313 (347)
.++ .+..||..+.+-..
T Consensus 344 ~D~-----~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 344 AEG-----HINSWDISTGISNR 360 (611)
T ss_dssp TTS-----CEEEEETTTCCEEE
T ss_pred CCC-----cEEEEECCCCceee
Confidence 543 57788887765543
No 260
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=72.19 E-value=12 Score=33.53 Aligned_cols=147 Identities=12% Similarity=0.093 Sum_probs=69.5
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc-EEeCCCCCCCccceEEEEE---CCEEEEEcCcCCCCccceEEEEeCCCCcE
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV-WSSCPAMTTRRRYCRIAVV---ENCLYALGGFDSTNYQASVERLDPRMGKW 217 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~~W 217 (347)
++.+++.|+.+ ..+.+||..+.. .+.+..+........+... +..+++.|+.+ ..+..||..+..
T Consensus 243 ~~~~l~s~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~d-----g~v~vwd~~~~~- 311 (430)
T 2xyi_A 243 HESLFGSVADD-----QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSAD-----KTVALWDLRNLK- 311 (430)
T ss_dssp CTTEEEEEETT-----SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTCTT-
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEeCCCCC-
Confidence 45566666643 458888887652 1111111111111222222 33477787754 568889987532
Q ss_pred EecCCCCCCCcceEEEEE---CCEEEEEcccCCCccCCeEEEEECCCC---------------eEEEcCCCCCCCcceEE
Q psy11771 218 APVPSMSSRRSSCGVAAL---DGAIYCVGGNDGTMCMSSGERFNVRRN---------------SWEPIAPMLSRRSTHEV 279 (347)
Q Consensus 218 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~---------------~W~~~~~~~~~~~~~~~ 279 (347)
..+..+.........+.+ +..+++.||.+ ..+..||..+. .-.... ........
T Consensus 312 ~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~---~h~~~v~~ 383 (430)
T 2xyi_A 312 LKLHSFESHKDEIFQVQWSPHNETILASSGTD-----RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHG---GHTAKISD 383 (430)
T ss_dssp SCSEEEECCSSCEEEEEECSSCTTEEEEEETT-----SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECC---CCSSCEEE
T ss_pred CCeEEeecCCCCEEEEEECCCCCCEEEEEeCC-----CcEEEEeCCCCccccCccccccCCcceEEEcC---CCCCCceE
Confidence 011111111111222233 23577777754 45777777651 111111 11111222
Q ss_pred EEE--CCE-EEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 280 VNI--EGY-LLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 280 ~~~--~~~-lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
+.+ ++. +++.++.+ +.+.+|++.++.+.
T Consensus 384 ~~~~p~~~~~l~s~s~d-----g~i~iw~~~~~~~~ 414 (430)
T 2xyi_A 384 FSWNPNEPWIICSVSED-----NIMQVWQMAENVYN 414 (430)
T ss_dssp EEECSSSTTEEEEEETT-----SEEEEEEECHHHHC
T ss_pred EEECCCCCCEEEEEECC-----CCEEEeEccccccc
Confidence 333 445 66767653 46888888776654
No 261
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=71.96 E-value=67 Score=30.25 Aligned_cols=126 Identities=10% Similarity=-0.004 Sum_probs=67.3
Q ss_pred ceEEEEeCCCCcEEecCCCCCCCcceEEEEE-CCE-EEEEcccCCCccCCeEEEEECCCCeEEE---c-CCCCCCCcceE
Q psy11771 205 ASVERLDPRMGKWAPVPSMSSRRSSCGVAAL-DGA-IYCVGGNDGTMCMSSGERFNVRRNSWEP---I-APMLSRRSTHE 278 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-~~~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~---~-~~~~~~~~~~~ 278 (347)
..++..|..+.....+..++.++..|....- +++ +|+.... .+.+.++|..+++=.. + ...|.+..+..
T Consensus 320 g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~-----sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~ 394 (567)
T 1qks_A 320 GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANA-----RNKLVVIDTKEGKLVAIEDTGGQTPHPGRGAN 394 (567)
T ss_dssp TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGG-----GTEEEEEETTTTEEEEEEECSSSSBCCTTCEE
T ss_pred CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCC-----CCeEEEEECCCCcEEEEEeccCcCCCCcccee
Confidence 5677778776554444444555555554432 444 4444322 3689999999886332 2 33454433333
Q ss_pred EEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc-----EEEccCCCCCcceeEEEEEcCCCcceEEEEcC
Q psy11771 279 VVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK-----WQLLTPMLTRRSSIGAAVLETLNIEKRLLVAP 342 (347)
Q Consensus 279 ~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-----W~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~ 342 (347)
. .. .+.+|+.+-.. ...|.++|..+.+ |+.+..++..- .+..-+......+++|+.-
T Consensus 395 ~-~~p~~g~v~~t~~~g----~~~Vsvid~~~~~~~~~~~kvv~~i~~~g--~g~~~i~~~p~~~~l~v~~ 458 (567)
T 1qks_A 395 F-VHPTFGPVWATSHMG----DDSVALIGTDPEGHPDNAWKILDSFPALG--GGSLFIKTHPNSQYLYVDA 458 (567)
T ss_dssp E-EETTTEEEEEEEBSS----SSEEEEEECCTTTCTTTBTSEEEEEECSC--SCCCCEECCTTCSEEEEEC
T ss_pred e-ECCCCCcEEEeCCCC----CCeEEEecCCCCCCccccCEEEEEEecCC--CCCEEEEeCCCCCeEEEec
Confidence 2 33 36788765322 1368888876633 88776544321 1112222334456666644
No 262
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=70.61 E-value=48 Score=28.00 Aligned_cols=66 Identities=11% Similarity=0.143 Sum_probs=35.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEE-ecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWA-PVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
++...+.|+.+ ..+..||..+.+-. .+..-... -.++.. -++.+++.|+.+ ..+..||.....-..
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~~h~~~--v~~~~~~~~~~~l~s~s~D-----~~i~vwd~~~~~~~~ 143 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFVGHKSD--VMSVDIDKKASMIISGSRD-----KTIKVWTIKGQCLAT 143 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEECCSSC--EEEEEECTTSCEEEEEETT-----SCEEEEETTSCEEEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEccCCCc--EEEEEEcCCCCEEEEEeCC-----CeEEEEECCCCeEEE
Confidence 55566666643 56888998876532 22211111 122222 256677777765 467788887654333
No 263
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=70.43 E-value=50 Score=28.15 Aligned_cols=109 Identities=10% Similarity=-0.019 Sum_probs=60.6
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEE-EECCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
++.+|+++.. ...+++||+.+++...... +. ...+++ .-++++++... ..+++||+.+.+.+.+
T Consensus 60 ~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~-~~--~v~~i~~~~dg~l~v~~~-------~gl~~~d~~~g~~~~~ 124 (326)
T 2ghs_A 60 SGTAWWFNIL-----ERELHELHLASGRKTVHAL-PF--MGSALAKISDSKQLIASD-------DGLFLRDTATGVLTLH 124 (326)
T ss_dssp TTEEEEEEGG-----GTEEEEEETTTTEEEEEEC-SS--CEEEEEEEETTEEEEEET-------TEEEEEETTTCCEEEE
T ss_pred CCEEEEEECC-----CCEEEEEECCCCcEEEEEC-CC--cceEEEEeCCCeEEEEEC-------CCEEEEECCCCcEEEE
Confidence 3678887643 2578999998876554432 22 122222 34788887642 3599999998888776
Q ss_pred CCCCCC--CcceEEEEE--CCEEEEEecc-CCCCCccEEEEEeCCCCcEEEc
Q psy11771 268 APMLSR--RSTHEVVNI--EGYLLTMGGN-DGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 268 ~~~~~~--~~~~~~~~~--~~~lyv~GG~-~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
...+.. ......+.+ ++++|+.... ........+++|| +.+...+
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 543321 111222223 5777764321 1111234688887 4555443
No 264
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=68.26 E-value=65 Score=28.66 Aligned_cols=144 Identities=13% Similarity=0.077 Sum_probs=77.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC---CCCCCccc-e-EEEEE--CCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCP---AMTTRRRY-C-RIAVV--ENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~~~~r~~-~-~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
++.||+... ...+++||+.+.....+. ........ + .++.. ++.+|+.... ...+++|++..
T Consensus 230 ~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~-----~~~I~~~~~~g 298 (409)
T 3hrp_A 230 EEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN-----LSSVYKITPDG 298 (409)
T ss_dssp SSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT-----TTEEEEECTTC
T ss_pred CCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC-----CCEEEEEecCC
Confidence 688998422 247999999887654431 11111122 2 44444 5899998532 35788998765
Q ss_pred CcEEecCCC-CC---------C-CcceEEEEE--CCEEEEEcc-cCCCccCCeEEEEECCCCeEEEcCCCC---------
Q psy11771 215 GKWAPVPSM-SS---------R-RSSCGVAAL--DGAIYCVGG-NDGTMCMSSGERFNVRRNSWEPIAPML--------- 271 (347)
Q Consensus 215 ~~W~~~~~~-p~---------~-r~~~~~~~~--~~~iyv~GG-~~~~~~~~~v~~yd~~~~~W~~~~~~~--------- 271 (347)
..-...... .. . ........+ ++.||+.-. . ...+.++|+.+..-..+...+
T Consensus 299 ~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~-----~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~ 373 (409)
T 3hrp_A 299 ECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK-----GYCLRKLDILDGYVSTVAGQVDVASQIDGT 373 (409)
T ss_dssp CEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT-----TCEEEEEETTTTEEEEEEECTTCBSCCCBS
T ss_pred CEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC-----CCEEEEEECCCCEEEEEeCCCCCCCcCCCC
Confidence 422211111 00 0 111223333 577999854 3 267999997677665543211
Q ss_pred --CCC-cceEEEEE--CCEEEEEeccCCCCCccEEEEEeC
Q psy11771 272 --SRR-STHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDP 306 (347)
Q Consensus 272 --~~~-~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~ 306 (347)
..+ .....+.+ ++.||+....+ +.|.++++
T Consensus 374 ~~~~~~~~P~giavd~~g~lyVad~~n-----~~Ir~i~~ 408 (409)
T 3hrp_A 374 PLEATFNYPYDICYDGEGGYWIAEAWG-----KAIRKYAV 408 (409)
T ss_dssp TTTCCBSSEEEEEECSSSEEEEEESTT-----CEEEEEEE
T ss_pred hhceEeCCceEEEEcCCCCEEEEECCC-----CeEEEEEe
Confidence 011 12233333 58899876432 35666654
No 265
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=66.65 E-value=74 Score=28.69 Aligned_cols=112 Identities=13% Similarity=0.141 Sum_probs=70.8
Q ss_pred EEEEEEEECCEEEEEcccCCCCCCCeEE--EEeC-----CCCcEEeCCC-CCCCccceEEEEECCEEEEEc-CcCCCCcc
Q psy11771 134 FAIGTCSFDGLLYACGGYDGASCLSSME--RYDP-----LTGVWSSCPA-MTTRRRYCRIAVVENCLYALG-GFDSTNYQ 204 (347)
Q Consensus 134 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~--~~d~-----~~~~W~~~~~-~~~~r~~~~~~~~~~~lyv~G-G~~~~~~~ 204 (347)
-.|+.+.+++.=|.+|=.+++..-..+- .|.. ..-.-++++. ........++-.+++.||++- |......-
T Consensus 285 e~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvkyYdgvLyLtTRgt~~~~~G 364 (670)
T 3ju4_A 285 EVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKYYDGVLYLITRGTRGDRLG 364 (670)
T ss_dssp EEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEEETTEEEEEEEESCTTSCC
T ss_pred eeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhhhCCEEEEEecCcCCCCCc
Confidence 4679999999999999887765555532 2221 1111233332 222334455556799999974 44444556
Q ss_pred ceEEEEeCCCCcEEecCCC-CCCCcceEEEEECCEEEEEccc
Q psy11771 205 ASVERLDPRMGKWAPVPSM-SSRRSSCGVAALDGAIYCVGGN 245 (347)
Q Consensus 205 ~~~~~yd~~~~~W~~~~~~-p~~r~~~~~~~~~~~iyv~GG~ 245 (347)
+.+.+-+.....|+.+.-. ..-....-.+.+++.||++|..
T Consensus 365 S~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsE 406 (670)
T 3ju4_A 365 SSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSE 406 (670)
T ss_dssp CEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEEC
T ss_pred ceeeeecccCCchhheeccccccccCCCcceeCCEEEEEecc
Confidence 7888888888999987532 2233344457789999999864
No 266
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=65.41 E-value=64 Score=27.47 Aligned_cols=105 Identities=18% Similarity=0.217 Sum_probs=50.7
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcE-----EeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVW-----SSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRM 214 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-----~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~ 214 (347)
++.+++.||.++ .+.++|..+..- .....+....... +++.. ++.+.+.|+.+ ..+..||..+
T Consensus 38 d~~~l~sgs~D~-----~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D-----~~v~lwd~~~ 107 (343)
T 2xzm_R 38 DSPVLISGSRDK-----TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD-----KTLRLWDLRT 107 (343)
T ss_dssp CCCEEEEEETTS-----CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT-----SEEEEEETTS
T ss_pred CCCEEEEEcCCC-----EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC-----CcEEEEECCC
Confidence 667888888653 466666544321 0111111111111 12222 45555666543 5688899887
Q ss_pred CcEEe-cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 215 GKWAP-VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 215 ~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
.+... +..-.. .-.+++. -++...+.||.+ ..+..||.....
T Consensus 108 ~~~~~~~~~h~~--~v~~v~~sp~~~~l~s~~~d-----~~i~~wd~~~~~ 151 (343)
T 2xzm_R 108 GTTYKRFVGHQS--EVYSVAFSPDNRQILSAGAE-----REIKLWNILGEC 151 (343)
T ss_dssp SCEEEEEECCCS--CEEEEEECSSTTEEEEEETT-----SCEEEEESSSCE
T ss_pred CcEEEEEcCCCC--cEEEEEECCCCCEEEEEcCC-----CEEEEEeccCCc
Confidence 65322 221111 1122222 256666667654 467778876443
No 267
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=65.16 E-value=81 Score=30.54 Aligned_cols=146 Identities=12% Similarity=0.040 Sum_probs=80.2
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC--CCCCccceEEEE--ECCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA--MTTRRRYCRIAV--VENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++.||+.-. ..+.+.++++....-+.+.. +..++ ++++ .++.||+..-. ....++++++....
T Consensus 463 ~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~----~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 463 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 530 (699)
T ss_dssp SSSBCEECCT-----TTSCEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS----SSCCEEBCCSSSCC
T ss_pred eCCcEEEEec-----cCCeEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC----CCCeEEEEeCCCCC
Confidence 4678887632 23568888887765444322 22222 2333 36788876421 12567887775433
Q ss_pred EEecC--CCCCCCcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC-CCCcceEEEEECCEEEEEec
Q psy11771 217 WAPVP--SMSSRRSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML-SRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 217 W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~lyv~GG 291 (347)
-+.+. .+..+ .++++ .+++||++-.. ...|+++|+....-+.+.... ....-.++++.++.||+.-.
T Consensus 531 ~~~l~~~~l~~P---nGlavd~~~~~LY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~ 602 (699)
T 1n7d_A 531 IYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 602 (699)
T ss_dssp CCEESCSSCSSC---CCEEECTTTCCEEEEETT-----TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECS
T ss_pred eeEEEeCCCCCc---cEEEEeccCCEEEEEecC-----CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeC
Confidence 22221 22222 23333 25789997532 368999998654333333221 11223455667889999863
Q ss_pred cCCCCCccEEEEEeCCCCcE
Q psy11771 292 NDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~~W 311 (347)
. .+.|.++|+.+.+-
T Consensus 603 ~-----~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 603 I-----NEAIFSANRLTGSD 617 (699)
T ss_dssp T-----TTCEEEEETTTEEE
T ss_pred C-----CCeEEEEEccCCCc
Confidence 2 24689999876543
No 268
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=63.82 E-value=1.1e+02 Score=29.61 Aligned_cols=104 Identities=12% Similarity=0.065 Sum_probs=62.2
Q ss_pred cceEEEEeCCCC--c-EEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCC--CeEEEcCCCCCCCcceE
Q psy11771 204 QASVERLDPRMG--K-WAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR--NSWEPIAPMLSRRSTHE 278 (347)
Q Consensus 204 ~~~~~~yd~~~~--~-W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~--~~W~~~~~~~~~~~~~~ 278 (347)
.+.++.+|..+. . |..+.+-...... ....-++.||+....+ .....++.+|..+ ..|+.+.+-.... ...
T Consensus 293 ~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~-l~~ 368 (741)
T 1yr2_A 293 VNTVHVARVTNGKIGPVTALIPDLKAQWD-FVDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKDN-LES 368 (741)
T ss_dssp CCEEEEEEEETTEECCCEEEECSSSSCEE-EEEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSSE-EEE
T ss_pred cceEEEEECCCCCCcccEEecCCCCceEE-EEeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCCe-EEE
Confidence 568999998876 6 7777543333222 2234567788775432 2236799999987 5798875432221 122
Q ss_pred EEEECCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 279 VVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 279 ~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
....+++|++....++ ...++.+|...+.-..+
T Consensus 369 ~~~~~~~lv~~~~~dg---~~~l~~~~~~g~~~~~l 401 (741)
T 1yr2_A 369 VGIAGNRLFASYIHDA---KSQVLAFDLDGKPAGAV 401 (741)
T ss_dssp EEEEBTEEEEEEEETT---EEEEEEEETTSCEEEEC
T ss_pred EEEECCEEEEEEEECC---EEEEEEEeCCCCceeec
Confidence 3334788887765433 34688888755544433
No 269
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=62.73 E-value=64 Score=28.38 Aligned_cols=106 Identities=9% Similarity=0.055 Sum_probs=56.1
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEe-cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAP-VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
++.+++.|+.+ ..+..||..+.+-.. +...+....-.+++. -++...+.|+.+ ..+..||..+.+...
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~~~~ 250 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNVLIR 250 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCccEEE
Confidence 46677777643 568899998765322 221111111222222 256777777765 468899998865433
Q ss_pred cCCCCCCCcceEEEEE------CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 267 IAPMLSRRSTHEVVNI------EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 267 ~~~~~~~~~~~~~~~~------~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
.-..+.. .....+.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 251 ~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~ 294 (437)
T 3gre_A 251 SWSFGDH-APITHVEVCQFYGKNSVIVVGGSSK-----TFLTIWNFVKGH 294 (437)
T ss_dssp EEBCTTC-EEEEEEEECTTTCTTEEEEEEESTT-----EEEEEEETTTTE
T ss_pred EEecCCC-CceEEEEeccccCCCccEEEEEcCC-----CcEEEEEcCCCc
Confidence 2111111 11112211 24455656543 368899988765
No 270
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=62.59 E-value=44 Score=34.43 Aligned_cols=155 Identities=12% Similarity=0.103 Sum_probs=85.5
Q ss_pred ccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcE-EecCC----CCCCCcceEEEEE---CCEEEEEcccCCCccC
Q psy11771 180 RRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKW-APVPS----MSSRRSSCGVAAL---DGAIYCVGGNDGTMCM 251 (347)
Q Consensus 180 r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W-~~~~~----~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~ 251 (347)
..++++...++.+ ++|.-+.....-.++.|+.....| ..... +.....+.++++- ++..+++|--. ....
T Consensus 334 q~GfSa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP~-~~~~ 411 (1095)
T 3k6s_A 334 QEGFSAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAPR-YQHT 411 (1095)
T ss_dssp CTTSSEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEETT-GGGT
T ss_pred cccccceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEccc-cccc
Confidence 3455566555555 788765555566788888765443 33221 2233334444432 23456666321 2234
Q ss_pred CeEEEEECCCCeEEEcCCC----CCCCcceEEEEEC------CEEEEEeccCC--CCCccEEEEEeCCC--CcEEEccCC
Q psy11771 252 SSGERFNVRRNSWEPIAPM----LSRRSTHEVVNIE------GYLLTMGGNDG--SSSLNSVEKYDPKL--NKWQLLTPM 317 (347)
Q Consensus 252 ~~v~~yd~~~~~W~~~~~~----~~~~~~~~~~~~~------~~lyv~GG~~~--~~~~~~v~~yd~~~--~~W~~~~~~ 317 (347)
..++.|......|.....+ .-...+.+++..| +.|+++|.-.. ......+++|.-.. ..|.....+
T Consensus 412 G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l 491 (1095)
T 3k6s_A 412 GKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVL 491 (1095)
T ss_dssp CEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSC
T ss_pred ceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEe
Confidence 6788998877778765322 2234556666542 35777774221 12234688886443 458744332
Q ss_pred ------CCCcceeEEEEEcCCCcce
Q psy11771 318 ------LTRRSSIGAAVLETLNIEK 336 (347)
Q Consensus 318 ------~~~r~~~~~~~~~~~~~~~ 336 (347)
+..|++.+++.+++.+-..
T Consensus 492 ~g~~~~~~~~FG~sva~~gD~NgDG 516 (1095)
T 3k6s_A 492 YGEQGHPWGRFGAALTVLGDVNGDK 516 (1095)
T ss_dssp CCCCSCSSCCBTSCEEEEECSSSSS
T ss_pred ecccCCccccCccceEeecccCCCC
Confidence 3467888888877655443
No 271
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=62.08 E-value=47 Score=31.84 Aligned_cols=103 Identities=12% Similarity=0.155 Sum_probs=56.5
Q ss_pred EEEEECCEEEEEcCcCCCCccceEEEEeCCCC-cEE--ec----CCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEE
Q psy11771 184 RIAVVENCLYALGGFDSTNYQASVERLDPRMG-KWA--PV----PSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGE 255 (347)
Q Consensus 184 ~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~-~W~--~~----~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~ 255 (347)
+++..++++|+|-| +..|+++.... ... .+ +.+|... ..+... .++++|++-| +..|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~I-DAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEKI-DAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSSC-SBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCccc-eEEEEECCCCEEEEEec-------CEEE
Confidence 45566889999987 56777775542 111 11 2344322 222112 2688999977 5788
Q ss_pred EEECCCC--eE-EEcCC--CCCC--CcceEEEE--ECCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 256 RFNVRRN--SW-EPIAP--MLSR--RSTHEVVN--IEGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 256 ~yd~~~~--~W-~~~~~--~~~~--~~~~~~~~--~~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
+|+..+- -+ +.+.. +|.. +..+ +.. .++++|+|-| +..|.||..++
T Consensus 513 ry~~~~l~~GYPk~Is~~G~P~~~~~IDA-Af~~~~~gktYFFkG-------~~ywryd~~~~ 567 (631)
T 1ck7_A 513 IYSASTLERGYPKPLTSLGLPPDVQRVDA-AFNWSKNKKTYIFAG-------DKFWRYNEVKK 567 (631)
T ss_dssp EEETTEECTTCCEEGGGGTCCTTCCCCCB-CCCCTTTCEEEEEET-------TEEEEEETTTT
T ss_pred EECCCccccCCCccchhcCCCCCCCccee-EEEecCCCeEEEEEC-------CEEEEEcCCcc
Confidence 9985310 00 11211 2211 1221 222 3689999988 47899997665
No 272
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=61.06 E-value=82 Score=27.25 Aligned_cols=107 Identities=9% Similarity=0.135 Sum_probs=57.9
Q ss_pred ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecC--CCCCCCc-ceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCe
Q psy11771 188 VENCLYALGGFDSTNYQASVERLDPRMGKWAPVP--SMSSRRS-SCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNS 263 (347)
Q Consensus 188 ~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 263 (347)
-++..++.++.+... ...+..+|.......... .+..... -.+++. -++++.+.|+.+ .++..||..+.+
T Consensus 229 pdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D-----~~V~iwd~~~~~ 302 (365)
T 4h5i_A 229 ADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND-----NSIALVKLKDLS 302 (365)
T ss_dssp ETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTE
T ss_pred CCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC-----CEEEEEECCCCc
Confidence 477777777654321 234666776665544321 1111111 122222 367888888765 478899998865
Q ss_pred EEEcCCCCCCC-cceEEEEE--CCEEEEEeccCCCCCccEEEEEeCC
Q psy11771 264 WEPIAPMLSRR-STHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPK 307 (347)
Q Consensus 264 W~~~~~~~~~~-~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~ 307 (347)
-. ..+..+. .....+.+ ++++++.|+.+ +.|.++|..
T Consensus 303 ~~--~~~~~gH~~~V~~v~fSpdg~~laS~S~D-----~tvrvw~ip 342 (365)
T 4h5i_A 303 MS--KIFKQAHSFAITEVTISPDSTYVASVSAA-----NTIHIIKLP 342 (365)
T ss_dssp EE--EEETTSSSSCEEEEEECTTSCEEEEEETT-----SEEEEEECC
T ss_pred EE--EEecCcccCCEEEEEECCCCCEEEEEeCC-----CeEEEEEcC
Confidence 32 2111111 12234444 68888877764 368888864
No 273
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=58.85 E-value=1.3e+02 Score=28.85 Aligned_cols=102 Identities=15% Similarity=0.108 Sum_probs=61.9
Q ss_pred ceEEEEeCCCC--cEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCC---eEEEcCCCCCCCcceEE
Q psy11771 205 ASVERLDPRMG--KWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN---SWEPIAPMLSRRSTHEV 279 (347)
Q Consensus 205 ~~~~~yd~~~~--~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~---~W~~~~~~~~~~~~~~~ 279 (347)
+.++.+|..+. .|..+..-..... ......++.||+....+. ....++.+|..+. .|+.+.+-..... +.
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~-~~~~~~g~~l~~~t~~~~--~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~ 333 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADV-SLVDNKGSTLYLLTNRDA--PNRRLVTVDAANPGPAHWRDLIPERQQVL--TV 333 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCE-EEEEEETTEEEEEECTTC--TTCEEEEEETTSCCGGGCEEEECCCSSCE--EE
T ss_pred cEEEEEECCCCCCceEEEeCCCCceE-EEEeccCCEEEEEECCCC--CCCEEEEEeCCCCCccccEEEecCCCCEE--EE
Confidence 68999998765 6777654332222 223445789998865432 2468999998763 4887654333222 44
Q ss_pred EEECCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 280 VNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 280 ~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
...++.|++..-.++ ...++.+|........+
T Consensus 334 s~~g~~lv~~~~~~g---~~~l~~~d~~g~~~~~l 365 (693)
T 3iuj_A 334 HSGSGYLFAEYMVDA---TARVEQFDYEGKRVREV 365 (693)
T ss_dssp EEETTEEEEEEEETT---EEEEEEECTTSCEEEEE
T ss_pred EEECCEEEEEEEECC---eeEEEEEECCCCeeEEe
Confidence 445677766543322 34688898886655554
No 274
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=58.37 E-value=62 Score=28.86 Aligned_cols=70 Identities=11% Similarity=0.076 Sum_probs=42.0
Q ss_pred ECCEEEEEcCc--CC--CCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECC--EEEEEcccCCCccCCeEEEEECC
Q psy11771 188 VENCLYALGGF--DS--TNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDG--AIYCVGGNDGTMCMSSGERFNVR 260 (347)
Q Consensus 188 ~~~~lyv~GG~--~~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~--~iyv~GG~~~~~~~~~v~~yd~~ 260 (347)
-++++||.-+. .+ ....+.++.+|+.+.+-.. .++.+....+++. -++ .+|+..+. .+++.+||..
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~ 362 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAE 362 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETT
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECC
Confidence 36799997321 11 1235789999999876433 2222222223333 354 57776543 2689999999
Q ss_pred CCeE
Q psy11771 261 RNSW 264 (347)
Q Consensus 261 ~~~W 264 (347)
+.+-
T Consensus 363 t~k~ 366 (386)
T 3sjl_D 363 SGEE 366 (386)
T ss_dssp TCCE
T ss_pred CCcE
Confidence 8864
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=58.08 E-value=95 Score=27.04 Aligned_cols=138 Identities=17% Similarity=0.163 Sum_probs=70.6
Q ss_pred EEECCEEEEEcccCCCCCCCeEEEEeCCCCc---EEeCCCCCCCcc-ceEEEEE--CCEEEEEcCcCCCCccceEEEEeC
Q psy11771 139 CSFDGLLYACGGYDGASCLSSMERYDPLTGV---WSSCPAMTTRRR-YCRIAVV--ENCLYALGGFDSTNYQASVERLDP 212 (347)
Q Consensus 139 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~~~~r~-~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~ 212 (347)
+--++++||.+... ...++++++.... |-.-.+....+. .-+++.. ++.|++..+ . ..++.||.
T Consensus 144 vD~~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~-----g~L~~fD~ 213 (334)
T 2p9w_A 144 QDRDGNSYVAFALG----MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P-----RALTAFDV 213 (334)
T ss_dssp ECTTSCEEEEEEES----SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S-----SSEEEEEC
T ss_pred ECCCCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C-----CeEEEEcC
Confidence 33468999976532 1569999997653 543222223333 3345555 447777765 2 55889998
Q ss_pred CCCcEEecCC----CC-CCCcceE--EEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcC---CCC---CCCcceEE
Q psy11771 213 RMGKWAPVPS----MS-SRRSSCG--VAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA---PML---SRRSTHEV 279 (347)
Q Consensus 213 ~~~~W~~~~~----~p-~~r~~~~--~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~~---~~~~~~~~ 279 (347)
.+-....++. .. .....-. ..-++|++.++.-.. +.++.+-...+ |+... ..| ..+...+.
T Consensus 214 ~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~~-----~~~~~l~S~Dg-W~sa~~~g~~~~~~~~~g~tt~ 287 (334)
T 2p9w_A 214 SKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGARA-----PYAISFRSWDN-WKSANIKKTKRSELQNSGFTAV 287 (334)
T ss_dssp SSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEET-----TEEEEEECSST-TSEEEEEEEECGGGGSSCEEEE
T ss_pred CCCcceeecccccCCcccccCcccccccccCCEEEEEEcCC-----CCEEEEECCCC-cceeEEeeeecCccccCceeEE
Confidence 7432201110 00 1111112 223688885554321 34455544444 87653 111 13333334
Q ss_pred EE----ECCEEEEEecc
Q psy11771 280 VN----IEGYLLTMGGN 292 (347)
Q Consensus 280 ~~----~~~~lyv~GG~ 292 (347)
++ .+++||++.++
T Consensus 288 t~~~~~~~~~iYvv~~~ 304 (334)
T 2p9w_A 288 ADYYQGSEQGLYAVSAF 304 (334)
T ss_dssp EEEEETTEEEEEEEECC
T ss_pred EEeccccCCeEEEEeee
Confidence 34 57899999864
No 276
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=56.93 E-value=1.3e+02 Score=28.21 Aligned_cols=105 Identities=15% Similarity=0.186 Sum_probs=55.4
Q ss_pred EEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccce-EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEe-cC
Q psy11771 145 LYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYC-RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAP-VP 221 (347)
Q Consensus 145 lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~-~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~ 221 (347)
.++.|+.+ ..+..||..+.+... .+....... +++.. ++++++.||.+ ..+..||..+.+-.. +.
T Consensus 162 ~l~s~s~D-----~~v~lwd~~~~~~~~--~l~~H~~~V~~v~fspdg~~las~s~D-----~~i~lwd~~~g~~~~~~~ 229 (611)
T 1nr0_A 162 RIISGSDD-----NTVAIFEGPPFKFKS--TFGEHTKFVHSVRYNPDGSLFASTGGD-----GTIVLYNGVDGTKTGVFE 229 (611)
T ss_dssp EEEEEETT-----SCEEEEETTTBEEEE--EECCCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEECB
T ss_pred EEEEEeCC-----CeEEEEECCCCeEee--eeccccCceEEEEECCCCCEEEEEECC-----CcEEEEECCCCcEeeeec
Confidence 56666654 347777866544322 222221122 22222 56777777654 468888887765432 21
Q ss_pred C--C---CCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 222 S--M---SSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 222 ~--~---p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
. + .....-.+++. -+++..+.|+.+ ..+..||..+.+...
T Consensus 230 ~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D-----~~v~lWd~~~~~~~~ 275 (611)
T 1nr0_A 230 DDSLKNVAHSGSVFGLTWSPDGTKIASASAD-----KTIKIWNVATLKVEK 275 (611)
T ss_dssp CTTSSSCSSSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEE
T ss_pred cccccccccCCCEEEEEECCCCCEEEEEeCC-----CeEEEEeCCCCceee
Confidence 1 0 11111122222 256777777764 578899998876644
No 277
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=56.08 E-value=87 Score=31.79 Aligned_cols=105 Identities=10% Similarity=-0.016 Sum_probs=56.7
Q ss_pred CeEE-EEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE
Q psy11771 158 SSME-RYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL 235 (347)
Q Consensus 158 ~~~~-~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~ 235 (347)
..++ .+|..+.....+. ........++. -+++..++++.. ..++.+|..+.+-..+..-...........-
T Consensus 358 ~~l~~~~d~~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~~~~~v~~~~~Sp 430 (1045)
T 1k32_A 358 GDFLGIYDYRTGKAEKFE--ENLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERSREAMITDFTISD 430 (1045)
T ss_dssp EEEEEEEETTTCCEEECC--CCCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEECSSSCCCCEEECT
T ss_pred CceEEEEECCCCCceEec--CCccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccCCCCCccceEECC
Confidence 3577 8888877766654 21111222222 255555554422 4789999998876655422222212222333
Q ss_pred CCEEEEEcccCC-----CccCCeEEEEECCCCeEEEcCC
Q psy11771 236 DGAIYCVGGNDG-----TMCMSSGERFNVRRNSWEPIAP 269 (347)
Q Consensus 236 ~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~ 269 (347)
+++..++++... ......++.+|..+.+...+..
T Consensus 431 DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~ 469 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATT 469 (1045)
T ss_dssp TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSC
T ss_pred CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeC
Confidence 666555554432 1123579999999887655543
No 278
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=55.90 E-value=1e+02 Score=26.89 Aligned_cols=64 Identities=11% Similarity=0.155 Sum_probs=34.9
Q ss_pred CCEEEEEcccCCCccCCeEEEEECCCC--eEEEcCC----CCCCCcceEEEEE--CC-EEEEEeccCCCCCccEEEEEeC
Q psy11771 236 DGAIYCVGGNDGTMCMSSGERFNVRRN--SWEPIAP----MLSRRSTHEVVNI--EG-YLLTMGGNDGSSSLNSVEKYDP 306 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~v~~yd~~~~--~W~~~~~----~~~~~~~~~~~~~--~~-~lyv~GG~~~~~~~~~v~~yd~ 306 (347)
++.+++.| .+ ..+..||..+. .+..+.. +.........+.+ ++ .+++.|+.++ .+.+||.
T Consensus 188 ~~~~l~s~-~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~ 256 (447)
T 3dw8_B 188 DYETYLSA-DD-----LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKG-----TIRLCDM 256 (447)
T ss_dssp TSSEEEEE-CS-----SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEe-CC-----CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCC-----eEEEEEC
Confidence 55666665 32 57888998732 2332211 1111222333444 34 6777787643 5889998
Q ss_pred CCCc
Q psy11771 307 KLNK 310 (347)
Q Consensus 307 ~~~~ 310 (347)
.+.+
T Consensus 257 ~~~~ 260 (447)
T 3dw8_B 257 RASA 260 (447)
T ss_dssp TTCS
T ss_pred cCCc
Confidence 7765
No 279
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=55.55 E-value=1.9e+02 Score=29.89 Aligned_cols=117 Identities=9% Similarity=0.069 Sum_probs=70.5
Q ss_pred cceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcce-EEEEE
Q psy11771 204 QASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTH-EVVNI 282 (347)
Q Consensus 204 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~-~~~~~ 282 (347)
...+..|+....+.+.+..-+..-...+++.++|+|.+.-| +++..||...++.-....-..+.... ...+.
T Consensus 863 ~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~ 935 (1158)
T 3ei3_A 863 QGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNNIMALYLKTK 935 (1158)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCCSCEEEEEEE
T ss_pred ceEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeeccccEEEEEEecc
Confidence 45678888776677766554443345677888998776555 67888888765421110000011111 22244
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCCCcEEEccCCCCCcceeEEEEEcC
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVLET 331 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~r~~~~~~~~~~ 331 (347)
++.|++ |-... .-.+..|++..++-..++.-..+|+--++..++.
T Consensus 936 ~~~I~v-gD~~~---Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~ 980 (1158)
T 3ei3_A 936 GDFILV-GDLMR---SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDD 980 (1158)
T ss_dssp TTEEEE-EESSB---CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEET
T ss_pred CCEEEE-EEhhh---eEEEEEEEcCCCeEEEEEeecccccEEEEEEEcc
Confidence 666554 44221 2357789999999999998778887666666543
No 280
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=54.79 E-value=1.3e+02 Score=27.54 Aligned_cols=102 Identities=17% Similarity=0.166 Sum_probs=52.7
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCCeEEEc
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI 267 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 267 (347)
+++.++.++.+ ..+..||.....-..+...... -.+++. -++++.+.|+.+ ..+..||.....-..+
T Consensus 437 d~~~l~~~~~d-----~~v~~w~~~~~~~~~~~~~~~~--v~~~~~spd~~~las~~~d-----~~i~iw~~~~~~~~~~ 504 (577)
T 2ymu_A 437 DDQTIASASDD-----KTVKLWNRNGQLLQTLTGHSSS--VRGVAFSPDGQTIASASDD-----KTVKLWNRNGQLLQTL 504 (577)
T ss_dssp TSSEEEEEETT-----SEEEEEETTSCEEEEEECCSSC--EEEEEECTTSCEEEEEETT-----SEEEEEETTSCEEEEE
T ss_pred CCCEEEEEcCC-----CEEEEEECCCCEEEEEcCCCCC--EEEEEEcCCCCEEEEEeCC-----CEEEEEcCCCCEEEEE
Confidence 45555655533 4577888765544443322211 122222 367777777654 4677888654433332
Q ss_pred CCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 268 APMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 268 ~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
..-. .....+.+ ++++++.|+.+ ..+.+||.....
T Consensus 505 ~~h~---~~v~~l~~s~dg~~l~s~~~d-----g~v~lwd~~~~~ 541 (577)
T 2ymu_A 505 TGHS---SSVRGVAFSPDGQTIASASDD-----KTVKLWNRNGQL 541 (577)
T ss_dssp ECCS---SCEEEEEECTTSSCEEEEETT-----SEEEEECTTSCE
T ss_pred eCCC---CCEEEEEEcCCCCEEEEEECc-----CEEEEEeCCCCE
Confidence 2111 11223333 67777777754 358888865443
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=54.17 E-value=1.1e+02 Score=26.49 Aligned_cols=145 Identities=12% Similarity=0.017 Sum_probs=81.3
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC--CCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCP--AMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++.||+.-.. .+.++++++....-..+. .+..| .+++.. ++.||+..-.. ...++++++....
T Consensus 126 ~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~ 193 (349)
T 3v64_C 126 VHDKLYWTDSG-----TSRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSG 193 (349)
T ss_dssp TTTEEEEEETT-----TTEEEEEETTSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCS
T ss_pred CCCeEEEEcCC-----CCeEEEEcCCCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCC
Confidence 47899988442 257888888765433321 22222 234443 68999885321 3679999987654
Q ss_pred EEecCCCCCCCcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCC
Q psy11771 217 WAPVPSMSSRRSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDG 294 (347)
Q Consensus 217 W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~ 294 (347)
-+.+..- ....-.+++. .+++||+.-.. ...++++|.....-..+..... ..-.++++.++.||+..-.
T Consensus 194 ~~~~~~~-~~~~PnGla~d~~~~~lY~aD~~-----~~~I~~~~~dG~~~~~~~~~~~-~~P~giav~~~~ly~td~~-- 264 (349)
T 3v64_C 194 RRIIADT-HLFWPNGLTIDYAGRRMYWVDAK-----HHVIERANLDGSHRKAVISQGL-PHPFAITVFEDSLYWTDWH-- 264 (349)
T ss_dssp CEESCCS-SCSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSC-SSEEEEEEETTEEEEEETT--
T ss_pred cEEEEEC-CCCCcceEEEeCCCCEEEEEECC-----CCEEEEEeCCCCceEEEEeCCC-CCceEEEEECCEEEEecCC--
Confidence 3333221 1111234444 26899998432 2689999987533222221111 1224566678999998642
Q ss_pred CCCccEEEEEeCCCC
Q psy11771 295 SSSLNSVEKYDPKLN 309 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~ 309 (347)
.+.|..+|..+.
T Consensus 265 ---~~~V~~~~~~~G 276 (349)
T 3v64_C 265 ---TKSINSANKFTG 276 (349)
T ss_dssp ---TTEEEEEETTTC
T ss_pred ---CCeEEEEEccCC
Confidence 246788875443
No 282
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=53.55 E-value=1.7e+02 Score=28.59 Aligned_cols=159 Identities=11% Similarity=0.105 Sum_probs=85.1
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCc---cceEEEEE----CCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRR---RYCRIAVV----ENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r---~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
+.+|+.+. ...+++=+-.-.+|+++..++... .......+ .+.+|+.....+ .+++-+=.-.
T Consensus 146 ~~v~a~~~------~~~l~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-----~v~~S~DgG~ 214 (763)
T 3a0f_A 146 DELWFGSR------TQGLWRSTDRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-----GLWVTWDGGA 214 (763)
T ss_dssp TCEEEECS------SSCEEEESSTTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-----CEEEESSSSS
T ss_pred CEEEEEeC------CCcEEEECCCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-----eEEEECCCCC
Confidence 56776532 134555444567899987665421 22222232 346887654211 3444333346
Q ss_pred cEEecCCCCC--------------------CCcceEEEEE-CCEEEEEcccCC---CccCCeEEEEECCCCeEEEcCCCC
Q psy11771 216 KWAPVPSMSS--------------------RRSSCGVAAL-DGAIYCVGGNDG---TMCMSSGERFNVRRNSWEPIAPML 271 (347)
Q Consensus 216 ~W~~~~~~p~--------------------~r~~~~~~~~-~~~iyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~~ 271 (347)
+|+.+...|. +...+.++.. ++.+|+...... ......+++.+-...+|+.+.+.+
T Consensus 215 tW~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~ 294 (763)
T 3a0f_A 215 NWSQVGGQPTQWSDWTKSIVAASGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSR 294 (763)
T ss_dssp SCEECTTCCCSCCHHHHHHHHHHCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTS
T ss_pred CccccCCCccccccccccccccccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCC
Confidence 8999876552 2333333332 678888843210 011257889998999999998655
Q ss_pred CCC-c-------------ceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 272 SRR-S-------------THEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 272 ~~~-~-------------~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
..- . ++..+.+ .+.||+.+.... ....+++=.-.-.+|+.+
T Consensus 295 ~~~~~~~~~~~~~~~~~gg~~~i~v~~~~~v~~~~~~~~--~~~~l~~S~DgG~tW~~~ 351 (763)
T 3a0f_A 295 EGANTYPAPTGNKKVVPGGWNGISVGNGDTVVVSTLDAN--GEDSVYLSRDAGNSWKDL 351 (763)
T ss_dssp SSSCEESCCCCCTTSCCCEEEEEEECSTBCEEEEEESCT--TSCCEEEESBTTSSEEEH
T ss_pred CCCccccccccccccccCCceeEEEcCCCeEEEEecCCC--CCCCEEEECCCCCCcccC
Confidence 421 1 2223333 367887765211 112344434456789988
No 283
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=53.27 E-value=1.2e+02 Score=26.61 Aligned_cols=68 Identities=9% Similarity=0.108 Sum_probs=39.2
Q ss_pred CCEEEEEcccCC----CccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CCE--EEEEeccCCCCCccEEEEEeCCC
Q psy11771 236 DGAIYCVGGNDG----TMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EGY--LLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 236 ~~~iyv~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~~--lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++++|+...... ....++++++|..+.+- +..++.+...++++.. +++ +|+..+. .+++.+||..+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~ViD~~t 350 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAG-----TEVLHIYDAGA 350 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCC-----CCeEEEEECCC
Confidence 478999754211 11346899999987653 3333444333444444 555 5554322 25799999887
Q ss_pred Cc
Q psy11771 309 NK 310 (347)
Q Consensus 309 ~~ 310 (347)
.+
T Consensus 351 ~~ 352 (373)
T 2mad_H 351 GD 352 (373)
T ss_pred CC
Confidence 54
No 284
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=51.59 E-value=1.8e+02 Score=28.26 Aligned_cols=188 Identities=17% Similarity=0.194 Sum_probs=99.3
Q ss_pred CEEEEEcccCC--CCC-CCeEEEEeCCCCcEEeCCC-C------CCCccceEEEEE---CCEEEEEcCcCCCCccceEEE
Q psy11771 143 GLLYACGGYDG--ASC-LSSMERYDPLTGVWSSCPA-M------TTRRRYCRIAVV---ENCLYALGGFDSTNYQASVER 209 (347)
Q Consensus 143 ~~lyv~GG~~~--~~~-~~~~~~~d~~~~~W~~~~~-~------~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~ 209 (347)
+.||+..|... ... ...+++=+-.-++|+++.. . +.....+.++.. .+.+|+.... + ..+++
T Consensus 85 ~~v~v~~~~~~~~~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~-g----~gl~~ 159 (737)
T 2cn3_A 85 NRVYIVAGMYTNDWLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC-G----NGLWR 159 (737)
T ss_dssp TCEEEEECSCSSSSSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST-T----CCEEE
T ss_pred CEEEEEecccccccccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc-C----CcEEE
Confidence 57888765311 111 1345555555678987642 1 111112334432 2567774311 0 23444
Q ss_pred EeCCCCcEEecCCCCCCC--------------cceEEEEEC----------CEEEEEcccCCCccCCeEEEEECCCCeEE
Q psy11771 210 LDPRMGKWAPVPSMSSRR--------------SSCGVAALD----------GAIYCVGGNDGTMCMSSGERFNVRRNSWE 265 (347)
Q Consensus 210 yd~~~~~W~~~~~~p~~r--------------~~~~~~~~~----------~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 265 (347)
=+=.-.+|+.+..+|..- .....+.++ +.||+.-+... ..+++=.-.-.+|+
T Consensus 160 S~DgG~tW~~~~~~~~~~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~----~~v~~S~DgG~tW~ 235 (737)
T 2cn3_A 160 STDYGVTWSKVESFPNPGTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKN----ESIYRSTDGGVTWK 235 (737)
T ss_dssp ESSTTSSCEECTTCCCCCCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSS----CCEEEESSTTSCCE
T ss_pred eCCCCcceecccCCCCCcccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCC----ccEEEEcCCCCceE
Confidence 333346899987665321 112223332 26777532111 23444333456799
Q ss_pred EcCCCCCCCcceEEEEE-CCEEEEEeccCC----CCCccEEEEEeCCCCcEEEccCCCCC----cceeEEEEEcCCCcce
Q psy11771 266 PIAPMLSRRSTHEVVNI-EGYLLTMGGNDG----SSSLNSVEKYDPKLNKWQLLTPMLTR----RSSIGAAVLETLNIEK 336 (347)
Q Consensus 266 ~~~~~~~~~~~~~~~~~-~~~lyv~GG~~~----~~~~~~v~~yd~~~~~W~~~~~~~~~----r~~~~~~~~~~~~~~~ 336 (347)
.+..+|...+.+.++.. ++.+|+..+... ......+++++....+|+.+...|.. +++.+...++..+ +.
T Consensus 236 ~~~~~p~~~~~~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~-~~ 314 (737)
T 2cn3_A 236 AVPGQPKGLLPHHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFCFAGLAVDRQN-PD 314 (737)
T ss_dssp ECTTCCCSSEEEEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSEEEEEEECTTC-TT
T ss_pred ECCCCCCcccceEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCCCCCCcccccccccEEEcCCC-CC
Confidence 99987776555555433 789998764321 11235799999999999999876542 4455555555332 33
Q ss_pred EEEE
Q psy11771 337 RLLV 340 (347)
Q Consensus 337 ~~~~ 340 (347)
.+++
T Consensus 315 ~ly~ 318 (737)
T 2cn3_A 315 IIMV 318 (737)
T ss_dssp CEEE
T ss_pred EEEE
Confidence 4444
No 285
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=51.43 E-value=1.9e+02 Score=28.51 Aligned_cols=143 Identities=10% Similarity=0.010 Sum_probs=81.1
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC--CCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCP--AMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.+++||+.-. ....++++++....-+.+. .+..| .++++. ++.||+.--. ....++++++....
T Consensus 481 ~~~~LY~tD~-----~~~~I~v~~ldG~~~~~l~~~~l~~P---~gIaVDp~~g~LYwtD~g----~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 481 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 548 (791)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS----SSCEEEEEETTSCC
T ss_pred cCCcEEEEec-----CCCeEEEEeCCCCeEEEEEeCCCCCc---ceEEEecCCCCEEEecCC----CCCeEEEEecCCCc
Confidence 4678888743 2357888888766544432 22222 234443 6899997411 12578899887654
Q ss_pred EEecCC--CCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEc-CCCCCCCcceEEEEECCEEEEEec
Q psy11771 217 WAPVPS--MSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI-APMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 217 W~~~~~--~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~-~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
-..+.. +..| .++++- +++||++-.. ...|+++|+....=..+ .....-....++++.+++||+.--
T Consensus 549 ~~~lv~~~l~~P---~GLavD~~~~~LYwaD~~-----~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~ 620 (791)
T 3m0c_C 549 IYSLVTENIQWP---NGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 620 (791)
T ss_dssp EEEEECSSCSCE---EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEET
T ss_pred eEEEEeCCCCCc---eEEEEecCCCeEEEEeCC-----CCcEEEEecCCCceEEEecCCCccCCCCEEEEeCCEEEEEEC
Confidence 433322 2222 233433 6899998432 36899999865432333 221111123466677999999864
Q ss_pred cCCCCCccEEEEEeCCC
Q psy11771 292 NDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~ 308 (347)
. .+.|+..|..+
T Consensus 621 ~-----~~~I~~~dk~t 632 (791)
T 3m0c_C 621 I-----NEAIFSANRLT 632 (791)
T ss_dssp T-----TTEEEEEETTT
T ss_pred C-----CCEEEEEeCCC
Confidence 3 24566666543
No 286
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=51.14 E-value=1.8e+02 Score=28.23 Aligned_cols=150 Identities=10% Similarity=0.015 Sum_probs=76.5
Q ss_pred CCeEEEEeCCCC--cE--EeCCCCCCCccceEEE-EECCEEEEEcCcCCCCccceEEEEeCCC-CcEEe-cCCCCCCCcc
Q psy11771 157 LSSMERYDPLTG--VW--SSCPAMTTRRRYCRIA-VVENCLYALGGFDSTNYQASVERLDPRM-GKWAP-VPSMSSRRSS 229 (347)
Q Consensus 157 ~~~~~~~d~~~~--~W--~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~yd~~~-~~W~~-~~~~p~~r~~ 229 (347)
.++++.+|..+. .+ +.+.+-.. ...++.. ..++.+|+....+ ......++.+|..+ ..|+. +-+-......
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l 371 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFM 371 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEE
Confidence 356888888764 45 55432211 1122333 3377888886543 11235788999876 67876 4221222222
Q ss_pred eEEEEECCEEEEEcccCCCccCCeEEEEEC-------CCCe-EEEcCCCCCCCcceEEE-----EEC-CEEEEE-eccCC
Q psy11771 230 CGVAALDGAIYCVGGNDGTMCMSSGERFNV-------RRNS-WEPIAPMLSRRSTHEVV-----NIE-GYLLTM-GGNDG 294 (347)
Q Consensus 230 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~-------~~~~-W~~~~~~~~~~~~~~~~-----~~~-~~lyv~-GG~~~ 294 (347)
......++.|++....++ ...++.+|+ .+.+ -..+. ++......... ..+ +.+++. ...
T Consensus 372 ~~~~~~~~~lv~~~~~~g---~~~l~~~dl~~~~~~~~~g~~~~~l~-l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~-- 445 (751)
T 2xe4_A 372 ESIAVRSNYLVVAGRRAG---LTRIWTMMADSQDGVFKAGTGLREVV-MEEPIFTVHLVESQMLEYEEPTFRMEYSSL-- 445 (751)
T ss_dssp EEEEECSSEEEEEEEETT---EEEEEEEECCTTTSCCCTTTCCEECC-CCCSSCEEEECGGGCCCTTCSCEEEEEEET--
T ss_pred EEEEEECCEEEEEEEeCC---EEEEEEEecccccccccCCccceEEC-CCCceeEEEeccCcccCCCCCEEEEEEeCC--
Confidence 333445677777654332 257888886 3333 33432 22221111110 122 333333 222
Q ss_pred CCCccEEEEEeCCCCcEEEcc
Q psy11771 295 SSSLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 295 ~~~~~~v~~yd~~~~~W~~~~ 315 (347)
..-..++.||..+++.+.+.
T Consensus 446 -~~P~~~~~~d~~~~~~~~l~ 465 (751)
T 2xe4_A 446 -ATPNTWFDVSPQDHSRTAVK 465 (751)
T ss_dssp -TEEEEEEEECTTTCCEEEEE
T ss_pred -CCCCEEEEEECCCCcEEEEe
Confidence 12346899999888877665
No 287
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=50.42 E-value=2e+02 Score=28.61 Aligned_cols=23 Identities=26% Similarity=0.391 Sum_probs=16.3
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGV 169 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 169 (347)
++.+++.|+.+ ..+..+|..+..
T Consensus 446 dg~~laSgs~D-----gtVrlWd~~~g~ 468 (902)
T 2oaj_A 446 YGTAFITGHSN-----GSVRIYDASHGD 468 (902)
T ss_dssp EEEEEEEEETT-----SEEEEEESSCCT
T ss_pred cCcEEEEecCC-----CcEEEEECCCcc
Confidence 46788888865 457788877664
No 288
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=50.05 E-value=59 Score=28.96 Aligned_cols=70 Identities=6% Similarity=-0.042 Sum_probs=42.0
Q ss_pred CCEEEEEcccC----CCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-CC--EEEEEeccCCCCCccEEEEEeCCC
Q psy11771 236 DGAIYCVGGND----GTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-EG--YLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 236 ~~~iyv~GG~~----~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~~--~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++++|+.-+.. .....+.++++|.++.+-.. .++.+..-.+++.- ++ .||+..+. .+++.+||..+
T Consensus 291 ~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~--~i~vg~~~~~lavs~D~~~~ly~tn~~-----~~~VsViD~~t 363 (386)
T 3sjl_D 291 LDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLA--KFEMGHEIDSINVSQDEKPLLYALSTG-----DKTLYIHDAES 363 (386)
T ss_dssp TTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEE--EEEEEEEECEEEECSSSSCEEEEEETT-----TTEEEEEETTT
T ss_pred CCeEEEEeccccccccCCCCCEEEEEECCCCeEEE--EEECCCCcceEEECCCCCeEEEEEcCC-----CCeEEEEECCC
Confidence 57999974311 11234689999999876433 33333333344443 54 47776543 35799999998
Q ss_pred CcEE
Q psy11771 309 NKWQ 312 (347)
Q Consensus 309 ~~W~ 312 (347)
.+-.
T Consensus 364 ~k~~ 367 (386)
T 3sjl_D 364 GEEL 367 (386)
T ss_dssp CCEE
T ss_pred CcEE
Confidence 8643
No 289
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=49.04 E-value=1.2e+02 Score=26.39 Aligned_cols=26 Identities=8% Similarity=0.032 Sum_probs=18.1
Q ss_pred CCEEEEEcccCCCccCCeEEEEECCCCeEEE
Q psy11771 236 DGAIYCVGGNDGTMCMSSGERFNVRRNSWEP 266 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~ 266 (347)
++..++.|+.+ ..+..||..+.+-..
T Consensus 353 ~~~~l~s~s~d-----g~v~iwd~~~~~~~~ 378 (447)
T 3dw8_B 353 SDSVVMTGSYN-----NFFRMFDRNTKRDIT 378 (447)
T ss_dssp TSSEEEEECST-----TEEEEEETTTCCEEE
T ss_pred CCCEEEEeccC-----CEEEEEEcCCCccee
Confidence 55656777754 578889998876544
No 290
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=48.83 E-value=1.4e+02 Score=26.21 Aligned_cols=130 Identities=10% Similarity=0.041 Sum_probs=71.5
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEecC--CCCCCCcceEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAPVP--SMSSRRSSCGVA 233 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~--~~p~~r~~~~~~ 233 (347)
+.+.++++.......+... .....+++.. ++.||+.--. ...++++++.....+.+. .+..+ .+++
T Consensus 96 ~~I~~i~~~~~~~~~~~~~--~~~~~gl~~d~~~~~ly~~D~~-----~~~I~r~~~~g~~~~~~~~~~~~~p---~gla 165 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLNN--LENAIALDFHHRRELVFWSDVT-----LDRILRANLNGSNVEEVVSTGLESP---GGLA 165 (386)
T ss_dssp SCEEEECTTSCCCEEEECS--CSCEEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCEEEEECSSCSCC---CCEE
T ss_pred ccceeeccCCCcEEEEecC--CCccEEEEEecCCCeEEEEeCC-----CCcEEEEecCCCCcEEEEeCCCCCc---cEEE
Confidence 4578888877665544321 1223344443 6799998432 367999999887665542 22222 2233
Q ss_pred E--ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcC--CCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCC
Q psy11771 234 A--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA--PMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPK 307 (347)
Q Consensus 234 ~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~ 307 (347)
+ .++.||+.-... ..++++++....-..+. .+..| .++++- ++.||+.--.. ...|+++++.
T Consensus 166 vd~~~g~lY~~d~~~-----~~I~~~~~dg~~~~~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~d 233 (386)
T 3v65_B 166 VDWVHDKLYWTDSGT-----SRIEVANLDGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMD 233 (386)
T ss_dssp EETTTTEEEEEETTT-----TEEEECBTTSCSCEEEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETT
T ss_pred EEeCCCeEEEEcCCC-----CeEEEEeCCCCceEEeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCC
Confidence 3 378999885432 57888887654322221 22222 223333 57788764211 2457777765
Q ss_pred CC
Q psy11771 308 LN 309 (347)
Q Consensus 308 ~~ 309 (347)
..
T Consensus 234 G~ 235 (386)
T 3v65_B 234 GS 235 (386)
T ss_dssp SC
T ss_pred CC
Confidence 43
No 291
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=47.55 E-value=72 Score=28.81 Aligned_cols=114 Identities=9% Similarity=-0.124 Sum_probs=60.9
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCC----CCccceEEEEeCCCCc
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDS----TNYQASVERLDPRMGK 216 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~----~~~~~~~~~yd~~~~~ 216 (347)
..+||.-....... +.+.++|+.+++-. ..++..... .++.. +.++||.--... ....+.+..+|+.+.+
T Consensus 85 ~~vyV~n~~~~~~~-~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 85 RRVYIQDPAHFAAI-TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp TEEEEEECTTTCSS-EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CEEEEECCCcCCCC-CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 57888865322111 67999999887642 233322222 33332 457888742100 0123679999999876
Q ss_pred EEecCCCC-CC-----CcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeE
Q psy11771 217 WAPVPSMS-SR-----RSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSW 264 (347)
Q Consensus 217 W~~~~~~p-~~-----r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 264 (347)
-..--+++ .. ..-+.++. -++.+|+..-. ..+.+.++|..+.+=
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 43211111 11 11122232 24578886421 126799999988764
No 292
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=47.27 E-value=1.6e+02 Score=26.33 Aligned_cols=177 Identities=11% Similarity=-0.057 Sum_probs=0.0
Q ss_pred CCCeEEEEEEEEECCEEEE---EcccCCCCCCCeEEEEeCCCC------------cEEeCCCCCCCccceEEEEECCEEE
Q psy11771 129 MLPYVFAIGTCSFDGLLYA---CGGYDGASCLSSMERYDPLTG------------VWSSCPAMTTRRRYCRIAVVENCLY 193 (347)
Q Consensus 129 ~~~~~~~~~~~~~~~~lyv---~GG~~~~~~~~~~~~~d~~~~------------~W~~~~~~~~~r~~~~~~~~~~~ly 193 (347)
....+..++...-+..|++ .|+.+ ..+.+||..+. ..........+-...+....++.++
T Consensus 91 ~~~~v~~l~~spdg~~lav~~~sgs~d-----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 91 MKFPIHHLALSCDNLTLSACMMSSEYG-----SIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp CSSCEEEEEECTTSCEEEEEEEETTTE-----EEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCCcccEEEEcCCCCEEEEEEeccCCC-----ceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEE
Q ss_pred EEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCC
Q psy11771 194 ALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSR 273 (347)
Q Consensus 194 v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~ 273 (347)
+.|+.+ ..+..||..+..-.....-...........-+++..+.|+.+ ..+..||+....-..+......
T Consensus 166 as~s~D-----g~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~~~~~~~~~~~~~~ 235 (434)
T 2oit_A 166 AVCLAD-----GSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPTLQEKKVIPCPPFY 235 (434)
T ss_dssp EEEETT-----SCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETT-----SCEEEECTTCCEEEEECCCTTC
T ss_pred EEEECC-----CeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCC-----CcEEEEccCCcccccccCCccc
Q ss_pred C-----cceEEEEECCEEEE---EeccCCCCCccEEEEEeCCCC------cEEEccCCCCC
Q psy11771 274 R-----STHEVVNIEGYLLT---MGGNDGSSSLNSVEKYDPKLN------KWQLLTPMLTR 320 (347)
Q Consensus 274 ~-----~~~~~~~~~~~lyv---~GG~~~~~~~~~v~~yd~~~~------~W~~~~~~~~~ 320 (347)
. ...++....+..|+ ..|.........+.+||..+. .|........+
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~ 296 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYG 296 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCC
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCC
No 293
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=47.08 E-value=15 Score=25.88 Aligned_cols=47 Identities=15% Similarity=0.099 Sum_probs=38.5
Q ss_pred ChHHHHHHHHHHHHhc-cccccccccCCCChHHHHHhcccccccccChhH
Q psy11771 48 SSCGNYILPTAWVSVA-LQLLRHVKLPLLARDFLMNSVESESLIKESTEC 96 (347)
Q Consensus 48 ~E~~v~~~~~~Wv~~~-~~ll~~vr~~~l~~~~l~~~l~~~~l~~~~~~~ 96 (347)
+-.++.+++.+++..+ .++.+.-.|..++.+.|...++++ +.+..+.
T Consensus 24 ~~~~L~~~a~~fi~~nF~~v~~~~eFl~L~~~~L~~lL~sd--v~~E~~v 71 (105)
T 2eqx_A 24 SDPELYTAAKHCAKTHLAQLQNTEEFLHLPHRLLTDIISDG--VPCSQNP 71 (105)
T ss_dssp TCHHHHHHHHHHHHHTCHHHHTSHHHHHSCHHHHHHHHHTC--EETTSCH
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcccHhhCCHHHHHHHHcCC--CCCHHHH
Confidence 3457788888999888 888899999999999999999987 5444443
No 294
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=45.62 E-value=2e+02 Score=27.20 Aligned_cols=61 Identities=10% Similarity=-0.037 Sum_probs=33.4
Q ss_pred eEEEEECCCCeE-EEcCCCCC---CCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcEEEc
Q psy11771 253 SGERFNVRRNSW-EPIAPMLS---RRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLL 314 (347)
Q Consensus 253 ~v~~yd~~~~~W-~~~~~~~~---~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~ 314 (347)
+++.+|..+.+- ..+..... .......+.+ +++++++....+ .....++.+|..+.+...+
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCcceEE
Confidence 788899887762 44432111 0112223333 777665553322 2235789999988776543
No 295
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=45.38 E-value=1.5e+02 Score=25.78 Aligned_cols=68 Identities=13% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCEEEEEcCcCCC----CccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECCE--EEEEcccCCCccCCeEEEEECCC
Q psy11771 189 ENCLYALGGFDST----NYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDGA--IYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 189 ~~~lyv~GG~~~~----~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~--iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
++++||....... ...++++++|+.+.+- +..++.+....+++. -+++ +|+..+.+ +++.++|..+
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~v--v~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~-----~~V~ViD~~t 350 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQT--SSQISLGHDVDAISVAQDGGPDLYALSAGT-----EVLHIYDAGA 350 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEE--EEEEECCCCcCeEEECCCCCeEEEEEcCCC-----CeEEEEECCC
Confidence 5789997542111 2347899999987654 222232222233333 3444 55544222 6899999987
Q ss_pred Ce
Q psy11771 262 NS 263 (347)
Q Consensus 262 ~~ 263 (347)
.+
T Consensus 351 ~~ 352 (373)
T 2mad_H 351 GD 352 (373)
T ss_pred CC
Confidence 54
No 296
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=43.87 E-value=1.3e+02 Score=24.63 Aligned_cols=106 Identities=13% Similarity=0.166 Sum_probs=54.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCC--cEEeCCCCCCCccceE-EEEE---CCEEEEEcCcCCCCccceEEEEeCCCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTG--VWSSCPAMTTRRRYCR-IAVV---ENCLYALGGFDSTNYQASVERLDPRMG 215 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~--~W~~~~~~~~~r~~~~-~~~~---~~~lyv~GG~~~~~~~~~~~~yd~~~~ 215 (347)
++.+++.|+.+ ..+.+||..+. .++....+........ ++.. ++.+++.|+.+ ..+..||..+.
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d-----g~v~vwd~~~~ 91 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD-----KTVKLWEEDPD 91 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT-----SCEEEEEECTT
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC-----CeEEEEecCCC
Confidence 56667777754 35667776643 3443332222222222 2222 26666777654 45777777653
Q ss_pred -------cEEecCCCCCCCcceEEEEE--C--CEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 216 -------KWAPVPSMSSRRSSCGVAAL--D--GAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 216 -------~W~~~~~~p~~r~~~~~~~~--~--~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
.|..+..+.........+.+ + +.+++.|+.+ ..+..||..+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d-----g~v~iwd~~~~ 144 (351)
T 3f3f_A 92 QEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND-----GILRLYDALEP 144 (351)
T ss_dssp SCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT-----CEEEEEECSST
T ss_pred cccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC-----CcEEEecCCCh
Confidence 34443332222222222333 3 5666666654 47888887654
No 297
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=42.44 E-value=2.5e+02 Score=27.27 Aligned_cols=148 Identities=7% Similarity=-0.032 Sum_probs=80.5
Q ss_pred CeEEEEeCCC--CcEEeCCCCCCCccceEEEEECCEEEEEcCcCC-----CCccceEEEEeCCC--------CcEEe-cC
Q psy11771 158 SSMERYDPLT--GVWSSCPAMTTRRRYCRIAVVENCLYALGGFDS-----TNYQASVERLDPRM--------GKWAP-VP 221 (347)
Q Consensus 158 ~~~~~~d~~~--~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~-----~~~~~~~~~yd~~~--------~~W~~-~~ 221 (347)
+.++..|... ..|.++ ..|. ...-+...++++|+....+- ......+...|..+ ..|+. ++
T Consensus 269 ~~~~~~~~~~~~~~~~~l-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 345 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKI-NMPS--DATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFT 345 (711)
T ss_dssp EEEEEEECSSSSCEEEEC-CSCT--TCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEEC
T ss_pred eeEEEEcCCCCCCcceEe-ecCC--cceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEEC
Confidence 5567777553 567776 2332 22124567999999764321 11345677787654 46886 44
Q ss_pred CCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEc--CCCCCCCcceEEEEE---CCEEEEE-eccCCC
Q psy11771 222 SMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPI--APMLSRRSTHEVVNI---EGYLLTM-GGNDGS 295 (347)
Q Consensus 222 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~--~~~~~~~~~~~~~~~---~~~lyv~-GG~~~~ 295 (347)
+-+ .+.-......++.|++..-.+. ...++.+|+.++.|... ..+|.. ........ ++.+++. .+..
T Consensus 346 ~~~-~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~~~~~i~lp~~-~~~~~~~~~~~~~~~~~~~ss~~-- 418 (711)
T 4hvt_A 346 PTA-NEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWTKPVVLKLPYQ-NAIFGMSSYEEEEEALITIENSI-- 418 (711)
T ss_dssp CCT-TEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEECCCEEECCCST-TCEEEEECCTTCSCEEEEEECSS--
T ss_pred CCC-CCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceEEEeccCCCCC-eEEEEEeecCcCCEEEEEEecCC--
Confidence 422 2233344455677776543222 24688899888888432 234432 12222222 2344443 3332
Q ss_pred CCccEEEEEeCCCCcEEEccCC
Q psy11771 296 SSLNSVEKYDPKLNKWQLLTPM 317 (347)
Q Consensus 296 ~~~~~v~~yd~~~~~W~~~~~~ 317 (347)
.-..++.||.. .+++.+...
T Consensus 419 -~P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 419 -VPPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp -SCCEEEEECTT-SCEEEEECC
T ss_pred -CCCEEEEEeCC-CcEEEEecC
Confidence 23579999988 778777543
No 298
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=41.86 E-value=1.9e+02 Score=25.85 Aligned_cols=143 Identities=10% Similarity=0.066 Sum_probs=73.0
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE-ECCEEEEEcCcCCCCccceEEEEeCCCCc-E-Ee
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV-VENCLYALGGFDSTNYQASVERLDPRMGK-W-AP 219 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W-~~ 219 (347)
+.||+.-.. +.+.++|+.+++...+... . ....+++. .++.||+..-.... ....+..++..... + ..
T Consensus 153 g~Lyv~D~~------~~I~~id~~~g~v~~~~~~-~-~~P~giavd~dG~lyVad~~~~~-~~~gv~~~~~~~~~~~~~~ 223 (433)
T 4hw6_A 153 DDLYWVGQR------DAFRHVDFVNQYVDIKTTN-I-GQCADVNFTLNGDMVVVDDQSSD-TNTGIYLFTRASGFTERLS 223 (433)
T ss_dssp CEEEEECBT------SCEEEEETTTTEEEEECCC-C-SCEEEEEECTTCCEEEEECCSCT-TSEEEEEECGGGTTCCEEE
T ss_pred CEEEEEeCC------CCEEEEECCCCEEEEeecC-C-CCccEEEECCCCCEEEEcCCCCc-ccceEEEEECCCCeecccc
Confidence 889988431 6799999988887665431 1 11223333 24569988532211 12335555553221 1 12
Q ss_pred cCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeE-EEcCCCCCCCcceEEEEE-C-CEEEEEeccCC
Q psy11771 220 VPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSW-EPIAPMLSRRSTHEVVNI-E-GYLLTMGGNDG 294 (347)
Q Consensus 220 ~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~ 294 (347)
++.+..+ ..+++- ++.||+.-.. ...+++||+.+.+- ..+...........++.- + +.||+.--.
T Consensus 224 ~~~~~~P---~giavd~~~G~lyv~d~~-----~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~-- 293 (433)
T 4hw6_A 224 LCNARGA---KTCAVHPQNGKIYYTRYH-----HAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNG-- 293 (433)
T ss_dssp EEECSSB---CCCEECTTTCCEEECBTT-----CSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETT--
T ss_pred ccccCCC---CEEEEeCCCCeEEEEECC-----CCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCC--
Confidence 2222222 223332 6788886432 25799999986654 222111111111233333 3 459997532
Q ss_pred CCCccEEEEEeCC
Q psy11771 295 SSSLNSVEKYDPK 307 (347)
Q Consensus 295 ~~~~~~v~~yd~~ 307 (347)
.+.|+++|..
T Consensus 294 ---~~~I~~~~~d 303 (433)
T 4hw6_A 294 ---KHCIYRVDYN 303 (433)
T ss_dssp ---TTEEEEEEBC
T ss_pred ---CCEEEEEeCC
Confidence 2478886654
No 299
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=41.13 E-value=1.5e+02 Score=25.06 Aligned_cols=58 Identities=12% Similarity=0.182 Sum_probs=42.4
Q ss_pred EEECCEEEEEcccCCCc--cCCeEEEEEC-CCCeEEEcCCCCCCCcceEEEEECCEEEEEec
Q psy11771 233 AALDGAIYCVGGNDGTM--CMSSGERFNV-RRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 233 ~~~~~~iyv~GG~~~~~--~~~~v~~yd~-~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG 291 (347)
..++|+.+++|-..... ..+.|.-|.- ..++|+.++.+.......=.+.+++.+ |+||
T Consensus 37 F~~~Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~~~~~LqDPF~t~I~gEl-i~GG 97 (315)
T 2b4w_A 37 FSYKGKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELEDPYIAKINNEM-IFGG 97 (315)
T ss_dssp EEETTEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTTCCBSCEEEEEEEETTEE-EEEE
T ss_pred eeECCEEEEEeeeecCCCccccEEEEEEEcCCCceEECCCCEEEecCccEEEECCEE-Eeee
Confidence 35688999988765444 3367777765 789999998855566667778889985 5577
No 300
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=40.84 E-value=1.7e+02 Score=24.94 Aligned_cols=64 Identities=13% Similarity=0.104 Sum_probs=34.4
Q ss_pred CCEEEEEcCcCCCCccce-EEEEeCCCCcEEe-cCCCCCCCcceEEEE-ECCEEEEEcccCCCccCCeEEEEECCCC
Q psy11771 189 ENCLYALGGFDSTNYQAS-VERLDPRMGKWAP-VPSMSSRRSSCGVAA-LDGAIYCVGGNDGTMCMSSGERFNVRRN 262 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~-~~~yd~~~~~W~~-~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~ 262 (347)
++++.+.|+.+ .+ +..||..+.+-.. +..-.....-.+++. -++..++.|+.+ ..+..||..+.
T Consensus 206 ~g~~l~s~s~d-----~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD-----GTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT-----CSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCC-----CCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 56666666643 44 8889988764322 211001111122222 256777777654 57788887644
No 301
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=39.66 E-value=3.2e+02 Score=28.08 Aligned_cols=173 Identities=9% Similarity=0.012 Sum_probs=90.4
Q ss_pred EEEEECCEEEEEcccCCCCCCCeEEEEeCCCCcEE-eCCC----CCCCccceEEEEE---CCEEEEEcCcCCCCccceEE
Q psy11771 137 GTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWS-SCPA----MTTRRRYCRIAVV---ENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 137 ~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~----~~~~r~~~~~~~~---~~~lyv~GG~~~~~~~~~~~ 208 (347)
++....+.+ ++|.-........++.|+.....|- .... ......+++++.. +...+|+|.- .....-.++
T Consensus 338 Sa~~t~d~~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sylGySVa~~~~~g~~~~v~GAP-~~~~~G~V~ 415 (1095)
T 3k6s_A 338 SAVFTPDGP-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQENVDMRDSYLGYSTELALWKGVQSLVLGAP-RYQHTGKAV 415 (1095)
T ss_dssp SEECCTTCC-EEEESCSTTTTBEEEECCSSSCCEEECCCSSCCCCCSCCBTSSEECCCCSSSCEEEEEET-TGGGTCEEE
T ss_pred cceecCCcc-eEcccccCCccceeEEecCCCcceeeccccccccccccccceeeEEeccCCceEEEEEcc-cccccceEE
Confidence 444444444 7776654445556788877655432 2211 2223345555442 2345666642 222345788
Q ss_pred EEeCCCCcEEecCCC----CCCCcceEEEEEC------CEEEEEcccC--CCccCCeEEEEECCC--CeEEEcCCC----
Q psy11771 209 RLDPRMGKWAPVPSM----SSRRSSCGVAALD------GAIYCVGGND--GTMCMSSGERFNVRR--NSWEPIAPM---- 270 (347)
Q Consensus 209 ~yd~~~~~W~~~~~~----p~~r~~~~~~~~~------~~iyv~GG~~--~~~~~~~v~~yd~~~--~~W~~~~~~---- 270 (347)
.|......|+....+ .....+.++++.+ ..|+++|.-. .......+++|.-.. ..|.....+
T Consensus 416 i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~~~~l~g~~ 495 (1095)
T 3k6s_A 416 IFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWCDAVLYGEQ 495 (1095)
T ss_dssp EEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCSCSSCCCCC
T ss_pred EEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceeeeEEeeccc
Confidence 888877778664321 2234455666532 2577777421 112235688875443 457643322
Q ss_pred --CCCCcceEEEEEC-----C--EEEEEeccCCCCCccEEEEEeCCCC-cEE
Q psy11771 271 --LSRRSTHEVVNIE-----G--YLLTMGGNDGSSSLNSVEKYDPKLN-KWQ 312 (347)
Q Consensus 271 --~~~~~~~~~~~~~-----~--~lyv~GG~~~~~~~~~v~~yd~~~~-~W~ 312 (347)
+..+++.+++.++ | .| ++|.-........+++|.-..+ .|.
T Consensus 496 ~~~~~~FG~sva~~gD~NgDG~~Dl-~VGAP~~~~~~G~vyi~~g~~~~g~~ 546 (1095)
T 3k6s_A 496 GHPWGRFGAALTVLGDVNGDKLTDV-VIGAPGEEENRGAVYLFHGVLGPSIS 546 (1095)
T ss_dssp SCSSCCBTSCEEEEECSSSSSCCEE-EEECTTTTTSCCBEEEEEBCSSSCBC
T ss_pred CCccccCccceEeecccCCCCCcCE-EEeCCcCCCCCCEEEEecCCCCCCcc
Confidence 3467777777652 1 35 4453222223456888977665 553
No 302
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=38.98 E-value=1.6e+02 Score=25.32 Aligned_cols=71 Identities=20% Similarity=0.277 Sum_probs=42.6
Q ss_pred CCEEEEEcccCC-----CccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE-C-CEEEEEeccCCCCCccEEEEEeCCC
Q psy11771 236 DGAIYCVGGNDG-----TMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI-E-GYLLTMGGNDGSSSLNSVEKYDPKL 308 (347)
Q Consensus 236 ~~~iyv~GG~~~-----~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~-~-~~lyv~GG~~~~~~~~~v~~yd~~~ 308 (347)
++++|+....++ .....+++++|.++.+ .+..++... ..+++.. + ..||+.++ +.+.+||.++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 478998754211 1123689999998875 444444444 4444444 3 46666542 5789999887
Q ss_pred CcEEEccC
Q psy11771 309 NKWQLLTP 316 (347)
Q Consensus 309 ~~W~~~~~ 316 (347)
.+-+.+..
T Consensus 335 ~~l~~~~~ 342 (361)
T 2oiz_A 335 PEPKLLRT 342 (361)
T ss_dssp SSCEEEEE
T ss_pred CcceeeEE
Confidence 63355443
No 303
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=36.23 E-value=1.3e+02 Score=27.17 Aligned_cols=115 Identities=10% Similarity=-0.127 Sum_probs=60.4
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE--CCEEEEEcccCC----CccCCeEEEEECCCC
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDG----TMCMSSGERFNVRRN 262 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~----~~~~~~v~~yd~~~~ 262 (347)
..++||.-....... +.+.++|+.+.+-. ..++.+... .++.- +..+|+.--... ....+.+.++|+.+.
T Consensus 84 ~~~vyV~n~~~~~~~-~~VsVID~~t~~vv--~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 84 ARRVYIQDPAHFAAI-TQQFVIDGSTGRIL--GMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp TTEEEEEECTTTCSS-EEEEEEETTTTEEE--EEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCEEEEECCCcCCCC-CeEEEEECCCCEEE--EEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 456788754321111 68999999887533 333333333 33332 456888742100 011257999999987
Q ss_pred eEEEcCCCC-CCC-----cceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 263 SWEPIAPML-SRR-----STHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 263 ~W~~~~~~~-~~~-----~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
+-..--+++ ..| .-+.++.. +.++|+..-. ..+.+.++|+.+++=
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~----~~~~VsVID~~t~kv 212 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS----PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----SSCEEEEEETTTTEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----CCCeEEEEECCCCeE
Confidence 643211122 111 12233333 3578886421 135788999888753
No 304
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=35.90 E-value=2.9e+02 Score=26.17 Aligned_cols=164 Identities=7% Similarity=-0.055 Sum_probs=75.9
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEe----CCCCcEEeCCC----CCCCccc-----eEEEEECC-EEEEE-cCcCCCCccc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYD----PLTGVWSSCPA----MTTRRRY-----CRIAVVEN-CLYAL-GGFDSTNYQA 205 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d----~~~~~W~~~~~----~~~~r~~-----~~~~~~~~-~lyv~-GG~~~~~~~~ 205 (347)
.++++++...... .....++.+| ..+.++..+.. -...... .-...-++ .+++. ...++ ..
T Consensus 262 pD~~~~~~~~~~~-~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g---~~ 337 (719)
T 1z68_A 262 TDERVCLQWLKRV-QNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDG---YK 337 (719)
T ss_dssp SSSEEEEEEEESS-TTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTS---CE
T ss_pred CCCeEEEEEeccc-cCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCC---ce
Confidence 3566655532211 1224688889 77766544431 1111111 11122244 45443 22222 36
Q ss_pred eEEEEeCCCCcEEecCCCCCCCcceEEEEECCEEEEEccc-CCCccCCeEEEEECCCC--eEEEcCC-CCCCCcceEEEE
Q psy11771 206 SVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGN-DGTMCMSSGERFNVRRN--SWEPIAP-MLSRRSTHEVVN 281 (347)
Q Consensus 206 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~-~~~~~~~~v~~yd~~~~--~W~~~~~-~~~~~~~~~~~~ 281 (347)
.++.+|..+.+...+..-....... ...-++.||..+.. ........++..+..++ +.+.+.. ++........+.
T Consensus 338 ~l~~~~~~~~~~~~lt~~~~~v~~~-~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~ 416 (719)
T 1z68_A 338 HIHYIKDTVENAIQITSGKWEAINI-FRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTAS 416 (719)
T ss_dssp EEEEESSCSTTCEECSCSSSCEEEE-EEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEE
T ss_pred EEEEEECCCCceEecccCceEEEEE-EEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEE
Confidence 7899999887766665422221111 22234566666543 01112246777777544 3455543 221223333333
Q ss_pred E--CCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 282 I--EGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 282 ~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
+ +++.+++...... ...++.||.++++-
T Consensus 417 ~s~dg~~l~~~~s~~~--~p~~~l~d~~~g~~ 446 (719)
T 1z68_A 417 FSDYAKYYALVCYGPG--IPISTLHDGRTDQE 446 (719)
T ss_dssp ECGGGSSEEEEECCBS--SCEEEEECSSSCCE
T ss_pred ECCCCCEEEEEcCCCC--CCeEEEEECCCCCE
Confidence 3 3443333322221 23588899877764
No 305
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=35.85 E-value=30 Score=29.05 Aligned_cols=46 Identities=7% Similarity=0.075 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhc-cccccccccCCCChHHHHHhcccccccccChh
Q psy11771 50 CGNYILPTAWVSVA-LQLLRHVKLPLLARDFLMNSVESESLIKESTE 95 (347)
Q Consensus 50 ~~v~~~~~~Wv~~~-~~ll~~vr~~~l~~~~l~~~l~~~~l~~~~~~ 95 (347)
.++.+.+.+++..+ .++.+.-.|..++.+.+...++++.+...++.
T Consensus 157 ~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE~ 203 (279)
T 3i3n_A 157 SQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSEE 203 (279)
T ss_dssp HHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCHH
Confidence 35666777788777 88888899999999999999999998766554
No 306
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=34.53 E-value=2.4e+02 Score=24.81 Aligned_cols=144 Identities=11% Similarity=0.023 Sum_probs=80.3
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCC--CCCCCccceEEEE--ECCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCP--AMTTRRRYCRIAV--VENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~--~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++.||+.-.. ...++++++....-..+. .+..| .+++. .++.||+.--. ....++++++....
T Consensus 169 ~~~~lY~~d~~-----~~~I~~~~~~g~~~~~l~~~~~~~P---~~iavdp~~g~ly~td~~----~~~~I~~~~~dG~~ 236 (400)
T 3p5b_L 169 IHSNIYWTDSV-----LGTVSVADTKGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG----TPAKIKKGGLNGVD 236 (400)
T ss_dssp TTTEEEEEETT-----TTEEEEECTTTCSEEEEEECSSCCE---EEEEEETTTTEEEEEECS----SSCCEEEEETTSCS
T ss_pred cCCceEEEECC-----CCeEEEEeCCCCceEEEEeCCCCCc---ceEEEecccCeEEEEeCC----CCCEEEEEeCCCCc
Confidence 47888888432 256888888766544332 22222 23444 36899987421 12568888887543
Q ss_pred EEec-C-CCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC-CCCcceEEEEECCEEEEEec
Q psy11771 217 WAPV-P-SMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML-SRRSTHEVVNIEGYLLTMGG 291 (347)
Q Consensus 217 W~~~-~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~-~~~~~~~~~~~~~~lyv~GG 291 (347)
=..+ . .+.. -.+++.- +++||++-.. ...++++|.....-+.+...+ ....-.++++.++.||+.--
T Consensus 237 ~~~~~~~~l~~---P~glavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~ 308 (400)
T 3p5b_L 237 IYSLVTENIQW---PNGITLDLLSGRLYWVDSK-----LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDI 308 (400)
T ss_dssp CEEEECSSCSC---EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCCCEEEEECSSTTSSEEEEEEETTEEEEEES
T ss_pred cEEEEECCCCc---eEEEEEEeCCCEEEEEECC-----CCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecC
Confidence 2222 1 1222 2334443 6899998432 368999998754333332111 11223466678999999863
Q ss_pred cCCCCCccEEEEEeCCCC
Q psy11771 292 NDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~ 309 (347)
. .+.|+.+|..+.
T Consensus 309 ~-----~~~V~~~~~~~G 321 (400)
T 3p5b_L 309 I-----NEAIFSANRLTG 321 (400)
T ss_dssp S-----SCSEEEEESSSC
T ss_pred C-----CCeEEEEEcCCC
Confidence 2 235777775433
No 307
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=34.32 E-value=3.3e+02 Score=26.45 Aligned_cols=166 Identities=15% Similarity=0.138 Sum_probs=89.2
Q ss_pred CEEEEEcccC-CCCCCCeEEEEeCCCCcEEeCCC-CC-----CCcc-ceEEEEE---CCEEEEEcCcCCCCccceEEEEe
Q psy11771 143 GLLYACGGYD-GASCLSSMERYDPLTGVWSSCPA-MT-----TRRR-YCRIAVV---ENCLYALGGFDSTNYQASVERLD 211 (347)
Q Consensus 143 ~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~~~~~-~~-----~~r~-~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd 211 (347)
+.+|+..|.. .......+++=+-.-.+|+++.. .+ ..|. ...++.. .+.+|+.+- ...+++=+
T Consensus 88 ~~~~~~~g~~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~------~~~l~~S~ 161 (763)
T 3a0f_A 88 DRLYLAQGDYVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSR------TQGLWRST 161 (763)
T ss_dssp TCEEEEECSCTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECS------SSCEEEES
T ss_pred CEEEEEecccccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeC------CCcEEEEC
Confidence 5788866531 11112345555555678988642 11 1121 1234443 367887642 12344433
Q ss_pred CCCCcEEecCCCCCCC---cceEEEEE----CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCC------------
Q psy11771 212 PRMGKWAPVPSMSSRR---SSCGVAAL----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLS------------ 272 (347)
Q Consensus 212 ~~~~~W~~~~~~p~~r---~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~------------ 272 (347)
=.-.+|+.+..++... .....+.+ .+.+|+.....+ .+++=+-.-.+|+.+...+.
T Consensus 162 DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~g-----~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~p 236 (763)
T 3a0f_A 162 DRAQTWSRMNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAVG-----GLWVTWDGGANWSQVGGQPTQWSDWTKSIVAA 236 (763)
T ss_dssp STTSSCEECTTSCCCSCTTTCEEEEEECSSSTTCEEEEESSTT-----CEEEESSSSSSCEECTTCCCSCCHHHHHHHHH
T ss_pred CCCcCccccccCcccCCCccceEEEEECCCCCCEEEEEEeCCC-----eEEEECCCCCCccccCCCcccccccccccccc
Confidence 3457899988766432 22223333 246887643211 34444444568999876552
Q ss_pred --------CCcceEEEEE-CCEEEEEeccCC---CCCccEEEEEeCCCCcEEEccCCCC
Q psy11771 273 --------RRSTHEVVNI-EGYLLTMGGNDG---SSSLNSVEKYDPKLNKWQLLTPMLT 319 (347)
Q Consensus 273 --------~~~~~~~~~~-~~~lyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~~~ 319 (347)
+.+.+.++.. ++.||+...... ......++.++-...+|+.+.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~g~v~rS~D~G~tW~~~~~~~~ 295 (763)
T 3a0f_A 237 SGTAIQSSGPLPIKIALGKNGRLYITYSDAPGPWGVLYGEVWSYDPTNGNWKHITPSRE 295 (763)
T ss_dssp HCCCCSSSSCEEEEEEECTTSCEEEEEESSCSSSCCCCEEEEEEETTTTEEEECCTTSS
T ss_pred ccccccCCCCcceeEEECCCCcEEEEeccCCCCCCCcceeEEEEeCCCCceEECCCCCC
Confidence 2333444333 688998853210 0113468899999999999876543
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=34.07 E-value=4.2e+02 Score=27.45 Aligned_cols=135 Identities=10% Similarity=-0.008 Sum_probs=75.0
Q ss_pred CeEEEEeCCCCcEEeCCCCCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEec--CCCCCCCcceEEEEE
Q psy11771 158 SSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPV--PSMSSRRSSCGVAAL 235 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~~~~~~~~ 235 (347)
..+..|+...++.+.+...+..-.-.+++.++|++.+.=| +.+..|+...++.-.. ...+. .....+.+.
T Consensus 864 Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~~g~Lla~ig-------~~l~vy~l~~~~~L~~~~~~~~~-i~~~~l~~~ 935 (1158)
T 3ei3_A 864 GRIVVFQYSDGKLQTVAEKEVKGAVYSMVEFNGKLLASIN-------STVRLYEWTTEKELRTECNHYNN-IMALYLKTK 935 (1158)
T ss_dssp EEEEEEEEETTEEEEEEEEEESSCEEEEEEETTEEEEEET-------TEEEEEEECTTSCEEEEEEECCC-SCEEEEEEE
T ss_pred eEEEEEEEECCEEEEEEEEEcCCcCEEEeeeCCEEEEEcC-------CEEEEEECCCCceEEEEeecccc-EEEEEEecc
Confidence 4578888766666666544444445567778888766544 6678888775542111 11111 111133355
Q ss_pred CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEeccCCCCCccEEEEEeCC
Q psy11771 236 DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPK 307 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~ 307 (347)
++.|++ |-... .-.+..|+...++-..++.-..+|...++..+++. .++|+.... .--+..|+++
T Consensus 936 ~~~I~v-gD~~~---Sv~~~~y~~~~~~L~~~a~D~~~~~vta~~~ld~~-t~l~aD~~g--Nl~vl~~~~~ 1000 (1158)
T 3ei3_A 936 GDFILV-GDLMR---SVLLLAYKPMEGNFEEIARDFNPNWMSAVEILDDD-NFLGAENAF--NLFVCQKDSA 1000 (1158)
T ss_dssp TTEEEE-EESSB---CEEEEEEETTTTEEEEEEECCSCBCEEEEEEEETT-EEEEEETTS--EEEEEEECTT
T ss_pred CCEEEE-EEhhh---eEEEEEEEcCCCeEEEEEeecccccEEEEEEEccC-cEEEEcCCC--cEEEEecCCC
Confidence 776654 32211 13456799999988888876677776666666433 334432211 1235566663
No 309
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=32.61 E-value=1.6e+02 Score=26.30 Aligned_cols=105 Identities=12% Similarity=0.056 Sum_probs=58.8
Q ss_pred CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCCcceEEEE-ECC-EEEEEcccCCCccCCeEEEEECCCCeEE-
Q psy11771 189 ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAA-LDG-AIYCVGGNDGTMCMSSGERFNVRRNSWE- 265 (347)
Q Consensus 189 ~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~- 265 (347)
++.||+.--. ..+.++|+.+++.+.+.+. ...-..++. -++ .||+....++. ....+..++... .|.
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~~--~~~P~~ia~d~~G~~lyvad~~~~~-~~~~v~~~~~~g-~~~~ 218 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYSG--LSKVRTICWTHEADSMIITNDQNNN-DRPNNYILTRES-GFKV 218 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEECC--CSCEEEEEECTTSSEEEEEECCSCT-TSEEEEEEEGGG-TSCS
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEecC--CCCcceEEEeCCCCEEEEEeCCCCc-ccceEEEEeCCC-ceee
Confidence 4789998431 6789999998887776441 111122332 234 59998653321 123466666543 232
Q ss_pred --EcCCCCCCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcE
Q psy11771 266 --PIAPMLSRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKW 311 (347)
Q Consensus 266 --~~~~~~~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W 311 (347)
.+..+..+ +++++. ++.||+.--. ...+++||+.+..-
T Consensus 219 ~~~l~~~~~p---~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 219 ITELTKGQNC---NGAETHPINGELYFNSWN-----AGQVFRYDFTTQET 260 (430)
T ss_dssp EEEEEECSSC---CCEEECTTTCCEEEEETT-----TTEEEEEETTTTEE
T ss_pred eeeeccCCCc---eEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcE
Confidence 22222222 334443 5788887532 24799999987755
No 310
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=31.26 E-value=2.6e+02 Score=24.32 Aligned_cols=143 Identities=11% Similarity=0.049 Sum_probs=79.7
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC--CCCCccceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPA--MTTRRRYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~--~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.++.||+.-- ....++++++.....+.+.. +..+ ...++...++.||+.-.. ...++++++....-.
T Consensus 126 ~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~~~p-~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~ 194 (386)
T 3v65_B 126 RRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGLESP-GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRK 194 (386)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSCCEEEEECSSCSCC-CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCE
T ss_pred CCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeCCCCCc-cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceE
Confidence 3678888732 23578999988776554322 2222 222222247899998542 257888887654423
Q ss_pred ecC--CCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcC--CCCCCCcceEEEE--ECCEEEEEe
Q psy11771 219 PVP--SMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA--PMLSRRSTHEVVN--IEGYLLTMG 290 (347)
Q Consensus 219 ~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~~~~~~~~~--~~~~lyv~G 290 (347)
.+. .+..| .++++- ++.||+.--.. ...++++++....-+.+. .+..| .+++. .+++||+.-
T Consensus 195 ~l~~~~l~~P---~giavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~~~P---nGlavd~~~~~lY~aD 264 (386)
T 3v65_B 195 VLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHLFWP---NGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEECSSCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSCSCE---EEEEEEGGGTEEEEEE
T ss_pred EeecCCCCCC---cEEEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCCCCe---eeEEEeCCCCEEEEEE
Confidence 221 22222 233443 68899874211 368999998754333332 12111 23333 268999986
Q ss_pred ccCCCCCccEEEEEeCCCC
Q psy11771 291 GNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 291 G~~~~~~~~~v~~yd~~~~ 309 (347)
.. .+.|+++|....
T Consensus 265 ~~-----~~~I~~~d~dG~ 278 (386)
T 3v65_B 265 AK-----HHVIERANLDGS 278 (386)
T ss_dssp TT-----TTEEEEECTTSC
T ss_pred CC-----CCEEEEEeCCCC
Confidence 42 357888887643
No 311
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=30.03 E-value=2.5e+02 Score=23.73 Aligned_cols=144 Identities=10% Similarity=0.017 Sum_probs=80.8
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeC--CCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSC--PAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.++.||+.-.. ...++++++....-+.+ ..+..| .+++.. ++.||+.--. ....++++++....
T Consensus 89 ~~g~ly~~d~~-----~~~I~~~~~dG~~~~~l~~~~~~~P---~giavdp~~g~ly~td~~----~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 89 LGEKLYWTDSE-----TNRIEVSNLDGSLRKVLFWQELDQP---RAIALDPSSGFMYWTDWG----EVPKIERAGMDGSS 156 (318)
T ss_dssp TTTEEEEEETT-----TTEEEEEETTSCSCEEEECSSCSSE---EEEEEEGGGTEEEEEECS----SSCEEEEEETTSCS
T ss_pred CCCeEEEEECC-----CCEEEEEECCCCcEEEEEeCCCCCc---cEEEEeCCCCEEEEEecC----CCCEEEEEEcCCCC
Confidence 47899987432 25788898876543332 222222 233443 6899987421 13678999887433
Q ss_pred EEec-C-CCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEECCEEEEEecc
Q psy11771 217 WAPV-P-SMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 217 W~~~-~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~~~~lyv~GG~ 292 (347)
-+.+ . .+.. -.+++.- +++||+.-.. ...++++|.....-+.+..-. ...-.++++.++.||+.--.
T Consensus 157 ~~~~~~~~l~~---Pnglavd~~~~~lY~aD~~-----~~~I~~~d~dG~~~~~~~~~~-~~~P~glav~~~~lywtd~~ 227 (318)
T 3sov_A 157 RFIIINSEIYW---PNGLTLDYEEQKLYWADAK-----LNFIHKSNLDGTNRQAVVKGS-LPHPFALTLFEDILYWTDWS 227 (318)
T ss_dssp CEEEECSSCSC---EEEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEECSC-CSCEEEEEEETTEEEEEETT
T ss_pred eEEEEECCCCC---ccEEEEeccCCEEEEEECC-----CCEEEEEcCCCCceEEEecCC-CCCceEEEEeCCEEEEEecC
Confidence 2222 1 2221 2344443 6899998432 368999998753333332211 11224566678899997421
Q ss_pred CCCCCccEEEEEeCCCCc
Q psy11771 293 DGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~~~~ 310 (347)
...|.++|+.+.+
T Consensus 228 -----~~~V~~~~~~~G~ 240 (318)
T 3sov_A 228 -----THSILACNKYTGE 240 (318)
T ss_dssp -----TTEEEEEETTTCC
T ss_pred -----CCeEEEEECCCCC
Confidence 2478888885544
No 312
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=29.76 E-value=2e+02 Score=27.20 Aligned_cols=104 Identities=5% Similarity=-0.180 Sum_probs=49.8
Q ss_pred eEEEEeCCCCcEEeCCCCCCC---ccceEEEEECCEEEEEcCcCCC----CccceEEEEeCCCCcEEecCCCCCC--Ccc
Q psy11771 159 SMERYDPLTGVWSSCPAMTTR---RRYCRIAVVENCLYALGGFDST----NYQASVERLDPRMGKWAPVPSMSSR--RSS 229 (347)
Q Consensus 159 ~~~~~d~~~~~W~~~~~~~~~---r~~~~~~~~~~~lyv~GG~~~~----~~~~~~~~yd~~~~~W~~~~~~p~~--r~~ 229 (347)
.++.+|..+++-..+-..... ....-...-+++..+++..... .....++.+|..+.+-..+...... ...
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~ 117 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQ 117 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCS
T ss_pred CEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcccccccc
Confidence 577888777654333221111 1111122235554454433222 2247899999988776555543211 111
Q ss_pred eEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcC
Q psy11771 230 CGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA 268 (347)
Q Consensus 230 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~ 268 (347)
.....-+|+..+++.. ..++.+|..+.+-..+.
T Consensus 118 ~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 118 YAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp BCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred ccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 1122224433333332 36778887766555443
No 313
>3v4v_A Integrin alpha-4; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_A*
Probab=29.44 E-value=2.8e+02 Score=26.20 Aligned_cols=152 Identities=12% Similarity=0.053 Sum_probs=78.9
Q ss_pred cceEEEEECCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCC-----CCCcceEEEEE--C--C-EEEEEcccCCCcc
Q psy11771 181 RYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMS-----SRRSSCGVAAL--D--G-AIYCVGGNDGTMC 250 (347)
Q Consensus 181 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p-----~~r~~~~~~~~--~--~-~iyv~GG~~~~~~ 250 (347)
.++++...++. +++|.-......-.++.|+..+++|....... ......++++- + + .-+++|.-.. ..
T Consensus 167 ~G~Sa~~~~d~-~v~GApG~~~w~G~v~~~~~~~~~~~~~~~~~~~~~~~sy~GySva~gD~ngDG~~DlvvGAP~~-~~ 244 (597)
T 3v4v_A 167 AGISSFYTKDL-IVMGAPGSSYWTGSLFVYNITTNKYKAFLDKQNQVKFGSYLGYSVGAGHFRSQHTTEVVGGAPQH-EQ 244 (597)
T ss_dssp BTSSEEECSSE-EEEEETTHHHHTBEEEEEETTTTBCCBBCCTTCCSCTTCCBTSSEEEECSSCTTSCEEEEEETTG-GG
T ss_pred CceeeEecCCc-eEEccccccccccceEEEEccCceeeecccccccccccCcCccEEEEEEECCCCCeEEEEecccc-cC
Confidence 45666555664 56776433334457889999988887643211 13334445442 2 2 3456664211 22
Q ss_pred CCeEEEEECCCCeEEEcCCC----CCCCcceEEEEEC------CEEEEEeccC--CCCCccEEEEEeCC-CCc--EEEcc
Q psy11771 251 MSSGERFNVRRNSWEPIAPM----LSRRSTHEVVNIE------GYLLTMGGND--GSSSLNSVEKYDPK-LNK--WQLLT 315 (347)
Q Consensus 251 ~~~v~~yd~~~~~W~~~~~~----~~~~~~~~~~~~~------~~lyv~GG~~--~~~~~~~v~~yd~~-~~~--W~~~~ 315 (347)
...++.|......|.....+ ...+.+.++++.+ ..| ++|.-. .......+++|--. ... |....
T Consensus 245 ~G~V~v~~~~~~~~~~~~~l~G~~~g~~fG~sva~~D~ngDG~~Dl-vVGap~~~~~~~~G~v~vy~~~g~g~~~~~~~~ 323 (597)
T 3v4v_A 245 IGKAYIFSIDEKELNILHEMKGKKLGSYFGASVCAVDLNADGFSDL-LVGAPMQSTIREEGRVFVYINSGSGAVMNAMET 323 (597)
T ss_dssp TCEEEEEEECSSSEEEEEEEECSSTTCCTTSEEEEECTTCSSSCEE-EEEETTCCSSSCCCEEEEEEECSSSSCEECCSS
T ss_pred CceEEEEecCCCceeEEEEecccccCCCCcceEEEEeeCCCCCceE-EEEcccccCCCcCCeEEEEEECCCCcceeccce
Confidence 35788887767788765432 2234555666542 245 566321 11123467777432 232 54322
Q ss_pred CCC-----CCcceeEEEEEcCCCcc
Q psy11771 316 PML-----TRRSSIGAAVLETLNIE 335 (347)
Q Consensus 316 ~~~-----~~r~~~~~~~~~~~~~~ 335 (347)
.++ ..+++.+++.+++.+-.
T Consensus 324 ~l~g~~~~~~~FG~sva~~gDlngD 348 (597)
T 3v4v_A 324 NLVGSDKYAARFGESIVNLGDIDND 348 (597)
T ss_dssp CBCTTCCTTCCTTSCEECCCCSSCS
T ss_pred EEeCCcccccccccccccccccCCC
Confidence 222 24566666656665433
No 314
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=29.31 E-value=2.6e+02 Score=23.68 Aligned_cols=62 Identities=8% Similarity=0.081 Sum_probs=35.9
Q ss_pred CCEEEEEcccCCCccCCe-EEEEECCCCeEEEcCCCCC--CCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCC
Q psy11771 236 DGAIYCVGGNDGTMCMSS-GERFNVRRNSWEPIAPMLS--RRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 236 ~~~iyv~GG~~~~~~~~~-v~~yd~~~~~W~~~~~~~~--~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
++.+.+.|+.+ .+ +..||..+.+-.. .+.. .......+.+ +++.++.|+.+ ..+.+||..+.
T Consensus 206 ~g~~l~s~s~d-----~~~v~iwd~~~~~~~~--~~~~g~h~~~v~~~~~s~~~~~l~s~s~d-----~~v~iw~~~~~ 272 (355)
T 3vu4_A 206 KSDMVATCSQD-----GTIIRVFKTEDGVLVR--EFRRGLDRADVVDMKWSTDGSKLAVVSDK-----WTLHVFEIFND 272 (355)
T ss_dssp TSSEEEEEETT-----CSEEEEEETTTCCEEE--EEECTTCCSCEEEEEECTTSCEEEEEETT-----CEEEEEESSCC
T ss_pred CCCEEEEEeCC-----CCEEEEEECCCCcEEE--EEEcCCCCCcEEEEEECCCCCEEEEEECC-----CEEEEEEccCC
Confidence 56777777765 45 8889988764322 1110 1112223333 57777777754 36888887654
No 315
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=28.67 E-value=4.4e+02 Score=26.12 Aligned_cols=146 Identities=6% Similarity=-0.078 Sum_probs=72.3
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCcEEec
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGKWAPV 220 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 220 (347)
++.++.|+.+ ..+.++|..+.+....-..+ ....++.. ++...+.|+.+ ..+..||..+.+-...
T Consensus 69 g~~L~S~s~D-----~~v~lWd~~~~~~~~~~~~~---~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~~~ 135 (902)
T 2oaj_A 69 GIYLVVINAK-----DTVYVLSLYSQKVLTTVFVP---GKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLSSF 135 (902)
T ss_dssp TTEEEEEETT-----CEEEEEETTTCSEEEEEECS---SCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEEEE
T ss_pred CCEEEEEECc-----CeEEEEECCCCcEEEEEcCC---CCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccccc
Confidence 4444555533 56888888776532111111 11122222 44555555533 4588899887654211
Q ss_pred C--------CCCCCC--cceEEEEEC--CEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCC---------------CC
Q psy11771 221 P--------SMSSRR--SSCGVAALD--GAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPML---------------SR 273 (347)
Q Consensus 221 ~--------~~p~~r--~~~~~~~~~--~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~---------------~~ 273 (347)
. ..+..+ .-.+++... +.++++|+.+ ..+ .||..+.+-...-... ..
T Consensus 136 ~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~d-----g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 136 KLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEY-----VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp EECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSS-----CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred eeccccccccccccCCCCeEEEEEccCCCCEEEEEeCC-----CcE-EEECCCCceEEEEecccCCcCCCcccccccccc
Confidence 0 001111 112333332 3566666543 467 8999887643221110 00
Q ss_pred -CcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCcEE
Q psy11771 274 -RSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312 (347)
Q Consensus 274 -~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 312 (347)
......+.+ +++.++.|+.++ .+.+||..+.+-.
T Consensus 210 h~~~V~~v~fspdg~~lasgs~Dg-----~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 210 RTPKVIQSLYHPNSLHIITIHEDN-----SLVFWDANSGHMI 246 (902)
T ss_dssp BCCCEEEEEECTTSSEEEEEETTC-----CEEEEETTTCCEE
T ss_pred cCCCeEEEEEcCCCCEEEEEECCC-----eEEEEECCCCcEE
Confidence 011233444 677778887653 5889999877653
No 316
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=28.43 E-value=2.7e+02 Score=23.52 Aligned_cols=126 Identities=9% Similarity=0.076 Sum_probs=63.9
Q ss_pred EEEEE-CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCC---C-CCCcceEEEEE--CCEEEEEcccCCCccCCeEEE
Q psy11771 184 RIAVV-ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSM---S-SRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGER 256 (347)
Q Consensus 184 ~~~~~-~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~---p-~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~ 256 (347)
.++.. ++++|+......... ..++.++ +.+-...+.. + ........+.+ +++||++.-.........+.+
T Consensus 21 ~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred eEEECCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 34443 678998743211111 4677777 4444433321 1 11122233333 489999852210001257999
Q ss_pred EECCCCeEEEcCCCC-----CCCcceEEEEE--CCEEEEEeccCCCCCccEEEEEeCCCCc-EEEc
Q psy11771 257 FNVRRNSWEPIAPML-----SRRSTHEVVNI--EGYLLTMGGNDGSSSLNSVEKYDPKLNK-WQLL 314 (347)
Q Consensus 257 yd~~~~~W~~~~~~~-----~~~~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~-W~~~ 314 (347)
||+.+++-...-.++ ....-..+++- ++.+|+..-.. .....+.+||+.+++ |..+
T Consensus 98 ~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 98 WDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 999988743221221 11122344444 47899975310 013579999998654 6555
No 317
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=27.26 E-value=2.8e+02 Score=23.27 Aligned_cols=143 Identities=10% Similarity=0.053 Sum_probs=78.1
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCC----CcEEeC-C-CCCCCccceEEEE--ECCEEEEEcCcCCCCccceEEEEeCC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLT----GVWSSC-P-AMTTRRRYCRIAV--VENCLYALGGFDSTNYQASVERLDPR 213 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~----~~W~~~-~-~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~ 213 (347)
++.||+.-.. ...++++++.. .....+ . .+..+ .+++. .++.||+.-.. ...++++|+.
T Consensus 41 ~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ly~~d~~-----~~~I~~~~~~ 107 (316)
T 1ijq_A 41 SNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNIYWTDSV-----LGTVSVADTK 107 (316)
T ss_dssp TTEEEEEETT-----TTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEEEEEETT-----TTEEEEEETT
T ss_pred CCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCeEEEEECC-----CCEEEEEeCC
Confidence 6789988542 35788998876 222221 1 12222 34444 47899998432 3678889987
Q ss_pred CCcEEecC--CCCCCCcceEEEE--ECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcceEEEEE--CCEEE
Q psy11771 214 MGKWAPVP--SMSSRRSSCGVAA--LDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLL 287 (347)
Q Consensus 214 ~~~W~~~~--~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~~~~~~~--~~~ly 287 (347)
...-..+. .+..+ .++++ .++.||+..-.. ...++++++....-+.+..... ..-.+++.- +++||
T Consensus 108 g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~~----~~~I~~~~~dG~~~~~~~~~~~-~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 108 GVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWGT----PAKIKKGGLNGVDIYSLVTENI-QWPNGITLDLLSGRLY 179 (316)
T ss_dssp SSSEEEEEECTTCCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCCEEEEECSSC-SCEEEEEEETTTTEEE
T ss_pred CCceEEEEECCCCCc---ceEEeCCCCCEEEEEccCC----CCeEEEEcCCCCCeEEEEECCC-CCceEEEEeccCCEEE
Confidence 65433322 22222 23444 368999875211 2579999986544333322111 112233433 57999
Q ss_pred EEeccCCCCCccEEEEEeCCCCc
Q psy11771 288 TMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 288 v~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+.-.. .+.|+++|+....
T Consensus 180 ~~D~~-----~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 180 WVDSK-----LHSISSIDVNGGN 197 (316)
T ss_dssp EEETT-----TTEEEEEETTSCS
T ss_pred EEECC-----CCeEEEEecCCCc
Confidence 98643 3578899886543
No 318
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=27.23 E-value=2.8e+02 Score=23.38 Aligned_cols=125 Identities=10% Similarity=0.021 Sum_probs=64.1
Q ss_pred EEEEE-CCEEEEEccc-CCCCCCCeEEEEeCCCCcEEeCCCCC----CC-ccceEEEEE-CCEEEEEcCcCCCCccceEE
Q psy11771 137 GTCSF-DGLLYACGGY-DGASCLSSMERYDPLTGVWSSCPAMT----TR-RRYCRIAVV-ENCLYALGGFDSTNYQASVE 208 (347)
Q Consensus 137 ~~~~~-~~~lyv~GG~-~~~~~~~~~~~~d~~~~~W~~~~~~~----~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 208 (347)
++++. ++++|+.... .... ..++.++ +.+....+... .. ..-++++.- +++||++.-.........+.
T Consensus 21 ~va~~~~g~~~v~~~~~~~~~--~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQPE--MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEECTTSCEEEEECGGGCCS--CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred eEEECCCCCEEEEeCCCCCCc--eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 34443 6889988532 2111 4677777 44444333211 11 223334433 57999985211001135799
Q ss_pred EEeCCCCcEEecCCCC-----CCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCC-eEEEc
Q psy11771 209 RLDPRMGKWAPVPSMS-----SRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRN-SWEPI 267 (347)
Q Consensus 209 ~yd~~~~~W~~~~~~p-----~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~-~W~~~ 267 (347)
.||+.+++-...-.++ .......+++- ++.+|+..... .....+.+||+.++ .|..+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~--~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP--DDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS--GGGCEEEEEETTTCCEEEEC
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc--CCCCeEEEEECCCCCEEEEe
Confidence 9999987743221111 11122344444 47899974210 02368899998755 46554
No 319
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=26.58 E-value=2.3e+02 Score=26.87 Aligned_cols=154 Identities=10% Similarity=0.049 Sum_probs=84.2
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE----ECCEEEEEcCcCC------------CCccc
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV----VENCLYALGGFDS------------TNYQA 205 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~----~~~~lyv~GG~~~------------~~~~~ 205 (347)
+..+||.-. ..+.+.+.|+.+.+-.++-.+|.....++++. -++++|+.+-... ....+
T Consensus 101 G~~lfVnd~-----~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 101 GRFLFMNDK-----ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEET-----TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred CCEEEEEcC-----CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 346777533 23679999999987554335665555566554 2568888753211 12345
Q ss_pred eEEEEeCCCCc--EEec-CCCCCCCcceEEEEEC-CEEEEEcccCC--------------------------------Cc
Q psy11771 206 SVERLDPRMGK--WAPV-PSMSSRRSSCGVAALD-GAIYCVGGNDG--------------------------------TM 249 (347)
Q Consensus 206 ~~~~yd~~~~~--W~~~-~~~p~~r~~~~~~~~~-~~iyv~GG~~~--------------------------------~~ 249 (347)
.+-+.|..+.+ |+-. +.-| ....+..+ +.+|+..-.+. ..
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~p----d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~ 251 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGNL----DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQ 251 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSCC----CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSE
T ss_pred eEEEEECCCCeEEEEEEeCCCc----cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCee
Confidence 67788998764 5533 1211 11222222 33444432110 11
Q ss_pred cCCeEEEEECCCCeEEE-cCCCCCCCcceEEEEE-CCE-EEEEeccCCCCCccEEEEEeCCCC
Q psy11771 250 CMSSGERFNVRRNSWEP-IAPMLSRRSTHEVVNI-EGY-LLTMGGNDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 250 ~~~~v~~yd~~~~~W~~-~~~~~~~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~v~~yd~~~~ 309 (347)
..+.+-+.|..+.+.+. +..+|.+..-|++... +|+ +|+.+.. .+.+.+||..+.
T Consensus 252 ~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~ 309 (595)
T 1fwx_A 252 ELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRF 309 (595)
T ss_dssp EETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGH
T ss_pred EECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECccc
Confidence 23457788888733223 2344555566767666 454 6665543 357889998854
No 320
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=26.44 E-value=4.6e+02 Score=25.58 Aligned_cols=152 Identities=12% Similarity=0.157 Sum_probs=82.0
Q ss_pred eEEEEeCCCCcEEeCCCCCC---CccceEEEEE----CCEEEEEcCcCCCCccceEEEEeCCCCcEEecCCCCCCC----
Q psy11771 159 SMERYDPLTGVWSSCPAMTT---RRRYCRIAVV----ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRR---- 227 (347)
Q Consensus 159 ~~~~~d~~~~~W~~~~~~~~---~r~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r---- 227 (347)
.+++=+-.-++|+++..++. .-.......+ .+.+|+..... ..+++=.-.-.+|+.+..++...
T Consensus 144 gl~~S~DgG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~v~~S~DgG~TW~~~~~~~~~~~~~~ 218 (789)
T 1sqj_A 144 GIWKSSDRAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-----QGMYVTHDGGVSWEPVAGQPSSWLNRT 218 (789)
T ss_dssp CEEEESSTTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-----TCEEEESSTTSSCEECTTCCCSCCHHH
T ss_pred CEEEECCCCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-----CeEEEEcCCCcCcccCCCCcCcccccc
Confidence 35655555678998875441 1122333333 24777765321 22333222346899987555432
Q ss_pred ------------cceEEEEE--CCEEEEEcccCC---CccCCeEEEEECCCCeEEEcCCCCCC---------Cc---ce-
Q psy11771 228 ------------SSCGVAAL--DGAIYCVGGNDG---TMCMSSGERFNVRRNSWEPIAPMLSR---------RS---TH- 277 (347)
Q Consensus 228 ------------~~~~~~~~--~~~iyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~~~~---------~~---~~- 277 (347)
..+.++.. .+.||+..+... ......+++.+-...+|+.+.+.+.. .. +.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~~~~p~~~~~~~~~~~g~~ 298 (789)
T 1sqj_A 219 TGAFPDKKPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVGNSSPAPYNNQTFPAGGFC 298 (789)
T ss_dssp HHTSTTCCCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTTTEESCCCSSCCSCCCEEE
T ss_pred ccccCcccccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCCccccccccccccccCceE
Confidence 11444432 788998843211 01235788888888999999875431 12 22
Q ss_pred EEEEE---CCEEEEEeccCCCC-CccEEEEEeCCCCcEEEcc
Q psy11771 278 EVVNI---EGYLLTMGGNDGSS-SLNSVEKYDPKLNKWQLLT 315 (347)
Q Consensus 278 ~~~~~---~~~lyv~GG~~~~~-~~~~v~~yd~~~~~W~~~~ 315 (347)
.+++. .+.||+.++..... ....+++=+-.-.+|+.+.
T Consensus 299 ~lav~p~~~~~v~~~~~~~~~~~~~~~l~~S~DgG~tW~~~~ 340 (789)
T 1sqj_A 299 GLSVDATNPNRLVVITLDRDPGPALDSIYLSTDAGATWKDVT 340 (789)
T ss_dssp EEEEETTEEEEEEEEEECCCSCSSCCCEEEESSTTSSEEEHH
T ss_pred EEEECCCCCCEEEEEEeccCCCcccccEEEecCCCCCceeCc
Confidence 33333 25788877532100 0123555555677899886
No 321
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=25.28 E-value=1.4e+02 Score=28.38 Aligned_cols=152 Identities=14% Similarity=-0.006 Sum_probs=83.0
Q ss_pred CeEEEEeCCCCcEEe-CCCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc-E---------EecCCCC
Q psy11771 158 SSMERYDPLTGVWSS-CPAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK-W---------APVPSMS 224 (347)
Q Consensus 158 ~~~~~~d~~~~~W~~-~~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~-W---------~~~~~~p 224 (347)
+.+-+.|..+.+.+. +..+|.+...|++... +..+|+.+.. .+.+.+||..+.+ + ......+
T Consensus 254 ~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~-----s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~ 328 (595)
T 1fwx_A 254 NGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKL-----SPTVTVLDVTRFDAVFYENADPRSAVVAEPE 328 (595)
T ss_dssp TTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTT-----SSBEEEEEGGGHHHHHHSCCCGGGGEEECCB
T ss_pred CcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCC-----CCeEEEEECcccccccccccCcccceEEEcC
Confidence 447778887743222 2344455555665554 3467777653 4778999988542 1 0112223
Q ss_pred CCCc-ceEEEEECCEEEEEcccCCCccCCeEEEEECCC--------CeEEEcCCCCCCCc-ceEEEE------E-CCEEE
Q psy11771 225 SRRS-SCGVAALDGAIYCVGGNDGTMCMSSGERFNVRR--------NSWEPIAPMLSRRS-THEVVN------I-EGYLL 287 (347)
Q Consensus 225 ~~r~-~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~--------~~W~~~~~~~~~~~-~~~~~~------~-~~~ly 287 (347)
.+.. .|.+..-+|.+|+.-..+ +.+.+||.++ +.+..+..++.... +|.... - +..||
T Consensus 329 vG~gP~h~aF~~dG~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~ 403 (595)
T 1fwx_A 329 LGLGPLHTAFDGRGNAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLV 403 (595)
T ss_dssp CCSCEEEEEECTTSEEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEE
T ss_pred CCCCcceEEECCCCeEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEE
Confidence 3222 333333457888875543 5677777665 22445544444322 333332 1 34677
Q ss_pred EEeccCCCCCc-------cEEEEEeCCCCcEEEccCCCC
Q psy11771 288 TMGGNDGSSSL-------NSVEKYDPKLNKWQLLTPMLT 319 (347)
Q Consensus 288 v~GG~~~~~~~-------~~v~~yd~~~~~W~~~~~~~~ 319 (347)
+..+.+.+..+ .+-..||.+.++=+.+...|.
T Consensus 404 ~~Nk~skdr~~~~gp~~~~~~ql~dis~~~m~lv~d~p~ 442 (595)
T 1fwx_A 404 CLSKFSKDRFLNVGPLKPENDQLIDISGDKMVLVHDGPT 442 (595)
T ss_dssp EEESCCTTSSCCCCSSCCEEEEEEECSSSSCEEEEEEEE
T ss_pred EcCCCCccccccCCCCCCCcceEEEcCCCcEEEEEEEcC
Confidence 77665533321 235889998888777766554
No 322
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=25.16 E-value=3.1e+02 Score=23.21 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=69.8
Q ss_pred CeEEEEeCC-CCcEEeCCCC--CC-CccceEEEEE-CC-EEEEEcCcCCCCccceEEE--EeCCCCcEE----ecCCCCC
Q psy11771 158 SSMERYDPL-TGVWSSCPAM--TT-RRRYCRIAVV-EN-CLYALGGFDSTNYQASVER--LDPRMGKWA----PVPSMSS 225 (347)
Q Consensus 158 ~~~~~~d~~-~~~W~~~~~~--~~-~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~--yd~~~~~W~----~~~~~p~ 225 (347)
+.+.+||.. +.+...+... +. ...-..++.. ++ .+|+.+... +.+.. +|..+.+.. .+..+|.
T Consensus 167 ~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 167 NKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp TEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred CEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 568888887 6665433222 11 1111222222 44 677765321 34444 455555542 3444443
Q ss_pred CC---c-------ceEEEE-E--CC-EEEEEcccCCCccCCeEEEEECC-CCeEEEc----CCCC-CCCcceEEEE---E
Q psy11771 226 RR---S-------SCGVAA-L--DG-AIYCVGGNDGTMCMSSGERFNVR-RNSWEPI----APML-SRRSTHEVVN---I 282 (347)
Q Consensus 226 ~r---~-------~~~~~~-~--~~-~iyv~GG~~~~~~~~~v~~yd~~-~~~W~~~----~~~~-~~~~~~~~~~---~ 282 (347)
.. . ....+. + ++ .||+.....+......+..|+.. +.+...+ .... .++ ..+... -
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~-~~a~sp~~~d 320 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGH-SNAVSPCPWS 320 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTT-CCCEEECTTC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcc-cceecCCCcC
Confidence 21 1 122233 3 44 56765422211112378888874 5555532 1111 111 111122 2
Q ss_pred CCEEEEEeccCCCCCccEEEEEeCCCCcEEEcc--CCCCCcceeEEEE
Q psy11771 283 EGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLT--PMLTRRSSIGAAV 328 (347)
Q Consensus 283 ~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~--~~~~~r~~~~~~~ 328 (347)
++.||+.+.. .+.+.+|+...+.=+.+. +.|.|-+-..++-
T Consensus 321 g~~l~v~~~~-----~~~v~v~~~~~~~l~~~~~~~~~~p~~~~~~~~ 363 (365)
T 1jof_A 321 DEWMAITDDQ-----EGWLEIYRWKDEFLHRVARVRIPEPGFGMNAIW 363 (365)
T ss_dssp TTEEEEECSS-----SCEEEEEEEETTEEEEEEEEECCSTTEEEEEEE
T ss_pred CCEEEEEEcC-----CCeEEEEEEchhhCceeeEEEcCCCcceeeeEe
Confidence 3456655432 246777776555433333 2445544444443
No 323
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=24.59 E-value=2.2e+02 Score=24.47 Aligned_cols=64 Identities=11% Similarity=0.187 Sum_probs=38.8
Q ss_pred CCEEEEEcCcC---C--CCccceEEEEeCCCCcEEecCCCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCC
Q psy11771 189 ENCLYALGGFD---S--TNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 189 ~~~lyv~GG~~---~--~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~ 261 (347)
++++|+....+ . .....+++.+|..+.+ .+..++.+. ..+++.. +..||+.++ +++.+||.++
T Consensus 265 g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~-------~~v~v~D~~t 334 (361)
T 2oiz_A 265 SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG-------GNVNVYDISQ 334 (361)
T ss_dssp TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-CCEEEEETTTTEEEEECS-------SCEEEEECSS
T ss_pred CCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC-------CeEEEEECCC
Confidence 57999975411 1 1134689999998875 333333333 3344433 346776542 6899999988
Q ss_pred C
Q psy11771 262 N 262 (347)
Q Consensus 262 ~ 262 (347)
.
T Consensus 335 ~ 335 (361)
T 2oiz_A 335 P 335 (361)
T ss_dssp S
T ss_pred C
Confidence 6
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=23.28 E-value=77 Score=27.65 Aligned_cols=107 Identities=12% Similarity=0.005 Sum_probs=0.0
Q ss_pred EECCEEEEEcCcCCCCccceEEEEeCCCCc--EEecCC--CCCCCcceEEEEECCEEEEEc-ccCCCccCCeEEEEECCC
Q psy11771 187 VVENCLYALGGFDSTNYQASVERLDPRMGK--WAPVPS--MSSRRSSCGVAALDGAIYCVG-GNDGTMCMSSGERFNVRR 261 (347)
Q Consensus 187 ~~~~~lyv~GG~~~~~~~~~~~~yd~~~~~--W~~~~~--~p~~r~~~~~~~~~~~iyv~G-G~~~~~~~~~v~~yd~~~ 261 (347)
..++.+||... ...++.+|..+.+ |+.-.. .|.-.........++.+|++. ..+ ..++.||..+
T Consensus 8 ~~~~~V~v~t~------dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~d-----G~l~a~~~~~ 76 (339)
T 2be1_A 8 SLSDILIAADV------EGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGD-----GNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEEEEET------TSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTT-----TEEEEEETTT
T ss_pred eeCCEEEEEeC------CCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCC-----CEEEEEECCC
Q ss_pred CeEEEcCCCCCCCcceEEEE-------------ECCEEEEEeccCCCCCccEEEEEeCCCCc
Q psy11771 262 NSWEPIAPMLSRRSTHEVVN-------------IEGYLLTMGGNDGSSSLNSVEKYDPKLNK 310 (347)
Q Consensus 262 ~~W~~~~~~~~~~~~~~~~~-------------~~~~lyv~GG~~~~~~~~~v~~yd~~~~~ 310 (347)
+.|.---.++.......+.. .++.+|+-+- ...+++.|..+.+
T Consensus 77 G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~------~g~l~ald~~tG~ 132 (339)
T 2be1_A 77 GLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSM------RTIMYTINMLNGE 132 (339)
T ss_dssp EEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEE------EEEEEEEETTTCC
T ss_pred CcEEeeeccccceeccccccCCCceeecccccccCCEEEEEec------CCEEEEEECCCCc
No 325
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=23.06 E-value=5.1e+02 Score=24.94 Aligned_cols=98 Identities=14% Similarity=0.097 Sum_probs=54.5
Q ss_pred cceEEEEeCCCC--cE--EecCCCCCCCcceEEE-EECCEEEEEcccCCCccCCeEEEEECCC-CeEEE-cCCCCCCCcc
Q psy11771 204 QASVERLDPRMG--KW--APVPSMSSRRSSCGVA-ALDGAIYCVGGNDGTMCMSSGERFNVRR-NSWEP-IAPMLSRRST 276 (347)
Q Consensus 204 ~~~~~~yd~~~~--~W--~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~-~~~~~~~~~~ 276 (347)
.+.++.+|..+. .+ +.+.+-.... ..+.. ..++.||+..-.+ ......++.+|..+ ..|+. +-+-......
T Consensus 294 ~~~l~~~d~~~~~~~~~~~~l~~~~~~~-~~s~~~~~g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l 371 (751)
T 2xe4_A 294 TAEVHLLDLRKGNAHNTLEIVRPREKGV-RYDVQMHGTSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFM 371 (751)
T ss_dssp CEEEEEEESSSCTTCCCEEESSCCCTTC-CEEEEEETTTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEE
T ss_pred CceEEEEECCCCCCCceeEEeecCCCCc-eEEEeeeeCCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEE
Confidence 467888998764 46 5554322211 12222 3377888875443 12236899999876 57876 4322221111
Q ss_pred eEEEEECCEEEEEeccCCCCCccEEEEEeC
Q psy11771 277 HEVVNIEGYLLTMGGNDGSSSLNSVEKYDP 306 (347)
Q Consensus 277 ~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~ 306 (347)
......++.|++....++ ...++.+|+
T Consensus 372 ~~~~~~~~~lv~~~~~~g---~~~l~~~dl 398 (751)
T 2xe4_A 372 ESIAVRSNYLVVAGRRAG---LTRIWTMMA 398 (751)
T ss_dssp EEEEECSSEEEEEEEETT---EEEEEEEEC
T ss_pred EEEEEECCEEEEEEEeCC---EEEEEEEec
Confidence 223334677777664433 356888886
No 326
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=23.00 E-value=3.5e+02 Score=23.05 Aligned_cols=144 Identities=13% Similarity=0.030 Sum_probs=81.5
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEEE--ECCEEEEEcCcCCCCccceEEEEeCCCCcEE
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV--VENCLYALGGFDSTNYQASVERLDPRMGKWA 218 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~yd~~~~~W~ 218 (347)
.++.||+.-- ....++++++.....+.+..... ....+++. .++.||+.-.. ...++++++....-.
T Consensus 83 ~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~~~-~~p~glavd~~~g~ly~~d~~-----~~~I~~~~~dG~~~~ 151 (349)
T 3v64_C 83 RRELVFWSDV-----TLDRILRANLNGSNVEEVVSTGL-ESPGGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRK 151 (349)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSCSCEEEECSSC-SCCCEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCE
T ss_pred cccEEEEEec-----cCCceEEEecCCCCceEEEeCCC-CCccEEEEecCCCeEEEEcCC-----CCeEEEEcCCCCceE
Confidence 4688988743 23578999988766444321111 11123444 47899998542 357888988765433
Q ss_pred ecC--CCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCCcc-eEEEEE--CCEEEEEec
Q psy11771 219 PVP--SMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRST-HEVVNI--EGYLLTMGG 291 (347)
Q Consensus 219 ~~~--~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~~~-~~~~~~--~~~lyv~GG 291 (347)
.+. .+..| .++++- ++.||+.--.. ...++++++....-+.+..- .... .+++.- +++||+.-.
T Consensus 152 ~l~~~~l~~P---~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~--~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 152 VLLWQSLEKP---RAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADT--HLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EEECTTCSCE---EEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCCS--SCSCEEEEEEETTTTEEEEEET
T ss_pred EEEeCCCCCc---ceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEEC--CCCCcceEEEeCCCCEEEEEEC
Confidence 322 22233 234443 68899874321 36799999876543333221 1112 233332 689999854
Q ss_pred cCCCCCccEEEEEeCCCC
Q psy11771 292 NDGSSSLNSVEKYDPKLN 309 (347)
Q Consensus 292 ~~~~~~~~~v~~yd~~~~ 309 (347)
. .+.|+++|+...
T Consensus 223 ~-----~~~I~~~~~dG~ 235 (349)
T 3v64_C 223 K-----HHVIERANLDGS 235 (349)
T ss_dssp T-----TTEEEEEETTSC
T ss_pred C-----CCEEEEEeCCCC
Confidence 2 257888987654
No 327
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=22.45 E-value=5.5e+02 Score=25.04 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=87.2
Q ss_pred CEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCC-CC-----CCc-cceEEEEE---CCEEEEEcCcCCCCccceEEEEeC
Q psy11771 143 GLLYACGGYDGASCLSSMERYDPLTGVWSSCPA-MT-----TRR-RYCRIAVV---ENCLYALGGFDSTNYQASVERLDP 212 (347)
Q Consensus 143 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~-~~-----~~r-~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~yd~ 212 (347)
+.+|+..|.........+++=+-.-.+|+++.. ++ ..| ....++.. .+.+|+. ... ..+++=+=
T Consensus 77 ~~i~~~~g~~~~~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g-~~~-----~gl~~S~D 150 (789)
T 1sqj_A 77 DRLYLAQGRYVGDEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMG-TRT-----EGIWKSSD 150 (789)
T ss_dssp EEEEEEECSCTTSSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEE-CSS-----SCEEEESS
T ss_pred CEEEEEeCccCCCcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEE-ecc-----CCEEEECC
Confidence 568887664211111445655556678988642 11 112 12234443 3467663 311 33454444
Q ss_pred CCCcEEecCCCCC---CCcceEEEEE----CCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCC-----------
Q psy11771 213 RMGKWAPVPSMSS---RRSSCGVAAL----DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRR----------- 274 (347)
Q Consensus 213 ~~~~W~~~~~~p~---~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~----------- 274 (347)
.-.+|+.+..+|. .-.....+.+ .+.||+..... ..+++=.-.-.+|+.+..++...
T Consensus 151 gG~TW~~~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~-----~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~ 225 (789)
T 1sqj_A 151 RAKTWTNVTSIPDAFTNGIGYTSVIFDPERNGTIYASATAP-----QGMYVTHDGGVSWEPVAGQPSSWLNRTTGAFPDK 225 (789)
T ss_dssp TTSSCEEETTSCCCCSTTTCEEEEEECTTSTTCEEEEESST-----TCEEEESSTTSSCEECTTCCCSCCHHHHHTSTTC
T ss_pred CCcccCCCccCccccCCCCCeEEEEECCCCCCEEEEEEcCC-----CeEEEEcCCCcCcccCCCCcCccccccccccCcc
Confidence 4578999876441 1122233333 24677765321 23444333455899988655432
Q ss_pred -----cceEEEEE--CCEEEEEeccCC---CCCccEEEEEeCCCCcEEEccCCCC
Q psy11771 275 -----STHEVVNI--EGYLLTMGGNDG---SSSLNSVEKYDPKLNKWQLLTPMLT 319 (347)
Q Consensus 275 -----~~~~~~~~--~~~lyv~GG~~~---~~~~~~v~~yd~~~~~W~~~~~~~~ 319 (347)
+.+.++.. ++.||+..+... ......+++.+-...+|+.+...+.
T Consensus 226 ~~~~~~~~~~~~~p~~~~l~~~~~~~~~p~~g~~g~l~~S~DgG~tW~~~~~~~~ 280 (789)
T 1sqj_A 226 KPASIAPQPMKVALTPNFLYVTYADYPGPWGVTFGEVWRQNRTSGAWDDITPRVG 280 (789)
T ss_dssp CCSSSSCEEEEEEECSSEEEEEEESSCSSSCCCCCCEEEEETTTCCEEECCCCTT
T ss_pred cccccccceeEEcCCCCeEEEEEecCCCCCCCCCceEEEEeCCCCceEECcCCCC
Confidence 11444433 789999853210 0123468888889999999986543
No 328
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=21.78 E-value=5e+02 Score=24.37 Aligned_cols=71 Identities=13% Similarity=0.110 Sum_probs=43.1
Q ss_pred EEEEEcccCCCccCCeEEEEECCC-----CeEEEc----CCCCCCCcceEEEEE-CC-EEEEEe-ccCCCCCccEEEEEe
Q psy11771 238 AIYCVGGNDGTMCMSSGERFNVRR-----NSWEPI----APMLSRRSTHEVVNI-EG-YLLTMG-GNDGSSSLNSVEKYD 305 (347)
Q Consensus 238 ~iyv~GG~~~~~~~~~v~~yd~~~-----~~W~~~----~~~~~~~~~~~~~~~-~~-~lyv~G-G~~~~~~~~~v~~yd 305 (347)
+-+++||....+ +.+|.+|..+ -.|+.- +.|-.......++.+ ++ -+.||| |++.......++++|
T Consensus 152 rtvLvggmg~GG--~~~yALDVT~P~~p~~LWe~~~~~~~~LG~t~s~P~I~~~~~g~w~~vfG~GY~~~~~~~~Lyv~d 229 (570)
T 3hx6_A 152 HTVLIGSLRAGG--KGLFALDVTDPANIKLLWEIGVDQEPDLGYSFPKPTVARLHNGKWAVVTGNGYSSMNDKAALLIID 229 (570)
T ss_dssp EEEEEEECTTSC--SEEEEEECSSGGGCEEEEEEETTTCTTCCBCCSCCEEEECTTSSEEEEEECCBSCTTCCEEEEEEE
T ss_pred eEEEEEecCCCC--cEEEEEECCCCCCCceeEEECCCCccccCccccCCEEEEecCCCEEEEEccccCCCCCccEEEEEE
Confidence 346666654333 4677888765 357654 345555555566665 33 455565 665544456799999
Q ss_pred CCCCc
Q psy11771 306 PKLNK 310 (347)
Q Consensus 306 ~~~~~ 310 (347)
.++.+
T Consensus 230 ~~tG~ 234 (570)
T 3hx6_A 230 METGA 234 (570)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 99876
No 329
>2cwj_A Putative endonuclease; hydrolase, endoribonucrease, structural GE NPPSFA, national project on protein structural and function analyses; 3.60A {Aeropyrum pernix} SCOP: d.79.1.1
Probab=21.66 E-value=39 Score=24.45 Aligned_cols=25 Identities=28% Similarity=0.417 Sum_probs=15.2
Q ss_pred CCCccceeeecccccccccceEEEec
Q psy11771 1 MPIAPMLYRRSRSGVAGLGKMLYVVG 26 (347)
Q Consensus 1 ~~~~~~~~~r~~h~~~~~~~~~y~~G 26 (347)
||-+|-|.+...|++.. ++.+|+-|
T Consensus 1 ~~~~p~~~g~ys~av~~-g~~l~vSG 25 (123)
T 2cwj_A 1 METAPKPVGPYSQAVES-GCFMFVSG 25 (123)
T ss_dssp ---CCCCCSSCCSCEEE-TTEEEEEE
T ss_pred CCCCCCCCCCcccEEEE-CCEEEEec
Confidence 67777777767776654 77777766
No 330
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=21.14 E-value=5.4e+02 Score=24.51 Aligned_cols=160 Identities=9% Similarity=-0.078 Sum_probs=0.0
Q ss_pred CCEEEEEcccCCCCCCCeEEEEeCCCCcEEeCCCCCCCccceEEE-----EECCEEEEEcCcCCC----CccceEEEEeC
Q psy11771 142 DGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIA-----VVENCLYALGGFDST----NYQASVERLDP 212 (347)
Q Consensus 142 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~~~~r~~~~~~-----~~~~~lyv~GG~~~~----~~~~~~~~yd~ 212 (347)
++++++.+. ..+..+|..+++-..+-............ .-+++..+++..... ....+++.||.
T Consensus 27 dg~~~~~~~-------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~ 99 (740)
T 4a5s_A 27 DHEYLYKQE-------NNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDL 99 (740)
T ss_dssp SSEEEEEET-------TEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEET
T ss_pred CCcEEEEcC-------CcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEEC
Q ss_pred CCCcEEecCCCCCCCcceEEEEECCEEEEEcccCCCccCCeEEEEECCCCeEEEcCCCCCCC----------------cc
Q psy11771 213 RMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRR----------------ST 276 (347)
Q Consensus 213 ~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~~~~~----------------~~ 276 (347)
.+++-..+...+......+-.--+..|..+.. ++++.+|..+.+-..+..-.... ..
T Consensus 100 ~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~-------~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~ 172 (740)
T 4a5s_A 100 NKRQLITEERIPNNTQWVTWSPVGHKLAYVWN-------NDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSA 172 (740)
T ss_dssp TTTEECCSSCCCTTEEEEEECSSTTCEEEEET-------TEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSS
T ss_pred CCCcEEEcccCCCcceeeEECCCCCEEEEEEC-------CeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCC
Q ss_pred eEEEEE--CCEEEEEeccCCC-------------------------------CCccEEEEEeCCC---C---cEEEcc
Q psy11771 277 HEVVNI--EGYLLTMGGNDGS-------------------------------SSLNSVEKYDPKL---N---KWQLLT 315 (347)
Q Consensus 277 ~~~~~~--~~~lyv~GG~~~~-------------------------------~~~~~v~~yd~~~---~---~W~~~~ 315 (347)
...... +++..++...+.. .....++++|.++ + ++..+.
T Consensus 173 ~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~ 250 (740)
T 4a5s_A 173 YSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQIT 250 (740)
T ss_dssp SBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEEC
T ss_pred CcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEec
No 331
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=20.71 E-value=5.4e+02 Score=24.30 Aligned_cols=139 Identities=12% Similarity=0.070 Sum_probs=79.3
Q ss_pred ECCEEEEEcccCCCCCCCeEEEEeCCCCcEEeC--CCCCCCccceEEEEE--CCEEEEEcCcCCCCccceEEEEeCCCCc
Q psy11771 141 FDGLLYACGGYDGASCLSSMERYDPLTGVWSSC--PAMTTRRRYCRIAVV--ENCLYALGGFDSTNYQASVERLDPRMGK 216 (347)
Q Consensus 141 ~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~~~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~yd~~~~~ 216 (347)
.+++||+.-. ....++++++....-+.+ ..+..| .+++.. ++.||+.-- +....+++.++....
T Consensus 90 ~~~~LY~tD~-----~~~~I~v~~~dG~~~~~l~~~~l~~P---~~iavdp~~G~lY~tD~----g~~~~I~r~~~dG~~ 157 (628)
T 4a0p_A 90 LGKNLYWADT-----GTNRIEVSKLDGQHRQVLVWKDLDSP---RALALDPAEGFMYWTEW----GGKPKIDRAAMDGSE 157 (628)
T ss_dssp TTTEEEEEET-----TTTEEEEEETTSTTCEEEECSSCCCE---EEEEEETTTTEEEEEEC----SSSCEEEEEETTSCS
T ss_pred CCCEEEEEEC-----CCCEEEEEecCCCcEEEEEeCCCCCc---ccEEEccCCCeEEEeCC----CCCCEEEEEeCCCCc
Confidence 5789999733 236789999866543322 223222 344444 689999741 113578999887655
Q ss_pred EEecC-CCCCCCcceEEEEE--CCEEEEEcccCCCccCCeEEEEECCCCeEEEcC-CCCCCCcceEEEEECCEEEEEecc
Q psy11771 217 WAPVP-SMSSRRSSCGVAAL--DGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIA-PMLSRRSTHEVVNIEGYLLTMGGN 292 (347)
Q Consensus 217 W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~-~~~~~~~~~~~~~~~~~lyv~GG~ 292 (347)
-+.+. .+..| .+++.- +++||++-.. .+.++++|+....=+.+. .++. -.++++.++.||+.--.
T Consensus 158 ~~~l~~~~~~P---~GlalD~~~~~LY~aD~~-----~~~I~~~d~dG~~~~v~~~~l~~---P~glav~~~~ly~tD~~ 226 (628)
T 4a0p_A 158 RTTLVPNVGRA---NGLTIDYAKRRLYWTDLD-----TNLIESSNMLGLNREVIADDLPH---PFGLTQYQDYIYWTDWS 226 (628)
T ss_dssp CEEEECSCSSE---EEEEEETTTTEEEEEETT-----TTEEEEEETTSCSCEEEEECCSC---EEEEEEETTEEEEEETT
T ss_pred eEEEECCCCCc---ceEEEccccCEEEEEECC-----CCEEEEEcCCCCceEEeeccCCC---ceEEEEECCEEEEecCC
Confidence 44432 22222 233332 5899998532 368999998653222222 2222 24667778999987532
Q ss_pred CCCCCccEEEEEeCC
Q psy11771 293 DGSSSLNSVEKYDPK 307 (347)
Q Consensus 293 ~~~~~~~~v~~yd~~ 307 (347)
.+.|+..|..
T Consensus 227 -----~~~I~~~dk~ 236 (628)
T 4a0p_A 227 -----RRSIERANKT 236 (628)
T ss_dssp -----TTEEEEEETT
T ss_pred -----CCEEEEEECC
Confidence 2356666643
Done!