RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy11771
(347 letters)
>d1zgka1 b.68.11.1 (A:322-609) Kelch-like ECH-associated protein 1,
KEAP1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 93.0 bits (229), Expect = 2e-22
Identities = 73/183 (39%), Positives = 100/183 (54%)
Query: 146 YACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNYQA 205
YA GG G +S+ERY+P W M TRR +AV+ LYA+GGFD TN
Sbjct: 105 YAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLN 164
Query: 206 SVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWE 265
S E P +W + +M++ RS GV L IY GG DG ++S ER++V +W
Sbjct: 165 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWT 224
Query: 266 PIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIG 325
+APM RRS + +G + +GG DG + L+SVE YDP + W +T M + RS +G
Sbjct: 225 FVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVG 284
Query: 326 AAV 328
AV
Sbjct: 285 VAV 287
Score = 89.2 bits (219), Expect = 6e-21
Identities = 67/280 (23%), Positives = 102/280 (36%), Gaps = 25/280 (8%)
Query: 1 MPIAPMLYRRSRSGVAGLGKMLYVVGGFYCQLLVFYKYPLYGRPAVNSSCGNYILPTAWV 60
+ +A + RS +G +LY VGG ++ + P +
Sbjct: 32 LRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVP 91
Query: 61 SVALQLLRHVKLPLLARDFLMNSVESESLIKESTECQELLLEAMKYHLLPEQRSLLTTKR 120
+ + + + + +R
Sbjct: 92 RNRIGVGVI-------------------------DGHIYAVGGSHGCIHHNSVERYEPER 126
Query: 121 TQERKPEGMLPYVFAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRR 180
+ ML +G + LLYA GG+DG + L+S E Y P W AM T R
Sbjct: 127 DEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR 186
Query: 181 RYCRIAVVENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIY 240
+ V+ NC+YA GG+D + SVER D W V M RRS+ G+ G IY
Sbjct: 187 SGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVHQGRIY 246
Query: 241 CVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVV 280
+GG DG + S E ++ ++W + M S RS V
Sbjct: 247 VLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVA 286
Score = 74.9 bits (182), Expect = 5e-16
Identities = 68/188 (36%), Positives = 101/188 (53%), Gaps = 5/188 (2%)
Query: 144 LLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNY 203
L+Y GGY S LS +E Y+P G W + R VV LYA+GG +++
Sbjct: 6 LIYTAGGYFRQS-LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPD 64
Query: 204 ----QASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNV 259
++++ +P +W+P MS R+ GV +DG IY VGG+ G + +S ER+
Sbjct: 65 GNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEP 124
Query: 260 RRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLT 319
R+ W +APML+RR V + L +GG DG++ LNS E Y P+ N+W+++T M T
Sbjct: 125 ERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNT 184
Query: 320 RRSSIGAA 327
RS G
Sbjct: 185 IRSGAGVC 192
Score = 58.0 bits (138), Expect = 3e-10
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 134 FAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAV 187
A+G G +Y GGYDG + L S+E YDP T WS MT+ R +AV
Sbjct: 234 SALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTWSEVTRMTSGRSGVGVAV 287
Score = 56.5 bits (134), Expect = 9e-10
Identities = 74/198 (37%), Positives = 104/198 (52%), Gaps = 4/198 (2%)
Query: 137 GTCSFDGLLYACGGY----DGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVVENCL 192
C GLLYA GG DG + S+++ Y+P+T WS C M+ R + V++ +
Sbjct: 45 AGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVIDGHI 104
Query: 193 YALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMS 252
YA+GG + SVER +P +W V M +RR GVA L+ +Y VGG DGT ++
Sbjct: 105 YAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLN 164
Query: 253 SGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQ 312
S E + RN W I M + RS V + + GG DG LNSVE+YD + W
Sbjct: 165 SAECYYPERNEWRMITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWT 224
Query: 313 LLTPMLTRRSSIGAAVLE 330
+ PM RRS++G V +
Sbjct: 225 FVAPMKHRRSALGITVHQ 242
Score = 47.6 bits (111), Expect = 8e-07
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 281 NIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRSSIGAAVL 329
+ + T GG SL+ +E Y+P W L + RS + V+
Sbjct: 2 KVGRLIYTAGGYF-RQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV 49
>d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain
{Fungi (Fusarium sp.) [TaxId: 29916]}
Length = 387
Score = 68.3 bits (165), Expect = 2e-13
Identities = 25/164 (15%), Positives = 39/164 (23%), Gaps = 15/164 (9%)
Query: 165 PLTGVWSSCPAMTTRRRYCRIAVVENCLYALGGFDSTNY------QASVERLDPRMGKWA 218
P G W + I + + + + DP G +
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 219 PVPSMSSRRS---SCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRNSWEPIAPMLSRRS 275
++ +G I GGND ++ +SW P M R
Sbjct: 66 DRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT----SLYDSSSDSWIPGPDMQVARG 121
Query: 276 THEVVNIEG--YLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPM 317
+ G G + E Y P W L
Sbjct: 122 YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNA 165
Score = 67.9 bits (164), Expect = 2e-13
Identities = 33/246 (13%), Positives = 62/246 (25%), Gaps = 33/246 (13%)
Query: 117 TTKRTQERKPEGMLPYVFAIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAM 176
++ + + T S + G + G + E Y P + W+S P
Sbjct: 106 SSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNA 165
Query: 177 TTRRRYCR----IAVVENCLYALGG-----FDSTNYQASVERLDPRMGKWAPVPSMSSRR 227
+ +N + G F + A G S R
Sbjct: 166 KVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR 225
Query: 228 SSCGVAALDGAIYCVGGNDGTMCMSSGE-----------------RFNVRRNSWEPIAPM 270
A A+ + N+ +
Sbjct: 226 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGL 285
Query: 271 LSRRSTHEVVNI-EGYLLTMGGN------DGSSSLNSVEKYDPKLNKWQLLTPMLTRRSS 323
R+ H V + +G GG + S+ + + E Y P+ + + P R
Sbjct: 286 YFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVY 345
Query: 324 IGAAVL 329
++L
Sbjct: 346 HSISLL 351
Score = 67.9 bits (164), Expect = 3e-13
Identities = 23/196 (11%), Positives = 56/196 (28%), Gaps = 24/196 (12%)
Query: 135 AIGTCSFDGLLYACGGYDGASCLSSMERYDPLTGVWSSCPAMTTRRRYCRIAVV------ 188
A G ++ G + + D + C AV+
Sbjct: 185 AWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKG 244
Query: 189 ------ENCLYALGGFDSTNYQASVERLDPRMGKWAPVPSMS-SRRSSCGVAALDGAIYC 241
+ Y + + ++ + +R V DG+ +
Sbjct: 245 KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFI 304
Query: 242 VGGN------DGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNI--EGYLLTMGGN- 292
GG + + + + E + ++++ P R H + + +G + GG
Sbjct: 305 TGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGL 364
Query: 293 --DGSSSLNSVEKYDP 306
D +++ + + P
Sbjct: 365 CGDCTTNHFDAQIFTP 380
Score = 64.1 bits (154), Expect = 5e-12
Identities = 29/205 (14%), Positives = 54/205 (26%), Gaps = 24/205 (11%)
Query: 142 DGLLYACGGYD------GASCLSSMERYDPLTGVWSSCPAMTTRR-RYCRIAVV--ENCL 192
G + Y ++ +DP TG+ S T+ +C + +
Sbjct: 30 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQI 89
Query: 193 YALGGFDSTNYQASVERLDPRMGKWAPVPSMSSRRSSCG-VAALDGAIYCVGGNDGTMCM 251
GG D+ D W P P M R DG ++ +GG+
Sbjct: 90 VVTGGNDAKK----TSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVF 145
Query: 252 S-SGERFNVRRNSWEPIAPM------LSRRSTHEVVNIEGYLLTMGGN---DGSSSLNSV 301
+GE ++ +W + + + + +L S
Sbjct: 146 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMN 205
Query: 302 EKYDPKLNKWQLLTPMLTRRSSIGA 326
Y + + R
Sbjct: 206 WYYTSGSGDVKSAGKRQSNRGVAPD 230
Score = 62.9 bits (151), Expect = 1e-11
Identities = 15/120 (12%), Positives = 34/120 (28%), Gaps = 13/120 (10%)
Query: 212 PRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTM------CMSSGERFNVRRNSWE 265
P +G+W P + ++ + G + ++ ++
Sbjct: 6 PGLGRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVS 65
Query: 266 PIAPMLSRRSTHE---VVNIEGYLLTMGGNDGSSSLNSVEKYDPKLNKWQLLTPMLTRRS 322
+++ ++ G ++ GGND YD + W M R
Sbjct: 66 DRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA----KKTSLYDSSSDSWIPGPDMQVARG 121
Score = 52.9 bits (125), Expect = 2e-08
Identities = 8/73 (10%), Positives = 17/73 (23%), Gaps = 6/73 (8%)
Query: 262 NSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGS------SSLNSVEKYDPKLNKWQLLT 315
W P + + + G +L + +DP T
Sbjct: 9 GRWGPTIDLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 68
Query: 316 PMLTRRSSIGAAV 328
+T+ +
Sbjct: 69 VTVTKHDMFCPGI 81
>d2f7fa1 c.1.17.1 (A:141-485) Putative nicotinate
phosphoribosyltransferase EF2626 {Enterococcus faecalis
[TaxId: 1351]}
Length = 345
Score = 31.1 bits (70), Expect = 0.19
Identities = 12/42 (28%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 219 PVPSMSSRRSSCGVAALDGAIYC-VGGNDGTMCMSSGERFNV 259
P+ +RR+ AA+ G +GG D T + +G+ F +
Sbjct: 16 PLLEFGTRRAQELDAAIWGTRAAYIGGADATSNVRAGKIFGI 57
>d2i14a1 c.1.17.1 (A:111-389) Nicotinate-nucleotide
pyrophosphorylase PF1904 {Pyrococcus furiosus [TaxId:
2261]}
Length = 279
Score = 30.0 bits (67), Expect = 0.38
Identities = 10/42 (23%), Positives = 15/42 (35%)
Query: 219 PVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVR 260
PV S R +A + +GG DG + E +
Sbjct: 20 PVYSFGIRHMHPAIAPMIDRAAFIGGCDGVSGVLGAEMMGEK 61
>d1v10a2 b.6.1.3 (A:137-304) Laccase {Rigidoporus lignosus [TaxId:
219653]}
Length = 168
Score = 29.3 bits (65), Expect = 0.45
Identities = 15/93 (16%), Positives = 27/93 (29%), Gaps = 13/93 (13%)
Query: 203 YQASVERLDPRMGKWAPVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVRRN 262
Y + L P K P P I +G N +V+
Sbjct: 16 YHSLSTVLFPNPNKAPPAPDT-------------TLINGLGRNSANPSAGQLAVVSVQSG 62
Query: 263 SWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDGS 295
+ + + +I+G+ +T+ DG
Sbjct: 63 KRYRFRIVSTSCFPNYAFSIDGHRMTVIEVDGV 95
>d1ytda1 c.1.17.1 (A:120-389) Nicotinate phosphoribosyltransferase
Ta1145 {Thermoplasma acidophilum [TaxId: 2303]}
Length = 270
Score = 28.8 bits (64), Expect = 0.85
Identities = 8/42 (19%), Positives = 15/42 (35%)
Query: 219 PVPSMSSRRSSCGVAALDGAIYCVGGNDGTMCMSSGERFNVR 260
P S RR ++ + +GG DG + + +
Sbjct: 15 PFFSFGIRRMHPAISPMIDRSAYIGGADGVSGILGAKLIDQD 56
>d2f48a1 c.89.1.1 (A:4-553) Pyrophosphate-dependent
phosphofructokinase {Lyme disease spirochete (Borrelia
burgdorferi) [TaxId: 139]}
Length = 550
Score = 27.7 bits (61), Expect = 2.5
Identities = 8/63 (12%), Positives = 22/63 (34%), Gaps = 2/63 (3%)
Query: 115 LLTTKRTQERKPEGMLPYVFAIGTCSFDGLLYACGG--YDGASCLSSMERYDPLTGVWSS 172
++++ RT+ E +F + + ++ G A+ L+ + +
Sbjct: 138 IVSSGRTKIETEEHYNKALFVAKENNLNAIIIIGGDDSNTNAAILAEYFKKNGENIQVIG 197
Query: 173 CPA 175
P
Sbjct: 198 VPK 200
>d1euwa_ b.85.4.1 (A:) Deoxyuridine 5'-triphosphate
nucleotidohydrolase (dUTPase) {Escherichia coli [TaxId:
562]}
Length = 136
Score = 26.2 bits (57), Expect = 3.7
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Query: 207 VERLDPRMGKWAPVPSMSSRRSSCG--VAALDGAIYCVGGNDGTMCMSSGERFNVRRNSW 264
V+ LDPR+GK P+P+ ++ S+ A L+ A+ G D T+ + +
Sbjct: 7 VKILDPRVGKEFPLPTYATSGSAGLDLRACLNDAVELAPG-DTTLVPTGLAIHIADPSLA 65
Query: 265 EPIAPMLSRRSTH 277
+ P H
Sbjct: 66 AMMLPRSGLGHKH 78
>d1t1ua2 c.43.1.3 (A:402-616) Choline O-acetyltransferase {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 215
Score = 26.0 bits (57), Expect = 5.5
Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 28/100 (28%)
Query: 33 LVFYKYPLYGRPAVNSSCGNYILPTAWVSVALQL--------------LRHVKLPLLARD 78
+ YK+ YG+ + P ++ VALQL ++ R
Sbjct: 2 FIVYKFDNYGKTFIKK-QK--YSPDGFIQVALQLAYYRLYQRLVPTYESASIRRFQEGRV 58
Query: 79 FLMNSVESESLI-----------KESTECQELLLEAMKYH 107
+ S E+L ++E +LL AM+
Sbjct: 59 DNIRSATPEALAFVQAMTDHKAAMPASEKLQLLQTAMQAQ 98
>d1gyca2 b.6.1.3 (A:131-300) Laccase {Trametes versicolor, laccase 2
[TaxId: 5325]}
Length = 170
Score = 25.8 bits (56), Expect = 5.7
Identities = 9/51 (17%), Positives = 19/51 (37%)
Query: 244 GNDGTMCMSSGERFNVRRNSWEPIAPMLSRRSTHEVVNIEGYLLTMGGNDG 294
G + ++ NV+ + + +I+G+ LT+ DG
Sbjct: 45 GRSASTPTAALAVINVQHGKRYRFRLVSISCDPNYTFSIDGHNLTVIEVDG 95
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.135 0.415
Gapped
Lambda K H
0.267 0.0610 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,286,807
Number of extensions: 58234
Number of successful extensions: 149
Number of sequences better than 10.0: 1
Number of HSP's gapped: 132
Number of HSP's successfully gapped: 27
Length of query: 347
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 261
Effective length of database: 1,226,816
Effective search space: 320198976
Effective search space used: 320198976
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.5 bits)