BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11774
(304 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30
PE=2 SV=1
Length = 1220
Score = 197 bits (501), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 149/238 (62%), Gaps = 10/238 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 687 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 746
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 747 PIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 806
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +MA + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 807 GRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 862
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 863 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 920
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 197 bits (500), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/231 (44%), Positives = 147/231 (63%), Gaps = 10/231 (4%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPG-----LLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PG ILCFLPGWQ+I V + L + G LV HS + Q IF PPPG+RK+
Sbjct: 711 PGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKI 770
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+S+++V QR GRAGR +
Sbjct: 771 VLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQ 830
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLPEPP 198
G ++HL+ R +M Y +PEI R PLE +++ K+ + E+ + FLS+ + P
Sbjct: 831 SGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKI----HMPEKTAVEFLSKALDSP 886
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
D ++ A L+ +GV DQ E LT LGKR+A + P+L+KA+V + IY+
Sbjct: 887 DIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYR 937
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 196 bits (498), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/238 (42%), Positives = 148/238 (62%), Gaps = 10/238 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 195 bits (495), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 148/238 (62%), Gaps = 10/238 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 195 bits (495), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 148/238 (62%), Gaps = 10/238 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 684 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 743
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 744 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 803
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 804 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 859
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 860 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 917
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 194 bits (493), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 100/238 (42%), Positives = 147/238 (61%), Gaps = 10/238 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETS TI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFR 894
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 181 bits (459), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 139/228 (60%), Gaps = 9/228 (3%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 482 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV 541
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 542 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 601
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 602 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSN 657
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 658 EAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 705
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 181 bits (458), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/228 (38%), Positives = 139/228 (60%), Gaps = 9/228 (3%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 489 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIV 548
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 549 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 608
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 609 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSN 664
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 665 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 712
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 169 bits (428), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 140/234 (59%), Gaps = 10/234 (4%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL--------LVTMAHSKLDTEVQGAIFGHPPPGM 76
PGA+L FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 849 PGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGV 908
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 909 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 968
Query: 137 RTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++ST S S+L
Sbjct: 969 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFSRLI 1027
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFR 1081
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 168 bits (426), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 139/234 (59%), Gaps = 10/234 (4%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL--------LVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
Query: 137 RTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++S S S+L
Sbjct: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSAHNLQSVFSRLI 1025
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1026 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR 1079
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 167 bits (422), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/232 (40%), Positives = 136/232 (58%), Gaps = 16/232 (6%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS+ V HS L T+ Q A F PPPG+RK+V
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIV 926
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 927 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 986
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F LY+ +R+ +YS+PEI R PLE++ ++ C +G FLS+ +P
Sbjct: 987 GFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLGSP-------EDFLSKALDP 1039
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1040 PQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1091
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus
GN=Ythdc2 PE=2 SV=1
Length = 1445
Score = 166 bits (421), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 138/245 (56%), Gaps = 12/245 (4%)
Query: 13 FFYSTHFPCPSFPGAILCFLPGWQDIIQV--------SRVLSAIPGLLVTMAHSKLDTEV 64
Y+ C + GAIL FLPG+ +I+ + R V M HS + T
Sbjct: 627 LLYNICHSCDA--GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSD 684
Query: 65 QGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWIS 124
Q + +PP G+RK++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS
Sbjct: 685 QKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWIS 744
Query: 125 RASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYST 184
+AS QR GRAGR +PG F L+S R++ M E+ PE+ R PL+++ L K+ + T
Sbjct: 745 KASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCT 804
Query: 185 ERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVE 244
+ FL + PEPP + +A LK + D E+LT LG +A +P P L K ++
Sbjct: 805 --IADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLC 862
Query: 245 SVIYK 249
+V+ K
Sbjct: 863 AVVLK 867
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens
GN=YTHDC2 PE=1 SV=2
Length = 1430
Score = 165 bits (418), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/247 (36%), Positives = 139/247 (56%), Gaps = 16/247 (6%)
Query: 13 FFYSTHFPCPSFPGAILCFLPGWQDIIQV--------SRVLSAIPGLLVTMAHSKLDTEV 64
Y+ C + GA+L FLPG+ +I+ + R + V M HS + T
Sbjct: 612 LLYNICHSCDA--GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSD 669
Query: 65 QGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWIS 124
Q + +PP G+RK++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS
Sbjct: 670 QKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWIS 729
Query: 125 RASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYST 184
+AS QR GRAGR +PG F L+S R++ M E+ PE+ R PL+++ L K L +
Sbjct: 730 KASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAP 785
Query: 185 ERC--SSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKAL 242
C + FL + PEPP + +A LK + D E+LT LG +A +P P L K +
Sbjct: 786 VNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMV 845
Query: 243 VESVIYK 249
+ +V+ K
Sbjct: 846 LCAVVLK 852
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 136/235 (57%), Gaps = 16/235 (6%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMR 77
+ GA+L FLPG I Q+ +LS V HS L T+ Q A F PPPG+R
Sbjct: 865 NIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVR 924
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K+VL+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR
Sbjct: 925 KIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGR 984
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQL 194
+ G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G FLS+
Sbjct: 985 VRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLGSP-------EDFLSKA 1037
Query: 195 PEPPDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1038 LDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 17/238 (7%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSAIP------GLLVTMAHSKLDTEVQGAIFGHPPPG 75
P F +L FLPG +I++V ++ +P + M HS L + Q ++F PP G
Sbjct: 900 PKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKG 959
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
RK+VLSTN+AET +TI DV V+DTG H+E RYNS+ L L + ++S+A+ QR+GRA
Sbjct: 960 CRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRA 1019
Query: 136 GRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILL---TCKVGESLYSTERCSSFL 191
GR + G +HL+S+ ++ + Y PEI R L++++L C++G+ L
Sbjct: 1020 GRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGD-------VQDVL 1072
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+ +PP +I A +L +G + E LT LGK ++ +P L K LV YK
Sbjct: 1073 GKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYK 1130
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 162 bits (410), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 136/234 (58%), Gaps = 19/234 (8%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGL-------LVTMAHSKLDTEVQGAIFGHPPPGMRK 78
GA+L FLPG DI Q+ +LS+ L+ + HS L ++ Q F PP G RK
Sbjct: 862 GAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIAL-HSILSSQDQAEAFILPPAGTRK 920
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TN+AET ITI DV +V+D G KE RY+ + SL +IS+AS QR GRAGR
Sbjct: 921 IVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFISKASALQRQGRAGRV 980
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLP 195
+ G F LY+ +R+ EYS+PEI R PLE++ ++ C +G FLS+
Sbjct: 981 RNGYCFRLYTRERFESFMEYSVPEILRVPLEELCLHIMKCDLGSP-------EDFLSKAL 1033
Query: 196 EPPDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP I++A + L+ +G + + LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1034 DPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1087
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 160 bits (405), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 10/238 (4%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
+ PGA+L FLPGW I + + L P + HS++ + Q +F P G+
Sbjct: 650 NVPGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGII 709
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+LSTN+AETSITI+DV YV+D+ K + S +++ + W S+ ++ QR GRAGR
Sbjct: 710 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGR 769
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG FHL S+ R+ ++ + PEIFR PL ++ L+ K L FLS+ EP
Sbjct: 770 VRPGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIK----LLRLGGIGHFLSKAIEP 825
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
P ++ A L+ + D + LTPLG+ +A +P P+L K ++ I Y G+ C
Sbjct: 826 PPLDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALC 883
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 160 bits (404), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
+ PGA+L FLPGW I + + L P + HS++ E Q +F P G+
Sbjct: 648 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVT 707
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR
Sbjct: 708 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EP
Sbjct: 768 VRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEP 823
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
P ++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 824 PPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 881
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
+ PGA+L FLPGW I + + L P + HS++ E Q +F P G+
Sbjct: 645 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVT 704
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K++LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR
Sbjct: 705 KIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 764
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EP
Sbjct: 765 VRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEP 820
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
P ++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 821 PPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 878
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 159 bits (403), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 130/238 (54%), Gaps = 10/238 (4%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
+ PGA+L FLPGW I + + L P + HS++ E Q +F P G+
Sbjct: 648 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVT 707
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR
Sbjct: 708 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 767
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EP
Sbjct: 768 VRPGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEP 823
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
P ++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 824 PPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 881
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/238 (36%), Positives = 129/238 (54%), Gaps = 10/238 (4%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
+ PGA+L FLPGW I + + L + HS++ E Q +F P G+
Sbjct: 650 NVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVT 709
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR
Sbjct: 710 KVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGR 769
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EP
Sbjct: 770 VRPGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEP 825
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
P +I A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 826 PPLDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVC 883
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 128/230 (55%), Gaps = 15/230 (6%)
Query: 26 GAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G ++I + L +P L++ +S L +E+Q IF PPPG R
Sbjct: 724 GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKR 783
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVV++TN+AE S+TID + YVVD G K+ YN K L SL IS+AS QRAGRAGR
Sbjct: 784 KVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGR 843
Query: 138 TKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ + LY+E YR M S+PEI R L LT K SF +
Sbjct: 844 TGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKA----MGINDLLSF--DFMD 897
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP P ++ SA +L +G D+E LT LG+++A P P LSK L+ SV
Sbjct: 898 PPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASV 947
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle
PE=2 SV=2
Length = 1293
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 10/237 (4%)
Query: 18 HFPCPSFPGAILCFLPGWQDI------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGH 71
H + PGAIL FLPGW I +Q + + + HS++ + Q +F
Sbjct: 646 HIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEP 705
Query: 72 PPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQR 131
P G+ K++LSTN+AETSITIDD+ +V+D + + S ++L S W S+ ++ QR
Sbjct: 706 VPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQR 765
Query: 132 AGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFL 191
GRAGR +PG F L S R++ + + PE+FR PL ++ LT K L FL
Sbjct: 766 KGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIK----LLRLGSIHHFL 821
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
S+ EPP ++ A L+ M D + LTPLG+ +A +P P+L K +V ++
Sbjct: 822 SKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVF 878
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 151 bits (382), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 133/231 (57%), Gaps = 15/231 (6%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I ++L S +P L++ +S L +E+Q IF PPG
Sbjct: 716 PGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS 775
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YV+D G K+ +N K+ + SL IS+A+ QR+GRAG
Sbjct: 776 RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAG 835
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E ++ M S+PEI R L +LT K +F
Sbjct: 836 RTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKA----MGINDLLNF--DFM 889
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP ++ SA +L +G D+E LT LG+++A P P+LSK L+ SV
Sbjct: 890 DPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASV 940
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 146 bits (369), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 125/233 (53%), Gaps = 22/233 (9%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGL-------LVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G +L FL G + ++S VL A +V HS L Q +F PPG+RK
Sbjct: 379 GDLLVFLSG---MAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 435
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GRAGRT
Sbjct: 436 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK---VGESLYSTERCSSFLSQLP 195
PG F LY+E Y A Y +PEI R L+ ++L K VG+ R F+
Sbjct: 496 GPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMKSMSVGDP-----RTFPFI---- 546
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+ ++
Sbjct: 547 EPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 599
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 123/234 (52%), Gaps = 16/234 (6%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSAIPGL----LVTMAHSKLDTEVQGAIFGHPPPGMR 77
P G +L FL G +I V A L +V HS L Q +F P G+R
Sbjct: 377 PEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVR 436
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GRAGR
Sbjct: 437 KCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGR 496
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK---VGESLYSTERCSSFLSQL 194
T PG + LY+E Y A Y +PEI R L+ ++L K VG+ R F+
Sbjct: 497 TGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMKSMSVGDP-----RTFPFI--- 548
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+ ++
Sbjct: 549 -EPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMF 601
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 145 bits (367), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 90/231 (38%), Positives = 128/231 (55%), Gaps = 15/231 (6%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L +IP L++ +S L +E+Q IF PPG
Sbjct: 719 PGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGG 778
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K++ ++ K + SL IS+A QR+GRAG
Sbjct: 779 RKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAG 838
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M +PEI R+ L +L K +F
Sbjct: 839 RTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKA----MGINDLLNF--DFM 892
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP ++ +A L + D E LTPLG+++A P P+LSK L+ SV
Sbjct: 893 DPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSV 943
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 144 bits (364), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 125/231 (54%), Gaps = 15/231 (6%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSA--------IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L +P L++ +S L +E+Q IF PPG
Sbjct: 773 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 832
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 833 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 892
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF--DFM 946
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+ P ++ +A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 947 DAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 997
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 144 bits (364), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 125/231 (54%), Gaps = 15/231 (6%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSA--------IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L +P L++ +S L +E+Q IF PPG
Sbjct: 797 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 856
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 857 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 916
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF
Sbjct: 917 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF--DFM 970
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+ P ++ +A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 971 DAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 1021
>sp|Q9P774|PRP16_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp16 PE=3 SV=2
Length = 1173
Score = 142 bits (359), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 134/240 (55%), Gaps = 16/240 (6%)
Query: 18 HFPCPSFPGAILCFLPGWQDI-----IQVSRV--LSAIPGLLVTMAHSKLDTEVQGAIFG 70
H P+ G IL F+ G +DI I R+ L P L + +S++ ++Q IF
Sbjct: 695 HLSQPA--GDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFD 752
Query: 71 HPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQ 130
PG+RKVV++TN+AETS+T+ ++YVVDTG K YNSK + +L IS+A+ NQ
Sbjct: 753 SAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQ 812
Query: 131 RAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSS 189
RAGRAGRT PG ++ LY+E Y R M E +LPEI R L +L K E S
Sbjct: 813 RAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILKS----LGVEEISD 868
Query: 190 FLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
F + PP+ ++ ++ EL +G D LT LGK+++ P P LSK ++ + YK
Sbjct: 869 F-DFMDRPPND-TLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYK 926
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 91/231 (39%), Positives = 122/231 (52%), Gaps = 15/231 (6%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L +I LL+ +S L +E+Q IF P G
Sbjct: 691 PGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS 750
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV +TN+AETSITID + YVVD G K YN++ + L IS+A NQR GRAG
Sbjct: 751 RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAG 810
Query: 137 RTKPGESFHLYSEDR-YRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E Y M E ++PEI R+ L +L K F
Sbjct: 811 RTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKA----MGINDLLKF--DFM 864
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP + +A TEL + D E LT LGK ++ P P LS++L+ SV
Sbjct: 865 DPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSV 915
>sp|Q54MH3|DHX16_DICDI Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Dictyostelium discoideum GN=dhx16 PE=3 SV=1
Length = 1106
Score = 141 bits (355), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 84/233 (36%), Positives = 128/233 (54%), Gaps = 15/233 (6%)
Query: 26 GAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G +++ Q + +L + I L++T +S L T++Q IF PP R
Sbjct: 676 GDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNAR 735
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVVL+TN+AETS+TID + YV+D G K+ +N + + SL +SRAS NQR GRAGR
Sbjct: 736 KVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGR 795
Query: 138 TKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
PG+ F L++ + + E ++PEI R L ++L K +F +
Sbjct: 796 VAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKS----MGINDLMNF--DFMD 849
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PP ++ +A +L +G + LT LG+++A P P+LSK ++ S YK
Sbjct: 850 PPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYK 902
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECM16 PE=1
SV=1
Length = 1267
Score = 138 bits (348), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 136/255 (53%), Gaps = 20/255 (7%)
Query: 51 LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYN 110
L V +S L T+ Q +F PP G R +++TNVAETS+TI V YVVD+G KE +YN
Sbjct: 729 LYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYN 788
Query: 111 SKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLE 169
+ + S + W+S+AS NQR+GRAGRT PG + LYS + ++S PEI R P+E
Sbjct: 789 ESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVE 848
Query: 170 QILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRI 229
I+L K + +F P PPD +++ A L+ +G D +E +T GK++
Sbjct: 849 SIVLQMKS----MAIHNIINF--PFPTPPDRVALSKAIQLLQYLGALDNKEMITEDGKKM 902
Query: 230 AAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSKREGRQDRRKPAAPLFQFYSSKI---- 285
+ P P+ SK L+ V + C Y + + + G P F+ ++I
Sbjct: 903 SLFPLSPRFSKMLL--VSDEKACLPYIVAIVSALSVG-----DPFINEFELGINEISRKP 955
Query: 286 --DETRNEKMREEDE 298
DE ++K+RE DE
Sbjct: 956 NPDENLDDKIREHDE 970
>sp|O45244|DHX16_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4
OS=Caenorhabditis elegans GN=mog-4 PE=1 SV=2
Length = 1008
Score = 137 bits (346), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 89/242 (36%), Positives = 130/242 (53%), Gaps = 18/242 (7%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIF 69
H P PG IL FL G ++I V L S I L+ ++ L +++Q IF
Sbjct: 568 HLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIF 626
Query: 70 GHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
P RKVVL+TN+AETS+TID + YV+D G K+ ++++ + L IS+A+ N
Sbjct: 627 EPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAAN 686
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS 188
QRAGRAGRT PG+ F LY+ Y+ + E +PEI R L ++L K SL +
Sbjct: 687 QRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLK---SLGIHDLVH 743
Query: 189 -SFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI 247
FL +PP ++ A +L +G + LT LG+R+A PC P +SK ++ S
Sbjct: 744 FDFL----DPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEK 799
Query: 248 YK 249
Y+
Sbjct: 800 YE 801
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 95/256 (37%), Positives = 136/256 (53%), Gaps = 22/256 (8%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVS-------RVLSA-IPGLLVTM 55
NY+ TT H P+ G IL FL G +I +S R+L IP +++
Sbjct: 609 NYIQAAITTIL-QIHTTQPA--GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCP 665
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L +E+Q IF PPG RKVVL+TN+AETSITID V +V+D+G K+ YN + +
Sbjct: 666 IYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGM 725
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLT 174
SL + SRAS +QRAGRAGR PG+ F LY+ Y + + PEI R L I+L
Sbjct: 726 ESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLL 785
Query: 175 CK-VGESLYSTERCSSFLS-QLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAM 232
K +G ++ L + P P ++ + L +G + LT LG+++A
Sbjct: 786 LKSLG--------INNLLDFDFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEF 837
Query: 233 PCHPKLSKALVESVIY 248
P P LSK+L+ S Y
Sbjct: 838 PTDPMLSKSLIASSKY 853
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 87/224 (38%), Positives = 127/224 (56%), Gaps = 11/224 (4%)
Query: 26 GAILCFLPGWQDIIQV-SRVL-----SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GA+L FLPGW +I+ + +R+L + HS+L ++ Q +F H P G RK+
Sbjct: 660 GAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKI 718
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
++STN+AETSITIDDV YV+D+ KE Y S +++V W S+ +V QR GRAGR +
Sbjct: 719 IVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVR 778
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G +FHL S+ R+ + ++ E+ R PL QI LT K L FL + +PP
Sbjct: 779 AGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIK----LLRLGSVGEFLGKALQPPP 834
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
+ + L+ MG D+ LT LGK +A MP P ++K L+
Sbjct: 835 YDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLI 878
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 134 bits (337), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 128/252 (50%), Gaps = 18/252 (7%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSA--------IPGLLVTM 55
+YL T H P PG +L FL G ++I VL +P L++
Sbjct: 730 DYLEAAHITVM-QIHLTEP--PGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILP 786
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
+ L +E+Q IF P G RKVV++TN+AETS+TID + YVVD G K+ YN K +
Sbjct: 787 VYGALPSEMQTRIFDPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGM 846
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLT 174
SL IS+A+ QR+GRAGRT PG+ + LY+E +R M +PEI R L LL
Sbjct: 847 DSLVVTPISQAAAKQRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQ 906
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
K F + PP + IT+ T L + D + LT LG+R+A P
Sbjct: 907 LKA----MGINNLIDF-DFMDAPPLDSMITALNT-LHTLSALDGDGLLTKLGRRMAEFPL 960
Query: 235 HPKLSKALVESV 246
P LSK L+ SV
Sbjct: 961 EPSLSKLLIMSV 972
>sp|Q9H6R0|DHX33_HUMAN Putative ATP-dependent RNA helicase DHX33 OS=Homo sapiens GN=DHX33
PE=1 SV=2
Length = 707
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/256 (35%), Positives = 132/256 (51%), Gaps = 25/256 (9%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVTM 55
+YL+ + F H PS IL FL G ++I +S+ I P +LV
Sbjct: 269 DYLHAALVSVF-QIHQEAPS-SQDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLP 326
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN L
Sbjct: 327 LYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGL 386
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---L 172
L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L + L
Sbjct: 387 EVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQL 446
Query: 173 LTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKRI 229
L KV L F+S+ P P I +A +L L+G + +++ LTP+G+++
Sbjct: 447 LAMKVPNVL-----TFDFMSK----PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKM 497
Query: 230 AAMPCHPKLSKALVES 245
AA P PK +K ++ S
Sbjct: 498 AAFPLEPKFAKTILMS 513
>sp|Q80VY9|DHX33_MOUSE Putative ATP-dependent RNA helicase DHX33 OS=Mus musculus GN=Dhx33
PE=1 SV=1
Length = 698
Score = 130 bits (328), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 133/257 (51%), Gaps = 25/257 (9%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVT 54
++YL+ + F H P+ IL FL G ++I +S+ I P +LV
Sbjct: 259 QDYLHAALVSVF-QIHQEAPA-SQDILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVL 316
Query: 55 MAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDD 114
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN
Sbjct: 317 PLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSG 376
Query: 115 LVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI--- 171
L L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L +
Sbjct: 377 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQ 436
Query: 172 LLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKR 228
LL KV L F+S+ P P I +A +L L+G + +++ LTP+G++
Sbjct: 437 LLAMKVPNVL-----TFDFMSK----PSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRK 487
Query: 229 IAAMPCHPKLSKALVES 245
+AA P P+ +K ++ S
Sbjct: 488 MAAFPLEPRFAKTILLS 504
>sp|Q92620|PRP16_HUMAN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Homo
sapiens GN=DHX38 PE=1 SV=2
Length = 1227
Score = 130 bits (326), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 138 TKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K + F +
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS----LGVQDLLQF--HFMD 913
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 914 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
>sp|Q17R09|PRP16_BOVIN Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 OS=Bos
taurus GN=DHX38 PE=2 SV=1
Length = 1227
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 77/229 (33%), Positives = 125/229 (54%), Gaps = 14/229 (6%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 138 TKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K + F +
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLKS----LGVQDLLQF--HFMD 913
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 914 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 129 bits (325), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 13/252 (5%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL---SAIPGLLVTMAHSKL 60
NY Q + + G+I+ FLPG +I + +L S +V HS L
Sbjct: 842 NYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSAL 901
Query: 61 DTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDN 120
E Q +F G RKVV+STN+AETSITIDD +DTG K YN KD+ L
Sbjct: 902 TPEDQKRVF-KKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIE 960
Query: 121 QWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGE 179
+IS+A V QR GRAGR + G S+ L+S++ Y M +PEI R PLE + L+ K
Sbjct: 961 SFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKA-- 1018
Query: 180 SLYSTERCSSFLSQ-LPEPPDPASITSAATELKLMGVFDQ-EENLTPLGKRIAAMPC-HP 236
+ +FLS L PP PA + A L +G+ D+ +++LT LG+ I+ MP
Sbjct: 1019 --MGIKDVKAFLSTALDAPPLPA-LQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDS 1075
Query: 237 KLSKALVESVIY 248
K K L+ +++
Sbjct: 1076 KHGKLLIYGILF 1087
>sp|P34498|MOG1_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1
OS=Caenorhabditis elegans GN=mog-1 PE=1 SV=2
Length = 1131
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 14/229 (6%)
Query: 26 GAILCFLPGWQDIIQVSRV-------LSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G IL F+PG +DI + L P L V +S+L +++Q IF P GMRK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+++TN+AETS+T+D + +V+D G K YN + + +L +S+AS NQR GRAGRT
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG+ + LY+E +++ + + ++PEI R L ++L K SL + P P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLK---SLGVDDLLKFHFMDAP-P 826
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
D ++ ++ +L +G D LTP+G+++ P P LSK L+ S
Sbjct: 827 QD--NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMSA 873
>sp|O17438|DHX15_STRPU Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
(Fragment) OS=Strongylocentrotus purpuratus GN=PRP1 PE=2
SV=1
Length = 455
Score = 129 bits (324), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/243 (35%), Positives = 121/243 (49%), Gaps = 21/243 (8%)
Query: 21 CPSFPGAILCFLPGWQDI--------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHP 72
C G +L FL G ++I +V + + L +S L +Q IF H
Sbjct: 113 CEEVEGDVLLFLTGQEEIEEACKRIKREVDNLGPEVGDLKTIPLYSTLPPAMQQRIFEHA 172
Query: 73 PPGM------RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRA 126
PP RKVV+STN+AETS+TID V +V+D G K+ YN + + SL IS+A
Sbjct: 173 PPNKANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKA 232
Query: 127 SVNQRAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTE 185
S QR GRAGRT+PG+ F LY+E Y M + + PEI R L ++L K +
Sbjct: 233 SAQQRVGRAGRTRPGKCFRLYTEKAYDSEMQDNTYPEILRSNLGTVVLQLKK----LGID 288
Query: 186 RCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F +PP P ++ A L +G D +LT LG +A P P+L+K ++ S
Sbjct: 289 DLVHF--DFMDPPAPETLMRALELLNYLGALDDSGDLTRLGSMMAEFPLDPQLAKMVIAS 346
Query: 246 VIY 248
Y
Sbjct: 347 TDY 349
>sp|O22899|DHX15_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1
Length = 729
Score = 128 bits (321), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 123/237 (51%), Gaps = 22/237 (9%)
Query: 25 PGAILCFLPGWQDI--------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPP--- 73
PG IL FL G ++I +VS + + + V +S L +Q IF P
Sbjct: 279 PGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPL 338
Query: 74 ----PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
P RK+V+STN+AETS+TID + YV+D G K+ YN + + SL IS+AS +
Sbjct: 339 TEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAH 398
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS 188
QR+GRAGRT+PG+ F LY+E + + + PEI R L +LT K +
Sbjct: 399 QRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKK----LGIDDLV 454
Query: 189 SFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F +PP P ++ A L +G D E NLT G+ ++ P P++SK L+ S
Sbjct: 455 HF--DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVS 509
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 17/234 (7%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQL 194
R G+ F LY+ Y+ + E ++PEI R L ++L K SL + FL
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK---SLGIHDLMHFDFL--- 785
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 786 -DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 838
>sp|Q7YR39|DHX16_PANTR Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Pan troglodytes GN=DHX16 PE=3 SV=1
Length = 1044
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 17/234 (7%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 611 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 730
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQL 194
R G+ F LY+ Y+ + E ++PEI R L ++L K SL + FL
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK---SLGIHDLMHFDFL--- 784
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 785 -DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 837
>sp|O60231|DHX16_HUMAN Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Homo sapiens GN=DHX16 PE=1 SV=2
Length = 1041
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 17/234 (7%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 608 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 667
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 668 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 727
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQL 194
R G+ F LY+ Y+ + E ++PEI R L ++L K SL + FL
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK---SLGIHDLMHFDFL--- 781
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 782 -DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 834
>sp|O42945|DHX15_SCHPO Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp43 PE=3 SV=1
Length = 735
Score = 127 bits (319), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/237 (36%), Positives = 120/237 (50%), Gaps = 22/237 (9%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS----------AIPGLLVTMAHSKLDTEVQGAIFGHPPP 74
PG IL FL G ++I R ++ A L V + L Q IF P
Sbjct: 285 PGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIFEPTPE 344
Query: 75 GM-----RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
RKVV+STN+AETS+TID + YVVD G K+ YN + + SL IS+AS
Sbjct: 345 DTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQ 404
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS 188
QRAGRAGRT+PG+ F LY+E+ +R+ + E + PEI R L +L K +
Sbjct: 405 QRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKK----LGIDDLV 460
Query: 189 SFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F +PP P ++ A EL + D +LTPLG++ + P P L+ L+ S
Sbjct: 461 HF--DYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRS 515
>sp|Q5RAZ4|DHX15_PONAB Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
OS=Pongo abelii GN=DHX15 PE=2 SV=2
Length = 795
Score = 126 bits (317), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 127/248 (51%), Gaps = 23/248 (9%)
Query: 21 CPSFPGAILCFLPGWQDIIQVSRVLS--------AIPGLLVTMAHSKLDTEVQGAIFGHP 72
C G +L FL G ++I + + + + + + +S L + Q IF P
Sbjct: 345 CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPP 404
Query: 73 PPGM------RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRA 126
PP RKVV+STN+AETS+TID V +V+D G K+ YN + + SL IS+A
Sbjct: 405 PPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKA 464
Query: 127 SVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTE 185
S QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R L ++L K +
Sbjct: 465 SAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKK----LGID 520
Query: 186 RCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F +PP P ++ A L + + + +LT LG +A P P+L+K ++ S
Sbjct: 521 DLVHF--DFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIAS 578
Query: 246 VIYKGNCN 253
Y NC+
Sbjct: 579 CDY--NCS 584
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,675,769
Number of Sequences: 539616
Number of extensions: 4737541
Number of successful extensions: 13632
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 118
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 13341
Number of HSP's gapped (non-prelim): 191
length of query: 304
length of database: 191,569,459
effective HSP length: 117
effective length of query: 187
effective length of database: 128,434,387
effective search space: 24017230369
effective search space used: 24017230369
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)