Your job contains 1 sequence.
>psy11774
MFRNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGLLVTMAHSKL
DTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDN
QWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGES
LYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSK
ALVESVIYKGNCNCYGLIVPKSKREGRQDRRKPAAPLFQFYSSKIDETRNEKMREEDEEE
KRRR
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy11774
(304 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 484 6.4e-45 1
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 484 6.4e-45 1
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 483 8.4e-45 1
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 483 8.4e-45 1
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 481 1.2e-44 1
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 481 1.3e-44 1
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 481 1.3e-44 1
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 480 1.5e-44 1
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 480 1.7e-44 1
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 480 1.7e-44 1
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 479 2.1e-44 1
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 479 2.1e-44 1
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 479 2.2e-44 1
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 479 2.2e-44 1
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 477 3.4e-44 1
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 476 4.5e-44 1
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 460 2.1e-42 1
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 443 1.3e-40 1
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 439 1.3e-40 1
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 445 1.5e-40 1
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 440 2.1e-40 1
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 441 2.1e-40 1
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 440 2.2e-40 1
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 439 2.7e-40 1
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 439 2.8e-40 1
UNIPROTKB|I3LRK0 - symbol:I3LRK0 "Uncharacterized protein... 427 4.2e-40 1
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 434 9.0e-40 1
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 435 1.3e-39 1
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 435 1.5e-39 1
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 431 1.9e-39 1
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 425 8.5e-39 1
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 421 2.3e-38 1
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 415 2.4e-38 1
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 421 3.9e-38 1
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 421 4.4e-38 1
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 421 4.8e-38 1
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 419 7.0e-38 1
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 419 7.5e-38 1
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 417 1.2e-37 1
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 416 1.4e-37 1
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 416 1.5e-37 1
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 416 1.5e-37 1
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 415 1.9e-37 1
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 415 1.9e-37 1
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 415 1.9e-37 1
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 413 3.1e-37 1
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 410 6.4e-37 1
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 410 6.4e-37 1
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 407 8.0e-37 1
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 409 8.6e-37 1
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 407 1.3e-36 1
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 403 2.0e-36 1
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 402 2.2e-36 1
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 405 2.4e-36 1
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 405 2.4e-36 1
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 402 3.4e-36 1
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 403 3.8e-36 1
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 402 4.4e-36 1
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 402 4.6e-36 1
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 399 5.0e-36 1
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 400 7.5e-36 1
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 400 7.5e-36 1
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 400 7.5e-36 1
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 397 1.6e-35 1
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 396 1.7e-35 1
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 393 2.3e-35 1
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 395 2.9e-35 1
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 394 2.9e-35 1
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 393 3.7e-35 1
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 393 4.5e-35 1
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 392 4.7e-35 1
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 392 4.7e-35 1
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 392 4.8e-35 1
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 392 4.8e-35 1
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 391 6.1e-35 1
TAIR|locus:2088847 - symbol:AT3G26560 species:3702 "Arabi... 390 6.7e-35 1
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 386 2.1e-34 1
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 383 3.8e-34 1
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 384 3.9e-34 1
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 381 7.3e-34 1
DICTYBASE|DDB_G0291183 - symbol:dhx8 "putative RNA splici... 375 2.6e-33 1
CGD|CAL0004768 - symbol:PRP22 species:5476 "Candida albic... 373 3.2e-33 1
CGD|CAL0004556 - symbol:orf19.2090 species:5476 "Candida ... 371 8.2e-33 1
UNIPROTKB|G4NFJ0 - symbol:MGG_08807 "Pre-mRNA-splicing fa... 369 1.2e-32 1
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 368 1.4e-32 1
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 367 1.8e-32 1
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 366 2.3e-32 1
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 366 2.5e-32 1
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 365 3.0e-32 1
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 364 3.9e-32 1
POMBASE|SPAC10F6.02c - symbol:prp22 "ATP-dependent RNA he... 362 6.5e-32 1
UNIPROTKB|F1P306 - symbol:LOC100858239 "Uncharacterized p... 361 8.4e-32 1
UNIPROTKB|F5H658 - symbol:DHX8 "ATP-dependent RNA helicas... 361 8.5e-32 1
RGD|1310723 - symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box pol... 361 8.9e-32 1
ZFIN|ZDB-GENE-050809-39 - symbol:dhx8 "DEAH (Asp-Glu-Ala-... 361 8.9e-32 1
UNIPROTKB|F1S1H3 - symbol:DHX8 "Uncharacterized protein" ... 361 8.9e-32 1
UNIPROTKB|E2R9R9 - symbol:DHX8 "Uncharacterized protein" ... 361 8.9e-32 1
UNIPROTKB|Q14562 - symbol:DHX8 "ATP-dependent RNA helicas... 361 9.0e-32 1
UNIPROTKB|F1MEM4 - symbol:DHX8 "Uncharacterized protein" ... 361 9.1e-32 1
UNIPROTKB|D4A805 - symbol:Dhx8 "Protein Dhx8" species:101... 361 9.3e-32 1
WARNING: Descriptions of 197 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 484 (175.4 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 102/238 (42%), Positives = 149/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 687 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 746
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 747 PIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 806
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +MA + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 807 GRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 862
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 863 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 920
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 484 (175.4 bits), Expect = 6.4e-45, P = 6.4e-45
Identities = 102/238 (42%), Positives = 149/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 687 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 746
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 747 PIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 806
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +MA + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 807 GRAGRCQSGFAYHLFPRSRLEKMAPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 862
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 863 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 920
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 483 (175.1 bits), Expect = 8.4e-45, P = 8.4e-45
Identities = 102/231 (44%), Positives = 147/231 (63%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPG-----LLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PG ILCFLPGWQ+I V + L + G LV HS + Q IF PPPG+RK+
Sbjct: 711 PGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKI 770
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+S+++V QR GRAGR +
Sbjct: 771 VLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQ 830
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLPEPP 198
G ++HL+ R +M Y +PEI R PLE +++ K+ + E+ + FLS+ + P
Sbjct: 831 SGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKI----HMPEKTAVEFLSKALDSP 886
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
D ++ A L+ +GV DQ E LT LGKR+A + P+L+KA+V + IY+
Sbjct: 887 DIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYR 937
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 483 (175.1 bits), Expect = 8.4e-45, P = 8.4e-45
Identities = 102/231 (44%), Positives = 147/231 (63%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPG-----LLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PG ILCFLPGWQ+I V + L + G LV HS + Q IF PPPG+RK+
Sbjct: 711 PGGILCFLPGWQEIKGVQQRLLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKI 770
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+S+++V QR GRAGR +
Sbjct: 771 VLATNIAETSITINDIVHVVDSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQ 830
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLPEPP 198
G ++HL+ R +M Y +PEI R PLE +++ K+ + E+ + FLS+ + P
Sbjct: 831 SGFAYHLFPRSRLDKMPTYQVPEILRTPLENLVVQAKI----HMPEKTAVEFLSKALDSP 886
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
D ++ A L+ +GV DQ E LT LGKR+A + P+L+KA+V + IY+
Sbjct: 887 DIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPRLAKAIVLASIYR 937
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 481 (174.4 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 101/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 633 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 692
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 693 PVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 752
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 753 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 808
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 809 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 866
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 481 (174.4 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 101/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 481 (174.4 bits), Expect = 1.3e-44, P = 1.3e-44
Identities = 101/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 748
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSITI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 749 PVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 808
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 809 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 864
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 865 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 922
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 480 (174.0 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 480 (174.0 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 692 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 751
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 752 PVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 811
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 812 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 867
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 868 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 925
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 480 (174.0 bits), Expect = 1.7e-44, P = 1.7e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 748
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 749 PVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 808
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 809 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 864
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 865 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 922
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 479 (173.7 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 479 (173.7 bits), Expect = 2.1e-44, P = 2.1e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 894
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 479 (173.7 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 684 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 743
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 744 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 803
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 804 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 859
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 860 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 917
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 479 (173.7 bits), Expect = 2.2e-44, P = 2.2e-44
Identities = 100/238 (42%), Positives = 148/238 (62%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 689 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 748
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETSIT++D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 749 PLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 808
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 809 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 864
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 865 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPRLAKAIVLAAIFR 922
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 477 (173.0 bits), Expect = 3.4e-44, P = 3.4e-44
Identities = 100/238 (42%), Positives = 147/238 (61%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHP 72
H PG ILCFLPGWQ+I V + L G+ L+ HS + Q AIF P
Sbjct: 661 HIDARGEPGGILCFLPGWQEIKGVQQRLQEALGMHESKYLILPVHSNIPMMDQKAIFQQP 720
Query: 73 PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRA 132
P G+RK+VL+TN+AETS TI+D+ +VVD+G HKE RY+ K + L+ W+SRA+V QR
Sbjct: 721 PVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKVSCLETVWVSRANVIQRR 780
Query: 133 GRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFL 191
GRAGR + G ++HL+ R +M + +PEI R PLE ++L K+ + E+ + FL
Sbjct: 781 GRAGRCQSGFAYHLFPRSRLEKMVPFQVPEILRTPLENLVLQAKI----HMPEKTAVEFL 836
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
S+ + P+ ++ A L+ +GV DQ E LT LG+R+A + P+L+KA+V + I++
Sbjct: 837 SKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPRLAKAIVLAAIFR 894
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 476 (172.6 bits), Expect = 4.5e-44, P = 4.5e-44
Identities = 102/234 (43%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAI-----PGLLVTMA-HSKLDTEVQGAIFGHPPPGMRK 78
PGA+L F+ GW DI + L A P ++ +A H + + Q IF PP G+RK
Sbjct: 578 PGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEGIRK 637
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TN+AETSITI+DV YV+D G KET Y++ ++ L WIS+A+ QR GRAGR
Sbjct: 638 IVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRAGRV 697
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
PGE +HLY Y A+Y PE+ R PL+ + L K SL S FLS+ +PP
Sbjct: 698 MPGECYHLYPRCVYEAFADYQQPELLRTPLQSLCLQIK---SL-GLGSISEFLSRALQPP 753
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+ S+ +A LK++G D +ENLTPLGK ++ +P PKL K L+ I+ NC
Sbjct: 754 EALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIF--NC 805
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 460 (167.0 bits), Expect = 2.1e-42, P = 2.1e-42
Identities = 102/231 (44%), Positives = 138/231 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL------LVTMAHSKLDTEVQGAIFGHPPPGMRK 78
PGA+L FL GW DI +S + A P L L+ M H + T Q IF PP +RK
Sbjct: 539 PGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERAPPNIRK 598
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TN+AE SITI+DV +VVD G KET Y++ ++ L WIS+AS QR GRAGR
Sbjct: 599 IVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRRGRAGRL 658
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
PGE +HLY + Y AEY LPE+ R PL + L K SL E + FLS + P
Sbjct: 659 FPGECYHLYPKCVYDAFAEYQLPELLRTPLNSLCLQIK---SL-QVESIAEFLSAALQAP 714
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+ ++ +A LK++G D++ENLT LGK ++ +P PKL K L+ I++
Sbjct: 715 ESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFR 765
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 443 (161.0 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 98/229 (42%), Positives = 136/229 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS-----AIPGLLVTMA-HSKLDTEVQGAIFGHPPPGMRK 78
PG IL FL GW DI + L P L++ +A H ++T Q IF P G+RK
Sbjct: 498 PGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEPASGVRK 557
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TN+AETSITI+DVA+V+D G KET Y++ ++ L WIS+ S QR GRAGR
Sbjct: 558 IVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRRGRAGRV 617
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
+PG+ +HLY + Y AEY LPEI R PL + L K SL + S FLS+ + P
Sbjct: 618 RPGQCYHLYPKCVYDAFAEYQLPEILRTPLHSLCLQIK---SL-NLGSISEFLSRALQSP 673
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI 247
+ ++ A LK++G D+ E+LT LG+ ++ +P PKL K L+ I
Sbjct: 674 ELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAI 722
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 439 (159.6 bits), Expect = 1.3e-40, P = 1.3e-40
Identities = 88/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 403 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIV 462
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 463 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 522
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 523 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSN 578
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 579 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 626
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 445 (161.7 bits), Expect = 1.5e-40, P = 1.5e-40
Identities = 91/233 (39%), Positives = 141/233 (60%)
Query: 26 GAILCFLPGWQDIIQVS------RVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GAIL FLPGW++I + R + ++ HS++ E Q +F PP G RK+
Sbjct: 576 GAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILCLHSRVPAEEQKKVFNRPPRGCRKI 635
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AE+++TIDDV YV+D+G KE Y+ +D+ +L + W+S+A+ QRAGRAGR +
Sbjct: 636 VLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDVSTLQSSWVSKANAKQRAGRAGRCQ 695
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G +HLYS+ R + EY +PE+ R P++++ L K+ L + FL +L +PP
Sbjct: 696 AGICYHLYSKLRAASLPEYRVPEVMRMPVDELCLQVKM---LDPNCNVNDFLQKLMDPPV 752
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
SI +A LK +G EE LT LG++ +P HP++SK + +++ NC
Sbjct: 753 AQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPRISKMIYFAILV--NC 803
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 440 (159.9 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 88/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 481 GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV 540
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 541 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 600
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 601 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSD 656
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 657 EAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 704
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 441 (160.3 bits), Expect = 2.1e-40, P = 2.1e-40
Identities = 88/228 (38%), Positives = 140/228 (61%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 603 GAILVFLPGWDNISTLHDLLMSQVMFKSDRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV 662
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 663 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 722
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 723 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSD 778
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 779 EAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 826
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 440 (159.9 bits), Expect = 2.2e-40, P = 2.2e-40
Identities = 87/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ ++ HS + T Q +F PPG+RK+V
Sbjct: 491 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFIIIPLHSLMPTVNQTQVFKRTPPGVRKIV 550
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 551 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 610
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 611 GHCYHLYNSLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAHFLSRLMDPPSN 666
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 667 EAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 714
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 439 (159.6 bits), Expect = 2.7e-40, P = 2.7e-40
Identities = 88/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 482 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIV 541
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 542 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 601
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 602 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSN 657
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 658 EAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 705
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 439 (159.6 bits), Expect = 2.8e-40, P = 2.8e-40
Identities = 88/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ L+ HS + T Q +F PPG+RK+V
Sbjct: 489 GAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIV 548
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 549 IATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQP 608
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 609 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSN 664
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ + L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 665 EAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 712
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
Identities = 94/237 (39%), Positives = 142/237 (59%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPP 73
P PGAIL FLPG +I + L + +V HS L +E Q A+F PP
Sbjct: 38 PPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPP 97
Query: 74 PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAG 133
G+ K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR G
Sbjct: 98 VGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKG 157
Query: 134 RAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLS 192
RAGR G FHL++ + ++ + LPEI R PLEQ+ L K+ E ++ST S S
Sbjct: 158 RAGRVTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFS 216
Query: 193 QLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+L EPP P S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 217 RLIEPPHPDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFR 273
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 434 (157.8 bits), Expect = 9.0e-40, P = 9.0e-40
Identities = 87/228 (38%), Positives = 139/228 (60%)
Query: 26 GAILCFLPGWQDI-----IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GAIL FLPGW +I + +S+V+ ++ HS + T Q +F PPG+RK+V
Sbjct: 470 GAILVFLPGWDNISTLHDLLMSQVMFKSDRFIIIPLHSLMPTVNQTQVFKKTPPGVRKIV 529
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
++TN+AETSITIDDV +V+D G KET +++++++ ++ +W+S+A+ QR GRAGR +P
Sbjct: 530 IATNIAETSITIDDVVFVIDGGKIKETHFDTQNNISTMAAEWVSKANAKQRKGRAGRVQP 589
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDP 200
G +HLY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP
Sbjct: 590 GHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LKLGGIAYFLSKLMDPPSR 645
Query: 201 ASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++ A L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 646 DAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHIGKMILFGALF 693
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 435 (158.2 bits), Expect = 1.3e-39, P = 1.3e-39
Identities = 93/233 (39%), Positives = 139/233 (59%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL------VTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GAIL FLPGW DI + + L P + HS + Q +F PPPG RK+
Sbjct: 552 GAILVFLPGWDDINKTRQRLLENPFFADSAKFDIICLHSMVPAGEQKKVFNRPPPGCRKI 611
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AE+++TIDDV YV+D+G KE Y+ +++ +L + W+S+A+ QR GRAGR +
Sbjct: 612 VLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNVSTLQSSWVSKANAKQRQGRAGRCQ 671
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG +HLYS R M ++ +PEI R P+E++ L K+ + T + FL +L +PP
Sbjct: 672 PGICYHLYSRLRAASMPDFKVPEIKRMPVEELCLQVKILDPNCKT---NDFLQKLLDPPV 728
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
SI +A + L+ +G +E LT LG++ +P HP +SK L +V+ NC
Sbjct: 729 DQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPLISKMLFFAVLV--NC 779
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 435 (158.2 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 95/234 (40%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDI------IQVSRVLS--AIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGA+L FLPG +I +Q +R+ + +V HS L E Q A+F P G+
Sbjct: 890 PGAVLVFLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGV 949
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETS+TIDDV YV+D+G KE RY++ + SL++ W+SRA+ QR GRAG
Sbjct: 950 TKIIISTNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAG 1009
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ R+ +++ LPEI R PLEQ+ L KV E +++ S SQL
Sbjct: 1010 RVASGVCFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLE-VFAERPLDSVFSQLI 1068
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ +A L +G EE+LTPLG +A +P ++ K ++ I++
Sbjct: 1069 EPPTEGSLEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFR 1122
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 431 (156.8 bits), Expect = 1.9e-39, P = 1.9e-39
Identities = 88/223 (39%), Positives = 137/223 (61%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNV 85
GAIL FLPGW +I S + LL++ K DT G +F PPG+RK+V++TN+
Sbjct: 483 GAILVFLPGWDNI-------STLHDLLMSQVMFKSDTI--GQVFKKTPPGVRKIVIATNI 533
Query: 86 AETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFH 145
AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +PG +H
Sbjct: 534 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 593
Query: 146 LYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITS 205
LY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP +++
Sbjct: 594 LYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSDEAVSL 649
Query: 206 AATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+ L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 650 SIKHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 692
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 425 (154.7 bits), Expect = 8.5e-39, P = 8.5e-39
Identities = 95/230 (41%), Positives = 131/230 (56%)
Query: 26 GAILCFLPGWQDI------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GAIL FL GW +I I ++ L LV H + T Q IF PPP RK+
Sbjct: 504 GAILVFLTGWDEISKLLEKINMNNFLGDSSKFLVLPLHGSMPTVNQREIFDRPPPNKRKI 563
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AE+SITIDDV YVVD G KET Y++ + + L WIS+AS +QR GRAGR +
Sbjct: 564 VLATNIAESSITIDDVVYVVDCGKAKETSYDALNKVACLLPSWISKASAHQRRGRAGRVQ 623
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G + LY + Y +Y LPEI R PL+++ L K SL SFL++ +PPD
Sbjct: 624 AGVCYRLYPKVIYDAFPQYQLPEIIRTPLQELCLHIK---SL-QVGSIGSFLAKALQPPD 679
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
++ +A LK +G + E LTPLG+ + +P P + K L+ I++
Sbjct: 680 ALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNIGKMLLIGAIFQ 729
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 421 (153.3 bits), Expect = 2.3e-38, P = 2.3e-38
Identities = 87/223 (39%), Positives = 135/223 (60%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNV 85
GAIL FLPGW +I S + LL++ K T Q +F PPG+RK+V++TN+
Sbjct: 489 GAILVFLPGWDNI-------STLHDLLMSQVMFKSGTMSQ--VFKRTPPGVRKIVIATNI 539
Query: 86 AETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFH 145
AETSITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +PG +H
Sbjct: 540 AETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYH 599
Query: 146 LYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITS 205
LY+ R + +Y LPEI R PLE++ L K+ + FLS+L +PP ++
Sbjct: 600 LYNGLRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSNEAVLL 655
Query: 206 AATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+ L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 656 SIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 698
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 415 (151.1 bits), Expect = 2.4e-38, P = 2.4e-38
Identities = 91/234 (38%), Positives = 139/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 171 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 230
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 231 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 290
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++S S S+L
Sbjct: 291 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSAHNLQSVFSRLI 349
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 350 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR 403
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 421 (153.3 bits), Expect = 3.9e-38, P = 3.9e-38
Identities = 97/232 (41%), Positives = 133/232 (57%)
Query: 26 GAILCFLPGWQDIIQV------SRVLSAIPGLLVTMA-HSKLDTEVQGAIFGHPPPGMRK 78
G IL FLPG+ +I V + + S G + + HS L E Q +F PPG RK
Sbjct: 753 GTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALVFKKAPPGKRK 812
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VLSTN+AETS+TIDD +VVD G KE ++S ++ SLD W+SRA+ QR GRAGR
Sbjct: 813 IVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANAKQRKGRAGRV 872
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG HLY+ RY+ + +PEI R PLEQI+L K ++ S S L L E
Sbjct: 873 MPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTLSVLLETL-EA 931
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
P S+ A T L+ +G D E+ LTPLG +AA+P ++ K ++ I++
Sbjct: 932 PTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAIFQ 983
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 421 (153.3 bits), Expect = 4.4e-38, P = 4.4e-38
Identities = 93/234 (39%), Positives = 142/234 (60%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--SAI------PGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGA+L FLPG +I + L +A+ +V HS L +E Q ++F PP G+
Sbjct: 840 PGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLHSSLSSEEQQSVFLRPPAGV 899
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETS+TIDDV YV+D+G KE RY+ + SL++ ++SRA+ QR GRAG
Sbjct: 900 IKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMESLEDTFVSRANALQRKGRAG 959
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL+S Y ++ + LPEI R PLEQ+ L K+ E ++S + S LS+L
Sbjct: 960 RVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIKILE-MFSAQSLHSVLSRLI 1018
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1019 EPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVRIGKLMLFGTIFR 1072
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 421 (153.3 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 97/231 (41%), Positives = 135/231 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI-----PGL--LVTMAHSKLDTEVQGAIFGHPPPGMRK 78
GAIL FLPG +I + +L+A P L+ + HS + + Q +F PP G+RK
Sbjct: 916 GAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPL-HSSIASSEQRKVFLRPPKGLRK 974
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
V+ +TN+AETSITIDDV YV+D+G HKE RYN + L S+ WIS+A+ QR GRAGR
Sbjct: 975 VIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQRTGRAGRV 1034
Query: 139 KPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
KPG F LY+ R+ + M Y +PE+ R PL ++ L K L FLS+ EP
Sbjct: 1035 KPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIK----LLGLGHIKPFLSRALEP 1090
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P ++TSA + L +G + +E LTPLG +A +P + K L+ I+
Sbjct: 1091 PSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIF 1141
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 419 (152.6 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 98/233 (42%), Positives = 140/233 (60%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGL------LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GA+L FLPG I Q+ +LS L+ + HS L T+ Q A F PPPG+RK+
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQLIAL-HSVLSTQDQAAAFMLPPPGVRKI 926
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 927 VLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVR 986
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPE 196
G F LY+ +R+ EYS+PEI R PLE++ ++ C +G S E FLS+ +
Sbjct: 987 DGFCFRLYTRERFEGFLEYSVPEILRVPLEELCLHIMKCDLG----SPE---DFLSKALD 1039
Query: 197 PPDPASITSAATELKLMGVFDQEE-NLTPLGKRIAAMPCHPKLSKALVESVIY 248
PP P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1040 PPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 419 (152.6 bits), Expect = 7.5e-38, P = 7.5e-38
Identities = 94/230 (40%), Positives = 132/230 (57%)
Query: 26 GAILCFLPGWQDIIQVSRVLSA------IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GAIL FLPG +I + L+A G + HS + + Q +F PP G+RKV
Sbjct: 883 GAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFLRPPKGIRKV 942
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+++TN+AETSITI+DV YV+D+G HKE RYN L S+ W+S+A+ QR GRAGR K
Sbjct: 943 IIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQRMGRAGRVK 1002
Query: 140 PGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
PG F LY+ R+ + M Y +PE+ R PL ++ L K L + FLS+ EPP
Sbjct: 1003 PGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIK----LLGLGQIKPFLSKALEPP 1058
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
++I SA L +G + +E LTPLG +A +P + K L+ I+
Sbjct: 1059 SESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIF 1108
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 417 (151.9 bits), Expect = 1.2e-37, P = 1.2e-37
Identities = 96/233 (41%), Positives = 135/233 (57%)
Query: 26 GAILCFLPGWQ------DIIQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GA+L FLPG D+I R S + HS L T+ Q A F PP G+RK+
Sbjct: 869 GAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQDQAAAFTVPPLGVRKI 928
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VL+TN+AET ITI DV +V+D+G KE RY+ + SL+ ++S+AS QR GRAGR +
Sbjct: 929 VLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVSKASALQRQGRAGRVR 988
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPE 196
G F +Y+ DR+ EYS+PEI R PLE++ ++ C +G S E FLS+ +
Sbjct: 989 DGFCFRMYTRDRFESFMEYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSRALD 1041
Query: 197 PPDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
PP P I +A L+ +G E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1042 PPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1094
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 416 (151.5 bits), Expect = 1.4e-37, P = 1.4e-37
Identities = 92/234 (39%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 799 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 858
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 859 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 918
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++ST S S+L
Sbjct: 919 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFSRLI 977
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 978 EPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFR 1031
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 416 (151.5 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 92/234 (39%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + +V HS L +E Q A+F PP G+
Sbjct: 843 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLHSSLSSEEQQAVFVKPPVGV 902
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 903 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 962
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ + ++ + LPEI R PLEQ+ L K+ E ++ST S S+L
Sbjct: 963 RVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFSRLI 1021
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1022 EPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFR 1075
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 416 (151.5 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 92/234 (39%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 852 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPLGV 911
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 912 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 971
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++ST S S+L
Sbjct: 972 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFSRLI 1030
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1031 EPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFR 1084
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 415 (151.1 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 91/237 (38%), Positives = 141/237 (59%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPP 73
P PGAIL FLPG +I + L + ++ HS L +E Q A+F PP
Sbjct: 839 PPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPP 898
Query: 74 PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAG 133
G+ K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR G
Sbjct: 899 MGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKG 958
Query: 134 RAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLS 192
RAGR G FHL++ + ++ + LPEI R PLEQ+ L K+ E ++ST S +
Sbjct: 959 RAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFA 1017
Query: 193 QLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+L EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1018 RLIEPPHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFR 1074
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 415 (151.1 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 91/234 (38%), Positives = 139/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGAIL FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 847 PGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGV 906
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 907 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAG 966
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++S S S+L
Sbjct: 967 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSAHNLQSVFSRLI 1025
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1026 EPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFR 1079
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 415 (151.1 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 91/234 (38%), Positives = 140/234 (59%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP--------GLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PGA+L FLPG +I + L + ++ HS L +E Q A+F PP G+
Sbjct: 849 PGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPLHSSLSSEEQQAVFVKPPMGV 908
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
K+++STN+AETSITIDDV YV+D+G KE RY++ + SL++ ++S+A+ QR GRAG
Sbjct: 909 TKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGMESLEDTFVSQANALQRKGRAG 968
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G FHL++ Y ++ + LPEI R PLEQ+ L K+ E ++ST S S+L
Sbjct: 969 RVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILE-MFSTHNLQSVFSRLI 1027
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP S+ ++ L+ +G +E LTPLG +A++P ++ K ++ I++
Sbjct: 1028 EPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLLGSIFR 1081
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 413 (150.4 bits), Expect = 3.1e-37, P = 3.1e-37
Identities = 96/232 (41%), Positives = 138/232 (59%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS+ V HS L T+ Q A F PPPG+RK+V
Sbjct: 867 GAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQVIALHSVLSTQDQAAAFMFPPPGVRKIV 926
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 927 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 986
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F LY+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 987 GFCFRLYTRERFEGFLDYSVPEILRVPLEELCLHIMKCDLG----SPE---DFLSKALDP 1039
Query: 198 PDPASITSAATELKLMGVFDQEE-NLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1040 PQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1091
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 410 (149.4 bits), Expect = 6.4e-37, P = 6.4e-37
Identities = 95/232 (40%), Positives = 137/232 (59%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PPPG+RK+V
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIV 924
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 925 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 984
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 985 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1037
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1038 PQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIF 1089
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 410 (149.4 bits), Expect = 6.4e-37, P = 6.4e-37
Identities = 95/232 (40%), Positives = 137/232 (59%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PPPG+RK+V
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPPGVRKIV 927
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 928 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 987
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 988 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1040
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1041 PQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 407 (148.3 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 91/232 (39%), Positives = 135/232 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVL-------SAIPGLLVTMAHSKLDTEVQGAI-------FGH 71
GAIL FLPGW +I ++ +L S ++ HS + T Q + F
Sbjct: 503 GAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVISLFPQVFKK 562
Query: 72 PPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQR 131
PPPG+RK+V++TN+AETSITIDDV YV+D G KET +++++++ ++ +W+S A+ QR
Sbjct: 563 PPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWVSIANAKQR 622
Query: 132 AGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFL 191
GRAGR PG+ +HLY+ R + Y LPEI R PLE++ L KV ++FL
Sbjct: 623 KGRAGRVSPGKCYHLYNGLRASLLDNYQLPEIQRTPLEELCLQIKV----LKLGPIATFL 678
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
+ +PP +I A T L + D++E LTPLG +A MP P + K ++
Sbjct: 679 QKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMIL 730
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 409 (149.0 bits), Expect = 8.6e-37, P = 8.6e-37
Identities = 96/245 (39%), Positives = 139/245 (56%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGLLVTMAHSKLDTE 63
NY +TT G IL FLPG +I + +L ++ L V H+ L+T+
Sbjct: 866 NYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEINRACGMLRSLNCLHVLPLHASLETK 925
Query: 64 VQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWI 123
Q +F PP G RKVV++TNVAETSITIDD+ VVDTG KET Y++ +++ L+ +
Sbjct: 926 EQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMRRLEETFA 985
Query: 124 SRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYS 183
S A+ QR GRAGR + GE + LY+ +MAE PE+ R PLEQ+ L+ +
Sbjct: 986 SLAACKQRRGRAGRVQAGECYKLYTRKLESQMAERPEPEMRRVPLEQLCLSVRA----MG 1041
Query: 184 TERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
FL++ P PP+ A++ A T L+ MG D EE LT LG+++AA+P + K +V
Sbjct: 1042 IADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDGEE-LTALGRQLAAIPADLRCGKLMV 1100
Query: 244 ESVIY 248
++
Sbjct: 1101 YGAVF 1105
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 407 (148.3 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 95/232 (40%), Positives = 137/232 (59%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PPPG+RK+V
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSNDRRFYSERYKVIALHSILSTQDQAAAFTLPPPGVRKIV 927
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 928 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 987
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 988 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1040
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1041 PQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 403 (146.9 bits), Expect = 2.0e-36, P = 2.0e-36
Identities = 91/234 (38%), Positives = 136/234 (58%)
Query: 26 GAILCFLPGWQDIIQV-SRVL-------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
GAIL FLPG+ +I+ + R+L V M HS + T Q + +PP G+R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAGR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGR 741
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC--SSFLSQLP 195
+PG F L+S R++ M E+ PE+ R PL+++ L K L + C + FL + P
Sbjct: 742 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAPVNCPIADFLMKAP 797
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 851
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 402 (146.6 bits), Expect = 2.2e-36, P = 2.2e-36
Identities = 92/241 (38%), Positives = 136/241 (56%)
Query: 18 HFPCPSFP-GAILCFLPGWQDIIQVSRVLS---AIPG------LLVTMAHSKLDTEVQGA 67
++ C + P GAIL FLPG+ I Q+ +L G + V HS + + Q A
Sbjct: 414 YYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAVFPLHSLMQSGEQQA 473
Query: 68 IFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRAS 127
+F PP G RKV++ST +AETS+TIDDV YV+++G K T Y+ + ++ SLD W+++A+
Sbjct: 474 VFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKAN 533
Query: 128 VNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC 187
QR GRAGR +PG ++L+S R RM + PEI R LE I+L+ K L +
Sbjct: 534 TQQRRGRAGRVRPGICYNLFSRAREDRMDDIPTPEILRSKLESIILSLK----LLHIDDP 589
Query: 188 SSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI 247
FL L P+P +I LK + DQ LTPLG +A +P P++ K ++ S +
Sbjct: 590 YRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSAL 649
Query: 248 Y 248
+
Sbjct: 650 F 650
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 405 (147.6 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 90/234 (38%), Positives = 137/234 (58%)
Query: 26 GAILCFLPGWQDIIQV-SRVL-------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
GA+L FLPG+ +I+ + R+L + V M HS + T Q + +PP G+R
Sbjct: 623 GAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 682
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAGR
Sbjct: 683 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 742
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC--SSFLSQLP 195
+PG F L+S R++ M E+ PE+ R PL+++ L K L + C + FL + P
Sbjct: 743 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAPVNCPIADFLMKAP 798
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 799 EPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 852
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 405 (147.6 bits), Expect = 2.4e-36, P = 2.4e-36
Identities = 90/232 (38%), Positives = 136/232 (58%)
Query: 26 GAILCFLPGWQDIIQV-SRVL-------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
GAIL FLPG+ +I+ + R+L V M HS + T Q + +PP G+R
Sbjct: 638 GAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 697
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAGR
Sbjct: 698 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 757
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG F L+S R++ M E+ PE+ R PL+++ L K+ + T + FL + PEP
Sbjct: 758 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLLAPVNCT--IADFLMKAPEP 815
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
P + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 816 PPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 867
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 402 (146.6 bits), Expect = 3.4e-36, P = 3.4e-36
Identities = 90/235 (38%), Positives = 137/235 (58%)
Query: 26 GAILCFLPGWQDIIQV-SRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
GA+L FLPG+ +I+ + R+L + V M HS + T Q + +PP G+
Sbjct: 343 GAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQVFMLHSNMQTSDQKKVLKNPPAGV 402
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RK++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAG
Sbjct: 403 RKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAG 462
Query: 137 RTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC--SSFLSQL 194
R +PG F L+S R++ M E+ PE+ R PL+++ L K L + C + FL +
Sbjct: 463 RCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAPVNCPIADFLMKA 518
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PEPP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 519 PEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 573
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 403 (146.9 bits), Expect = 3.8e-36, P = 3.8e-36
Identities = 91/234 (38%), Positives = 136/234 (58%)
Query: 26 GAILCFLPGWQDIIQV-SRVL-------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
GAIL FLPG+ +I+ + R+L V M HS + T Q + +PP G+R
Sbjct: 622 GAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVFMLHSNMQTSDQKKVLKNPPAGVR 681
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAGR
Sbjct: 682 KIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAIQRKGRAGR 741
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS--SFLSQLP 195
+PG F L+S R++ M E+ PE+ R PL+++ L K L + C+ FL + P
Sbjct: 742 CRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAPVNCAIADFLMKAP 797
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
EPP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 798 EPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 851
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 402 (146.6 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 92/235 (39%), Positives = 136/235 (57%)
Query: 26 GAILCFLPGWQDIIQV-SRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
GAIL FLPG+ +II + R++ +A V M HS + T Q + PP G+
Sbjct: 533 GAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQVFMLHSNMQTLDQKNVLKTPPSGI 592
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RK++LSTN+AETSIT++DV +V+D+G KE +++ + L WIS+AS QR GRAG
Sbjct: 593 RKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALSCVTMLKTVWISKASAIQRRGRAG 652
Query: 137 RTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS--SFLSQL 194
R +PG FHL+S R++ M E+ PE+ R PL+++ L K L + C FL +
Sbjct: 653 RCRPGVCFHLFSRLRFQNMLEFQTPELRRMPLQELCLHTK----LLAPVNCPVVDFLMKA 708
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
P+PP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 709 PDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPVEPHLGKMVLCAVVLK 763
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 402 (146.6 bits), Expect = 4.6e-36, P = 4.6e-36
Identities = 94/232 (40%), Positives = 136/232 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PP G+RK+V
Sbjct: 865 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIV 924
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 925 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 984
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 985 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1037
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1038 PQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1089
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 399 (145.5 bits), Expect = 5.0e-36, P = 5.0e-36
Identities = 86/225 (38%), Positives = 135/225 (60%)
Query: 26 GAILCFLPGWQDIIQV-SRVLSAIPGLLVT--MAHSKLDTEVQGAIFGHPPPGMR-KVVL 81
GA++ +LPG+ D+ + +R+ S++P +T + HS++D Q +F PG+R K++L
Sbjct: 461 GAVIVYLPGYSDMTSLLARLESSLPREQITIILLHSQVDNSEQRKVF-RTYPGVRLKIIL 519
Query: 82 STNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPG 141
STN+ +TSITI D+ YV+DTG K Y+S D L WIS+A QRAGRAGR G
Sbjct: 520 STNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLTLTWISQADAKQRAGRAGRVCHG 579
Query: 142 ESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPA 201
+ LY DR RM Y++PEI R+ L++I L K+ ++ +FL+ + P
Sbjct: 580 NCYRLYDNDRMARMNLYTIPEIMRRTLDEICLLTKLAAP---DKKIENFLALALDTPPKD 636
Query: 202 SITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
++ + + LKL+GV D+ + +TPLG +A +P ++ K LV S+
Sbjct: 637 AVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKCLVYSI 681
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 400 (145.9 bits), Expect = 7.5e-36, P = 7.5e-36
Identities = 94/232 (40%), Positives = 136/232 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PP G+RK+V
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIV 927
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 928 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 987
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 988 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1040
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1041 PQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 400 (145.9 bits), Expect = 7.5e-36, P = 7.5e-36
Identities = 94/232 (40%), Positives = 136/232 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PP G+RK+V
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIV 927
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 928 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 987
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 988 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1040
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1041 PQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 400 (145.9 bits), Expect = 7.5e-36, P = 7.5e-36
Identities = 94/232 (40%), Positives = 136/232 (58%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGLL-----VTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
GA+L FLPG I Q+ +LS V HS L T+ Q A F PP G+RK+V
Sbjct: 868 GAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALHSILSTQDQAAAFTLPPQGVRKIV 927
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
L+TN+AET ITI DV +V+DTG KE +Y+ + SL ++S+AS QR GRAGR +
Sbjct: 928 LATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVSKASALQRQGRAGRVRD 987
Query: 141 GESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---LLTCKVGESLYSTERCSSFLSQLPEP 197
G F +Y+ +R+ +YS+PEI R PLE++ ++ C +G S E FLS+ +P
Sbjct: 988 GFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMKCNLG----SPE---DFLSKALDP 1040
Query: 198 PDPASITSAATELKLMGVFD-QEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P I++A L+ +G + E LTPLG+ +AA+P + K+ K L+ I+
Sbjct: 1041 PQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGAIF 1092
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 397 (144.8 bits), Expect = 1.6e-35, P = 1.6e-35
Identities = 90/233 (38%), Positives = 135/233 (57%)
Query: 27 AILCFLPGWQDIIQV-SRVL-------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
AIL FLPG+ +I+ + R+L V M HS + T Q + +PP G+RK
Sbjct: 624 AILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVFMLHSNMQTSDQKKVLKNPPAGVRK 683
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
++LSTN+AETSIT++DV +V+D+G KE +++ + + L WIS+AS QR GRAGR
Sbjct: 684 IILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTMLKMVWISKASAVQRKGRAGRC 743
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC--SSFLSQLPE 196
+PG F L+S R++ M E+ PE+ R PL+++ L K L + C + FL + PE
Sbjct: 744 RPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTK----LLAPVNCPIADFLMKAPE 799
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PP + +A LK + D E+LT LG +A +P P L K ++ +V+ K
Sbjct: 800 PPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVEPHLGKMVLCAVVLK 852
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 396 (144.5 bits), Expect = 1.7e-35, P = 1.7e-35
Identities = 87/236 (36%), Positives = 131/236 (55%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIP-----GLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ + Q +F P G+ KV
Sbjct: 652 PGAVLVFLPGWNLIYAMQKHLEMNPHFGSHSYCILPLHSQIPRDEQRKVFDPVPDGIIKV 711
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + S +++ + W S+ ++ QR GRAGR +
Sbjct: 712 ILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVR 771
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S+ R+ ++ + PEIFR PL ++ L+ K L FLS+ EPP
Sbjct: 772 PGFCFHLCSKARFDKLETHLTPEIFRTPLHEVALSIK----LLRLGGIGHFLSKAIEPPP 827
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+L K ++ I Y G+ C
Sbjct: 828 LDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALC 883
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 393 (143.4 bits), Expect = 2.3e-35, P = 2.3e-35
Identities = 81/219 (36%), Positives = 130/219 (59%)
Query: 32 LPGWQDII--QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETS 89
LPGW I+ VS + ++ HS L +F PPG+RK+V++TN+AETS
Sbjct: 469 LPGWLVILTYMVSAFVKNRKFKIIFKYHSNLCYLNILQVFKRTPPGVRKIVIATNIAETS 528
Query: 90 ITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSE 149
ITIDDV YV+D G KET +++++++ ++ +W+S+A+ QR GRAGR +PG +HLY+
Sbjct: 529 ITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNG 588
Query: 150 DRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATE 209
R + +Y LPEI R PLE++ L K+ + FLS+L +PP +++ +
Sbjct: 589 LRASLLDDYQLPEILRTPLEELCLQIKI----LRLGGIAYFLSRLMDPPSNEAVSLSIKH 644
Query: 210 LKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
L + D++E LTPLG +A +P P + K ++ ++
Sbjct: 645 LMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALF 683
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 395 (144.1 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 87/224 (38%), Positives = 130/224 (58%)
Query: 27 AILCFLPGWQDIIQVSRVLSAIPGL------LVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
+IL FLPGW+DI Q ++ P L L+ HS + ++Q +F PPP +RK+V
Sbjct: 951 SILIFLPGWEDISQTRELMRRHPMLRNENEFLILPLHSSVSMQLQAKVFEKPPPKIRKIV 1010
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT-K 139
LSTN+AETSITI+DV YV+D+ K + ++ DL W ++S+ QR GRAGR K
Sbjct: 1011 LSTNIAETSITINDVVYVIDSAKVKLKYHETQRDLTLFQTVWACKSSLKQRRGRAGRVRK 1070
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G +H+ S DRY + E+ L E+ R PL ++ L KV L + FLS+ EPP+
Sbjct: 1071 DGVCYHMVSRDRYNTLEEFQLSEMRRMPLHELCLQVKV---LVLGD-VIGFLSEALEPPE 1126
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
SI +A L +G + + LTPLG +++ +P P++ K ++
Sbjct: 1127 TKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPRIGKMII 1170
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 394 (143.8 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 86/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ KV
Sbjct: 651 PGAVLVFLPGWNLIYTMQKHLEMNPDFGSHRYQILPLHSQIPREEQRKVFDPVPAGVTKV 710
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 711 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 770
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 771 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 826
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 827 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVC 882
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 393 (143.4 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 86/236 (36%), Positives = 131/236 (55%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ KV
Sbjct: 656 PGAVLVFLPGWNLIYFMQKHLEMNPHFGGHQYRILPLHSQIPREEQRRVFEPVPDGVTKV 715
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV +V+D+ K + S +++ + W S+ ++ QR GRAGR +
Sbjct: 716 ILSTNIAETSITINDVVFVLDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAGRVR 775
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ ++ + PEIFR PL ++ L+ K L +FLS+ EPP
Sbjct: 776 PGFCFHLCSRARFEKLETHMTPEIFRTPLHEVALSIK----LLRLGGIGNFLSKAIEPPP 831
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK-GNCNC 254
++ A L+ + D + LTPLG+ +A +P P+L K ++ I+ G+ C
Sbjct: 832 LDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIMGCIFNVGDAVC 887
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 393 (143.4 bits), Expect = 4.5e-35, P = 4.5e-35
Identities = 87/238 (36%), Positives = 133/238 (55%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSAIP------GLLVTMAHSKLDTEVQGAIFGHPPPG 75
P F +L FLPG +I++V ++ +P + M HS L + Q ++F PP G
Sbjct: 900 PKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLSSAQQQSVFNIPPKG 959
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
RK+VLSTN+AET +TI DV V+DTG H+E RYNS+ L L + ++S+A+ QR+GRA
Sbjct: 960 CRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDTFVSKANAKQRSGRA 1019
Query: 136 GRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLT---CKVGESLYSTERCSSFL 191
GR + G +HL+S+ ++ + Y PEI R L++++L C++G+ L
Sbjct: 1020 GRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQMGD-------VQDVL 1072
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+ +PP +I A +L +G + E LT LGK ++ +P L K LV YK
Sbjct: 1073 GKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVLGCFYK 1130
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 392 (143.0 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 86/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ KV
Sbjct: 650 PGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKV 709
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 710 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 769
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 770 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 825
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 826 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 881
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 392 (143.0 bits), Expect = 4.7e-35, P = 4.7e-35
Identities = 86/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ KV
Sbjct: 650 PGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPVGVTKV 709
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 710 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 769
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 770 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 825
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 826 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 881
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 392 (143.0 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 85/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ K+
Sbjct: 647 PGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKI 706
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 707 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 766
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 767 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 822
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 823 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 878
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 392 (143.0 bits), Expect = 4.8e-35, P = 4.8e-35
Identities = 85/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ K+
Sbjct: 647 PGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQILPLHSQIPREEQRKVFDPVPSGVTKI 706
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 707 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 766
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 767 PGFCFHLCSRARFERLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 822
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 823 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 878
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 391 (142.7 bits), Expect = 6.1e-35, P = 6.1e-35
Identities = 86/236 (36%), Positives = 129/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGL-----LVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L P + HS++ E Q +F P G+ KV
Sbjct: 642 PGAVLVFLPGWNLIYTMQKHLEMNPHFGNHRYQILPLHSQIPREEQRKVFDPVPAGVTKV 701
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 702 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 761
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 762 PGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 817
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 818 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAIC 873
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 390 (142.3 bits), Expect = 6.7e-35, P = 6.7e-35
Identities = 98/230 (42%), Positives = 128/230 (55%)
Query: 26 GAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G ++I + L +P L++ +S L +E+Q IF PPPG R
Sbjct: 724 GDILVFLTGQEEIDSACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPPPPGKR 783
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVV++TN+AE S+TID + YVVD G K+ YN K L SL IS+AS QRAGRAGR
Sbjct: 784 KVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGR 843
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ + LY+E YR M S+PEI R L LT K SF +
Sbjct: 844 TGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGMTTLTMKA----MGINDLLSF--DFMD 897
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP P ++ SA +L +G D+E LT LG+++A P P LSK L+ SV
Sbjct: 898 PPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLEPPLSKMLLASV 947
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 386 (140.9 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 90/236 (38%), Positives = 133/236 (56%)
Query: 26 GAILCFLPGWQDIIQV-SRVLSAIP-GLL----VTMAHSKLDTEVQGAIFGHPPPGMRKV 79
GA+L FLPGW +I+ + +R+L G + HS+L ++ Q +F H P G RK+
Sbjct: 660 GAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFNHYP-GKRKI 718
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
++STN+AETSITIDDV YV+D+ KE Y S +++V W S+ +V QR GRAGR +
Sbjct: 719 IVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQRRGRAGRVR 778
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G +FHL S+ R+ + ++ E+ R PL QI LT K L FL + +PP
Sbjct: 779 AGYAFHLCSKMRFEALDDHGTAEMLRIPLHQIALTIK----LLRLGSVGEFLGKALQPPP 834
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV-ESVIYKGNCNC 254
+ + L+ MG D+ LT LGK +A MP P ++K L+ + + G+ C
Sbjct: 835 YDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSVMC 890
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 383 (139.9 bits), Expect = 3.8e-34, P = 3.8e-34
Identities = 85/236 (36%), Positives = 128/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS-----AIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L + HS++ E Q +F P G+ KV
Sbjct: 653 PGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKV 712
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 713 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 772
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 773 PGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 828
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
++ A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 829 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVC 884
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 384 (140.2 bits), Expect = 3.9e-34, P = 3.9e-34
Identities = 86/236 (36%), Positives = 128/236 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS-----AIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
PGA+L FLPGW I + + L + HS++ E Q +F P G+ KV
Sbjct: 652 PGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQILPLHSQIPREEQRKVFDPVPDGVTKV 711
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+LSTN+AETSITI+DV YV+D+ K + + +++ + W S+ ++ QR GRAGR +
Sbjct: 712 ILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAGRVR 771
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
PG FHL S R+ R+ + PE+FR PL +I L+ K L FL++ EPP
Sbjct: 772 PGFCFHLCSRARFDRLETHMTPEMFRTPLHEIALSIK----LLRLGGIGQFLAKAIEPPP 827
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVI-YKGNCNC 254
+I A L+ + D + LTPLG+ +A +P P+ K ++ I Y G+ C
Sbjct: 828 LDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVC 883
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 381 (139.2 bits), Expect = 7.3e-34, P = 7.3e-34
Identities = 87/238 (36%), Positives = 130/238 (54%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVL--SAIPG----LLVTMAHSKLDTEVQGAIFGH 71
H + PGAIL FLPGW I + + L + I G + HS++ + Q +F
Sbjct: 646 HIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEP 705
Query: 72 PPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETR-YNSKDDLVSLDNQWISRASVNQ 130
P G+ K++LSTN+AETSITIDD+ +V+D C + + S ++L S W S+ ++ Q
Sbjct: 706 VPEGVTKIILSTNIAETSITIDDIVFVIDI-CKARMKLFTSHNNLTSYATVWASKTNLEQ 764
Query: 131 RAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSF 190
R GRAGR +PG F L S R++ + + PE+FR PL ++ LT K L F
Sbjct: 765 RKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIK----LLRLGSIHHF 820
Query: 191 LSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
LS+ EPP ++ A L+ M D + LTPLG+ +A +P P+L K +V ++
Sbjct: 821 LSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVF 878
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 375 (137.1 bits), Expect = 2.6e-33, P = 2.6e-33
Identities = 91/231 (39%), Positives = 133/231 (57%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I ++L S +P L++ +S L +E+Q IF PPG
Sbjct: 716 PGDILLFLTGQEEIDAACQILYERMKSLGSNVPDLIILPVYSALPSEMQTKIFEPAPPGS 775
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YV+D G K+ +N K+ + SL IS+A+ QR+GRAG
Sbjct: 776 RKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAG 835
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E ++ M S+PEI R L +LT K +F
Sbjct: 836 RTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTVLTMKA----MGINDLLNF--DFM 889
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP ++ SA +L +G D+E LT LG+++A P P+LSK L+ SV
Sbjct: 890 DPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDPQLSKMLIASV 940
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 373 (136.4 bits), Expect = 3.2e-33, P = 3.2e-33
Identities = 93/234 (39%), Positives = 136/234 (58%)
Query: 26 GAILCFLPGWQDIIQVS--------RVLSA-IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
G IL FL G Q+ I+ S ++L IP L++ +S L +E+Q IF PPG
Sbjct: 549 GDILVFLTG-QEEIETSCEALHERMKLLGENIPELIILPVYSALPSEMQTRIFEPTPPGS 607
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKV+L+TN+AETSITID + YVVD G K Y+SK + SL IS+A NQR+GRAG
Sbjct: 608 RKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTPISKAQANQRSGRAG 667
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E Y + M ++PEI R+ L +L K +F +
Sbjct: 668 RTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKA----MGIHDLVNF--EFM 721
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+PP ++ +A +L ++ D + NLT LG+++A +P P L+K L++SV Y+
Sbjct: 722 DPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQSVEYE 775
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 371 (135.7 bits), Expect = 8.2e-33, P = 8.2e-33
Identities = 81/200 (40%), Positives = 121/200 (60%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
S + L V +S L T+ Q +F PPPG R +++TNVAETS+TI + YVVD G K
Sbjct: 766 SEVGPLYVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSK 825
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRM-AEYSLPEIF 164
E +YN ++ + S + W+S+AS NQRAGRAGRT PG + LYS + ++S+PEI
Sbjct: 826 ERKYNQENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEIL 885
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN-LT 223
R P E I+L+ K S+ ++ ++F P PPD S+ A L ++G D+E+ +T
Sbjct: 886 RMPFESIVLSMK---SM-GIDQIANF--PFPTPPDRFSLKKAEELLVILGALDKEQKQIT 939
Query: 224 PLGKRIAAMPCHPKLSKALV 243
LGK+++ P P+ +K L+
Sbjct: 940 DLGKKMSLFPLSPRFAKILI 959
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 369 (135.0 bits), Expect = 1.2e-32, P = 1.2e-32
Identities = 100/252 (39%), Positives = 133/252 (52%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTM 55
+YL TT H P PG IL FL G ++I +L ++P L++
Sbjct: 732 DYLDAALTTVM-QIHIDEP--PGDILLFLTGQEEIDTSCEILFERMKALGPSVPELIILP 788
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
+S L E+Q IF PPG RKVV++TN+AETSITID + YVVD G K+ Y+ K +
Sbjct: 789 VYSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGM 848
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLT 174
SL IS+A NQRAGRAGRT PG+ F LY+E Y+ M S+PEI R+ L +L
Sbjct: 849 DSLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILL 908
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
K F +PP ++ +A EL + D E LT LG+++A P
Sbjct: 909 LKA----MGINDLLHF--DFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPM 962
Query: 235 HPKLSKALVESV 246
P LSK L+ SV
Sbjct: 963 EPSLSKVLIASV 974
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 368 (134.6 bits), Expect = 1.4e-32, P = 1.4e-32
Identities = 91/229 (39%), Positives = 121/229 (52%)
Query: 19 FPCPSFPGAILCFLPGWQDIIQVSRVLSAIPG----LLVTMAHSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I V +V HS L Q +F PP
Sbjct: 373 YP-PEERGDLLVFLSGMAEISAVLEAAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPP 431
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 432 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGR 491
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 492 AGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMK-SMSV-GDPRTFPFI--- 546
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 547 -EPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 594
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 367 (134.2 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 91/229 (39%), Positives = 122/229 (53%)
Query: 19 FPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGL----LVTMAHSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I V A L +V HS L Q +F P
Sbjct: 375 YP-PEERGDLLVFLSGMAEITTVLDAAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPA 433
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 434 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGR 493
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG + LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 494 AGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDALVLQMK-SMSV-GDPRTFPFI--- 548
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 549 -EPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 596
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 366 (133.9 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 92/229 (40%), Positives = 122/229 (53%)
Query: 19 FPCPSFPGAILCFLPGWQDIIQVSRVL----SAIPGLLVTMAHSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I V S +V HS L Q +F PP
Sbjct: 372 YP-PEERGDLLVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPP 430
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 431 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGR 490
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 491 AGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMK-SMSV-GDPRTFPFI--- 545
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 546 -EPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 593
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 366 (133.9 bits), Expect = 2.5e-32, P = 2.5e-32
Identities = 92/229 (40%), Positives = 122/229 (53%)
Query: 19 FPCPSFPGAILCFLPGWQDIIQVSRVL----SAIPGLLVTMAHSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I V S +V HS L Q +F PP
Sbjct: 377 YP-PEERGDLLVFLSGMAEISSVLEAAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPP 435
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 436 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGR 495
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 496 AGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMK-SMSV-GDPRTFPFI--- 550
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
EPP PAS+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 551 -EPPPPASLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 598
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 365 (133.5 bits), Expect = 3.0e-32, P = 3.0e-32
Identities = 91/229 (39%), Positives = 121/229 (52%)
Query: 19 FPCPSFPGAILCFLPGWQDIIQVSRVLSAIPG----LLVTMAHSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I V A +V HS L Q +F PP
Sbjct: 373 YP-PEERGDLLVFLSGMAEISAVLEPAQAYASHTQRWVVLPLHSALSVADQDKVFDVAPP 431
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 432 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGR 491
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 492 AGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMK-SMSV-GDPRTFPFI--- 546
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
EPP P S+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 547 -EPPPPTSLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 594
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 364 (133.2 bits), Expect = 3.9e-32, P = 3.9e-32
Identities = 93/235 (39%), Positives = 129/235 (54%)
Query: 19 FPCPSFPGAILCFLPGWQDI---IQVSRVLSAIPGLLVTMA-HSKLDTEVQGAIFGHPPP 74
+P P G +L FL G +I ++ ++ + G V + HS L Q +F PP
Sbjct: 373 YP-PEERGDLLVFLSGLAEIGAVLEAAQAHARRSGRWVVLPLHSTLSVAAQDKVFDVAPP 431
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
G+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS QR GR
Sbjct: 432 GVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGR 491
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R F+
Sbjct: 492 AGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDALVLQMK-SMSV-GDPRTFPFI--- 546
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV-ESVIY 248
EPP AS+ +A L+ G D E LTP+G +A +P + K LV SV++
Sbjct: 547 -EPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLH 600
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 362 (132.5 bits), Expect = 6.5e-32, P = 6.5e-32
Identities = 91/231 (39%), Positives = 131/231 (56%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLS-AIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I + S++L +IP L++ +S L +E+Q IF PPG
Sbjct: 719 PGDILVFLTGQEEIDTSCEILYERSKMLGDSIPELVILPVYSALPSEIQSRIFEPAPPGG 778
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K++ ++ K + SL IS+A QR+GRAG
Sbjct: 779 RKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDPKLGMDSLIVTPISQAQARQRSGRAG 838
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M +PEI R+ L +L K +F
Sbjct: 839 RTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSHTILMLKA----MGINDLLNF--DFM 892
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP ++ +A L + D E LTPLG+++A P P+LSK L+ SV
Sbjct: 893 DPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPMEPQLSKVLITSV 943
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 361 (132.1 bits), Expect = 8.4e-32, P = 8.4e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 721 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 780
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 781 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 840
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 841 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 895
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 896 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 945
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 361 (132.1 bits), Expect = 8.5e-32, P = 8.5e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 773 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 832
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 833 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 892
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 947
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 948 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 997
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 361 (132.1 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 742 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 801
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 802 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 861
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 862 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 916
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 917 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 966
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 361 (132.1 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 763 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 822
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 823 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 882
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 883 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 937
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 938 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 987
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 361 (132.1 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 765 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 824
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 825 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 884
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 885 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 939
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 940 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 989
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 361 (132.1 bits), Expect = 8.9e-32, P = 8.9e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 769 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 828
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 829 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 888
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 889 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 943
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 944 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 993
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 361 (132.1 bits), Expect = 9.0e-32, P = 9.0e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 773 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 832
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 833 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 892
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 893 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 947
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 948 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 997
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 361 (132.1 bits), Expect = 9.1e-32, P = 9.1e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 783 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 842
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 843 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 902
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 903 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 957
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 958 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 1007
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 361 (132.1 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 795 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 854
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 855 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 914
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 915 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 969
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 970 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 1019
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 361 (132.1 bits), Expect = 9.3e-32, P = 9.3e-32
Identities = 97/231 (41%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF PPG
Sbjct: 797 PGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGS 856
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + L IS+A QRAGRAG
Sbjct: 857 RKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAG 916
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E YR M ++PEI R L +L+ K SF +
Sbjct: 917 RTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKA----MGINDLLSF-DFMD 971
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP IT A +L +G D E LT LG+R+A P P L K L+ SV
Sbjct: 972 APPMETLIT-AMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSV 1021
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 358 (131.1 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 96/240 (40%), Positives = 136/240 (56%)
Query: 18 HFPCPSFPGAILCFLPGWQDI-----IQVSRV--LSAIPGLLVTMAHSKLDTEVQGAIFG 70
H P+ G IL F+ G +DI I R+ L P L + +S++ ++Q IF
Sbjct: 695 HLSQPA--GDILVFMTGQEDIEATCEIIADRLNQLHDAPRLSILPIYSQMPADLQAKIFD 752
Query: 71 HPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQ 130
PG+RKVV++TN+AETS+T+ ++YVVDTG K YNSK + +L IS+A+ NQ
Sbjct: 753 SAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLGIDTLQVTPISQANANQ 812
Query: 131 RAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSS 189
RAGRAGRT PG ++ LY+E Y R M E +LPEI R L +L K SL E S
Sbjct: 813 RAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVLILK---SL-GVEEISD 868
Query: 190 FLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
F + PP+ ++ ++ EL +G D LT LGK+++ P P LSK ++ + YK
Sbjct: 869 F-DFMDRPPND-TLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPSLSKLIIIAEDYK 926
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 355 (130.0 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 86/227 (37%), Positives = 120/227 (52%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPG----LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVL 81
G +L FL G +I + +V HS L Q +F PPG+RK ++
Sbjct: 379 GDLLLFLSGVAEISTIQEACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRKCII 438
Query: 82 STNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPG 141
STN+AETS+TID V +VVD+G KE ++ K + L WISRAS QR GRAGRT PG
Sbjct: 439 STNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRTGPG 498
Query: 142 ESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPA 201
+ LYSE Y A Y +PEI R L+ ++L K L R +F+ +PP +
Sbjct: 499 VCYRLYSESDYDAFAPYPVPEIHRVALDSLILQMK-SMGL-GDPRTFTFI----DPPPAS 552
Query: 202 SITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
SI +A T L+ G D+ LT +G+ +A +P + K LV ++
Sbjct: 553 SIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVF 599
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 355 (130.0 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 81/213 (38%), Positives = 124/213 (58%)
Query: 34 GWQDIIQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITID 93
G+++++ + +A L V +S L T+ Q +F PP G R +++TNVAETS+TI
Sbjct: 714 GFEEVLTEGQ--TANDPLYVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIP 771
Query: 94 DVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR 153
V YVVD+G KE +YN + + S + W+S+AS NQR+GRAGRT PG + LYS +
Sbjct: 772 GVRYVVDSGRSKERKYNESNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFE 831
Query: 154 R-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKL 212
++S PEI R P+E I+L K S+ + +F P PPD +++ A L+
Sbjct: 832 HDFEQFSKPEILRMPVESIVLQMK---SM-AIHNIINF--PFPTPPDRVALSKAIQLLQY 885
Query: 213 MGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
+G D +E +T GK+++ P P+ SK L+ S
Sbjct: 886 LGALDNKEMITEDGKKMSLFPLSPRFSKMLLVS 918
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 348 (127.6 bits), Expect = 5.8e-31, P = 5.8e-31
Identities = 85/225 (37%), Positives = 124/225 (55%)
Query: 26 GAILCFLPGWQDIIQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLS 82
GAIL FLPG + I LS L + + +L E Q +F P G RKVV++
Sbjct: 226 GAILIFLPGERSIKNCITRLSHERWFRKLFLLPLYGRLSKEEQEQVFNRAPFGKRKVVIA 285
Query: 83 TNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGE 142
TN+AETSITIDDV V+D+G K YN SLD IS+AS NQR GRAGR + G
Sbjct: 286 TNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDETPISQASCNQRRGRAGRVRAGT 345
Query: 143 SFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGE-SLYSTERCSSFLSQLPEPPDPA 201
+ LYS D + + Y+L EI+R L ++++ ++ E ++ E F+S PP
Sbjct: 346 CYRLYSRDDFEQREPYTLEEIYRTDLSEVVM--RMAELGIHDFEHFD-FIS----PPGTH 398
Query: 202 SITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
I A L+L+G + + +L+ +GK + P P+ S+ +VE++
Sbjct: 399 GIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVEAL 443
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 352 (129.0 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 95/232 (40%), Positives = 127/232 (54%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I R+ S +P L++ +S L +E+Q IF P G
Sbjct: 794 PGDILLFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPAGS 853
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YNSK + SL IS+A+ QRAGRAG
Sbjct: 854 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAG 913
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLS-QL 194
RT PG+++ LY+E YR M +PEI R L +L K T + L
Sbjct: 914 RTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLATTVLQLK-------TMGINDLLHFDF 966
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+ P S+ A +L + D E LT LG+R+A P P LSK L+ SV
Sbjct: 967 MDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPLEPNLSKMLIMSV 1018
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 352 (129.0 bits), Expect = 9.0e-31, P = 9.0e-31
Identities = 92/239 (38%), Positives = 132/239 (55%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS---------AIPGLLVTMAHSKLDTEVQGAIFGHPPPG 75
PG IL FL G +I +L + P L++ +S L +E+Q IF PPG
Sbjct: 839 PGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPG 898
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
RK +L+TN+AE S+TID + +V+D G K +Y+SK D+ SL IS+A+ QRAGRA
Sbjct: 899 CRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRA 958
Query: 136 GRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLS-Q 193
GRT PG+ + LY+E+ Y+ M+E S+PEI R L I+L K +L + FL
Sbjct: 959 GRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLK---AL----GINDFLHFD 1011
Query: 194 LPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+ P ++ + L +G D LT LGK++A P P LSK L+ S+ + NC
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNF--NC 1068
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 352 (129.0 bits), Expect = 9.0e-31, P = 9.0e-31
Identities = 92/239 (38%), Positives = 132/239 (55%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS---------AIPGLLVTMAHSKLDTEVQGAIFGHPPPG 75
PG IL FL G +I +L + P L++ +S L +E+Q IF PPG
Sbjct: 839 PGDILVFLTGQDEINTACEILHERMKKLESMSPPPLIILPIYSSLPSEMQSVIFEPAPPG 898
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
RK +L+TN+AE S+TID + +V+D G K +Y+SK D+ SL IS+A+ QRAGRA
Sbjct: 899 CRKCILATNIAEASLTIDGIFFVIDPGFCKIKKYDSKRDMDSLIVAPISKANAKQRAGRA 958
Query: 136 GRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLS-Q 193
GRT PG+ + LY+E+ Y+ M+E S+PEI R L I+L K +L + FL
Sbjct: 959 GRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINLGSIVLLLK---AL----GINDFLHFD 1011
Query: 194 LPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+ P ++ + L +G D LT LGK++A P P LSK L+ S+ + NC
Sbjct: 1012 FMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANFPMEPNLSKILLTSLNF--NC 1068
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 343 (125.8 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 77/176 (43%), Positives = 103/176 (58%)
Query: 68 IFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRAS 127
+F PPG+RK +LSTN+AETS+TID + +VVD+G KE Y+ + L L WIS+AS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 128 VNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERC 187
QR GRAGRT PG F LY+E Y A Y +PEI R L+ ++L K S+ R
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFAPYPVPEIRRVALDSLVLQMK-SMSV-GDPRT 457
Query: 188 SSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
F+ EPP PAS+ +A L+ G D E LTP+G +A +P + K L+
Sbjct: 458 FPFI----EPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLI 509
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 350 (128.3 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 88/231 (38%), Positives = 127/231 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG +L FL G ++I +L ++P L++ +S L +E+Q IF PPG
Sbjct: 785 PGDMLLFLTGQEEIDTACEILYERMKALGPSVPELVILPVYSALPSEMQSRIFDPAPPGG 844
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETSITID++ YV+D G K+ Y+ K + SL IS+A QRAGRAG
Sbjct: 845 RKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDPKLGMDSLVVTPISQAQAKQRAGRAG 904
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ F LY+E Y+ M ++P+I R+ L +L K F
Sbjct: 905 RTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSHTILMLKA----MGINDLLHF--DFM 958
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP ++ +A EL + D E LT LG+++A P P L+K L+ SV
Sbjct: 959 DPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPALAKVLIASV 1009
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 349 (127.9 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 94/249 (37%), Positives = 136/249 (54%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDI------IQ-VSRVL-SAIPGLLVTM 55
NYL TT F H PG IL FL G ++I +Q +R L + IP +++
Sbjct: 672 NYLAAAITTVF-QIHVS--QGPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICP 728
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L +++Q IF PP RKVVL+TN+AETS+TID + YV+D G KE +N + +
Sbjct: 729 IYANLPSDLQAKIFEPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGM 788
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSE-DRYRRMAEYSLPEIFRKPLEQILLT 174
SL SRAS NQRAGRAGR PG+ F LY++ Y + E + PEI R L ++L
Sbjct: 789 ESLVVTPCSRASANQRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILM 848
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
K SL ++ F +PP +I A +L +G + LT +G+++A P
Sbjct: 849 LK---SL-GIDQLLEF--DFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQMAEFPT 902
Query: 235 HPKLSKALV 243
P L+KA++
Sbjct: 903 DPMLAKAIL 911
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 348 (127.6 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 92/234 (39%), Positives = 131/234 (55%)
Query: 25 PGAILCFLPGWQDI------IQ--VSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG +L FL G ++I +Q R+ S I LLV ++ L +++Q IF PPG
Sbjct: 621 PGDVLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPIYANLPSDMQAKIFNPTPPGA 680
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YV+D G K+ YN+K + SL SRAS NQRAGRAG
Sbjct: 681 RKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGMESLIVTPCSRASANQRAGRAG 740
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ ++ M E ++PEI R L ++L K SL + F
Sbjct: 741 RVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLLK---SLGINDLIH-F--DFM 794
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+PP ++ A +L +G + LT LG+R+A +P P LSK ++ S YK
Sbjct: 795 DPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLSKMILASEQYK 848
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 350 (128.3 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 85/231 (36%), Positives = 129/231 (55%)
Query: 27 AILCFLPGWQDIIQVSRVLSAIP----GLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLS 82
AIL FLPG +I +++ L + P G ++ HS + ++ Q F PP GMRK+V++
Sbjct: 921 AILVFLPGMAEIRRLNDELLSEPTFQHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVIA 980
Query: 83 TNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGE 142
TN+AET ITI D+ V+D G K R++ + L L +ISRA+ QR GRAGR + G
Sbjct: 981 TNIAETGITIPDITAVIDAGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGI 1040
Query: 143 SFHLYSEDRYRRM-AEYSLPEIFRKPLEQILLT---CKVGESLYSTERCSSFLSQLPEPP 198
FH++++ R+ + AE PE+ R L+ ++L CK+GE E + L L +PP
Sbjct: 1041 CFHMFTKHRHDNLLAEQQTPEMLRLSLQDLVLRVKICKLGE----VE--PTLLEAL-DPP 1093
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+I A LK + ENLTPLG+++A +P L K ++ +K
Sbjct: 1094 SSKNIRRAIDALKEVKALTSTENLTPLGQQLAKLPLDVFLGKLIIHGAFFK 1144
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 349 (127.9 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 90/231 (38%), Positives = 131/231 (56%)
Query: 27 AILCFLPGWQDIIQVSRVL----SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLS 82
AIL FLPG +I ++ +L S LV HS + TE Q A F PP GMRK+VL+
Sbjct: 969 AILVFLPGIAEIRTLNDLLLGDRSFQQNWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLA 1028
Query: 83 TNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGE 142
TN+AET ITI DV V+DTG H+E R++ + + L + +ISRA+ QR GRAGR + G
Sbjct: 1029 TNIAETGITIPDVTCVIDTGKHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGL 1088
Query: 143 SFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLT---CKVGESLYSTERCSSFLSQLPEPP 198
FH++++ R+ MA+ PE+ R L+ + + CK+G + T LS+ +PP
Sbjct: 1089 CFHMFTKYRHDAIMADQQTPEMLRLSLQDLAIRVKICKIG-GIEET------LSKALDPP 1141
Query: 199 DPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+I A L + Q E+LTPLG ++A +P L K ++ I+K
Sbjct: 1142 SAKNIRRAIDALIDVRALTQGEDLTPLGNQLARLPLDVFLGKLILLGSIFK 1192
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 347 (127.2 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 85/233 (36%), Positives = 130/233 (55%)
Query: 26 GAILCFLPGWQDIIQVSRVLSA--------IPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G +++ Q + +L I L++T +S L T++Q IF PP R
Sbjct: 676 GDILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPPNAR 735
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVVL+TN+AETS+TID + YV+D G K+ +N + + SL +SRAS NQR GRAGR
Sbjct: 736 KVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGRAGR 795
Query: 138 TKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
PG+ F L++ + + E ++PEI R L ++L K S+ + +F +
Sbjct: 796 VAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLK---SMGIND-LMNF--DFMD 849
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PP ++ +A +L +G + LT LG+++A P P+LSK ++ S YK
Sbjct: 850 PPPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYK 902
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 346 (126.9 bits), Expect = 3.2e-30, P = 3.2e-30
Identities = 91/231 (39%), Positives = 122/231 (52%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L +I LL+ +S L +E+Q IF P G
Sbjct: 691 PGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIFEPTPKGS 750
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV +TN+AETSITID + YVVD G K YN++ + L IS+A NQR GRAG
Sbjct: 751 RKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQANQRKGRAG 810
Query: 137 RTKPGESFHLYSEDR-YRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E Y M E ++PEI R+ L +L K F
Sbjct: 811 RTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKA----MGINDLLKF--DFM 864
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
+PP + +A TEL + D E LT LGK ++ P P LS++L+ SV
Sbjct: 865 DPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSV 915
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 344 (126.2 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 96/254 (37%), Positives = 134/254 (52%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVS-------RVLSA-IPGLLVTM 55
NY+ TT H P+ G IL FL G +I +S R+L IP +++
Sbjct: 609 NYIQAAITTIL-QIHTTQPA--GDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCP 665
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L +E+Q IF PPG RKVVL+TN+AETSITID V +V+D+G K+ YN + +
Sbjct: 666 IYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGM 725
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEY-SLPEIFRKPLEQILLT 174
SL + SRAS +QRAGRAGR PG+ F LY+ Y + + PEI R L I+L
Sbjct: 726 ESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLL 785
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
K SL F + P P ++ + L +G + LT LG+++A P
Sbjct: 786 LK---SL-GINNLLDF--DFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPT 839
Query: 235 HPKLSKALVESVIY 248
P LSK+L+ S Y
Sbjct: 840 DPMLSKSLIASSKY 853
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 317 (116.6 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 77/202 (38%), Positives = 114/202 (56%)
Query: 22 PSFPGAILCFLPGWQDIIQVSRVLSA-------IPGLLVTMAHSKLDTEVQGAIFGHPPP 74
P F G IL FLPG++DI Q+ + + + ++V HS++ + G IF P
Sbjct: 642 PVF-GTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQMTSINHGDIFKSVPK 700
Query: 75 GMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
RK++L+TN+AE SITI+DV +VVDTG KE ++ + L +L + I+R++ +QR+GR
Sbjct: 701 DTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLTVKPIARSNADQRSGR 760
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGR G LY+E Y M E + E+ R + + L K+ T + S FLS
Sbjct: 761 AGRVANGYCIRLYTEQEYNSMPETQIAEMKRAAIYDVTLHAKLFAP--KTLKISEFLSLA 818
Query: 195 PEPPDPASITSAATELKLMGVF 216
PEPP+ SI A T L+ +G F
Sbjct: 819 PEPPEKESILQAITFLEQIGAF 840
Score = 57 (25.1 bits), Expect = 6.5e-30, Sum P(2) = 6.5e-30
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 218 QEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSKRE 265
++ LT LG+ +A +P P+LS+ L+ + K L+ + RE
Sbjct: 869 EDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASRE 916
Score = 38 (18.4 bits), Expect = 6.4e-28, Sum P(2) = 6.4e-28
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 216 FDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
F+Q P+ + + A C+P + + ES + K
Sbjct: 1013 FNQFSQCWPMIQAVIAAGCYPFIGVSASESNLKK 1046
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 342 (125.4 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 87/241 (36%), Positives = 129/241 (53%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIF 69
H P PG IL FL G ++I V L S I L+ ++ L +++Q IF
Sbjct: 568 HLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIF 626
Query: 70 GHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
P RKVVL+TN+AETS+TID + YV+D G K+ ++++ + L IS+A+ N
Sbjct: 627 EPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAAN 686
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS 188
QRAGRAGRT PG+ F LY+ Y+ + E +PEI R L ++L K ++
Sbjct: 687 QRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLK-SLGIHDLVHFD 745
Query: 189 SFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
FL +PP ++ A +L +G + LT LG+R+A PC P +SK ++ S Y
Sbjct: 746 -FL----DPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKY 800
Query: 249 K 249
+
Sbjct: 801 E 801
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 342 (125.4 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 87/241 (36%), Positives = 129/241 (53%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIF 69
H P PG IL FL G ++I V L S I L+ ++ L +++Q IF
Sbjct: 568 HLTQP-LPGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPVYANLPSDLQAKIF 626
Query: 70 GHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
P RKVVL+TN+AETS+TID + YV+D G K+ ++++ + L IS+A+ N
Sbjct: 627 EPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVEHLHVVTISKAAAN 686
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS 188
QRAGRAGRT PG+ F LY+ Y+ + E +PEI R L ++L K ++
Sbjct: 687 QRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLMLK-SLGIHDLVHFD 745
Query: 189 SFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
FL +PP ++ A +L +G + LT LG+R+A PC P +SK ++ S Y
Sbjct: 746 -FL----DPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMSKMIIASEKY 800
Query: 249 K 249
+
Sbjct: 801 E 801
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 341 (125.1 bits), Expect = 7.0e-30, P = 7.0e-30
Identities = 89/234 (38%), Positives = 132/234 (56%)
Query: 26 GAILCFLPGW------QDII--QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G Q+++ +V R+ S I L+V ++ L +++Q IF PP R
Sbjct: 462 GDILVFLTGQDEIETCQEVLHDRVKRLGSKIRELIVIPVYANLPSDMQAKIFEPTPPNAR 521
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+L+TN+AETS+TID++ YV+D G K+ +NS+ + SL IS+AS NQRAGRAGR
Sbjct: 522 KVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRTGMESLMVVPISKASANQRAGRAGR 581
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLP 195
T PG+ F LY+ Y+ + + ++PEI R L +L K +L + FL
Sbjct: 582 TAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAVLMLK---ALGINDLIHFDFL---- 634
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
+PP ++ A +L +G + LT LG+R+A P P + K L+ S YK
Sbjct: 635 DPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDPMMGKMLLASEKYK 688
>UNIPROTKB|G4NGS5 [details] [associations]
symbol:MGG_04040 "DEAH box polypeptide 37" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14780
RefSeq:XP_003719802.1 ProteinModelPortal:G4NGS5
EnsemblFungi:MGG_04040T0 GeneID:2677154 KEGG:mgr:MGG_04040
Uniprot:G4NGS5
Length = 1185
Score = 320 (117.7 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 74/188 (39%), Positives = 109/188 (57%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
+S L T+ Q +F PP G R VVL+TNVAETS+TI + YV D+G KE +Y+ +
Sbjct: 681 YSLLPTKEQLRVFEPPPDGSRLVVLATNVAETSLTIPGIRYVFDSGRSKERKYDQLTGVQ 740
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTC 175
S + WIS+AS NQR GRAGRT PG + LYS Y R + E++LPE+ R LE ++L
Sbjct: 741 SFEVGWISKASANQREGRAGRTGPGHCWRLYSSAVYERDLDEFALPELLRTSLEGVVLQL 800
Query: 176 KVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCH 235
K S+ + + +F P PP+ S+ + LK + +E +T +G ++ P
Sbjct: 801 K---SM-NLQHVVNF--PFPTPPERDSLVKSEKLLKYISAVSEEGRVTQVGYTMSIFPLS 854
Query: 236 PKLSKALV 243
P+ S+ L+
Sbjct: 855 PRFSRILL 862
Score = 48 (22.0 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 25 PGAILCFLPGWQDIIQVSRVL 45
PG +L FL G +I Q+S+ L
Sbjct: 583 PGGMLVFLTGQNEITQLSKRL 603
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 336 (123.3 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 85/225 (37%), Positives = 121/225 (53%)
Query: 26 GAILCFLPGWQDIIQVSRVL--SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G+IL FLPG +I + + S+ + HS L + Q +IF P G RKVV+ST
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVST 880
Query: 84 NVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGES 143
N+AETSITI D V+DTG K ++ K + L W S+A V QR GRAGR G
Sbjct: 881 NIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTC 940
Query: 144 FHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASI 203
+HLY+++ + M + +PEI R LE + L K S+ + FLS + PD +S+
Sbjct: 941 YHLYTKETFEAMQKQPIPEIKRTRLENLYLVVK---SM-GISNVNEFLSSGLDAPDKSSL 996
Query: 204 TSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
A L +G QE +LT LG I+ +P P+ +K L+ I+
Sbjct: 997 DKANQFLHEIGAL-QENSLTKLGNYISYLPTDPQSAKLLILGCIF 1040
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 336 (123.3 bits), Expect = 5.0e-29, P = 5.0e-29
Identities = 85/225 (37%), Positives = 121/225 (53%)
Query: 26 GAILCFLPGWQDIIQVSRVL--SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G+IL FLPG +I + + S+ + HS L + Q +IF P G RKVV+ST
Sbjct: 821 GSILIFLPGVLEISSTIKEINKSSDNKFMALPLHSGLTSAEQKSIFKTAPKGKRKVVVST 880
Query: 84 NVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGES 143
N+AETSITI D V+DTG K ++ K + L W S+A V QR GRAGR G
Sbjct: 881 NIAETSITIPDCVAVIDTGKSKNLFFDHKLNTTKLIESWCSQAEVRQRRGRAGRVTAGTC 940
Query: 144 FHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASI 203
+HLY+++ + M + +PEI R LE + L K S+ + FLS + PD +S+
Sbjct: 941 YHLYTKETFEAMQKQPIPEIKRTRLENLYLVVK---SM-GISNVNEFLSSGLDAPDKSSL 996
Query: 204 TSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
A L +G QE +LT LG I+ +P P+ +K L+ I+
Sbjct: 997 DKANQFLHEIGAL-QENSLTKLGNYISYLPTDPQSAKLLILGCIF 1040
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 335 (123.0 bits), Expect = 5.2e-29, P = 5.2e-29
Identities = 90/231 (38%), Positives = 124/231 (53%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG +L FL G ++I + R+ S +P L++ + L +E+Q IF P G
Sbjct: 748 PGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK 807
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YN K + SL IS+A+ QR+GRAG
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAG 867
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E +R M +PEI R L LL K F +
Sbjct: 868 RTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKA----MGINNLIDF-DFMD 922
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP + IT+ T L + D + LT LG+R+A P P LSK L+ SV
Sbjct: 923 APPLDSMITALNT-LHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSV 972
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 335 (123.0 bits), Expect = 5.2e-29, P = 5.2e-29
Identities = 90/231 (38%), Positives = 124/231 (53%)
Query: 25 PGAILCFLPGWQDI-----IQVSRVLSA---IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG +L FL G ++I + R+ S +P L++ + L +E+Q IF P G
Sbjct: 748 PGDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGK 807
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TID + YVVD G K+ YN K + SL IS+A+ QR+GRAG
Sbjct: 808 RKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAG 867
Query: 137 RTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT PG+ + LY+E +R M +PEI R L LL K F +
Sbjct: 868 RTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKA----MGINNLIDF-DFMD 922
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
PP + IT+ T L + D + LT LG+R+A P P LSK L+ SV
Sbjct: 923 APPLDSMITALNT-LHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSV 972
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 318 (117.0 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 75/194 (38%), Positives = 108/194 (55%)
Query: 51 LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYN 110
+ V +S L TE Q +F P G R +++TNVAETSITI ++ YVVD G KE YN
Sbjct: 702 MYVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYN 761
Query: 111 SKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLE 169
K + + +WIS+A+ +QRAGRAGRT PG + LYS + +SLPEI R P+E
Sbjct: 762 EKTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVE 821
Query: 170 QILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRI 229
I+L K + + ++F P P + + + L +G D E LT LG+++
Sbjct: 822 SIVLQMKN----MNIDNIANF--PFPTSPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQM 875
Query: 230 AAMPCHPKLSKALV 243
+ P P+ SK L+
Sbjct: 876 SLFPLSPRFSKMLI 889
Score = 45 (20.9 bits), Expect = 5.3e-29, Sum P(2) = 5.3e-29
Identities = 9/20 (45%), Positives = 15/20 (75%)
Query: 26 GAILCFLPGWQDIIQVSRVL 45
G+IL FL G Q++ Q+ ++L
Sbjct: 625 GSILVFLTGQQEVEQLCQML 644
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 332 (121.9 bits), Expect = 8.6e-29, P = 8.6e-29
Identities = 93/233 (39%), Positives = 126/233 (54%)
Query: 26 GAILCFLPGWQDIIQVSRVLS-AIPGL-------LVTMAHSKLDTEVQGAIFGHPPPGMR 77
G +L FLPG ++I V L I GL ++ ++ L +E+Q IF P G R
Sbjct: 613 GDVLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVVL+TN+AETS+TID + YVVD G K YN + + SL IS+AS QR GRAGR
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGRAGR 732
Query: 138 TKPGESFHLYSE-DRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ + LY+ + Y + + ++PEI R L ++L+ K SL +F P
Sbjct: 733 TSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLK---SL-GIHNLLNFDFMDP- 787
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PP A I S L +G +Q LT G+R+A P P LSK +V S YK
Sbjct: 788 PPSEALIKSLEL-LFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYK 839
>UNIPROTKB|F1PRA1 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045943 "positive regulation of transcription
from RNA polymerase I promoter" evidence=IEA] [GO:0033613
"activating transcription factor binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000182 "rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AAEX03003580
Ensembl:ENSCAFT00000024626 Uniprot:F1PRA1
Length = 616
Score = 325 (119.5 bits), Expect = 1.4e-28, P = 1.4e-28
Identities = 90/257 (35%), Positives = 135/257 (52%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVT 54
++YL+ + F H PS IL FL G ++I VS+ I P +LV
Sbjct: 177 QDYLHAALVSVF-QIHQEAPSSQD-ILVFLTGQEEIEAVSKTCRDIAKHLPDGCPSMLVL 234
Query: 55 MAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDD 114
++ L Q +F P G RKV+++TN+AETSITI + YVVDTG K +YN
Sbjct: 235 PLYASLPYAQQLRVFQGAPKGCRKVIIATNIAETSITITGIKYVVDTGMVKAKKYNPDSG 294
Query: 115 LVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILL- 173
L L Q +S+ QRAGRAGR G + LY+E+ + + + ++PEI R L +LL
Sbjct: 295 LEVLAVQRVSKTQAWQRAGRAGREDSGICYRLYTENEFEKFEKMTVPEIQRCNLASVLLQ 354
Query: 174 --TCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKR 228
KV L F+S+ P P + +A +L L+G ++++N LTP+G++
Sbjct: 355 LLAMKVPNVL-----TFDFMSK----PSPDHMQAAVAQLDLLGALERKDNQLTLTPIGRK 405
Query: 229 IAAMPCHPKLSKALVES 245
+AA P PK +K ++ S
Sbjct: 406 MAAFPLEPKFAKTILLS 422
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 328 (120.5 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 84/237 (35%), Positives = 132/237 (55%)
Query: 25 PGAILCFLPGWQDIIQVS-------RVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+ G +DI ++L+ P L + +S++ E Q IF PG+R
Sbjct: 396 PGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPIYSQMPAEQQAKIFERAAPGVR 455
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+++TN+AETS+T+D + +VVD+G K YN K + +L IS+A+ NQR+GRAGR
Sbjct: 456 KVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMDTLQITPISQANANQRSGRAGR 515
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+++ LY+E Y+ M ++PEI R L +L K SL + F +
Sbjct: 516 TGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLLK---SL-GVKDLLDF--DFMD 569
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNCN 253
PP +I+++ EL +G D +LT LG+++ P P L+K ++ + G C+
Sbjct: 570 PPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPLAKLIITAAEQYG-CS 625
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 326 (119.8 bits), Expect = 2.0e-28, P = 2.0e-28
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 279 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 338
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 339 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 398
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K SL + F +
Sbjct: 399 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-GVQDLLQF--HFMD 452
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 453 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 501
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/145 (43%), Positives = 95/145 (65%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
HS + T Q +F PPG+RK+V++TN+AETSITIDDV YV+D G KET +++++++
Sbjct: 5 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 64
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK 176
++ +W+S+A+ QR GRAGR +PG +HLY+ R + +Y LPEI R PLE++ L K
Sbjct: 65 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIK 124
Query: 177 VGESLYSTERCSSF---LSQLPEPP 198
+L E + L++LP P
Sbjct: 125 --NALDKQEELTPLGVHLARLPVEP 147
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 323 (118.8 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 88/245 (35%), Positives = 127/245 (51%)
Query: 15 YSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVTMAHSKLDTEVQG 66
+ H PS IL FL G ++I +++ I P + V ++ L Q
Sbjct: 229 FQIHQEAPSSQD-ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQMTVMPLYASLPYSQQL 287
Query: 67 AIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRA 126
+F P G RKV+LSTN+AETSITI + YVVDTG K +YN + L L Q +S+A
Sbjct: 288 RVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNPEIGLEVLAVQRVSKA 347
Query: 127 SVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYS--T 184
QR GRAGR G + LY+ED + + + ++PEI Q L C + L
Sbjct: 348 QAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEI------QSLCRCNLASVLLQLLA 401
Query: 185 ERCSSFLS-QLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKRIAAMPCHPKLSK 240
R + L+ P P +I +A +L L+G +Q+E+ LTPLG+++AA P PK SK
Sbjct: 402 LRIPNILTFDFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRKMAAFPLEPKFSK 461
Query: 241 ALVES 245
++ S
Sbjct: 462 TILLS 466
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 320 (117.7 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 300
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 301 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 353
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 320 (117.7 bits), Expect = 3.4e-28, P = 3.4e-28
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 127 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 186
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 187 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 246
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 247 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 300
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 301 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 353
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 321 (118.1 bits), Expect = 3.9e-28, P = 3.9e-28
Identities = 90/256 (35%), Positives = 132/256 (51%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVTM 55
+YL+ + F H PS IL FL G ++I +S+ I P +LV
Sbjct: 179 DYLHAALVSVF-QIHQEAPSSQD-ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLP 236
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN L
Sbjct: 237 LYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGL 296
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---L 172
L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L + L
Sbjct: 297 EVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQL 356
Query: 173 LTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKRI 229
L KV L F+S+ P P I +A +L L+G + +++ LTP+G+++
Sbjct: 357 LAMKVPNVL-----TFDFMSK----PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKM 407
Query: 230 AAMPCHPKLSKALVES 245
AA P PK +K ++ S
Sbjct: 408 AAFPLEPKFAKTILMS 423
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 327 (120.2 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 80/248 (32%), Positives = 124/248 (50%)
Query: 18 HFPCPSFPGAILCFLPGWQDIIQVSRVLSAIPGLL----------------VTMAHSKLD 61
H + PG IL FLPG ++I V+ VL G L + HS +
Sbjct: 864 HIASSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSKFRIHFLHSAVS 923
Query: 62 TEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQ 121
Q IF P G R+++L++N+AETS+TI DV +VVD G ++ +Y+ + +
Sbjct: 924 AAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYDRSTRITGMYTG 983
Query: 122 WISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESL 181
W +++ QR GRAGRT+ G + LYSE R + M + +LPE+ + L L+ K G
Sbjct: 984 WQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQSMKDDALPEMLKLDLTNTCLSVK-GFGF 1042
Query: 182 YSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKA 241
+ + FL+ PP P+ + A LK M + E +T LG + +P HP L K
Sbjct: 1043 --RDSVADFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRIPLHPLLGKM 1100
Query: 242 LVESVIYK 249
++ V ++
Sbjct: 1101 ILLGVFFR 1108
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 327 (120.2 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 95/253 (37%), Positives = 133/253 (52%)
Query: 4 NY-LYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL---SAIPGLLVTMAHSK 59
NY L C Q + + G+I+ FLPG +I + +L S +V HS
Sbjct: 842 NYDLLC-QVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSNEADFMVLPLHSA 900
Query: 60 LDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLD 119
L E Q +F G RKVV+STN+AETSITIDD +DTG K YN KD+ L
Sbjct: 901 LTPEDQKRVF-KKYHGKRKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLI 959
Query: 120 NQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVG 178
+IS+A V QR GRAGR + G S+ L+S++ Y M +PEI R PLE + L+ K
Sbjct: 960 ESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKA- 1018
Query: 179 ESLYSTERCSSFLSQ-LPEPPDPASITSAATELKLMGVFDQ-EENLTPLGKRIAAMPC-H 235
+ +FLS L PP PA + A L +G+ D+ +++LT LG+ I+ MP
Sbjct: 1019 ---MGIKDVKAFLSTALDAPPLPA-LQKAERILTTIGLVDESDKSLTQLGQFISLMPVMD 1074
Query: 236 PKLSKALVESVIY 248
K K L+ +++
Sbjct: 1075 SKHGKLLIYGILF 1087
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 326 (119.8 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 739 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 798
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 799 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 858
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K SL + F +
Sbjct: 859 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-GVQDLLQF--HFMD 912
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 913 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 961
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 326 (119.8 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K SL + F +
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-GVQDLLQF--HFMD 913
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 914 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 326 (119.8 bits), Expect = 4.9e-28, P = 4.9e-28
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 740 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 799
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 800 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 859
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K SL + F +
Sbjct: 860 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-GVQDLLQF--HFMD 913
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 914 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 962
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 326 (119.8 bits), Expect = 5.0e-28, P = 5.0e-28
Identities = 79/229 (34%), Positives = 127/229 (55%)
Query: 25 PGAILCFLPGWQDI-------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL F+PG +DI ++ L P L V +S+L +++Q IF P G+R
Sbjct: 741 PGDILIFMPGQEDIEVTSDQIVEHLEELENAPALAVLPIYSQLPSDLQAKIFQKAPDGVR 800
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + +V+D+G K +N + + +L IS+A+ NQR+GRAGR
Sbjct: 801 KCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPISQANANQRSGRAGR 860
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ F LY++ Y+ + ++PEI R L ++L K SL + F +
Sbjct: 861 TGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-GVQDLLQF--HFMD 914
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP ++ ++ +L ++G D LT G+ + P P LSK L+ S
Sbjct: 915 PPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLIVS 963
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 326 (119.8 bits), Expect = 5.1e-28, P = 5.1e-28
Identities = 82/228 (35%), Positives = 128/228 (56%)
Query: 26 GAILCFLPGWQDIIQVS-----RV--LSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G IL F+PG +DI S R+ L P L V +S+L +++Q IF P G+RK
Sbjct: 772 GDILIFMPGQEDIEVTSDQIVERLADLENAPALAVLPIYSQLPSDLQAKIFQKAPDGVRK 831
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+++TN+AETS+T+D + +VVD+G K +N + + +L IS+A+ NQRAGRAGRT
Sbjct: 832 CIVATNIAETSLTVDGIMFVVDSGYCKLKVFNPRIGMDALQVYPISQANANQRAGRAGRT 891
Query: 139 KPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG+ + LY++ ++ M ++PEI R L ++L K SL + L +P
Sbjct: 892 GPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLANVVLLLK---SLGVQDL---LLFHFMDP 945
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
P ++ ++ +L ++G D LTP G+ + P P LSK L+ S
Sbjct: 946 PPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPLDPALSKMLIVS 993
>DICTYBASE|DDB_G0287351 [details] [associations]
symbol:dhx37 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=ISS] [GO:0005732 "small nucleolar ribonucleoprotein
complex" evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0287351
GO:GO:0005524 GO:GO:0005730 GenomeReviews:CM000154_GR GO:GO:0003676
GO:GO:0042254 EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0003724 KO:K14780 GO:GO:0005732
RefSeq:XP_637255.1 STRING:Q54KG8 EnsemblProtists:DDB0235265
GeneID:8626085 KEGG:ddi:DDB_G0287351 InParanoid:Q54KG8 OMA:HERNLNT
Uniprot:Q54KG8
Length = 1461
Score = 316 (116.3 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 79/212 (37%), Positives = 119/212 (56%)
Query: 34 GWQDIIQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITID 93
G +DII A P L V +S L T Q +F PP G R VV++TN+AETS+TI
Sbjct: 830 GKEDIITEDDEKPAGP-LFVLPLYSTLPTSKQMRVFQTPPLGSRLVVVATNLAETSLTIP 888
Query: 94 DVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR 153
++ YVVDTG K+ YN + + S + W S+AS +QRAGRAGRT PG + +YS +
Sbjct: 889 NIKYVVDTGRVKQRYYNKDNGISSFEVGWTSKASADQRAGRAGRTGPGHCYRIYSSAVFN 948
Query: 154 -RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKL 212
++S PEI P++ ++L K S+ ++ + F P PPD +S+ A L
Sbjct: 949 DHFQQFSKPEILMIPIDGMILQMK---SM-GIQKITGF--PFPTPPDESSLKLALRTLIN 1002
Query: 213 MGVFDQEE-NLTPLGKRIAAMPCHPKLSKALV 243
+G + + ++T LG +++ P P+ SK L+
Sbjct: 1003 LGALEVKTFSITELGMKMSQFPVSPRHSKMLL 1034
Score = 40 (19.1 bits), Expect = 5.4e-28, Sum P(2) = 5.4e-28
Identities = 16/48 (33%), Positives = 24/48 (50%)
Query: 4 NYL-YCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIP 49
NY+ C++ H PS G IL F+ G Q+I + S++ A P
Sbjct: 629 NYIDECYKKVV--KIHKNLPS--GGILVFVTGKQEIEYLCSKLRRAFP 672
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 325 (119.5 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 80/228 (35%), Positives = 126/228 (55%)
Query: 26 GAILCFLPGWQDIIQVSRV-------LSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G IL F+PG +DI + L P L V +S+L +++Q IF P GMRK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+++TN+AETS+T+D + +V+D G K YN + + +L +S+AS NQR GRAGRT
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG+ + LY+E +++ + + ++PEI R L ++L K SL + P P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLK---SLGVDDLLKFHFMDAP-P 826
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
D ++ ++ +L +G D LTP+G+++ P P LSK L+ S
Sbjct: 827 QD--NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMS 872
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 325 (119.5 bits), Expect = 5.5e-28, P = 5.5e-28
Identities = 80/228 (35%), Positives = 126/228 (55%)
Query: 26 GAILCFLPGWQDIIQVSRV-------LSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G IL F+PG +DI + L P L V +S+L +++Q IF P GMRK
Sbjct: 651 GDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPIYSQLPSDLQAKIFQRAPGGMRK 710
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+++TN+AETS+T+D + +V+D G K YN + + +L +S+AS NQR GRAGRT
Sbjct: 711 AIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMDALSIFPVSQASANQRTGRAGRT 770
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG+ + LY+E +++ + + ++PEI R L ++L K SL + P P
Sbjct: 771 GPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLLK---SLGVDDLLKFHFMDAP-P 826
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
D ++ ++ +L +G D LTP+G+++ P P LSK L+ S
Sbjct: 827 QD--NMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLSKMLIMS 872
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 321 (118.1 bits), Expect = 5.8e-28, P = 5.8e-28
Identities = 90/256 (35%), Positives = 132/256 (51%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVTM 55
+YL+ + F H PS IL FL G ++I +S+ I P +LV
Sbjct: 269 DYLHAALVSVF-QIHQEAPSSQD-ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAMLVLP 326
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN L
Sbjct: 327 LYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGL 386
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---L 172
L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L + L
Sbjct: 387 EVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDKMTVPEIQRCNLASVMLQL 446
Query: 173 LTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKRI 229
L KV L F+S+ P P I +A +L L+G + +++ LTP+G+++
Sbjct: 447 LAMKVPNVL-----TFDFMSK----PSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKM 497
Query: 230 AAMPCHPKLSKALVES 245
AA P PK +K ++ S
Sbjct: 498 AAFPLEPKFAKTILMS 513
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 324 (119.1 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 94/249 (37%), Positives = 133/249 (53%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDI----IQVS---RVL-SAIPGLLVTM 55
NYL TT F H P G IL FL G +I +Q++ R L S + L++
Sbjct: 564 NYLSAAITTVF-QIHTTQPK--GDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICP 620
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L +E+Q IF P RKVVL+TN+AETS+TID + YV+D G KE YN +
Sbjct: 621 IYANLPSELQSKIFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGM 680
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLT 174
+L SRAS NQR+GRAGR PG+ F LY++ Y M E + PEI R L ++L
Sbjct: 681 SNLVVVPCSRASANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQ 740
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
K SL E F + +PP ++ A +L + + + LT LG+++A P
Sbjct: 741 LK---SLGINELLD-F--EFMDPPPTEALIGALNQLFALQGLNHKGELTKLGRQMAEFPT 794
Query: 235 HPKLSKALV 243
P L+KA++
Sbjct: 795 DPMLAKAVL 803
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 321 (118.1 bits), Expect = 5.9e-28, P = 5.9e-28
Identities = 89/256 (34%), Positives = 131/256 (51%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVTM 55
+YL+ + F H PS IL FL G ++I +S+ I P +LV
Sbjct: 276 DYLHAALVSVF-QIHQEAPSSHD-ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLP 333
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN L
Sbjct: 334 LYASLPYAQQLRVFQRAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGL 393
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI---L 172
L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L + L
Sbjct: 394 EVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVMLQL 453
Query: 173 LTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKRI 229
L K+ L F+S+ P P I +A +L+L+G + + LTP+G+++
Sbjct: 454 LAMKIPNVL-----TFDFMSK----PSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKM 504
Query: 230 AAMPCHPKLSKALVES 245
AA P PK +K ++ S
Sbjct: 505 AAFPLEPKFAKTILLS 520
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 326 (119.8 bits), Expect = 6.0e-28, P = 6.0e-28
Identities = 78/227 (34%), Positives = 128/227 (56%)
Query: 26 GAILCFLPGWQDII--------QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL F+ G +DI ++ ++ P L + +S+L +++Q IF G R
Sbjct: 868 GDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLPIYSQLPSDMQAKIFEKADNGSR 927
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
K +++TN+AETS+T+D + YV+DTG K YN + + SL IS+A+ NQR+GRAGR
Sbjct: 928 KCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGMDSLQVTPISKANANQRSGRAGR 987
Query: 138 TKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG + LY+E ++ + + ++PEI R L ++L K S+ + F +
Sbjct: 988 TGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLNLK---SM-GVKNLLDF--DFMD 1041
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
PP +I ++ +L ++G D + +TPLGKR++ P P LSK ++
Sbjct: 1042 PPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPPLSKMVI 1088
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 320 (117.7 bits), Expect = 7.2e-28, P = 7.2e-28
Identities = 80/230 (34%), Positives = 122/230 (53%)
Query: 26 GAILCFLPGWQDIIQ-VSRVLSAIPGL--------LVTMAHSKLDTEVQGAIFGHPPPGM 76
G IL F+ G DI + VSR+ + L ++ H L E+Q +F PPP
Sbjct: 214 GDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRVFSPPPPNC 273
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
R+ ++STN+AETS+T+D V YV+D+G K+ +YN + SLD IS+ NQRAGRAG
Sbjct: 274 RRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQANQRAGRAG 333
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
RT+PG+ + LY YR + ++PEI R L +L K SL +
Sbjct: 334 RTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLK---SLDLPD-IDILKFDFL 389
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
+ P S+ A +L + D+ +T +G+ ++ +P P LS+ L+E+
Sbjct: 390 DAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEA 439
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 323 (118.8 bits), Expect = 7.9e-28, P = 7.9e-28
Identities = 87/233 (37%), Positives = 123/233 (52%)
Query: 26 GAILCFLPGWQDIIQVSRVLS-AIPGL-------LVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL F G ++I +L I GL ++ ++ L +E+Q IF P G R
Sbjct: 613 GDILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPIYANLPSELQAKIFEPTPEGAR 672
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVVL+TN+AETS+TID + YVVD G K YN + + SL IS+AS QRAGRAGR
Sbjct: 673 KVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLITPISKASATQRAGRAGR 732
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
T PG+ + LY+ Y + E ++PE+ R L ++L K SL +F +
Sbjct: 733 TSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLALK---SL-GIHDLINF--DFMD 786
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
PP ++ + L +G ++ LT G+R+A P P LSK +V S YK
Sbjct: 787 PPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLSKMIVVSDKYK 839
>TAIR|locus:2007003 [details] [associations]
symbol:FAS4 "FASCIATED STEM 4" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GO:GO:0005524 GO:GO:0003676 EMBL:AC051630
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000201240 KO:K14780
IPI:IPI00531863 PIR:E86457 RefSeq:NP_174605.1 UniGene:At.39951
ProteinModelPortal:Q9C813 SMR:Q9C813 STRING:Q9C813 PRIDE:Q9C813
EnsemblPlants:AT1G33390.1 GeneID:840232 KEGG:ath:AT1G33390
TAIR:At1g33390 InParanoid:Q9C813 OMA:EVQWISK PhylomeDB:Q9C813
ProtClustDB:CLSN2693169 Genevestigator:Q9C813 Uniprot:Q9C813
Length = 1237
Score = 324 (119.1 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 83/210 (39%), Positives = 117/210 (55%)
Query: 36 QDIIQVSRVLSAIPGLL-VTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDD 94
Q+ QV S PG L V ++ L Q +F R VV++TNVAETS+TI
Sbjct: 633 QEAEQVKNKFS--PGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNVAETSLTIPG 690
Query: 95 VAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR 154
+ YVVDTG K Y+SK + S + WIS+AS +QRAGRAGRT PG + LYS +
Sbjct: 691 IKYVVDTGRVKVKNYDSKTGMESYEVDWISQASASQRAGRAGRTGPGHCYRLYSSAVFSN 750
Query: 155 M-AEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLM 213
+ E SLPEI + P++ ++L K S+ + + +F P PP+P++I A LK +
Sbjct: 751 IFEESSLPEIMKVPVDGVILLMK---SM-NIPKVENF--PFPTPPEPSAIREAERCLKAL 804
Query: 214 GVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
D LTPLGK ++ P P+ S+ L+
Sbjct: 805 EALDSNGGLTPLGKAMSHYPMSPRHSRMLL 834
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 317 (116.6 bits), Expect = 1.5e-27, P = 1.5e-27
Identities = 88/257 (34%), Positives = 133/257 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVLSAI--------PGLLVT 54
++YL+ + F H P+ IL FL G ++I +S+ I P +LV
Sbjct: 259 QDYLHAALVSVF-QIHQEAPASQD-ILVFLTGQEEIEAMSKTCRDIARHLPDGCPSMLVL 316
Query: 55 MAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDD 114
++ L Q +F P G RKV++STN+AETSITI + YVVDTG K +YN
Sbjct: 317 PLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSG 376
Query: 115 LVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQI--- 171
L L Q +S+ QR GRAGR G + LY+ED + + + ++PEI R L +
Sbjct: 377 LEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEKMTVPEIQRCNLASVILQ 436
Query: 172 LLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---LTPLGKR 228
LL KV L F+S+ P P I +A +L L+G + +++ LTP+G++
Sbjct: 437 LLAMKVPNVL-----TFDFMSK----PSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRK 487
Query: 229 IAAMPCHPKLSKALVES 245
+AA P P+ +K ++ S
Sbjct: 488 MAAFPLEPRFAKTILLS 504
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 608 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 667
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 668 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 727
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 728 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 781
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 782 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 834
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 609 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 668
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 669 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 728
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 729 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 782
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 783 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 835
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 611 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 670
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 671 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 730
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 731 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 784
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 785 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 837
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 785
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 786 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 838
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 785
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 786 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 838
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 320 (117.7 bits), Expect = 1.7e-27, P = 1.7e-27
Identities = 85/233 (36%), Positives = 126/233 (54%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I +L S I LLV ++ L +++Q IF PPG
Sbjct: 612 PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGA 671
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKVV++TN+AETS+TI+ + YV+D G K+ YN + + SL S+AS NQRAGRAG
Sbjct: 672 RKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKASANQRAGRAG 731
Query: 137 RTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
R G+ F LY+ Y+ + E ++PEI R L ++L K ++ FL
Sbjct: 732 RVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLK-SLGIHDLMHFD-FL---- 785
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+PP ++ A +L +G + LT G+++A +P P LSK ++ S Y
Sbjct: 786 DPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKY 838
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 317 (116.6 bits), Expect = 1.9e-27, P = 1.9e-27
Identities = 96/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ I L +
Sbjct: 296 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKII 353
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 354 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 413
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 414 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 473
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 474 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 525
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 526 GSMMAEFPLDPQLAKMVIASCDY--NCS 551
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 316 (116.3 bits), Expect = 2.6e-27, P = 2.6e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ + L +
Sbjct: 329 RDYLEAAIRTVI-QIHM-CEEEEGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKII 386
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 387 PLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 446
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 447 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 506
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 507 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 558
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S Y NC+
Sbjct: 559 GSMMAEFPLDPQLAKMVIASCDY--NCS 584
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 314 (115.6 bits), Expect = 3.6e-27, P = 3.6e-27
Identities = 89/247 (36%), Positives = 132/247 (53%)
Query: 25 PGAILCFLPGWQDII--------QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPP--- 73
PG IL FL G ++I +VS + + + V +S L +Q IF P
Sbjct: 279 PGDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVKVVPLYSTLPPAMQQKIFDPAPVPL 338
Query: 74 ----PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVN 129
P RK+V+STN+AETS+TID + YV+D G K+ YN + + SL IS+AS +
Sbjct: 339 TEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASAH 398
Query: 130 QRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTER 186
QR+GRAGRT+PG+ F LY+E + + + PEI R L +LT K +G + L +
Sbjct: 399 QRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD- 457
Query: 187 CSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
F+ +PP P ++ A L +G D E NLT G+ ++ P P++SK L+ S
Sbjct: 458 ---FM----DPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSP 510
Query: 247 IYKGNCN 253
+ NC+
Sbjct: 511 EF--NCS 515
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 314 (115.6 bits), Expect = 4.0e-27, P = 4.0e-27
Identities = 95/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQV-SRVLSAIPGL-------LVT 54
R+YL T H C G +L FL G ++I + R+ I L +
Sbjct: 303 RDYLEAAIRTVI-QIHM-CEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKII 360
Query: 55 MAHSKLDTEVQGAIFGHPPP----GM--RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L + Q IF PPP G RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 361 PLYSTLPPQQQQRIFEPPPPRKPNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 420
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKP 167
YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E Y+ M + + PEI R
Sbjct: 421 YNPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSN 480
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + + + +LT L
Sbjct: 481 LGSVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALNDDGDLTEL 532
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G +A P P+L+K ++ S + NC+
Sbjct: 533 GSMMAEFPLDPQLAKMVIASCDF--NCS 558
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 313 (115.2 bits), Expect = 4.7e-27, P = 4.7e-27
Identities = 89/238 (37%), Positives = 122/238 (51%)
Query: 25 PGAILCFLPGWQDIIQVSRVLS----------AIPGLLVTMAHSKLDTEVQGAIFGHPPP 74
PG IL FL G ++I R ++ A L V + L Q IF P P
Sbjct: 285 PGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVYPLYGSLPPNQQQRIF-EPTP 343
Query: 75 -----GM-RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASV 128
G RKVV+STN+AETS+TID + YVVD G K+ YN + + SL IS+AS
Sbjct: 344 EDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASA 403
Query: 129 NQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERC 187
QRAGRAGRT+PG+ F LY+E+ +R+ + E + PEI R L +L K +
Sbjct: 404 QQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNLSSTVLELKK----LGIDDL 459
Query: 188 SSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F +PP P ++ A EL + D +LTPLG++ + P P L+ L+ S
Sbjct: 460 VHF--DYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEFPLDPNLAVMLIRS 515
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 312 (114.9 bits), Expect = 4.8e-27, P = 4.8e-27
Identities = 86/230 (37%), Positives = 119/230 (51%)
Query: 26 GAILCFLPGWQDII--------QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G +I + + + S GLL S L TE Q IF P R
Sbjct: 247 GDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMYIFEEAPANTR 306
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+ STN+AE S+TI + YVVD+G K YN K + +L IS+A+ QRAGRAGR
Sbjct: 307 KVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAAAAQRAGRAGR 366
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
TKPG+ F LY+E+ Y +++ ++PE+ R L +L K + F P
Sbjct: 367 TKPGKCFRLYTEESYTSLSDTNIPEVQRSNLAPFILQLKA----LGIDNVLHF--DFLTP 420
Query: 198 PDPASITSAATELKL-MGVFDQEENLT-PLGKRIAAMPCHPKLSKALVES 245
P PA + + A EL +G D LT PLG R+A + P ++K L+ +
Sbjct: 421 P-PAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSA 469
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 312 (114.9 bits), Expect = 5.9e-27, P = 5.9e-27
Identities = 96/268 (35%), Positives = 139/268 (51%)
Query: 3 RNYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQ----VSRVL----SAIPGLLVT 54
R+YL T H C G IL FL G ++I + + R + S I L
Sbjct: 262 RDYLEAAIRTVI-QIHM-CEEIEGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCI 319
Query: 55 MAHSKLDTEVQGAIFGH-PPPGM-----RKVVLSTNVAETSITIDDVAYVVDTGCHKETR 108
+S L +Q IF PPP RKVV+STN+AETS+TID V +V+D G K+
Sbjct: 320 PLYSTLPPNLQQRIFEPAPPPNANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKV 379
Query: 109 YNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKP 167
YN + + SL IS+AS QR+GRAGRT+PG+ F LY+E ++ M + + PEI R
Sbjct: 380 YNPRIRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSN 439
Query: 168 LEQILLTCK-VG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++L K +G + L + F+ +PP P ++ A L + D + NLT L
Sbjct: 440 LGTVVLQLKKLGIDDLVHFD----FM----DPPAPETLMRALELLNYLAALDDDGNLTDL 491
Query: 226 GKRIAAMPCHPKLSKALVESVIYKGNCN 253
G ++ P P+L+K L+ S + NC+
Sbjct: 492 GAVMSEFPLDPQLAKMLIASCQH--NCS 517
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 315 (115.9 bits), Expect = 6.6e-27, P = 6.6e-27
Identities = 79/227 (34%), Positives = 115/227 (50%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPG----LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVL 81
G +L F+ G +I V + LV HS Q +F + P GMRK ++
Sbjct: 373 GDVLIFVSGVNEIESVVEAVHEYATEQTHWLVLPLHSGQAIADQSKVFDYAPEGMRKCIV 432
Query: 82 STNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPG 141
STN+AETS+T+D V +VVD+G KE +++ L W+S++S +QR GRAGRT PG
Sbjct: 433 STNIAETSLTVDGVRFVVDSGKVKEMNFDATCKGQRLKEFWVSKSSADQRKGRAGRTGPG 492
Query: 142 ESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPA 201
F LY+ ++Y Y PEI+R PL+ +LL V L R F+ E P+
Sbjct: 493 VCFRLYTAEQYNAFEAYPTPEIYRVPLDTMLLQM-VSMGLPDV-RAFPFI----EAPETE 546
Query: 202 SITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
I LK EE +TPLG+ +A +P + K L+ ++
Sbjct: 547 RIEQTILALKQHCALSVEEKITPLGRSLANLPVELSIGKMLLMGSVF 593
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 313 (115.2 bits), Expect = 6.8e-27, P = 6.8e-27
Identities = 88/264 (33%), Positives = 132/264 (50%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDI----IQVSRVLSAIPG----LLVTM 55
NY++ TT F H S PG IL FL G ++I ++ ++S + +++T
Sbjct: 416 NYIHAAITTIF-QIH-TTQSLPGDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITP 473
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L E Q IF P RKVVL+TN+AETS+TID + YV+D G KE Y +
Sbjct: 474 IYANLPQEQQLKIFQPTPENCRKVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGM 533
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYS-LPEIFRKPLEQILLT 174
L SRASV+QRAGRAGR PG+ F ++++ Y E PEI R L +L
Sbjct: 534 TQLLTVPCSRASVDQRAGRAGRVGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLL 593
Query: 175 CKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPC 234
SL T+ L P P ++ + L ++G + + +T LGK + PC
Sbjct: 594 LL---SLGVTDLIKFPLMDKPSIP---TLRKSLENLYILGALNSKGTITRLGKMMCEFPC 647
Query: 235 HPKLSKALVESVIYKGNCNCYGLI 258
P+ +K L + ++ C G++
Sbjct: 648 EPEFAKVLYTAATHE---QCQGVL 668
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 311 (114.5 bits), Expect = 7.4e-27, P = 7.4e-27
Identities = 90/248 (36%), Positives = 133/248 (53%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPGLL--------VTMAHSKLDTEVQGAIFG---HP- 72
PG IL FL G ++I R ++ G L V +S L +Q IF P
Sbjct: 275 PGDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIKVVPLYSTLPPAMQQKIFDPAPEPV 334
Query: 73 ----PPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASV 128
PPG RK+V+STN+AETS+TID + YV+D G K+ YN + + SL IS+AS
Sbjct: 335 TEGGPPG-RKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 393
Query: 129 NQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTE 185
+QR+GRAGRT+PG+ F LY+E + + + PEI R L +LT K +G + L +
Sbjct: 394 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHFD 453
Query: 186 RCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
F+ +PP P ++ A L +G D + NLT G+ ++ P P+++K L+ S
Sbjct: 454 ----FM----DPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVS 505
Query: 246 VIYKGNCN 253
+ NC+
Sbjct: 506 PEF--NCS 511
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 311 (114.5 bits), Expect = 8.4e-27, P = 8.4e-27
Identities = 76/175 (43%), Positives = 105/175 (60%)
Query: 74 PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAG 133
PG RKVV+STN+AETS+TID + YVVD G K+ YN + + SL IS+AS QRAG
Sbjct: 368 PG-RKVVISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAG 426
Query: 134 RAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTERCSSF 190
RAGRT+PG+ F LY+E+ +++ + E S PEI R L +L K +G + L + F
Sbjct: 427 RAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFD----F 482
Query: 191 LSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
+ +PP P ++ A EL + D E NLTPLG+ + P P L+ L+ S
Sbjct: 483 M----DPPAPETMMRALEELNYLACLDDEGNLTPLGRLASQFPLDPMLAVMLIGS 533
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 313 (115.2 bits), Expect = 8.6e-27, P = 8.6e-27
Identities = 79/231 (34%), Positives = 130/231 (56%)
Query: 26 GAILCFLPGWQDI-IQVSRV---LSAI---PGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G IL F+ G +DI + V L A+ P L + +S++ ++Q IF PPG+RK
Sbjct: 512 GDILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPIYSQMPADLQAKIFDRAPPGVRK 571
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+++TN+AETS+T+D + YVVD G K YN K + +L IS+A+ +QR+GRAGRT
Sbjct: 572 CIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMDTLQITPISQANASQRSGRAGRT 631
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG++F L++E ++ + ++PEI R L +L K SL + F +P
Sbjct: 632 GPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLIK---SL-GVKDMLDF--DFMDP 685
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
P ++T++ +L +G D ++T LG+++ P P L+K ++ + Y
Sbjct: 686 PPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPLAKLIIMAEEY 736
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 311 (114.5 bits), Expect = 1.1e-26, P = 1.1e-26
Identities = 90/253 (35%), Positives = 126/253 (49%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTM 55
NY+ TT F H P PG IL FL G +I + +L I ++V
Sbjct: 423 NYIQAAITTIF-QIHMTQP-LPGDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCS 480
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
++ L E+Q IF P RK+VL+TN+AETSITID ++YV+D G K+ YN +
Sbjct: 481 IYANLPQELQQKIFQPTPSNTRKIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGM 540
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSE-DRYRRMAEYSLPEIFRKPLEQ-ILL 173
SL SRAS +QRAGRAGR PG+ F L+++ Y + PEI R L ILL
Sbjct: 541 ESLVVVPCSRASADQRAGRAGRVGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILL 600
Query: 174 TCKVG-ESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAM 232
+G L E F+ +PP +I A L +G + + LT GK+++
Sbjct: 601 LLSLGINDLLGFE----FM----DPPSKEAIIKALNLLYALGALNTQGKLTKTGKKMSEF 652
Query: 233 PCHPKLSKALVES 245
P P +K ++ S
Sbjct: 653 PLDPVFTKCILTS 665
>UNIPROTKB|G4NBP1 [details] [associations]
symbol:MGG_00523 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase PRP2" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CM001235 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 RefSeq:XP_003718533.1 EnsemblFungi:MGG_00523T0
GeneID:2674513 KEGG:mgr:MGG_00523 Uniprot:G4NBP1
Length = 803
Score = 309 (113.8 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 82/237 (34%), Positives = 123/237 (51%)
Query: 25 PGAILCFLPGWQDIIQVSRVL--------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPG- 75
PG IL FL G + I ++ R++ S +P + +L E Q F P G
Sbjct: 379 PGDILVFLYGQEPIEEIQRLIEEYAATLASDVPKIKALPLFGQLSMEAQHTAF-RPLKGR 437
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKVVL+TN+AETS+T+ V YV+DTG K +Y + L SL IS++S QRAGRA
Sbjct: 438 VRKVVLATNIAETSVTVPGVRYVIDTGKSKMKQYRASLGLESLLVDAISKSSAIQRAGRA 497
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR PG+ + LY+ED Y+ M + LPEI R + + L + +F L
Sbjct: 498 GREAPGKCYRLYTEDVYKEMRDADLPEILRNNVREAALIMMAR----GVDDLLTF--PLM 551
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+ P + + A +L ++G D E +T LGK++A +P L + L+ + +C
Sbjct: 552 DTPKISRMEKAMVQLNILGAIDDEGAITELGKKMARLPVAAPLGRVLLAAASPAYDC 608
>DICTYBASE|DDB_G0270110 [details] [associations]
symbol:dhx33 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0270110 GO:GO:0005524 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14781 RefSeq:XP_646548.1
EnsemblProtists:DDB0233404 GeneID:8617514 KEGG:ddi:DDB_G0270110
InParanoid:Q55CD3 OMA:EICINRE Uniprot:Q55CD3
Length = 730
Score = 308 (113.5 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 87/244 (35%), Positives = 132/244 (54%)
Query: 26 GAILCFLPGWQDIIQVSRVL-SAIP----G---LLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G +I + ++L IP G L+V S L E Q +F P G R
Sbjct: 297 GDILVFLTGRDEIENLEKLLLDRIPRLPVGSKDLIVCPIFSALPQEQQMKVFEKAPKGSR 356
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+L+TN+AETS+TI+ + YVVD+G K +N K + SL+ IS+AS QR GRAGR
Sbjct: 357 KVILATNIAETSLTINGIRYVVDSGAVKSKIFNPKIGIDSLNIIPISKASAKQRTGRAGR 416
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTERCSSFLSQLP 195
G+ + LY+++ + ++ S+PEI R + ++L K +G + S + FL
Sbjct: 417 EFEGKCYRLYTQETFEKLDTSSIPEIKRSNIANVILQLKTIGINDILSFD----FL---- 468
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCY 255
E P AS+ + L + +LT LGK++A P P SK L++S+ ++ C+
Sbjct: 469 ESPPVASVIKSLELLFCLDAISDNGSLTELGKKMALFPLDPMYSKTLIKSIEFE--CSEE 526
Query: 256 GLIV 259
LI+
Sbjct: 527 VLII 530
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 308 (113.5 bits), Expect = 1.8e-26, P = 1.8e-26
Identities = 82/214 (38%), Positives = 115/214 (53%)
Query: 40 QVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGH-PPP----GM--RKVVLSTNVAETSITI 92
++ R A P L V + L +Q IF PPP G RKV++STN+AETS+TI
Sbjct: 335 EMIREADAGP-LKVYTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTI 393
Query: 93 DDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRY 152
D + YVVD G K+ YN + + SL IS+AS QRAGRAGRT+PG+ F LY+E +
Sbjct: 394 DGIVYVVDPGFSKQKIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAF 453
Query: 153 RR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELK 211
++ + + + PEI R L +L K + F L +PP P ++ A EL
Sbjct: 454 KKELIDQTYPEILRSNLSSTVLELKK----LGIDDLVHF--DLMDPPAPETLMRALEELN 507
Query: 212 LMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
+ D + NLTPLG+ + P P L+ L+ S
Sbjct: 508 YLACLDDDGNLTPLGRLASEFPLDPALAVMLISS 541
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 307 (113.1 bits), Expect = 1.9e-26, P = 1.9e-26
Identities = 89/249 (35%), Positives = 122/249 (48%)
Query: 4 NYLYCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRV----LSAIPG----LLVTM 55
+Y+ T F HF PG IL FL G +I V R+ L IP LL
Sbjct: 273 DYVDATLVTIF-QIHFE--EKPGDILVFLTGQDEIESVERLVQERLQNIPEDKRKLLPLA 329
Query: 56 AHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDL 115
S L +E Q +F P G RKV+L+TN+AETSITI + YV+D G K Y+ +
Sbjct: 330 IFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGM 389
Query: 116 VSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTC 175
SLD S+A QR+GRAGR PG+SF LY E + ++ + + PEI R L I+L
Sbjct: 390 ESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTKPEIKRCNLSNIILQL 449
Query: 176 KVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENL-TPLGKRIAAMPC 234
K + F + P +I A EL +G + L P+G +++ +P
Sbjct: 450 KA----LGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPL 503
Query: 235 HPKLSKALV 243
P SKAL+
Sbjct: 504 EPVYSKALI 512
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 311 (114.5 bits), Expect = 2.0e-26, P = 2.0e-26
Identities = 81/242 (33%), Positives = 132/242 (54%)
Query: 26 GAILCFLPGWQDIIQVSRVLSA-------IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
G +L F+PG +DI VL P L + +S+L +++Q IF G+RK
Sbjct: 743 GDMLIFMPGQEDIEVTCEVLEERLAEIDNAPALSILPIYSQLPSDLQAKIFQKSSDGLRK 802
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
V++TN+AETS+T+D + YV+D+G K YN + + +L IS+A+ NQR+GRAGRT
Sbjct: 803 CVVATNIAETSLTVDGIIYVIDSGYCKLKVYNPRIGMDALQIYPISQANANQRSGRAGRT 862
Query: 139 KPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
PG+++ LY++ +Y+ + ++PEI R L +L K SL + F +P
Sbjct: 863 GPGQAYRLYTQRQYKDELLALTVPEIQRTNLANTVLLLK---SLGVVDLLQ-F--HFMDP 916
Query: 198 PDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGL 257
P +I ++ +L ++G D LT LG+++A P P + L+ V + C+ L
Sbjct: 917 PPQDNILNSLYQLWILGALDHTGALTTLGRQMAEFPLDPPQCQMLI--VACRMGCSAEVL 974
Query: 258 IV 259
I+
Sbjct: 975 II 976
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 311 (114.5 bits), Expect = 2.5e-26, P = 2.5e-26
Identities = 80/236 (33%), Positives = 121/236 (51%)
Query: 27 AILCFLPGWQDIIQV-SRVLSAIPGLLVTMA--------HSKLDTEVQGAIFGHPPPGMR 77
+IL F+PG DI+++ SR+ I + HS L + Q +F P G
Sbjct: 899 SILVFVPGLSDILELCSRLGKPISTFTEAICQRIWCVPLHSSLSPKDQQKVFEKAPNGRV 958
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVV++TN+AETSITI+DV VVD G + +NS + +W S+AS QRAGRAGR
Sbjct: 959 KVVIATNIAETSITIEDVEIVVDCGRVNQMTFNSITGNSVMSEEWTSKASCRQRAGRAGR 1018
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
T G F ++++ ++ + PEI R L+Q+ L K+ FL++ EP
Sbjct: 1019 TSSGLCFKVFTKSMESQLQDQDTPEILRTSLQQLCLHVKLFLKNNKNTTIQDFLNRAIEP 1078
Query: 198 PDPASITSAATELKLMGVF----DQEENLTPLGKRIAAMPCHPKLSKALVESVIYK 249
P I S+ EL + Q++ LTPLG +A++P + K L+ I++
Sbjct: 1079 PSSEQIQSSINELISIDALKINQQQQQELTPLGYHLASLPVDVYIGKMLLFGCIFR 1134
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 305 (112.4 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 90/243 (37%), Positives = 125/243 (51%)
Query: 26 GAILCFLPGWQDIIQ----VSRVLSAI---PGLLVTMA-HSKLDTEVQGAIFGHPPPGM- 76
G IL FL G ++I + + R + A+ G L + +S L Q IF PP
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRP 353
Query: 77 -----RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQR 131
RK V+STN+AETS+TID V +V+D G K+ YN + + SL IS+AS QR
Sbjct: 354 NGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQR 413
Query: 132 AGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSF 190
AGRAGRTKPG+ F LY+E Y M + + PEI R L ++L K TE F
Sbjct: 414 AGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKK----LGTEDLVHF 469
Query: 191 LSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKG 250
+PP P ++ A L + + + LT LG +A P P+L+K L+ S +
Sbjct: 470 --DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITST--EL 525
Query: 251 NCN 253
NC+
Sbjct: 526 NCS 528
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 305 (112.4 bits), Expect = 3.4e-26, P = 3.4e-26
Identities = 90/243 (37%), Positives = 125/243 (51%)
Query: 26 GAILCFLPGWQDIIQ----VSRVLSAI---PGLLVTMA-HSKLDTEVQGAIFGHPPPGM- 76
G IL FL G ++I + + R + A+ G L + +S L Q IF PP
Sbjct: 294 GDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIPLYSTLPPAAQQRIFEPAPPNRP 353
Query: 77 -----RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQR 131
RK V+STN+AETS+TID V +V+D G K+ YN + + SL IS+AS QR
Sbjct: 354 NGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVYNPRIRVESLLVCPISKASAMQR 413
Query: 132 AGRAGRTKPGESFHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSF 190
AGRAGRTKPG+ F LY+E Y M + + PEI R L ++L K TE F
Sbjct: 414 AGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNLGSVVLQLKK----LGTEDLVHF 469
Query: 191 LSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKG 250
+PP P ++ A L + + + LT LG +A P P+L+K L+ S +
Sbjct: 470 --DFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEFPLDPQLAKMLITST--EL 525
Query: 251 NCN 253
NC+
Sbjct: 526 NCS 528
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 308 (113.5 bits), Expect = 3.7e-26, P = 3.7e-26
Identities = 88/248 (35%), Positives = 132/248 (53%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
S++P L V +S L E Q +F PPPG R V++TNVAETS+TI + YVVD G K
Sbjct: 573 SSLP-LYVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 631
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S WIS+AS NQRAGRAGRT+PG + LYS + ++S PEI +
Sbjct: 632 KRFYDKITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEKFSAPEITK 691
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKL-MGVFDQ------ 218
+P+E ++L K + E+ +F P PP P +AA EL + +G +
Sbjct: 692 RPVEDLILQMKA----LNIEKVINF--PFPTPP-PTEALAAAEELLIALGALKEPPMTGR 744
Query: 219 --EEN-------LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSK--REGR 267
E+ ++PLG+ +A P P+ +K L S + +C Y + + + RE
Sbjct: 745 LKEQQAAKLSCPISPLGRVMATFPVAPRYAKMLALS--RQHDCLPYTITIVSAMTVRELF 802
Query: 268 QDRRKPAA 275
++ +PAA
Sbjct: 803 EEFDRPAA 810
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 303 (111.7 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 83/228 (36%), Positives = 116/228 (50%)
Query: 25 PGAILCFLPGWQDIIQVSRVL------SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
PG IL FL G +++++ +L S L V + + + Q ++F PP G RK
Sbjct: 261 PGDILAFLTGQEEVLEALDLLREYIASSEQENLKVLPMYGSMSSTDQLSVFFTPPKGTRK 320
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
VVL+TN+AETSITI + YV+D G K YN K SL +S+AS QRAGRAGR
Sbjct: 321 VVLATNIAETSITIPGIVYVIDCGYVKVKWYNPKTCSDSLVIVPVSKASAIQRAGRAGRM 380
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
+PG+ + LY++ Y +A PE+ R L +L K F P PP
Sbjct: 381 RPGKVYRLYTKSDYEALAPRQPPEMRRSELSGAILQLKA----LGIGNILRF--DFPSPP 434
Query: 199 DPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVES 245
++ SA L + D++ NLT P+G +A +P LSK L S
Sbjct: 435 PAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPFSAMLSKMLYVS 482
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 308 (113.5 bits), Expect = 4.6e-26, P = 4.6e-26
Identities = 83/237 (35%), Positives = 123/237 (51%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSAIPG--LLVTMAHSKLDTEVQGAIFGHPPPGMRKVV 80
S G+IL FLPG +I + R + + G V H+ L+T Q F RK++
Sbjct: 811 SSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQRRCF--KTYTKRKII 868
Query: 81 LSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKP 140
+TN+AETSITIDDV V+D+G K+ Y+ + DLV+ W SRA+ QR GRAGR K
Sbjct: 869 CATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGRVKK 928
Query: 141 GESFHLYSED-RYRRMAEYSLPEIFRKPLEQILLTC--------KVGESLYSTERCSSFL 191
G + LY+ + M + PE+ R L Q+ L G S+ + F+
Sbjct: 929 GICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSV-NQGSIKKFM 987
Query: 192 SQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+ L +PP+ A++ A +L +G E+LT LG+ + ++P KL K LV I+
Sbjct: 988 NSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIF 1044
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 301 (111.0 bits), Expect = 8.9e-26, P = 8.9e-26
Identities = 85/229 (37%), Positives = 121/229 (52%)
Query: 26 GAILCFLPGWQDI------IQVSRVLSAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKV 79
G IL FL G ++I IQ +P + +S L Q IF RK
Sbjct: 287 GDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDTCKE--RKC 344
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
++STN+AETS+TID + +VVD G K+ YN + + SL IS+AS NQRAGRAGRT+
Sbjct: 345 IVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQRAGRAGRTR 404
Query: 140 PGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTC-KVGE-SLYSTERCSSFLSQLPE 196
PG+ F LY+E ++ M + + PEI R L ++L K+G L + F+ +
Sbjct: 405 PGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQLLKLGVVDLVHFD----FM----D 456
Query: 197 PPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
PP P ++ A L +G D E LT +G ++ P P+LSK L+ S
Sbjct: 457 PPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVS 505
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 284 (105.0 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 71/205 (34%), Positives = 104/205 (50%)
Query: 48 IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKET 107
I + + +S L + Q IF PP RKV+LSTN+AETS+TI ++ YV+D+G K
Sbjct: 397 IYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIK 456
Query: 108 RYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKP 167
++ L IS+ S QR+GRAGR PG+ + +Y+++ Y M + +PEIFR
Sbjct: 457 YFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSD 516
Query: 168 LEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGK 227
L QI L K + F PE P +A L + D NLT LGK
Sbjct: 517 LTQIYLELKA----MNINNPLEF--NFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGK 570
Query: 228 RIAAMPCHPKLSKALVESVIYKGNC 252
++ P +P + L+ S+ + NC
Sbjct: 571 KLCLFPLNPIYANILLCSIEF--NC 593
Score = 44 (20.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 26 GAILCFLPGWQDIIQVSRVL 45
G IL FLPG ++I V+ +L
Sbjct: 317 GDILVFLPGQEEIEMVNIML 336
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 284 (105.0 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 71/205 (34%), Positives = 104/205 (50%)
Query: 48 IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKET 107
I + + +S L + Q IF PP RKV+LSTN+AETS+TI ++ YV+D+G K
Sbjct: 397 IYNMKILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIK 456
Query: 108 RYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKP 167
++ L IS+ S QR+GRAGR PG+ + +Y+++ Y M + +PEIFR
Sbjct: 457 YFDVNRGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYENMNPFLIPEIFRSD 516
Query: 168 LEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGK 227
L QI L K + F PE P +A L + D NLT LGK
Sbjct: 517 LTQIYLELKA----MNINNPLEF--NFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGK 570
Query: 228 RIAAMPCHPKLSKALVESVIYKGNC 252
++ P +P + L+ S+ + NC
Sbjct: 571 KLCLFPLNPIYANILLCSIEF--NC 593
Score = 44 (20.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 26 GAILCFLPGWQDIIQVSRVL 45
G IL FLPG ++I V+ +L
Sbjct: 317 GDILVFLPGQEEIEMVNIML 336
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 300 (110.7 bits), Expect = 1.2e-25, P = 1.2e-25
Identities = 84/229 (36%), Positives = 117/229 (51%)
Query: 25 PGAILCFLPGWQDIIQVSRVLSAIPG-------LLVTMAHSKLDTEVQGAIFGHPPPGMR 77
PG IL FL G ++ V L + G L V + L Q F P G R
Sbjct: 296 PGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQMKAFDSTPHGTR 355
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVV++TN+AE SITI + YV+DTG K ++ + + +L +S+AS QRAGRAGR
Sbjct: 356 KVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKASAEQRAGRAGR 415
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
+PG+ + LY E + R AE ++PEI R + +L K + + R +LS P P
Sbjct: 416 IRPGKCYRLYPESEFERFAEGTVPEIQRCQMASTILQLKA-LGVQNVHRFH-YLS--P-P 470
Query: 198 PDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVES 245
P A I L +G D+ LT PLG ++A P P SK L++S
Sbjct: 471 PSWAMINGLEL-LYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKS 518
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 298 (110.0 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 90/245 (36%), Positives = 129/245 (52%)
Query: 26 GAILCFLPGWQDIIQV-------SRVLSAI---PGLLVTMAHSKLDTEVQGAIFGHPPPG 75
G +L FL G +++ +V +R LS L V ++ L Q +F P
Sbjct: 265 GDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYNEQMRVFERMAPT 324
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKVV++TN+AETSITI+ V +V+D K YN + + SL IS+AS QRAGRA
Sbjct: 325 VRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPISKASACQRAGRA 384
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR + G+ F LY+E+ + ++ E ++PE+ R L ++L K + + R S FLS
Sbjct: 385 GRNRAGKCFRLYTEEDFEKLPESTVPEMQRSNLAPVILQLKA-LGIDNVLRFS-FLS--- 439
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G DQ LT P+G R+A P P +K L+ES GN C
Sbjct: 440 -PPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLES----GNFGC 494
Query: 255 YGLIV 259
IV
Sbjct: 495 SKEIV 499
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 298 (110.0 bits), Expect = 1.9e-25, P = 1.9e-25
Identities = 71/200 (35%), Positives = 115/200 (57%)
Query: 47 AIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKE 106
++ GLL+ + + T+ Q IF P G+RK V++TN+A TS+TID + Y+VD+G K+
Sbjct: 274 SVDGLLILSLYGSMPTDQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQ 333
Query: 107 TRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFR 165
+NS+ L L+ IS++ QRAGRAGRT G+ F +YS+D + M EY++PEI R
Sbjct: 334 LNHNSRVGLDILEVVPISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQR 393
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPL 225
L ++LT K ++ R +L + P+ I +A +L D+ +T L
Sbjct: 394 TSLTSVILTLKC-LGVHDVIRFP-YL----DCPEERFILTALKQLYQYDAIDRRGEVTKL 447
Query: 226 GKRIAAMPCHPKLSKALVES 245
G+ + P P L++AL+++
Sbjct: 448 GRLMVEFPLPPNLTRALLKA 467
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 297 (109.6 bits), Expect = 2.2e-25, P = 2.2e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 231 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 290
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 291 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 350
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 351 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 404
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 405 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 436
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 300 (110.7 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 78/198 (39%), Positives = 112/198 (56%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
+S L ++Q IF RK++++TN+AETS+TI + YV+D G K YN K L
Sbjct: 612 YSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKLKVYNPKIGLD 671
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTC 175
SL IS+A+ +QR+GRAGRT PG ++ LY+ED ++ M ++PEI R L LL
Sbjct: 672 SLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQRTNLSNTLLLL 731
Query: 176 KVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCH 235
K SL T+ S F + +PP + S+ EL +G D LTPLG ++A P
Sbjct: 732 K---SLDVTDELSKF-PFIDKPP-LQTFLSSLYELWFIGAIDTSGQLTPLGLQMAKFPLQ 786
Query: 236 PKLSKALVESVIYKGNCN 253
P LSK L+ +V + C+
Sbjct: 787 PSLSKILLIAV--RNGCS 802
>ZFIN|ZDB-GENE-030131-4505 [details] [associations]
symbol:dhx37 "DEAH (Asp-Glu-Ala-His) box
polypeptide 37" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4505 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780
CTD:57647 HOVERGEN:HBG051356 OMA:AKLQPRT EMBL:CABZ01014508
EMBL:CABZ01038687 EMBL:CABZ01038688 EMBL:CABZ01038689
EMBL:CABZ01038690 EMBL:CABZ01038691 EMBL:CABZ01038692
EMBL:CABZ01038693 EMBL:CABZ01038694 EMBL:CABZ01038695
EMBL:CABZ01038696 EMBL:CU469504 EMBL:FP085395 IPI:IPI00488738
RefSeq:NP_001076473.2 UniGene:Dr.79711 Ensembl:ENSDART00000090731
Ensembl:ENSDART00000127153 GeneID:100009635 KEGG:dre:100009635
NextBio:20787816 Uniprot:B8JLP0
Length = 1152
Score = 283 (104.7 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 84/245 (34%), Positives = 127/245 (51%)
Query: 47 AIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKE 106
+IP L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K+
Sbjct: 577 SIP-LYVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSLTIPGIKYVVDCGRVKK 635
Query: 107 TRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRK 166
Y+ + S WIS+AS NQRAGRAGRT+PG + LYS + + +S EI R+
Sbjct: 636 RFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDFSLFSEAEITRR 695
Query: 167 PLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN----- 221
P+E ++L K L + E+ +F P PP ++ +A L +G ++
Sbjct: 696 PVEDLVLQMK---DL-NIEKVVNF--PFPTPPSSEALIAAEELLISLGALEKPARHGRLS 749
Query: 222 ----------LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSK--REGRQD 269
++PLG+ +AA P P+ +K L ++ + C Y + + + RE +D
Sbjct: 750 EMEKARLSCPISPLGRAMAAFPVAPRYAKML--ALGRQQGCMQYIITIVSAMTVREIFED 807
Query: 270 RRKPA 274
+PA
Sbjct: 808 YDRPA 812
Score = 45 (20.9 bits), Expect = 2.5e-25, Sum P(2) = 2.5e-25
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 25 PGAILCFLPGWQDIIQVSRVL-SAIP 49
PG IL FL G ++ V R L A P
Sbjct: 469 PGGILVFLTGQAEVHSVCRRLRKAFP 494
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 299 (110.3 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 76/226 (33%), Positives = 115/226 (50%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIP----GLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVL 81
G L FL G +I V+ L G ++ M HS L E Q +F P G+RK +L
Sbjct: 292 GDALIFLNGVAEISMVAEHLKNYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRKCIL 351
Query: 82 STNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPG 141
STNVAETS+TID + +V+D+G ++ L W+S+AS NQR GRAGRT PG
Sbjct: 352 STNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRTGPG 411
Query: 142 ESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPA 201
+ LYS++++ +M ++++ EI R L+++ L + +L R F+ E P
Sbjct: 412 ICYRLYSQEQFEKMDDFTVSEINRVSLQEMALKM-ISLNLGLDPRTFPFI----EKPSED 466
Query: 202 SITSAATELKLMGVFDQEEN----LTPLGKRIAAMPCHPKLSKALV 243
+ LK V + LT LG ++ +P ++K LV
Sbjct: 467 VLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLV 512
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 297 (109.6 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 513
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 297 (109.6 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 513
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 297 (109.6 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 513
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 297 (109.6 bits), Expect = 2.8e-25, P = 2.8e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 513
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 300 (110.7 bits), Expect = 3.2e-25, P = 3.2e-25
Identities = 82/229 (35%), Positives = 116/229 (50%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI-PG-LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G IL FL G ++I + L P V +S+L Q IF P G R++VL+T
Sbjct: 291 GDILIFLSGEREIRDTAESLRKHHPADCEVLPLYSRLTVSEQEKIF--KPHGRRRIVLAT 348
Query: 84 NVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGES 143
NVAETS+T+ + V+D G + +RY+ + L L + ISRAS NQRAGR GR PG
Sbjct: 349 NVAETSLTVPGIRGVIDAGYARISRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVC 408
Query: 144 FHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASI 203
LYSE + E++ PEI R L ++L K R F+ EPPD +
Sbjct: 409 IRLYSEQDFLNRPEFTDPEILRTNLAAVILQMKALN--LGDIRVFPFV----EPPDERLV 462
Query: 204 TSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
L+ + D + LT LG+R+A +P P+L + L+ + NC
Sbjct: 463 RDGLRTLQEINALDAQGRLTELGRRLARLPVDPRLGRILLAGA--EENC 509
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 297 (109.6 bits), Expect = 3.4e-25, P = 3.4e-25
Identities = 73/216 (33%), Positives = 122/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 386 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 445
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 446 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIK 505
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 506 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 559
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++++ + +C L++P
Sbjct: 560 LGLSMVEFPLPPHLTCAVIKAA----SLDCEDLLLP 591
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 295 (108.9 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 73/216 (33%), Positives = 121/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++ + + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIRAA----SLDCEDLLLP 513
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 294 (108.6 bits), Expect = 5.7e-25, P = 5.7e-25
Identities = 73/178 (41%), Positives = 104/178 (58%)
Query: 74 PGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAG 133
PG RKV++STN+AETS+TID + YVVD G K+ YN + + SL IS+AS QRAG
Sbjct: 371 PG-RKVIISTNIAETSLTIDGIVYVVDPGFSKQKVYNPRVRVESLLVSPISKASAQQRAG 429
Query: 134 RAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTERCSSF 190
RAGRT+PG+ F LY+E+ +++ + E S PEI R L +L K +G + L + F
Sbjct: 430 RAGRTRPGKCFRLYTEEAFKKELIEQSYPEILRSNLSSTVLELKKLGIDDLVHFD----F 485
Query: 191 LSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+ +PP P ++ A EL + E +LT LG+ + P P L+ L+ S Y
Sbjct: 486 M----DPPAPETMMRALEELNYLQCLSDEGDLTALGRLASQFPLDPMLAVMLIGSPAY 539
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 293 (108.2 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 85/240 (35%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L L V ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGRA
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRA 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+ED + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 395 GRSRSGKCYRLYTEDAFDQLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 293 (108.2 bits), Expect = 6.4e-25, P = 6.4e-25
Identities = 88/260 (33%), Positives = 134/260 (51%)
Query: 4 NYL-YCWQTTFFYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL---------SAIPGLLV 53
+YL C +T F T P PG IL FL G QD I+ L S +P +
Sbjct: 286 DYLDACLRTIFQLHTKLP----PGDILVFLTG-QDEIEALEALIKSYSKQLPSNLPQIQA 340
Query: 54 TMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKD 113
+ L E Q +F RKVVLSTN+AETS+TI + YV+DTG K ++NSK
Sbjct: 341 CPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKL 400
Query: 114 DLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILL 173
L SL Q IS+++ QR+GRAGR G+ + +Y+E + ++ + ++PEI R L Q +L
Sbjct: 401 GLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYTEADFDKLPKETIPEIKRIDLSQAVL 460
Query: 174 TCKV-GESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAM 232
T K G++ +F +PP + A L +G D ++ LG +++ +
Sbjct: 461 TLKARGQN-----DVINF--HYMDPPSKEGLLRALEHLYSIGALDDNGHINDLGYQMSLI 513
Query: 233 PCHPKLSKALVESVIYKGNC 252
P P L++A++ + + NC
Sbjct: 514 PLLPSLARAVLAA--REHNC 531
>GENEDB_PFALCIPARUM|PFL1525c [details] [associations]
symbol:PFL1525c "pre-mRNA splicing factor RNA
helicase, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0008380
"RNA splicing" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0005681
GO:GO:0003676 GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 279 (103.3 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 68/177 (38%), Positives = 101/177 (57%)
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RK++LSTN+ ETSITID++ YV+D+G K+ YN + SL S+ASVNQR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 137 RTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLP 195
R + G+ F L+++ + +++ S+PEI R + ++L K SL + + FL
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLK---SLGMDDIINFDFL---- 915
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+PP P I L +G + E NLT G+++A P K SK ++ S K NC
Sbjct: 916 DPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMIL-SAAEKYNC 971
Score = 45 (20.9 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 26 GAILCFLPGWQDIIQVSRVLS-----AIP---GLLVTMAHSKLDTEVQGAIF 69
G IL FLPG +I V + L P L++ +S L E Q IF
Sbjct: 647 GDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>UNIPROTKB|Q8I5A4 [details] [associations]
symbol:PFL1525c "Pre-mRNA splicing factor RNA helicase,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008380 GO:GO:0005681 GO:GO:0003676
GO:GO:0051726 EMBL:AE014188 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 KO:K01509 RefSeq:XP_001350711.1
ProteinModelPortal:Q8I5A4 IntAct:Q8I5A4 MINT:MINT-1581184
PRIDE:Q8I5A4 EnsemblProtists:PFL1525c:mRNA GeneID:811357
KEGG:pfa:PFL1525c EuPathDB:PlasmoDB:PF3D7_1231600
ProtClustDB:CLSZ2514931 Uniprot:Q8I5A4
Length = 1168
Score = 279 (103.3 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 68/177 (38%), Positives = 101/177 (57%)
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RK++LSTN+ ETSITID++ YV+D+G K+ YN + SL S+ASVNQR GRAG
Sbjct: 803 RKIILSTNICETSITIDNIVYVIDSGLCKQKIYNPNSGIESLVTLPCSKASVNQRTGRAG 862
Query: 137 RTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCS-SFLSQLP 195
R + G+ F L+++ + +++ S+PEI R + ++L K SL + + FL
Sbjct: 863 RKRDGKCFRLFTKKSFIDLSDNSIPEIQRCEISSMILLLK---SLGMDDIINFDFL---- 915
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESVIYKGNC 252
+PP P I L +G + E NLT G+++A P K SK ++ S K NC
Sbjct: 916 DPPSPIVIIKGLELLYSLGALNDEGNLTRTGRKMAEFPTDVKSSKMIL-SAAEKYNC 971
Score = 45 (20.9 bits), Expect = 7.0e-25, Sum P(2) = 7.0e-25
Identities = 18/52 (34%), Positives = 23/52 (44%)
Query: 26 GAILCFLPGWQDIIQVSRVLS-----AIP---GLLVTMAHSKLDTEVQGAIF 69
G IL FLPG +I V + L P L++ +S L E Q IF
Sbjct: 647 GDILVFLPGQYEIELVQQELENKLNELAPKYRNLVILPIYSSLPVEYQARIF 698
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 291 (107.5 bits), Expect = 8.9e-25, P = 8.9e-25
Identities = 83/230 (36%), Positives = 121/230 (52%)
Query: 26 GAILCFLPGWQDI---IQV--SRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPGMR 77
G IL FL G ++I IQ+ R + P LL ++ L T+ Q +F P R
Sbjct: 247 GDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVFEPAPENTR 306
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KVV+STN+AE S+TI+ + YVVD G K Y+ + +L IS+A+ QRAGRAGR
Sbjct: 307 KVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAVQRAGRAGR 366
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEP 197
TKPG+ F LY++ Y ++ + ++PEI R L +++ K + F L P
Sbjct: 367 TKPGKCFRLYTQHAYEQLPDATIPEIQRSNLAPVIMQLKA----LGIDNIVRF-DFLTSP 421
Query: 198 PDPASITSAATELKL-MGVFDQEENLT-PLGKRIAAMPCHPKLSKALVES 245
P A + A EL +G D LT PLG R+A + P ++K L+ +
Sbjct: 422 P--ADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSA 469
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 291 (107.5 bits), Expect = 9.2e-25, P = 9.2e-25
Identities = 84/240 (35%), Positives = 127/240 (52%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAI---PGLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L+ L V ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR + G+ + LY+E+ + ++ + ++PE+ R L ++L K + S R F+S
Sbjct: 395 GRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKA-LGIDSVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 291 (107.5 bits), Expect = 9.8e-25, P = 9.8e-25
Identities = 83/240 (34%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L L V ++ L + Q +F
Sbjct: 267 GDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 326
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGRA
Sbjct: 327 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRA 386
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 387 GRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 441
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG R+A P +P +K L+ES GN C
Sbjct: 442 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLES----GNFGC 496
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 291 (107.5 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 83/240 (34%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L L V ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALGRTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGRA
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTTIECLVVAPVSQASANQRAGRA 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 395 GRSRSGKCYRLYTEEAFDKLPQCTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG R+A P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEFPLNPMFAKMLLES----GNFGC 504
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 291 (107.5 bits), Expect = 9.9e-25, P = 9.9e-25
Identities = 84/240 (35%), Positives = 127/240 (52%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAI---PGLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L+ L V ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALARTGMKKHLRVLPMYAGLPSFEQMKVFERVSHS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFMKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR + G+ + LY+E+ + ++ + ++PE+ R L ++L K + S R F+S
Sbjct: 395 GRNRSGKCYRLYTEEAFEQLPQSTVPEMQRSNLAPVVLQLKA-LGIDSVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 291 (107.5 bits), Expect = 1.0e-24, P = 1.0e-24
Identities = 88/242 (36%), Positives = 127/242 (52%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAI---PGLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R LS L V ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI +AYV+D G K YN K + L +S+AS NQRAGRA
Sbjct: 335 VRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGRA 394
Query: 136 GRTKPGESFHLYS--EDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQ 193
GR + G+ + LY+ E+ + ++ + ++PE+ R L ++L K + + R FLS
Sbjct: 395 GRNRSGKCYRLYTATEEDFEKLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFP-FLS- 451
Query: 194 LPEPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNC 252
PP S+ A L +G D LT PLG RIA P +P +K L+ES GN
Sbjct: 452 ---PPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLES----GNF 504
Query: 253 NC 254
C
Sbjct: 505 GC 506
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 290 (107.1 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 72/216 (33%), Positives = 121/216 (56%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+ + GLL+ + + T+ Q IF PPPG+RK V+STN++ TS+TID + YVVD G K
Sbjct: 308 TTLDGLLILPCYGSMTTDQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVK 367
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIF 164
+ +N + L L+ IS++ QR+GRAGRT G+ F +YS++ + + M ++ +PEI
Sbjct: 368 QLNHNPRLGLDILEVVPISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIK 427
Query: 165 RKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTP 224
R L ++LT K +++ R +L +PP+ I A +L D+ ++T
Sbjct: 428 RTSLTSVVLTLKC-LAIHDVIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTR 481
Query: 225 LGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG + P P L+ A++ + + +C L++P
Sbjct: 482 LGLSMVEFPLPPHLTCAVIRAA----SLDCEDLLLP 513
>UNIPROTKB|P37024 [details] [associations]
symbol:hrpB "predicted ATP-dependent helicase"
species:83333 "Escherichia coli K-12" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 GO:GO:0008026
EMBL:D42122 PIR:D64738 RefSeq:NP_414690.4 RefSeq:YP_488451.1
ProteinModelPortal:P37024 SMR:P37024 DIP:DIP-9938N IntAct:P37024
MINT:MINT-1231977 PRIDE:P37024 EnsemblBacteria:EBESCT00000000663
EnsemblBacteria:EBESCT00000016535 GeneID:12932407 GeneID:944845
KEGG:ecj:Y75_p0145 KEGG:eco:b0148 PATRIC:32115403 EchoBASE:EB2233
EcoGene:EG12329 HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI
ProtClustDB:PRK11664 BioCyc:EcoCyc:EG12329-MONOMER
BioCyc:ECOL316407:JW0144-MONOMER Genevestigator:P37024
InterPro:IPR010225 InterPro:IPR013689 Pfam:PF08482
PIRSF:PIRSF005496 TIGRFAMs:TIGR01970 Uniprot:P37024
Length = 809
Score = 290 (107.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 78/222 (35%), Positives = 125/222 (56%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPG--LLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G++L FLPG +I +V L++ G +L+ + L Q P GMRKVVL+T
Sbjct: 213 GSLLLFLPGVGEIQRVQEQLASRIGSDVLLCPLYGALSLNDQRKAILPAPQGMRKVVLAT 272
Query: 84 NVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGES 143
N+AETS+TI+ + VVD + R++ + L L Q +S+AS+ QRAGRAGR +PG S
Sbjct: 273 NIAETSLTIEGIRLVVDCAQERVARFDPRTGLTRLITQRVSQASMTQRAGRAGRLEPGIS 332
Query: 144 FHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASI 203
HL ++++ R A S PEI + L +L+ E L + +S L +PP ++
Sbjct: 333 LHLIAKEQAERAAAQSEPEILQSDLSGLLM-----ELLQWGCSDPAQMSWLDQPP-VVNL 386
Query: 204 TSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
+A L+++G + E L+ G+++AA+ P+L+ LV +
Sbjct: 387 LAAKRLLQMLGALEGER-LSAQGQKMAALGNDPRLAAMLVSA 427
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 286 (105.7 bits), Expect = 3.1e-24, P = 3.1e-24
Identities = 82/240 (34%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G +L FL G +++ I+ +R L+ L V ++ L + Q +F
Sbjct: 244 GDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 303
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 304 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 363
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 364 GRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 418
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 419 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 473
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 286 (105.7 bits), Expect = 3.2e-24, P = 3.2e-24
Identities = 82/240 (34%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G +L FL G +++ I+ +R L+ L V ++ L + Q +F
Sbjct: 275 GDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 395 GRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 286 (105.7 bits), Expect = 3.4e-24, P = 3.4e-24
Identities = 82/240 (34%), Positives = 128/240 (53%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G +L FL G +++ I+ +R L+ L V ++ L + Q +F
Sbjct: 275 GDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSFEQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 395 GRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 288 (106.4 bits), Expect = 3.8e-24, P = 3.8e-24
Identities = 83/247 (33%), Positives = 126/247 (51%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+++P L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K
Sbjct: 371 ASLP-LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 429
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S W+S+AS +QRAGRAGRT+PG + LYS + ++ PEI R
Sbjct: 430 KRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITR 489
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQ------- 218
+P+E ++L K + E+ +F P PP ++ +A L +G
Sbjct: 490 RPVEDLILQMKA----LNVEKVINF--PFPTPPSVEALLAAEELLIALGALQPPQKAERV 543
Query: 219 ---EEN-----LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSK--REGRQ 268
+EN +T LG+ +A P P+ +K L S + C Y + + S RE +
Sbjct: 544 KQLQENRLSCPITALGRTMATFPVAPRYAKMLALS--RQHGCLPYAITIVASMTVRELFE 601
Query: 269 DRRKPAA 275
+ +PAA
Sbjct: 602 ELDRPAA 608
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 288 (106.4 bits), Expect = 5.1e-24, P = 5.1e-24
Identities = 83/247 (33%), Positives = 126/247 (51%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+++P L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K
Sbjct: 584 ASLP-LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 642
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S W+S+AS +QRAGRAGRT+PG + LYS + ++ PEI R
Sbjct: 643 KRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITR 702
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQ------- 218
+P+E ++L K + E+ +F P PP ++ +A L +G
Sbjct: 703 RPVEDLILQMKA----LNVEKVINF--PFPTPPSVEALLAAEELLIALGALQPPQKAERV 756
Query: 219 ---EEN-----LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVPKSK--REGRQ 268
+EN +T LG+ +A P P+ +K L S + C Y + + S RE +
Sbjct: 757 KQLQENRLSCPITALGRTMATFPVAPRYAKMLALS--RQHGCLPYAITIVASMTVRELFE 814
Query: 269 DRRKPAA 275
+ +PAA
Sbjct: 815 ELDRPAA 821
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 284 (105.0 bits), Expect = 5.7e-24, P = 5.7e-24
Identities = 82/240 (34%), Positives = 127/240 (52%)
Query: 26 GAILCFLPGWQDI-------IQVSRVLSAIP---GLLVTMAHSKLDTEVQGAIFGHPPPG 75
G IL FL G +++ I+ +R L L + ++ L + Q +F
Sbjct: 275 GDILAFLTGQEEVETVVSMLIEQARALGQTGMKRHLRILPMYAGLPSFEQMKVFERVSRS 334
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RKV+++TNVAETSITI + YV+D G K YN + + L +S+AS NQRAGR
Sbjct: 335 VRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPVSQASANQRAGRG 394
Query: 136 GRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLP 195
GR++ G+ + LY+E+ + ++ + ++PE+ R L ++L K + + R F+S
Sbjct: 395 GRSRSGKCYRLYTEEAFDQLPQSTVPEMQRSNLAPVILQLKA-LGIDNVLRFH-FMS--- 449
Query: 196 EPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGNCNC 254
PP S+ A L +G D++ LT PLG RIA P +P +K L+ES GN C
Sbjct: 450 -PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES----GNFGC 504
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 265 (98.3 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 70/182 (38%), Positives = 105/182 (57%)
Query: 76 MRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRA 135
+RK+++STN+AETSITID V YVVD G K Y+S+ L SL S++S NQRAGRA
Sbjct: 358 IRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESGLESLVIVPTSKSSANQRAGRA 417
Query: 136 GRTKPGESFHLYSEDRYRRMA-EYSLPEIFRKPLEQILLTCK-VG-ESLYSTERCSSFLS 192
GR++ G+ + LY+E Y ++ + ++PEI R L +L K +G +++ + + F+S
Sbjct: 418 GRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTILQLKALGIDNILNFD----FIS 473
Query: 193 QLPEPPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVESVIYKGN 251
Q PP +S+ L +G D LT P G +A P P SK +++S N
Sbjct: 474 Q---PPS-SSLIRGLEVLYGLGALDDNGKLTNPTGMIMAEFPTDPTFSKMIIQSSSNGFN 529
Query: 252 CN 253
C+
Sbjct: 530 CS 531
Score = 43 (20.2 bits), Expect = 6.9e-24, Sum P(2) = 6.9e-24
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 4 NYLYCWQTTF--FYSTHFPCPSFPGAILCFLPGWQDIIQVSRVL 45
NY+ QTT H P PG IL FL G ++I ++ + L
Sbjct: 268 NYI---QTTIQTIIDIHTTQP--PGDILVFLTGQEEIEKLIQTL 306
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 281 (104.0 bits), Expect = 1.3e-23, P = 1.3e-23
Identities = 74/217 (34%), Positives = 122/217 (56%)
Query: 47 AIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKE 106
+I GLL+ + + T+ Q IF P G+RK V+STN+A TS+TI+ V YVVD+G K+
Sbjct: 258 SIEGLLILPLYGSMSTDQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQ 317
Query: 107 TRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFR 165
+N + L L+ IS++ QRAGRAGRT G+S+ LYS + + + M ++++PEI R
Sbjct: 318 LNHNPRVGLDILEVVPISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKR 377
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEE--NLT 223
L ++LT K S++ R +L + P+ I A +L D+ ++T
Sbjct: 378 TSLTSVILTLKC-LSVHDVIRFP-YLDR----PEERHILEALKQLYQCDAIDRTRRGHVT 431
Query: 224 PLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLIVP 260
LG+ + P P LS A++++ + +C +++P
Sbjct: 432 RLGEFLVQFPLPPNLSCAVIKAA----SLDCEDMLLP 464
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 281 (104.0 bits), Expect = 1.6e-23, P = 1.6e-23
Identities = 76/246 (30%), Positives = 122/246 (49%)
Query: 15 YSTHFPCPSFPGAILCFLPGWQDIIQVSRVLS--------AIPGLLVTMAHSKLDTEVQG 66
+ H+ P PG IL FL G + + + +++ ++P + V + L Q
Sbjct: 393 FQIHYKEP-IPGDILVFLTGQETVEALENLVNEYATGMDPSLPKIQVLPLFAALPQAAQQ 451
Query: 67 AIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRA 126
+F PP RK++L+TN+AETS+T+ V YVVD G K ++ ++ L SL + IS++
Sbjct: 452 RVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGLDSLLVKPISKS 511
Query: 127 SVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTER 186
+ QR GRAGR PG+ + LY+E Y + E + PEI R L Q +L K +
Sbjct: 512 AAIQRKGRAGREAPGQCYRLYTEKDYLALDEVNTPEILRCDLSQAILNMKAR----GVDN 567
Query: 187 CSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVESV 246
F L PP A + A +L + D+ ++ G IA +P P L + L+ +
Sbjct: 568 VIEF-PFLTRPPREA-LEKALLQLLSIEALDETGKISETGSHIAKLPLTPTLGRVLLAAS 625
Query: 247 IYKGNC 252
+ +C
Sbjct: 626 DFGPDC 631
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 283 (104.7 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 80/247 (32%), Positives = 124/247 (50%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+++P L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K
Sbjct: 578 ASLP-LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 636
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S W+S+AS +QRAGRAGRT+PG + LYS + ++ PEI R
Sbjct: 637 KRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQFPPPEITR 696
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEEN---- 221
+P+E ++L K + E+ +F P PP ++ +A L +G +
Sbjct: 697 RPVEDLILQMKA----LNIEKVINF--PFPTPPSVEALIAAEELLIALGALQAPQKTESV 750
Query: 222 -----------LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGL--IVPKSKREGRQ 268
+T LG+ +A P P+ +K L S + C Y + + + RE +
Sbjct: 751 KQLQRSWLGCPITALGRTMATFPVAPRYAKMLALS--RQHGCLPYAITIVAAMTVRELFE 808
Query: 269 DRRKPAA 275
+ +PAA
Sbjct: 809 ELDRPAA 815
>UNIPROTKB|E1BNQ2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 EMBL:DAAA02045204
IPI:IPI00698261 RefSeq:NP_001192890.1 UniGene:Bt.8113 PRIDE:E1BNQ2
Ensembl:ENSBTAT00000027206 GeneID:529207 KEGG:bta:529207
OMA:ANCRDAL NextBio:20874985 Uniprot:E1BNQ2
Length = 1155
Score = 283 (104.7 bits), Expect = 1.7e-23, P = 1.7e-23
Identities = 83/247 (33%), Positives = 124/247 (50%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+++P L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K
Sbjct: 582 ASLP-LHVLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVK 640
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S W+S+AS +QRAGRAGRT+PG + LYS + +Y PEI R
Sbjct: 641 KRHYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEKYPPPEITR 700
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFD-------- 217
+P+E ++L K + E+ +F P PP ++ +A L +G
Sbjct: 701 RPVEDLILQMKA----LNIEKVINF--PFPTPPSVEALIAAEELLIALGALQAPPKTERV 754
Query: 218 ---QEENL----TPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGL--IVPKSKREGRQ 268
Q L T LG+ +A P P+ +K L S + C Y + + + RE +
Sbjct: 755 KQLQRSRLSCPITELGRTMATFPVAPRYAKMLALS--RQHGCLPYTITIVAAMTVRELFE 812
Query: 269 DRRKPAA 275
+ +PAA
Sbjct: 813 ELDRPAA 819
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 280 (103.6 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 72/197 (36%), Positives = 104/197 (52%)
Query: 57 HSKLDTEVQGAIFGHPPPGM-------RKVVLSTNVAETSITIDDVAYVVDTGCHKETRY 109
+ L + Q IF PP + RK +++TN+AETS+TID + YVVD G K+ Y
Sbjct: 359 YGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFSKQKIY 418
Query: 110 NSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPL 168
N++ + SL ISRAS QRAGRAGRT+PG+ F LY+E +++ + E + PEI R L
Sbjct: 419 NARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEILRSNL 478
Query: 169 EQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKR 228
+L K + F +PP P ++ A EL + + + +LT LG
Sbjct: 479 SNTILELKK----LGVDDLVHF--DFMDPPAPETMMRALEELNYLSCLNDDGDLTDLGHM 532
Query: 229 IAAMPCHPKLSKALVES 245
+ P P L+ LV S
Sbjct: 533 ASEYPLDPALAVMLVSS 549
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 282 (104.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 73/199 (36%), Positives = 111/199 (55%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
+S+L +E Q IF +RK+++STN+AETS+T+D + YV+DTG K YN +
Sbjct: 778 YSQLSSEQQSKIF--KKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTC 175
L IS+A+ NQR+GRAGRT G + LY+E+ + + + ++PEI R L ++L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLL 895
Query: 176 KVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCH 235
K SL+ + F + P SI ++ EL ++G + E NLT +G+++ P
Sbjct: 896 K---SLH-VQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLD 949
Query: 236 PKLSKALVESVIYKGNCNC 254
P LSK VIY N C
Sbjct: 950 PPLSKI----VIYSQNFQC 964
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 282 (104.3 bits), Expect = 2.2e-23, P = 2.2e-23
Identities = 73/199 (36%), Positives = 111/199 (55%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
+S+L +E Q IF +RK+++STN+AETS+T+D + YV+DTG K YN +
Sbjct: 778 YSQLSSEQQSKIF--KKYDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQTIGMD 835
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYR-RMAEYSLPEIFRKPLEQILLTC 175
L IS+A+ NQR+GRAGRT G + LY+E+ + + + ++PEI R L ++L
Sbjct: 836 VLQVTPISQANANQRSGRAGRTGAGICYRLYTENTFLCDLYQNNIPEIQRSNLSNVVLLL 895
Query: 176 KVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCH 235
K SL+ + F + P SI ++ EL ++G + E NLT +G+++ P
Sbjct: 896 K---SLH-VQNLFEF--DFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQFPLD 949
Query: 236 PKLSKALVESVIYKGNCNC 254
P LSK VIY N C
Sbjct: 950 PPLSKI----VIYSQNFQC 964
>UNIPROTKB|B4DVG8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 HOGENOM:HOG000175261 EMBL:AC009087
UniGene:Hs.151218 HGNC:HGNC:17211 ChiTaRS:DHX38 EMBL:AK301074
IPI:IPI00909589 SMR:B4DVG8 STRING:B4DVG8 Ensembl:ENST00000536867
UCSC:uc010vmp.2 HOVERGEN:HBG093770 Uniprot:B4DVG8
Length = 539
Score = 275 (101.9 bits), Expect = 2.7e-23, P = 2.7e-23
Identities = 64/182 (35%), Positives = 103/182 (56%)
Query: 65 QGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWIS 124
Q IF P G+RK +++TN+AETS+T+D + +V+D+G K +N + + +L IS
Sbjct: 99 QAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNPRIGMDALQIYPIS 158
Query: 125 RASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYS 183
+A+ NQR+GRAGRT PG+ F LY++ Y+ + ++PEI R L ++L K SL
Sbjct: 159 QANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLANVVLLLK---SL-G 214
Query: 184 TERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
+ F +PP ++ ++ +L ++G D LT G+ + P P LSK L+
Sbjct: 215 VQDLLQF--HFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPLDPALSKMLI 272
Query: 244 ES 245
S
Sbjct: 273 VS 274
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 282 (104.3 bits), Expect = 2.8e-23, P = 2.8e-23
Identities = 82/235 (34%), Positives = 114/235 (48%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI--PGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G++L FLPG +I + LS + L V HS + E Q +F P PG RK++LST
Sbjct: 347 GSVLVFLPGLAEIQYMKEALSKLVRKRLQVYPLHSTVTLEEQNGVFLVPVPGYRKIILST 406
Query: 84 NVAETSITIDDVAYVVD------TGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
N+AE+S+T+ DV YV+D C KET Y L W S+ S NQR GRAGR
Sbjct: 407 NIAESSVTVPDVKYVIDFCLVRQLACDKETNYRC------LRITWASKTSCNQRRGRAGR 460
Query: 138 TKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
G + L + + + +S+PE+ R PL LL K+ + R S LS
Sbjct: 461 VSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDM--GDPR--SVLSTALT 516
Query: 197 PPDPASITSAATELKLMGVFDQEEN--------LTPLGKRIAAMPCHPKLSKALV 243
PP I +LK +G + N LT LG+ +A +P +L K +V
Sbjct: 517 PPILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIV 571
>RGD|1306837 [details] [associations]
symbol:Dhx37 "DEAH (Asp-Glu-Ala-His) box polypeptide 37"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
RGD:1306837 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647
OMA:AKLQPRT OrthoDB:EOG4P2Q1J IPI:IPI00391385 RefSeq:NP_001099396.2
UniGene:Rn.24493 Ensembl:ENSRNOT00000030823 GeneID:288647
KEGG:rno:288647 UCSC:RGD:1306837 NextBio:628468 ArrayExpress:D4A1R0
Uniprot:D4A1R0
Length = 1150
Score = 280 (103.6 bits), Expect = 3.6e-23, P = 3.6e-23
Identities = 80/247 (32%), Positives = 126/247 (51%)
Query: 46 SAIPGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHK 105
+++P L V +S L E Q +F PP G R V++TNVAETS+TI + YVVD G K
Sbjct: 577 ASLP-LHVLPLYSLLAPEKQAQVFKPPPEGTRLCVIATNVAETSLTIPGIKYVVDCGKVK 635
Query: 106 ETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFR 165
+ Y+ + S W+S+AS +QRAGRAGRT+PG + LYS + ++ PEI R
Sbjct: 636 KRYYDRVTGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQFPPPEITR 695
Query: 166 KPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFD---QEENL 222
+P+E ++L K + E+ +F P PP ++ +A L +G ++E +
Sbjct: 696 RPVEDLILQMKA----LNIEKVINF--PFPTPPSVEALIAAEELLIALGALQAPPKQERM 749
Query: 223 ------------TPLGKRIAAMPCHPKLSKALVESVIYKGNCNCY--GLIVPKSKREGRQ 268
T LG+ ++ P P+ +K L S + C Y ++ + RE +
Sbjct: 750 KKLQMSQLSCPITALGRTMSTFPVAPRYAKMLALS--QQHGCLPYTIAIVAAMTVRELFE 807
Query: 269 DRRKPAA 275
+ +PAA
Sbjct: 808 ELDRPAA 814
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 275 (101.9 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 84/230 (36%), Positives = 121/230 (52%)
Query: 25 PGAILCFLPGWQDI------IQVSRVLSA--IPGLLVTMAHSKLDTEVQGAIFGHPPPGM 76
PG IL FL G ++I I+ S + ++ L+ H+ L + Q +F
Sbjct: 236 PGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQTLVPLPLHAGLTVDEQMRVFNIYDGDF 295
Query: 77 RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAG 136
RKV+ STN+AETSITID + YVVD+G +K+ YN L N IS++S QR+GRAG
Sbjct: 296 RKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYNPYTRTSKLINVPISKSSAIQRSGRAG 355
Query: 137 RTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPE 196
RT G+ F LY+E Y M E +I + ++L K G L + + F+
Sbjct: 356 RTMRGKVFRLYTEKAYSLMKEEFEADILNCDMSPLVLFLK-GLGLKNILQFPFFV----R 410
Query: 197 PPDPASITSAATELKLMGVFDQEENLT-PLGKRIAAMPCHPKLSKALVES 245
PP + +A +L L+GV D+ NLT PLG +I+ +SKAL+ S
Sbjct: 411 PPT-VHLMAALEDLYLLGVLDESGNLTDPLGIQISNSFLDANISKALLTS 459
>UNIPROTKB|Q8EJ41 [details] [associations]
symbol:hrpB "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 275 (101.9 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 74/224 (33%), Positives = 116/224 (51%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSA-IPGLLVTMA--HSKLDTEVQGAIFGHPPPGMRKV 79
S P IL FLPG +I++V++ L+ + G V + + +L + Q G RK+
Sbjct: 214 SGPQDILVFLPGKAEILRVAQYLAERLDGSRVAICPLYGELSAQEQDRAIKADASGRRKI 273
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VLSTNVAE+S+TI+ + V+D+G ++ +N K + L + IS+AS QRAGRAGR
Sbjct: 274 VLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLA 333
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G L+ ++ ++R+ + PEI + L + C Y + S L L PP
Sbjct: 334 AGVCIRLWGQEEHQRLLKADEPEISQADLVSMAHDCA-----YWGAKSFSDLLLLTAPPS 388
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
+ A L+ + V D + LT GK + CHP+L+ L+
Sbjct: 389 -VNEALAWQLLRRLDVVDGQNKLTAHGKAAYELGCHPRLAHMLL 431
>TIGR_CMR|SO_0632 [details] [associations]
symbol:SO_0632 "ATP-dependent helicase HrpB" species:211586
"Shewanella oneidensis MR-1" [GO:0008150 "biological_process"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000244609 KO:K03579 OMA:GILTRMI InterPro:IPR010225
InterPro:IPR013689 Pfam:PF08482 PIRSF:PIRSF005496
TIGRFAMs:TIGR01970 RefSeq:NP_716265.1 HSSP:P26664
ProteinModelPortal:Q8EJ41 GeneID:1168495 KEGG:son:SO_0632
PATRIC:23520950 ProtClustDB:CLSK905853 Uniprot:Q8EJ41
Length = 835
Score = 275 (101.9 bits), Expect = 7.4e-23, P = 7.4e-23
Identities = 74/224 (33%), Positives = 116/224 (51%)
Query: 23 SFPGAILCFLPGWQDIIQVSRVLSA-IPGLLVTMA--HSKLDTEVQGAIFGHPPPGMRKV 79
S P IL FLPG +I++V++ L+ + G V + + +L + Q G RK+
Sbjct: 214 SGPQDILVFLPGKAEILRVAQYLAERLDGSRVAICPLYGELSAQEQDRAIKADASGRRKI 273
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
VLSTNVAE+S+TI+ + V+D+G ++ +N K + L + IS+AS QRAGRAGR
Sbjct: 274 VLSTNVAESSLTIEGIGLVIDSGYKRQASFNPKTGVTRLSLKRISQASATQRAGRAGRLA 333
Query: 140 PGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPD 199
G L+ ++ ++R+ + PEI + L + C Y + S L L PP
Sbjct: 334 AGVCIRLWGQEEHQRLLKADEPEISQADLVSMAHDCA-----YWGAKSFSDLLLLTAPPS 388
Query: 200 PASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
+ A L+ + V D + LT GK + CHP+L+ L+
Sbjct: 389 -VNEALAWQLLRRLDVVDGQNKLTAHGKAAYELGCHPRLAHMLL 431
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 278 (102.9 bits), Expect = 8.1e-23, P = 8.1e-23
Identities = 76/239 (31%), Positives = 127/239 (53%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI----PGLLVTMAH--SKLDTEVQGAIFGHPPPGMRKV 79
GA+L FLPG +I ++ L+ + P + V++ S + E Q +F PPPG RK+
Sbjct: 366 GAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKI 425
Query: 80 VLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTK 139
+L+TN+AE+SIT+ DV+YV+D K ++ SL W S+A+ QRAGR GR +
Sbjct: 426 ILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLR 485
Query: 140 PGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
G + + ++ Y+R M E+ +PE+ R PL+ +L KV E + LS PP
Sbjct: 486 SGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALS----PP 541
Query: 199 DPASITSAATELKLMG--------VFDQ-EENLTPLGKRIAAMPCHPKLSKALVESVIY 248
+ + I + LK +G ++D + +LT G ++ +P + S+ ++ I+
Sbjct: 542 NLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYIF 600
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 273 (101.2 bits), Expect = 9.4e-23, P = 9.4e-23
Identities = 69/197 (35%), Positives = 112/197 (56%)
Query: 65 QGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWIS 124
Q IF PPPG+RK V+STN++ TS+TID + YVVD G K+ +N + L L+ IS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 125 RASVNQRAGRAGRTKPGESFHLYSEDRYRR-MAEYSLPEIFRKPLEQILLTCKVGESLYS 183
++ QR+GRAGRT G+ F +YS+D + + M ++ +PEI R L ++LT K +++
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKC-LAIHD 397
Query: 184 TERCSSFLSQLPEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
R +L +PP+ I A +L D+ ++T LG + P P L+ A++
Sbjct: 398 VIRFP-YL----DPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVI 452
Query: 244 ESVIYKGNCNCYGLIVP 260
++ + +C L++P
Sbjct: 453 KAA----SLDCEDLLLP 465
>TIGR_CMR|GSU_1838 [details] [associations]
symbol:GSU_1838 "ATP-dependent helicase HrpB"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004386 "helicase
activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03579 OMA:GILTRMI InterPro:IPR010225 InterPro:IPR013689
Pfam:PF08482 PIRSF:PIRSF005496 TIGRFAMs:TIGR01970
HOGENOM:HOG000244610 RefSeq:NP_952888.1 ProteinModelPortal:Q74C37
DNASU:2688652 GeneID:2688652 KEGG:gsu:GSU1838 PATRIC:22026533
ProtClustDB:CLSK828597 BioCyc:GSUL243231:GH27-1781-MONOMER
Uniprot:Q74C37
Length = 846
Score = 272 (100.8 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 79/224 (35%), Positives = 116/224 (51%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIPGL---LVTMAHSKLD-TEVQGAIFGHPPPGMRKVVL 81
G IL FLPG +I + ++L+ P L LV + L E + AI P PG RKVVL
Sbjct: 214 GDILAFLPGVGEIRRCGQLLADDPPLHAPLVVPLYGDLPFVEQERAIL--PVPGRRKVVL 271
Query: 82 STNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPG 141
+T +AETS+TI+ V VVD G + RY+ L L + +S AS QRAGRAGR PG
Sbjct: 272 ATTIAETSLTIEGVRVVVDGGQTRRLRYDPASGLNRLVTERVSAASATQRAGRAGRLGPG 331
Query: 142 ESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPA 201
+ L+ E + + PEI L + L + + +S L+ L +PP
Sbjct: 332 TCYRLWPEHDQQALLAADPPEILIADLAPLALDL----AHWGVSDPAS-LAWL-DPPPRG 385
Query: 202 SITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
++ A LK + D + +T G+R+A +P HP+L+ L+ +
Sbjct: 386 ALEEARNLLKSLDALDGQGMITETGRRMAELPLHPRLAHMLLRA 429
>WB|WBGene00015525 [details] [associations]
symbol:rha-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0006898 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0016246 GO:GO:0071688 GO:GO:0000003 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:AKLQPRT EMBL:FO080280 PIR:H88533 RefSeq:NP_498895.1
UniGene:Cel.10874 ProteinModelPortal:P34305 SMR:P34305
IntAct:P34305 STRING:P34305 PaxDb:P34305 EnsemblMetazoa:C06E1.10
GeneID:176207 KEGG:cel:CELE_C06E1.10 UCSC:C06E1.10 CTD:176207
WormBase:C06E1.10 InParanoid:P34305 NextBio:891582 Uniprot:P34305
Length = 1148
Score = 259 (96.2 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 70/191 (36%), Positives = 98/191 (51%)
Query: 57 HSKLDTEVQGAIFGHPPPGMRKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLV 116
+S L Q +F P GMR V+STNVAETS+TI V YV+D G K Y+S +
Sbjct: 581 YSLLSMGKQRRVFDETPAGMRLCVISTNVAETSLTIPGVKYVIDGGFEKRRLYDSITGVS 640
Query: 117 SLDNQWISRASVNQRAGRAGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK 176
IS+AS +QRAGRAGR G ++ LYS Y+ +++ PEI KP +Q++L K
Sbjct: 641 RFAVCRISQASGDQRAGRAGRISAGHAYRLYSSAVYQDFVKFADPEILSKPADQLVLHLK 700
Query: 177 VGESLYSTERCSSFLSQLPEPPDPASITSAATELKLMGVFDQ-------EENLTPLGKRI 229
S+ + + +F P PD + SA L +G + E +T LGK +
Sbjct: 701 ---SM-NIVKVVNF--PFPSAPDEQMLESAEKRLCRLGALSESTKNGKTEARITKLGKTL 754
Query: 230 AAMPCHPKLSK 240
A P P +K
Sbjct: 755 AVFPLAPSYAK 765
Score = 42 (19.8 bits), Expect = 1.8e-22, Sum P(2) = 1.8e-22
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 25 PGAILCFLPGWQDIIQV 41
PGAIL F+ G ++ Q+
Sbjct: 451 PGAILVFVTGQHEVKQL 467
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 270 (100.1 bits), Expect = 2.5e-22, P = 2.5e-22
Identities = 81/228 (35%), Positives = 118/228 (51%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI-PGL------LVTMA-HSKLDTEVQGAIFGHPPPGMR 77
G +LCFLPG ++I + L + P L +V + ++ L Q IF P G R
Sbjct: 390 GDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIVPLPLYAALSPGQQSKIFEKLPKGRR 449
Query: 78 KVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGR 137
KV+L+TN+AETSIT+ V YV+D+G K + L +L IS+AS QRAGRAGR
Sbjct: 450 KVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNLGLSTLLTTPISQASARQRAGRAGR 509
Query: 138 TKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCK-VG-ESLYSTERCSSFLSQLP 195
G+ F LY E Y + + EI R + +LT K +G + L + S+L
Sbjct: 510 ESEGKVFRLYPESTYMALPKQQESEIKRNDIILPVLTLKKLGVDDLLNW----SWL---- 561
Query: 196 EPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALV 243
E P +I SA L +G + +T LG +++ +P P+LS L+
Sbjct: 562 EYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPPQLSVVLI 609
>SGD|S000001561 [details] [associations]
symbol:DHR2 "Predominantly nucleolar DEAH-box ATP-dependent
RNA helicase" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0042254 "ribosome biogenesis" evidence=IDA;TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001561 GO:GO:0005524 GO:GO:0005730
EMBL:BK006944 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GO:GO:0003724 GO:GO:0000462 EMBL:AF005090 EMBL:L15328 EMBL:X75560
EMBL:Z28078 PIR:S37903 RefSeq:NP_012845.1 ProteinModelPortal:P36009
SMR:P36009 DIP:DIP-6424N IntAct:P36009 MINT:MINT-677951
STRING:P36009 PaxDb:P36009 PeptideAtlas:P36009 EnsemblFungi:YKL078W
GeneID:853784 KEGG:sce:YKL078W CYGD:YKL078w KO:K14781 OMA:PGQEEID
OrthoDB:EOG4F7RTB NextBio:974906 Genevestigator:P36009
GermOnline:YKL078W Uniprot:P36009
Length = 735
Score = 269 (99.8 bits), Expect = 2.6e-22, P = 2.6e-22
Identities = 78/231 (33%), Positives = 116/231 (50%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAI----------PGLLVTMAHSKLDTEVQGAIFGHPPPG 75
G ILCFLPG ++I + ++ I P ++ ++ L Q +F P G
Sbjct: 293 GDILCFLPGQEEIDKAVTIMEKIAKYVSDEAPVPLIVPYPLYAALPAVQQSLVFA-PIKG 351
Query: 76 M-RKVVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGR 134
RKVV STN+AETS+TI V +VVD+G K + + L +L IS+AS QR+GR
Sbjct: 352 FKRKVVFSTNIAETSVTISGVKFVVDSGLRKVKVWRHQLGLATLLTVPISQASAMQRSGR 411
Query: 135 AGRTKPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQL 194
AGR G+SF LY E Y ++ + S PEI R + +L K Y + ++
Sbjct: 412 AGRESEGKSFRLYCESDYVKLPKQSEPEIARSDVTSPVLMLK----RYGVDDLLNWTWF- 466
Query: 195 PEPPDPASITSAATELKLMGVFDQEENLTPLGKRIAAMPCHPKLSKALVES 245
E P +I EL +G D +T G+++A +P P LS L+++
Sbjct: 467 -ENPGKEAIVMGLQELYELGALDTRGKITKRGQQMALLPLQPHLSSVLIKA 516
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 271 (100.5 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 76/232 (32%), Positives = 121/232 (52%)
Query: 21 CPSFPGAILCFLPGWQDIIQVSRVLSA--IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
C G IL F+ G ++I + LS + + +++L Q IF P G R+
Sbjct: 297 CDEGLGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIF-QPHAG-RR 354
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TNVAETS+T+ + YV+D G + +RY+ + + L + IS+AS NQR GR GRT
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRT 414
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
+ G LYSE+ + E++ PEI R L ++L L E F+ E P
Sbjct: 415 EEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQM-TALGLGDIE-AFPFV----EAP 468
Query: 199 DPASITSAATELKLMGVF-----DQEENLTPLGKRIAAMPCHPKLSKALVES 245
D +I L+ +G D ++ LT GK++A +P P+L++ ++E+
Sbjct: 469 DKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEA 520
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 271 (100.5 bits), Expect = 4.0e-22, P = 4.0e-22
Identities = 76/232 (32%), Positives = 121/232 (52%)
Query: 21 CPSFPGAILCFLPGWQDIIQVSRVLSA--IPGLLVTMAHSKLDTEVQGAIFGHPPPGMRK 78
C G IL F+ G ++I + LS + + +++L Q IF P G R+
Sbjct: 297 CDEGLGDILIFMNGEREIRDTADALSKRNLRDTEIVPLYARLSAGEQNKIF-QPHAG-RR 354
Query: 79 VVLSTNVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRT 138
+VL+TNVAETS+T+ + YV+D G + +RY+ + + L + IS+AS NQR GR GRT
Sbjct: 355 IVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRT 414
Query: 139 KPGESFHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPP 198
+ G LYSE+ + E++ PEI R L ++L L E F+ E P
Sbjct: 415 EEGICIRLYSEEDFLSRPEFTDPEILRTNLASVILQM-TALGLGDIE-AFPFV----EAP 468
Query: 199 DPASITSAATELKLMGVF-----DQEENLTPLGKRIAAMPCHPKLSKALVES 245
D +I L+ +G D ++ LT GK++A +P P+L++ ++E+
Sbjct: 469 DKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDPRLARMVLEA 520
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 265 (98.3 bits), Expect = 1.0e-21, P = 1.0e-21
Identities = 77/231 (33%), Positives = 118/231 (51%)
Query: 27 AILCFLPGWQDIIQVSRVLSAI--PGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTN 84
++L FLPG +I + +L+++ L V HS + E Q +F P PG RK++LSTN
Sbjct: 114 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 173
Query: 85 VAETSITIDDVAYVVDTGCHKETRYNSKD-DLVSLDNQWISRASVNQRAGRAGRTKPGES 143
+AE+S+T+ DV YV+D C T +D + SL W S+ S NQR GRAGR G
Sbjct: 174 IAESSVTVPDVKYVIDF-CLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYC 232
Query: 144 FHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPAS 202
+ L +D + + ++ +PE+ R PL +L K L + L+ PP +
Sbjct: 233 YRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVK----LLDMGEPRALLATALSPPGLSD 288
Query: 203 ITSAATELKLMGVFD-----QEEN-----LTPLGKRIAAMPCHPKLSKALV 243
I LK +G ++EN LT LG+ +A +P + +L K +V
Sbjct: 289 IERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIV 339
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 265 (98.3 bits), Expect = 1.9e-21, P = 1.9e-21
Identities = 77/231 (33%), Positives = 118/231 (51%)
Query: 27 AILCFLPGWQDIIQVSRVLSAI--PGLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLSTN 84
++L FLPG +I + +L+++ L V HS + E Q +F P PG RK++LSTN
Sbjct: 387 SVLVFLPGLGEINYMHELLTSLVHKRLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTN 446
Query: 85 VAETSITIDDVAYVVDTGCHKETRYNSKD-DLVSLDNQWISRASVNQRAGRAGRTKPGES 143
+AE+S+T+ DV YV+D C T +D + SL W S+ S NQR GRAGR G
Sbjct: 447 IAESSVTVPDVKYVIDF-CLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYC 505
Query: 144 FHLYSEDRY-RRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPAS 202
+ L +D + + ++ +PE+ R PL +L K L + L+ PP +
Sbjct: 506 YRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVK----LLDMGEPRALLATALSPPGLSD 561
Query: 203 ITSAATELKLMGVFD-----QEEN-----LTPLGKRIAAMPCHPKLSKALV 243
I LK +G ++EN LT LG+ +A +P + +L K +V
Sbjct: 562 IERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIV 612
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 263 (97.6 bits), Expect = 2.8e-21, P = 2.8e-21
Identities = 76/255 (29%), Positives = 128/255 (50%)
Query: 26 GAILCFLPGWQDIIQVSRVLSAIP--GLLVTMAHSKLDTEVQGAIFGHPPPGMRKVVLST 83
G IL F+ G ++I + L+ + + +++L Q +F G R++VL+T
Sbjct: 291 GDILIFMSGEREIRDTADALNKLNLRHTEILPLYARLSNSEQNRVF-QSHSG-RRIVLAT 348
Query: 84 NVAETSITIDDVAYVVDTGCHKETRYNSKDDLVSLDNQWISRASVNQRAGRAGRTKPGES 143
NVAETS+T+ + YV+D G + +RY+ + + L + IS+AS NQR GR GR G
Sbjct: 349 NVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLPIEPISQASANQRKGRCGRVSEGIC 408
Query: 144 FHLYSEDRYRRMAEYSLPEIFRKPLEQILLTCKVGESLYSTERCSSFLSQLPEPPDPASI 203
LYSED + E++ PEI R L ++L + ++F E PD +I
Sbjct: 409 IRLYSEDDFLSRPEFTDPEILRTNLASVILQM----TALGLGDIAAF--PFVEAPDKRNI 462
Query: 204 TSAATELKLMGVFDQEEN-----LTPLGKRIAAMPCHPKLSKALVESVIYKGNCNCYGLI 258
L+ +G +E LTPLG++++ +P P+L++ ++E+ K C +I
Sbjct: 463 QDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLPVDPRLARMVLEA--QKHGCVREAMI 520
Query: 259 VPKSKREGRQDRRKP 273
+ S + R +P
Sbjct: 521 IT-SALSIQDPRERP 534
WARNING: HSPs involving 47 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.417 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 304 286 0.00086 115 3 11 22 0.50 33
33 0.42 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 297
No. of states in DFA: 608 (65 KB)
Total size of DFA: 215 KB (2120 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 28.28u 0.09s 28.37t Elapsed: 00:00:11
Total cpu time: 28.34u 0.09s 28.43t Elapsed: 00:00:12
Start: Thu Aug 15 15:28:18 2013 End: Thu Aug 15 15:28:30 2013
WARNINGS ISSUED: 2