BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1178
(144 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|157136797|ref|XP_001656912.1| centromere/microtubule binding protein cbf5 [Aedes aegypti]
gi|108880941|gb|EAT45166.1| AAEL003514-PA [Aedes aegypti]
Length = 527
Score = 260 bits (665), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 138/144 (95%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+DG+VT+HD+ DA YLYD HKDE++LRRVI+PLEGLLVGHKRII+K
Sbjct: 247 MLELRRVRSGIQSEKDGMVTMHDVLDAQYLYDNHKDETMLRRVIKPLEGLLVGHKRIIMK 306
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIEMD+EIVIV+TKGEAVALA+A MTT+TMA+CDHGV
Sbjct: 307 DSSVNAVCYGAKIMLPGVLRYEDGIEMDQEIVIVTTKGEAVALAIALMTTATMASCDHGV 366
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 367 CAKIKRVIMERDTYPRKWGLGPKA 390
>gi|195431316|ref|XP_002063689.1| GK15777 [Drosophila willistoni]
gi|194159774|gb|EDW74675.1| GK15777 [Drosophila willistoni]
Length = 1467
Score = 258 bits (659), Expect = 6e-67, Method: Composition-based stats.
Identities = 115/144 (79%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 1197 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 1256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 1257 DSSVNAVCYGAKIMLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMSSCDHGV 1316
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 1317 VAKIKRVIMERDTYPRKWGLGPKA 1340
>gi|289741503|gb|ADD19499.1| pseudouridine synthase [Glossina morsitans morsitans]
Length = 613
Score = 256 bits (653), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQ+E D +VT+HD+ DAMYLY+ HKDES+LRRVIRPLEGLL+ HKRII+K
Sbjct: 241 MLELRRVRSGIQTERDNIVTMHDVLDAMYLYENHKDESMLRRVIRPLEGLLINHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS++NAVCYGA+IMLPGVLRYEDGIE+D+EIVI +TKGEA+ LA+AQMTT+TMA+CDHGV
Sbjct: 301 DSSINAVCYGAKIMLPGVLRYEDGIEIDQEIVICTTKGEAICLAIAQMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|312373002|gb|EFR20835.1| hypothetical protein AND_19384 [Anopheles darlingi]
Length = 500
Score = 255 bits (651), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 119/144 (82%), Positives = 137/144 (95%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+DG+VT+HD+ DA YLY+ HKDES+LRRVI+PLEGLLVGHK II+K
Sbjct: 218 MLELRRVRSGIQSEKDGMVTMHDVLDAQYLYENHKDESMLRRVIKPLEGLLVGHKCIIMK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+D+EIVIV+TKGEAVALA+A MTT+TMA CDHGV
Sbjct: 278 DSSVNAVCYGAKIMLPGVLRYEDGIELDQEIVIVTTKGEAVALAIALMTTATMAGCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 338 VAKIKRVIMERDTYPRKWGLGPKA 361
>gi|158297969|ref|XP_318082.4| AGAP004739-PA [Anopheles gambiae str. PEST]
gi|157014582|gb|EAA13199.5| AGAP004739-PA [Anopheles gambiae str. PEST]
Length = 521
Score = 254 bits (650), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 117/144 (81%), Positives = 137/144 (95%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+DG+VT+HD+ DA YLY+ HKDES+LRRVI+PLEGLLVGHKRII+K
Sbjct: 246 MLELRRVRSGIQSEKDGMVTMHDVLDAQYLYENHKDESMLRRVIKPLEGLLVGHKRIIMK 305
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I+LPGVLRYEDGIE+D+EIVIV+TKGEA+AL +A MTT+TMA CDHGV
Sbjct: 306 DSSVNAVCYGAKILLPGVLRYEDGIEIDQEIVIVTTKGEAIALGIALMTTATMAGCDHGV 365
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 366 VAKIKRVIMERDTYPRKWGLGPKA 389
>gi|223950515|gb|ACN29341.1| MIP05689p [Drosophila melanogaster]
Length = 534
Score = 252 bits (643), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 267 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 326
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 327 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 386
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 387 VAKIKRVIMERDTYPRKWGLGPKA 410
>gi|375065910|gb|AFA28436.1| FI18403p1 [Drosophila melanogaster]
Length = 534
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 267 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 326
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 327 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 386
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 387 VAKIKRVIMERDTYPRKWGLGPKA 410
>gi|157816752|gb|ABV82369.1| LD07711p [Drosophila melanogaster]
Length = 489
Score = 251 bits (642), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 262 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 321
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 322 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 381
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 382 VAKIKRVIMERDTYPRKWGLGPKA 405
>gi|19528063|gb|AAL90146.1| AT23018p, partial [Drosophila melanogaster]
Length = 468
Score = 251 bits (642), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|4406198|gb|AAD19897.1| minifly protein [Drosophila melanogaster]
Length = 508
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|195489554|ref|XP_002092788.1| GE14387 [Drosophila yakuba]
gi|194178889|gb|EDW92500.1| GE14387 [Drosophila yakuba]
Length = 508
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|195586327|ref|XP_002082929.1| GD11839 [Drosophila simulans]
gi|194194938|gb|EDX08514.1| GD11839 [Drosophila simulans]
Length = 508
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|17975520|ref|NP_525120.1| nucleolar protein at 60B, isoform A [Drosophila melanogaster]
gi|62471759|ref|NP_001014547.1| nucleolar protein at 60B, isoform B [Drosophila melanogaster]
gi|281364183|ref|NP_001163286.1| nucleolar protein at 60B, isoform C [Drosophila melanogaster]
gi|281364189|ref|NP_001163289.1| nucleolar protein at 60B, isoform F [Drosophila melanogaster]
gi|3914156|sp|O44081.1|DKC1_DROME RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Nucleolar protein AT band 60B; AltName:
Full=Protein minifly
gi|2661227|gb|AAC97117.1| nucleolar protein at band 60B [Drosophila melanogaster]
gi|4322557|gb|AAD16092.1| minifly protein [Drosophila melanogaster]
gi|7291757|gb|AAF47178.1| nucleolar protein at 60B, isoform A [Drosophila melanogaster]
gi|61678336|gb|AAX52682.1| nucleolar protein at 60B, isoform B [Drosophila melanogaster]
gi|112382762|gb|ABI17547.1| MFL protein [Drosophila melanogaster]
gi|272432682|gb|ACZ94558.1| nucleolar protein at 60B, isoform C [Drosophila melanogaster]
gi|272432685|gb|ACZ94561.1| nucleolar protein at 60B, isoform F [Drosophila melanogaster]
Length = 508
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|194886190|ref|XP_001976568.1| GG22950 [Drosophila erecta]
gi|190659755|gb|EDV56968.1| GG22950 [Drosophila erecta]
Length = 508
Score = 251 bits (641), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|195341866|ref|XP_002037526.1| GM18314 [Drosophila sechellia]
gi|194132376|gb|EDW53944.1| GM18314 [Drosophila sechellia]
Length = 502
Score = 251 bits (641), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|170041155|ref|XP_001848339.1| H/ACA ribonucleoprotein complex subunit 4 [Culex quinquefasciatus]
gi|167864704|gb|EDS28087.1| H/ACA ribonucleoprotein complex subunit 4 [Culex quinquefasciatus]
Length = 515
Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+DG+VT+HD+ DA YLY+ HKDES+LRRVI+PLEGLL+GHKRII+K
Sbjct: 242 MLELRRVRSGIQSEKDGMVTMHDVLDAQYLYENHKDESMLRRVIKPLEGLLIGHKRIIMK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IM+PGVLRYEDGIE+D+EIVIV+TKGEA+AL +A MTT+TMA+CDHGV
Sbjct: 302 DSSVNAVCYGAKIMIPGVLRYEDGIEVDQEIVIVTTKGEAIALGVALMTTATMASCDHGV 361
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 362 CAKIKRVIMERDLYPRKWGLGPKA 385
>gi|170029441|ref|XP_001842601.1| H/ACA ribonucleoprotein complex subunit 4 [Culex quinquefasciatus]
gi|167862432|gb|EDS25815.1| H/ACA ribonucleoprotein complex subunit 4 [Culex quinquefasciatus]
Length = 521
Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+DG+VT+HD+ DA YLY+ HKDES+LRRVI+PLEGLL+GHKRII+K
Sbjct: 242 MLELRRVRSGIQSEKDGMVTMHDVLDAQYLYENHKDESMLRRVIKPLEGLLIGHKRIIMK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IM+PGVLRYEDGIE+D+EIVIV+TKGEA+AL +A MTT+TMA+CDHGV
Sbjct: 302 DSSVNAVCYGAKIMIPGVLRYEDGIEVDQEIVIVTTKGEAIALGVALMTTATMASCDHGV 361
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 362 CAKIKRVIMERDLYPRKWGLGPKA 385
>gi|194756825|ref|XP_001960671.1| GF11381 [Drosophila ananassae]
gi|190621969|gb|EDV37493.1| GF11381 [Drosophila ananassae]
Length = 515
Score = 251 bits (640), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDESLLRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESLLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 301 DSSVNAVCYGAKIMLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMSSCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYP KWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPSKWGLGPKA 384
>gi|195124820|ref|XP_002006885.1| GI21310 [Drosophila mojavensis]
gi|193911953|gb|EDW10820.1| GI21310 [Drosophila mojavensis]
Length = 507
Score = 251 bits (640), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLL+ HKRII+K
Sbjct: 239 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLINHKRIIMK 298
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+++EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 299 DSSVNAVCYGAKIMLPGVLRYEDGIEIEQEIVICTTKGEAICLAIAMMTTATMSSCDHGV 358
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 359 VAKIKRVIMERDTYPRKWGLGPKA 382
>gi|195381389|ref|XP_002049435.1| GJ21579 [Drosophila virilis]
gi|194144232|gb|EDW60628.1| GJ21579 [Drosophila virilis]
Length = 508
Score = 250 bits (638), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 136/144 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRV++PLEGLL+ HKRII+K
Sbjct: 239 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVVKPLEGLLINHKRIIMK 298
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+++EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 299 DSSVNAVCYGAKIMLPGVLRYEDGIEIEQEIVICTTKGEAICLAIAMMTTATMSSCDHGV 358
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 359 VAKIKRVIMERDTYPRKWGLGPKA 382
>gi|195171175|ref|XP_002026383.1| GL19980 [Drosophila persimilis]
gi|198461398|ref|XP_002138996.1| GA24087 [Drosophila pseudoobscura pseudoobscura]
gi|194111285|gb|EDW33328.1| GL19980 [Drosophila persimilis]
gi|198137332|gb|EDY69554.1| GA24087 [Drosophila pseudoobscura pseudoobscura]
Length = 519
Score = 249 bits (635), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 114/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSEGDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 301 DSSVNAVCYGAKIMLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMSSCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDIYPRKWGLGPKA 384
>gi|195023790|ref|XP_001985751.1| GH20974 [Drosophila grimshawi]
gi|193901751|gb|EDW00618.1| GH20974 [Drosophila grimshawi]
Length = 509
Score = 248 bits (634), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLL+ HKRII+K
Sbjct: 239 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLINHKRIIMK 298
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+IMLPGVLRYEDGIE+++EIVI +TKGEA+ LA+A MTT+TM++CDHGV
Sbjct: 299 DSSVNAVCYGAKIMLPGVLRYEDGIEIEQEIVICTTKGEAICLAIALMTTATMSSCDHGV 358
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 359 VAKIKRVIMERDIYPRKWGLGPKA 382
>gi|321459377|gb|EFX70431.1| hypothetical protein DAPPUDRAFT_228342 [Daphnia pulex]
Length = 510
Score = 245 bits (625), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++GL+T+HD+ DA +L+D HKDE+ LRRVIRPLE L++ HKRII+K
Sbjct: 237 MAELRRVRSGIQSEKEGLMTMHDVIDAQWLHDNHKDETYLRRVIRPLEALMMSHKRIIMK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRYE+GIE++EEIVIV+TKGEAVALA+A MTT+TMA+CDHG+
Sbjct: 297 DSAVNAVCYGAKIMLPGVLRYENGIELNEEIVIVTTKGEAVALAIALMTTTTMASCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+M+RDTYPRKWGLGPK+
Sbjct: 357 VAKIKRVVMERDTYPRKWGLGPKA 380
>gi|357607596|gb|EHJ65601.1| hypothetical protein KGM_12643 [Danaus plexippus]
Length = 282
Score = 245 bits (625), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 133/144 (92%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR RSGIQ E++G+VT+HDI DA + Y+ HKDE+ LRRVI+PLEGLLV HKRI +K
Sbjct: 15 MIELRRVRSGIQGEKEGMVTMHDILDAQWAYENHKDETYLRRVIKPLEGLLVAHKRIFIK 74
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+++LPG+LRYEDGIE+D+EIVIV+TKGEAVALA+A MTTSTMA+CDHGV
Sbjct: 75 DSAVNAVCYGAKVLLPGILRYEDGIEVDQEIVIVTTKGEAVALAIALMTTSTMASCDHGV 134
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AK+KRVIM+RDTYPRKWGLGPK+
Sbjct: 135 AAKLKRVIMERDTYPRKWGLGPKA 158
>gi|91093224|ref|XP_967291.1| PREDICTED: similar to AGAP004739-PA [Tribolium castaneum]
gi|270016592|gb|EFA13038.1| hypothetical protein TcasGA2_TC010569 [Tribolium castaneum]
Length = 502
Score = 241 bits (616), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 133/144 (92%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE+D + T+HD+ DA +LY+ HKDE+ LRRVIRPLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSEQDQMATMHDVLDAQWLYENHKDENYLRRVIRPLEGLLVKHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I+LPG+LRYED IE++EEIVIV+TKGEA+AL +A MTT+T+A+CDHGV
Sbjct: 301 DSSVNAVCYGAKILLPGILRYEDNIELNEEIVIVTTKGEAIALGIALMTTATIASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGP++
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPRT 384
>gi|242019416|ref|XP_002430157.1| minifly protein, putative [Pediculus humanus corporis]
gi|212515248|gb|EEB17419.1| minifly protein, putative [Pediculus humanus corporis]
Length = 512
Score = 241 bits (615), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/144 (77%), Positives = 132/144 (91%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRRNRSGIQSE DGLVT+HD+ DA ++YD +KDES LRRVI+PLEGLLV HKRII+K
Sbjct: 235 MIELRRNRSGIQSESDGLVTMHDVLDAQWVYDNYKDESYLRRVIKPLEGLLVQHKRIIMK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+V+A+CYGA+I LPGVLRYEDGIE+ EEIVIV+TKGEA+ +A A MTT+T+A+CDHGV
Sbjct: 295 DSSVSAICYGAKITLPGVLRYEDGIELGEEIVIVTTKGEAICIANALMTTATIASCDHGV 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPR+WGLGPK+
Sbjct: 355 VAKIKRVIMERDLYPRRWGLGPKA 378
>gi|197245421|ref|NP_001127802.1| Nucleolar protein at 60B homolog [Nasonia vitripennis]
Length = 518
Score = 241 bits (614), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 113/144 (78%), Positives = 130/144 (90%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI SE+DGLVT+HDI DA +LY+ H DES LRRVIRPLE LLV HKRII+K
Sbjct: 231 MQELRRNRSGIMSEKDGLVTMHDILDAQWLYENHGDESYLRRVIRPLESLLVNHKRIIVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVL Y++GIE+++EIVIV+TKGEAVALA+A MTT TM+ CDHGV
Sbjct: 291 DSAVNAICYGAKIMLPGVLMYDEGIELNQEIVIVTTKGEAVALAIALMTTPTMSACDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 351 VAKIKRVIMERDAYPRKWGLGPKA 374
>gi|380013775|ref|XP_003690924.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Apis
florea]
Length = 517
Score = 240 bits (612), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSG+QSE DG+VT+HDI DA +LY+ H DES LRRVI+PLE LL+ HKRII+K
Sbjct: 232 MQELRRNRSGVQSENDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLINHKRIIVK 291
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+L Y+DGIE+++EIVIV+TKGEA+ALA+A MT+ TM TCDHGV
Sbjct: 292 DSAVNAICYGAKIMLPGILMYDDGIELNQEIVIVTTKGEAIALAIALMTSPTMTTCDHGV 351
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 352 AAKIKRVIMERDAYPRKWGLGPKA 375
>gi|328789977|ref|XP_397244.4| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Apis
mellifera]
Length = 495
Score = 239 bits (611), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSG+QSE DG+VT+HDI DA +LY+ H DES LRRVI+PLE LL+ HKRII+K
Sbjct: 232 MQELRRNRSGVQSENDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLINHKRIIVK 291
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+L Y+DGIE+++EIVIV+TKGEA+ALA+A MT+ TM TCDHGV
Sbjct: 292 DSAVNAICYGAKIMLPGILMYDDGIELNQEIVIVTTKGEAIALAIALMTSPTMTTCDHGV 351
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 352 AAKIKRVIMERDAYPRKWGLGPKA 375
>gi|340711128|ref|XP_003394132.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4-like [Bombus terrestris]
Length = 517
Score = 238 bits (608), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSG+QSE DG+VT+HDI DA +LY+ H DES LRRVI+PLE LLV HKRII+K
Sbjct: 232 MQELRRNRSGVQSENDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLVNHKRIIVK 291
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+L Y+DGIE+++EIVIV+TKGEAVALA+A MT+ TM CDHGV
Sbjct: 292 DSAVNAICYGAKIMLPGILMYDDGIELNQEIVIVTTKGEAVALAIALMTSPTMTACDHGV 351
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 352 AAKIKRVIMERDAYPRKWGLGPKA 375
>gi|350405648|ref|XP_003487505.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Bombus
impatiens]
Length = 517
Score = 238 bits (607), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSG+QSE DG+VT+HDI DA +LY+ H DES LRRVI+PLE LLV HKRII+K
Sbjct: 232 MQELRRNRSGVQSENDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLVNHKRIIVK 291
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+L Y+DGIE+++EIVIV+TKGEA+ALA+A MT+ TM CDHGV
Sbjct: 292 DSAVNAICYGAKIMLPGILMYDDGIELNQEIVIVTTKGEAIALAIALMTSPTMTACDHGV 351
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 352 AAKIKRVIMERDAYPRKWGLGPKA 375
>gi|383852398|ref|XP_003701715.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Megachile rotundata]
Length = 515
Score = 237 bits (604), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/144 (74%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSG+QSE+DG+VT+HDI DA +LY+ H DES LRRVI+PLE LLV HKRII+K
Sbjct: 231 MQELRRNRSGVQSEKDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLVNHKRIIVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+L Y+DGIE+++EIVIV+TKGEA+AL +A MT+ TM CDHGV
Sbjct: 291 DSAVNAICYGAKIMLPGILMYDDGIELNQEIVIVTTKGEAIALGVALMTSPTMTACDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPK+
Sbjct: 351 AAKIKRVIMERDAYPRKWGLGPKA 374
>gi|405975700|gb|EKC40249.1| H/ACA ribonucleoprotein complex subunit 4 [Crassostrea gigas]
Length = 498
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/142 (76%), Positives = 126/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ L T+HD+ DA + YD HKDES LRRV+ PLE LL HKRII+K
Sbjct: 234 MQELRRVRSGIMSEKSQLYTMHDVMDAQWTYDHHKDESYLRRVVNPLEALLTSHKRIIMK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNAVCYGA+IMLPGVLRYEDGIE+++EIVIV+TKGEAVALA+AQMTT+ MATCDHG+
Sbjct: 294 DTAVNAVCYGAKIMLPGVLRYEDGIEVNDEIVIVTTKGEAVALAIAQMTTAVMATCDHGI 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+M+RDTYPRKWGLGP
Sbjct: 354 VAKIKRVVMERDTYPRKWGLGP 375
>gi|322796794|gb|EFZ19221.1| hypothetical protein SINV_10049 [Solenopsis invicta]
Length = 497
Score = 236 bits (601), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 130/144 (90%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+RSG+QSE DG+VT+HDI DA +LY+ H DES LRRVI+PLE LL+ HKRII+K
Sbjct: 228 MQELRRSRSGVQSENDGMVTMHDILDAQWLYENHGDESYLRRVIKPLEALLLNHKRIIIK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVL Y+ GIE++EEIVIV+TKGEAVALA+A M++ TMA CDHGV
Sbjct: 288 DSAVNAICYGAKIMLPGVLMYDQGIELNEEIVIVTTKGEAVALAVALMSSPTMAACDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRVIM+RD+YPRKWGLGPK+
Sbjct: 348 VAKLKRVIMERDSYPRKWGLGPKA 371
>gi|260825213|ref|XP_002607561.1| hypothetical protein BRAFLDRAFT_71433 [Branchiostoma floridae]
gi|229292909|gb|EEN63571.1| hypothetical protein BRAFLDRAFT_71433 [Branchiostoma floridae]
Length = 470
Score = 235 bits (600), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 109/144 (75%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE++G+VT+HD+ DA +++D KDES LRRVIRPLE LL HKRI+LK
Sbjct: 242 MQELRRVRSGIMSEKEGMVTMHDVLDAQWMHDNQKDESYLRRVIRPLEALLTSHKRIVLK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLR+EDGIE +EEIV+++TKGEAV L +A MTT+TMATCDHG+
Sbjct: 302 DSAVNAVCYGAKIMLPGVLRFEDGIEQNEEIVVMTTKGEAVCLGIALMTTATMATCDHGI 361
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 362 VAKIKRVIMERDTYPRKWGLGPKA 385
>gi|193676464|ref|XP_001951759.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Acyrthosiphon pisum]
Length = 476
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 130/142 (91%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRRNRSGI SEE+GL TLHD+ DA ++Y+ +KDES LRRV+RPLEG+L +KR+ +K
Sbjct: 243 MIELRRNRSGITSEEEGLATLHDVLDAQWMYENNKDESYLRRVVRPLEGILTNYKRVFVK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA+IMLPG+LRY+DGIE++ EIVIVS+KGEAVAL +A MTT+T+++CDHG+
Sbjct: 303 DSAINAICYGAKIMLPGLLRYDDGIELNMEIVIVSSKGEAVALGVALMTTATISSCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
+AKIKRV+MDRDTYPRKWGLGP
Sbjct: 363 IAKIKRVLMDRDTYPRKWGLGP 384
>gi|324520216|gb|ADY47585.1| H/ACA ribonucleoprotein complex subunit 4 [Ascaris suum]
Length = 240
Score = 234 bits (598), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/144 (77%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D LVT+HDI DA YLYD H DES LRRVIRPLE LLV HKRII+K
Sbjct: 19 MQELRRVRSGITGEKDQLVTMHDILDAQYLYDHHNDESYLRRVIRPLEALLVAHKRIIVK 78
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPG+LR+EDGIE++EEIV+V+TKGEA+ +ALAQMTTSTMA DHGV
Sbjct: 79 DSAVNAICYGAKILLPGILRFEDGIELNEEIVVVTTKGEAICIALAQMTTSTMAITDHGV 138
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTY RKWGLGP S
Sbjct: 139 VAKIKRVIMERDTYARKWGLGPVS 162
>gi|328716300|ref|XP_001948470.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Acyrthosiphon pisum]
Length = 478
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 102/142 (71%), Positives = 130/142 (91%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRRNRSGI SEE+GL TLHD+ DA ++++ +KDES LRRV+RPLEG+L +KR+ +K
Sbjct: 243 MIELRRNRSGITSEEEGLATLHDVLDAQWIFENNKDESYLRRVVRPLEGILTNYKRVFVK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA+IMLPG+LRY+DGIE++ EIVIVS+KGEAVAL +A MTT+T+++CDHG+
Sbjct: 303 DSAINAICYGAKIMLPGLLRYDDGIELNMEIVIVSSKGEAVALGVALMTTATISSCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
+AKIKRV+MDRDTYPRKWGLGP
Sbjct: 363 IAKIKRVLMDRDTYPRKWGLGP 384
>gi|443722429|gb|ELU11298.1| hypothetical protein CAPTEDRAFT_226101 [Capitella teleta]
Length = 507
Score = 233 bits (595), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 105/142 (73%), Positives = 128/142 (90%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D + T+HD+ DA +LYD H+DE+ LRRVI PLE LLV HKRII+K
Sbjct: 237 MQELRRVRSGVLSEKDAMSTMHDVMDAQWLYDHHQDEAYLRRVISPLEALLVSHKRIIMK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NAVCYGA++MLPGVLRY+DGIE+D+EIVIV+TKGEAVA+A+AQMT++ +ATCDHG
Sbjct: 297 DSAINAVCYGAKVMLPGVLRYDDGIEIDDEIVIVTTKGEAVAIAVAQMTSAVIATCDHGQ 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RDTYPRKWGLGP
Sbjct: 357 VAKLKRVIMERDTYPRKWGLGP 378
>gi|74009203|ref|XP_549382.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Canis lupus
familiaris]
Length = 517
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++EEIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNEEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|307172272|gb|EFN63777.1| H/ACA ribonucleoprotein complex subunit 4 [Camponotus floridanus]
Length = 514
Score = 232 bits (591), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 107/144 (74%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+QSE+D +VT+HDI DA +LYD H DES LRRVI+PLE LL+ HKR+ILK
Sbjct: 230 MQELRRIRSGVQSEKDAMVTMHDILDAQWLYDNHGDESYLRRVIKPLEVLLMNHKRVILK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGV+ Y+ GIE+++EIVIV+TKGEAVALA+A MT+ TMA CDHGV
Sbjct: 290 DSAVNAICYGAKIMLPGVIMYDQGIELNQEIVIVTTKGEAVALAIALMTSPTMAACDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD+YPRKWGLGPK+
Sbjct: 350 AAKIKRVIMERDSYPRKWGLGPKA 373
>gi|307209198|gb|EFN86305.1| H/ACA ribonucleoprotein complex subunit 4 [Harpegnathos saltator]
Length = 514
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D +VT+HDI DA +LYD H DES LRRVI+PLE LLV HKRII+K
Sbjct: 230 MQELRRIRSGIQSENDNMVTMHDILDAQWLYDNHGDESYLRRVIKPLETLLVNHKRIIIK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGAQIMLPGVL Y+ IE+++E+VIV+TKGEA+ALA+A MT++TMA CDHG
Sbjct: 290 DSAVNAICYGAQIMLPGVLMYDSHIEINQEVVIVTTKGEAIALAIALMTSATMAACDHGT 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM+RD YPRKWGLGPKS
Sbjct: 350 AAKIKRVIMERDAYPRKWGLGPKS 373
>gi|226955362|gb|ACO95357.1| dyskeratosis congenita 1, dyskerin (predicted) [Dasypus
novemcinctus]
Length = 512
Score = 232 bits (591), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRVI PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVIYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|351712075|gb|EHB14994.1| H/ACA ribonucleoprotein complex subunit 4 [Heterocephalus glaber]
Length = 708
Score = 231 bits (590), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 424 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 483
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 484 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 543
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 544 VAKIKRVIMERDTYPRKWGLGPKA 567
>gi|332022422|gb|EGI62730.1| H/ACA ribonucleoprotein complex subunit 4 [Acromyrmex echinatior]
Length = 517
Score = 231 bits (590), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 106/144 (73%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+RSG+ SE+DG+VT+ DI DA +LYD H DES LRRVIRPLE LL+ HKRII+K
Sbjct: 230 MQELRRSRSGVLSEQDGMVTMQDILDAQWLYDNHGDESYLRRVIRPLESLLINHKRIIIK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVL Y+ GIE++EEIVIV+TKGEAVA+A+A M++ TMA CDHGV
Sbjct: 290 DSAVNAICYGAKIMLPGVLMYDQGIELNEEIVIVTTKGEAVAIAIALMSSPTMAACDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AK+KRVIM+RD+YPRKWGLGPK+
Sbjct: 350 AAKLKRVIMERDSYPRKWGLGPKA 373
>gi|197215692|gb|ACH53081.1| H/ACA ribonucleoprotein complex subunit 4 (predicted) [Otolemur
garnettii]
Length = 523
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRVI PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVIYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|338729701|ref|XP_003365960.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform 2
[Equus caballus]
Length = 522
Score = 231 bits (589), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 245 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 304
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 305 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 364
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 365 VAKIKRVIMERDTYPRKWGLGPKA 388
>gi|335775320|gb|AEH58532.1| H/ACA ribonucleoprotein complex subunit-like protein, partial
[Equus caballus]
Length = 507
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 231 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 291 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 351 VAKIKRVIMERDTYPRKWGLGPKA 374
>gi|157427916|ref|NP_001098865.1| H/ACA ribonucleoprotein complex subunit 4 [Bos taurus]
gi|157278927|gb|AAI34582.1| DKC1 protein [Bos taurus]
gi|296471114|tpg|DAA13229.1| TPA: dyskerin [Bos taurus]
Length = 506
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|149758940|ref|XP_001499071.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform 1
[Equus caballus]
Length = 510
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|281183100|ref|NP_001162280.1| H/ACA ribonucleoprotein complex subunit 4 [Papio anubis]
gi|386781757|ref|NP_001247923.1| H/ACA ribonucleoprotein complex subunit 4 [Macaca mulatta]
gi|160213472|gb|ABX11000.1| dyskeratosis congenita 1, dyskerin (predicted) [Papio anubis]
gi|380810210|gb|AFE76980.1| H/ACA ribonucleoprotein complex subunit 4 isoform 1 [Macaca
mulatta]
gi|383416265|gb|AFH31346.1| H/ACA ribonucleoprotein complex subunit 4 isoform 1 [Macaca
mulatta]
gi|384945618|gb|AFI36414.1| H/ACA ribonucleoprotein complex subunit 4 isoform 1 [Macaca
mulatta]
Length = 514
Score = 231 bits (589), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|2737894|gb|AAB94299.1| Cbf5p homolog [Homo sapiens]
Length = 514
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|397477294|ref|XP_003810008.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Pan paniscus]
Length = 514
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|238815023|gb|ACR56708.1| dyskeratosis congenita 1 [Ovis aries]
Length = 506
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|170649648|gb|ACB21235.1| dyskeratosis congenita 1, dyskerin (predicted) [Callicebus moloch]
Length = 515
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|5542014|emb|CAB51168.1| dyskerin [Homo sapiens]
Length = 524
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|195996317|ref|XP_002108027.1| hypothetical protein TRIADDRAFT_19124 [Trichoplax adhaerens]
gi|190588803|gb|EDV28825.1| hypothetical protein TRIADDRAFT_19124, partial [Trichoplax
adhaerens]
Length = 487
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 105/142 (73%), Positives = 126/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+DG+VT+HD+ DA ++YD KDES LRRVI+PLE LL HKR+++K
Sbjct: 215 MQELRRVRSGIQSEQDGMVTMHDVLDAQWVYDNSKDESYLRRVIKPLEALLTSHKRLVVK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE++ E+VI+STKGEAVAL +A MTT+ MATCDHG
Sbjct: 275 DSAVNAICYGAKLMIPGLLRYESGIEVNSEVVIMSTKGEAVALGIALMTTAVMATCDHGS 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIMDRDTYPRKWGLGP
Sbjct: 335 VAKIKRVIMDRDTYPRKWGLGP 356
>gi|403306934|ref|XP_003943972.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Saimiri
boliviensis boliviensis]
Length = 515
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|217416474|ref|NP_001136140.1| H/ACA ribonucleoprotein complex subunit 4 [Sus scrofa]
gi|213688833|gb|ACJ53932.1| dyskeratosis congenita 1 [Sus scrofa]
Length = 522
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 244 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 304 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAVALMTTAVISTCDHGV 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 364 VAKIKRVIMERDTYPRKWGLGPKA 387
>gi|440902919|gb|ELR53649.1| H/ACA ribonucleoprotein complex subunit 4, partial [Bos grunniens
mutus]
Length = 501
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 238 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|4503337|ref|NP_001354.1| H/ACA ribonucleoprotein complex subunit 4 isoform 1 [Homo sapiens]
gi|426398017|ref|XP_004065199.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Gorilla
gorilla gorilla]
gi|3913488|sp|O60832.3|DKC1_HUMAN RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=CBF5 homolog; AltName: Full=Dyskerin; AltName:
Full=Nopp140-associated protein of 57 kDa; AltName:
Full=Nucleolar protein NAP57; AltName: Full=Nucleolar
protein family A member 4; AltName: Full=snoRNP protein
DKC1
gi|3135028|emb|CAA11970.1| dyskerin [Homo sapiens]
gi|3873221|gb|AAD11815.1| dyskerin [Homo sapiens]
gi|4416165|gb|AAD20232.1| dyskerin [Homo sapiens]
gi|14603090|gb|AAH10015.1| Dyskeratosis congenita 1, dyskerin [Homo sapiens]
gi|117644412|emb|CAL37701.1| hypothetical protein [synthetic construct]
gi|117646788|emb|CAL37509.1| hypothetical protein [synthetic construct]
gi|119593068|gb|EAW72662.1| dyskeratosis congenita 1, dyskerin, isoform CRA_b [Homo sapiens]
gi|306921545|dbj|BAJ17852.1| dyskeratosis congenita 1, dyskerin [synthetic construct]
gi|410221700|gb|JAA08069.1| dyskeratosis congenita 1, dyskerin [Pan troglodytes]
gi|410256254|gb|JAA16094.1| dyskeratosis congenita 1, dyskerin [Pan troglodytes]
gi|410308136|gb|JAA32668.1| dyskeratosis congenita 1, dyskerin [Pan troglodytes]
gi|410330037|gb|JAA33965.1| dyskeratosis congenita 1, dyskerin [Pan troglodytes]
Length = 514
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|301791932|ref|XP_002930934.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Ailuropoda melanoleuca]
Length = 507
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|167045833|gb|ABZ10501.1| dyskeratosis congenita 1, dyskerin (predicted) [Callithrix jacchus]
Length = 515
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|395861029|ref|XP_003802796.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Otolemur
garnettii]
Length = 513
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRVI PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVIYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|215599015|ref|NP_001135935.1| H/ACA ribonucleoprotein complex subunit 4 isoform 2 [Homo sapiens]
Length = 509
Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|395754664|ref|XP_002832372.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Pongo abelii]
Length = 520
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 249 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 308
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 309 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 368
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 369 VAKIKRVIMERDTYPRKWGLGPKA 392
>gi|355757840|gb|EHH61365.1| hypothetical protein EGM_19364, partial [Macaca fascicularis]
Length = 503
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 238 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|348552726|ref|XP_003462178.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Cavia
porcellus]
Length = 513
Score = 231 bits (588), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|417411242|gb|JAA52066.1| Putative pseudouridine synthase, partial [Desmodus rotundus]
Length = 503
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 242 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 302 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICIAVALMTTAVISTCDHGV 361
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 362 VAKIKRVIMERDTYPRKWGLGPKA 385
>gi|291411966|ref|XP_002722254.1| PREDICTED: dyskerin [Oryctolagus cuniculus]
Length = 512
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|332260599|ref|XP_003279372.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Nomascus
leucogenys]
Length = 514
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|119593067|gb|EAW72661.1| dyskeratosis congenita 1, dyskerin, isoform CRA_a [Homo sapiens]
Length = 321
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 40 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 99
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 100 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 159
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 160 VAKIKRVIMERDTYPRKWGLGPKA 183
>gi|119593069|gb|EAW72663.1| dyskeratosis congenita 1, dyskerin, isoform CRA_c [Homo sapiens]
Length = 311
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 40 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 99
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 100 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 159
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 160 VAKIKRVIMERDTYPRKWGLGPKA 183
>gi|217916954|gb|ACK44288.2| dyskerin (predicted) [Oryctolagus cuniculus]
Length = 440
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 237 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 297 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 357 VAKIKRVIMERDTYPRKWGLGPKA 380
>gi|417402069|gb|JAA47893.1| Putative pseudouridine synthase [Desmodus rotundus]
Length = 509
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICIAVALMTTAVISTCDHGV 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|354490287|ref|XP_003507290.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Cricetulus
griseus]
gi|344236019|gb|EGV92122.1| H/ACA ribonucleoprotein complex subunit 4 [Cricetulus griseus]
Length = 513
Score = 230 bits (587), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|323434335|gb|ADX66370.1| dyskeratosis congenita 1 isoform 3 [Homo sapiens]
Length = 420
Score = 230 bits (586), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|198435753|ref|XP_002131872.1| PREDICTED: dyskerin [Ciona intestinalis]
Length = 627
Score = 230 bits (586), Expect = 2e-58, Method: Composition-based stats.
Identities = 108/144 (75%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE D LVT+HD+ DA Y D HKDE+ LRRVI PLE LLV HKRIILK
Sbjct: 329 MQELRRVRSGIMSENDDLVTMHDVLDAQYQLDHHKDETHLRRVISPLEKLLVSHKRIILK 388
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPGVLRYEDGIE+++EIVI++TKGEA+ LA+A MTT+ ++TCDHG+
Sbjct: 389 DSAVNAICYGAKILLPGVLRYEDGIEVNQEIVIITTKGEAICLAIALMTTAVISTCDHGI 448
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 449 VAKIKRVIMERDTYPRKWGLGPKA 472
>gi|281347051|gb|EFB22635.1| hypothetical protein PANDA_021575 [Ailuropoda melanoleuca]
Length = 391
Score = 230 bits (586), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 215 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 275 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 335 VAKIKRVIMERDTYPRKWGLGPKA 358
>gi|215983076|ref|NP_001135985.1| H/ACA ribonucleoprotein complex subunit 4 [Ovis aries]
gi|213688835|gb|ACJ53933.1| dyskeratosis congenita 1 [Ovis aries]
Length = 506
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKI+RVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIRRVIMERDTYPRKWGLGPKA 386
>gi|355705303|gb|EHH31228.1| hypothetical protein EGK_21116 [Macaca mulatta]
Length = 597
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 326 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 385
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 386 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 445
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 446 VAKIKRVIMERDTYPRKWGLGPKA 469
>gi|410989737|ref|XP_004001115.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Felis catus]
Length = 645
Score = 229 bits (585), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 371 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 430
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 431 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 490
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 491 VAKIKRVIMERDTYPRKWGLGPKA 514
>gi|14602859|gb|AAH09928.1| Dyskeratosis congenita 1, dyskerin [Homo sapiens]
gi|123984635|gb|ABM83663.1| dyskeratosis congenita 1, dyskerin [synthetic construct]
gi|123998617|gb|ABM86910.1| dyskeratosis congenita 1, dyskerin [synthetic construct]
Length = 514
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRR + PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRFVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|431897753|gb|ELK06652.1| H/ACA ribonucleoprotein complex subunit 4 [Pteropus alecto]
Length = 593
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 336 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 395
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++E+V+++TKGEAV +A+A MTT+ ++TCDHG+
Sbjct: 396 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEVVVITTKGEAVCIAIALMTTAVISTCDHGI 455
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 456 VAKIKRVIMERDTYPRKWGLGPKA 479
>gi|346471023|gb|AEO35356.1| hypothetical protein [Amblyomma maculatum]
Length = 490
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQ E G+VTLHD+ DA +LY+ H+DE LRRVI+PLE LLV HKR+++K
Sbjct: 239 MEELRRVRSGIQDETSGMVTLHDVLDAQWLYENHRDEEYLRRVIQPLERLLVSHKRVVMK 298
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPGVLRYEDGIE++EE+V+++TKGEA+ + +A M+TST++TCDHG+
Sbjct: 299 DSAVNAVCYGAKVMLPGVLRYEDGIELNEEVVVITTKGEAICIGIALMSTSTISTCDHGI 358
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+M+RDTYPRKWGLGP +
Sbjct: 359 VAKIKRVVMERDTYPRKWGLGPNA 382
>gi|71534070|gb|AAH99966.1| Dkc1 protein [Mus musculus]
Length = 509
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|74141624|dbj|BAE38575.1| unnamed protein product [Mus musculus]
Length = 509
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|74204437|dbj|BAE39967.1| unnamed protein product [Mus musculus]
Length = 509
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|91064867|ref|NP_001025478.1| H/ACA ribonucleoprotein complex subunit 4 [Mus musculus]
gi|341940643|sp|Q9ESX5.4|DKC1_MOUSE RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Dyskerin; AltName: Full=Nopp140-associated protein
of 57 kDa; AltName: Full=Nucleolar protein NAP57;
AltName: Full=Nucleolar protein family A member 4;
AltName: Full=snoRNP protein DKC1
gi|74201907|dbj|BAE22970.1| unnamed protein product [Mus musculus]
Length = 509
Score = 229 bits (584), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|9931991|emb|CAC04528.1| DYSKERIN [Mus musculus]
Length = 509
Score = 229 bits (583), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|344306159|ref|XP_003421756.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Loxodonta africana]
Length = 604
Score = 229 bits (583), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRVI PLE LL HKR+++K
Sbjct: 336 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVIYPLEKLLTSHKRLVMK 395
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 396 DSAVNAICYGAKILLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 455
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 456 VAKIKRVIMERDTYPRKWGLGPKA 479
>gi|170591298|ref|XP_001900407.1| Nucleolar protein K01G5.5 [Brugia malayi]
gi|158592019|gb|EDP30621.1| Nucleolar protein K01G5.5, putative [Brugia malayi]
Length = 452
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D L+T+HDI DA YLYD H D+S LRRVIRPLE LLVGHKRI++K
Sbjct: 231 MQELRRVRSGIFGEKDNLMTMHDILDAQYLYDHHNDDSYLRRVIRPLESLLVGHKRIVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPG+LR+E+GIE++EEIVIV+TKGEA+ LALA MTTSTMA DHGV
Sbjct: 291 DSAVNAICYGAKILLPGILRFENGIELNEEIVIVTTKGEAICLALALMTTSTMAVTDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTY RKW LGP
Sbjct: 351 VAKIKRVIMERDTYARKWCLGP 372
>gi|444510545|gb|ELV09629.1| H/ACA ribonucleoprotein complex subunit 4, partial [Tupaia
chinensis]
Length = 489
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKD+S LRRV+ PLE LL HKR+++K
Sbjct: 209 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDDSYLRRVVYPLEKLLTSHKRLVMK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 269 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 328
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 329 VAKIKRVIMERDTYPRKWGLGPKA 352
>gi|402593687|gb|EJW87614.1| dyskeratosis congenita 1 [Wuchereria bancrofti]
Length = 453
Score = 228 bits (582), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D L+T+HDI DA YLYD H D+S LRRVIRPLE LLVGHKRI++K
Sbjct: 231 MQELRRVRSGIFGEKDNLMTMHDILDAQYLYDHHNDDSYLRRVIRPLESLLVGHKRIVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPG+LR+E+GIE++EEIVIV+TKGEA+ LALA MTTSTMA DHGV
Sbjct: 291 DSAVNAICYGAKILLPGILRFENGIELNEEIVIVTTKGEAICLALALMTTSTMAVTDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTY RKW LGP
Sbjct: 351 VAKIKRVIMERDTYARKWCLGP 372
>gi|390362449|ref|XP_789483.3| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform 3
[Strongylocentrotus purpuratus]
Length = 562
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++ LVT+HD+ DA +++D HKDE LRRVI+P+E LL GHKRI+LK
Sbjct: 236 MAELRRVRSGIQSEKEALVTMHDVLDAQWVHDNHKDEGYLRRVIKPMEALLTGHKRIVLK 295
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VN+VCYGA++MLPGVLR+EDGIEM+ E+V+++TKGEA+AL +A MTTSTMAT DHG+
Sbjct: 296 DSSVNSVCYGAKVMLPGVLRFEDGIEMNSEVVLMTTKGEAIALGIALMTTSTMATVDHGL 355
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K+KRVIM+RD YPRKWGLGPK+
Sbjct: 356 VVKLKRVIMERDVYPRKWGLGPKA 379
>gi|390362447|ref|XP_003730156.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform 1
[Strongylocentrotus purpuratus]
Length = 562
Score = 228 bits (582), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++ LVT+HD+ DA +++D HKDE LRRVI+P+E LL GHKRI+LK
Sbjct: 236 MAELRRVRSGIQSEKEALVTMHDVLDAQWVHDNHKDEGYLRRVIKPMEALLTGHKRIVLK 295
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VN+VCYGA++MLPGVLR+EDGIEM+ E+V+++TKGEA+AL +A MTTSTMAT DHG+
Sbjct: 296 DSSVNSVCYGAKVMLPGVLRFEDGIEMNSEVVLMTTKGEAIALGIALMTTSTMATVDHGL 355
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K+KRVIM+RD YPRKWGLGPK+
Sbjct: 356 VVKLKRVIMERDVYPRKWGLGPKA 379
>gi|390362451|ref|XP_003730157.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 isoform 2
[Strongylocentrotus purpuratus]
Length = 562
Score = 228 bits (581), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++ LVT+HD+ DA +++D HKDE LRRVI+P+E LL GHKRI+LK
Sbjct: 236 MAELRRVRSGIQSEKEALVTMHDVLDAQWVHDNHKDEGYLRRVIKPMEALLTGHKRIVLK 295
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VN+VCYGA++MLPGVLR+EDGIEM+ E+V+++TKGEA+AL +A MTTSTMAT DHG+
Sbjct: 296 DSSVNSVCYGAKVMLPGVLRFEDGIEMNSEVVLMTTKGEAIALGIALMTTSTMATVDHGL 355
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K+KRVIM+RD YPRKWGLGPK+
Sbjct: 356 VVKLKRVIMERDVYPRKWGLGPKA 379
>gi|355684038|gb|AER97272.1| dyskeratosis congenita 1, dyskerin [Mustela putorius furo]
Length = 532
Score = 228 bits (581), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKD+S LRRV+ PLE LL HKR+++K
Sbjct: 268 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDDSYLRRVVYPLEKLLTSHKRLVMK 327
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 328 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 387
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 388 VAKIKRVIMERDTYPRKWGLGPKA 411
>gi|312082773|ref|XP_003143583.1| nucleolar protein [Loa loa]
gi|307761254|gb|EFO20488.1| nucleolar protein [Loa loa]
Length = 453
Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/142 (75%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D L+T+HDI DA YLYD H ++S LRRVIRPLE LLVGHKRI++K
Sbjct: 231 MQELRRVRSGIFGEKDNLMTMHDILDAQYLYDHHNNDSYLRRVIRPLESLLVGHKRIVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPG+LR+E+GIE++EEIVIV+TKGEA+ LALA MTTSTMA DHGV
Sbjct: 291 DSAVNAICYGAKILLPGILRFENGIELNEEIVIVTTKGEAICLALALMTTSTMAVTDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTY RKW LGP
Sbjct: 351 VAKIKRVIMERDTYARKWCLGP 372
>gi|1093316|prf||2103261A nuclear protein NAP57
Length = 466
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA YLYD H+DES LRRV+ PLE LL HKR+++K
Sbjct: 244 MQELRRVRSGVVGERDHMVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++E+V+++TKGEAV +A+A MTT+ ++TCDHGV
Sbjct: 304 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGV 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 364 VAKIKRVIMERDTYPRKWGLGPKA 387
>gi|19173790|ref|NP_596910.1| H/ACA ribonucleoprotein complex subunit 4 [Rattus norvegicus]
gi|2851506|sp|P40615.4|DKC1_RAT RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Dyskerin; AltName: Full=Nopp140-associated protein
of 57 kDa; AltName: Full=Nucleolar protein NAP57;
AltName: Full=Nucleolar protein family A member 4;
AltName: Full=snoRNP protein DKC1
gi|2739325|emb|CAA84402.1| NAP57 [Rattus norvegicus]
gi|71680944|gb|AAH99832.1| Dyskeratosis congenita 1, dyskerin [Rattus norvegicus]
Length = 509
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA YLYD H+DES LRRV+ PLE LL HKR+++K
Sbjct: 244 MQELRRVRSGVVGERDHMVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++E+V+++TKGEAV +A+A MTT+ ++TCDHGV
Sbjct: 304 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGV 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 364 VAKIKRVIMERDTYPRKWGLGPKA 387
>gi|449677683|ref|XP_002154610.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Hydra
magnipapillata]
Length = 492
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 130/144 (90%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE + LVT+HD+ DA +++D KDES LR+V++PLE LL GHKR+++K
Sbjct: 231 MQELRRVRSGIQSENEDLVTMHDVLDAQWVFDNTKDESYLRKVVKPLEKLLTGHKRLVIK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++MLPG+LRYE GI+M+++IV+++TKGEA+A+ +A M+T+T+ATCDHGV
Sbjct: 291 DSAVNAICYGAKLMLPGILRYESGIDMNDDIVMMTTKGEAIAVGIALMSTATIATCDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIMDRDTYPRKWGLGPK+
Sbjct: 351 VAKIKRVIMDRDTYPRKWGLGPKA 374
>gi|167517062|ref|XP_001742872.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779496|gb|EDQ93110.1| predicted protein [Monosiga brevicollis MX1]
Length = 474
Score = 226 bits (576), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+D LVT+HD+ DA ++ D KDE+ LRRVI+PLE LLV HKRI++K
Sbjct: 226 MQELRRVRSGIQSEKDQLVTMHDVLDAQWVMDNQKDETYLRRVIKPLEVLLVQHKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++MLPG+LRY D IE+DEE+V+++TKGEA+A+ +AQMTT+ MATCDHGV
Sbjct: 286 DSAVNAICYGAKLMLPGLLRYADNIEVDEEVVLITTKGEAIAVGIAQMTTAVMATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPR+WGLGP++
Sbjct: 346 VAKIKRVIMERDVYPRQWGLGPRA 369
>gi|301619755|ref|XP_002939254.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Xenopus
(Silurana) tropicalis]
Length = 555
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 240 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 300 DSAVNAICYGAKIMLPGLLRYEDGIELNQEIVVITTKGEAICIAVALMTTAVISTCDHGV 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 360 VAKIKRVIMERDTYPRKWGLGPKA 383
>gi|345328464|ref|XP_001514686.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4
[Ornithorhynchus anatinus]
Length = 598
Score = 225 bits (574), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + YD +KDES LRRVI PLE LL HKR+++K
Sbjct: 324 MQELRRVRSGVMGEKDHMVTMHDVLDAQWQYDNNKDESYLRRVIYPLEKLLTSHKRLVMK 383
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 384 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 443
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 444 VAKIKRVIMERDTYPRKWGLGPKA 467
>gi|149029848|gb|EDL84960.1| dyskeratosis congenita 1, dyskerin, isoform CRA_a [Rattus
norvegicus]
Length = 266
Score = 225 bits (574), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA YLYD H+DES LRRV+ PLE LL HKR+++K
Sbjct: 1 MQELRRVRSGVVGERDHMVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMK 60
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++E+V+++TKGEAV +A+A MTT+ ++TCDHGV
Sbjct: 61 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGV 120
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 121 VAKIKRVIMERDTYPRKWGLGPKA 144
>gi|449499294|ref|XP_004176533.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4 [Taeniopygia guttata]
Length = 475
Score = 225 bits (573), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKR+++K
Sbjct: 201 MQELRRVRSGILGETDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMK 260
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ LA+A MTT+ ++TCDHGV
Sbjct: 261 DSAVNAICYGAKIMLPGVLRYEDGIELNQEIVVITTKGEAICLAIALMTTAVISTCDHGV 320
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 321 VAKIKRVIMERDTYPRKWGLGPKA 344
>gi|165970590|gb|AAI58494.1| LOC100145077 protein [Xenopus (Silurana) tropicalis]
Length = 502
Score = 225 bits (573), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 128/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 240 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 300 DSAVNAICYGAKIMLPGLLRYEDGIELNQEIVVITTKGEAICIAVALMTTAVISTCDHGV 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 360 VAKIKRVIMERDTYPRKWGLGPKA 383
>gi|213511644|ref|NP_001133521.1| dyskerin [Salmo salar]
gi|209154338|gb|ACI33401.1| H/ACA ribonucleoprotein complex subunit 4 [Salmo salar]
Length = 522
Score = 224 bits (571), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D LVT+HD+ DA + YD +KDE+ LRRVI PLE LLV HKR+++K
Sbjct: 241 MQELRRVRSGVLGERDNLVTMHDVLDAQWQYDHNKDETYLRRVIYPLEKLLVSHKRLVMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIEM+++IV+++TKGEA+ +A A MTT+ ++TCDHGV
Sbjct: 301 DSAVNAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICIATALMTTAVISTCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|326918816|ref|XP_003205682.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Meleagris gallopavo]
Length = 489
Score = 224 bits (571), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKR+++K
Sbjct: 214 MQELRRVRSGILGEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ LA+A MTT+ ++TCDHGV
Sbjct: 274 DSAVNAICYGAKIMLPGVLRYEDGIELNQEIVVITTKGEAICLAIALMTTAVISTCDHGV 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 334 VAKIKRVIMERDTYPRKWGLGPKA 357
>gi|384499832|gb|EIE90323.1| H/ACA ribonucleoprotein complex subunit 4 [Rhizopus delemar RA
99-880]
Length = 469
Score = 224 bits (570), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD KDES LRRVIRPLE LL +KR+++K
Sbjct: 212 MQELRRVRSGTTSENDDIVTMHDVLDAQWLYDNTKDESYLRRVIRPLESLLTNYKRVVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E GIE+++EIV+++TKGEA+ALA AQMTT+ MATCDHGV
Sbjct: 272 DSAVNAICYGAKLMVPGLLRFESGIEVNDEIVLMTTKGEAIALAYAQMTTAVMATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRVIMERDTYPRRWGLGP 353
>gi|71895397|ref|NP_001026286.1| H/ACA ribonucleoprotein complex subunit 4 [Gallus gallus]
gi|67460227|sp|Q5ZJH9.1|DKC1_CHICK RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Dyskerin
gi|53133570|emb|CAG32114.1| hypothetical protein RCJMB04_17p9 [Gallus gallus]
Length = 516
Score = 223 bits (568), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 102/144 (70%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKR+++K
Sbjct: 241 MQELRRVRSGILGEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+ +EIV+++TKGEA+ LA+A MTT+ ++TCDHGV
Sbjct: 301 DSAVNAICYGAKIMLPGVLRYEDGIELKQEIVVITTKGEAICLAIALMTTAVISTCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>gi|156395724|ref|XP_001637260.1| predicted protein [Nematostella vectensis]
gi|156224371|gb|EDO45197.1| predicted protein [Nematostella vectensis]
Length = 392
Score = 223 bits (567), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D + T+HD+ DA ++YD KDE+ LRR I+PLE LL HKR+++K
Sbjct: 215 MQELRRVRSGIQSENDNMATMHDVLDAQWVYDNSKDETYLRRCIKPLEALLTSHKRLVVK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE++E+IVI++TKGEA+AL +A MTT+ MA CDHG+
Sbjct: 275 DSAVNAICYGAKLMIPGLLRYESGIEINEQIVIMTTKGEAIALGIALMTTAVMAACDHGI 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 335 VAKIKRVIMERDTYPRKWGLGPKA 358
>gi|348545585|ref|XP_003460260.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Oreochromis
niloticus]
Length = 500
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 238 MQELRRVRSGVMGEKDNLVTMHDVLDAQWQFDHNKDESYLRRVIFPLEKLLVSHKRLVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHGV
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|168053355|ref|XP_001779102.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669462|gb|EDQ56048.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 544
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D LVT+HD+ DA ++YD HKDES LRRVI PLE LL +KR ++K
Sbjct: 247 MQELRRVRSGILGEKDNLVTMHDVLDAQWVYDNHKDESYLRRVIMPLEVLLTSYKRCVVK 306
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+AL +AQMTT+ MATCDHGV
Sbjct: 307 DSAVNAICYGAKLMIPGLLRYEQGIEVGEEVVLMTTKGEAIALGIAQMTTAVMATCDHGV 366
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPRKWGLGP++
Sbjct: 367 VAKVKRVVMERDTYPRKWGLGPRA 390
>gi|116063374|gb|AAI23285.1| LOC733436 protein [Xenopus laevis]
Length = 450
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 240 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 300 DSAVNAICYGAKIMLPGLLRYEDGIELNQEIVVITTKGEAICIAIALMTTAVISTCDHGI 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 360 VAKIKRVIMERDIYPRKWGLGPKA 383
>gi|122936359|gb|AAI30043.1| LOC733436 protein [Xenopus laevis]
Length = 474
Score = 223 bits (567), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 240 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 300 DSAVNAICYGAKIMLPGLLRYEDGIELNQEIVVITTKGEAICIAIALMTTAVISTCDHGI 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 360 VAKIKRVIMERDIYPRKWGLGPKA 383
>gi|83318359|gb|AAI08889.1| LOC733436 protein [Xenopus laevis]
Length = 510
Score = 222 bits (566), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 240 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDNNKDESYLRRVIFPLEKLLVSHKRLVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 300 DSAVNAICYGAKIMLPGLLRYEDGIELNQEIVVITTKGEAICIAIALMTTAVISTCDHGI 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YPRKWGLGPK+
Sbjct: 360 VAKIKRVIMERDIYPRKWGLGPKA 383
>gi|168053405|ref|XP_001779127.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669487|gb|EDQ56073.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 475
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D LVT+HD+ DA ++YD HKDES LRRVI PLE LL +KR ++K
Sbjct: 247 MQELRRVRSGILGEKDNLVTMHDVLDAQWVYDNHKDESYLRRVIMPLEVLLTSYKRCVVK 306
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+AL +AQMTT+ MATCDHGV
Sbjct: 307 DSAVNAICYGAKLMIPGLLRYEQGIEVGEEVVLMTTKGEAIALGIAQMTTAVMATCDHGV 366
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPRKWGLGP++
Sbjct: 367 VAKVKRVVMERDTYPRKWGLGPRA 390
>gi|225007597|ref|NP_001028279.2| dyskerin [Danio rerio]
Length = 506
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDE+ LRRVI PLE LL+ HKRI++K
Sbjct: 238 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLISHKRIVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHGV
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|28839578|gb|AAH47840.1| Dkc1 protein [Danio rerio]
Length = 497
Score = 222 bits (565), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDE+ LRRVI PLE LL+ HKRI++K
Sbjct: 238 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLISHKRIVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHGV
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|326437286|gb|EGD82856.1| centromere/microtubule-binding protein cbf5 [Salpingoeca sp. ATCC
50818]
Length = 495
Score = 221 bits (564), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D LVT+HD+ DA + Y+ +D++ LRRVI+PLE LL GHKR+++K
Sbjct: 220 MQELRRVRSGIQSEADNLVTMHDVLDAQWHYENTRDQTYLRRVIQPLEILLTGHKRVVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRY DGIE+DEE VI++TKGEAVA+ +A MTT+ MATCDHGV
Sbjct: 280 DSAVNAICYGAKLMIPGLLRYADGIEIDEECVILTTKGEAVAVGIACMTTAVMATCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPR+WGLGP++
Sbjct: 340 VAKIKRVIMERDTYPRQWGLGPRA 363
>gi|395547747|ref|XP_003775182.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Sarcophilus
harrisii]
Length = 592
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + YD +KDE LRRVI PLE LL HKR+++K
Sbjct: 243 MQELRRIRSGVMGEKDHMVTMHDVLDAQWQYDNYKDEGYLRRVIYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++E+V+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEVVVITTKGEAICVAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|334350049|ref|XP_001374865.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Monodelphis domestica]
Length = 575
Score = 221 bits (562), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + YD +KDE LRRVI PLE LL HKR+++K
Sbjct: 243 MQELRRIRSGVMGEKDHMVTMHDVLDAQWQYDNYKDEGYLRRVIYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++E+V+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEVVVITTKGEAICVAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>gi|427789457|gb|JAA60180.1| Putative h/aca ribonucleoprotein complex subunit 4 [Rhipicephalus
pulchellus]
Length = 476
Score = 221 bits (562), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQ E +VT+HD+ DA ++++ ++E LRR I+PLE LLV HKRI++K
Sbjct: 240 MEELRRVRSGIQDENSNMVTMHDVLDAQWMFENDRNEEYLRRAIQPLERLLVSHKRIVMK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPGVLRYEDGIE++EE+V+++TKGEA+ L +A M+TST+ATCDHG+
Sbjct: 300 DSAVNAVCYGAKVMLPGVLRYEDGIEINEEVVVITTKGEAICLGIALMSTSTIATCDHGI 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+M+RDTYPRKWGLGP +
Sbjct: 360 VAKIKRVVMERDTYPRKWGLGPNA 383
>gi|50552986|ref|XP_503903.1| YALI0E13486p [Yarrowia lipolytica]
gi|49649772|emb|CAG79496.1| YALI0E13486p [Yarrowia lipolytica CLIB122]
Length = 485
Score = 220 bits (561), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VTLHDI DA +LYD KDES LRR IRPLE LL+G+KRI++K
Sbjct: 218 MQELRRVRSGALDESDGMVTLHDILDAQWLYDNTKDESYLRRCIRPLESLLLGYKRIVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN++CYGA++MLPGVLRYE+GIE+++EIV+++TKGEA+AL +AQMTT +A+CDHGV
Sbjct: 278 DSAVNSICYGAKLMLPGVLRYEEGIELEDEIVLITTKGEAIALGIAQMTTVDLASCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
V++IKR IM+RDTYPR+WGLGP
Sbjct: 338 VSRIKRCIMERDTYPRRWGLGP 359
>gi|327277364|ref|XP_003223435.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Anolis
carolinensis]
Length = 579
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + YD +KDE+ LRRVI PLE LL+ HKR+++K
Sbjct: 305 MQELRRVRSGVMGEKDHMVTMHDVLDAQWQYDHNKDETYLRRVIYPLEKLLISHKRLVMK 364
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHG+
Sbjct: 365 DSAVNAICYGAKIMLPGLLRYEDGIEINQDIVVITTKGEAICTAIALMTTAVISTCDHGI 424
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 425 VAKIKRVIMERDTYPRKWGLGPKA 448
>gi|449017533|dbj|BAM80935.1| box H/ACA snoRNP rRNA pseudouridine syntase component dyskerin
[Cyanidioschyzon merolae strain 10D]
Length = 425
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 101/142 (71%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE DG+VT+HD+ DA +L+D KDES LRRVI+PLE LLV HKRI++K
Sbjct: 228 MQELRRVRSGVHSEYDGMVTMHDVLDAQWLFDTTKDESYLRRVIKPLESLLVHHKRIVIK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNAVCYGA++MLPGVLRYE+ IE EE+VI++TKGEAVALA+A M+TS +A+CDHGV
Sbjct: 288 DSCVNAVCYGAKLMLPGVLRYENDIECGEEVVIMTTKGEAVALAIAHMSTSEIASCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+IKRV+M+RD YPR+WGLGP
Sbjct: 348 VARIKRVVMERDLYPRRWGLGP 369
>gi|410898744|ref|XP_003962857.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Takifugu
rubripes]
Length = 497
Score = 220 bits (560), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + +D +KDES LRRVI PLE LLV +KR+++K
Sbjct: 237 MQELRRVRSGVLGEKDNMVTMHDVLDAQWQFDHNKDESYLRRVIFPLEKLLVSYKRLVMK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHG+
Sbjct: 297 DSAVNAICYGAKIMLPGVLRYEDGIELNQDIVVITTKGEAICTAVALMTTAVISTCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 357 VAKIKRVIMERDTYPRKWGLGPKA 380
>gi|393218369|gb|EJD03857.1| putative rRNA pseudouridine synthase [Fomitiporia mediterranea
MF3/22]
Length = 525
Score = 219 bits (559), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 226 MQELRRVRSGAMSENDDIVTMHDVMDAQWMYDNTRDESYLRRVIRPLECLLVGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+ I ++EE+V+++TKGEA+AL +AQMTT +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYENDIALNEEVVLMTTKGEAIALGIAQMTTVELATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 346 VAKVKRCIMERDTYPRRWGLGPKA 369
>gi|66812658|ref|XP_640508.1| pseudouridine synthase family protein [Dictyostelium discoideum
AX4]
gi|74855240|sp|Q54T81.1|DKC1_DICDI RecName: Full=Probable H/ACA ribonucleoprotein complex subunit 4
gi|60468522|gb|EAL66526.1| pseudouridine synthase family protein [Dictyostelium discoideum
AX4]
Length = 540
Score = 219 bits (558), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ G VT+HD+KDA Y YD KDES LRRVI+PLE +L +KRI++K
Sbjct: 227 MQELRRVRSGIMSEKKGQVTMHDVKDAQYEYDNSKDESYLRRVIQPLEAILTNYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE IE +EE+V+++TKGEA+A+ +AQMTT++MATCDHGV
Sbjct: 287 DSAINAICYGAKLMIPGLLRYEQDIESNEEVVLITTKGEAIAIGIAQMTTASMATCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRD YP +WGLGPK+
Sbjct: 347 VATIKRVIMDRDVYPVRWGLGPKA 370
>gi|328863728|gb|EGG12827.1| hypothetical protein MELLADRAFT_25274 [Melampsora larici-populina
98AG31]
Length = 398
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VT+HD+ DA ++YD +DES LRRVIRPLE LL G+KRI++K
Sbjct: 209 MQELRRVRSGAMGENDGIVTMHDVLDAQWVYDNTRDESYLRRVIRPLESLLTGYKRIVVK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNAVCYGA++M+PG+LRYE IE++EE+V+++TKGEA+A+ +AQMTT +ATCDHGV
Sbjct: 269 DTAVNAVCYGAKLMIPGLLRYEADIELNEEVVLMTTKGEAIAIGIAQMTTVELATCDHGV 328
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 329 VAKVKRCIMERDTYPRRWGLGPKA 352
>gi|72679805|gb|AAI00011.1| Dyskeratosis congenita 1, dyskerin [Danio rerio]
Length = 507
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDE+ LRRVI PLE LL+ HK I++K
Sbjct: 238 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLISHKGIVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHGV
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|331243848|ref|XP_003334566.1| H/ACA ribonucleoprotein complex subunit 4 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|309313556|gb|EFP90147.1| H/ACA ribonucleoprotein complex subunit 4 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 515
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VT+HD+ DA + YD +DES LRRVIRPLE LL+G+KR+++K
Sbjct: 227 MQELRRVRSGAMGENDGIVTMHDVLDAQWTYDNTRDESYLRRVIRPLESLLIGYKRVVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNAVCYGA++M+PG+LRYE I+++EE+V+++TKGEA+A+ +AQMTT +ATCDHGV
Sbjct: 287 DTAVNAVCYGAKLMIPGLLRYEADIQLNEEVVLMTTKGEAIAIGIAQMTTVELATCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 347 VAKVKRCIMERDTYPRRWGLGPKA 370
>gi|325182641|emb|CCA17096.1| H/ACA ribonucleoprotein complex subunit 4 putative [Albugo
laibachii Nc14]
Length = 467
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+DG+VT+HD+ DA Y YD +KDES LRRV+RPLE LL +KRI++K
Sbjct: 233 MQELRRVRSGAMSEQDGMVTMHDVMDAQYQYDNYKDESYLRRVVRPLEVLLTSYKRIVVK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+ M+PG+LR+ D I++ EE+V+++TKGEA+A+ +AQMTT+ MATCDHGV
Sbjct: 293 DSSVNAICYGAKFMVPGLLRFADDIDIGEEVVLMTTKGEAIAIGIAQMTTAVMATCDHGV 352
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 353 VAKIKRVIMERDTYPRRWGLGP 374
>gi|428176248|gb|EKX45133.1| hypothetical protein GUITHDRAFT_71484 [Guillardia theta CCMP2712]
Length = 468
Score = 219 bits (557), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E D L+T+HD+ DA ++YD +KDES LRRVI PLE LL G+KR+++K
Sbjct: 226 MQELRRVRSGALTEHDNLMTMHDVLDAQWMYDTYKDESYLRRVILPLERLLTGYKRVVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+EDGIE+ EIV+++TKGEA+ L +AQMTT+ MATCDHGV
Sbjct: 286 DSAVNAICYGAKLMIPGLLRFEDGIEIGTEIVMITTKGEAICLGIAQMTTAVMATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPR+WGLGP++
Sbjct: 346 VAKIKRVIMERDTYPRRWGLGPQA 369
>gi|395334191|gb|EJF66567.1| putative rRNA pseudouridine synthase [Dichomitus squalens LYAD-421
SS1]
Length = 518
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LL G+KRI++K
Sbjct: 228 MQELRRVRSGALSENDDMVTMHDVLDAQWVYDNTRDESYLRRVIRPLESLLTGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADISLNEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGPKA 371
>gi|388855280|emb|CCF51174.1| probable CBF5-Centromere Binding Factor / putative rRNA
pseuduridine synthase [Ustilago hordei]
Length = 493
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DES LRRVIRPLE LL G+KRI++K
Sbjct: 225 MQELRRVRSGALSENDSVVTMHDVLDAQWLYDNQRDESYLRRVIRPLESLLTGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE EE+V+++TKGEA+ALA+AQM+T ++TCDHGV
Sbjct: 285 DSAVNAVCYGAKLMIPGLLRYEKDIETHEEVVLMTTKGEAIALAIAQMSTVDLSTCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 345 VAKVKRCIMERDTYPRRWGLGPKA 368
>gi|449550788|gb|EMD41752.1| hypothetical protein CERSUDRAFT_147033 [Ceriporiopsis subvermispora
B]
Length = 525
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DES LRR IRPLE LLVG+KRI++K
Sbjct: 228 MQELRRVRSGALSENDDMVTMHDVLDAQWLYDNTRDESYLRRAIRPLEALLVGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADISVNEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGPKA 371
>gi|19115790|ref|NP_594878.1| pseudouridylate synthase Cbf5 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|3913202|sp|O14007.1|CBF5_SCHPO RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Centromere-binding factor 5 homolog
gi|2239214|emb|CAB10131.1| pseudouridylate synthase Cbf5 (predicted) [Schizosaccharomyces
pombe]
Length = 474
Score = 218 bits (556), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 218 MQELRRVRSGCLSENDDIVTMHDVLDAQWIYDNTRDESYLRRVIRPLESLLVGYKRIVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE++EEIV+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 278 DSAVNAICYGAKLMIPGLLRYEAGIEVNEEIVLITTKGEAIAVGIAQMSTVELSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGP+S
Sbjct: 338 VAKVKRCIMERDVYPRRWGLGPQS 361
>gi|389751571|gb|EIM92644.1| putative rRNA pseudouridine synthase [Stereum hirsutum FP-91666
SS1]
Length = 523
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 100/144 (69%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LL+G+KRI++K
Sbjct: 226 MQELRRVRSGALSENDDMVTMHDVLDAQWMYDNTRDESYLRRVIRPLECLLIGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I + EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYEADISVHEEVVLMTTKGEAIALAIAQMSTVDLATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPR+WGLGPK+
Sbjct: 346 VAKIKRVIMERDTYPRRWGLGPKA 369
>gi|71004332|ref|XP_756832.1| hypothetical protein UM00685.1 [Ustilago maydis 521]
gi|46095634|gb|EAK80867.1| hypothetical protein UM00685.1 [Ustilago maydis 521]
Length = 496
Score = 218 bits (555), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DE+ LRRVIRPLE LL G+KRI++K
Sbjct: 225 MQELRRVRSGALSENDSIVTMHDVLDAQWLYDNQRDETYLRRVIRPLESLLTGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+ALA+AQM+T ++TCDHGV
Sbjct: 285 DSAVNAVCYGAKLMIPGLLRYEKDIEVHEEVVLMTTKGEAIALAIAQMSTVDLSTCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 345 VAKVKRCIMERDTYPRRWGLGPKA 368
>gi|323508236|emb|CBQ68107.1| probable CBF5-Centromere Binding Factor / putative rRNA
pseuduridine synthase [Sporisorium reilianum SRZ2]
Length = 497
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DE+ LRRVIRPLE LL G+KRI++K
Sbjct: 225 MQELRRVRSGALSENDSIVTMHDVLDAQWLYDNQRDETYLRRVIRPLESLLTGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+ALA+AQM+T ++TCDHGV
Sbjct: 285 DSAVNAVCYGAKLMIPGLLRYEKDIEVHEEVVLMTTKGEAIALAIAQMSTVDLSTCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 345 VAKVKRCIMERDTYPRRWGLGPKA 368
>gi|432951236|ref|XP_004084763.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Oryzias
latipes]
Length = 499
Score = 218 bits (555), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + +D +KDE+ LRRVI PLE LLV H+R+++K
Sbjct: 238 MQELRRVRSGVLGEKDNMVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLVSHRRLVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHG
Sbjct: 298 DSSVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGF 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>gi|430813879|emb|CCJ28818.1| unnamed protein product [Pneumocystis jirovecii]
Length = 470
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE DG+VT+HD+ DA + YD +DE LRRVIRPLE LLV +KRI++K
Sbjct: 224 MQELRRVRSGCMSEMDGMVTMHDVLDAQWEYDNTRDEKYLRRVIRPLESLLVSYKRIVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE++EE+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 284 DSAVNAICYGAKLMIPGLLRYESGIEINEEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKR IM+RDTYPR+WGLGP+S
Sbjct: 344 VAKIKRCIMERDTYPRRWGLGPQS 367
>gi|164656497|ref|XP_001729376.1| hypothetical protein MGL_3411 [Malassezia globosa CBS 7966]
gi|159103267|gb|EDP42162.1| hypothetical protein MGL_3411 [Malassezia globosa CBS 7966]
Length = 509
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D +VT+HD+ DA +LYD +DES LR VIRPLE LLVG+KRI++K
Sbjct: 214 MQELRRVRSGALSEDDNMVTMHDVLDAQWLYDNQRDESYLRHVIRPLESLLVGYKRIVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E IE+++E+V+++TKGEA+A+ +AQMTT ++TCDHG+
Sbjct: 274 DSAVNAVCYGAKLMIPGLLRFESNIELNDEVVLITTKGEAIAIGIAQMTTVDLSTCDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 334 VAKVKRCIMERDTYPRRWGLGPKA 357
>gi|393244621|gb|EJD52133.1| putative rRNA pseudouridine synthase [Auricularia delicata
TFB-10046 SS5]
Length = 514
Score = 218 bits (554), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVI+PLE LLVG+KRI++K
Sbjct: 228 MQELRRVRSGALSESDEMVTMHDVLDAQWMYDNTRDESYLRRVIKPLETLLVGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYED I + EE+V+++TKGEA+ALA+AQMTT +ATC HGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEDDIALHEEVVLMTTKGEAIALAIAQMTTVELATCSHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGPKA 371
>gi|443896590|dbj|GAC73934.1| pseudouridine synthase [Pseudozyma antarctica T-34]
Length = 497
Score = 218 bits (554), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 98/144 (68%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DE+ LRRVIRPLE LL G+KRI++K
Sbjct: 225 MQELRRVRSGALSENDSIVTMHDVLDAQWLYDNQRDETYLRRVIRPLESLLTGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+ALA+AQM+T ++TCDHGV
Sbjct: 285 DSAVNAVCYGAKLMIPGLLRYEKDIEVHEEVVLMTTKGEAIALAVAQMSTVDLSTCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 345 VAKVKRCIMERDTYPRRWGLGPKA 368
>gi|426201538|gb|EKV51461.1| hypothetical protein AGABI2DRAFT_182425 [Agaricus bisporus var.
bisporus H97]
Length = 510
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRR +RPLE LLVG+KRI++K
Sbjct: 226 MQELRRVRSGAMSENDDIVTMHDVLDAQWMYDNTRDESYLRRAVRPLESLLVGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EEIV+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYEADISLNEEIVLMTTKGEAIALAIAQMSTVELATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 346 VAKVKRCIMERDTYPRRWGLGP 367
>gi|254582801|ref|XP_002499132.1| ZYRO0E04576p [Zygosaccharomyces rouxii]
gi|186703752|emb|CAQ43442.1| H/ACA ribonucleoprotein complex subunit 4 [Zygosaccharomyces
rouxii]
gi|238942706|emb|CAR30877.1| ZYRO0E04576p [Zygosaccharomyces rouxii]
Length = 498
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/142 (70%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHDI DA ++YD +DES LRRVI+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNLVTLHDILDAQWVYDNTRDESYLRRVIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|409083417|gb|EKM83774.1| hypothetical protein AGABI1DRAFT_66714 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 510
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRR +RPLE LLVG+KRI++K
Sbjct: 226 MQELRRVRSGAMSENDDIVTMHDVLDAQWMYDNTRDESYLRRAVRPLESLLVGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EEIV+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYEADISLNEEIVLMTTKGEAIALAIAQMSTVELATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 346 VAKVKRCIMERDTYPRRWGLGP 367
>gi|392597270|gb|EIW86592.1| putative rRNA pseudouridine synthase [Coniophora puteana RWD-64-598
SS2]
Length = 526
Score = 217 bits (553), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA + YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 227 MQELRRVRSGAMSENDDIVTMHDVLDAQWTYDNTRDESYLRRVIRPLESLLVGYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I +++E+V+++TKGEA+ALA+AQMTT +ATCDHGV
Sbjct: 287 DSAVNAVCYGAKLMIPGLLRYEADISVNDEVVLMTTKGEAIALAIAQMTTVELATCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 347 VAKVKRCIMERDTYPRRWGLGP 368
>gi|330802465|ref|XP_003289237.1| hypothetical protein DICPUDRAFT_35400 [Dictyostelium purpureum]
gi|325080682|gb|EGC34227.1| hypothetical protein DICPUDRAFT_35400 [Dictyostelium purpureum]
Length = 545
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ G+VT+HD+KDA Y +D KDE+ LRRV++PLE +L +KRI++K
Sbjct: 239 MQELRRVRSGIMSEKKGMVTMHDVKDAQYEFDNSKDEAYLRRVVQPLEAILTNYKRIVVK 298
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE IE +EE+V+++TKGEA+A+ +AQMTT++MATCDHGV
Sbjct: 299 DSAINAICYGAKLMIPGLLRYEQDIESNEEVVLITTKGEAIAIGVAQMTTASMATCDHGV 358
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRD YP +WGLGPK+
Sbjct: 359 VATIKRVIMDRDVYPVRWGLGPKA 382
>gi|384246457|gb|EIE19947.1| putative rRNA pseudouridine synthase [Coccomyxa subellipsoidea
C-169]
Length = 392
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D LVT+HDI DA ++YD KDES LRR I PLE +L +KR+++K
Sbjct: 217 MQELRRVRSGIVGEKDNLVTMHDILDAQWVYDNTKDESYLRRAIMPLEAVLTTYKRLVVK 276
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++MLPG+LRYE+GIE+D+E+V+++TKGEA+A+ +AQMTTST+ATCDHG
Sbjct: 277 DSAVNAICYGAKLMLPGLLRYENGIEVDDEVVMITTKGEAIAIGIAQMTTSTIATCDHGC 336
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
AK+KRV+M+RDTYPR+WGLGP
Sbjct: 337 AAKVKRVVMERDTYPRRWGLGP 358
>gi|449267888|gb|EMC78779.1| H/ACA ribonucleoprotein complex subunit 4, partial [Columba livia]
Length = 464
Score = 217 bits (552), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 100/148 (67%), Positives = 126/148 (85%), Gaps = 4/148 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKRI++K
Sbjct: 186 MQELRRVRSGILGEKDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRIVMK 245
Query: 61 DSAV----NAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
DSA NA+CYGA+I+LPGVLRYEDGIE+++EIV+++TKGEA+ LA+A MTT+ ++TC
Sbjct: 246 DSAFIRKKNAICYGAKILLPGVLRYEDGIELNQEIVVITTKGEAICLAIALMTTAVISTC 305
Query: 117 DHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
DHG+VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 306 DHGIVAKIKRVIMERDTYPRKWGLGPKA 333
>gi|392571640|gb|EIW64812.1| putative rRNA pseudouridine synthase [Trametes versicolor FP-101664
SS1]
Length = 520
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DE+ LRRVIRPLE LL+G+KRI++K
Sbjct: 228 MQELRRVRSGALSENDDMVTMHDVLDAQWVYDNTRDETYLRRVIRPLESLLIGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADISLNEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGPKA 371
>gi|313239219|emb|CBY14174.1| unnamed protein product [Oikopleura dioica]
Length = 503
Score = 217 bits (552), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E + T+HDI DA ++Y+ DE+ LR+++ PLE +LV HKRII+K
Sbjct: 220 MQELRRCRSGIMNENELGCTMHDILDAQHVYETTLDETYLRKIVMPLEVILVKHKRIIMK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+IMLPGVLRYEDGIE+D+EIVIV+TKGEA+ +ALAQMTT+ MATCDHGV
Sbjct: 280 DSSVNAICYGAKIMLPGVLRYEDGIEIDQEIVIVTTKGEAICIALAQMTTAVMATCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RD YP+KWGLGPK+
Sbjct: 340 VAKIKRVIMERDVYPKKWGLGPKA 363
>gi|169844228|ref|XP_001828835.1| centromere/microtubule binding protein cbf5 [Coprinopsis cinerea
okayama7#130]
gi|116509947|gb|EAU92842.1| centromere/microtubule binding protein cbf5 [Coprinopsis cinerea
okayama7#130]
Length = 522
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 226 MQELRRVRSGAMSENDDMVTMHDVLDAQWMYDNTRDESYLRRVIRPLESLLVGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYEADIALNEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 346 VAKVKRCIMERDTYPRRWGLGP 367
>gi|295660569|ref|XP_002790841.1| centromere/microtubule-binding protein cbf5 [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281394|gb|EEH36960.1| centromere/microtubule-binding protein cbf5 [Paracoccidioides sp.
'lutzii' Pb01]
Length = 796
Score = 216 bits (551), Expect = 2e-54, Method: Composition-based stats.
Identities = 95/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 528 MQELRRVRSGAMDEMDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 587
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 588 DSAVNAVCYGAKLMIPGLLRFEAGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 647
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 648 VAKVKRCIMERDLYPRKWGLGP 669
>gi|281212633|gb|EFA86793.1| pseudouridine synthase family protein [Polysphondylium pallidum
PN500]
Length = 572
Score = 216 bits (551), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ +VT+HDIKDA Y YD +KDE+ LRRVI+PLE +L +KRI++K
Sbjct: 227 MQELRRVRSGIMSEKSNMVTMHDIKDAQYEYDNNKDETYLRRVIQPLEAVLTNYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE IE++EE+V+++TKGEA+A+ +AQMTT+++++CDHGV
Sbjct: 287 DSAINAICYGAKLMIPGLLRYEQDIEVNEEVVLITTKGEAIAIGIAQMTTASLSSCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRD YP KWGLGPK+
Sbjct: 347 VATIKRVIMDRDVYPVKWGLGPKA 370
>gi|328771089|gb|EGF81129.1| hypothetical protein BATDEDRAFT_16206 [Batrachochytrium
dendrobatidis JAM81]
Length = 474
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D +VT+HDI DA ++YD +KDES LRRV+RPLE LL +KRI++K
Sbjct: 219 MQELRRVRSGAMGEDDEMVTMHDILDAQWVYDNNKDESYLRRVVRPLETLLTSYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE G++ EE+V+++TKGEA+ALA A M+T+ MA+CDHGV
Sbjct: 279 DSAVNAVCYGAKLMIPGLLRYESGVDTHEEVVLMTTKGEAIALAYAMMSTAEMASCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTYPRKWGLGP
Sbjct: 339 VAKIKRVIMERDTYPRKWGLGP 360
>gi|119874645|gb|ABM05799.1| dyskerin [Thermobia domestica]
Length = 215
Score = 216 bits (550), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 120/127 (94%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE++G+VT+HDI DA +LYD HKDES LRRVIRPLEGLL+ HKRII+K
Sbjct: 89 MLELRRVRSGIQSEKEGMVTMHDILDAQWLYDNHKDESYLRRVIRPLEGLLISHKRIIMK 148
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRYEDGIE+++EIVIV+TKGEAV+LA+A MTT+TMA+CDHGV
Sbjct: 149 DSAVNAVCYGAKIMLPGVLRYEDGIELNDEIVIVTTKGEAVSLAIALMTTATMASCDHGV 208
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 209 VAKIKRV 215
>gi|409051461|gb|EKM60937.1| hypothetical protein PHACADRAFT_247173 [Phanerochaete carnosa
HHB-10118-sp]
Length = 502
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA + YD +DES LRR IRPLE LL+G+KRI++K
Sbjct: 228 MQELRRVRSGALSENDEMVTMHDVLDAQWTYDNTRDESYLRRAIRPLESLLIGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADIALNEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGPKA 371
>gi|224139760|ref|XP_002323264.1| predicted protein [Populus trichocarpa]
gi|222867894|gb|EEF05025.1| predicted protein [Populus trichocarpa]
Length = 482
Score = 216 bits (550), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA ++YD ++DES LRRVI PLE +L +KR+++K
Sbjct: 230 MQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVILTSYKRLVVK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 290 DSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGPK+
Sbjct: 350 VAKIKRVVMDRDTYPRKWGLGPKA 373
>gi|47214790|emb|CAF89617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 285
Score = 216 bits (549), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 127/151 (84%), Gaps = 7/151 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + +D +KDES LRRVI PLE LLV HKR+++K
Sbjct: 101 MQELRRVRSGVLGEKDNMVTMHDVLDAQWQFDHNKDESYLRRVIFPLEKLLVSHKRLVMK 160
Query: 61 DSAV-------NAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
DSAV NA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ +
Sbjct: 161 DSAVSLFVTLVNAICYGAKIMLPGVLRYEDGIELNQDIVVITTKGEAICTAVALMTTAVI 220
Query: 114 ATCDHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
+TCDHGVVAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 221 STCDHGVVAKIKRVIMERDTYPRKWGLGPKA 251
>gi|336374989|gb|EGO03325.1| hypothetical protein SERLA73DRAFT_83244 [Serpula lacrymans var.
lacrymans S7.3]
Length = 526
Score = 216 bits (549), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRR IRPLE LLVG+KRI++K
Sbjct: 228 MQELRRVRSGAMSENDDIVTMHDVLDAQWMYDNTRDESYLRRTIRPLESLLVGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+ALA++QMTT +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADIALNEEVVLMTTKGEAIALAISQMTTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGP 369
>gi|384490232|gb|EIE81454.1| H/ACA ribonucleoprotein complex subunit 4 [Rhizopus delemar RA
99-880]
Length = 479
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 99/151 (65%), Positives = 125/151 (82%), Gaps = 9/151 (5%)
Query: 1 MIELRRNRSGIQSEE---------DGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLL 51
M ELRR RSG SE D +VT+HD+ DA +LYD KDE+ LRRVIRPLE LL
Sbjct: 212 MQELRRVRSGTTSENVCEKMISEHDDIVTMHDVLDAQWLYDNTKDETYLRRVIRPLESLL 271
Query: 52 VGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTS 111
+KR+++KDSAVNA+CYGA++M+PG+LR+E GIE+++EIV+++TKGEA+ALA AQMTT+
Sbjct: 272 TSYKRVVVKDSAVNAICYGAKLMVPGLLRFESGIEVNDEIVLMTTKGEAIALAYAQMTTA 331
Query: 112 TMATCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
MATCDHGVVAK+KRVIM+RDTYPR+WGLGP
Sbjct: 332 VMATCDHGVVAKVKRVIMERDTYPRRWGLGP 362
>gi|224090025|ref|XP_002308911.1| predicted protein [Populus trichocarpa]
gi|222854887|gb|EEE92434.1| predicted protein [Populus trichocarpa]
Length = 593
Score = 215 bits (547), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA ++YD ++DES LRR I PLE LL +KR+++K
Sbjct: 242 MQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRAIMPLEVLLTSYKRLVVK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEAVAL +A+MTT+ MATCDHGV
Sbjct: 302 DSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMTTKGEAVALGIAEMTTAVMATCDHGV 361
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 362 VAKIKRVVMDRDTYPRKWGLGPRA 385
>gi|213410128|ref|XP_002175834.1| centromere/microtubule-binding protein cbf5 [Schizosaccharomyces
japonicus yFS275]
gi|212003881|gb|EEB09541.1| centromere/microtubule-binding protein cbf5 [Schizosaccharomyces
japonicus yFS275]
Length = 478
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DE+ LRR+IRPLE LL +KRI++K
Sbjct: 218 MQELRRVRSGCLSENDDIVTMHDVLDAQWLYDNTRDETYLRRIIRPLECLLTNYKRIVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 278 DSAVNAVCYGAKLMIPGLLRYEAGIEVNEEVVLMTTKGEAIAVGIAQMSTVELSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGP+S
Sbjct: 338 VAKVKRCIMERDTYPRRWGLGPQS 361
>gi|320165785|gb|EFW42684.1| H/ACA ribonucleoprotein complex subunit 4 [Capsaspora owczarzaki
ATCC 30864]
Length = 536
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 97/144 (67%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ +E D LVT+HDI DA + D ++DES LRRV++PLE LLV HKR+++K
Sbjct: 263 MQELRRVRSGVLTENDHLVTMHDILDAQWQLDNNRDESYLRRVVKPLELLLVKHKRLVVK 322
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+C+GA+ MLPG+LR+E GIE+ EE+V+++TKGEA+ALA+AQMTT+ M+TCDHGV
Sbjct: 323 DSAVNAICFGAKFMLPGLLRFESGIEVGEEVVLMTTKGEAIALAIAQMTTAVMSTCDHGV 382
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+R TYPR+WGLGP +
Sbjct: 383 VAKIKRVIMERGTYPRRWGLGPNA 406
>gi|390604771|gb|EIN14162.1| putative rRNA pseudouridine synthase [Punctularia strigosozonata
HHB-11173 SS5]
Length = 534
Score = 215 bits (547), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 228 MQELRRVRSGALSENDDIVTMHDVMDAQWMYDNTRDESYLRRVIRPLECLLVGYKRIVVK 287
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I + EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 288 DSAVNAVCYGAKLMIPGLLRYEADISVHEEVVLMTTKGEAIALAIAQMSTVELATCDHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 348 VAKVKRCIMERDTYPRRWGLGP 369
>gi|255564866|ref|XP_002523427.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
gi|223537377|gb|EEF39006.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
Length = 581
Score = 214 bits (546), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA +++D ++DE+ LRRVI PLE LL +KR+++K
Sbjct: 223 MQELRRVRSGILGEKDNMVTMHDVMDAQWVFDNYRDETYLRRVIMPLEVLLTSYKRLVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ +E EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 283 DSAVNAICYGAKLMIPGLLRFENDVEAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGPK+
Sbjct: 343 VAKIKRVVMDRDTYPRKWGLGPKA 366
>gi|320581659|gb|EFW95878.1| centromere/microtubule-binding protein CBF5 [Ogataea parapolymorpha
DL-1]
Length = 473
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA +LYD +DES LR+VI PLE LLVG+KR+++K
Sbjct: 213 MQELRRVRSGALSENDNLVTLHDVMDAQWLYDNSRDESYLRKVISPLETLLVGYKRVVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT +A+CDHGV
Sbjct: 273 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMTTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|50306599|ref|XP_453273.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|3023443|sp|O13473.1|CBF5_KLULA RecName: Full=Centromere/microtubule-binding protein CBF5; AltName:
Full=Centromere-binding factor 5; AltName: Full=H/ACA
snoRNP protein CBF5; AltName: Full=Small nucleolar RNP
protein CBF5
gi|2258455|gb|AAC64862.1| centromere-binding factor 5 [Kluyveromyces lactis]
gi|49642407|emb|CAH00369.1| KLLA0D04796p [Kluyveromyces lactis]
Length = 474
Score = 214 bits (546), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNLVTLHDVMDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|307103593|gb|EFN51852.1| hypothetical protein CHLNCDRAFT_37236 [Chlorella variabilis]
Length = 444
Score = 214 bits (546), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D ++T+HD+ DA + +D DE+ LRRV+ PLE LL +KRI++K
Sbjct: 213 MQELRRVRSGIMGEKDNMITMHDVLDAQWTFDNLNDEAYLRRVVMPLETLLTNYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE+DEE+V+++TKGEA+A+A+AQMTTS MATCDHG
Sbjct: 273 DSAVNALCYGAKLMIPGLLRYESGIEVDEEVVLMTTKGEAIAVAVAQMTTSIMATCDHGC 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRVIMERDTYPRRWGLGP 354
>gi|414887790|tpg|DAA63804.1| TPA: hypothetical protein ZEAMMB73_356063 [Zea mays]
Length = 575
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D HKDES LRRV+ PLE LL +KR+++K
Sbjct: 253 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNHKDESYLRRVVMPLEVLLTSYKRLVVK 312
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 313 DSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 372
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 373 VAKIKRVVMDRDTYPRKWGLGP 394
>gi|297740386|emb|CBI30568.3| unnamed protein product [Vitis vinifera]
Length = 476
Score = 214 bits (545), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA ++YD ++DES LRRVI PLE +L +KR+++K
Sbjct: 179 MQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVK 238
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 239 DSAVNAICYGAKLMIPGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 298
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA+IKRV+MDRDTYPRKWGLGP++
Sbjct: 299 VARIKRVVMDRDTYPRKWGLGPRA 322
>gi|302695777|ref|XP_003037567.1| hypothetical protein SCHCODRAFT_255708 [Schizophyllum commune H4-8]
gi|300111264|gb|EFJ02665.1| hypothetical protein SCHCODRAFT_255708 [Schizophyllum commune H4-8]
Length = 513
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 225 MQELRRVRSGAMSENDEIVTMHDVLDAQWMYDNTRDESYLRRVIRPLECLLVGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+V+++TKGEA+A+ +AQM+T +ATCDHGV
Sbjct: 285 DSAVNAVCYGAKLMIPGLLRYEADINLNEEVVLMTTKGEAIAIGIAQMSTVELATCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 345 VAKVKRCIMERDTYPRRWGLGP 366
>gi|367010868|ref|XP_003679935.1| hypothetical protein TDEL_0B05950 [Torulaspora delbrueckii]
gi|359747593|emb|CCE90724.1| hypothetical protein TDEL_0B05950 [Torulaspora delbrueckii]
Length = 477
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LRR+I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDDMVTLHDVLDAQWVYDNTRDESYLRRIIKPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA++KR IM+RD YPR+WGLGP
Sbjct: 332 VAQVKRCIMERDLYPRRWGLGP 353
>gi|345560107|gb|EGX43235.1| hypothetical protein AOL_s00215g609 [Arthrobotrys oligospora ATCC
24927]
Length = 477
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++Y+ +DE+ LRRVIRPLE LL+G+KRI++K
Sbjct: 219 MQELRRVRSGALSENDNIVTLHDVLDAQWMYENTRDETYLRRVIRPLESLLLGYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LR+EDGIE+ EE+V+++TKGEA+A+ +AQM+T M TCDHGV
Sbjct: 279 DSAVNAVCYGAKLMLPGLLRFEDGIEVHEEVVLMTTKGEAIAIGIAQMSTVEMTTCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 339 VAKVKRCIMERDLYPRRWGMGP 360
>gi|170084049|ref|XP_001873248.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650800|gb|EDR15040.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 505
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DES LRRVIRPLE L++G+KRI++K
Sbjct: 226 MQELRRVRSGAMSENDDMVTMHDVMDAQWLYDNTRDESYLRRVIRPLECLMIGYKRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I + EE+V+++TKGEA+ALA+AQM+T +ATCDHGV
Sbjct: 286 DSAVNAVCYGAKLMIPGLLRYEADISVHEEVVLMTTKGEAIALAVAQMSTVELATCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 346 VAKVKRCIMERDTYPRRWGLGP 367
>gi|363748258|ref|XP_003644347.1| hypothetical protein Ecym_1291 [Eremothecium cymbalariae
DBVPG#7215]
gi|356887979|gb|AET37530.1| hypothetical protein Ecym_1291 [Eremothecium cymbalariae
DBVPG#7215]
Length = 447
Score = 214 bits (545), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNLVTLHDVLDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|225440338|ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
vinifera]
Length = 586
Score = 213 bits (543), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA ++YD ++DES LRRVI PLE +L +KR+++K
Sbjct: 246 MQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYRDESYLRRVIMPLEVVLTSYKRLVVK 305
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 306 DSAVNAICYGAKLMIPGLLRFENEIENGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 365
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA+IKRV+MDRDTYPRKWGLGP++
Sbjct: 366 VARIKRVVMDRDTYPRKWGLGPRA 389
>gi|358056117|dbj|GAA97857.1| hypothetical protein E5Q_04537 [Mixia osmundae IAM 14324]
Length = 518
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 101/144 (70%), Positives = 120/144 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA +LYD +DES LRRVIRPLE LL +KRI++K
Sbjct: 227 MQELRRVRSGAMSEADDMVTMHDVLDAQWLYDNTRDESYLRRVIRPLESLLTTYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV A+ YGAQ+MLPGVLRYE GIE+ EEIV+++TKGEA+ LA A+MTT ++TCDHGV
Sbjct: 287 DSAVAALTYGAQLMLPGVLRYEAGIELHEEIVLMTTKGEAICLAYARMTTVELSTCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM RDTYPR WGLGPK+
Sbjct: 347 VAKIKRVIMSRDTYPRAWGLGPKA 370
>gi|149248302|ref|XP_001528538.1| centromere/microtubule-binding protein CBF5 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448492|gb|EDK42880.1| centromere/microtubule-binding protein CBF5 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 476
Score = 213 bits (543), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 213 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRLVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++MLPG+LRYE GIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHGV
Sbjct: 273 DSAVNSVCYGAKLMLPGLLRYESGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|119874603|gb|ABM05778.1| dyskerin [Arenicola marina]
Length = 241
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 116/127 (91%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+DGL+T+HD+ DA Y YD +KDES LRRVI+PLE LLV HKRI+LK
Sbjct: 115 MQELRRVRSGIQSEKDGLMTMHDVLDAQYTYDHNKDESYLRRVIKPLEALLVSHKRIVLK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRYEDGIE++EEIVIV+TKGEAVALALAQMTT+ +ATCDHG
Sbjct: 175 DSAVNAVCYGAKIMLPGVLRYEDGIEINEEIVIVTTKGEAVALALAQMTTAVIATCDHGQ 234
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 235 VAKIKRV 241
>gi|301113300|ref|XP_002998420.1| H/ACA ribonucleoprotein complex subunit 4 [Phytophthora infestans
T30-4]
gi|262111721|gb|EEY69773.1| H/ACA ribonucleoprotein complex subunit 4 [Phytophthora infestans
T30-4]
Length = 480
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA + YD +KDES LRR++RPLE LL +KRI++K
Sbjct: 231 MQELRRVRSGVMGENDAMVTMHDVLDAQFQYDTYKDESYLRRIVRPLEVLLTTYKRIVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+ M+PG+LR+ D I++ EE+V+++TKGEA+A+A+AQMTT+ MATCDHGV
Sbjct: 291 DSSVNAICYGAKFMIPGLLRFADDIDVGEEVVLMTTKGEAIAVAIAQMTTAVMATCDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 351 VAKIKRVIMERDTYPRRWGLGP 372
>gi|448513805|ref|XP_003867014.1| Cbf5 protein [Candida orthopsilosis Co 90-125]
gi|380351352|emb|CCG21576.1| Cbf5 protein [Candida orthopsilosis Co 90-125]
Length = 472
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + CDHGV
Sbjct: 273 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAIGIAQMTTVDLQGCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|58266086|ref|XP_570199.1| centromere/microtubule binding protein cbf5 [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110942|ref|XP_775935.1| hypothetical protein CNBD3420 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258601|gb|EAL21288.1| hypothetical protein CNBD3420 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226432|gb|AAW42892.1| centromere/microtubule binding protein cbf5, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 503
Score = 213 bits (542), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +V++HD+ DA +LYD +DES LRRVIRPLE LLV +KRI++K
Sbjct: 230 MQELRRVRSGITGENDDIVSMHDVLDAQWLYDNTRDESYLRRVIRPLESLLVNYKRIVVK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE IE++EE+V+++TKGEA+A+ +AQM+T +A+CDHGV
Sbjct: 290 DSAVNAICYGAKLMIPGLLRYEADIEVNEEVVLMTTKGEAIAIGIAQMSTVDLASCDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPRKWGLGPK+
Sbjct: 350 VAKVKRCIMNRDLYPRKWGLGPKA 373
>gi|255720224|ref|XP_002556392.1| KLTH0H12078p [Lachancea thermotolerans]
gi|238942358|emb|CAR30530.1| KLTH0H12078p [Lachancea thermotolerans CBS 6340]
Length = 484
Score = 213 bits (541), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA ++YD +DES LR++I+PLE LL+G+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNLVTLHDVMDAQWVYDNTRDESYLRKIIQPLETLLLGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|225562235|gb|EEH10515.1| centromere/microtubule binding protein CBF5 [Ajellomyces capsulatus
G186AR]
Length = 486
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFESGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 340 VAKVKRCIMERDLYPRKWGLGP 361
>gi|449439649|ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
[Cucumis sativus]
Length = 564
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA + YD KDES LRRVI PLE +L +KR+++K
Sbjct: 231 MQELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFKDESYLRRVIMPLEVVLTSYKRLVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 291 DSAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 351 VAKIKRVVMDRDTYPRKWGLGPRA 374
>gi|348669879|gb|EGZ09701.1| hypothetical protein PHYSODRAFT_258871 [Phytophthora sojae]
Length = 477
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA + YD +KDES LRR++RPLE LL +KRI++K
Sbjct: 231 MQELRRVRSGVLGENDSMVTMHDVLDAQFQYDTYKDESYLRRIVRPLEVLLTTYKRIVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+ M+PG+LR+ D I++ EE+V+++TKGEA+A+A+AQMTT+ MATCDHGV
Sbjct: 291 DSSVNAICYGAKFMIPGLLRFADDIDIGEEVVLMTTKGEAIAVAIAQMTTAVMATCDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 351 VAKIKRVIMERDTYPRRWGLGP 372
>gi|242056883|ref|XP_002457587.1| hypothetical protein SORBIDRAFT_03g009870 [Sorghum bicolor]
gi|241929562|gb|EES02707.1| hypothetical protein SORBIDRAFT_03g009870 [Sorghum bicolor]
Length = 584
Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D +KDES LRRV+ PLE LL +KR+++K
Sbjct: 257 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPLEVLLTSYKRLVVK 316
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 317 DSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGVAEMTTAVMATCDHGA 376
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 377 VAKIKRVVMDRDTYPRKWGLGP 398
>gi|154284161|ref|XP_001542876.1| centromere/microtubule-binding protein cbf5 [Ajellomyces capsulatus
NAm1]
gi|150411056|gb|EDN06444.1| centromere/microtubule-binding protein cbf5 [Ajellomyces capsulatus
NAm1]
Length = 400
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 134 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 194 DSAVNAVCYGAKLMIPGLLRFESGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 253
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 254 VAKVKRCIMERDLYPRKWGLGP 275
>gi|354546883|emb|CCE43615.1| hypothetical protein CPAR2_212590 [Candida parapsilosis]
Length = 474
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE GIE+ +E+V+++TKGEA+A+ +AQMTT + CDHGV
Sbjct: 273 DSAVNSVCYGAKLMIPGLLRYEQGIELYDEVVLITTKGEAIAIGIAQMTTVDLQGCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|353242876|emb|CCA74481.1| probable CBF5-Centromere Binding Factor / putative rRNA
pseuduridine synthase [Piriformospora indica DSM 11827]
Length = 532
Score = 212 bits (540), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 96/144 (66%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA YL++ DES LRRVIRPLE LL G+KRI++K
Sbjct: 225 MQELRRVRSGALSENDDIVTMHDVLDAQYLFEHSGDESYLRRVIRPLESLLTGYKRIVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+ M+PG+LRYE GIE+ +E+V+++TKGEA+ALA+AQM ++ +AT DHGV
Sbjct: 285 DSSVNAICYGAKFMIPGLLRYESGIEVGDEVVLMTTKGEAIALAIAQMASADLATADHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKR IM+RDTYPRKWGLGP++
Sbjct: 345 VAKIKRCIMERDTYPRKWGLGPQA 368
>gi|356525850|ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 555
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +V++HD+ DA ++YD ++DE+ LRRV+ PLE LL +KR+++K
Sbjct: 207 MQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNYRDETYLRRVVMPLEILLTSYKRLVVK 266
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+ M+PG+LR+E+ I++ EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 267 DSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 326
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 327 VAKIKRVVMDRDTYPRKWGLGPRA 350
>gi|425766601|gb|EKV05205.1| Centromere/microtubule-binding protein CBF5 [Penicillium digitatum
PHI26]
gi|425781695|gb|EKV19642.1| Centromere/microtubule-binding protein CBF5 [Penicillium digitatum
Pd1]
Length = 762
Score = 212 bits (540), Expect = 4e-53, Method: Composition-based stats.
Identities = 93/144 (64%), Positives = 120/144 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++YD ++DES LR+VI PLE LL G+KRI++K
Sbjct: 508 MQELRRVRSGAMGEGPGMVTLHDVMDAQWVYDNNRDESYLRKVISPLESLLTGYKRIVVK 567
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T + TCDHGV
Sbjct: 568 DSAVNAVCYGAKLMIPGLLRYEAGIECHEEVVLMTTKGEAIAIGIAQMSTVELTTCDHGV 627
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGP +
Sbjct: 628 VAKVKRCIMERDLYPRRWGLGPTA 651
>gi|260941752|ref|XP_002615042.1| centromere/microtubule binding protein CBF5 [Clavispora lusitaniae
ATCC 42720]
gi|238851465|gb|EEQ40929.1| centromere/microtubule binding protein CBF5 [Clavispora lusitaniae
ATCC 42720]
Length = 475
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D +VTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 211 MQELRRVRSGAMGENDNMVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRVVVK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHGV
Sbjct: 271 DSAVNSVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGV 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 331 VAKVKRCIMERDTYPRRWGLGP 352
>gi|449486954|ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4-like [Cucumis sativus]
Length = 566
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA + YD KDES LRRVI PLE +L +KR+++K
Sbjct: 231 MQELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFKDESYLRRVIMPLEVVLTSYKRLVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 291 DSAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 351 VAKIKRVVMDRDTYPRKWGLGPRA 374
>gi|254569894|ref|XP_002492057.1| Pseudouridine synthase catalytic subunit of box H/ACA small
nucleolar ribonucleoprotein particles [Komagataella
pastoris GS115]
gi|238031854|emb|CAY69777.1| Pseudouridine synthase catalytic subunit of box H/ACA small
nucleolar ribonucleoprotein particles [Komagataella
pastoris GS115]
gi|328351452|emb|CCA37851.1| H/ACA ribonucleoprotein complex subunit 4 [Komagataella pastoris
CBS 7435]
Length = 482
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA ++YD +DE+ LR++I PLE LL+G+KR+++K
Sbjct: 213 MQELRRVRSGALSENDNLVTLHDVMDAQWVYDNSRDETYLRKIIHPLETLLIGYKRVVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT +++CDHGV
Sbjct: 273 DSAVNAVCYGAKLMLPGLLRYEEGIELYDEVVLITTKGEAIAIGIAQMTTVDLSSCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|448115067|ref|XP_004202740.1| Piso0_001595 [Millerozyma farinosa CBS 7064]
gi|359383608|emb|CCE79524.1| Piso0_001595 [Millerozyma farinosa CBS 7064]
Length = 479
Score = 212 bits (540), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA Y+YD +DES LR+VI+PLE LLVG+KR+++K
Sbjct: 212 MQELRRVRSGAMDENSNLVTLHDVMDAQYIYDNTRDESYLRKVIQPLETLLVGYKRVVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHGV
Sbjct: 272 DSAVNSVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRCIMERDTYPRRWGLGP 353
>gi|239613209|gb|EEQ90196.1| centromere/microtubule binding protein CBF5 [Ajellomyces
dermatitidis ER-3]
gi|327354718|gb|EGE83575.1| centromere/microtubule-binding protein cbf5 [Ajellomyces
dermatitidis ATCC 18188]
Length = 489
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 340 VAKVKRCIMERDLYPRKWGLGP 361
>gi|414876855|tpg|DAA53986.1| TPA: hypothetical protein ZEAMMB73_001838 [Zea mays]
Length = 579
Score = 212 bits (539), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D +KDES LRRV+ PLE LL +KR+++K
Sbjct: 254 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPLEVLLTSYKRLVVK 313
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 314 DSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 373
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 374 VAKIKRVVMDRDTYPRKWGLGP 395
>gi|190347847|gb|EDK40196.2| centromere/microtubule-binding protein CBF5 [Meyerozyma
guilliermondii ATCC 6260]
Length = 501
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 235 MQELRRVRSGALAENDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHG+
Sbjct: 295 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGI 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 355 VAKVKRCIMERDTYPRRWGLGP 376
>gi|146415190|ref|XP_001483565.1| centromere/microtubule-binding protein CBF5 [Meyerozyma
guilliermondii ATCC 6260]
Length = 501
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 235 MQELRRVRSGALAENDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHG+
Sbjct: 295 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGI 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 355 VAKVKRCIMERDTYPRRWGLGP 376
>gi|261190865|ref|XP_002621841.1| centromere/microtubule binding protein CBF5 [Ajellomyces
dermatitidis SLH14081]
gi|239590885|gb|EEQ73466.1| centromere/microtubule binding protein CBF5 [Ajellomyces
dermatitidis SLH14081]
Length = 482
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 340 VAKVKRCIMERDLYPRKWGLGP 361
>gi|356554746|ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
max]
Length = 589
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +V++HD+ DA ++YD ++DE+ LRRV+ PLE LL +KR+++K
Sbjct: 240 MQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNYRDETYLRRVVMPLEILLTSYKRLVVK 299
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+ M+PG+LR+E+ I++ EE+V+++TKGEA+AL +A+MTT+ MATCDHGV
Sbjct: 300 DSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLMTTKGEAIALGIAEMTTAVMATCDHGV 359
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 360 VAKIKRVVMDRDTYPRKWGLGPRA 383
>gi|242051008|ref|XP_002463248.1| hypothetical protein SORBIDRAFT_02g040540 [Sorghum bicolor]
gi|241926625|gb|EER99769.1| hypothetical protein SORBIDRAFT_02g040540 [Sorghum bicolor]
Length = 586
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D +KDES LRRV+ PLE LL +KR+++K
Sbjct: 254 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPLEVLLTSYKRLVVK 313
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 314 DSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 373
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 374 VAKIKRVVMDRDTYPRKWGLGP 395
>gi|410083104|ref|XP_003959130.1| hypothetical protein KAFR_0I02150 [Kazachstania africana CBS 2517]
gi|372465720|emb|CCF59995.1| hypothetical protein KAFR_0I02150 [Kazachstania africana CBS 2517]
Length = 463
Score = 212 bits (539), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR++++PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRKIVQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA++KR IM+RD YPR+WGLGP
Sbjct: 332 VARVKRCIMERDLYPRRWGLGP 353
>gi|388583038|gb|EIM23341.1| putative rRNA pseudouridine synthase [Wallemia sebi CBS 633.66]
Length = 486
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D +V++HD+ DA ++YD +DES LRRVIRPLE LLV +KRI++K
Sbjct: 220 MQELRRVRSGAMSEDDDIVSMHDVLDAQWIYDNTRDESYLRRVIRPLEALLVNYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE+GIE++EE+V+++TKGEA+A+ +AQM+T+ ++T DHGV
Sbjct: 280 DSAVNALCYGAKLMIPGLLRYENGIEVNEEVVLMTTKGEAIAVGIAQMSTADLSTVDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKR IM+RD +PRKWGLGP++
Sbjct: 340 VAKIKRCIMERDWFPRKWGLGPRA 363
>gi|300175686|emb|CBK21229.2| unnamed protein product [Blastocystis hominis]
Length = 459
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E DG+VT+HD+ DA ++YD +DES LRRV+RPLE LL+ HK++++K
Sbjct: 237 MQELRRVRSGNITENDGIVTMHDVLDAQWVYDTRRDESYLRRVVRPLEILLLKHKKVVVK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ DGIE+ +E+V+++TKGEA+A+ +AQMTT+ MA+CDHG+
Sbjct: 297 DSAVNAICYGAKLMIPGLLRFSDGIEIGDEVVLMTTKGEAIAIGVAQMTTAVMASCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
V K+KRVIM+RDTYPR+WGLGP
Sbjct: 357 VCKLKRVIMERDTYPRRWGLGP 378
>gi|300122324|emb|CBK22896.2| unnamed protein product [Blastocystis hominis]
Length = 474
Score = 211 bits (538), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 125/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E DG+VT+HD+ DA ++YD +DES LRRV+RPLE LL+ HK++++K
Sbjct: 237 MQELRRVRSGNITENDGIVTMHDVLDAQWVYDTRRDESYLRRVVRPLEILLLKHKKVVVK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ DGIE+ +E+V+++TKGEA+A+ +AQMTT+ MA+CDHG+
Sbjct: 297 DSAVNAICYGAKLMIPGLLRFSDGIEIGDEVVLMTTKGEAIAIGVAQMTTAVMASCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
V K+KRVIM+RDTYPR+WGLGP
Sbjct: 357 VCKLKRVIMERDTYPRRWGLGP 378
>gi|321257598|ref|XP_003193645.1| centromere/microtubule binding protein cbf5 [Cryptococcus gattii
WM276]
gi|317460115|gb|ADV21858.1| Centromere/microtubule binding protein cbf5, putative [Cryptococcus
gattii WM276]
Length = 503
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +V++HD+ DA +LYD +DES LRRVIRPLE LL +KRI++K
Sbjct: 230 MQELRRVRSGITGENDDIVSMHDVLDAQWLYDNTRDESYLRRVIRPLESLLTNYKRIVVK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE IE++EE+V+++TKGEA+A+ +AQM+T +A+CDHGV
Sbjct: 290 DSAVNAICYGAKLMIPGLLRYEADIEVNEEVVLMTTKGEAIAIGIAQMSTVDLASCDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPRKWGLGPK+
Sbjct: 350 VAKVKRCIMNRDLYPRKWGLGPKA 373
>gi|405120206|gb|AFR94977.1| centromere/microtubule binding protein cbf5 [Cryptococcus
neoformans var. grubii H99]
Length = 503
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +V++HD+ DA +LYD +DES LRRVIRPLE LL +KRI++K
Sbjct: 230 MQELRRVRSGITGENDDIVSMHDVLDAQWLYDNTRDESYLRRVIRPLESLLTNYKRIVVK 289
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE IE++EE+V+++TKGEA+A+ +AQM+T +A+CDHGV
Sbjct: 290 DSAVNAICYGAKLMIPGLLRYEADIEVNEEVVLMTTKGEAIAIGIAQMSTVDLASCDHGV 349
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPRKWGLGPK+
Sbjct: 350 VAKVKRCIMNRDLYPRKWGLGPKA 373
>gi|410730545|ref|XP_003980093.1| hypothetical protein NDAI_0G04320 [Naumovozyma dairenensis CBS 421]
gi|401780270|emb|CCK73417.1| hypothetical protein NDAI_0G04320 [Naumovozyma dairenensis CBS 421]
Length = 483
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNMVTLHDVLDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|366992157|ref|XP_003675844.1| hypothetical protein NCAS_0C04900 [Naumovozyma castellii CBS 4309]
gi|342301709|emb|CCC69480.1| hypothetical protein NCAS_0C04900 [Naumovozyma castellii CBS 4309]
Length = 475
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|68490857|ref|XP_710755.1| likely snoRNP-associated pseudouridylate synthase [Candida albicans
SC5314]
gi|68490939|ref|XP_710717.1| likely snoRNP-associated pseudouridylate synthase [Candida albicans
SC5314]
gi|3334141|sp|O43101.1|CBF5_CANAL RecName: Full=Centromere/microtubule-binding protein CBF5; AltName:
Full=Centromere-binding factor 5; AltName: Full=H/ACA
snoRNP protein CBF5; AltName: Full=Small nucleolar RNP
protein CBF5
gi|2737890|gb|AAB94297.1| nucleolar protein CaCbf5p [Candida albicans]
gi|46431954|gb|EAK91469.1| likely snoRNP-associated pseudouridylate synthase [Candida albicans
SC5314]
gi|46431996|gb|EAK91507.1| likely snoRNP-associated pseudouridylate synthase [Candida albicans
SC5314]
gi|238878534|gb|EEQ42172.1| centromere/microtubule-binding protein CBF5 [Candida albicans WO-1]
Length = 479
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 214 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLESLLVGYKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQM+T + +CDHG+
Sbjct: 274 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMSTVDLQSCDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 334 VAKVKRCIMERDTYPRRWGLGP 355
>gi|241949831|ref|XP_002417638.1| H/ACA ribonucleoprotein complex subunit, putative;
centromere/microtubule-binding protein, putative; small
nucleolar rnp protein, putative [Candida dubliniensis
CD36]
gi|223640976|emb|CAX45321.1| H/ACA ribonucleoprotein complex subunit, putative [Candida
dubliniensis CD36]
Length = 476
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 214 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLESLLVGYKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQM+T + +CDHG+
Sbjct: 274 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMSTVDLQSCDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 334 VAKVKRCIMERDTYPRRWGLGP 355
>gi|325091764|gb|EGC45074.1| centromere/microtubule binding protein CBF5 [Ajellomyces capsulatus
H88]
Length = 490
Score = 211 bits (538), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 224 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 284 DSAVNAVCYGAKLMIPGLLRFESGIEIHEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 344 VAKVKRCIMERDLYPRKWGLGP 365
>gi|212536058|ref|XP_002148185.1| pseudouridylate synthase family protein [Talaromyces marneffei ATCC
18224]
gi|210070584|gb|EEA24674.1| pseudouridylate synthase family protein [Talaromyces marneffei ATCC
18224]
Length = 481
Score = 211 bits (538), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG EEDG+VTLHD+ DA +L D +DES LRRVIRPLE LL +KRI++K
Sbjct: 219 MQELRRVRSGAMDEEDGMVTLHDVLDAQWLMDNQRDESYLRRVIRPLESLLTTYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 279 DSAVNAVCYGAKLMIPGLLRFEAGIEVGEEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 339 VAKVKRCIMERDLYPRRWGLGP 360
>gi|156839487|ref|XP_001643434.1| hypothetical protein Kpol_487p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156114044|gb|EDO15576.1| hypothetical protein Kpol_487p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 470
Score = 211 bits (537), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALGENDNMVTLHDVMDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|443920908|gb|ELU40730.1| centromere/microtubule binding protein cbf5 [Rhizoctonia solani
AG-1 IA]
Length = 516
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 96/146 (65%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA + YD +DES LRRVIRPLE L+VG+KRI++K
Sbjct: 222 MQELRRVRSGAMSENDDIVTMHDVLDAQWTYDNTRDESYLRRVIRPLECLMVGYKRIVVK 281
Query: 61 DSAVNAVCYGAQIMLPGVLRY--EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
DSAVNAVCYGA++M+PG+LRY + IE+ EE+V+++TKGEA+ALA+AQM+T+ +A+CDH
Sbjct: 282 DSAVNAVCYGAKLMIPGLLRYGEQANIEVHEEVVLMTTKGEAIALAIAQMSTADLASCDH 341
Query: 119 GVVAKIKRVIMDRDTYPRKWGLGPKS 144
GVVAK+KR IM+RDTYPR+WGLGP++
Sbjct: 342 GVVAKVKRCIMERDTYPRRWGLGPRA 367
>gi|358333510|dbj|GAA34033.2| H/ACA ribonucleoprotein complex subunit 4, partial [Clonorchis
sinensis]
Length = 375
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 97/142 (68%), Positives = 126/142 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +EED +VT+HDI DA +LYD +DES LRRVI PLE LL+GHKRI+LK
Sbjct: 186 MEELRRIRSGILTEEDNMVTMHDILDAKWLYDNRRDESYLRRVIMPLEKLLIGHKRIMLK 245
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+CYGA++MLPGVLRY++ I +++EIV+++TKGEA+A+A+A MTT+T+ATCDHG+
Sbjct: 246 DTAVSAICYGAKLMLPGVLRYDNDITVNDEIVLMTTKGEAIAIAIALMTTATIATCDHGL 305
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RD YPR+WG GP
Sbjct: 306 VAKLKRVIMERDLYPRQWGRGP 327
>gi|45184817|ref|NP_982535.1| AAL007Cp [Ashbya gossypii ATCC 10895]
gi|44980426|gb|AAS50359.1| AAL007Cp [Ashbya gossypii ATCC 10895]
gi|374105734|gb|AEY94645.1| FAAL007Cp [Ashbya gossypii FDAG1]
Length = 485
Score = 211 bits (537), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALDENDNMVTLHDVLDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|452822543|gb|EME29561.1| H/ACA ribonucleoprotein complex subunit 4 [Galdieria sulphuraria]
Length = 485
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVT+HD+ DA +LY+ DES LRRVI PLE LLVG+KR+++K
Sbjct: 221 MQELRRVRSGAMGENSGLVTMHDVLDAQWLYETCGDESYLRRVIMPLEALLVGYKRVVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E GIE+ EEIVI++TKGEA+AL +A+MT++ MAT DHGV
Sbjct: 281 DSAVNAICYGAKVMIPGLLRFESGIEVGEEIVIMTTKGEAIALGIAEMTSAVMATVDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
+A+IKRVIM+RDTYPR+WGLGP
Sbjct: 341 IARIKRVIMERDTYPRRWGLGP 362
>gi|308080175|ref|NP_001183905.1| uncharacterized protein LOC100502498 [Zea mays]
gi|238015364|gb|ACR38717.1| unknown [Zea mays]
gi|413947018|gb|AFW79667.1| hypothetical protein ZEAMMB73_071792 [Zea mays]
Length = 583
Score = 211 bits (537), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D +KDES LRRV+ PLE LL +KR+++K
Sbjct: 256 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPLEVLLTSYKRLVVK 315
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 316 DSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 375
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
V+KIKRV+MDRDTYPRKWGLGP
Sbjct: 376 VSKIKRVVMDRDTYPRKWGLGP 397
>gi|119498611|ref|XP_001266063.1| centromere/microtubule binding protein cbf5 [Neosartorya fischeri
NRRL 181]
gi|119414227|gb|EAW24166.1| centromere/microtubule binding protein cbf5 [Neosartorya fischeri
NRRL 181]
Length = 487
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +GLVTLHD+ DA ++YD +DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENNGLVTLHDVLDAQWMYDNQRDESYLRRVIRPLESLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GI+++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIDVNEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|219120454|ref|XP_002180965.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407681|gb|EEC47617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 484
Score = 211 bits (536), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG+ EED LVTLHD+ DA ++YD KDE+ LRRV+ PLE LL +KRI++K
Sbjct: 234 MQELRRVKSGVLGEEDNLVTLHDVMDAQHVYDTTKDETYLRRVVMPLETLLTNYKRIVVK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ D IE+++E+V+++TKGEA+A+ALAQMTT+ MAT DHGV
Sbjct: 294 DSAVNAICYGAKLMIPGLLRFADDIELNQEVVLMTTKGEAIAVALAQMTTAVMATVDHGV 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YPR+WGLGP
Sbjct: 354 VAKIKRVIMERDVYPRRWGLGP 375
>gi|50426879|ref|XP_462038.1| DEHA2G11748p [Debaryomyces hansenii CBS767]
gi|49657708|emb|CAG90524.1| DEHA2G11748p [Debaryomyces hansenii CBS767]
Length = 472
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + CDHGV
Sbjct: 272 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMTTVDLQGCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRCIMERDTYPRRWGLGP 353
>gi|70998678|ref|XP_754061.1| pseudouridylate synthase family protein [Aspergillus fumigatus
Af293]
gi|3334142|sp|O43102.1|CBF5_ASPFU RecName: Full=Centromere/microtubule-binding protein cbf5; AltName:
Full=Centromere-binding factor 5; AltName: Full=H/ACA
snoRNP protein cbf5; AltName: Full=Small nucleolar RNP
protein cbf5
gi|2737892|gb|AAB94298.1| nucleolar protein AfCbf5p [Aspergillus fumigatus]
gi|66851697|gb|EAL92023.1| pseudouridylate synthase family protein [Aspergillus fumigatus
Af293]
gi|159126206|gb|EDP51322.1| pseudouridylate synthase family protein [Aspergillus fumigatus
A1163]
Length = 487
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +GLVTLHD+ DA ++YD +DES LRRVI+PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENNGLVTLHDVLDAQWMYDNQRDESYLRRVIQPLESLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEVNEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|452982351|gb|EME82110.1| hypothetical protein MYCFIDRAFT_215584 [Pseudocercospora fijiensis
CIRAD86]
Length = 509
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD DA +LYD +DES LR VI+PLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEQDGMVTLHDCLDAQWLYDNQRDESYLRTVIKPLETLLTTYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+ALA+AQM+T +++CDHG+
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRYESGIEVHEEVVLITTKGEAIALAIAQMSTVELSSCDHGI 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|344229205|gb|EGV61091.1| putative rRNA pseudouridine synthase [Candida tenuis ATCC 10573]
gi|344229206|gb|EGV61092.1| hypothetical protein CANTEDRAFT_116369 [Candida tenuis ATCC 10573]
Length = 466
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGAMDENDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMT+ + +CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIEIYDEVVLMTTKGEAIAIGIAQMTSVDLQSCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|391342420|ref|XP_003745518.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Metaseiulus occidentalis]
Length = 457
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 121/141 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D +VT+HDIKDAMY Y+ ++DES LRRV+RPLEGLL KRI++K
Sbjct: 241 MTELRRCRSGTNRETDTMVTMHDIKDAMYAYENNRDESYLRRVVRPLEGLLTDKKRIVMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+IMLPGVLRY+ GI++++E+V+++TKGEA+ LA+A MT+ST+A+ DHG
Sbjct: 301 DSSVNAICYGAKIMLPGVLRYDAGIDLNDEVVVMTTKGEAICLAIALMTSSTIASVDHGC 360
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
VAKIKRV+M+RD YPR WGLG
Sbjct: 361 VAKIKRVVMERDVYPRSWGLG 381
>gi|242794744|ref|XP_002482438.1| pseudouridylate synthase family protein [Talaromyces stipitatus
ATCC 10500]
gi|218719026|gb|EED18446.1| pseudouridylate synthase family protein [Talaromyces stipitatus
ATCC 10500]
Length = 483
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA +L D +DES LR+VIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEQDGMVTLHDVLDAQWLMDNQRDESYLRKVIRPLESLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE++EE+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEVNEEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|225685065|gb|EEH23349.1| centromere/microtubule-binding protein cbf5 [Paracoccidioides
brasiliensis Pb03]
Length = 491
Score = 211 bits (536), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEMDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 340 VAKVKRCIMERDLYPRKWGLGP 361
>gi|3334140|sp|O43100.1|CBF5_EMENI RecName: Full=Centromere/microtubule-binding protein CBF5; AltName:
Full=Centromere-binding factor 5; AltName: Full=H/ACA
snoRNP protein CBF5; AltName: Full=Small nucleolar RNP
protein CBF5; AltName: Full=rRNA pseudouridine synthase
gi|2737888|gb|AAB94296.1| nucleolar protein AnCbf5p [Emericella nidulans]
gi|19743614|gb|AAL23694.1| rRNA pseudouridine synthase [Emericella nidulans]
gi|259482934|tpe|CBF77883.1| TPA: Centromere/microtubule-binding protein CBF5
(Centromere-binding factor 5)(Small nucleolar RNP
protein CBF5)(H/ACA snoRNP protein CBF5)(rRNA
pseudouridine synthase)
[Source:UniProtKB/Swiss-Prot;Acc:O43100] [Aspergillus
nidulans FGSC A4]
Length = 481
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE +G+VTLHD+ DA +LYD +DES LR+VI+PLE LL +KRI++K
Sbjct: 215 MQELRRVRSGAMSENEGMVTLHDVLDAQWLYDNQRDESYLRKVIKPLESLLTTYKRIVVK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 275 DSAVNAVCYGAKLMIPGLLRFEAGIELGEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 335 VAKVKRCIMERDLYPRRWGLGP 356
>gi|315049135|ref|XP_003173942.1| centromere/microtubule-binding protein cbf5 [Arthroderma gypseum
CBS 118893]
gi|311341909|gb|EFR01112.1| centromere/microtubule-binding protein cbf5 [Arthroderma gypseum
CBS 118893]
Length = 495
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LRRVIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRRVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIELYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|255728133|ref|XP_002548992.1| centromere/microtubule-binding protein CBF5 [Candida tropicalis
MYA-3404]
gi|240133308|gb|EER32864.1| centromere/microtubule-binding protein CBF5 [Candida tropicalis
MYA-3404]
Length = 480
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 213 MQELRRVRSGAMSENDNMVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRVVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQM+T + +CDHGV
Sbjct: 273 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMSTVDLQSCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 333 VAKVKRCIMERDTYPRRWGLGP 354
>gi|226294376|gb|EEH49796.1| centromere/microtubule-binding protein CBF5 [Paracoccidioides
brasiliensis Pb18]
Length = 491
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E DG+VTLHD+ DA ++ D ++DES LRRVIRPLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDEMDGMVTLHDVLDAQWMMDNNRDESYLRRVIRPLESLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEIHEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPRKWGLGP
Sbjct: 340 VAKVKRCIMERDLYPRKWGLGP 361
>gi|119874623|gb|ABM05788.1| dyskerin [Archispirostreptus gigas]
Length = 233
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 117/127 (92%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D LVT+HD+ DA +LYD HKDESLLRRVI+PLE LLV HKRII+K
Sbjct: 107 MQELRRVRSGIQSEHDNLVTMHDLLDAQWLYDNHKDESLLRRVIKPLEALLVSHKRIIVK 166
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRY++GIE+++EIVIV+TKGEAVALA+A MTT+T+A+CDHGV
Sbjct: 167 DSAVNAICYGAKIMLPGVLRYDNGIELNQEIVIVTTKGEAVALAIALMTTATIASCDHGV 226
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 227 VAKIKRV 233
>gi|296422752|ref|XP_002840923.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637149|emb|CAZ85114.1| unnamed protein product [Tuber melanosporum]
Length = 464
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 122/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA +L D +DE+ LRRVIRPLE LL +KRI++K
Sbjct: 219 MQELRRVRSGALSENDNIVTLHDVLDAQWLADNSRDETYLRRVIRPLESLLTTYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE++EE+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 279 DSAVNAVCYGAKLMIPGLLRYEAGIEVNEEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGP +
Sbjct: 339 VAKVKRCIMERDLYPRRWGLGPTA 362
>gi|326525859|dbj|BAJ93106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 605
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D HKDES +RRV+ PLE +L +KR+++K
Sbjct: 256 MQELRRVRSGILGEQDNMVTMHDVMDAMWALDNHKDESYIRRVVMPLEVILTSYKRLVVK 315
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+M T+ MATCDHG
Sbjct: 316 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMPTAVMATCDHGA 375
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 376 VAKIKRVVMDRDTYPRKWGLGP 397
>gi|297820502|ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp.
lyrata]
gi|297323972|gb|EFH54393.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp.
lyrata]
Length = 561
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E + +VT+HD+ DA ++YD +DES LRRVI PLE +L +KR+++K
Sbjct: 234 MQELRRVRSGILGENNNMVTMHDVMDAQFVYDNSRDESYLRRVIMPLEMILTSYKRLVVK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ E+V+++TKGEA+A+ +A+MTTS MATCDHGV
Sbjct: 294 DSAVNAICYGAKLMIPGLLRFENDIDVGTEVVLMTTKGEAIAVGIAEMTTSVMATCDHGV 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRA 377
>gi|115438500|ref|XP_001218082.1| centromere/microtubule-binding protein cbf5 [Aspergillus terreus
NIH2624]
gi|114188897|gb|EAU30597.1| centromere/microtubule-binding protein cbf5 [Aspergillus terreus
NIH2624]
Length = 464
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 120/140 (85%)
Query: 3 ELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDS 62
ELRR RSG E G+VTLHD+ DA ++YD +DES LRRVIRPLE LL G+KRI++KDS
Sbjct: 207 ELRRVRSGAMDENSGMVTLHDVMDAQWMYDNQRDESYLRRVIRPLETLLTGYKRIVVKDS 266
Query: 63 AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVA 122
AVNAVCYGA++M+PG+LR+E GI+++EE+V+++TKGEA+A+ +AQM+T + TCDHGVVA
Sbjct: 267 AVNAVCYGAKLMIPGLLRFEAGIDVNEEVVLMTTKGEAIAIGIAQMSTVELTTCDHGVVA 326
Query: 123 KIKRVIMDRDTYPRKWGLGP 142
K+KR IM+RD YPR+WGLGP
Sbjct: 327 KVKRCIMERDLYPRRWGLGP 346
>gi|344305042|gb|EGW35274.1| nucleolar pseudouridine synthase and putative microtubule binding
protein [Spathaspora passalidarum NRRL Y-27907]
Length = 465
Score = 210 bits (535), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSEADEMVTLHDVLDAQFVYDNTRDESYLRKIIKPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHG+
Sbjct: 272 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAIGIAQMTTVDLQSCDHGI 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRCIMERDTYPRRWGLGP 353
>gi|349579890|dbj|GAA25051.1| K7_Cbf5p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 486
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|256274339|gb|EEU09244.1| Cbf5p [Saccharomyces cerevisiae JAY291]
gi|259148167|emb|CAY81414.1| Cbf5p [Saccharomyces cerevisiae EC1118]
gi|323303844|gb|EGA57626.1| Cbf5p [Saccharomyces cerevisiae FostersB]
gi|323336447|gb|EGA77714.1| Cbf5p [Saccharomyces cerevisiae Vin13]
gi|323353763|gb|EGA85618.1| Cbf5p [Saccharomyces cerevisiae VL3]
gi|365764025|gb|EHN05550.1| Cbf5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392297685|gb|EIW08784.1| Cbf5p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 486
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|190405245|gb|EDV08512.1| major low affinity 55 kDa centromere/microtubule binding protein
[Saccharomyces cerevisiae RM11-1a]
Length = 477
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|151941019|gb|EDN59399.1| pseudouridine synthase [Saccharomyces cerevisiae YJM789]
Length = 483
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|6323204|ref|NP_013276.1| pseudouridine synthase CBF5 [Saccharomyces cerevisiae S288c]
gi|461698|sp|P33322.1|CBF5_YEAST RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=Centromere-binding factor 5; AltName:
Full=Centromere/microtubule-binding protein CBF5;
AltName: Full=H/ACA snoRNP protein CBF5; AltName:
Full=Small nucleolar RNP protein CBF5; AltName:
Full=p64'
gi|311097|gb|AAA34473.1| centromere/microtubule binding protein [Saccharomyces cerevisiae]
gi|577203|gb|AAB67463.1| Cbf5p: centromere/microtubule binding protein [Saccharomyces
cerevisiae]
gi|285813599|tpg|DAA09495.1| TPA: pseudouridine synthase CBF5 [Saccharomyces cerevisiae S288c]
Length = 483
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|401624599|gb|EJS42654.1| cbf5p [Saccharomyces arboricola H-6]
Length = 482
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|406605131|emb|CCH43424.1| H/ACA ribonucleoprotein complex subunit 4 [Wickerhamomyces
ciferrii]
Length = 483
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E D LVTLHD+ DA + YD +DES LRR+I+PLE LL+G+KRI++K
Sbjct: 212 MQELRRVRSGALAENDNLVTLHDVLDAQWSYDNTRDESYLRRIIQPLETLLLGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A++QM+T +A+CDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAIAISQMSTVDLASCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 332 VAKVKRCIMERDLYPRRWGLGP 353
>gi|15230232|ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]
gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName:
Full=CBF5 homolog; AltName: Full=Dyskerin; AltName:
Full=Nopp-140-associated protein of 57 kDa homolog;
Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
homolog
gi|8901186|gb|AAF43210.2|AF234984_1 putative pseudouridine synthase [Arabidopsis thaliana]
gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis thaliana]
gi|28392852|gb|AAO41863.1| unknown protein [Arabidopsis thaliana]
gi|225898727|dbj|BAH30494.1| hypothetical protein [Arabidopsis thaliana]
gi|332646100|gb|AEE79621.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]
Length = 565
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E + +VT+HD+ DA ++YD +DES LRRVI PLE +L +KR+++K
Sbjct: 234 MQELRRVRSGILGENNNMVTMHDVMDAQFVYDNSRDESYLRRVIMPLEMILTSYKRLVVK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ E+V+++TKGEA+A+ +A+MTTS MATCDHGV
Sbjct: 294 DSAVNAICYGAKLMIPGLLRFENDIDVGTEVVLMTTKGEAIAVGIAEMTTSVMATCDHGV 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRA 377
>gi|323347402|gb|EGA81673.1| Cbf5p [Saccharomyces cerevisiae Lalvin QA23]
Length = 471
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|361131882|pdb|3U28|A Chain A, Crystal Structure Of A Cbf5-Nop10-Gar1 Complex From
Saccharomyces Cerevisiae
gi|361132369|pdb|3UAI|A Chain A, Structure Of The Shq1-Cbf5-Nop10-Gar1 Complex From
Saccharomyces Cerevisiae
Length = 400
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|326513743|dbj|BAJ87890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 605
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D HKDES +RRV+ PLE +L +KR+++K
Sbjct: 256 MQELRRVRSGILGEQDNMVTMHDVMDAMWALDNHKDESYIRRVVMPLEVILTSYKRLVVK 315
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+M T+ MATCDHG
Sbjct: 316 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMPTAVMATCDHGA 375
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 376 VAKIKRVVMDRDTYPRKWGLGP 397
>gi|444317647|ref|XP_004179481.1| hypothetical protein TBLA_0C01470 [Tetrapisispora blattae CBS 6284]
gi|387512522|emb|CCH59962.1| hypothetical protein TBLA_0C01470 [Tetrapisispora blattae CBS 6284]
Length = 478
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNMVTLHDVLDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLITTKGEAIAVAIAQMSTVDLASCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|207343002|gb|EDZ70600.1| YLR175Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 387
Score = 210 bits (534), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 119 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 178
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 179 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 238
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 239 VASVKRCIMERDLYPRRWGLGP 260
>gi|448112515|ref|XP_004202116.1| Piso0_001595 [Millerozyma farinosa CBS 7064]
gi|359465105|emb|CCE88810.1| Piso0_001595 [Millerozyma farinosa CBS 7064]
Length = 479
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 212 MQELRRVRSGAMDENCNLVTLHDVMDAQYIYDNTRDESYLRKIIQPLETLLVGYKRVVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+ +AQMTT + +CDHGV
Sbjct: 272 DSAVNSVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAIGVAQMTTVDLQSCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRCIMERDTYPRRWGLGP 353
>gi|406694863|gb|EKC98182.1| centromere/microtubule binding protein cbf5 [Trichosporon asahii
var. asahii CBS 8904]
Length = 489
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA +LYD +DES LRRVI+PLE LL +KRI++K
Sbjct: 221 MQELRRVRSGITGEGDDIVTMHDVLDAQWLYDNTRDESYLRRVIKPLEALLTNYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+A+ +AQM+T+ +A+CDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRYEADIEVGEEVVLMTTKGEAIAVGIAQMSTADLASCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGPK+
Sbjct: 341 VAKVKRCIMNRDLYPRRWGLGPKA 364
>gi|224003359|ref|XP_002291351.1| hypothetical protein THAPSDRAFT_508 [Thalassiosira pseudonana
CCMP1335]
gi|220973127|gb|EED91458.1| hypothetical protein THAPSDRAFT_508 [Thalassiosira pseudonana
CCMP1335]
Length = 458
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D LVT+HD+ DA ++YD KDE LRRV+ PLE LL +KRI++K
Sbjct: 207 MQELRRVRSGVLDENDNLVTMHDVMDAQHVYDTTKDEKYLRRVVMPLETLLTNYKRIVVK 266
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ D I++++E+V+++TKGEA+A+ +AQMTT+ MATCDHGV
Sbjct: 267 DSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGV 326
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 327 VAKIKRVIMERDTYPRRWGLGP 348
>gi|323332315|gb|EGA73724.1| Cbf5p [Saccharomyces cerevisiae AWRI796]
Length = 291
Score = 209 bits (533), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 18 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 77
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 78 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 137
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 138 VASVKRCIMERDLYPRRWGLGP 159
>gi|126274082|ref|XP_001387815.1| nucleolar pseuduridine synthase and putative microtubule binding
protein [Scheffersomyces stipitis CBS 6054]
gi|126213685|gb|EAZ63792.1| nucleolar pseuduridine synthase and putative microtubule binding
protein [Scheffersomyces stipitis CBS 6054]
Length = 475
Score = 209 bits (533), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALGENDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQMTT + CDHGV
Sbjct: 272 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMTTVDLQGCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 332 VAKVKRCIMERDTYPRRWGLGP 353
>gi|332862028|ref|XP_521345.3| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
subunit 4 [Pan troglodytes]
Length = 516
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/135 (68%), Positives = 119/135 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYP 135
V KIKRVIM+RDTYP
Sbjct: 363 VPKIKRVIMERDTYP 377
>gi|422294938|gb|EKU22238.1| H/ACA ribonucleoprotein complex subunit 4 [Nannochloropsis gaditana
CCMP526]
Length = 498
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ +E D L+T+HD+ DA Y YD +KDES LRR + PLE L KR+++K
Sbjct: 234 MQELRRVRSGVLTENDHLMTMHDVLDAQYAYDTYKDESYLRRAVLPLEILFANTKRVVVK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ DGIE+++E+V+V+TKGEA+A+ +AQMTT+ MATCDHG+
Sbjct: 294 DSAVNAICYGARLMIPGLLRFADGIEVNDEVVMVTTKGEAIAVGIAQMTTAVMATCDHGM 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+M+RDTYPR+WGLGP
Sbjct: 354 VAKIKRVVMERDTYPRRWGLGP 375
>gi|8572671|gb|AAF77119.1|AF234319_1 Cbf5p [Euglena gracilis]
Length = 467
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E DG+VT+HD+ DAM+LYDQ DES LRR + P E LL +KR+++K
Sbjct: 219 MAELRRTRTGHLGENDGMVTMHDVLDAMHLYDQEGDESYLRRTVMPCELLLTAYKRVVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNA+CYGA++M+PG+LR+E+GIE++E IV+++TKGEA+AL +A MTT+ M TCDHG+
Sbjct: 279 DTAVNAICYGAKLMIPGLLRFENGIEVNEVIVLMTTKGEAIALGIALMTTADMGTCDHGI 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPR+WGLGP
Sbjct: 339 VAKIKRVVMDRDTYPRRWGLGP 360
>gi|403217428|emb|CCK71922.1| hypothetical protein KNAG_0I01310 [Kazachstania naganishii CBS
8797]
Length = 480
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DE+ LR +I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDEMVTLHDVLDAQWVYDNTRDETYLRNIIKPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYEDGIE+ +E+V+++TKGEA+A+A+AQM T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEDGIELYDEVVLITTKGEAIAVAIAQMATVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|119874633|gb|ABM05793.1| dyskerin [Phoronis vancouverensis]
Length = 241
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 117/127 (92%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++GLVT+HD+ DA + YD +KDE+ LRRVI+PLE LL GHKRI+LK
Sbjct: 115 MQELRRVRSGIQSEKEGLVTMHDVLDAQWQYDNNKDETYLRRVIKPLEALLTGHKRIVLK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRYEDGIE+++EIVI++TKGEAVALA+AQMTT+ MATCDHGV
Sbjct: 175 DSAVNAVCYGAKIMLPGVLRYEDGIEVNDEIVIITTKGEAVALAIAQMTTAVMATCDHGV 234
Query: 121 VAKIKRV 127
VAK+KRV
Sbjct: 235 VAKLKRV 241
>gi|7378766|emb|CAB85492.1| putative kinetochore protein [Hordeum vulgare subsp. vulgare]
Length = 405
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DAM+ D HKDES +RRV+ PLE +L +KR+++K
Sbjct: 256 MQELRRVRSGILGEQDNMVTMHDVMDAMWALDNHKDESYIRRVVMPLEVILTSYKRLVVK 315
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+M T+ MATCDHG
Sbjct: 316 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMPTAVMATCDHGA 375
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 376 VAKIKRVVMDRDTYPRKWGLGP 397
>gi|401885502|gb|EJT49616.1| centromere/microtubule binding protein cbf5 [Trichosporon asahii
var. asahii CBS 2479]
Length = 550
Score = 209 bits (532), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA +LYD +DES LRRVI+PLE LL +KRI++K
Sbjct: 221 MQELRRVRSGITGEGDDIVTMHDVLDAQWLYDNTRDESYLRRVIKPLEALLTNYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+A+ +AQM+T+ +A+CDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRYEADIEVGEEVVLMTTKGEAIAVGIAQMSTADLASCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGPK+
Sbjct: 341 VAKVKRCIMNRDLYPRRWGLGPKA 364
>gi|302652454|ref|XP_003018077.1| hypothetical protein TRV_07913 [Trichophyton verrucosum HKI 0517]
gi|291181682|gb|EFE37432.1| hypothetical protein TRV_07913 [Trichophyton verrucosum HKI 0517]
Length = 494
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIEIYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|255943739|ref|XP_002562637.1| Pc20g00750 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587372|emb|CAP85404.1| Pc20g00750 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 473
Score = 209 bits (531), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 121/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +G+VTLHD+ DA ++YD ++DES LR+VI PLE LL G+KRI++K
Sbjct: 219 MQELRRVRSGAMGEGEGMVTLHDVMDAQWVYDNNRDESYLRKVISPLESLLTGYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T + TCDHGV
Sbjct: 279 DSAVNAVCYGAKLMIPGLLRYEAGIECHEEVVLMTTKGEAIAIGIAQMSTVELTTCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGP +
Sbjct: 339 VAKVKRCIMERDLYPRRWGLGPTA 362
>gi|302501993|ref|XP_003012988.1| hypothetical protein ARB_00871 [Arthroderma benhamiae CBS 112371]
gi|291176549|gb|EFE32348.1| hypothetical protein ARB_00871 [Arthroderma benhamiae CBS 112371]
Length = 494
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIEIYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|169765275|ref|XP_001817109.1| centromere/microtubule-binding protein cbf5 [Aspergillus oryzae
RIB40]
gi|238503428|ref|XP_002382947.1| pseudouridylate synthase family protein [Aspergillus flavus
NRRL3357]
gi|83764963|dbj|BAE55107.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220690418|gb|EED46767.1| pseudouridylate synthase family protein [Aspergillus flavus
NRRL3357]
Length = 488
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA ++YD +DES LR+VI+PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENSGLVTLHDVLDAQWMYDNQRDESYLRKVIKPLETLLTSYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GI+++EE+V+++TKGEA+A+A+AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIDVNEEVVLMTTKGEAIAIAIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|320040868|gb|EFW22801.1| centromere/microtubule binding protein CBF5 [Coccidioides posadasii
str. Silveira]
Length = 490
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRV+RPLE LL +KR+++K
Sbjct: 218 MQELRRVRSGAMDEQDGMVTLHDVLDAQWMMDNNRDESYLRRVVRPLETLLTTYKRVVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 278 DSAVNAVCYGAKLMIPGLLRFEAGIEVHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 338 VAKVKRCIMERDLYPRRWGMGP 359
>gi|50289049|ref|XP_446954.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526263|emb|CAG59887.1| unnamed protein product [Candida glabrata]
Length = 474
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA +++D +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALSENDNMVTLHDVLDAQWVFDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +ATCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAVAIAQMSTVDLATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|357160222|ref|XP_003578695.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Brachypodium distachyon]
Length = 584
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ D+M+ D HKDES +RRV+ PLE +L +KR+++K
Sbjct: 258 MQELRRVRSGILGEQDNMVTMHDVMDSMWALDNHKDESYIRRVVMPLEVILTSYKRLVVK 317
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+M T+ MATCDHG
Sbjct: 318 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMPTAVMATCDHGA 377
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 378 VAKIKRVVMDRDTYPRKWGLGP 399
>gi|119182719|ref|XP_001242479.1| centromere/microtubule binding protein CBF5 [Coccidioides immitis
RS]
gi|392865377|gb|EAS31158.2| centromere/microtubule-binding protein cbf5 [Coccidioides immitis
RS]
Length = 490
Score = 209 bits (531), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRV+RPLE LL +KR+++K
Sbjct: 218 MQELRRVRSGAMDEQDGMVTLHDVLDAQWMMDNNRDESYLRRVVRPLETLLTTYKRVVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 278 DSAVNAVCYGAKLMIPGLLRFEAGIEVHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 338 VAKVKRCIMERDLYPRRWGMGP 359
>gi|326468874|gb|EGD92883.1| centromere/microtubule binding protein CBF5 [Trichophyton tonsurans
CBS 112818]
Length = 494
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIEIYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|296817373|ref|XP_002849023.1| centromere/microtubule-binding protein cbf5 [Arthroderma otae CBS
113480]
gi|238839476|gb|EEQ29138.1| centromere/microtubule-binding protein cbf5 [Arthroderma otae CBS
113480]
Length = 448
Score = 208 bits (530), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 177 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 237 DSAVNAVCYGAKLMIPGLLRFEAGIEVYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 296
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 297 VAKVKRCIMERDLYPRRWGMGP 318
>gi|327301387|ref|XP_003235386.1| centromere/microtubule binding protein CBF5 [Trichophyton rubrum
CBS 118892]
gi|326462738|gb|EGD88191.1| centromere/microtubule binding protein CBF5 [Trichophyton rubrum
CBS 118892]
Length = 494
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIEIYEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|323308015|gb|EGA61269.1| Cbf5p [Saccharomyces cerevisiae FostersO]
Length = 489
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+ QM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAITQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>gi|303319381|ref|XP_003069690.1| centromere/microtubule-binding protein cbf5, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109376|gb|EER27545.1| centromere/microtubule-binding protein cbf5, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 490
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRV+RPLE LL +KR+++K
Sbjct: 218 MQELRRVRSGAMDEQDGMVTLHDVLDAQWMMDNNRDESYLRRVVRPLETLLTTYKRVVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 278 DSAVNAVCYGAKLMIPGLLRFEAGIEVHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 338 VAKVKRCIMERDLYPRRWGMGP 359
>gi|145253867|ref|XP_001398446.1| centromere/microtubule-binding protein cbf5 [Aspergillus niger CBS
513.88]
gi|134084022|emb|CAL00560.1| unnamed protein product [Aspergillus niger]
Length = 485
Score = 208 bits (530), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA +LYD +DES LR+VI+PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENSGMVTLHDVLDAQWLYDNQRDESYLRKVIKPLETLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMVPGLLRFEAGIEVNEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|357136276|ref|XP_003569731.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like
[Brachypodium distachyon]
Length = 591
Score = 208 bits (530), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ D+M+ D HKDES +RRV+ PLE +L +KR+++K
Sbjct: 258 MQELRRVRSGILGEQDNMVTMHDVMDSMWALDNHKDESYIRRVVMPLEVILTSYKRLVVK 317
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+M T+ MATCDHG
Sbjct: 318 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMPTAVMATCDHGA 377
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 378 VAKIKRVVMDRDTYPRKWGLGP 399
>gi|398393878|ref|XP_003850398.1| hypothetical protein MYCGRDRAFT_74715 [Zymoseptoria tritici IPO323]
gi|339470276|gb|EGP85374.1| hypothetical protein MYCGRDRAFT_74715 [Zymoseptoria tritici IPO323]
Length = 486
Score = 208 bits (529), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++G+VTLHD DA +LYD +DES LR VI+PLE LL +KRI++K
Sbjct: 223 MQELRRVRSGAMDEKEGMVTLHDCLDAQWLYDNQRDESYLRTVIKPLETLLTTYKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+ALA+AQM+T +++CDHGV
Sbjct: 283 DSAVNAVCYGAKLMIPGLLRYESGIEVHEEVVLITTKGEAIALAIAQMSTVELSSCDHGV 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 343 VAKVKRCIMERDLYPRRWGMGP 364
>gi|119874625|gb|ABM05789.1| dyskerin [Echiurus echiurus]
Length = 241
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 100/127 (78%), Positives = 114/127 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D +VT+HD+ DA +++D HKDE LRRVI+PLE LLV HKRIILK
Sbjct: 115 MQELRRVRSGIQSETDRMVTMHDVLDAQFVHDHHKDEEYLRRVIKPLEALLVSHKRIILK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRYEDGIE+DE+IVIV+TKGEAVALA+AQMTT+ MATCDHG
Sbjct: 175 DSAVNAVCYGAKIMLPGVLRYEDGIEVDEQIVIVTTKGEAVALAIAQMTTAVMATCDHGQ 234
Query: 121 VAKIKRV 127
VAK+KRV
Sbjct: 235 VAKLKRV 241
>gi|226478530|emb|CAX72760.1| dyskeratosis congenita 1, dyskerin [Schistosoma japonicum]
Length = 459
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+R+G SE D LVT+HDI DA +LYD +DE+ LRRV+ PLE LLV HKRI+LK
Sbjct: 231 MEELRRSRTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVVMPLERLLVKHKRIMLK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 291 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAIALMTTATIATCDHGL 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RD YPR+WG GP
Sbjct: 351 VAKLKRVIMERDLYPRQWGRGP 372
>gi|56759202|gb|AAW27741.1| SJCHGC01561 protein [Schistosoma japonicum]
Length = 459
Score = 208 bits (529), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+R+G SE D LVT+HDI DA +LYD +DE+ LRRV+ PLE LLV HKRI+LK
Sbjct: 231 MEELRRSRTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVVMPLERLLVKHKRIMLK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 291 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAIALMTTATIATCDHGL 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RD YPR+WG GP
Sbjct: 351 VAKLKRVIMERDLYPRQWGRGP 372
>gi|226478554|emb|CAX72772.1| dyskeratosis congenita 1, dyskerin [Schistosoma japonicum]
gi|257205750|emb|CAX82526.1| dyskeratosis congenita 1, dyskerin [Schistosoma japonicum]
Length = 459
Score = 207 bits (528), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 95/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+R+G SE D LVT+HDI DA +LYD +DE+ LRRV+ PLE LLV HKRI+LK
Sbjct: 231 MEELRRSRTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVVMPLERLLVKHKRIMLK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 291 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAIALMTTATIATCDHGL 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RD YPR+WG GP
Sbjct: 351 VAKLKRVIMERDLYPRQWGRGP 372
>gi|400600982|gb|EJP68650.1| centromere/microtubule-binding protein cbf5 [Beauveria bassiana
ARSEF 2860]
Length = 826
Score = 207 bits (528), Expect = 8e-52, Method: Composition-based stats.
Identities = 95/142 (66%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + +D +DES LR+VI PLE LL +KR+++K
Sbjct: 565 MQELRRVRSGAMDESKQLVTLHDVLDAQWTHDNTRDESYLRKVISPLETLLTSYKRLVVK 624
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EEIV+++TKGEA+ALA AQM+T M+TCDHGV
Sbjct: 625 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEIVLMTTKGEAIALAYAQMSTVEMSTCDHGV 684
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 685 VAKVKRCIMERDLYPRRWGLGP 706
>gi|340374276|ref|XP_003385664.1| PREDICTED: centromere/microtubule-binding protein cbf5-like
[Amphimedon queenslandica]
Length = 491
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D LVT+HD+ DA + YD KDES LR+V++PLE LL HKR+++K
Sbjct: 226 MAELRRVRSGIQSENDDLVTMHDVLDAQWQYDNMKDESYLRKVVKPLEALLTSHKRLVIK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ LPGVLR+++GIE EIVI++ KGEAVAL +A ++T+ M TCDH
Sbjct: 286 DSAVNAICYGAKVQLPGVLRFDEGIEPKMEIVIMTPKGEAVALGIALLSTAEMVTCDHNS 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
AKIKRVIM RD YPRKWGLGPK+
Sbjct: 346 CAKIKRVIMSRDVYPRKWGLGPKA 369
>gi|358373317|dbj|GAA89916.1| pseudouridylate synthase family protein [Aspergillus kawachii IFO
4308]
Length = 486
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++YD +DES LR+VI+PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENSGMVTLHDVLDAQWMYDNQRDESYLRKVIKPLETLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMVPGLLRFEAGIEVNEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|256083755|ref|XP_002578104.1| centromere/microtubule binding protein cbf5 [Schistosoma mansoni]
Length = 414
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+++G SE D LVT+HDI DA +LYD +DE+ LRRVI PLE LL+ HKRI+LK
Sbjct: 227 MEELRRSKTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVIMPLEKLLIKHKRIMLK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 287 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAVALMTTATIATCDHGL 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRVIM+RD YPR+WG GP S
Sbjct: 347 VAKLKRVIMERDLYPRQWGRGPVS 370
>gi|366999504|ref|XP_003684488.1| hypothetical protein TPHA_0B03820 [Tetrapisispora phaffii CBS 4417]
gi|357522784|emb|CCE62054.1| hypothetical protein TPHA_0B03820 [Tetrapisispora phaffii CBS 4417]
Length = 478
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D +VTLHD+ DA ++YD +DES LR++I+PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGALGESDNMVTLHDVMDAQWVYDNTRDESYLRKIIQPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAVAIAQMSTVDLASCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 332 VATVKRCIMERDLYPRRWGLGP 353
>gi|255082488|ref|XP_002504230.1| predicted protein [Micromonas sp. RCC299]
gi|226519498|gb|ACO65488.1| predicted protein [Micromonas sp. RCC299]
Length = 477
Score = 207 bits (528), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 122/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D LVT+HD+ DAM+++D K E LRRV+ PLE LL +KR+++K
Sbjct: 249 MQELRRVRSGILGEKDNLVTMHDVMDAMWVHDNLKQEDYLRRVVMPLEVLLTNYKRVVVK 308
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+A+ +AQM T+ MATCDHG
Sbjct: 309 DSAVNAICYGAKLMIPGLLRYEAGIEVGEEVVLMTTKGEAIAVGIAQMNTAVMATCDHGC 368
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+M+RDTYPR+WGLGP +
Sbjct: 369 VAKIKRVVMERDTYPRRWGLGPTA 392
>gi|452841091|gb|EME43028.1| hypothetical protein DOTSEDRAFT_72429 [Dothistroma septosporum
NZE10]
Length = 499
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ +VTLHD DA +LYD +DES LR VI+PLE LL G+KRI++K
Sbjct: 217 MQELRRVRSGAMKEDETMVTLHDCLDAQWLYDNQRDESYLRTVIKPLETLLTGYKRIVVK 276
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+A+A+AQM+T +++CDHG+
Sbjct: 277 DSAVNAVCYGAKLMIPGLLRYESGIEVHEEVVLITTKGEAIAIAIAQMSTVELSSCDHGI 336
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 337 VAKVKRCIMERDLYPRRWGMGP 358
>gi|256083757|ref|XP_002578105.1| centromere/microtubule binding protein cbf5 [Schistosoma mansoni]
Length = 399
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+++G SE D LVT+HDI DA +LYD +DE+ LRRVI PLE LL+ HKRI+LK
Sbjct: 227 MEELRRSKTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVIMPLEKLLIKHKRIMLK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 287 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAVALMTTATIATCDHGL 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRVIM+RD YPR+WG GP S
Sbjct: 347 VAKLKRVIMERDLYPRQWGRGPVS 370
>gi|121712588|ref|XP_001273905.1| centromere/microtubule binding protein cbf5 [Aspergillus clavatus
NRRL 1]
gi|119402058|gb|EAW12479.1| centromere/microtubule binding protein cbf5 [Aspergillus clavatus
NRRL 1]
Length = 487
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +GLVTLHD+ DA ++YD +DES LRRVI PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENNGLVTLHDVLDAQWMYDNQRDESYLRRVISPLESLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GI+++EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIDVNEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 340 VAKVKRCIMERDLYPRRWGMGP 361
>gi|320587203|gb|EFW99683.1| centromere microtubule-binding protein cbf5 [Grosmannia clavigera
kw1407]
Length = 474
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +LYD +DES LR++I+PLE LL G+KR+++K
Sbjct: 218 MQELRRVRSGAMDETKDLVTLHDVLDAQWLYDNTRDESYLRKIIQPLESLLTGYKRLVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 278 DSAVNAVCYGAKLMLPGLLRYETGIEHHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 338 VAKVKRCIMERDLYPRRWGLGP 359
>gi|328872555|gb|EGG20922.1| pseudouridine synthase family protein [Dictyostelium fasciculatum]
Length = 554
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 122/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ G+VT+HD+KDA + ++ KDE+ LRRVI+PLE +L + RI++K
Sbjct: 233 MQELRRVRSGIMSEKVGMVTMHDVKDAQHEFENLKDETYLRRVIQPLEAVLTNYPRIVVK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE IE +E+V+++TKGEA+A+ +AQMTT+TMATCDHGV
Sbjct: 293 DSAINAICYGAKLMVPGLLRYEKDIEAGDEVVLITTKGEAIAIGIAQMTTATMATCDHGV 352
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRD YP KWGLGP +
Sbjct: 353 VATIKRVIMDRDVYPVKWGLGPNA 376
>gi|302761338|ref|XP_002964091.1| hypothetical protein SELMODRAFT_81986 [Selaginella moellendorffii]
gi|300167820|gb|EFJ34424.1| hypothetical protein SELMODRAFT_81986 [Selaginella moellendorffii]
Length = 530
Score = 207 bits (527), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SGI E+D LVT+HD+ DA ++YD +KDES LRRVI PLE LL + RI++K
Sbjct: 250 MQELRRVQSGILGEKDNLVTMHDVLDAQWVYDNYKDESYLRRVIMPLEVLLTNYPRIVVK 309
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR++ + + E+V+++TKGEA+AL +AQM+TS MATCDHGV
Sbjct: 310 DSAVNAICYGAKLMIPGLLRFDSKVGVGTEVVLMTTKGEAIALGIAQMSTSDMATCDHGV 369
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPRKWGLGP++
Sbjct: 370 VAKVKRVVMERDTYPRKWGLGPRA 393
>gi|302787318|ref|XP_002975429.1| hypothetical protein SELMODRAFT_232501 [Selaginella moellendorffii]
gi|300157003|gb|EFJ23630.1| hypothetical protein SELMODRAFT_232501 [Selaginella moellendorffii]
Length = 489
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 123/144 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SGI E+D LVT+HD+ DA ++YD +KDES LRRVI PLE LL + RI++K
Sbjct: 212 MQELRRVQSGILGEKDNLVTMHDVLDAQWVYDNYKDESYLRRVIMPLEVLLTNYPRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR++ + + E+V+++TKGEA+AL +AQM+TS MATCDHGV
Sbjct: 272 DSAVNAICYGAKLMIPGLLRFDSKVGVGTEVVLMTTKGEAIALGIAQMSTSDMATCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPRKWGLGP++
Sbjct: 332 VAKVKRVVMERDTYPRKWGLGPRA 355
>gi|302830414|ref|XP_002946773.1| hypothetical protein VOLCADRAFT_79364 [Volvox carteri f.
nagariensis]
gi|300267817|gb|EFJ51999.1| hypothetical protein VOLCADRAFT_79364 [Volvox carteri f.
nagariensis]
Length = 517
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 122/144 (84%), Gaps = 2/144 (1%)
Query: 1 MIELRRNRSGI--QSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRII 58
M ELRR RSGI +S + +VT+HD+ DA ++YD KDES LRR I PLE LL G KR++
Sbjct: 249 MQELRRVRSGIMGESPNNNMVTMHDVLDAQWIYDNFKDESYLRRAIMPLEVLLTGFKRVV 308
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+KDSAVNA+CYGA++M+PG+LR+E GIE+D+EIV+++TKGEA+A+ +AQMTT+ MAT DH
Sbjct: 309 VKDSAVNAICYGAKLMIPGLLRFESGIEVDDEIVLMTTKGEAIAVGIAQMTTAVMATVDH 368
Query: 119 GVVAKIKRVIMDRDTYPRKWGLGP 142
G VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 369 GCVAKIKRVIMERDTYPRRWGLGP 392
>gi|449301354|gb|EMC97365.1| hypothetical protein BAUCODRAFT_121823 [Baudoinia compniacensis
UAMH 10762]
Length = 502
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++G+VTLHD+ DA +L+D +DES LR VI+PLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEQEGMVTLHDVLDAQWLHDNQRDESYLRTVIKPLETLLTTYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+ALA+AQM+T +++CDHGV
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRYEAGIEVHEEVVLITTKGEAIALAIAQMSTVELSSCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 341 VAKVKRCIMERDLYPRRWGMGP 362
>gi|392573646|gb|EIW66785.1| hypothetical protein TREMEDRAFT_40777, partial [Tremella
mesenterica DSM 1558]
Length = 500
Score = 207 bits (526), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 120/144 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA +LYD +DES LRRVIRPLE LL KRI++K
Sbjct: 235 MQELRRVRSGITGENDDIVTMHDVLDAQWLYDNTRDESYLRRVIRPLESLLTNFKRIVVK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+A+ +A M+T +A+CDHGV
Sbjct: 295 DSAVNAVCYGAKLMIPGLLRYEADIEVHEEVVLMTTKGEAIAIGIAMMSTVDLASCDHGV 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGPK+
Sbjct: 355 VAKVKRCIMNRDLYPRRWGLGPKA 378
>gi|119874635|gb|ABM05794.1| dyskerin [Priapulus caudatus]
Length = 233
Score = 206 bits (525), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/127 (77%), Positives = 112/127 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+D LVT+HD+ DA +LYD HKDES LRRVI PLE LL HKR+ILK
Sbjct: 107 MQELRRVRSGILSEQDNLVTMHDVMDAQWLYDNHKDESYLRRVISPLEKLLTSHKRVILK 166
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPGVLRYEDGIE+++EIVIV+TKGE VALA+A MTT+ MATCDHGV
Sbjct: 167 DSAVNAVCYGAKVMLPGVLRYEDGIELNQEIVIVTTKGEGVALAIALMTTAVMATCDHGV 226
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 227 VAKIKRV 233
>gi|340904971|gb|EGS17339.1| centromere/microtubule binding protein cbf5-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1010
Score = 206 bits (525), Expect = 2e-51, Method: Composition-based stats.
Identities = 91/143 (63%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG+ SE+DG LVTLHD+ DA + YD + DE+LLR+VI+PLE LL +KR+++
Sbjct: 752 MQELRRVRSGVMSEDDGSLVTLHDVLDAQWQYDNNGDEALLRKVIQPLETLLCTYKRLVV 811
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KD+AVNAVCYGA++M+PG+LRY+ GIE EE+V+++TKGEA+A+A+AQM +ATCDHG
Sbjct: 812 KDTAVNAVCYGAKLMIPGLLRYDQGIEQGEEVVLMTTKGEAIAIAIAQMGAVELATCDHG 871
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 872 CVAKVKRCIMERDLYPRRWGMGP 894
>gi|397574046|gb|EJK48998.1| hypothetical protein THAOC_32164 [Thalassiosira oceanica]
Length = 453
Score = 206 bits (524), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 123/141 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ +E+D LVT+HD+ DA +++D KDE LRRV+ PLE LL +KR+++K
Sbjct: 262 MQELRRVRSGVMAEKDNLVTMHDVMDAQHVFDTTKDEKYLRRVVMPLEVLLTNYKRVVVK 321
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ D I++++E+V+++TKGEA+A+ +AQMTT+ MATCDHGV
Sbjct: 322 DSAVNAICYGAKLMIPGLLRFADDIDINQEVVLMTTKGEAIAVGIAQMTTAVMATCDHGV 381
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
VAKIKRVIM+RDTYPR+WGLG
Sbjct: 382 VAKIKRVIMERDTYPRRWGLG 402
>gi|402222167|gb|EJU02234.1| centromere/microtubule binding protein cbf5 [Dacryopinax sp.
DJM-731 SS1]
Length = 494
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 121/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LL G+KRI++K
Sbjct: 227 MEELRRVRSGALSENDEMVTMHDVLDAQWVYDNTRDESYLRRVIRPLECLLTGYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+AL +A M+T +ATCDHGV
Sbjct: 287 DSAVTAVCYGAKLMIPGLLRYEADIEVHEEVVLMTTKGEAIALGIALMSTVELATCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGPK+
Sbjct: 347 VAKVKRCIMERDLYPRRWGLGPKA 370
>gi|341878882|gb|EGT34817.1| hypothetical protein CAEBREN_15909 [Caenorhabditis brenneri]
Length = 442
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI E + +VT+HD+ DA Y+ D KDES +R ++RPLE LL HKR+++K
Sbjct: 231 MQELRRNRSGICDENENMVTMHDVLDAQYILDTQKDESYMRHIVRPLEALLTQHKRVVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS +NA+CYGA+I++PGVLRY+D IE+++EIVI++TKGEA+ +A+AQM+TST+A+ DHGV
Sbjct: 291 DSCINAICYGAKILIPGVLRYDDDIEVNKEIVIMTTKGEAICIAIAQMSTSTIASVDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK KRVIM+RD Y RKWGLGP
Sbjct: 351 VAKSKRVIMERDVYGRKWGLGP 372
>gi|451854343|gb|EMD67636.1| hypothetical protein COCSADRAFT_34430 [Cochliobolus sativus ND90Pr]
gi|451999418|gb|EMD91880.1| hypothetical protein COCHEDRAFT_1133778 [Cochliobolus
heterostrophus C5]
Length = 495
Score = 206 bits (523), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +LYD ++DE+ LR+VI PLE LL+ +KR+++K
Sbjct: 219 MQELRRVRSGAMDETKDLVTLHDVLDAQWLYDNNRDEAYLRKVISPLESLLMSYKRVVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++MLPG+LR+E GIE+ EEIV+++TKGEA+ALA AQM+ M+TCDHGV
Sbjct: 279 DSSVNAICYGAKLMLPGLLRFEKGIEIHEEIVLMTTKGEAIALAYAQMSAVEMSTCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YPR+WG+GP
Sbjct: 339 VAKIKRVIMERDLYPRRWGMGP 360
>gi|308497718|ref|XP_003111046.1| hypothetical protein CRE_04622 [Caenorhabditis remanei]
gi|308242926|gb|EFO86878.1| hypothetical protein CRE_04622 [Caenorhabditis remanei]
Length = 444
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI E + +VT+HD+ DA YL D KDES +R ++RPLE LL HKR+++K
Sbjct: 231 MQELRRNRSGICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA+I++PGVLRY+D IE+ +EIVI++TKGEAV +A+AQM+TST+A+ DHG+
Sbjct: 291 DSCVNAICYGAKILIPGVLRYDDDIEVGKEIVIMTTKGEAVCIAIAQMSTSTIASVDHGI 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK KRVIM+RD Y RKWGLGP
Sbjct: 351 VAKSKRVIMERDVYGRKWGLGP 372
>gi|403414199|emb|CCM00899.1| predicted protein [Fibroporia radiculosa]
Length = 498
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 120/144 (83%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LL+G+KRI++K
Sbjct: 208 MQELRRVRSGALSENDSMVTMHDVLDAQWVYDNTRDESYLRRVIRPLESLLIGYKRIVVK 267
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I ++EE+ GEA+ALA+AQM+T +ATCDHGV
Sbjct: 268 DSAVNAVCYGAKLMIPGLLRYEADISLNEEVDNF-FPGEAIALAIAQMSTVELATCDHGV 326
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RDTYPR+WGLGPK+
Sbjct: 327 VAKVKRCIMERDTYPRRWGLGPKA 350
>gi|226478088|emb|CAX72737.1| dyskeratosis congenita 1, dyskerin [Schistosoma japonicum]
Length = 459
Score = 206 bits (523), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+R+G SE D LVT+HDI DA +LYD +DE+ LRRV+ PLE LLV HKRI+LK
Sbjct: 231 MEELRRSRTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVVMPLERLLVKHKRIMLK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 291 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAIALMTTATIATCDHGL 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+ D YPR+WG GP
Sbjct: 351 VAKLKRVIMEHDLYPRQWGRGP 372
>gi|119874637|gb|ABM05795.1| dyskerin [Sabella pavonina]
Length = 229
Score = 205 bits (522), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 114/127 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+DGL+T+HD+ DA +L D KDES LRRVI+PLE LLV HKRIILK
Sbjct: 103 MQELRRVRSGIQSEKDGLMTMHDVLDAQWLLDNRKDESYLRRVIKPLEALLVSHKRIILK 162
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPGVLRY+DGIE+++EIVIV+TKGEAVALALAQMTT +ATCDHG
Sbjct: 163 DSAVNAVCYGAKIMLPGVLRYDDGIEVNDEIVIVTTKGEAVALALAQMTTPVIATCDHGQ 222
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 223 VAKIKRV 229
>gi|125586407|gb|EAZ27071.1| hypothetical protein OsJ_11000 [Oryza sativa Japonica Group]
Length = 593
Score = 205 bits (522), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + D DES LRR++ PLE LL +KR+++K
Sbjct: 263 MQELRRVRSGILGETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVK 322
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE+ EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 323 DSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 382
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 383 VAKIKRVVMDRDTYPRKWGLGP 404
>gi|17553978|ref|NP_499370.1| Protein K01G5.5 [Caenorhabditis elegans]
gi|3914150|sp|O17919.1|DKC1_CAEEL RecName: Full=Putative H/ACA ribonucleoprotein complex subunit 4
gi|3924791|emb|CAB07244.1| Protein K01G5.5 [Caenorhabditis elegans]
Length = 445
Score = 205 bits (521), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI E + +VT+HD+ DA YL D KDES +R ++RPLE LL HKR+++K
Sbjct: 231 MQELRRNRSGICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS +NA+CYGA+I++PG+LRY+D IE+ +EIVI+STKGEA+ +A+AQM TST+A+ DHGV
Sbjct: 291 DSCINAICYGAKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK KRVIM+RD Y RKWGLGP
Sbjct: 351 VAKSKRVIMERDVYGRKWGLGP 372
>gi|453084115|gb|EMF12160.1| putative rRNA pseudouridine synthase [Mycosphaerella populorum
SO2202]
Length = 499
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG E+DG +VTLHD DA YLYD +DES LR VI+PLE LL +KRI++
Sbjct: 224 MQELRRVRSGAMKEDDGNMVTLHDCLDAQYLYDNQRDESYLRTVIQPLETLLTTYKRIVV 283
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+ALA+AQM+T +++CDHG
Sbjct: 284 KDSAVNAVCYGAKLMIPGLLRYEAGIEVYEEVVLMTTKGEAIALAIAQMSTVELSSCDHG 343
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WG+GP
Sbjct: 344 VVAKVKRCIMERDLYPRRWGMGP 366
>gi|115473585|ref|NP_001060391.1| Os07g0636000 [Oryza sativa Japonica Group]
gi|23237811|dbj|BAC16386.1| putative centromere/microtubule binding protein [Oryza sativa
Japonica Group]
gi|113611927|dbj|BAF22305.1| Os07g0636000 [Oryza sativa Japonica Group]
gi|125559298|gb|EAZ04834.1| hypothetical protein OsI_27012 [Oryza sativa Indica Group]
gi|125601221|gb|EAZ40797.1| hypothetical protein OsJ_25275 [Oryza sativa Japonica Group]
gi|215734843|dbj|BAG95565.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 600
Score = 205 bits (521), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 121/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E+D +VT+HD+ DA + D + DE+ LRR++ PLE LL +KR+++K
Sbjct: 257 MQELRRVRSGILGEQDNMVTMHDVMDARWAMDNYNDETYLRRIVMPLEVLLTSYKRLVVK 316
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 317 DSAVNAICYGAKLMIPGLLRFENDIDVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 376
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 377 VAKIKRVVMDRDTYPRKWGLGP 398
>gi|385304244|gb|EIF48269.1| centromere microtubule-binding protein cbf5 [Dekkera bruxellensis
AWRI1499]
Length = 489
Score = 204 bits (520), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E D +VTLHD+ DA ++YD KDE+ LR+VI PLE LLVG+KRI++K
Sbjct: 212 MQELRRVRSGQLTENDNMVTLHDVMDAQWVYDNSKDETYLRKVISPLETLLVGYKRIVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE I++ +E+V+++TKGEA+A+ +AQM+T + TCDHGV
Sbjct: 272 DSAVNAVCYGAKLMIPGLLRYEKNIDLYDEVVMITTKGEAIAIGIAQMSTVDLTTCDHGV 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RDTYPRKWG+GP
Sbjct: 332 VATVKRCIMERDTYPRKWGVGP 353
>gi|358389708|gb|EHK27300.1| hypothetical protein TRIVIDRAFT_73212 [Trichoderma virens Gv29-8]
Length = 487
Score = 204 bits (520), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 117/142 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + +D +DES LRRVI PLE LL G+KR+++K
Sbjct: 224 MQELRRVRSGAMDETKHLVTLHDVLDAQWTHDNTRDESYLRRVIAPLETLLTGYKRLVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 284 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 344 VAKVKRCIMERDLYPRRWGLGP 365
>gi|115453197|ref|NP_001050199.1| Os03g0370500 [Oryza sativa Japonica Group]
gi|12039350|gb|AAG46137.1|AC082644_19 putative centromere/microtubule binding protein [Oryza sativa
Japonica Group]
gi|108708379|gb|ABF96174.1| H/ACA ribonucleoprotein complex subunit 4, putative, expressed
[Oryza sativa Japonica Group]
gi|113548670|dbj|BAF12113.1| Os03g0370500 [Oryza sativa Japonica Group]
gi|215693252|dbj|BAG88634.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 591
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + D DES LRR++ PLE LL +KR+++K
Sbjct: 261 MQELRRVRSGILGETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVK 320
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE+ EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 321 DSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 380
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 381 VAKIKRVVMDRDTYPRKWGLGP 402
>gi|119874615|gb|ABM05784.1| dyskerin [Leptochiton sp. SJB-2006]
Length = 241
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 113/127 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++G VT+HD+ DA + YD HKDE LRRVI+PLE LLV HKR+ILK
Sbjct: 115 MQELRRVRSGIQSEKEGCVTMHDVLDAQWQYDNHKDEEYLRRVIKPLEALLVSHKRLILK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NAVCYGA+IMLPGVLRY+DGIE+++EIVIV+TKGEA+AL +AQMTT+ MATCDHG+
Sbjct: 175 DSAINAVCYGAKIMLPGVLRYQDGIELNDEIVIVTTKGEAIALGIAQMTTAVMATCDHGI 234
Query: 121 VAKIKRV 127
AKIKRV
Sbjct: 235 AAKIKRV 241
>gi|429859279|gb|ELA34067.1| centromere microtubule binding protein cbf5 [Colletotrichum
gloeosporioides Nara gc5]
Length = 471
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++ D +DES LR+VI PLE LL G+KRI++K
Sbjct: 235 MQELRRVRSGAMDESQGMVTLHDVLDAQWMMDNTRDESYLRKVISPLETLLTGYKRIVVK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ +E+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 295 DSAVNAVCYGAKLMLPGLLRYESAIEVHDEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 355 VAKVKRCIMERDLYPRRWGLGP 376
>gi|218192913|gb|EEC75340.1| hypothetical protein OsI_11751 [Oryza sativa Indica Group]
Length = 535
Score = 204 bits (520), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + D DES LRR++ PLE LL +KR+++K
Sbjct: 244 MQELRRVRSGILGETDNMVTMHDVMDARWAMDNFNDESYLRRIVMPLEVLLTSYKRLVVK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ IE+ EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 304 DSAVNAICYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 364 VAKIKRVVMDRDTYPRKWGLGP 385
>gi|302421366|ref|XP_003008513.1| centromere/microtubule-binding protein CBF5 [Verticillium
albo-atrum VaMs.102]
gi|261351659|gb|EEY14087.1| centromere/microtubule-binding protein CBF5 [Verticillium
albo-atrum VaMs.102]
Length = 459
Score = 204 bits (519), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LRRVI PLE LL +KR+++K
Sbjct: 202 MQELRRVRSGAMDENKGLVTLHDVLDAQWTMDNTRDESYLRRVISPLETLLTSYKRVVVK 261
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ +E+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 262 DSAVNAVCYGAKLMLPGLLRYESEIEVHDEVVMMTTKGEAIALGIAQMSTVEMSTCDHGV 321
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKR IM+RD YPRKWGLGP++
Sbjct: 322 VAKIKRCIMERDLYPRKWGLGPQA 345
>gi|340522839|gb|EGR53072.1| predicted protein [Trichoderma reesei QM6a]
Length = 484
Score = 204 bits (519), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + D +DES LRRVI+PLE LL+G+KR+++K
Sbjct: 221 MQELRRVRSGAMDETKHLVTLHDVLDAQWTMDNTRDESYLRRVIKPLETLLLGYKRLVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 281 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 341 VAKVKRCIMERDLYPRRWGLGP 362
>gi|303281684|ref|XP_003060134.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458789|gb|EEH56086.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 496
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D L T+HD+ DAM++ D K E LRRVI PLE LL +KR+++K
Sbjct: 261 MQELRRVRSGILGENDNLCTMHDVMDAMWVNDNLKQEDYLRRVIMPLEVLLTNYKRVVVK 320
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRY GIE+ EE+V+++TKGEA+A+ +AQM T+ MATCDHG
Sbjct: 321 DSAVNAICYGAKLMIPGLLRYASGIEVGEEVVLMTTKGEAIAVGVAQMNTAVMATCDHGC 380
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+M+RDTYPR+WGLGP +
Sbjct: 381 VAKIKRVVMERDTYPRRWGLGPTA 404
>gi|406864846|gb|EKD17889.1| centromere/microtubule binding protein CBF5 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 503
Score = 204 bits (519), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++ D +DES LRRVI PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDETKGMVTLHDVLDAQWMQDNTRDESYLRRVISPLETLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ EE+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRYESGIEVHEEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 340 VAKVKRCIMERDLYPRRWGLGP 361
>gi|346974692|gb|EGY18144.1| centromere/microtubule-binding protein cbf5 [Verticillium dahliae
VdLs.17]
Length = 484
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/144 (65%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LRRVI PLE LL +KR+++K
Sbjct: 227 MQELRRVRSGAMDENKGLVTLHDVLDAQWTMDNTRDESYLRRVISPLETLLTSYKRVVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ +E+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 287 DSAVNAVCYGAKLMLPGLLRYESEIEVHDEVVMMTTKGEAIALGIAQMSTVEMSTCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKR IM+RD YPRKWGLGP++
Sbjct: 347 VAKIKRCIMERDLYPRKWGLGPQA 370
>gi|340505835|gb|EGR32121.1| hypothetical protein IMG5_095360 [Ichthyophthirius multifiliis]
Length = 439
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 121/144 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E LVT+HD+KD+++ Y+ +KD+S LR+V+ P E LL RI++K
Sbjct: 255 MEELRRVRSGIMDENKYLVTMHDVKDSIWRYENYKDDSYLRKVVIPQEVLLTNFPRIVVK 314
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VN++CYGA++MLPGVLRY++GIE+ +EIV+++TKGEAVA+A+AQM TS +ATCDHGV
Sbjct: 315 DSTVNSICYGAKLMLPGVLRYDNGIELGKEIVLITTKGEAVAVAIAQMQTSELATCDHGV 374
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK KRV+MDRD YP++WGLGP+S
Sbjct: 375 VAKTKRVVMDRDLYPKRWGLGPRS 398
>gi|346319924|gb|EGX89525.1| centromere/microtubule binding protein CBF5 [Cordyceps militaris
CM01]
Length = 486
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/142 (67%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + +D +DES LRRVI PLE LL +KR+++K
Sbjct: 223 MQELRRVRSGAMHEGKQLVTLHDVLDAQWTHDNTRDESYLRRVISPLETLLTSYKRLVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EEIV+++TKGEA+ALA AQM+T M+TCDHGV
Sbjct: 283 DSAVNAVCYGAKLMLPGLLRYEAGIEHHEEIVLMTTKGEAIALAYAQMSTVEMSTCDHGV 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 343 VAKVKRCIMERDLYPRRWGLGP 364
>gi|268574684|ref|XP_002642321.1| Hypothetical protein CBG18316 [Caenorhabditis briggsae]
gi|67460235|sp|Q60YA8.1|DKC1_CAEBR RecName: Full=Putative H/ACA ribonucleoprotein complex subunit 4
Length = 445
Score = 204 bits (518), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI E + +VT+HD+ DA Y+ D KDES +R ++RPLE LL HKR+++K
Sbjct: 231 MQELRRNRSGICDENENMVTMHDVLDAQYMLDTQKDESYMRHIVRPLEALLTQHKRVVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA+I++PG+LRY+D IE+ +EIVI++TKGEA+ +A+AQM+TST+A+ DHG+
Sbjct: 291 DSCVNAICYGAKILIPGILRYDDDIEVGKEIVIMTTKGEAICIAIAQMSTSTIASVDHGI 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK KRVIM+RD Y RKWGLGP
Sbjct: 351 VAKSKRVIMERDVYGRKWGLGP 372
>gi|367024169|ref|XP_003661369.1| hypothetical protein MYCTH_2090056 [Myceliophthora thermophila ATCC
42464]
gi|347008637|gb|AEO56124.1| hypothetical protein MYCTH_2090056 [Myceliophthora thermophila ATCC
42464]
Length = 490
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/143 (65%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG+ SE+DG +VTLHD+ DA + YD DE+LLR+VI+PLE LL +KR+++
Sbjct: 227 MQELRRVRSGVMSEDDGTMVTLHDVLDAQWQYDNGGDETLLRKVIQPLETLLCTYKRLVV 286
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++MLPG+LRY+ GIE EE+V+++TKGEA+A+ +AQM+T M TCDHG
Sbjct: 287 KDSAVNAVCYGAKLMLPGLLRYDPGIEAHEEVVLMTTKGEAIAIGIAQMSTVEMTTCDHG 346
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WGLGP
Sbjct: 347 VVAKVKRCIMERDLYPRRWGLGP 369
>gi|396494996|ref|XP_003844439.1| similar to centromere/microtubule-binding protein cbf5
[Leptosphaeria maculans JN3]
gi|312221019|emb|CBY00960.1| similar to centromere/microtubule-binding protein cbf5
[Leptosphaeria maculans JN3]
Length = 488
Score = 203 bits (517), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +L+D ++DES LR+VI PLE LL+ +KRI++K
Sbjct: 219 MQELRRVRSGAMDETKDLVTLHDVLDAQWLHDNNRDESYLRKVIAPLESLLMSYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++MLPG+LR+E GIE+ EE+V+++TKGEA+ALA AQM+ M++CDHGV
Sbjct: 279 DSSVNAICYGAKLMLPGLLRFEKGIEIHEEVVLMTTKGEAIALAYAQMSAVEMSSCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YPR+WG+GP
Sbjct: 339 VAKIKRVIMERDLYPRRWGMGP 360
>gi|257206120|emb|CAX82711.1| dyskeratosis congenita 1, dyskerin [Schistosoma japonicum]
Length = 459
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M EL+R+R+ SE+D LVT+HDI DA +LYD +DE+ LRRV+ PLE LLV HKRI+LK
Sbjct: 231 MEELQRSRTVFMSEKDNLVTMHDILDAKWLYDNRRDETYLRRVVMPLERLLVKHKRIMLK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C+GA++MLPGVLRY++ I +++EIV+++TKGEAVALA+A MTT+T+ATCDHG+
Sbjct: 291 DTAVCAICFGAKLMLPGVLRYDNDINVNDEIVLMTTKGEAVALAIALMTTATIATCDHGL 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KRVIM+RD YPR+WG GP
Sbjct: 351 VAKLKRVIMERDLYPRQWGRGP 372
>gi|159490678|ref|XP_001703300.1| centromere/microtubule binding protein [Chlamydomonas reinhardtii]
gi|158280224|gb|EDP05982.1| centromere/microtubule binding protein [Chlamydomonas reinhardtii]
Length = 435
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/144 (64%), Positives = 119/144 (82%), Gaps = 2/144 (1%)
Query: 1 MIELRRNRSGIQSE--EDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRII 58
M ELRR RSGI E + +VT+HD+ DA +LYD KDES LRR + PLE LL KR++
Sbjct: 220 MQELRRVRSGIMGEAPSNNMVTMHDVLDAQWLYDNFKDESYLRRAVMPLEVLLTSFKRLV 279
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+KDSAVNA+CYGA++M+PG+LR+E G+E+D+E+V+++TKGEAVA+ +AQMTT MAT DH
Sbjct: 280 VKDSAVNAICYGAKLMIPGLLRFESGVEVDDEVVLMTTKGEAVAVGIAQMTTGVMATVDH 339
Query: 119 GVVAKIKRVIMDRDTYPRKWGLGP 142
G VAKIKRVIM+RDTYPR+WGLGP
Sbjct: 340 GCVAKIKRVIMERDTYPRRWGLGP 363
>gi|218192912|gb|EEC75339.1| hypothetical protein OsI_11747 [Oryza sativa Indica Group]
Length = 563
Score = 203 bits (516), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
+ ELRR RSGI E D +VT+HD+ DA + D DES LR ++ PLE LL +KR+++K
Sbjct: 231 LAELRRVRSGILGETDNMVTMHDVMDARWAMDNFNDESYLRHIVMPLEVLLTSYKRLVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E+ IE+ EE+V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 291 DSAVNAVCYGAKLMIPGLLRFENEIEVGEEVVLMTTKGEAIAIGIAEMTTAVMATCDHGA 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRV+MDRDTYPRKWGLGP
Sbjct: 351 VAKIKRVVMDRDTYPRKWGLGP 372
>gi|322701225|gb|EFY92975.1| hypothetical protein MAC_00758 [Metarhizium acridum CQMa 102]
Length = 487
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + D +DES LRRVI PLE LL G+KR+++K
Sbjct: 223 MQELRRVRSGAMDENKHLVTLHDVLDAQWTMDNTRDESYLRRVIAPLETLLTGYKRLVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 283 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 343 VAKVKRCIMERDLYPRRWGLGP 364
>gi|67903728|ref|XP_682120.1| CBF5_EMENI Centromere/microtubule binding protein CBF5
(Centromere-binding factor 5) (Nucleolar protein CBF5)
[Aspergillus nidulans FGSC A4]
gi|40740949|gb|EAA60139.1| CBF5_EMENI Centromere/microtubule binding protein CBF5
(Centromere-binding factor 5) (Nucleolar protein CBF5)
[Aspergillus nidulans FGSC A4]
Length = 490
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/151 (61%), Positives = 122/151 (80%), Gaps = 9/151 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE +G+VTLHD+ DA +LYD +DES LR+VI+PLE LL +KRI++K
Sbjct: 215 MQELRRVRSGAMSENEGMVTLHDVLDAQWLYDNQRDESYLRKVIKPLESLLTTYKRIVVK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRY---------EDGIEMDEEIVIVSTKGEAVALALAQMTTS 111
DSAVNAVCYGA++M+PG+LR+ E GIE+ EE+V+++TKGEA+A+ +AQM+T
Sbjct: 275 DSAVNAVCYGAKLMIPGLLRFGQKSLTWGLEAGIELGEEVVLMTTKGEAIAIGIAQMSTV 334
Query: 112 TMATCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
++TCDHGVVAK+KR IM+RD YPR+WGLGP
Sbjct: 335 ELSTCDHGVVAKVKRCIMERDLYPRRWGLGP 365
>gi|358401374|gb|EHK50680.1| hypothetical protein TRIATDRAFT_129766 [Trichoderma atroviride IMI
206040]
Length = 487
Score = 202 bits (515), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/142 (66%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA + D +DES LRRVI PLE LL G+KR+++K
Sbjct: 224 MQELRRVRSGAMDETKHLVTLHDVLDAQWTMDNTRDESYLRRVIAPLETLLTGYKRLVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ +AQM+T M+TCDHGV
Sbjct: 284 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 344 VAKVKRCIMERDLYPRRWGLGP 365
>gi|310792416|gb|EFQ27943.1| TruB family pseudouridylate synthase [Glomerella graminicola
M1.001]
Length = 473
Score = 202 bits (514), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 117/142 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA + D +DES LR+VI PLE LL G+KRI++K
Sbjct: 208 MQELRRVRSGAMDETKGMVTLHDVLDAQWTMDNTRDESYLRKVISPLETLLTGYKRIVVK 267
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ +E+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 268 DSAVNAVCYGAKLMLPGLLRYESEIEVHDEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 327
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 328 VAKVKRCIMERDLYPRRWGLGP 349
>gi|367037043|ref|XP_003648902.1| hypothetical protein THITE_2106879 [Thielavia terrestris NRRL 8126]
gi|346996163|gb|AEO62566.1| hypothetical protein THITE_2106879 [Thielavia terrestris NRRL 8126]
Length = 487
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG+ SE+DG +VTLHD+ DA + YD DES LR+VI+PLE LL +KR+++
Sbjct: 221 MQELRRVRSGVMSEDDGSMVTLHDVLDAQWQYDNSGDESYLRKVIQPLETLLCTYKRLVV 280
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++MLPG+LRY+ GI+ EE+V+++TKGEA+A+ +AQM+T M+TCDHG
Sbjct: 281 KDSAVNAVCYGAKLMLPGLLRYDAGIDAHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHG 340
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WGLGP
Sbjct: 341 VVAKVKRCIMERDLYPRRWGLGP 363
>gi|256251502|emb|CAR63654.1| putative H/ACA ribonucleoprotein complex subunit 4 [Angiostrongylus
cantonensis]
Length = 162
Score = 202 bits (514), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 112/125 (89%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
LVTLHD+ DA Y+ D HKDE+ +R+++RPLE LLV HKRII+KDS+VNA+CYGA+I+LPG
Sbjct: 2 LVTLHDVLDAQYVLDHHKDETYMRKIVRPLEALLVQHKRIIVKDSSVNAICYGAKILLPG 61
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRK 137
VLRY+DGIE+ +EIVIVSTKGEA+ LA+AQMTTSTMA+ DHGVVAK KRVIM+RD Y RK
Sbjct: 62 VLRYDDGIEVGQEIVIVSTKGEAICLAIAQMTTSTMASTDHGVVAKSKRVIMERDVYGRK 121
Query: 138 WGLGP 142
WGLGP
Sbjct: 122 WGLGP 126
>gi|308800054|ref|XP_003074808.1| Cbf5 H/ACA ribonucleoprotein complex subunit, nucleolar pseudour
(IC) [Ostreococcus tauri]
gi|119358799|emb|CAL52066.2| Cbf5 H/ACA ribonucleoprotein complex subunit, nucleolar pseudour
(IC), partial [Ostreococcus tauri]
Length = 403
Score = 202 bits (513), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE L T+HD+ DAM+ D KD+ +RRV+ PLE LL +KRI++K
Sbjct: 211 MQELRRVRSGICSEAKNLSTMHDVLDAMWASDNLKDDGYIRRVVMPLEVLLTNYKRIVIK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++MLPG+LRYE GIE+ E ++++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 271 DSAVNAICYGAKLMLPGLLRYEAGIEVGNECILMTTKGEAIAIGIAEMTTAVMATCDHGS 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPR+WGLGP S
Sbjct: 331 VAKVKRVVMERDTYPRRWGLGPNS 354
>gi|342875987|gb|EGU77652.1| hypothetical protein FOXB_11827 [Fusarium oxysporum Fo5176]
Length = 487
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LR+VI PLE LL +KR+++K
Sbjct: 226 MQELRRVRSGAMDESKGLVTLHDVLDAQWQMDNTRDESYLRKVISPLETLLTSYKRLVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 286 DSAVNAVCYGAKLMLPGLLRYESAIEHHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 346 VAKVKRCIMERDLYPRRWGLGP 367
>gi|119874643|gb|ABM05798.1| dyskerin [Phascolion strombus]
Length = 235
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 114/127 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+D +T+HD+ DA ++YD HKDE+ LRRVI+PLE LL HKRIILK
Sbjct: 109 MQELRRVRSGIQSEKDETMTMHDVMDAQWVYDHHKDETYLRRVIKPLEALLTSHKRIILK 168
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNAVCYGA+IMLPGVLRY+DGIE+++EI IV+TKGEAVALA+AQMTT+ +ATCDHG+
Sbjct: 169 DTAVNAVCYGAKIMLPGVLRYDDGIEINDEIAIVTTKGEAVALAIAQMTTAVIATCDHGM 228
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 229 VAKIKRV 235
>gi|330934014|ref|XP_003304379.1| hypothetical protein PTT_16958 [Pyrenophora teres f. teres 0-1]
gi|311319015|gb|EFQ87515.1| hypothetical protein PTT_16958 [Pyrenophora teres f. teres 0-1]
Length = 499
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +L+D ++DE+ LR+VI PLE LL+ +KRI++K
Sbjct: 219 MQELRRVRSGAMDETKDLVTLHDVLDAQWLHDNNRDEAYLRKVIAPLESLLMSYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++MLPG+LR+E GIE+ EE+V+++TKGEA+ALA AQM+ M++CDHGV
Sbjct: 279 DSSVNAICYGAKLMLPGLLRFEKGIEIHEEVVLMTTKGEAIALAYAQMSAVEMSSCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YPR+WG+GP
Sbjct: 339 VAKIKRVIMERDLYPRRWGMGP 360
>gi|293333377|ref|NP_001168887.1| uncharacterized protein LOC100382692 [Zea mays]
gi|223973499|gb|ACN30937.1| unknown [Zea mays]
Length = 487
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LR+VI PLE LL +KR+++K
Sbjct: 226 MQELRRVRSGAMDESKGLVTLHDVLDAQWQMDNTRDESYLRKVISPLETLLTSYKRLVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 286 DSAVNAVCYGAKLMLPGLLRYESAIEHHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 346 VAKVKRCIMERDLYPRRWGLGP 367
>gi|189189906|ref|XP_001931292.1| centromere/microtubule-binding protein CBF5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187972898|gb|EDU40397.1| centromere/microtubule-binding protein CBF5 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 499
Score = 202 bits (513), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +L+D ++DE+ LR+VI PLE LL+ +KRI++K
Sbjct: 219 MQELRRVRSGAMDETKDLVTLHDVLDAQWLHDNNRDEAYLRKVIAPLESLLMSYKRIVVK 278
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++MLPG+LR+E GIE+ EE+V+++TKGEA+ALA AQM+ M++CDHGV
Sbjct: 279 DSSVNAICYGAKLMLPGLLRFEKGIEIHEEVVLMTTKGEAIALAYAQMSAVEMSSCDHGV 338
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YPR+WG+GP
Sbjct: 339 VAKIKRVIMERDLYPRRWGMGP 360
>gi|378730574|gb|EHY57033.1| centromere/microtubule-binding protein cbf5 [Exophiala dermatitidis
NIH/UT8656]
Length = 508
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++ D ++DES LR+VI PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDESKGMVTLHDVLDAQWMMDNNRDESYLRKVISPLESLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMIPGLLRFEAGIEVHEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 340 VAKVKRCIMERDLYPRRWGMGP 361
>gi|258571411|ref|XP_002544509.1| centromere/microtubule-binding protein cbf5 [Uncinocarpus reesii
1704]
gi|237904779|gb|EEP79180.1| centromere/microtubule-binding protein cbf5 [Uncinocarpus reesii
1704]
Length = 488
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 122/148 (82%), Gaps = 6/148 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D ++DES LRRV+RPLE LL +KR+++K
Sbjct: 218 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNNRDESYLRRVVRPLESLLTTYKRVVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRY------EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
DSAVNAVCYGA++M+PG+LR+ + GIE+ EE+V+++TKGEA+AL +AQM+T M+
Sbjct: 278 DSAVNAVCYGAKLMIPGLLRFGKWNSMQAGIEVHEEVVLMTTKGEAIALGIAQMSTVEMS 337
Query: 115 TCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
TCDHGVVAK+KR IM+RD YPR+WG+GP
Sbjct: 338 TCDHGVVAKVKRCIMERDLYPRRWGMGP 365
>gi|350634095|gb|EHA22459.1| rRNA pseudouridine synthase [Aspergillus niger ATCC 1015]
Length = 493
Score = 201 bits (512), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 121/150 (80%), Gaps = 8/150 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA ++YD +DES LR+VI+PLE LL +KRI++K
Sbjct: 220 MQELRRVRSGAMDENSGMVTLHDVLDAQWMYDNQRDESYLRKVIKPLETLLTTYKRIVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLR--------YEDGIEMDEEIVIVSTKGEAVALALAQMTTST 112
DSAVNAVCYGA++M+PG+LR YE GIE++EE+V+++TKGEA+A+ +AQM+T
Sbjct: 280 DSAVNAVCYGAKLMVPGLLRFGKILSSPYEAGIEVNEEVVLMTTKGEAIAIGIAQMSTVE 339
Query: 113 MATCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
++TCDHGVVAK+KR IM+RD YPR+WGLGP
Sbjct: 340 LSTCDHGVVAKVKRCIMERDLYPRRWGLGP 369
>gi|116206688|ref|XP_001229153.1| centromere/microtubule binding protein CBF5 [Chaetomium globosum
CBS 148.51]
gi|88183234|gb|EAQ90702.1| centromere/microtubule binding protein CBF5 [Chaetomium globosum
CBS 148.51]
Length = 485
Score = 201 bits (511), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 121/143 (84%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG+ SE++G LVTLHD+ DA + YD DES LR+VI+PLE LL +KR+++
Sbjct: 226 MQELRRVRSGVMSEDNGSLVTLHDVLDAQWQYDNGGDESYLRKVIQPLETLLCTYKRLVV 285
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++MLPG+LRY+ GI+ EE+V+++TKGEA+A+ +AQM+T M+TCDHG
Sbjct: 286 KDSAVNAVCYGAKLMLPGLLRYDAGIDAHEEVVLMTTKGEAIAIGIAQMSTVEMSTCDHG 345
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WGLGP
Sbjct: 346 VVAKVKRCIMERDLYPRRWGLGP 368
>gi|46125657|ref|XP_387382.1| hypothetical protein FG07206.1 [Gibberella zeae PH-1]
Length = 486
Score = 201 bits (511), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LR+VI PLE LL +KR+++K
Sbjct: 224 MQELRRVRSGAMDESKGLVTLHDVLDAQWQMDNTRDESYLRKVISPLETLLTSYKRLVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 284 DSAVNAVCYGAKLMLPGLLRYEAAIEHHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 344 VAKVKRCIMERDLYPRRWGLGP 365
>gi|408397482|gb|EKJ76624.1| hypothetical protein FPSE_03174 [Fusarium pseudograminearum CS3096]
Length = 485
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LR+VI PLE LL +KR+++K
Sbjct: 224 MQELRRVRSGAMDESKGLVTLHDVLDAQWQMDNTRDESYLRKVISPLETLLTSYKRLVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 284 DSAVNAVCYGAKLMLPGLLRYEAAIEHHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 344 VAKVKRCIMERDLYPRRWGLGP 365
>gi|118357710|ref|XP_001012103.1| rRNA pseudouridine synthase, putative family protein [Tetrahymena
thermophila]
gi|89293870|gb|EAR91858.1| rRNA pseudouridine synthase, putative family protein [Tetrahymena
thermophila SB210]
Length = 424
Score = 201 bits (511), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E LVT+HD+KD+++ Y KDES LRRV+ PLE LL RI++K
Sbjct: 237 MEELRRVRSGILDENQYLVTMHDVKDSIWRYQHFKDESYLRRVVLPLEVLLTSFPRIVVK 296
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VN++CYGA++MLPGVLRY++ IE +E+V+++TKGEA+A+A+AQMTTS +ATCDHG+
Sbjct: 297 DSTVNSICYGAKLMLPGVLRYDNNIENGKEVVLITTKGEAIAVAVAQMTTSELATCDHGI 356
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K KRVIMDRD YP++WGLGP++
Sbjct: 357 VCKTKRVIMDRDLYPKRWGLGPRA 380
>gi|169612299|ref|XP_001799567.1| hypothetical protein SNOG_09268 [Phaeosphaeria nodorum SN15]
gi|160702476|gb|EAT83460.2| hypothetical protein SNOG_09268 [Phaeosphaeria nodorum SN15]
Length = 497
Score = 201 bits (510), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +L+D ++DES LR VI PLE LL +KR+++K
Sbjct: 224 MQELRRVRSGAMDETKDLVTLHDVLDAQWLHDNNRDESYLRHVISPLESLLTSYKRVVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++M+PG+LR+E GIE+ EEIV+++TKGEA+ALA AQM+ M++CDHGV
Sbjct: 284 DSSVNAICYGAKLMIPGLLRFEKGIEIHEEIVLMTTKGEAIALAYAQMSAVEMSSCDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+IKRVIM+RD YPR+WG+GP
Sbjct: 344 VARIKRVIMERDLYPRRWGMGP 365
>gi|380485605|emb|CCF39254.1| centromere/microtubule-binding protein cbf5 [Colletotrichum
higginsianum]
Length = 411
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E G+VTLHD+ DA + D +DES LR+VI PLE LL +KRI++K
Sbjct: 171 MQELRRVRSGAMDETKGMVTLHDVLDAQWTMDNTRDESYLRKVISPLETLLTSYKRIVVK 230
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ +E+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 231 DSAVNAVCYGAKLMLPGLLRYESEIEVHDEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 290
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 291 VAKVKRCIMERDLYPRRWGLGP 312
>gi|302911071|ref|XP_003050412.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731349|gb|EEU44699.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 486
Score = 200 bits (509), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/142 (65%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E GLVTLHD+ DA + D +DES LR+VI PLE LL +KR+++K
Sbjct: 225 MQELRRVRSGAMDETKGLVTLHDVLDAQWQMDNTRDESYLRKVISPLETLLTSYKRLVVK 284
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE EE+V+++TKGEA+AL +AQM+T M+TCDHGV
Sbjct: 285 DSAVNAVCYGAKLMLPGLLRYEAAIEHHEEVVLMTTKGEAIALGIAQMSTVEMSTCDHGV 344
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 345 VAKVKRCIMERDLYPRRWGLGP 366
>gi|322703491|gb|EFY95099.1| hypothetical protein MAA_09426 [Metarhizium anisopliae ARSEF 23]
Length = 484
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +VTLHD+ DA + D +DES LRRVI PLE LL G+KR+++K
Sbjct: 223 MQELRRVRSGAMDENKHMVTLHDVLDAQWTMDNTRDESYLRRVIAPLETLLTGYKRLVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE GIE EE+V+++TKGEA+A+ + QM+T M+TCDHGV
Sbjct: 283 DSAVNAVCYGAKLMLPGLLRYESGIEHHEEVVLMTTKGEAIAIGITQMSTVEMSTCDHGV 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 343 VAKVKRCIMERDLYPRRWGLGP 364
>gi|145342497|ref|XP_001416218.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576443|gb|ABO94511.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 411
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 120/144 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE L T+HD+ DAM++ D KD+ +RRV+ PLE LL +KR+++K
Sbjct: 216 MQELRRVRSGICSESKNLATMHDVLDAMWVCDNLKDDHYIRRVVMPLEVLLTNYKRVVVK 275
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE GIE+ +E V+++TKGEA+A+ +A+MTT+ MATCDHG
Sbjct: 276 DSAINAICYGAKLMIPGLLRYEAGIEVGDECVLMTTKGEAIAIGIAEMTTAVMATCDHGS 335
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPR+WGLGP +
Sbjct: 336 VAKVKRVVMERDTYPRRWGLGPNA 359
>gi|119874631|gb|ABM05792.1| dyskerin [Paraspadella gotoi]
Length = 232
Score = 200 bits (508), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/127 (73%), Positives = 111/127 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE D L T+HD+ DA +LYD HKDES LRRV+ PLE LL GHKRII+K
Sbjct: 106 MQELRRVRSGVLSEADNLATMHDVLDAQWLYDNHKDESYLRRVVTPLEALLTGHKRIIMK 165
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA+IMLPG+LRYEDGIE+++EIV+V+TKGEA+ +A+A MTTS +ATCDHG+
Sbjct: 166 DSAVNAVCYGAKIMLPGLLRYEDGIELNQEIVVVTTKGEAICIAIALMTTSVIATCDHGI 225
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 226 VAKIKRV 232
>gi|167386693|ref|XP_001737869.1| H/ACA ribonucleoprotein complex subunit [Entamoeba dispar SAW760]
gi|165899178|gb|EDR25832.1| H/ACA ribonucleoprotein complex subunit, putative [Entamoeba dispar
SAW760]
Length = 490
Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E+D +VTLHD+ DAMYLY+ H DES +R +RPLE LL +K+I++K
Sbjct: 211 MEELRRVRSGNLTEKDNMVTLHDVLDAMYLYENHGDESYIRHCVRPLETLLTKYKKIVVK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++M+PG+LRY GI M+E +V++++KGEA+AL +A+MT+ M TC++GV
Sbjct: 271 DSSVNAICYGAKLMVPGLLRYSKGITMNEVVVLMTSKGEAIALGIAKMTSEEMITCEYGV 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA IKRVIMD+D YPRKWGLGP
Sbjct: 331 VATIKRVIMDKDLYPRKWGLGP 352
>gi|154337350|ref|XP_001564908.1| putative centromere/microtubule binding protein cbf5 [Leishmania
braziliensis MHOM/BR/75/M2904]
gi|134061946|emb|CAM38987.1| putative centromere/microtubule binding protein cbf5 [Leishmania
braziliensis MHOM/BR/75/M2904]
Length = 430
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E D L T+HD+ DA +LY+ KD++ LRRVI P E LL HKRI++K
Sbjct: 223 MEELRRIRTGVITENDHLSTMHDVMDAQWLYENEKDDTYLRRVILPCEYLLSNHKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ +V++STKGEA+ALA A+MTTS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVVVLMSTKGEAIALAYAEMTTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|67467818|ref|XP_649989.1| centromere/microtubule binding protein cbf5 [Entamoeba histolytica
HM-1:IMSS]
gi|56466528|gb|EAL44603.1| centromere/microtubule binding protein cbf5, putative [Entamoeba
histolytica HM-1:IMSS]
gi|407042015|gb|EKE41074.1| rRNA pseudouridine synthase [Entamoeba nuttalli P19]
Length = 484
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E+D +VTLHD+ DAMYLY+ H DES +R +RPLE LL +K+I++K
Sbjct: 211 MEELRRVRSGNLTEKDNMVTLHDVLDAMYLYENHGDESYIRHCVRPLETLLTKYKKIVVK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++M+PG+LRY GI M+E +V++++KGEA+AL +A+MT+ M TC++GV
Sbjct: 271 DSSVNAICYGAKLMVPGLLRYSKGITMNEIVVLMTSKGEAIALGIAKMTSEEMITCEYGV 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA IKRVIMD+D YPRKWGLGP
Sbjct: 331 VATIKRVIMDKDLYPRKWGLGP 352
>gi|449707537|gb|EMD47184.1| rRNA pseudouridine synthase, putative [Entamoeba histolytica KU27]
Length = 482
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E+D +VTLHD+ DAMYLY+ H DES +R +RPLE LL +K+I++K
Sbjct: 211 MEELRRVRSGNLTEKDNMVTLHDVLDAMYLYENHGDESYIRHCVRPLETLLTKYKKIVVK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA++M+PG+LRY GI M+E +V++++KGEA+AL +A+MT+ M TC++GV
Sbjct: 271 DSSVNAICYGAKLMVPGLLRYSKGITMNEIVVLMTSKGEAIALGIAKMTSEEMITCEYGV 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA IKRVIMD+D YPRKWGLGP
Sbjct: 331 VATIKRVIMDKDLYPRKWGLGP 352
>gi|407923102|gb|EKG16190.1| Pseudouridine synthase/archaeosine transglycosylase [Macrophomina
phaseolina MS6]
Length = 489
Score = 199 bits (505), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D +VTLHD+ DA +++D DES LR VI PLE LL +KR+++K
Sbjct: 220 MQELRRVRSGAMSEQDNMVTLHDVLDAQWMHDNSMDESYLRTVISPLESLLTSYKRVVVK 279
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR++ IE+ EE+V+++TKGEA+AL +A M+T M+TCDHGV
Sbjct: 280 DSAVNAVCYGAKLMVPGLLRFDKEIEIHEEVVLMTTKGEAIALGIALMSTVEMSTCDHGV 339
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAKIKRVIM+RD YP++WGLGP
Sbjct: 340 VAKIKRVIMERDLYPKRWGLGP 361
>gi|440638862|gb|ELR08781.1| centromere/microtubule-binding protein cbf5 [Geomyces destructans
20631-21]
Length = 488
Score = 198 bits (504), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+ +VTLHD+ DA ++ D +DES LRRVI PLE LL +KRI++K
Sbjct: 222 MQELRRVRSGAMDEKVNMVTLHDVLDAQWMSDNTRDESYLRRVIAPLETLLTTYKRIVVK 281
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE GIE+ +E+V+++TKGEA+AL +AQM+T ++TCDHGV
Sbjct: 282 DSAVNAVCYGAKLMIPGLLRYESGIEVHDEVVLMTTKGEAIALGIAQMSTVELSTCDHGV 341
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 342 VAKVKRCIMERDLYPRRWGMGP 363
>gi|412990248|emb|CCO19566.1| predicted protein [Bathycoccus prasinos]
Length = 405
Score = 198 bits (504), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D LVT+HD+ DA + D + E LRRV+ PLE LL KR+++K
Sbjct: 212 MQELRRVRSGVCDENDNLVTMHDVLDAQWCRDNLQKEDYLRRVVMPLEVLLTNFKRLVVK 271
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE G+E+ EE ++++TKGEA+A A AQM T+ MATCDHG
Sbjct: 272 DSAVNAICYGAKLMIPGLLRYESGVEVGEECILITTKGEAIATATAQMNTAIMATCDHGC 331
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KRV+M+RDTYPR+WGLGP +
Sbjct: 332 VAKVKRVVMERDTYPRRWGLGPTA 355
>gi|299470748|emb|CBN79794.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 512
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 118/141 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SEE LVT+HD+ DA ++YD KDES LRR+I PLE LL+ +KR+++K
Sbjct: 248 MQELRRVRSGVLSEEGNLVTMHDVLDAQHVYDTKKDESYLRRIIMPLEVLLLTYKRVVVK 307
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+ IE++ E+V+V+TKGEA+A+ +AQM + MATCDHG
Sbjct: 308 DSAVNAVCYGAKLMIPGLLRFAADIEINTEVVMVTTKGEAIAVGIAQMISPVMATCDHGT 367
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
VA IKRVIM+RDTYPR+WGLG
Sbjct: 368 VATIKRVIMERDTYPRRWGLG 388
>gi|261331934|emb|CBH14927.1| centromere/microtubule binding protein cbf5,putative [Trypanosoma
brucei gambiense DAL972]
Length = 427
Score = 198 bits (503), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LYD KDE+ LRRVI P E LL +KR+++K
Sbjct: 223 MEELRRIRTGVISEDDHISTMHDVLDAQWLYDNEKDETYLRRVILPCEYLLTNYKRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVIVLMTTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|71746444|ref|XP_822277.1| centromere/microtubule binding protein [Trypanosoma brucei TREU927]
gi|70831945|gb|EAN77449.1| centromere/microtubule binding protein cbf5, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 427
Score = 198 bits (503), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LYD KDE+ LRRVI P E LL +KR+++K
Sbjct: 223 MEELRRIRTGVISEDDHISTMHDVLDAQWLYDNEKDETYLRRVILPCEYLLTNYKRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVIVLMTTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|401421911|ref|XP_003875444.1| centromere/microtubule binding protein cbf5,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322491681|emb|CBZ26954.1| centromere/microtubule binding protein cbf5,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 430
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E D L T+HD+ DA +LY+ KD++ LRRVI P E LL HKRI++K
Sbjct: 223 MEELRRIRTGVITENDHLSTMHDVMDAQWLYENEKDDTYLRRVILPCEYLLSNHKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ +V+++TKGEA+ALA A+MTTS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVVVLMTTKGEAIALAYAEMTTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|157869178|ref|XP_001683141.1| putative centromere/microtubule binding protein cbf5 [Leishmania
major strain Friedlin]
gi|68224024|emb|CAJ05101.1| putative centromere/microtubule binding protein cbf5 [Leishmania
major strain Friedlin]
Length = 430
Score = 198 bits (503), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E D L T+HD+ DA +LY+ KD++ LRRVI P E LL HKRI++K
Sbjct: 223 MEELRRIRTGVITENDHLSTMHDVMDAQWLYENEKDDTYLRRVILPCEYLLSNHKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ +V+++TKGEA+ALA A+MTTS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVVVLMTTKGEAIALAYAEMTTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|403222102|dbj|BAM40234.1| centromere/microtubule binding protein [Theileria orientalis strain
Shintoku]
Length = 427
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE D +VT+HD+ DA YLYD DES LR V+ PLE LL G+KR+++K
Sbjct: 214 MQELRRVKSGNISEYDNMVTMHDVLDAQYLYDSTSDESYLRYVVSPLEQLLTGYKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E+ IE+ +E+V+++TKGEA+AL +AQMT++ +AT DHGV
Sbjct: 274 DSCVNAICYGAKLMIPGVLRFENNIELHDELVMITTKGEAIALGIAQMTSAVIATVDHGV 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRDTYP +WG G +S
Sbjct: 334 VAVIKRVIMDRDTYPMRWGYGNRS 357
>gi|171692219|ref|XP_001911034.1| hypothetical protein [Podospora anserina S mat+]
gi|170946058|emb|CAP72859.1| unnamed protein product [Podospora anserina S mat+]
Length = 474
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/145 (62%), Positives = 120/145 (82%), Gaps = 1/145 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSG+ SE+DG LVTLHD+ DA + YD DE+LLR+VI PLE LL +KR+++
Sbjct: 218 MQELRRVRSGVMSEDDGKLVTLHDVLDAQWAYDNGGDETLLRKVIHPLETLLCTYKRLVV 277
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KD+AVNA+CYGA++ LPG+LRY I++ EE+V+++TKGEA+A+ +AQM+T M+TCDHG
Sbjct: 278 KDTAVNAICYGAKLTLPGLLRYSKDIDVHEEVVLITTKGEAIAIGIAQMSTVEMSTCDHG 337
Query: 120 VVAKIKRVIMDRDTYPRKWGLGPKS 144
VVAK+KR IM+RD YPR+WGLGP +
Sbjct: 338 VVAKVKRCIMERDLYPRRWGLGPTA 362
>gi|402074182|gb|EJT69711.1| centromere/microtubule-binding protein cbf5 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 477
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 117/142 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVTLHD+ DA +L D +DES LRRVI+PLE LL +KR+++K
Sbjct: 221 MQELRRVRSGAMDETKDLVTLHDVLDAQWLMDNARDESYLRRVIQPLETLLTTYKRLVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ EE+V+++TKGEA+A+ +AQM+T +++CDHGV
Sbjct: 281 DSAVNAVCYGAKLMLPGLLRYETDIELHEEVVLMTTKGEAIAIGIAQMSTVEISSCDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 341 VAKVKRCIMERDLYPRRWGLGP 362
>gi|339241467|ref|XP_003376659.1| putative H/ACA ribonucleoprotein complex subunit 4 [Trichinella
spiralis]
gi|316974612|gb|EFV58096.1| putative H/ACA ribonucleoprotein complex subunit 4 [Trichinella
spiralis]
Length = 529
Score = 197 bits (501), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 121/161 (75%), Gaps = 19/161 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D +VT+HD+ DA +LYD +DES LR VI PLE LLVG KRI++K
Sbjct: 262 MQELRRIRSGHTSEKDNMVTMHDVMDAQWLYDNCQDESYLRYVISPLEKLLVGMKRIVVK 321
Query: 61 DSAV-------------------NAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAV 101
DSAV NA+CYGA+I+LPG+L+YE GIE+++++V++STKGEAV
Sbjct: 322 DSAVSEQFTFIVCYRCFRTSDKVNAICYGAKILLPGILKYESGIELNDDVVVMSTKGEAV 381
Query: 102 ALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
L +A MT+ST+A CDHGVVAKIKRVIM+RD YPR+W LGP
Sbjct: 382 CLGIALMTSSTIAGCDHGVVAKIKRVIMERDVYPRRWCLGP 422
>gi|342183766|emb|CCC93245.1| putative centromere/microtubule binding protein cbf5 [Trypanosoma
congolense IL3000]
Length = 427
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E+D + T+HD+ DA +LYD KDE+ LRRVI P E LL +KR+++K
Sbjct: 223 MEELRRIRTGVITEDDHISTMHDVLDAQWLYDNEKDETYLRRVILPCEYLLTNYKRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEAVALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDIIVLMTTKGEAVALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|145488199|ref|XP_001430104.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145507894|ref|XP_001439899.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397199|emb|CAK62706.1| unnamed protein product [Paramecium tetraurelia]
gi|124407100|emb|CAK72502.1| unnamed protein product [Paramecium tetraurelia]
Length = 447
Score = 197 bits (500), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 119/144 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E +V++HD+ DA Y Y++ KDES LR VI PLE LL +KR+++K
Sbjct: 229 MEELRRVRSGILDENKYMVSMHDVLDAQYRYEKFKDESYLRHVIIPLEVLLTNYKRVVVK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR++D I++ +EIV+++TKGEA+A+A+AQMTT +A+CDHGV
Sbjct: 289 DSTVNAICYGAKLMVPGVLRFDDKIDIGDEIVLITTKGEAIAVAIAQMTTGEIASCDHGV 348
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K KRVIMDR+TYPRKWG GP++
Sbjct: 349 VCKSKRVIMDRETYPRKWGTGPRA 372
>gi|323454706|gb|EGB10576.1| hypothetical protein AURANDRAFT_23304, partial [Aureococcus
anophagefferens]
Length = 374
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVT+HD+ DA + YD KDES LRRV+ PLE LL KR+++K
Sbjct: 229 MQELRRVRSGALDENAHLVTMHDVLDAQHHYDATKDESYLRRVVMPLEVLLTSFKRLVVK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+ D ++++EE+V+++TKGEA+A+ +A MTTS MA CDHG
Sbjct: 289 DSAVNAICYGAKLMMPGLLRFADDVDVNEEVVLMTTKGEAIAVGIAMMTTSVMADCDHGA 348
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+IKRVIM+RDTYPRKWGLGP
Sbjct: 349 VARIKRVIMERDTYPRKWGLGP 370
>gi|398015080|ref|XP_003860730.1| centromere/microtubule binding protein cbf5, putative [Leishmania
donovani]
gi|322498952|emb|CBZ34025.1| centromere/microtubule binding protein cbf5, putative [Leishmania
donovani]
Length = 430
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E D L T+HD+ DA +LY+ +D++ LRRVI P E LL HKRI++K
Sbjct: 223 MEELRRIRTGVITENDHLSTMHDVMDAQWLYENERDDTYLRRVILPCEYLLSNHKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ +V+++TKGEA+ALA A+MTTS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVVVLMTTKGEAIALAYAEMTTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|146086157|ref|XP_001465473.1| putative centromere/microtubule binding protein cbf5 [Leishmania
infantum JPCM5]
gi|134069571|emb|CAM67894.1| putative centromere/microtubule binding protein cbf5 [Leishmania
infantum JPCM5]
Length = 430
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 119/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E D L T+HD+ DA +LY+ +D++ LRRVI P E LL HKRI++K
Sbjct: 223 MEELRRIRTGVITENDHLSTMHDVMDAQWLYENERDDTYLRRVILPCEYLLSNHKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ +V+++TKGEA+ALA A+MTTS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDNGIERDDVVVLMTTKGEAIALAYAEMTTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|71030864|ref|XP_765074.1| rRNA pseudouridine synthase [Theileria parva strain Muguga]
gi|68352030|gb|EAN32791.1| rRNA pseudouridine synthase, putative [Theileria parva]
Length = 421
Score = 197 bits (500), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE D +VT+HD+ D+ YLYD DES LR V+ PLE LL GHKR+++K
Sbjct: 214 MQELRRIKSGNISEYDNMVTMHDVLDSQYLYDTTGDESYLRYVVTPLEQLLTGHKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E IE+ +EIV+++TKGEA+AL +AQMT++ +AT DHG+
Sbjct: 274 DSCVNAICYGAKLMIPGVLRFETNIELHDEIVMITTKGEAIALGIAQMTSAVIATVDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRDTYP +WG G +S
Sbjct: 334 VAVIKRVIMDRDTYPLRWGYGNRS 357
>gi|403363097|gb|EJY81286.1| Pseudouridine synthase [Oxytricha trifallax]
Length = 501
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/142 (63%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D + T+HD+KDA + +++ +E+ LRRVI PLE LL RI++K
Sbjct: 238 MQELRRVRSGALKEDDTMATMHDVKDAQWHFEKFNNETYLRRVIMPLEILLTQLPRIVVK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D++VNAVCYGAQ+MLPGVLRYE GIE+ +E++++STKGEA+ALA+A MTTST+ATCDHG+
Sbjct: 298 DTSVNAVCYGAQLMLPGVLRYESGIEVGKEVILMSTKGEAIALAIAHMTTSTIATCDHGI 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
V K KRVIM+RD Y RKW LGP
Sbjct: 358 VTKTKRVIMERDVYERKWKLGP 379
>gi|336266744|ref|XP_003348139.1| hypothetical protein SMAC_03984 [Sordaria macrospora k-hell]
gi|380091075|emb|CCC11281.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 478
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSGI SE++G +VTLHD+ DA + +D DE+ LR+VI+PLE LL +KRI++
Sbjct: 213 MQELRRVRSGIMSEDNGSMVTLHDVLDAQWQFDNGGDETALRKVIQPLETLLTTYKRIVV 272
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++MLPG+LR+E GIE EE+V+++TKGEA+A+ +AQM M +CDHG
Sbjct: 273 KDSAVNAVCYGAKLMLPGLLRFEKGIETHEEVVLMTTKGEAIAIGIAQMNGVEMLSCDHG 332
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WGLGP
Sbjct: 333 VVAKVKRCIMERDLYPRRWGLGP 355
>gi|119874605|gb|ABM05779.1| dyskerin [Asterias rubens]
Length = 239
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 110/127 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++GLVT+HDI DA ++YD HKDE LRR I+PLE LL HKRI+LK
Sbjct: 113 MAELRRVRSGIQSEKEGLVTMHDIXDAQWVYDNHKDEKYLRRCIKPLEALLTSHKRIVLK 172
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVC GA++MLPGVLR+EDGIE++ E+V+++TKGEA+ L +A MTT+ MATCDHGV
Sbjct: 173 DSAVNAVCXGAKVMLPGVLRFEDGIEINSEVVVMTTKGEAIXLGIALMTTAVMATCDHGV 232
Query: 121 VAKIKRV 127
VAK+KRV
Sbjct: 233 VAKLKRV 239
>gi|85099653|ref|XP_960827.1| centromere/microtubule-binding protein CBF5 [Neurospora crassa
OR74A]
gi|28922353|gb|EAA31591.1| centromere/microtubule-binding protein CBF5 [Neurospora crassa
OR74A]
gi|28950091|emb|CAD70854.1| probable CENTROMERE/MICROTUBULE BINDING PROTEIN CBF5 [Neurospora
crassa]
gi|336472631|gb|EGO60791.1| hypothetical protein NEUTE1DRAFT_127587 [Neurospora tetrasperma
FGSC 2508]
gi|350294136|gb|EGZ75221.1| centromere/microtubule-binding protein CBF5 [Neurospora tetrasperma
FGSC 2509]
Length = 480
Score = 196 bits (499), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/143 (63%), Positives = 118/143 (82%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR RSGI SE++G +VTLHD+ DA + +D DE+ LR+VI+PLE LL +KRI++
Sbjct: 215 MQELRRVRSGIMSEDNGSMVTLHDVLDAQWQFDNGGDETALRKVIQPLETLLTTYKRIVV 274
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAVNAVCYGA++MLPG+LR+E GIE EE+V+++TKGEA+A+ +AQM M +CDHG
Sbjct: 275 KDSAVNAVCYGAKLMLPGLLRFEKGIETHEEVVLMTTKGEAIAIGIAQMNGVEMLSCDHG 334
Query: 120 VVAKIKRVIMDRDTYPRKWGLGP 142
VVAK+KR IM+RD YPR+WGLGP
Sbjct: 335 VVAKVKRCIMERDLYPRRWGLGP 357
>gi|84994974|ref|XP_952209.1| centromere/microtubule binding protein [Theileria annulata strain
Ankara]
gi|65302370|emb|CAI74477.1| centromere/microtubule binding protein, putative [Theileria
annulata]
Length = 420
Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE D +VT+HD+ DA YLYD DES LR V+ PLE LL G+KR+++K
Sbjct: 214 MQELRRIKSGNISEYDNMVTMHDVLDAQYLYDTTADESYLRYVVSPLEQLLTGYKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E IE+ +EIV+++TKGEA+AL +AQMT++ +AT DHG+
Sbjct: 274 DSCVNAICYGAKLMIPGVLRFETNIELHDEIVMITTKGEAIALGIAQMTSAVIATVDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRDTYP +WG G +S
Sbjct: 334 VAVIKRVIMDRDTYPLRWGYGNRS 357
>gi|119874629|gb|ABM05791.1| dyskerin [Limulus polyphemus]
Length = 233
Score = 196 bits (497), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/119 (77%), Positives = 110/119 (92%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++GLVT+HD+ DA +LYD HKDES LRRVIRP+EGLLV HKR+I+K
Sbjct: 115 MQELRRVRSGIQSEKEGLVTMHDVLDAQWLYDNHKDESYLRRVIRPVEGLLVSHKRVIMK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
DSAVNAVCYGA+IMLPGVLR+EDGIE++EEIVIV+TKGEA+ALA+A MTT+T+A+ DHG
Sbjct: 175 DSAVNAVCYGAKIMLPGVLRFEDGIELNEEIVIVTTKGEAIALAIALMTTATIASWDHG 233
>gi|429327653|gb|AFZ79413.1| rRNA pseudouridine synthase, putative [Babesia equi]
Length = 417
Score = 195 bits (496), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D +VT+HD+ DA YLYD+ DES LR VI PLE LL+ KRI++K
Sbjct: 214 MQELRRIKSGNITEYDNMVTMHDVLDAQYLYDKTTDESYLRYVISPLEKLLIEFKRIVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E+GIE+ E+V+++TKGEA+A+ +AQM T+ +A+ DHG+
Sbjct: 274 DSCVNAICYGAKLMIPGVLRFENGIELHTEVVMITTKGEAIAIGIAQMPTAVIASVDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRDTYP +WG GP++
Sbjct: 334 VAVIKRVIMDRDTYPMRWGYGPRA 357
>gi|401410600|ref|XP_003884748.1| putative centromere/microtubule binding protein [Neospora caninum
Liverpool]
gi|325119166|emb|CBZ54718.1| putative centromere/microtubule binding protein [Neospora caninum
Liverpool]
Length = 503
Score = 195 bits (495), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 90/144 (62%), Positives = 118/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D LVT+HD+ DAM++YD +DE+ LRR I PLE LL G RI++K
Sbjct: 233 MQELRRVRSGNLGENDHLVTMHDVLDAMHVYDSTRDETYLRRTIFPLELLLTGFPRIVVK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E GIE+++E+V+++TKGEA+ALA+AQMT+S +AT DHGV
Sbjct: 293 DSCVNAICYGAKLMIPGVLRFESGIEVNQEVVLMTTKGEAIALAVAQMTSSVIATVDHGV 352
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V IKRV+MDRDTY +WG GP++
Sbjct: 353 VVTIKRVLMDRDTYDMRWGYGPRA 376
>gi|340056620|emb|CCC50954.1| putative centromere/microtubule binding protein cbf5 [Trypanosoma
vivax Y486]
Length = 428
Score = 195 bits (495), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LY+ KD+S LRRVI P E LL +KRI++K
Sbjct: 223 MEELRRIRTGVISEDDHISTMHDVLDAQWLYENEKDDSYLRRVILPCEYLLTNYKRIVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R++ GIE D+ IV+++TKGEA+AL A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLARFDSGIERDDVIVLMTTKGEAIALGYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|440300243|gb|ELP92732.1| H/ACA ribonucleoprotein complex subunit, putative [Entamoeba
invadens IP1]
Length = 473
Score = 194 bits (494), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 115/142 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D +VTLHD+ D+MYLY+ H DES LR ++PLE LL +KRI++K
Sbjct: 211 MEELRRVRSGNLCEKDDMVTLHDVMDSMYLYENHGDESYLRYCVKPLEKLLTNYKRIVVK 270
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PG+LRY I M+E +V+++TKGEA+AL +A+MT+ M++C +GV
Sbjct: 271 DSTVNAICYGAKLMIPGLLRYAKDITMNEIVVLMTTKGEAIALGIAKMTSEEMSSCQYGV 330
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA IKRVIMD+D YPRKWGLGP
Sbjct: 331 VAAIKRVIMDKDLYPRKWGLGP 352
>gi|119874609|gb|ABM05781.1| dyskerin [Tetranychus urticae]
Length = 233
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 111/127 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR RSGI +E D LVT+HDI DA +LY+ H DE+ LRRVI+PLE LL HKRII+K
Sbjct: 107 MIELRRIRSGIVTEYDNLVTMHDILDAQWLYENHNDETYLRRVIQPLEALLTSHKRIIMK 166
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNA+CYGA+IMLPGVLRY+DGIE+ EIVI++TKGEA+ +A+A MTTST+A+CDHGV
Sbjct: 167 DSSVNAICYGAKIMLPGVLRYDDGIEIGAEIVILTTKGEAICIAIALMTTSTIASCDHGV 226
Query: 121 VAKIKRV 127
VAKIKRV
Sbjct: 227 VAKIKRV 233
>gi|71420515|ref|XP_811513.1| centromere/microtubule binding protein cbf5 [Trypanosoma cruzi
strain CL Brener]
gi|70876184|gb|EAN89662.1| centromere/microtubule binding protein cbf5, putative [Trypanosoma
cruzi]
Length = 428
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LY+ KDE+ LRRVI P E +L ++R+++K
Sbjct: 223 MEELRRIRTGVISEDDHVSTMHDVLDAQWLYENEKDETYLRRVILPCEYILTNYRRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLSRFDNGIERDDIIVLITTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|407837272|gb|EKF99701.1| centromere/microtubule binding protein cbf5, putative [Trypanosoma
cruzi]
Length = 428
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LY+ KDE+ LRRVI P E +L ++R+++K
Sbjct: 223 MEELRRIRTGVISEDDHVSTMHDVLDAQWLYENEKDETYLRRVILPCEYILTNYRRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLSRFDNGIERDDIIVLITTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|71412047|ref|XP_808226.1| centromere/microtubule binding protein cbf5 [Trypanosoma cruzi
strain CL Brener]
gi|70872389|gb|EAN86375.1| centromere/microtubule binding protein cbf5, putative [Trypanosoma
cruzi]
Length = 428
Score = 194 bits (494), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ SE+D + T+HD+ DA +LY+ KDE+ LRRVI P E +L ++R+++K
Sbjct: 223 MEELRRIRTGVISEDDHVSTMHDVLDAQWLYENEKDETYLRRVILPCEYILTNYRRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLSRFDNGIERDDIIVLITTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|407406560|gb|EKF30839.1| centromere/microtubule binding protein cbf5, putative [Trypanosoma
cruzi marinkellei]
Length = 428
Score = 194 bits (493), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 120/142 (84%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E+D + T+HD+ DA +LY+ KDE+ LRRVI P E +L +KR+++K
Sbjct: 223 MEELRRIRTGVITEDDHVSTMHDVLDAQWLYENEKDETYLRRVILPCEYILTNYKRVVVK 282
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+ R+++GIE D+ IV+++TKGEA+ALA A+M+TS MA+ DHG+
Sbjct: 283 DSAVNAVCYGAKLMIPGLSRFDNGIERDDIIVLITTKGEAIALAYAEMSTSQMASVDHGI 342
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA+ KRVIMDRDTYPR+WGLGP
Sbjct: 343 VARSKRVIMDRDTYPRRWGLGP 364
>gi|119874607|gb|ABM05780.1| dyskerin [Astropecten brasiliensis]
Length = 241
Score = 194 bits (492), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 90/127 (70%), Positives = 111/127 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE+D LVT+HD+ DA ++YD HKDE +RRV++PLE LL HKRII+K
Sbjct: 115 MAELRRVRSGIQSEKDHLVTMHDVLDAQWVYDNHKDEEYMRRVVKPLEALLTSHKRIIMK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++MLPGVLR+EDGIE++ EI+IV+TKGEAVALA+A MTT+ MATC GV
Sbjct: 175 DSAINAICYGAKVMLPGVLRFEDGIEVNAEIIIVTTKGEAVALAVALMTTAVMATCAPGV 234
Query: 121 VAKIKRV 127
VAK+KRV
Sbjct: 235 VAKLKRV 241
>gi|156048188|ref|XP_001590061.1| hypothetical protein SS1G_08825 [Sclerotinia sclerotiorum 1980]
gi|154693222|gb|EDN92960.1| hypothetical protein SS1G_08825 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 483
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 117/142 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +VTLHD+ DA ++ D +DE+ LR+VI+PLE LL +KRI++K
Sbjct: 222 MQELRRVRSGAMDETKDMVTLHDVLDAQWMQDNARDEAYLRKVIQPLETLLTTYKRIVVK 281
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+AL +AQM+T +++CDHGV
Sbjct: 282 DSAVNAVCYGAKLMIPGLLRYEADIEVHEEVVLMTTKGEAIALGIAQMSTVELSSCDHGV 341
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 342 VAKVKRCIMERDLYPRRWGMGP 363
>gi|154302967|ref|XP_001551892.1| centromere/microtubule binding protein CBF5 [Botryotinia fuckeliana
B05.10]
gi|347832299|emb|CCD47996.1| similar to centromere/microtubule-binding protein cbf5 [Botryotinia
fuckeliana]
Length = 481
Score = 193 bits (491), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 87/142 (61%), Positives = 117/142 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +VTLHD+ DA ++ D +DE+ LR+VI+PLE LL +KRI++K
Sbjct: 222 MQELRRVRSGAMDETKDMVTLHDVLDAQWMQDNARDEAYLRKVIQPLETLLTTYKRIVVK 281
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE IE+ EE+V+++TKGEA+AL +AQM+T +++CDHGV
Sbjct: 282 DSAVNAVCYGAKLMIPGLLRYEADIEVHEEVVLMTTKGEAIALGIAQMSTVELSSCDHGV 341
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 342 VAKVKRCIMERDLYPRRWGMGP 363
>gi|119874617|gb|ABM05785.1| dyskerin [Ciona intestinalis]
Length = 238
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 92/127 (72%), Positives = 109/127 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE D LVT+HD+ DA Y D HKDE+ LRRVI PLE LLV HKRIILK
Sbjct: 112 MQELRRVRSGIMSESDDLVTMHDVLDAQYQLDHHKDETHLRRVISPLEKLLVSHKRIILK 171
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I+LPGVLRYEDGIE+++EIVI++TKGEA+ LA+A MTT+ ++TCDHG+
Sbjct: 172 DSAVNAICYGAKILLPGVLRYEDGIEVNQEIVIITTKGEAICLAIALMTTAVISTCDHGI 231
Query: 121 VAKIKRV 127
AKIKRV
Sbjct: 232 AAKIKRV 238
>gi|389627558|ref|XP_003711432.1| centromere/microtubule-binding protein cbf5 [Magnaporthe oryzae
70-15]
gi|351643764|gb|EHA51625.1| centromere/microtubule-binding protein cbf5 [Magnaporthe oryzae
70-15]
gi|440468934|gb|ELQ38061.1| centromere/microtubule-binding protein cbf5 [Magnaporthe oryzae
Y34]
gi|440480562|gb|ELQ61221.1| centromere/microtubule-binding protein cbf5 [Magnaporthe oryzae
P131]
Length = 485
Score = 193 bits (490), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E L TLHD+ DA +L D +DES LR+VI+PLE LL +KR+++K
Sbjct: 229 MQELRRVRSGAMDETKDLHTLHDVLDAQWLMDNTRDESYLRKVIQPLETLLTTYKRLVVK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ EE+V+++TKGEA+A+ +AQM+T +++CDHGV
Sbjct: 289 DSAVNAVCYGAKLMLPGLLRYEADIELHEEVVLMTTKGEAIAIGIAQMSTVEISSCDHGV 348
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 349 VAKVKRCIMERDLYPRRWGLGP 370
>gi|156085176|ref|XP_001610071.1| rRNA pseudouridine synthase family protein [Babesia bovis T2Bo]
gi|154797323|gb|EDO06503.1| rRNA pseudouridine synthase, putative family protein [Babesia
bovis]
Length = 418
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/144 (61%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE D +VT+HD+ DA YL D DES +RRVI PLE LL +KRI++K
Sbjct: 214 MQELRRVKSGHISEYDNMVTMHDVLDAQYLLDNTNDESYIRRVISPLERLLTDYKRIVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E+GIE+ E+IV+++TKGEA+AL +AQM T+ +A+ DHGV
Sbjct: 274 DSCVNAICYGAKLMVPGVLRFENGIELHEQIVLITTKGEAIALGIAQMPTAVIASVDHGV 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ IKRVIMDRDTY +WG GP++
Sbjct: 334 VSVIKRVIMDRDTYSLRWGFGPRA 357
>gi|237842913|ref|XP_002370754.1| centromere/microtubule binding protein, putative [Toxoplasma gondii
ME49]
gi|211968418|gb|EEB03614.1| centromere/microtubule binding protein, putative [Toxoplasma gondii
ME49]
gi|221482069|gb|EEE20430.1| centromere/microtubule binding protein, putative [Toxoplasma gondii
GT1]
gi|221502546|gb|EEE28273.1| centromere/microtubule binding protein, putative [Toxoplasma gondii
VEG]
Length = 505
Score = 192 bits (489), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 88/144 (61%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D LVT+HD+ DAM++YD +DE+ LRR I PLE LL G RI++K
Sbjct: 235 MQELRRVRSGNLGERDHLVTMHDVLDAMHVYDSTRDETYLRRTIFPLELLLTGFPRIVVK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+E GIE+ +E+V+++TKGEA+AL +AQMT+S +AT DHGV
Sbjct: 295 DSCVNAICYGAKLMIPGVLRFESGIEVHQEVVLMTTKGEAIALGVAQMTSSVIATVDHGV 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ +KRV+MDRDTY +WG GP++
Sbjct: 355 VSTVKRVLMDRDTYDMRWGYGPRA 378
>gi|119874611|gb|ABM05782.1| dyskerin [Lithobius forficatus]
Length = 215
Score = 192 bits (487), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/127 (70%), Positives = 113/127 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+QSE++ L T+HD+ DA ++Y+ +KDE+ LRRVI+PLE LLV HKRII+K
Sbjct: 89 MQELRRVRSGVQSEKEELATMHDLLDAQWVYENNKDETYLRRVIKPLERLLVTHKRIIMK 148
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPGVLRYEDGIE+++EIVI++ KGEA+A+ +A MTTSTMATC+HGV
Sbjct: 149 DSAVNAVCYGAKVMLPGVLRYEDGIEINQEIVIITAKGEAIAIGIALMTTSTMATCNHGV 208
Query: 121 VAKIKRV 127
V K+KRV
Sbjct: 209 VXKLKRV 215
>gi|440803036|gb|ELR23950.1| rRNA pseudouridine synthase, putative [Acanthamoeba castellanii
str. Neff]
Length = 523
Score = 192 bits (487), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/146 (67%), Positives = 126/146 (86%), Gaps = 2/146 (1%)
Query: 1 MIELRRNRSGIQSE--EDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRII 58
M ELRR RSG+ +E +D LVT HDI DA Y+YD KDES LRR+I+PLE LL HKR++
Sbjct: 250 MQELRRVRSGLLTENAKDCLVTCHDILDAQYVYDTTKDESYLRRIIQPLEVLLTKHKRVV 309
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+KDSAVNA+CYGA+ M+PG+LRYE+GIE+ EEIV+++TKGEA+AL +AQM+T+ MA+CDH
Sbjct: 310 VKDSAVNAICYGAKFMIPGLLRYEEGIEVGEEIVMMTTKGEAIALGIAQMSTADMASCDH 369
Query: 119 GVVAKIKRVIMDRDTYPRKWGLGPKS 144
GVVAKIKRVI++RDTYPR+WG GP++
Sbjct: 370 GVVAKIKRVILERDTYPRRWGKGPRA 395
>gi|145491600|ref|XP_001431799.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398905|emb|CAK64401.1| unnamed protein product [Paramecium tetraurelia]
Length = 448
Score = 190 bits (482), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKR-IIL 59
M ELRR RSGI E +V++HD+ DA Y Y++ KDES LR VI PLE LL +KR ++
Sbjct: 229 MEELRRVRSGILDENKYMVSMHDVLDAQYRYEKFKDESYLRHVIIPLEVLLTNYKRRQVV 288
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDS VNA+CYGA++M+PGVLR++D I++ +EIV+++TKGEA+A+A+AQMTT +A+CDHG
Sbjct: 289 KDSTVNAICYGAKLMVPGVLRFDDKIDIGDEIVLITTKGEAIAVAIAQMTTGEIASCDHG 348
Query: 120 VVAKIKRVIMDRDTYPRKWGLGPKS 144
VV K KRVIMDR+TYPRKWG GP++
Sbjct: 349 VVCKSKRVIMDRETYPRKWGTGPRA 373
>gi|82595579|ref|XP_725907.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481090|gb|EAA17472.1| unknown protein-related [Plasmodium yoelii yoelii]
Length = 4236
Score = 189 bits (480), Expect = 3e-46, Method: Composition-based stats.
Identities = 86/144 (59%), Positives = 114/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DE+ LR++I PLE LL+ RI++K
Sbjct: 3991 MQELRRVKSGNMTEYDNMCTLHDIMDAQYIYDTTGDETYLRKIITPLEKLLINFPRIVIK 4050
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I++ EIV+++TKGEAVALA+AQMT++ +AT DHG+
Sbjct: 4051 DSAVNAICYGAKLTIPGVLRFDNNIDVYSEIVLMTTKGEAVALAIAQMTSTVIATVDHGI 4110
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA KRVIMDRDTY KWG G +S
Sbjct: 4111 VALTKRVIMDRDTYDVKWGFGNRS 4134
>gi|124808563|ref|XP_001348347.1| pseudouridine synthase, putative [Plasmodium falciparum 3D7]
gi|23497239|gb|AAN36786.1| pseudouridine synthase, putative [Plasmodium falciparum 3D7]
Length = 466
Score = 188 bits (478), Expect = 5e-46, Method: Composition-based stats.
Identities = 88/144 (61%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DES LR++I PLE LL+ RI++K
Sbjct: 215 MQELRRVKSGNMTEYDNMCTLHDILDAQYIYDTTGDESYLRKIITPLEKLLINFPRIVIK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+++ EIVI++TKGEAVALA+AQMT++ +AT DHGV
Sbjct: 275 DSAVNAICYGAKLTIPGVLRFDNNIDVNTEIVIMTTKGEAVALAIAQMTSTVIATVDHGV 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ KRVIMDRDTY KWG G +S
Sbjct: 335 VSLTKRVIMDRDTYDVKWGFGNRS 358
>gi|399215940|emb|CCF72628.1| unnamed protein product [Babesia microti strain RI]
Length = 412
Score = 188 bits (477), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 85/144 (59%), Positives = 116/144 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE+D +VTLH+I DA Y+Y + DE+ LR +I PLEGLL R+++K
Sbjct: 206 MQELRRIKSGHLSEDDNMVTLHEILDANYIYQKTNDETYLRAIISPLEGLLTKLPRLVVK 265
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNAVCYGA++M+PG+LR+EDGIE++ +V+++TKGEA+AL +AQM T+ + + DHGV
Sbjct: 266 DSCVNAVCYGAKLMIPGLLRFEDGIELNSTVVMMTTKGEAIALGVAQMPTAVICSVDHGV 325
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA +KRVIMDRDTYP +WG GP++
Sbjct: 326 VALVKRVIMDRDTYPTRWGHGPRA 349
>gi|156102170|ref|XP_001616778.1| tRNA pseudouridine synthase [Plasmodium vivax Sal-1]
gi|148805652|gb|EDL47051.1| tRNA pseudouridine synthase, putative [Plasmodium vivax]
Length = 478
Score = 187 bits (475), Expect = 1e-45, Method: Composition-based stats.
Identities = 89/144 (61%), Positives = 113/144 (78%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA ++YD DE+ LRR+I PLE LL+ RI++K
Sbjct: 221 MQELRRVKSGNMTEYDNMCTLHDILDAQHVYDTTGDETYLRRIITPLEKLLINFPRIVIK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+M EIV+++TKGEAVALA+AQMT S +AT DHGV
Sbjct: 281 DSAVNAICYGAKLTIPGVLRFDNNIDMYAEIVLMTTKGEAVALAIAQMTASVIATVDHGV 340
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA KRVIMDRDTY KWG G +S
Sbjct: 341 VALTKRVIMDRDTYDVKWGFGTRS 364
>gi|70933703|ref|XP_738187.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514195|emb|CAH75164.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 246
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 114/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DE+ LR++I PLE LL+ RI++K
Sbjct: 16 MQELRRVKSGNMTEYDNMCTLHDIMDAQYIYDTTGDETYLRKIITPLEKLLINFPRIVIK 75
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I++ EIV+++TKGEAVALA+AQMT++ +AT DHG+
Sbjct: 76 DSAVNAICYGAKLTIPGVLRFDNNIDVYSEIVLMTTKGEAVALAIAQMTSTVIATVDHGI 135
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA KRVIMDRDTY KWG G +S
Sbjct: 136 VALTKRVIMDRDTYDVKWGFGNRS 159
>gi|209881941|ref|XP_002142408.1| H/ACA ribonucleoprotein complex subunit 4 [Cryptosporidium muris
RN66]
gi|209558014|gb|EEA08059.1| H/ACA ribonucleoprotein complex subunit 4, putative
[Cryptosporidium muris RN66]
Length = 462
Score = 187 bits (474), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA Y+ D KDES +RRV+ PLE LL R+++K
Sbjct: 224 MQELRRVRSGCLSENDNMVTMHDVLDAQYVLDNLKDESYMRRVVSPLEILLTDLPRVVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR++ I++D EIV+++TKGEA+A+ +AQMTT+ +AT DHGV
Sbjct: 284 DSCVNAICYGAKLMIPGVLRFDSNIDVDTEIVMMTTKGEAIAIGIAQMTTAVIATVDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 344 VAVIKRVIMERDTYDLRWGYGPRA 367
>gi|66359506|ref|XP_626931.1| Cbf5p; centromere-binding factor 5 like PUA domain containing
protein with a type I pseudouridine synthase domain
[Cryptosporidium parvum Iowa II]
gi|46228344|gb|EAK89243.1| Cbf5p; centromere-binding factor 5 like PUA domain containing
protein with a type I pseudouridine synthase domain
[Cryptosporidium parvum Iowa II]
Length = 520
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HDI DA Y+ D ++DES LRR+I PLE LL RI++K
Sbjct: 226 MQELRRVRSGCLSENDNMVTMHDILDAQYMLDNYRDESYLRRIISPLELLLTDLPRIVVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+++GI++ E+V+++TKGEA+A+ +AQMTT+ +A+ DHGV
Sbjct: 286 DSCVNAICYGAKLMIPGVLRFDNGIDVGTEVVMMTTKGEAIAIGVAQMTTAVIASVDHGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 346 VAIIKRVIMERDTYDMRWGHGPRA 369
>gi|67595141|ref|XP_665978.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656867|gb|EAL35749.1| hypothetical protein Chro.30435 [Cryptosporidium hominis]
Length = 518
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HDI DA Y+ D ++DES LRR+I PLE LL RI++K
Sbjct: 224 MQELRRVRSGCLSENDNMVTMHDILDAQYMLDNYRDESYLRRIISPLELLLTDLPRIVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+++GI++ E+V+++TKGEA+A+ +AQMTT+ +A+ DHGV
Sbjct: 284 DSCVNAICYGAKLMIPGVLRFDNGIDVGTEVVMMTTKGEAIAIGVAQMTTAVIASVDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 344 VAIIKRVIMERDTYDMRWGHGPRA 367
>gi|221060356|ref|XP_002260823.1| tRNA pseudouridine synthase [Plasmodium knowlesi strain H]
gi|193810897|emb|CAQ42795.1| tRNA pseudouridine synthase, putative [Plasmodium knowlesi strain
H]
Length = 475
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/144 (59%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA ++YD DES LR++I PLE LL+ RI++K
Sbjct: 217 MQELRRVKSGNMTEYDNMCTLHDILDAQHVYDTTGDESYLRKIITPLEKLLINFPRIVIK 276
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+++ E+V+++TKGEAVALA+AQMT+S +AT DHGV
Sbjct: 277 DSAVNAICYGAKLTIPGVLRFDNNIDVNSEVVLMTTKGEAVALAIAQMTSSVIATVDHGV 336
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ KRVIMDRDTY KWG G +S
Sbjct: 337 VSLTKRVIMDRDTYDVKWGYGTRS 360
>gi|323510129|dbj|BAJ77958.1| cgd3_3850 [Cryptosporidium parvum]
Length = 518
Score = 186 bits (472), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HDI DA Y+ D ++DES LRR+I PLE LL RI++K
Sbjct: 224 MQELRRVRSGCLSENDNMVTMHDILDAQYMLDNYRDESYLRRIISPLELLLTDLPRIVVK 283
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+++GI++ E+V+++TKGEA+A+ +AQMTT+ +A+ DHGV
Sbjct: 284 DSCVNAICYGAKLMIPGVLRFDNGIDVGTEVVMMTTKGEAIAIGVAQMTTAVIASVDHGV 343
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 344 VAIIKRVIMERDTYDMRWGHGPRA 367
>gi|389585788|dbj|GAB68518.1| tRNA pseudouridine synthase [Plasmodium cynomolgi strain B]
Length = 450
Score = 186 bits (472), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/144 (59%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA ++YD DE+ LR++I PLE LL+ RI++K
Sbjct: 217 MQELRRVKSGNMTEYDNMCTLHDILDAQHVYDTTGDETYLRKIITPLEKLLINFPRIVIK 276
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+++ EIV+++TKGEAVALA+AQMT+S +AT DHGV
Sbjct: 277 DSAVNAICYGAKLTIPGVLRFDNNIDVNSEIVLMTTKGEAVALAIAQMTSSVIATVDHGV 336
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ KRVIMDRDTY KWG G +S
Sbjct: 337 VSLTKRVIMDRDTYDVKWGYGTRS 360
>gi|68067978|ref|XP_675908.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495353|emb|CAH99624.1| conserved hypothetical protein [Plasmodium berghei]
Length = 456
Score = 186 bits (471), Expect = 3e-45, Method: Composition-based stats.
Identities = 86/144 (59%), Positives = 114/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DE+ LR++I PLE LL+ RI++K
Sbjct: 213 MQELRRVKSGNMTEYDNMCTLHDIMDAQYIYDTTGDETYLRKIITPLEKLLINFPRIVIK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I++ EIV+++TKGEAVALA+AQMT++ +AT DHG+
Sbjct: 273 DSAVNAICYGAKLTIPGVLRFDNNIDVYSEIVLMTTKGEAVALAIAQMTSTVIATVDHGI 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA KRVIMDRDTY KWG G +S
Sbjct: 333 VALTKRVIMDRDTYDVKWGFGNRS 356
>gi|323509137|dbj|BAJ77461.1| cgd3_3850 [Cryptosporidium parvum]
Length = 219
Score = 186 bits (471), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 86/144 (59%), Positives = 117/144 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HDI DA Y+ D ++DES LRR+I PLE LL RI++K
Sbjct: 15 MQELRRVRSGCLSENDNMVTMHDILDAQYMLDNYRDESYLRRIISPLELLLTDLPRIVVK 74
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++M+PGVLR+++GI++ E+V+++TKGEA+A+ +AQMTT+ +A+ DHGV
Sbjct: 75 DSCVNAICYGAKLMIPGVLRFDNGIDVGTEVVMMTTKGEAIAIGVAQMTTAVIASVDHGV 134
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 135 VAIIKRVIMERDTYDMRWGHGPRA 158
>gi|119874627|gb|ABM05790.1| dyskerin [Gordius aquaticus]
Length = 237
Score = 185 bits (469), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/124 (69%), Positives = 107/124 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE++ +VT+HD+ DA + YD +DES LRR IRPLE LLV HKRI++K
Sbjct: 114 MQELRRVRSGIQSEDEHMVTMHDVMDAQWQYDNQRDESYLRRTIRPLELLLVKHKRIVVK 173
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++MLPG+LRY DGIE++EE+V++STKGEA+AL +AQMTT+ MATC HGV
Sbjct: 174 DSAVNAICYGAKLMLPGLLRYADGIELNEEVVLMSTKGEAIALGIAQMTTAVMATCGHGV 233
Query: 121 VAKI 124
VA I
Sbjct: 234 VATI 237
>gi|294886569|ref|XP_002771763.1| H/ACA ribonucleoprotein complex subunit, putative [Perkinsus
marinus ATCC 50983]
gi|239875525|gb|EER03579.1| H/ACA ribonucleoprotein complex subunit, putative [Perkinsus
marinus ATCC 50983]
Length = 467
Score = 184 bits (468), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 116/144 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D LVT+HD+ DA Y+Y+ + E LRR I PLE +LV + RI+LK
Sbjct: 234 MQELRRVRSGNLGEQDQLVTMHDLLDAQYVYESTRSEEYLRRTIMPLERILVSYPRIVLK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+ GVLR+E+GIE+ +++V+++TKGEAVAL +AQMTT+ +A+ DHG
Sbjct: 294 DSAVNAVCYGAKLMVVGVLRFENGIEVGKDVVLMTTKGEAVALGIAQMTTAVIASVDHGC 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 354 VATIKRVIMERDTYDSRWGYGPRA 377
>gi|294949098|ref|XP_002786051.1| Centromere/microtubule-binding protein CBF5, putative [Perkinsus
marinus ATCC 50983]
gi|239900159|gb|EER17847.1| Centromere/microtubule-binding protein CBF5, putative [Perkinsus
marinus ATCC 50983]
Length = 486
Score = 184 bits (468), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 116/144 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D LVT+HD+ DA Y+Y+ + E LRR I PLE +LV + RI+LK
Sbjct: 235 MQELRRVRSGNLGEQDQLVTMHDLLDAQYVYESTRSEEYLRRTIMPLERILVSYPRIVLK 294
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+ GVLR+E+GIE+ +++V+++TKGEAVAL +AQMTT+ +A+ DHG
Sbjct: 295 DSAVNAVCYGAKLMVVGVLRFENGIEVGKDVVLMTTKGEAVALGIAQMTTAVIASVDHGC 354
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 355 VATIKRVIMERDTYDSRWGYGPRA 378
>gi|294941896|ref|XP_002783294.1| H/ACA ribonucleoprotein complex subunit, putative [Perkinsus
marinus ATCC 50983]
gi|239895709|gb|EER15090.1| H/ACA ribonucleoprotein complex subunit, putative [Perkinsus
marinus ATCC 50983]
Length = 484
Score = 184 bits (467), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 116/144 (80%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+D LVT+HD+ DA Y+Y+ + E LRR I PLE +LV + RI+LK
Sbjct: 234 MQELRRVRSGNLGEQDQLVTMHDLLDAQYVYESTRSEEYLRRTIMPLERILVSYPRIVLK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+ GVLR+E+GIE+ +++V+++TKGEAVAL +AQMTT+ +A+ DHG
Sbjct: 294 DSAVNAVCYGAKLMVVGVLRFENGIEVGKDVVLMTTKGEAVALGIAQMTTAVIASVDHGC 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 354 VATIKRVIMERDTYDSRWGYGPRA 377
>gi|294895715|ref|XP_002775270.1| Centromere/microtubule-binding protein CBF5, putative [Perkinsus
marinus ATCC 50983]
gi|239881344|gb|EER07086.1| Centromere/microtubule-binding protein CBF5, putative [Perkinsus
marinus ATCC 50983]
Length = 485
Score = 184 bits (466), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 87/144 (60%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E D LVT+HD+ DA Y+Y+ + E LRR I PLE +LV + RI+LK
Sbjct: 233 MQELRRVRSGNLGERDQLVTMHDLLDAQYVYESTRSEEYLRRTIMPLERILVSYPRIVLK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+ GVLR+E+GIE+ +++V+++TKGEAVAL +AQMTT+ +A+ DHG
Sbjct: 293 DSAVNAVCYGAKLMVVGVLRFENGIEVGKDVVLMTTKGEAVALGIAQMTTAVIASVDHGC 352
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIM+RDTY +WG GP++
Sbjct: 353 VATIKRVIMERDTYDSRWGYGPRA 376
>gi|119874613|gb|ABM05783.1| dyskerin [Strigamia maritima]
Length = 223
Score = 183 bits (465), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 84/127 (66%), Positives = 108/127 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQ E+ G+VT+HD+ DA + Y+ H+DE LRRVIRPLE LL HKRII+K
Sbjct: 97 MAELRRVRSGIQDEKSGMVTMHDVLDAQWRYEHHQDEDYLRRVIRPLEVLLTSHKRIIMK 156
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+I PG+LR+EDGIE++++IV+V+TKGEA+ LA A MTT+T+A+CDHG+
Sbjct: 157 DSAVNALCYGAKIYHPGILRFEDGIELNQDIVVVTTKGEAICLATALMTTATIASCDHGI 216
Query: 121 VAKIKRV 127
V K+KRV
Sbjct: 217 VTKLKRV 223
>gi|290986444|ref|XP_002675934.1| predicted protein [Naegleria gruberi]
gi|284089533|gb|EFC43190.1| predicted protein [Naegleria gruberi]
Length = 490
Score = 182 bits (463), Expect = 3e-44, Method: Composition-based stats.
Identities = 85/144 (59%), Positives = 113/144 (78%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG SE+D L T+HD+ DA + DES LRR+++PLE LL +KR+I+K
Sbjct: 226 MFELRRVQSGSLSEKDFLYTMHDVLDAQHELKAKGDESYLRRIVKPLEILLTNYKRVIVK 285
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN++C+GAQ+M+PGVLRY+D IE EEIV+++TKGEA+A A A MT+ + + D+GV
Sbjct: 286 DSAVNSICFGAQLMIPGVLRYDDSIETGEEIVLITTKGEAIATAYAVMTSIQIQSMDYGV 345
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K KRVIMDR+TYPR+WG+GP S
Sbjct: 346 VCKTKRVIMDRNTYPRRWGMGPVS 369
>gi|255564868|ref|XP_002523428.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
gi|223537378|gb|EEF39007.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
Length = 432
Score = 176 bits (447), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 77/109 (70%), Positives = 100/109 (91%)
Query: 36 DESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVS 95
DE+ LRRVI PLE LL +KR+++KDSAVNA+CYGA++M+PG+LR+E+ +E+ EE+V+++
Sbjct: 110 DETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 169
Query: 96 TKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
TKGEAVAL +A+MTT+ MATCDHGVVAKIKRV+MDRDTYPRKWGLGPK+
Sbjct: 170 TKGEAVALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPRKWGLGPKA 218
>gi|326480146|gb|EGE04156.1| centromere/microtubule binding protein CBF5 [Trichophyton equinum
CBS 127.97]
Length = 477
Score = 174 bits (441), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 108/142 (76%), Gaps = 17/142 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+DG+VTLHD+ DA ++ D H+DES LR+VIRPLE LL +KRI++K
Sbjct: 221 MQELRRVRSGAMDEKDGMVTLHDVLDAQWMMDNHRDESYLRKVIRPLESLLTSYKRIVVK 280
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A +
Sbjct: 281 DSAVNAVCYGAKLMIPGLLRFEAGIEIYEEVVLMTTKGEAIA-----------------I 323
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WG+GP
Sbjct: 324 VAKVKRCIMERDLYPRRWGMGP 345
>gi|396081419|gb|AFN83036.1| putative rRNA pseudouridine synthase [Encephalitozoon romaleae
SJ-2008]
Length = 357
Score = 170 bits (430), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 112/140 (80%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D + TLHD+ DA+++++ KDE+++RRVIRPLE LLVG+ RI++K
Sbjct: 210 MKELRRTRSGRTSEKD-IFTLHDLLDAVHIFNSEKDETVIRRVIRPLESLLVGYPRIMIK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++ + GVLR++ I++ +EIVI++TKGEAVAL +A +++ M+ DHG+
Sbjct: 269 DSCVNAICYGAKLSVTGVLRFDRNIDVGKEIVIITTKGEAVALGIALVSSPEMSIIDHGL 328
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V + KRVIM++D YPR WG
Sbjct: 329 VCRTKRVIMEKDLYPRSWGF 348
>gi|119874619|gb|ABM05786.1| dyskerin [Triops longicaudatus]
Length = 219
Score = 167 bits (423), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 92/105 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE G+VT+ D+ DA +LYD HKDES LRRVIRPLE LL GHKRII+K
Sbjct: 115 MQELRRVRSGIQSENQGMVTMTDVHDAQWLYDNHKDESYLRRVIRPLEALLTGHKRIIMK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALAL 105
DSAVNAVCYGA+IMLPGVLRYEDGIE+++EIVI++ KGEA+AL +
Sbjct: 175 DSAVNAVCYGAKIMLPGVLRYEDGIELNQEIVIMTVKGEAIALGI 219
>gi|123449142|ref|XP_001313293.1| pseudouridine syntase related protein [Trichomonas vaginalis G3]
gi|121895171|gb|EAY00364.1| pseudouridine syntase related protein, putative [Trichomonas
vaginalis G3]
Length = 391
Score = 167 bits (422), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 105/142 (73%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E GLVT+HD+ DA YLYD+ +E LRRVIRPLE +L KRI++K
Sbjct: 209 MAELRRTRSGFTTETCGLVTMHDVLDAKYLYDKEGNEKYLRRVIRPLEWMLRNMKRIVVK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA++A+C+GA I +PG++R+++ IE +++V+++ KGEA+ALA+A MT M+ V
Sbjct: 269 DSAIDAICHGAPIYIPGIMRFDNTIETGDQVVVITAKGEAIALAIATMTAQQMSVNQKDV 328
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
A +KRVIMDR TY + WG GP
Sbjct: 329 AATLKRVIMDRGTYVKSWGKGP 350
>gi|401826417|ref|XP_003887302.1| putative centromere/microtubule binding protein 5 [Encephalitozoon
hellem ATCC 50504]
gi|392998461|gb|AFM98321.1| putative centromere/microtubule binding protein 5 [Encephalitozoon
hellem ATCC 50504]
Length = 357
Score = 166 bits (421), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 78/140 (55%), Positives = 110/140 (78%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D + TLHD+ DA+Y+++ KDE ++RRVIRPLE LLVG+ RI++K
Sbjct: 210 MKELRRIRSGRTSEKD-IFTLHDLLDAVYIFNSTKDERVIRRVIRPLESLLVGYPRIMIK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++ + GVLR++ I++ E+VI++TKGEAVAL +A +++ M+ DHG+
Sbjct: 269 DSCVNAICYGAKLSIMGVLRFDRDIDVGREVVIITTKGEAVALGVALVSSPEMSIIDHGL 328
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V + KRVIM++D YPR WG
Sbjct: 329 VCRTKRVIMEKDLYPRSWGF 348
>gi|387593663|gb|EIJ88687.1| centromere/microtubule-binding protein CBF5 [Nematocida parisii
ERTm3]
gi|387597319|gb|EIJ94939.1| centromere/microtubule-binding protein CBF5 [Nematocida parisii
ERTm1]
Length = 422
Score = 165 bits (417), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 109/144 (75%), Gaps = 2/144 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M++LRR RSG SE D LVT+HD+ DAMYL+ + D+S LR V++PLE LLVG+ R+I+K
Sbjct: 230 MVDLRRTRSGAVSE-DNLVTMHDVLDAMYLHQKTMDQSYLRAVVQPLESLLVGYPRVIIK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS +NA+CYG Q+ GVLRY D + IV+VS KGEAVALA+A +T+ ++ +HGV
Sbjct: 289 DSCINAICYGGQLTAKGVLRYGD-FNHKDTIVLVSPKGEAVALAVALVTSPQLSMMEHGV 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V + KRVIM++DTY R+W LGP++
Sbjct: 348 VCRTKRVIMNKDTYQRQWKLGPQA 371
>gi|19173642|ref|NP_597445.1| CENTROMERE/MICROTUBULE BINDING PROTEIN [Encephalitozoon cuniculi
GB-M1]
gi|19170848|emb|CAD26622.1| CENTROMERE/MICROTUBULE BINDING PROTEIN [Encephalitozoon cuniculi
GB-M1]
Length = 357
Score = 164 bits (416), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 77/140 (55%), Positives = 109/140 (77%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D TLHD+ DA+Y+++ KDE+++RRVI PLE LLVG+ RI++K
Sbjct: 210 MKELRRTRSGRISEKDAF-TLHDLLDAVYIFNTTKDETVIRRVILPLESLLVGYPRIMIK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++ + GVLR++ I++ E+VI++TKGEAVAL +A +++ M+ DHG+
Sbjct: 269 DSCVNAICYGAKLSITGVLRFDRDIDVGTEVVIMTTKGEAVALGIALVSSPEMSIIDHGL 328
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V + KRVIM++D YPR WG
Sbjct: 329 VCRTKRVIMEKDLYPRSWGF 348
>gi|449329137|gb|AGE95411.1| centromere/microtubule binding protein [Encephalitozoon cuniculi]
Length = 357
Score = 163 bits (412), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE+D TLHD+ DA+Y+++ KDE+++RR I PLE LLVG+ RI++K
Sbjct: 210 MKELRRTRSGRISEKDAF-TLHDLLDAVYIFNTTKDETVIRRAILPLESLLVGYPRIMIK 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS VNA+CYGA++ + GVLR++ I++ E+VI++TKGEAVAL +A +++ M+ DHG+
Sbjct: 269 DSCVNAICYGAKLSITGVLRFDRDIDVGTEVVIMTTKGEAVALGIALVSSPEMSIIDHGL 328
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V + KRVIM++D YPR WG
Sbjct: 329 VCRTKRVIMEKDLYPRSWGF 348
>gi|303389361|ref|XP_003072913.1| putative rRNA pseudouridine synthase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302056|gb|ADM11553.1| putative rRNA pseudouridine synthase [Encephalitozoon intestinalis
ATCC 50506]
Length = 357
Score = 161 bits (407), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 107/137 (78%), Gaps = 1/137 (0%)
Query: 4 LRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSA 63
LRR RSG SE+D + TLHD+ D +++++ KDE ++RRVIRPLE LLVG+ RI++KDS
Sbjct: 213 LRRTRSGRISEKD-IFTLHDLLDGVHIFNSTKDERVIRRVIRPLESLLVGYPRIMIKDSC 271
Query: 64 VNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
VNA+CYGA++ + GVLR++ I++ +IVIV+TKGEAVAL +A +++ M+ DHG+V +
Sbjct: 272 VNAICYGAKLSITGVLRFDRNIDVGMDIVIVTTKGEAVALGIALVSSPEMSIIDHGLVCR 331
Query: 124 IKRVIMDRDTYPRKWGL 140
KRVIM++D YPR WG
Sbjct: 332 TKRVIMEKDLYPRSWGF 348
>gi|378755245|gb|EHY65272.1| rRNA pseudouridine synthase [Nematocida sp. 1 ERTm2]
Length = 421
Score = 160 bits (405), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M++LRR RSG ED LVT+HD+ D+M+L+ DES LR V++PLE LLVG+ RII+K
Sbjct: 230 MVDLRRTRSGA-VHEDSLVTMHDVLDSMHLHQTKMDESYLRAVVKPLESLLVGYPRIIIK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS +N++C+G Q+ GVLRY D + + IV+VS KGEAVALA A +T+ ++ DHG+
Sbjct: 289 DSCINSICFGGQLTAKGVLRYGD-FDHKDTIVLVSPKGEAVALATALVTSPQLSMMDHGI 347
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V K KRVIM++DTY ++W LGP++
Sbjct: 348 VCKTKRVIMNKDTYQKQWKLGPQT 371
>gi|345316965|ref|XP_001517269.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
[Ornithorhynchus anatinus]
Length = 328
Score = 159 bits (403), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 76/134 (56%), Positives = 105/134 (78%), Gaps = 1/134 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D +VT+HD+ DA + YD +KDES LRRVI PLE LL HKR+++K
Sbjct: 71 MQELRRVRSGVMGEKDHMVTMHDVLDAQWQYDNNKDESYLRRVIYPLEKLLTSHKRLVMK 130
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A + T T V
Sbjct: 131 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMATVKKEPVTPVTPVAPV 190
Query: 121 -VAKIKRVIMDRDT 133
VAK+++V++++ +
Sbjct: 191 EVAKVQKVLLNKPS 204
>gi|358439992|pdb|3ZV0|C Chain C, Structure Of The Shq1p-Cbf5p Complex
gi|358439993|pdb|3ZV0|D Chain D, Structure Of The Shq1p-Cbf5p Complex
Length = 195
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 68/97 (70%), Positives = 90/97 (92%)
Query: 46 PLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALAL 105
PLE LLVG+KRI++KDSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+
Sbjct: 67 PLETLLVGYKRIVVKDSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAI 126
Query: 106 AQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGP 142
AQM+T +A+CDHGVVA +KR IM+RD YPR+WGLGP
Sbjct: 127 AQMSTVDLASCDHGVVASVKRCIMERDLYPRRWGLGP 163
>gi|402467120|gb|EJW02475.1| hypothetical protein EDEG_00278 [Edhazardia aedis USNM 41457]
Length = 481
Score = 157 bits (398), Expect = 1e-36, Method: Composition-based stats.
Identities = 77/146 (52%), Positives = 110/146 (75%), Gaps = 6/146 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHK-----DESLLRRVIRPLEGLLVGHK 55
M +LRR++SG+ +E + VTLHD+ D++ Y + E LRRVI+PLE LL+ K
Sbjct: 270 MKDLRRSKSGLITENE-CVTLHDLLDSIKTYTTYNLYPLDKEIYLRRVIKPLESLLLNFK 328
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
RII+KD+AVNAVC+G Q+ +PG+LR++DGIE D EIV+VS+KGEAVA+ ++ + +S M +
Sbjct: 329 RIIIKDTAVNAVCHGGQLTIPGILRFDDGIEKDMEIVLVSSKGEAVAICVSLLFSSEMKS 388
Query: 116 CDHGVVAKIKRVIMDRDTYPRKWGLG 141
DHG+V KIKRV+M+R+ YP+ W LG
Sbjct: 389 LDHGIVCKIKRVVMERNLYPKSWKLG 414
>gi|148697287|gb|EDL29234.1| mCG7986 [Mus musculus]
Length = 358
Score = 155 bits (393), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 69/104 (66%), Positives = 90/104 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALA 104
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMG 346
>gi|253744583|gb|EET00773.1| Centromere/microtubule binding protein CBF5 [Giardia intestinalis
ATCC 50581]
Length = 421
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 102/144 (70%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG +E+ +VTLHD+ D+ + + DES LR+V+ PLE LL +KRI +K
Sbjct: 213 MLELRRVRSGELTEKTNMVTLHDVLDSFWCWKNMGDESYLRKVVMPLEYLLKSYKRIFVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS++NA+ YGA + + GVLRY+ I + + +V+VSTKGEAVAL A M + GV
Sbjct: 273 DSSINALTYGAPLHIQGVLRYDPRISIGDTVVLVSTKGEAVALGTATMGAQDIMGVSRGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+K+KRVIMDRD Y R+WGLGP +
Sbjct: 333 VSKVKRVIMDRDLYDRQWGLGPTA 356
>gi|308161234|gb|EFO63690.1| Centromere/microtubule binding protein CBF5 [Giardia lamblia P15]
Length = 313
Score = 153 bits (387), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/144 (52%), Positives = 102/144 (70%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG +E+ LVTLHD+ D+ + + DES LR+V+ PLE LL +KRI +K
Sbjct: 105 MLELRRVRSGELTEKTNLVTLHDVLDSFWCWKNLGDESYLRKVVMPLEYLLKSYKRIFVK 164
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS++NA+ YGA + + GVLRY+ I + + +V+VSTKGEAVAL A M + G+
Sbjct: 165 DSSINALTYGAPLHIQGVLRYDPRISIGDTVVLVSTKGEAVALGTATMGAQDIMGVSRGI 224
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+K+KRVIMDRD Y R+WGLGP +
Sbjct: 225 VSKVKRVIMDRDLYDRQWGLGPTA 248
>gi|390480418|ref|XP_002763476.2| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Callithrix
jacchus]
Length = 506
Score = 153 bits (386), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 105/144 (72%), Gaps = 9/144 (6%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+ + + +P L E G+ D+ + + A+AL MTT+ ++TCDHG+
Sbjct: 303 DSAVS-----SSLGVP--LAVELGLIDDQFFPLQIILFFSAAIAL--MTTAVISTCDHGI 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 354 VAKIKRVIMERDTYPRKWGLGPKA 377
>gi|429961806|gb|ELA41350.1| tRNA pseudouridine synthase B [Vittaforma corneae ATCC 50505]
Length = 339
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/140 (49%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +SG+ +E D VTLHD++DA Y+Y + +E LR+V+RPLE LLV + RI+++
Sbjct: 192 MADLRRTQSGLTTE-DECVTLHDVQDAYYMYKKTGEERYLRKVVRPLETLLVSYPRIMIR 250
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYG Q+ +PGVLRY+ + + +V+++ KGEAVA+A + +S +A + G+
Sbjct: 251 DSAVNAICYGGQLSVPGVLRYDRDFDTNSTVVLMTAKGEAVAIAQPLVASSQLAEMERGI 310
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
+ K KRVIM++D YPR WG+
Sbjct: 311 ITKTKRVIMEKDLYPRVWGI 330
>gi|119874621|gb|ABM05787.1| dyskerin [Sycon sp. SJB-2006]
Length = 233
Score = 152 bits (385), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 69/106 (65%), Positives = 91/106 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQ+E +GLVT+HD+ DA + D KDE+ +RRV++PLE LL GHKR+++K
Sbjct: 115 MQELRRVRSGIQNENEGLVTMHDVLDAQWSLDNCKDETYMRRVVKPLEALLTGHKRLVVK 174
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALA 106
DSAVNA+CYGA++M+PG+LRYE GIE+++EIVI+STKGE VAL +A
Sbjct: 175 DSAVNAICYGAKLMIPGLLRYESGIELNQEIVIMSTKGEXVALGIA 220
>gi|159107547|ref|XP_001704052.1| Centromere/microtubule binding protein CBF5 [Giardia lamblia ATCC
50803]
gi|157432101|gb|EDO76378.1| Centromere/microtubule binding protein CBF5 [Giardia lamblia ATCC
50803]
Length = 421
Score = 152 bits (385), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 102/144 (70%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG +E+ +VTLHD+ D+ + + DES LR+V+ PLE LL +KRI +K
Sbjct: 213 MLELRRVRSGELTEKTNMVTLHDVLDSFWCWKNLGDESYLRKVVMPLEYLLKSYKRIFVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS++NA+ YGA + + GVLRY+ I + + +V+VSTKGEAVAL A M + G+
Sbjct: 273 DSSINALTYGAPLHIQGVLRYDPRISIGDTVVLVSTKGEAVALGTATMGAQDIMGVSRGI 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+K+KRVIMDRD Y R+WGLGP +
Sbjct: 333 VSKVKRVIMDRDLYDRQWGLGPTA 356
>gi|241998150|ref|XP_002433718.1| pseudouridine synthase, putative [Ixodes scapularis]
gi|215495477|gb|EEC05118.1| pseudouridine synthase, putative [Ixodes scapularis]
Length = 407
Score = 152 bits (384), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 103/148 (69%), Gaps = 6/148 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRII-- 58
M ELRR RSGIQ E+ + DA + + SL I PL V I+
Sbjct: 236 MQELRRVRSGIQDEKVTSSGAEGVWDAPWTPRGRETYSLPG--IPPLPNSNVTKDWIVKV 293
Query: 59 LKDSA--VNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
L SA VNAVCYGA++MLPGVLRYED I++++EIVI++TKGEA+ L +A MTTST+ TC
Sbjct: 294 LHTSAAQVNAVCYGAKVMLPGVLRYEDNIDLNDEIVIITTKGEAICLGIALMTTSTITTC 353
Query: 117 DHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
DHG+VAKIKRV+M+RDTYPRKWGLGP +
Sbjct: 354 DHGIVAKIKRVVMERDTYPRKWGLGPNA 381
>gi|47157052|gb|AAT12405.1| centromere/microtubule binding protein-like protein [Antonospora
locustae]
Length = 156
Score = 148 bits (373), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 104/140 (74%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR R+G +E D VT+HDI DA+YL + DES++R+V +PLE LL G+KRI++K
Sbjct: 10 MKDLRRIRTGHFTEYDS-VTMHDILDAIYLLNTRGDESVVRKVFQPLEVLLKGYKRIMVK 68
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS V A+C GAQ+ + G+++YE IE+ +EIV+++TKGEAVALA A++++ + +HG+
Sbjct: 69 DSCVGALCAGAQLTINGIVKYEKEIEIGDEIVLMTTKGEAVALAAAKISSVEIGILEHGI 128
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V K KRVIMD+ YP WG
Sbjct: 129 VCKTKRVIMDKGVYPETWGF 148
>gi|119874641|gb|ABM05797.1| dyskerin [Saccoglossus bromophenolosus]
Length = 183
Score = 147 bits (371), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 67/95 (70%), Positives = 83/95 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D +VT+HD+ DA + YD +KDE+ LRRVI+PLE LLV HKRI+LK
Sbjct: 89 MAELRRVRSGIQSESDNMVTMHDVMDARWQYDNNKDETYLRRVIKPLEALLVSHKRIVLK 148
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVS 95
DSAVNA+CYGA+IMLPGVLR+EDGIE++ E+V++S
Sbjct: 149 DSAVNAICYGAKIMLPGVLRFEDGIEVNSEVVVLS 183
>gi|119874647|gb|ABM05800.1| dyskerin [Xenoturbella bocki]
Length = 183
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 84/95 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI SE D +VT+HD+ DA ++YD KDE+ LRRVI+PLEGLL+ HKRI++K
Sbjct: 89 MQELRRNRSGIVSENDNIVTMHDVMDAQWVYDHQKDEAYLRRVIKPLEGLLLTHKRIVMK 148
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVS 95
D+AVNAVCYGA+IMLPGVLR+EDGIE+++ +VI+S
Sbjct: 149 DTAVNAVCYGAKIMLPGVLRFEDGIELNQPVVIMS 183
>gi|119874639|gb|ABM05796.1| dyskerin [Saccoglossus sp. SJB-2006]
Length = 183
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 66/95 (69%), Positives = 83/95 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D +VT+HD+ DA + +D +KDES LRRV++PLE LLV HKRI+LK
Sbjct: 89 MAELRRVRSGIQSESDNMVTMHDVMDARWQHDHNKDESYLRRVVKPLEALLVSHKRIVLK 148
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVS 95
DSAVNA+CYGA+IMLPGVLR+EDGIE++ E+V++S
Sbjct: 149 DSAVNAICYGAKIMLPGVLRFEDGIEINSEVVVLS 183
>gi|291235422|ref|XP_002737644.1| PREDICTED: centromere/microtubule binding protein cbf5,
putative-like [Saccoglossus kowalevskii]
Length = 378
Score = 145 bits (366), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 62/82 (75%), Positives = 76/82 (92%)
Query: 63 AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVA 122
VNA+CYGA+IMLPGVLR+EDGIE++ E+V++STKGEA+ L +A MTT+ MATCDHGV+A
Sbjct: 165 CVNAICYGAKIMLPGVLRFEDGIEINSEVVVLSTKGEAICLGIALMTTAVMATCDHGVIA 224
Query: 123 KIKRVIMDRDTYPRKWGLGPKS 144
KIKRVIM+RDTYPRKWGLGPK+
Sbjct: 225 KIKRVIMERDTYPRKWGLGPKA 246
>gi|399950045|gb|AFP65701.1| pseudouridylate synthase [Chroomonas mesostigmatica CCMP1168]
Length = 375
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 98/141 (69%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
++E+R+ R G +E++ L L D+ DA ++ K+ L+++ P+E LL HKRII+K
Sbjct: 204 LLEIRKIRFGNITEDENLFNLQDLIDAKWISRCLKNNFFLKKIFSPVEFLLSFHKRIIVK 263
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA+N++CYG+++ + G+LR+E IE +E ++++STKGE +AL +++ T+++ D G+
Sbjct: 264 NSAINSLCYGSKLSISGILRFEKNIENEENLILLSTKGEMIALGKSKLNTNSIFKLDVGL 323
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
+ +IM++D YP++WG G
Sbjct: 324 CVFVTSIIMEKDYYPKRWGFG 344
>gi|269859328|ref|XP_002649389.1| centromere/microtubule binding protein cbf5 [Enterocytozoon
bieneusi H348]
gi|220067152|gb|EED44619.1| centromere/microtubule binding protein cbf5 [Enterocytozoon
bieneusi H348]
Length = 355
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 63/140 (45%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +SG +E + TLHD+ DA+YLY ++ +E LR++I+PLE LL+ +KRI++K
Sbjct: 199 MADLRRIKSGNVTEYECF-TLHDLLDAVYLYKKNNNEKYLRKIIKPLESLLINYKRIVIK 257
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV A+C GA++ + GV +Y+ I+ + IVI++ KGEAVAL + + T G
Sbjct: 258 DTAVAAICSGAKLSIQGVFKYDATIDTTDTIVIMTGKGEAVALGTPLICGTEFKTMTTGF 317
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
V K RVIM+ +TYP+ WG+
Sbjct: 318 VCKPIRVIMEENTYPKCWGI 337
>gi|20093573|ref|NP_613420.1| H/ACA RNA-protein complex component Cbf5p [Methanopyrus kandleri
AV19]
gi|37089078|sp|Q8TZ08.1|TRUB_METKA RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|19886426|gb|AAM01350.1| Pseudouridine synthase of the TruB family [Methanopyrus kandleri
AV19]
Length = 338
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/140 (45%), Positives = 91/140 (65%), Gaps = 1/140 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G SEE+ VTLHD+KDA + + E LR V+RP+E L RI ++
Sbjct: 195 MAELRRTRTGPFSEENA-VTLHDVKDAYEFWKEEGWEEPLRHVVRPMEEGLEHLPRIEIR 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GA + PG++R E GI+ + + I + KGEAVAL +A+ T M D G+
Sbjct: 254 DTAVDAICHGANLAAPGIVRVEKGIQPGDLVAIFTLKGEAVALGVAKATWKEMLHADRGI 313
Query: 121 VAKIKRVIMDRDTYPRKWGL 140
+ KRV+M+ TYP+ WGL
Sbjct: 314 MVDTKRVLMEPGTYPKAWGL 333
>gi|410670324|ref|YP_006922695.1| H/ACA RNA-protein complex component Cbf5p [Methanolobus
psychrophilus R15]
gi|409169452|gb|AFV23327.1| H/ACA RNA-protein complex component Cbf5p [Methanolobus
psychrophilus R15]
Length = 346
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 92/143 (64%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR ++G ED LV LH++KDA + + DES LRRV+RPLE L RII++
Sbjct: 203 MQQLRRTKTG-PFREDTLVNLHELKDAYVFWKEDHDESCLRRVVRPLEEGLAHLPRIIVR 261
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA++AVC GA + +PG++ E I D+++ I S KGEAV+L+ A M T M + + G+
Sbjct: 262 DSAIDAVCQGAALAVPGIVSLEKSIRKDDQVCIFSLKGEAVSLSRALMDTEEMFSSEQGL 321
Query: 121 VAKIKRVIMDRDTYPRKWGLGPK 143
A +RVIM TYP+ W P+
Sbjct: 322 AALTERVIMVAGTYPQGWKSKPR 344
>gi|407464263|ref|YP_006775145.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosopumilus
sp. AR2]
gi|407047451|gb|AFS82203.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosopumilus
sp. AR2]
Length = 333
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 94/142 (66%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR R SE DGLVTLH++ DA L+++ KD+S L ++I+P+E L K +I++
Sbjct: 187 MVELRRTRVDQFSERDGLVTLHELADAFALWEEKKDDSKLMKMIKPVELALSELKSVIIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ + + + + KGEAVALA A M+ + G
Sbjct: 247 DSAVDAMCHGAQLAIPGILKISPNLKKGDIVGVYTQKGEAVALAEATMSEEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
+ KR+IM +TYP+KW P
Sbjct: 307 AFETKRIIMAPNTYPKKWRTKP 328
>gi|440493772|gb|ELQ76199.1| Pseudouridine synthase [Trachipleistophora hominis]
Length = 387
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 60/139 (43%), Positives = 94/139 (67%), Gaps = 1/139 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG EE T+HD+ D+ Y+++ DE +RRV+ P+E L +KRI++K
Sbjct: 243 MLELRRTRSGSIREEQCF-TMHDVLDSHYIFENKGDERYIRRVVHPIEYSLRNYKRIMVK 301
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS V+A+C GA++ L GV+R++ I + E++V+++TKGEAV LA ++ + M ++G+
Sbjct: 302 DSCVDALCSGAKLSLNGVIRFDRNINVGEKVVVITTKGEAVVLAETLVSGAEMQINEYGL 361
Query: 121 VAKIKRVIMDRDTYPRKWG 139
VA RVIM++ Y WG
Sbjct: 362 VAHTLRVIMEKGLYKSTWG 380
>gi|284173335|ref|ZP_06387304.1| tRNA pseudouridine synthase B [Sulfolobus solfataricus 98/2]
gi|384433846|ref|YP_005643204.1| pseudouridylate synthase TruB domain-containing protein [Sulfolobus
solfataricus 98/2]
gi|37089644|sp|Q980C3.1|TRUB_SULSO RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|13813542|gb|AAK40720.1| tRNA pseudouridine synthase subunit B (truB) [Sulfolobus
solfataricus P2]
gi|261602000|gb|ACX91603.1| pseudouridylate synthase TruB domain protein [Sulfolobus
solfataricus 98/2]
Length = 251
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LH++ +A+YLY KDE+ LRRV+ P+E +I+++
Sbjct: 110 MRELRRTRSGIFTESTNLVKLHELSEAIYLYKNCKDETELRRVLIPMEFATCEIPKIVIE 169
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PGV+ Y++ + ++ + +++ KGE VA A M + + G+
Sbjct: 170 DSAVNALAYGAQLAVPGVVAYQN-FKKNDTVAVLTLKGELVATGNALMDSEELENAKKGI 228
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 229 VVNLSRVFMQRDIYPKAW 246
>gi|161777478|ref|NP_341930.2| tRNA pseudouridine synthase B [Sulfolobus solfataricus P2]
Length = 239
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LH++ +A+YLY KDE+ LRRV+ P+E +I+++
Sbjct: 98 MRELRRTRSGIFTESTNLVKLHELSEAIYLYKNCKDETELRRVLIPMEFATCEIPKIVIE 157
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PGV+ Y++ + ++ + +++ KGE VA A M + + G+
Sbjct: 158 DSAVNALAYGAQLAVPGVVAYQN-FKKNDTVAVLTLKGELVATGNALMDSEELENAKKGI 216
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 217 VVNLSRVFMQRDIYPKAW 234
>gi|227830701|ref|YP_002832481.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
L.S.2.15]
gi|385773683|ref|YP_005646249.1| H/ACA RNA-protein complex component, Cbf5p [Sulfolobus islandicus
HVE10/4]
gi|227457149|gb|ACP35836.1| PUA domain containing protein [Sulfolobus islandicus L.S.2.15]
gi|323477797|gb|ADX83035.1| H/ACA RNA-protein complex component, Cbf5p [Sulfolobus islandicus
HVE10/4]
Length = 239
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LHD+ +A+YLY KDE+ LRRV+ P+E ++I++
Sbjct: 98 MRELRRTRSGIFTESTNLVKLHDLSEAIYLYKNCKDETELRRVLMPMEYATCEMPKLIIE 157
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PG++ Y++ + ++ + +++ KGE VA A + + + G+
Sbjct: 158 DSAVNALAYGAQLAVPGIVAYQN-FKRNDTVAVLTLKGELVATGNALIDSKELENAKKGI 216
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 217 VVNLSRVFMQRDIYPKAW 234
>gi|238620204|ref|YP_002915030.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
M.16.4]
gi|238381274|gb|ACR42362.1| rRNA pseudouridine synthase [Sulfolobus islandicus M.16.4]
Length = 338
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LHD+ +A+YLY KDE+ LRRV+ P+E ++I++
Sbjct: 197 MRELRRTRSGIFTESTNLVKLHDLSEAIYLYKNCKDETELRRVLMPMEYATCEMPKLIIE 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PG++ Y++ + ++ + +++ KGE VA A + + + G+
Sbjct: 257 DSAVNALAYGAQLAVPGIVAYQN-FKRNDTVAVLTLKGELVATGNALIDSKELENAKKGI 315
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 316 VVNLSRVFMQRDIYPKAW 333
>gi|227827978|ref|YP_002829758.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
M.14.25]
gi|229579607|ref|YP_002838006.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
Y.G.57.14]
gi|229581728|ref|YP_002840127.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
Y.N.15.51]
gi|229585245|ref|YP_002843747.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus islandicus
M.16.27]
gi|227459774|gb|ACP38460.1| rRNA pseudouridine synthase [Sulfolobus islandicus M.14.25]
gi|228010322|gb|ACP46084.1| rRNA pseudouridine synthase [Sulfolobus islandicus Y.G.57.14]
gi|228012444|gb|ACP48205.1| rRNA pseudouridine synthase [Sulfolobus islandicus Y.N.15.51]
gi|228020295|gb|ACP55702.1| rRNA pseudouridine synthase [Sulfolobus islandicus M.16.27]
Length = 339
Score = 122 bits (305), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LHD+ +A+YLY KDE+ LRRV+ P+E ++I++
Sbjct: 198 MRELRRTRSGIFTESTNLVKLHDLSEAIYLYKNCKDETELRRVLMPMEYATCEMPKLIIE 257
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PG++ Y++ + ++ + +++ KGE VA A + + + G+
Sbjct: 258 DSAVNALAYGAQLAVPGIVAYQN-FKRNDTVAVLTLKGELVATGNALIDSKELENAKKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 317 VVNLSRVFMQRDIYPKAW 334
>gi|119719378|ref|YP_919873.1| putative rRNA pseudouridine synthase [Thermofilum pendens Hrk 5]
gi|119524498|gb|ABL77870.1| putative rRNA pseudouridine synthase [Thermofilum pendens Hrk 5]
Length = 338
Score = 121 bits (304), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 89/138 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+ T+HD+ DA Y++ + + LR+V P+E + ++ ++
Sbjct: 192 MQELRRIRSGSLYEDRNCSTMHDVVDAYYIWKERGIDHFLRQVFLPVEAAIQHLPKVWIR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + +PG+++ E GI+++ + I++ KGE VA+ AQMTT M T G+
Sbjct: 252 DSAVDAVCHGAPLAVPGIVKLEGGIKVNSTVAILTLKGELVAIGKAQMTTEKMLTESSGI 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
K + V+MD TYPRKW
Sbjct: 312 AVKTEHVVMDPGTYPRKW 329
>gi|161527914|ref|YP_001581740.1| pseudouridylate synthase subunit TruB [Nitrosopumilus maritimus
SCM1]
gi|160339215|gb|ABX12302.1| pseudouridylate synthase TruB domain protein [Nitrosopumilus
maritimus SCM1]
Length = 332
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 93/144 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E DGLVTLH++ +A L+++ KD+S L+ +I+P+E L K ++++
Sbjct: 187 MIELRRTRVDQFRETDGLVTLHELANAFALWEEKKDDSKLKSMIQPVEHALSELKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA++A+C+GAQ+ +PG+L+ + + + I + KGEAVALA A M+ + G
Sbjct: 247 DSAIDAMCHGAQLAIPGILQISPSLNKGDIVGIYTQKGEAVALAEATMSGQEIQDAVKGY 306
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
+ KR+IM +TYP+KW P S
Sbjct: 307 AFETKRIIMAPNTYPKKWRTKPSS 330
>gi|386876390|ref|ZP_10118508.1| putative rRNA pseudouridine synthase [Candidatus Nitrosopumilus
salaria BD31]
gi|386805797|gb|EIJ65298.1| putative rRNA pseudouridine synthase [Candidatus Nitrosopumilus
salaria BD31]
Length = 333
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 93/144 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR R SE+DGLVTLH++ DA L+++ +D S L ++I+P+E L K ++++
Sbjct: 187 MVELRRTRVDQFSEKDGLVTLHELADAFALWEEKQDASKLMKMIKPVEYALSELKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ + + I + KGEAVALA A M+ + G
Sbjct: 247 DSAVDAMCHGAQLAIPGILKISPNLKKGDIVGIYTQKGEAVALAEAAMSEEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
R+IM +TYP+KW P +
Sbjct: 307 AFVTNRIIMAPNTYPKKWRTKPTT 330
>gi|385776318|ref|YP_005648886.1| H/ACA RNA-protein complex component, Cbf5p [Sulfolobus islandicus
REY15A]
gi|323475066|gb|ADX85672.1| H/ACA RNA-protein complex component, Cbf5p [Sulfolobus islandicus
REY15A]
Length = 239
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LH++ +A+YLY KDE+ LRRV+ P+E ++I++
Sbjct: 98 MRELRRTRSGIFTESTNLVKLHNLSEAIYLYKNCKDETELRRVLMPMEYATCEMPKLIIE 157
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ YGAQ+ +PG++ Y++ + ++ + +++ KGE VA A + + + G+
Sbjct: 158 DSAVNALAYGAQLAVPGIVAYQN-FKRNDTVAVLTLKGELVATGNALIDSKELENAKKGI 216
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RV M RD YP+ W
Sbjct: 217 VVNLSRVFMQRDIYPKAW 234
>gi|294495990|ref|YP_003542483.1| tRNA pseudouridine synthase B [Methanohalophilus mahii DSM 5219]
gi|292666989|gb|ADE36838.1| tRNA pseudouridine synthase B [Methanohalophilus mahii DSM 5219]
Length = 342
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G +E LVTLHD+KDA + ++ DE LRR+IRP+E LV I ++
Sbjct: 198 MQQLRRVGTG-PFDESSLVTLHDLKDAFVFWQENGDEEHLRRIIRPMEEALVNLPHITIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + +PG++ ++ I+ ++ + S KGE VALA A M +S + G+
Sbjct: 257 DSAVSAICHGAALTVPGIVGFDSDIQKKGDVAVFSLKGEIVALAKASMDSSEILNLSSGI 316
Query: 121 VAKIKRVIMDRDTYPRKWG 139
A +RVIM+ D YP +W
Sbjct: 317 AAITERVIMNDDVYPSRWN 335
>gi|336477134|ref|YP_004616275.1| rRNA pseudouridine synthase [Methanosalsum zhilinae DSM 4017]
gi|335930515|gb|AEH61056.1| rRNA pseudouridine synthase [Methanosalsum zhilinae DSM 4017]
Length = 333
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 89/138 (64%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G ED VTLHD+ DA + +H DES LRRVI P+E L ++++
Sbjct: 193 MQELRRTKTG-PFNEDTAVTLHDVTDAYTFWKEHGDESELRRVILPMEEGLKHLPPVVIR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + +PG++ + I+ D+ + I + KGEAVAL+ A MTT + D G+
Sbjct: 252 DSAVDAICQGASLAVPGIVSLDSMIKKDDTVCIYTLKGEAVALSRAVMTTDEILEKDSGI 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA +RVI+D TYP W
Sbjct: 312 VAVTERVIIDAGTYPSAW 329
>gi|407461931|ref|YP_006773248.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosopumilus
koreensis AR1]
gi|407045553|gb|AFS80306.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosopumilus
koreensis AR1]
Length = 331
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 92/142 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E DGLVTLH++ +A L+++ KD+S L+ +I+P+E L K +I++
Sbjct: 187 MIELRRTRVDQFRETDGLVTLHELANAFALWEEKKDDSKLKSMIKPVELALSELKSVIIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ + + I + KGEAVALA + M + G
Sbjct: 247 DSAVDAMCHGAQLAIPGILKISPNLKKGDIVGIYTQKGEAVALAESTMDEEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
+ KR+IM +TYP+KW P
Sbjct: 307 AFETKRIIMAPNTYPKKWRTKP 328
>gi|330508472|ref|YP_004384900.1| rRNA pseudouridine synthase [Methanosaeta concilii GP6]
gi|328929280|gb|AEB69082.1| rRNA pseudouridine synthase, putative [Methanosaeta concilii GP6]
Length = 308
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 92/141 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LVTLH + DA Y + +E+LLRRVI P+E LV R+++
Sbjct: 156 MEELRRTRAGPFREDETLVTLHQLIDAHVKYMETGNENLLRRVILPVEAALVHLPRLVIA 215
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D++V+A+C+GA + PG+L + I + +V+ + KGEAVA+A A++++ M G+
Sbjct: 216 DNSVDAICHGAPLAAPGLLSLQTEINRGDGVVLFTLKGEAVAVAQAELSSEEMLASKSGI 275
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
VA +RVIM+ TYP+ W L
Sbjct: 276 VAATERVIMEPGTYPKAWKLA 296
>gi|70606602|ref|YP_255472.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus
acidocaldarius DSM 639]
gi|68567250|gb|AAY80179.1| tRNA pseudouridine synthase [Sulfolobus acidocaldarius DSM 639]
Length = 319
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E+ +VTL ++ +++YLY KDES LRR++ P+E + G ++I+
Sbjct: 182 MRELRRIRSGIFTEKTNMVTLQEVSESLYLYRNCKDESELRRILLPMEYGVCGIPKVIVS 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNA+ YGA++ LPG+L Y++ ++++ +++ KGE VA+ + + + + + G
Sbjct: 242 DTAVNAITYGAKLNLPGILAYQN-FRKNQDVAVLTLKGELVAIGESIVESKQLESGKKGE 300
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + KR+ M+RD YP+ W
Sbjct: 301 VIRPKRIFMERDIYPKSW 318
>gi|116754990|ref|YP_844108.1| putative rRNA pseudouridine synthase [Methanosaeta thermophila PT]
gi|116666441|gb|ABK15468.1| tRNA pseudouridine synthase B [Methanosaeta thermophila PT]
Length = 321
Score = 118 bits (296), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 90/138 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G +E++ LVTLH++KDA ++ + DES LRR + P+E L +++
Sbjct: 177 MEELRRTKAGPFAEDETLVTLHNLKDAYEIWRESGDESALRRAVLPVERALRHLPGLVIS 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GA + PG+L E I + +VI + KGEAVA+ A++++ M G+
Sbjct: 237 DNAVDAICHGAPLAAPGLLSLETDINKGDFVVIYTLKGEAVAIGRAKLSSDEMMVAKSGI 296
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA +RVIMD YPR+W
Sbjct: 297 VASTERVIMDPGVYPRRW 314
>gi|449066823|ref|YP_007433905.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus
acidocaldarius N8]
gi|449069095|ref|YP_007436176.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus
acidocaldarius Ron12/I]
gi|449035331|gb|AGE70757.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus
acidocaldarius N8]
gi|449037603|gb|AGE73028.1| H/ACA RNA-protein complex component Cbf5p [Sulfolobus
acidocaldarius Ron12/I]
Length = 235
Score = 118 bits (296), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 94/138 (68%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E+ +VTL ++ +++YLY KDES LRR++ P+E + G ++I+
Sbjct: 98 MRELRRIRSGIFTEKTNMVTLQEVSESLYLYRNCKDESELRRILLPMEYGVCGIPKVIVS 157
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNA+ YGA++ LPG+L Y++ ++++ +++ KGE VA+ + + + + + G
Sbjct: 158 DTAVNAITYGAKLNLPGILAYQN-FRKNQDVAVLTLKGELVAIGESIVESKQLESGKKGE 216
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + KR+ M+RD YP+ W
Sbjct: 217 VIRPKRIFMERDIYPKSW 234
>gi|124028184|ref|YP_001013504.1| H/ACA RNA-protein complex component Cbf5p [Hyperthermus butylicus
DSM 5456]
gi|123978878|gb|ABM81159.1| predicted pseudouridine synthase [Hyperthermus butylicus DSM 5456]
Length = 345
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 89/138 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +GLV L ++ +A+Y + Q E LLR+ I P+E + +I+++
Sbjct: 204 MRELRRTRSGPFRERNGLVRLQELSEAIYRWKQEGKEDLLRKYILPIEYAVSHLPKIVVR 263
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+ +GA + +PG+ R +GI+ + + +++ KGE VA+ +AQM++ +A G+
Sbjct: 264 DTAVDAIAHGANLAVPGIARLHEGIKRGDLVALLTLKGELVAIGVAQMSSEEIAKAKKGI 323
Query: 121 VAKIKRVIMDRDTYPRKW 138
KI+RVIM YPR W
Sbjct: 324 AVKIRRVIMPPGVYPRAW 341
>gi|167045203|gb|ABZ09863.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine crenarchaeote HF4000_APKG8O8]
Length = 339
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 86/138 (62%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR R E LVTLH + DA + + KD + L ++I P+E L K I+++
Sbjct: 187 MVELRRTRVNQFHENHPLVTLHQVADAFSDWKEKKDSTKLLKLIHPIENALSELKSIVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ DE + I + KGE VALA + M+ T+ G
Sbjct: 247 DSAVDALCHGAQLAIPGILQISPNLQKDELVGIYTQKGEVVALAQSSMSGETIEETPKGH 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ KR+IM +TYP+KW
Sbjct: 307 AFETKRIIMAPNTYPKKW 324
>gi|212373370|dbj|BAE96943.2| Cbf5 [Sulfolobus metallicus]
Length = 278
Score = 116 bits (290), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 91/139 (65%), Gaps = 2/139 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+GI E + LVT+H+ +A+Y++ KDES +R++I P+E G +I++
Sbjct: 135 MRELRRTRTGIFDERN-LVTMHEFSEAVYMWKNCKDESFIRKIIMPMEIATCGIPKIMVD 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
++AV+A+ YGA++ PGV+ ++ + D+ + +++TKGE V++ A M +A D G
Sbjct: 194 NNAVSAIAYGAKLTAPGVVGFQQ-FKKDDVVCVITTKGELVSVGKALMDYRRLAKVDKGE 252
Query: 121 VAKIKRVIMDRDTYPRKWG 139
VA RV +DRD YP+ WG
Sbjct: 253 VASTDRVFIDRDVYPKHWG 271
>gi|435852111|ref|YP_007313697.1| rRNA pseudouridine synthase, putative [Methanomethylovorans
hollandica DSM 15978]
gi|433662741|gb|AGB50167.1| rRNA pseudouridine synthase, putative [Methanomethylovorans
hollandica DSM 15978]
Length = 339
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 91/138 (65%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +L R R+G D VTL ++KDA L+ + E LRRV+RP+E L RII++
Sbjct: 195 MQQLIRTRTG-PFTGDTAVTLQELKDAFVLWKEGCSEDELRRVVRPMEEGLAHLPRIIVR 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + +PG++ + GI+ ++++ I + KGEAVA+A A+M T+ + +G+
Sbjct: 254 DSAVDALCHGASLAVPGIVSLDPGIKHEQQVCIFTLKGEAVAIATAKMDTAGIMDASNGL 313
Query: 121 VAKIKRVIMDRDTYPRKW 138
A +RVIMD D YP+ W
Sbjct: 314 AAYTERVIMDVDVYPKCW 331
>gi|386001159|ref|YP_005919458.1| putative tRNA pseudouridine synthase B [Methanosaeta harundinacea
6Ac]
gi|357209215|gb|AET63835.1| putative tRNA pseudouridine synthase B [Methanosaeta harundinacea
6Ac]
Length = 332
Score = 115 bits (289), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 91/139 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLH+++DA ++ + DE+ LRR + P+E L +++
Sbjct: 191 MEELRRTRSGPFREDETLVTLHELQDAKVIWRETGDETPLRRAVLPVERALSHMPTLVIS 250
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+A+C+GA + PG+LR E GIE E++VI + KGEAVA+A+A M + M G+
Sbjct: 251 DGAVDAICHGAPLAAPGLLRLESGIEEGEKVVIYTLKGEAVAVAVAAMGSEDMMKSATGI 310
Query: 121 VAKIKRVIMDRDTYPRKWG 139
VAK RV+M TYP+ W
Sbjct: 311 VAKTSRVVMAPGTYPKMWA 329
>gi|91772110|ref|YP_564802.1| H/ACA RNA-protein complex component Cbf5p [Methanococcoides
burtonii DSM 6242]
gi|91711125|gb|ABE51052.1| tRNA pseudouridine synthase B [Methanococcoides burtonii DSM 6242]
Length = 331
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 87/138 (63%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G ED LV+L+D+KDA + + DES LR+++RP+E L +II++
Sbjct: 192 MKQLRRTGTG-PFREDTLVSLYDLKDACVFWQEDGDESELRKLVRPMEEGLSHLPKIIIR 250
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC GA + +PG++ + I+ D++I + + KGEAVAL + M + HG+
Sbjct: 251 DSAVDAVCRGASLAVPGIVSFSKCIQKDDKIAVFTLKGEAVALCRSFMNADELENESHGI 310
Query: 121 VAKIKRVIMDRDTYPRKW 138
+RVIMD YPR W
Sbjct: 311 ACITERVIMDAAIYPRCW 328
>gi|15668320|ref|NP_247116.1| H/ACA RNA-protein complex component Cbf5p [Methanocaldococcus
jannaschii DSM 2661]
gi|3915195|sp|Q57612.1|TRUB_METJA RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|1590909|gb|AAB98132.1| centromere/microtubule-binding protein (cbf5) [Methanocaldococcus
jannaschii DSM 2661]
Length = 336
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+D V L D+ DA + + DE LRRVI+P+E L K++++K
Sbjct: 196 MQELRRTKSGCFEEKDA-VYLQDLLDAYVFWKEDGDEEELRRVIKPMEYGLRHLKKVVVK 254
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E +++ + KGEAVA+ A M T + D GV
Sbjct: 255 DSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNADKGV 314
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV MDR TYPR W
Sbjct: 315 AVDVERVYMDRGTYPRMW 332
>gi|83754023|pdb|2APO|A Chain A, Crystal Structure Of The Methanococcus Jannaschii Cbf5
Nop10 Complex
Length = 357
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+D V L D+ DA + + DE LRRVI+P+E L K++++K
Sbjct: 217 MQELRRTKSGCFEEKDA-VYLQDLLDAYVFWKEDGDEEELRRVIKPMEYGLRHLKKVVVK 275
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E +++ + KGEAVA+ A M T + D GV
Sbjct: 276 DSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNADKGV 335
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV MDR TYPR W
Sbjct: 336 AVDVERVYMDRGTYPRMW 353
>gi|159040742|ref|YP_001539994.1| H/ACA RNA-protein complex component Cbf5p [Caldivirga
maquilingensis IC-167]
gi|157919577|gb|ABW01004.1| putative rRNA pseudouridine synthase [Caldivirga maquilingensis
IC-167]
Length = 335
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G EE+ V L+ +++A L+ + DESLLRR+IRP+E +++ RI ++
Sbjct: 191 MRELRRTRVGCFREEN-TVNLNTLREAYSLWRDYGDESLLRRLIRPVEEMVIHLPRIYIR 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+ +GA + PGV + E+GI + + +++ KGE VALA + +T+ + + G+
Sbjct: 250 DSAVDAIAHGASLAAPGVAKVEEGIRSGQLVALMTLKGELVALAESTASTNEILNMNRGI 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
VAK RVIM R YP W
Sbjct: 310 VAKPTRVIMPRGVYPSTW 327
>gi|393796299|ref|ZP_10379663.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosoarchaeum
limnia BG20]
Length = 332
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 88/138 (63%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E DGLVTLH++ +A L+ + DE+ L +I+P+E L K ++++
Sbjct: 187 MIELRRTRVDQFYESDGLVTLHELANAYALWKEKNDETKLLSMIKPIEYALSELKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ + + I + KGEAVALA + M+ + G
Sbjct: 247 DSAVDALCHGAQLAIPGILQISPDLKKGDIVAIYTQKGEAVALAESMMSEEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ R+IM +TYP+KW
Sbjct: 307 AFETNRIIMAPNTYPKKW 324
>gi|242398328|ref|YP_002993752.1| Probable tRNA pseudouridine synthase B [Thermococcus sibiricus MM
739]
gi|242264721|gb|ACS89403.1| Probable tRNA pseudouridine synthase B [Thermococcus sibiricus MM
739]
Length = 339
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 85/138 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ DA Y + + E RR I+P+E + ++ ++
Sbjct: 202 MSELRRTRSGPFKEDETLVTLHDLIDAYYFWKEDGIEEYFRRAIQPMEKAVEHLPKVWIR 261
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV A+ +GA + +PG+++ GI+ D+ + I++ K E VAL A+M T M T G+
Sbjct: 262 DSAVAAITHGADLAVPGIVKLHKGIKPDDLVAIMTLKDELVALGKAKMNTQEMLTKTKGI 321
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 322 AVDVEKVFMPRDWYPKMW 339
>gi|340344269|ref|ZP_08667401.1| Pseudouridylate synthase TruB domain protein [Candidatus
Nitrosoarchaeum koreensis MY1]
gi|339519410|gb|EGP93133.1| Pseudouridylate synthase TruB domain protein [Candidatus
Nitrosoarchaeum koreensis MY1]
Length = 332
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 89/138 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR + E DGLVTLH++ +A L+++ KDE+ L +I+P+E L + ++++
Sbjct: 187 MIELRRTKVDQFHESDGLVTLHELANAYALWEEKKDETKLMSMIKPIEYALSELRSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ + + + I + KGEAVALA + M+ + G
Sbjct: 247 DSAVDALCHGAQLAMPGILQISPNLRKGDIVAIYTQKGEAVALAESLMSEEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ KR+IM + YP+KW
Sbjct: 307 AFETKRIIMAPNIYPKKW 324
>gi|289191620|ref|YP_003457561.1| rRNA pseudouridine synthase [Methanocaldococcus sp. FS406-22]
gi|288938070|gb|ADC68825.1| rRNA pseudouridine synthase [Methanocaldococcus sp. FS406-22]
Length = 336
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+D V L D+ DA + + DE LRRVI+P+E L K++++K
Sbjct: 196 MQELRRVKSGCFEEKDA-VYLQDLVDAYVFWKEDGDEEELRRVIKPMEYGLSHLKKVVVK 254
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E +++ + KGEAVA+ A M T + D G+
Sbjct: 255 DSAVDAICHGADVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNADKGI 314
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV MDR TYPR W
Sbjct: 315 AVDVERVYMDRGTYPRMW 332
>gi|329766344|ref|ZP_08257890.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosoarchaeum
limnia SFB1]
gi|329137113|gb|EGG41403.1| pseudouridylate synthase subunit TruB [Candidatus Nitrosoarchaeum
limnia SFB1]
Length = 332
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 88/138 (63%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E DGLVTLH++ +A L+ + DE+ L +I+P+E L K ++++
Sbjct: 187 MIELRRTRVDQFYESDGLVTLHELANAYALWKEKNDETKLLSMIKPIEYALSELKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ ++ + + I + KGEA+ALA + M+ + G
Sbjct: 247 DSAVDALCHGAQLAIPGILQISPDLKKGDIVAIYTQKGEAIALAESMMSGEEIRDATKGY 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ R+IM +TYP+KW
Sbjct: 307 AFETNRIIMAPNTYPKKW 324
>gi|20089974|ref|NP_616049.1| H/ACA RNA-protein complex component Cbf5p [Methanosarcina
acetivorans C2A]
gi|37089065|sp|Q8TRR5.1|TRUB_METAC RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|19914936|gb|AAM04529.1| rRNA pseudouridine synthase [Methanosarcina acetivorans C2A]
Length = 338
Score = 112 bits (281), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR ++G +E+ LVTLH++KDA + + DES LRRVIRP+E + +IIL+
Sbjct: 193 MQALRRTKAGPFTEKT-LVTLHELKDAYVFWKEDGDESELRRVIRPMESAVSHLPKIILR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC GA + +PG+ + + E + + KGE VALA A+M T + G+
Sbjct: 252 DSAVDAVCSGASLAVPGITSLDSSLAEGELAALFTLKGELVALAKAEMNTEEILKASAGI 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
A RV+M+ TYP+ W
Sbjct: 312 AASPIRVLMEAGTYPKGW 329
>gi|21228256|ref|NP_634178.1| H/ACA RNA-protein complex component Cbf5p [Methanosarcina mazei
Go1]
gi|37089030|sp|Q8PV20.1|TRUB_METMA RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|20906713|gb|AAM31850.1| tRNA pseudouridine synthase [Methanosarcina mazei Go1]
Length = 338
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR ++G +E+ L+TLH++KDA + + DES LRRVIRP+E + +IIL+
Sbjct: 193 MQGLRRTKAGPFTEKT-LITLHELKDAYVFWKEDGDESELRRVIRPMESAVSHLPKIILR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + +PG+ + + E + + KGE VALA A+MTT + G+
Sbjct: 252 DSAVDAICSGASLAVPGITGLDSNLAEGELTGLFTLKGELVALAKAKMTTEEILKASAGI 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
A RV+M+ TYPR W
Sbjct: 312 AASPIRVLMEAGTYPRGW 329
>gi|452210691|ref|YP_007490805.1| tRNA pseudouridine 55 synthase [Methanosarcina mazei Tuc01]
gi|452100593|gb|AGF97533.1| tRNA pseudouridine 55 synthase [Methanosarcina mazei Tuc01]
Length = 338
Score = 112 bits (281), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR ++G +E+ L+TLH++KDA + + DES LRRVIRP+E + +IIL+
Sbjct: 193 MQGLRRTKAGPFTEKT-LITLHELKDAYVFWKEDGDESELRRVIRPMESAVSHLPKIILR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + +PG+ + + E + + KGE VALA A+MTT + G+
Sbjct: 252 DSAVDAICSGASLAVPGITGLDSNLAEGELTGLFTLKGELVALAKAKMTTEEILKASAGI 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
A RV+M+ TYPR W
Sbjct: 312 AASPIRVLMEAGTYPRGW 329
>gi|73667634|ref|YP_303649.1| H/ACA RNA-protein complex component Cbf5p [Methanosarcina barkeri
str. Fusaro]
gi|121722343|sp|Q46GC3.1|TRUB_METBF RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|72394796|gb|AAZ69069.1| tRNA pseudouridine synthase B [Methanosarcina barkeri str. Fusaro]
Length = 338
Score = 112 bits (280), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G +EE LVTL D+KDA L+ + DES +RRVI P+E + +IIL+
Sbjct: 193 MQELRRTKAGPFTEET-LVTLQDLKDAYVLWKEDGDESEIRRVIMPMETAVSHLPKIILR 251
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + +PG+ + ++ E I + + KGE VALA A+M+T + G+
Sbjct: 252 DSAVDAICSGAALAVPGITSLDANLKKGELIALFTLKGELVALAKAEMSTEELLKASTGL 311
Query: 121 VAKIKRVIMDRDTYPRKW 138
A R++M+ TYP+ W
Sbjct: 312 AATSVRIMMEIGTYPKGW 329
>gi|312137105|ref|YP_004004442.1| tRNA pseudouridine synthase b [Methanothermus fervidus DSM 2088]
gi|311224824|gb|ADP77680.1| tRNA pseudouridine synthase B [Methanothermus fervidus DSM 2088]
Length = 329
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 85/138 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR G E+D LVTLHD+ DA + Y + DESLLR+VI P+E + I+++
Sbjct: 182 MAELRRTMVGPFKEDDTLVTLHDLTDAYHYYIEDGDESLLRKVILPMEKAVEHLPEIVIR 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+G+ + PGV+ D I+ + + I + KGE VA+ A M++ + G+
Sbjct: 242 DTAVDAICHGSYLAAPGVVGLSDNIKRGDIVAIKTLKGELVAVGTATMSSQEILLSSKGI 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
V I +V M+R YP+ W
Sbjct: 302 VVNINKVFMERGIYPQVW 319
>gi|167043025|gb|ABZ07737.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine microorganism HF4000_ANIW141A21]
Length = 338
Score = 112 bits (279), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R ++E GLV LHD+ DA+ + + +ES LRRV+ P+E L K +I++
Sbjct: 185 MIELRRTRVSNLNDEKGLVRLHDLFDAVARFKESGEESGLRRVVSPIEASLTNLKSMIIR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+ A+C GAQ+ +PG+L + + + + S KGE VA+ AQM+ + + + G+
Sbjct: 245 DSAIEAICQGAQLAIPGILGVTGDMAPGDNLALYSQKGEVVAIGKAQMSINDIRDLEKGI 304
Query: 121 VAKIKRVIMDRDTYPRKW 138
RVIM TYP+ W
Sbjct: 305 AFLTDRVIMKAGTYPKMW 322
>gi|363548482|sp|Q975L5.2|TRUB_SULTO RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|109715688|dbj|BAE96921.1| Cbf5 [Sulfolobus tokodaii]
gi|342306177|dbj|BAK54266.1| box H/ACA sRNP component Cbf5 [Sulfolobus tokodaii str. 7]
Length = 337
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E++ LVTL +I +A+Y++ KDES LR+++ P+E G +I++
Sbjct: 198 MRELRRIRSGIFTEKN-LVTLQEISEALYMWKNCKDESDLRKILLPMEYATCGMPKILID 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+ YGA + PG++ Y+ + + + I++ KGE VA+ A + + + G+
Sbjct: 257 DNAVDAISYGAMLTAPGIVAYQR-FRVKDTVAILTLKGELVAIGEADVDSQKLVDMKKGI 315
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K KRV+M RD YPR W
Sbjct: 316 VVKPKRVLMPRDIYPRSW 333
>gi|15920607|ref|NP_376276.1| tRNA pseudouridine synthase B [Sulfolobus tokodaii str. 7]
Length = 237
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 90/138 (65%), Gaps = 2/138 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E++ LVTL +I +A+Y++ KDES LR+++ P+E G +I++
Sbjct: 98 MRELRRIRSGIFTEKN-LVTLQEISEALYMWKNCKDESDLRKILLPMEYATCGMPKILID 156
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+ YGA + PG++ Y+ + + + I++ KGE VA+ A + + + G+
Sbjct: 157 DNAVDAISYGAMLTAPGIVAYQR-FRVKDTVAILTLKGELVAIGEADVDSQKLVDMKKGI 215
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K KRV+M RD YPR W
Sbjct: 216 VVKPKRVLMPRDIYPRSW 233
>gi|375083510|ref|ZP_09730530.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus litoralis
DSM 5473]
gi|374741837|gb|EHR78255.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus litoralis
DSM 5473]
Length = 335
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ DA Y + + E R+ I+P+E + ++ ++
Sbjct: 198 MAELRRTRSGPFKEDETLVTLHDLIDAYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIR 257
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A+M T M T G+
Sbjct: 258 DSAVAAVTHGADLAVPGIVKLHKGIKPGDLVAIMTLKDELVALGKAKMNTQEMLTKTKGI 317
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 318 AVDVEKVFMPRDWYPKMW 335
>gi|352683031|ref|YP_004893555.1| tRNA pseudouridine synthase B [Thermoproteus tenax Kra 1]
gi|350275830|emb|CCC82477.1| tRNA pseudouridine synthase B [Thermoproteus tenax Kra 1]
Length = 338
Score = 110 bits (276), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 89/143 (62%), Gaps = 1/143 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR G +EE+ TL DI DA+Y++ + D+++LR++++P+E + G +I +K
Sbjct: 191 MRELRRVGVGCFTEEEAF-TLQDIADAVYIWRNYGDDTVLRQIVKPIEEIARGVAKIWIK 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+AVC+GA + PGV+++E+ + + + + KGE VAL A M++ + D G+
Sbjct: 250 DGAVDAVCHGAPLAAPGVVKFEEPFQRGDLVAYFTLKGELVALGRALMSSDELKRADKGL 309
Query: 121 VAKIKRVIMDRDTYPRKWGLGPK 143
VA+ RV+M TYP W P
Sbjct: 310 VARTDRVVMRPGTYPSIWRRKPN 332
>gi|256810175|ref|YP_003127544.1| H/ACA RNA-protein complex component Cbf5p [Methanocaldococcus
fervens AG86]
gi|256793375|gb|ACV24044.1| rRNA pseudouridine synthase [Methanocaldococcus fervens AG86]
Length = 328
Score = 110 bits (275), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+D V L D+ DA + + DE LRR+I+P+E L K++++K
Sbjct: 188 MQELRRVKSGCFEEKDA-VYLQDLLDAYIFWKEDGDEEELRRIIKPMEYGLRHLKKVVVK 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E ++I + KGEAV + A M T + D G+
Sbjct: 247 DSAVDAICHGADVYVRGIAKLSKGIGKGEIVLIETLKGEAVGVGKALMNTKEILNSDKGI 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV MDR TYPR W
Sbjct: 307 AVDVERVYMDRGTYPRMW 324
>gi|160331508|ref|XP_001712461.1| cbf5 [Hemiselmis andersenii]
gi|159765909|gb|ABW98136.1| cbf5 [Hemiselmis andersenii]
Length = 382
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 93/144 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
++E+RR R G +EE+ L T HD+ DA +L K R++I PL+ L ++R+++K
Sbjct: 197 LLEIRRIRIGSLTEEESLATFHDLLDAQWLKKHFKKNFFFRKIILPLDVLFSEYRRVLVK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS++N++C+GA + G+L+ E IE+ E+IV+++ +G+ +A+ ++++ + ++ G+
Sbjct: 257 DSSINSICFGAGLTSSGILKIEPNIEIGEKIVLLNFQGDPIAIGVSKINSYSLFNSFSGL 316
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V + K+V + + Y +KW GP S
Sbjct: 317 VVETKKVFIQKGFYRKKWHFGPTS 340
>gi|429964508|gb|ELA46506.1| tRNA pseudouridine synthase B [Vavraia culicis 'floridensis']
Length = 428
Score = 109 bits (273), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 91/131 (69%), Gaps = 1/131 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG EE T+HD+ D ++ +++ DE +RRV+ P+E L +KRI++K
Sbjct: 234 MLELRRIRSGSIREEQCF-TMHDVLDCHHILEKNSDERYIRRVVHPIEYSLRNYKRIMVK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS V+A+C GA++ L GV+R++ I + E++V+++TKGEA+ L ++ + M ++G+
Sbjct: 293 DSCVDALCSGAKLSLNGVIRFDRNINIGEKVVVITTKGEAIVLVETLVSGTEMQINEYGL 352
Query: 121 VAKIKRVIMDR 131
+A+ RVIM++
Sbjct: 353 IARTLRVIMEK 363
>gi|332796420|ref|YP_004457920.1| H/ACA RNA-protein complex component, Cbf5p, C-terminal exon
[Acidianus hospitalis W1]
gi|332694155|gb|AEE93622.1| H/ACA RNA-protein complex component, Cbf5p, C-terminal exon
[Acidianus hospitalis W1]
Length = 221
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E +GLVTL ++ +A+Y++ KDE+ LR+++ P+E L G +IIL
Sbjct: 85 MRELRRIRSGIFTE-NGLVTLQEVSEALYMWKNCKDETDLRKILLPMEIGLCGIPKIILD 143
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AVNA+ YGA PG++ Y++ + + + +++ KGE VA+ A + ++++ G
Sbjct: 144 DNAVNAIAYGATANAPGIVAYQN-FKKGDLVGLITLKGEGVAIGKALVDSNSVQQMKKGE 202
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K R+++ RD YPR W
Sbjct: 203 VIKPNRILIKRDVYPRAW 220
>gi|374633199|ref|ZP_09705566.1| rRNA pseudouridine synthase, putative [Metallosphaera
yellowstonensis MK1]
gi|373524683|gb|EHP69560.1| rRNA pseudouridine synthase, putative [Metallosphaera
yellowstonensis MK1]
Length = 233
Score = 108 bits (270), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 88/138 (63%), Gaps = 4/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D VTLH + +A+YLY + KD++ LR+++ P+E G +II+
Sbjct: 98 MRELRRTRSGVFVERDS-VTLHRLSEALYLYRECKDDTELRKILYPMEVAFCGIPKIIVD 156
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AVN++ YGAQ+M PG++ +++ + + +++ KGE +A+ A + + G
Sbjct: 157 DEAVNSIAYGAQLMAPGIVAHQE-FRRGDTVALITWKGEGIAIGKALTDSDKIGK--KGE 213
Query: 121 VAKIKRVIMDRDTYPRKW 138
VAK RV+MD+D YP+ W
Sbjct: 214 VAKPDRVLMDKDVYPKAW 231
>gi|14591414|ref|NP_143494.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus horikoshii
OT3]
gi|3915184|sp|O59357.1|TRUB_PYRHO RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|3258073|dbj|BAA30756.1| 334aa long hypothetical centromere/microtubule binding protein
[Pyrococcus horikoshii OT3]
Length = 334
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 83/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E LRR I+P+E + +I +K
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEKYLRRAIQPMEKAVEHLPKIWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVAHGANLTVPGIVKLNVGIKRGDLVAIMTLKDELVALGKAMMTSQEMMQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKLW 334
>gi|15678063|ref|NP_275177.1| H/ACA RNA-protein complex component Cbf5p [Methanothermobacter
thermautotrophicus str. Delta H]
gi|3915180|sp|O26140.1|TRUB_METTH RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|2621069|gb|AAB84541.1| centromere/microtubule-binding protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 324
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 85/139 (61%), Gaps = 3/139 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGH-KRIIL 59
M ELRR G +EE GLVTLHD+KDA + + DE+ LR I P+E VGH R+++
Sbjct: 187 MAELRRTAVGPFTEE-GLVTLHDLKDAYQFWVEDGDETFLRECILPME-FAVGHLPRVVI 244
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
DSAV+A+C+GA + G+ +D I + + I++ KGE V + A M+ +A D G
Sbjct: 245 LDSAVDAICHGADLARGGIAGLDDNIAWGDTVAIMTLKGELVGVGEASMSALDIAAADGG 304
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V + ++V M+ TYPR W
Sbjct: 305 LVIETRKVFMEPGTYPRMW 323
>gi|305662620|ref|YP_003858908.1| tRNA pseudouridine synthase B [Ignisphaera aggregans DSM 17230]
gi|304377189|gb|ADM27028.1| tRNA pseudouridine synthase B [Ignisphaera aggregans DSM 17230]
Length = 269
Score = 107 bits (267), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E +VTLH++ +A+Y++ DES LR++I P+E ++ +I++K
Sbjct: 121 MRELRRIGVAHFTENRDIVTLHEVSEALYIWRNLGDESFLRKMILPVEYIVAFLPKIVVK 180
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+ +GAQ+ +PG+ I D+ + I + KGE VA+ A M + M D G+
Sbjct: 181 DSAVDAIAHGAQLAVPGISIVAKNINRDDRVAIFTLKGELVAIGRATMNSEEMVKSDRGI 240
Query: 121 VAKIKRVIMDRDTYPRKW 138
KI+RV M+ + YP W
Sbjct: 241 AVKIERVYMEPNIYPSVW 258
>gi|347524226|ref|YP_004781796.1| rRNA pseudouridine synthase [Pyrolobus fumarii 1A]
gi|343461108|gb|AEM39544.1| rRNA pseudouridine synthase [Pyrolobus fumarii 1A]
Length = 376
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E GLV L D+ +A+Y + Q + LLR+ I P+E + K+++++
Sbjct: 204 MRELRRTKSGPFREAYGLVKLQDLSEALYRWKQEGKDDLLRKYILPMEYAVAHLKKVVIR 263
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+ +GA + +PG+ R I+ + + I + KGE VALA A+M +A G+
Sbjct: 264 DSAVDAIAHGAHLAVPGIARLHADIKKGDVVAIFTLKGELVALAKAEMDAEQIAKAQKGI 323
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ RVIM YPR W
Sbjct: 324 AFRTMRVIMKPGVYPRMW 341
>gi|118575518|ref|YP_875261.1| pseudouridine synthase [Cenarchaeum symbiosum A]
gi|118194039|gb|ABK76957.1| pseudouridine synthase [Cenarchaeum symbiosum A]
Length = 333
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 90/138 (65%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R +E GLVT+H++ +A ++ + D S L+R+IRP+E L G K ++++
Sbjct: 187 MIELRRTRVDHFTEGSGLVTMHELAEAYAVWKE-GDGSRLQRIIRPVEEALAGIKAVVIR 245
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GAQ+ +PG+L+ D + + + + + KGE VALA A+M +A G
Sbjct: 246 DSAVDALCHGAQLAIPGILQVSDNLRIGDLAGVYTQKGEVVALAEAEMEAEVIADATKGH 305
Query: 121 VAKIKRVIMDRDTYPRKW 138
K KR+IM DTYP+ W
Sbjct: 306 AFKTKRLIMKTDTYPKSW 323
>gi|374636750|ref|ZP_09708303.1| rRNA pseudouridine synthase [Methanotorris formicicus Mc-S-70]
gi|373558011|gb|EHP84380.1| rRNA pseudouridine synthase [Methanotorris formicicus Mc-S-70]
Length = 345
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG+ E D V L D+ DA + + + D+ LRR+I+P+E L K++++K
Sbjct: 205 MQELRRVKSGVFEENDA-VYLQDLVDAYHFWKEDGDKEELRRIIKPIEYGLRHLKKVVVK 263
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E +++ + KGEA+ + A M T + D GV
Sbjct: 264 DSAVDAICHGADVYVKGISKLSKGIGKGEVVLVETLKGEAIGVGKALMNTKEILKADEGV 323
Query: 121 VAKIKRVIMDRDTYPRKW 138
++R+ M+ +TYPR W
Sbjct: 324 AVDVERIYMEPNTYPRMW 341
>gi|333911253|ref|YP_004484986.1| tRNA pseudouridine synthase B [Methanotorris igneus Kol 5]
gi|333751842|gb|AEF96921.1| tRNA pseudouridine synthase B [Methanotorris igneus Kol 5]
Length = 338
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG+ E D V L D+ DA + + + DE LRR+I+P+E L K++++K
Sbjct: 198 MQELRRVKSGVFEENDA-VYLQDLVDAYHFWKEDGDEEELRRIIKPIEYGLRHLKKVVVK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E +++ + KGEA+ + A M T + + GV
Sbjct: 257 DSAVDAICHGADVYVKGISKLSKGIGKGEIVLVETLKGEAIGVGKALMNTKEILKANEGV 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
++R+ M+ +TYPR W
Sbjct: 317 AVDVERIYMEPNTYPRMW 334
>gi|315229889|ref|YP_004070325.1| tRNA pseudouridine 55 synthase [Thermococcus barophilus MP]
gi|315182917|gb|ADT83102.1| tRNA pseudouridine 55 synthase [Thermococcus barophilus MP]
Length = 334
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV YGA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTYGADLAVPGIVKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLNKSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKMW 334
>gi|150399736|ref|YP_001323503.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus vannielii
SB]
gi|150012439|gb|ABR54891.1| putative rRNA pseudouridine synthase [Methanococcus vannielii SB]
Length = 359
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG +E + V L D+ DA + + +E LR++++PLE L K++++K
Sbjct: 183 MQELRRTISGPFNENEA-VYLQDLLDAYIFWKEDGNEEELRKLVKPLEYGLQYLKKVVIK 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GAQ+ G+ + E GI DE ++I + KGEAVA+ M T M + V
Sbjct: 242 DSAVDAVCHGAQLYASGISKIEKGIGTDELVLIETLKGEAVAVGKPLMNTKDMLKAEEDV 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
V I+RVIM+ YPR W
Sbjct: 302 VVDIERVIMETGIYPRMW 319
>gi|296109351|ref|YP_003616300.1| rRNA pseudouridine synthase [methanocaldococcus infernus ME]
gi|295434165|gb|ADG13336.1| rRNA pseudouridine synthase [Methanocaldococcus infernus ME]
Length = 320
Score = 106 bits (264), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG EE V L D+ DA + + KDE LR++I+P+E L K+I++K
Sbjct: 180 MQELRRTKSG-NFEEKDCVYLQDLLDAYIFWKEDKDEEELRKIIKPMEKGLEHLKKIVVK 238
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + I + +V+ + KGEA+ + A M+T + D G
Sbjct: 239 DSAVDAICHGANVYVKGISKLSKDINRGDLVVVETLKGEAIGIGKALMSTKEILEKDKGE 298
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV M+R TYPR W
Sbjct: 299 AVDMERVFMERGTYPRMW 316
>gi|14520738|ref|NP_126213.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus abyssi GE5]
gi|13959604|sp|Q9V1A5.1|TRUB_PYRAB RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|112490021|pdb|2AUS|C Chain C, Crystal Structure Of The Archaeal Box HACA SRNP NOP10-Cbf5
Complex
gi|112490023|pdb|2AUS|A Chain A, Crystal Structure Of The Archaeal Box HACA SRNP NOP10-Cbf5
Complex
gi|5457954|emb|CAB49444.1| truB tRNA pseudouridine synthase II [Pyrococcus abyssi GE5]
gi|380741277|tpe|CCE69911.1| TPA: H/ACA RNA-protein complex component Cbf5p [Pyrococcus abyssi
GE5]
Length = 334
Score = 105 bits (263), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E +R+ I+P+E + +I +K
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYIRKAIQPMEKAVEHLPKIWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A M+T M G+
Sbjct: 257 DSAVAAVAHGANLTVPGIVKLNAGIKKGDLVAIMTLKDELVALGKAMMSTQEMIERSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKLW 334
>gi|409096152|ref|ZP_11216176.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus zilligii
AN1]
Length = 334
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E LRR I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYLRRAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AV +GA + +PG+++ +GI+ + + I++ K E VA+ A MT+ M G+
Sbjct: 257 DSAVSAVTHGADLAVPGIVKLNEGIKKGDLVAIMTLKDELVAIGKATMTSGEMLQGSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M R+ YP+ W
Sbjct: 317 AVDVDKVFMPREWYPKMW 334
>gi|223477864|ref|YP_002582357.1| tRNA pseudouridine 55 synthase [Thermococcus sp. AM4]
gi|214033090|gb|EEB73918.1| tRNA pseudouridine 55 synthase [Thermococcus sp. AM4]
Length = 334
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+VI+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKVIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIVKLHKGIKKGDLVAIMTLKDELVALGKATMTSGEMLQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YP+ W
Sbjct: 317 AVDVDKVFMPRDWYPKMW 334
>gi|57641444|ref|YP_183922.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus
kodakarensis KOD1]
gi|62901179|sp|Q5JJE8.1|TRUB_PYRKO RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|57159768|dbj|BAD85698.1| tRNA pseudouridine synthase B [Thermococcus kodakarensis KOD1]
Length = 338
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGVEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PGV++ GI+ + + I++ K E VAL A MTT M G+
Sbjct: 257 DSAVAAVTHGADLAVPGVVKLHKGIKKGDLVAIMTLKDELVALGKAMMTTGEMLQKSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YP+ W
Sbjct: 317 AVDVDKVFMPRDWYPKLW 334
>gi|146302842|ref|YP_001190158.1| PUA domain-containing protein [Metallosphaera sedula DSM 5348]
gi|145701092|gb|ABP94234.1| tRNA pseudouridine synthase B [Metallosphaera sedula DSM 5348]
Length = 233
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 87/138 (63%), Gaps = 4/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E D +VTL + +A+YLY +E LRR++ P+E G +II+
Sbjct: 98 MRELRRTRSGIFTE-DTVVTLQQVSEALYLYRNCGEEDELRRILIPMEMAFCGIPKIIVD 156
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D VN++ YG+ +M PG++ ++ G + + + +++ KGE +AL A + + +M G
Sbjct: 157 DETVNSLAYGSPLMAPGIVAFQ-GFKKGDTVALITWKGEGIALGKALVDSVSMG--KRGE 213
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K +RV+MD+D YP+ W
Sbjct: 214 VVKPERVLMDKDVYPKAW 231
>gi|332157871|ref|YP_004423150.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus sp. NA2]
gi|331033334|gb|AEC51146.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus sp. NA2]
Length = 339
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E LR+ I+P+E + +I +K
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYLRKAIQPMEKAVEHLPKIWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGANLTVPGIAKLHAGIKRGDLVAIMTLKEELVALGKALMTSQEMLQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKLW 334
>gi|408402829|ref|YP_006860812.1| tRNA pseudouridine synthase B [Candidatus Nitrososphaera gargensis
Ga9.2]
gi|408363425|gb|AFU57155.1| tRNA pseudouridine synthase B [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 355
Score = 105 bits (261), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 84/140 (60%), Gaps = 2/140 (1%)
Query: 1 MIELRRNRSGIQSEED--GLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRII 58
M+ELRR R SE++ GLV LHD+ DA Y + KD+ LRR+I P+E L G + +
Sbjct: 187 MVELRRTRVSNLSEQNSGGLVKLHDLADAYQRYKESKDDEKLRRLILPIEHCLEGIRAVT 246
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
++D+AV+A+C+GA + +PGV+ + + E + + + KGE V L A MT +
Sbjct: 247 VRDTAVDALCHGAPLAVPGVVAVPKDLRVGELVGVYTLKGEVVGLGQAAMTKEEIEQNAR 306
Query: 119 GVVAKIKRVIMDRDTYPRKW 138
G+ +KR+IM TYP+ W
Sbjct: 307 GIAFAMKRLIMKPGTYPKAW 326
>gi|240104029|ref|YP_002960338.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus
gammatolerans EJ3]
gi|259550546|sp|C5A255.1|TRUB_THEGJ RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|239911583|gb|ACS34474.1| Centromere binding protein CBF5/pseudouridine synthase truB-like
protein (truB) [Thermococcus gammatolerans EJ3]
Length = 334
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIVKLHKGIKKGDLVAIMTLKDELVALGKAMMTSGEMLQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YPR W
Sbjct: 317 AVDVDKVFMPRDWYPRMW 334
>gi|218884458|ref|YP_002428840.1| H/ACA RNA-protein complex component Cbf5p [Desulfurococcus
kamchatkensis 1221n]
gi|218766074|gb|ACL11473.1| tRNA pseudouridine synthase [Desulfurococcus kamchatkensis 1221n]
Length = 345
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 84/141 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV L DI +A+ L+ DE +RR+I P+E + +I++
Sbjct: 202 MRELRRTRTGPYREDETLVRLQDISEALALWRSSGDERYIRRIILPVETSIAHLPKIMIL 261
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+ +GA + +PG+ R +E ++ + I++ KGE VAL A + +A GV
Sbjct: 262 DTAVDAIAHGANLAVPGIARLTSNVERNKTVAILTLKGELVALGTALYSAKEIAGMKKGV 321
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
VA+ +RV+M YP W G
Sbjct: 322 VARTRRVVMPTGIYPPAWRKG 342
>gi|315583491|pdb|3MQK|A Chain A, Cbf5-Nop10-Gar1 Complex Binding With 17mer Rna Containing
Aca Trinucleotide
Length = 328
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 190 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 250 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 310 AVDVEKVFMPRDWYPKLW 327
>gi|330040650|ref|XP_003239983.1| pseudouridylate synthase [Cryptomonas paramecium]
gi|327206909|gb|AEA39085.1| pseudouridylate synthase [Cryptomonas paramecium]
Length = 358
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 3 ELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDS 62
E R+ SG SE L HD+ D+ +LY K + ++++ P+E V +R+++K S
Sbjct: 200 ESRQIYSGYLSENQNLTNFHDLIDSEWLYSSKKIDFYIKKITMPMEVAAVSFRRVVIKFS 259
Query: 63 AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVA 122
+VN++CYGA + G++R ED I+ ++EI+I++ KGE VAL + T +
Sbjct: 260 SVNSICYGAALKTRGIIRTEDVIKKNQEIIIITLKGELVALGIYIHGVKFSET---KIYF 316
Query: 123 KIKRVIMDRDTYPRKWGLG 141
K+K+ IM ++TYP+ W +G
Sbjct: 317 KVKKTIMRKNTYPKLWKMG 335
>gi|241913454|pdb|3HJW|A Chain A, Structure Of A Functional Ribonucleoprotein Pseudouridine
Synthase Bound To A Substrate Rna
gi|241913459|pdb|3HJY|A Chain A, Structure Of A Functional Ribonucleoprotein Pseudouridine
Synthase Bound To A Substrate Rna
Length = 327
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 190 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 250 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 310 AVDVEKVFMPRDWYPKLW 327
>gi|167013309|pdb|2RFK|A Chain A, Substrate Rna Positioning In The Archaeal HACA
Ribonucleoprotein Complex
Length = 334
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 193 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 252
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 253 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 312
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 313 AVDVEKVFMPRDWYPKLW 330
>gi|18978157|ref|NP_579514.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus furiosus DSM
3638]
gi|397652567|ref|YP_006493148.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus furiosus
COM1]
gi|62901346|sp|Q7LWY0.1|TRUB_PYRFU RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|300508488|pdb|3LWO|A Chain A, Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING
5BRU
gi|300508493|pdb|3LWP|A Chain A, Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING
5BRDU
gi|300508498|pdb|3LWQ|A Chain A, Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING
3MU
gi|300508503|pdb|3LWR|A Chain A, Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING
4SU
gi|300508508|pdb|3LWV|A Chain A, Structure Of HACA RNP BOUND TO A SUBSTRATE RNA CONTAINING
2'- Deoxyuridine
gi|18893962|gb|AAL81909.1| centromere binding protein homolog/pseudouridine synthase
[Pyrococcus furiosus DSM 3638]
gi|393190158|gb|AFN04856.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus furiosus
COM1]
Length = 340
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 197 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKLW 334
>gi|116667872|pdb|2HVY|A Chain A, Crystal Structure Of An HACA BOX RNP FROM PYROCOCCUS
FURIOSUS
gi|241913415|pdb|3HAX|A Chain A, Crystal Structure Of A Substrate-Bound Gar1-Minus HACA RNP
FROM Pyrococcus Furiosus
gi|241913420|pdb|3HAY|A Chain A, Crystal Structure Of A Substrate-Bound Full HACA RNP FROM
Pyrococcus Furiosus
Length = 346
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 197 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKLW 334
>gi|156937715|ref|YP_001435511.1| rRNA pseudouridine synthase [Ignicoccus hospitalis KIN4/I]
gi|156566699|gb|ABU82104.1| putative rRNA pseudouridine synthase [Ignicoccus hospitalis KIN4/I]
Length = 349
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 83/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+ LV + D+ +A +LYD + D+SLL++ I P E +I++K
Sbjct: 201 MRELRRTRSGPFHEDWNLVRMQDLSEAKFLYDNYGDDSLLKKYIMPCEVATCHMPKIMIK 260
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+AV +GA + + GV D ++ + + +VS KGE VA+A A +++ + G
Sbjct: 261 DGAVDAVAHGANVSIRGVAALTDNMKKGDVVAVVSLKGELVAIAQALVSSQEALKMEKGW 320
Query: 121 VAKIKRVIMDRDTYPRKW 138
VAK KRVIM TYP W
Sbjct: 321 VAKTKRVIMKPGTYPDVW 338
>gi|126465945|ref|YP_001041054.1| tRNA pseudouridine synthase B [Staphylothermus marinus F1]
gi|126014768|gb|ABN70146.1| tRNA pseudouridine synthase B [Staphylothermus marinus F1]
Length = 256
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV + ++ +A+YL+ DE LR++I P+E + +II++
Sbjct: 113 MRELRRTRTGPYKEDETLVRMQEVSEALYLWRNKGDERYLRKIILPVETAIAHLPKIIIR 172
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+AV +GA + +PG++R + +++ + I++ KGE VAL A + +A G+
Sbjct: 173 DTAVDAVAHGAHLAVPGIVRLTKDVALNKTVAILTLKGELVALGTALKSAVEIANMKKGI 232
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + KRV M YP W
Sbjct: 233 VVRTKRVYMKPGIYPAVW 250
>gi|389852948|ref|YP_006355182.1| H/ACA RNA-protein complex component Cbf5p [Pyrococcus sp. ST04]
gi|388250254|gb|AFK23107.1| putative H/ACA RNA-protein complex component Cbf5p [Pyrococcus sp.
ST04]
Length = 334
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ +K
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIVKLHAGIKRGDLVAIMTLKDELVALGKAIMTSQEMLQKSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 317 AVDVEKVFMPRDWYPKMW 334
>gi|327401041|ref|YP_004341880.1| tRNA pseudouridine synthase B [Archaeoglobus veneficus SNP6]
gi|327316549|gb|AEA47165.1| tRNA pseudouridine synthase B [Archaeoglobus veneficus SNP6]
Length = 339
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G+ +E TLHD+ DA + + +E LR +I+P+E + +I++K
Sbjct: 194 MQELRRTRTGV-FDESMTYTLHDLLDAYVFWKEEGEERYLREIIKPMELAVANVPKIVIK 252
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA +M GV+ E ++ D ++ I + K E VAL A M M G
Sbjct: 253 DSAVDAICHGADLMAKGVVYVEKTVKKDADVAIFTLKHELVALGKALMDAEDMLNVRSGP 312
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RVIM+R TYP W
Sbjct: 313 VVDVTRVIMERGTYPAMW 330
>gi|337283743|ref|YP_004623217.1| rRNA pseudouridine synthase [Pyrococcus yayanosii CH1]
gi|334899677|gb|AEH23945.1| rRNA pseudouridine synthase, putative [Pyrococcus yayanosii CH1]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVT HD+ D + + + E RR I+P+E + ++ +K
Sbjct: 196 MAELRRTRSGPFKEDETLVTFHDLVDYYHFWKEDGIEEHFRRAIQPMEKAVEHLPKVWIK 255
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 256 DSAVAAVTHGADLAVPGIVKLHAGIKRGDLVAIMTLKDELVALGKALMTSQEMLQKSRGI 315
Query: 121 VAKIKRVIMDRDTYPRKW 138
+++V M RD YP+ W
Sbjct: 316 AVDVEKVFMPRDWYPKMW 333
>gi|150402885|ref|YP_001330179.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis C7]
gi|189036540|sp|A6VHV2.1|TRUB_METM7 RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|150033915|gb|ABR66028.1| putative rRNA pseudouridine synthase [Methanococcus maripaludis C7]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG E + V L D+ DA + + +E LR++++PLE L K+II+K
Sbjct: 181 MQELRRTISGPFYENEA-VYLQDLLDAYIFWKEDGNEEELRKLVKPLEYGLQHLKKIIVK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + GV + E GI DE ++I + KGEAVA+ M T M + G
Sbjct: 240 DSAVDAVCHGATLYSSGVSKIEKGIGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGE 299
Query: 121 VAKIKRVIMDRDTYPRKW 138
V +I RVIM+ YPR W
Sbjct: 300 VVEITRVIMEPGIYPRIW 317
>gi|134046746|ref|YP_001098231.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis C5]
gi|189036539|sp|A4G0N3.1|TRUB_METM5 RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|132664371|gb|ABO36017.1| tRNA pseudouridine synthase B [Methanococcus maripaludis C5]
Length = 333
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG E + V L D+ DA + + +E LR++++PLE L K+II+K
Sbjct: 181 MQELRRTISGPFYENEA-VYLQDLLDAYIFWKEDGNEEELRKLVKPLEYGLQHLKKIIVK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + GV + E GI DE ++I + KGEAVA+ M T M + G
Sbjct: 240 DSAVDAVCHGATLYSSGVSKIEKGIGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGE 299
Query: 121 VAKIKRVIMDRDTYPRKW 138
V +I RVIM+ YPR W
Sbjct: 300 VVEITRVIMEPGIYPRIW 317
>gi|307595999|ref|YP_003902316.1| rRNA pseudouridine synthase [Vulcanisaeta distributa DSM 14429]
gi|307551200|gb|ADN51265.1| rRNA pseudouridine synthase [Vulcanisaeta distributa DSM 14429]
Length = 351
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G +E++ VTL D+KDA LY + E LLR ++P+E ++ ++ ++
Sbjct: 194 MRELRRTRVGCFTEKEA-VTLQDLKDAYTLYKDYGVEDLLRTYVKPVEYMVRHLPKVWIR 252
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + +PG+++ + I + I++ K E VAL A+MT+ + G+
Sbjct: 253 DSAVDAICHGAALAVPGIVKLTNNIGKGSLVAIMTLKNELVALGYAEMTSDEIMKAQRGI 312
Query: 121 VAKIKRVIMDRDTYPRKW 138
K RV+M + TYP W
Sbjct: 313 AVKTTRVVMKKGTYPPMW 330
>gi|284162947|ref|YP_003401570.1| rRNA pseudouridine synthase [Archaeoglobus profundus DSM 5631]
gi|284012944|gb|ADB58897.1| rRNA pseudouridine synthase [Archaeoglobus profundus DSM 5631]
Length = 333
Score = 104 bits (259), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+GI +E D TL D+ DA + + +E LR++I+P+E + ++I+K
Sbjct: 195 MQELRRTRTGIFTE-DLCYTLQDLLDAYVFWKEEGEEKYLRQIIKPMELAVTDIPKVIIK 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GA + GV E ++ + I + KGE VAL +A M + + GV
Sbjct: 254 DTAVDAICHGADLTARGVCYIERTVKKGRRVAIFTLKGELVALGVATMDAEEILRTNRGV 313
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + RVIM+R YPR W
Sbjct: 314 VVDVTRVIMERGVYPRAW 331
>gi|340624999|ref|YP_004743452.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis X1]
gi|339905267|gb|AEK20709.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis X1]
Length = 333
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG E++ V L D+ DA + + +E LR++++PLE L K+II+K
Sbjct: 181 MQELRRTISGPFYEKEA-VYLQDLLDAYIFWKEDGNEEELRKIVKPLEYGLQHLKKIIIK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + G+ + E G+ DE ++I + KGEAVA+ M T M + G
Sbjct: 240 DSAVDAVCHGATLYSSGISKIEKGLGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGE 299
Query: 121 VAKIKRVIMDRDTYPRKW 138
V +I RVIM+ YPR W
Sbjct: 300 VVEITRVIMEPGIYPRIW 317
>gi|341582033|ref|YP_004762525.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus sp. 4557]
gi|340809691|gb|AEK72848.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus sp. 4557]
Length = 334
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 80/138 (57%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLIDYYHFWKDDGIEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV YGA + +PG+++ GI+ + + +++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTYGADLAVPGIVKLNKGIKRGDLVAVMTLKDELVALGKATMTSGEMLQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YP+ W
Sbjct: 317 AVDVDKVFMPRDWYPKLW 334
>gi|298674775|ref|YP_003726525.1| rRNA pseudouridine synthase [Methanohalobium evestigatum Z-7303]
gi|298287763|gb|ADI73729.1| rRNA pseudouridine synthase [Methanohalobium evestigatum Z-7303]
Length = 340
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 82/141 (58%), Gaps = 1/141 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M EL+R ++G E D + TLHD+KDA + ++ ES LR+ ++P+E L I+++
Sbjct: 199 MQELKRTKTGPFCE-DNMTTLHDLKDAYVFWKEYGTESELRKFVQPVELALTHLPSIVIR 257
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + +PG++ I + + + KGE VAL A M + ++G+
Sbjct: 258 DSAVDAICRGASLAIPGIVSLNANIFNGNTVCLFTQKGEIVALCKASMDADEILETENGL 317
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
A + VIM+ TYP+ W G
Sbjct: 318 AAITENVIMNAGTYPKAWNSG 338
>gi|45359249|ref|NP_988806.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis S2]
gi|62901318|sp|Q6LWM3.1|TRUB_METMP RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|45048124|emb|CAF31242.1| pseudouridine syntase related protein [Methanococcus maripaludis
S2]
Length = 333
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG E + V L D+ DA + + +E LR++++PLE L K+II+K
Sbjct: 181 MQELRRTISGPFYENEA-VYLQDLLDAYIFWKEDGNEEELRKIVKPLEYGLQHLKKIIIK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + G+ + E G+ DE ++I + KGEAVA+ M T M + G
Sbjct: 240 DSAVDAVCHGATLYSSGISKIEKGLGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGE 299
Query: 121 VAKIKRVIMDRDTYPRKW 138
V +I RVIM+ YPR W
Sbjct: 300 VVEITRVIMEPGIYPRIW 317
>gi|410721689|ref|ZP_11361019.1| rRNA pseudouridine synthase, putative [Methanobacterium sp.
Maddingley MBC34]
gi|410598435|gb|EKQ53008.1| rRNA pseudouridine synthase, putative [Methanobacterium sp.
Maddingley MBC34]
Length = 338
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R E++ L TL D+ DA + + + DE+ LR + P+E K+++++
Sbjct: 200 MAELRRTRVADFKEDETLKTLQDVTDAYHYWREDDDEAPLRECVLPMERAASHLKKVVVR 259
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + G+L+ +GI+ +E + +++ KGE VA A TT+ + D G+
Sbjct: 260 DSAVDALCHGADLAAGGILKLSEGIKRNETLAVLTLKGELVAAGEALATTNEIDQADKGI 319
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ IK+V M+ TYP W
Sbjct: 320 MVNIKKVFMEPGTYPMMW 337
>gi|390960764|ref|YP_006424598.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus sp. CL1]
gi|390519072|gb|AFL94804.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus sp. CL1]
Length = 334
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + +++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIVKVHKGIKKGDLVAVMTLKDELVALGKATMTSGEMLQRSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YP+ W
Sbjct: 317 AVDVDKVFMPRDWYPKMW 334
>gi|212223242|ref|YP_002306478.1| H/ACA RNA-protein complex component Cbf5p [Thermococcus onnurineus
NA1]
gi|226708676|sp|B6YSP4.1|TRUB_THEON RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|212008199|gb|ACJ15581.1| tRNA pseudouridine synthase B [Thermococcus onnurineus NA1]
Length = 334
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ LVTLHD+ D + + + E R+ I+P+E + ++ ++
Sbjct: 197 MAELRRTRSGPFKEDETLVTLHDLVDYYHFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIR 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+++ GI+ + + +++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIVKVHKGIKKGDLVAVMTLKDELVALGKATMTSGEMLQKSKGI 316
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M RD YP+ W
Sbjct: 317 AVDVDKVFMPRDWYPKLW 334
>gi|167044960|gb|ABZ09625.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine crenarchaeote HF4000_APKG8G2]
gi|167045438|gb|ABZ10093.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine crenarchaeote HF4000_APKG10F15]
Length = 337
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E LVTLH I A + +KD+S L +I P+E +L K ++++
Sbjct: 187 MIELRRTRVSQFHENYPLVTLHQIAVAFADWKDNKDDSKLSTMIHPIEHVLSEIKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GAQ+ +PG+L+ ++ ++ + I + KGE VALA + M+ + G
Sbjct: 247 DTAVDALCHGAQLAIPGILQISPNLQKEDLVGIYTQKGEIVALAQSLMSEDDIKENTKGY 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ KR+IM +TYP+ W
Sbjct: 307 AFETKRIIMAPETYPKSW 324
>gi|159905370|ref|YP_001549032.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus
maripaludis C6]
gi|226708670|sp|A9A8X7.1|TRUB_METM6 RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|159886863|gb|ABX01800.1| rRNA pseudouridine synthase [Methanococcus maripaludis C6]
Length = 333
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/138 (44%), Positives = 83/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG E + V L D+ DA + + +E LR++++PLE L K+II+K
Sbjct: 181 MQELRRTISGPFYENEA-VYLQDLLDAYISWKEDGNEEELRKLVKPLEYGLQHLKKIIVK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + GV + E GI DE ++I + KGEAVA+ M T M + G
Sbjct: 240 DSAVDAVCHGATLYSSGVSKIEKGIGTDEVVLIETLKGEAVAVGKPLMNTKDMLKTEEGE 299
Query: 121 VAKIKRVIMDRDTYPRKW 138
V +I RVIM+ YPR W
Sbjct: 300 VVEITRVIMEPGIYPRIW 317
>gi|170291189|ref|YP_001738005.1| pseudouridylate synthase [Candidatus Korarchaeum cryptofilum OPF8]
gi|226708669|sp|B1L793.1|TRUB_KORCO RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|170175269|gb|ACB08322.1| Pseudouridylate synthase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 325
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR RSGI +E+D VTL DIKDA + + DES +R+VI PLE + +I +K
Sbjct: 186 MRDLRRIRSGIFTEKD-CVTLEDIKDAYDSWRESGDESKIRKVILPLEEAVRHLPKIYVK 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV ++ +GA + + G+ GI+ + +++ KGE +A+ A M M + D GV
Sbjct: 245 DSAVASLTHGASLKVKGICSLSRGIKKGSIVALMTLKGELIAIGRALMDFDEMLSADSGV 304
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
A I+RVIM RD YP W G
Sbjct: 305 AASIERVIMPRDLYPPMWKTG 325
>gi|325967846|ref|YP_004244038.1| rRNA pseudouridine synthase [Vulcanisaeta moutnovskia 768-28]
gi|323707049|gb|ADY00536.1| rRNA pseudouridine synthase [Vulcanisaeta moutnovskia 768-28]
Length = 348
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 84/138 (60%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G +E++ +TL D+KDA LY + E LLR ++P+E ++ ++ ++
Sbjct: 191 MRELRRIRVGCFTEKE-TITLQDLKDAYTLYRDYGIEDLLRTYVKPVEYMVRHLPKVWIR 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + +PG+++ + I+ I++ K E VAL A+MT+ + G+
Sbjct: 250 DSAVDAVCHGAALAVPGIVKLTNNIKRKSLTAIMTLKNELVALGYAEMTSDEIMNAQRGI 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
K RVIM + TYP W
Sbjct: 310 AIKTTRVIMKKGTYPSMW 327
>gi|330833923|ref|YP_004408651.1| pseudouridine synthase subunit B [Metallosphaera cuprina Ar-4]
gi|329566062|gb|AEB94167.1| pseudouridine synthase (b subunit) [Metallosphaera cuprina Ar-4]
Length = 219
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 86/138 (62%), Gaps = 4/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +ED LVTL + +A+YLY +E LR+++ P+E G +II+
Sbjct: 84 MRELRRVRSGI-FKEDTLVTLQQVSEALYLYRNCGEEEELRKILMPMEIAFCGVPKIIVD 142
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D VN++ YG+ +M PG++ Y+D + + + +++ KGE +A+ A + + + G
Sbjct: 143 DETVNSISYGSPLMAPGIIAYQD-FKKGDYVGLITWKGEGIAIGKAVIDSKQLGK--KGE 199
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K +RV+MD+D YP+ W
Sbjct: 200 VVKTERVLMDKDIYPKAW 217
>gi|282164918|ref|YP_003357303.1| probable tRNA pseudouridine synthase B [Methanocella paludicola
SANAE]
gi|282157232|dbj|BAI62320.1| probable tRNA pseudouridine synthase B [Methanocella paludicola
SANAE]
Length = 332
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E++ L+TL D+ DA Y Y DE+ LR++I P+E L RI++K
Sbjct: 191 MYELRRTKSGPFKEDETLITLQDLTDA-YFYFTQGDEAPLRKIILPMENALRNMPRIVVK 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+ GA + + G+ + + GI+ + + + + GE V++ A+MTT + G
Sbjct: 250 DSAVDALAEGAPLYVQGICKVDTGIQKGDMVAVFTLIGEVVSMGTAKMTTEELMASKEGQ 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
RV+M+ YP++W
Sbjct: 310 AMDTVRVVMEPGIYPKEW 327
>gi|261403018|ref|YP_003247242.1| H/ACA RNA-protein complex component Cbf5p [Methanocaldococcus
vulcanius M7]
gi|261370011|gb|ACX72760.1| rRNA pseudouridine synthase [Methanocaldococcus vulcanius M7]
Length = 332
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 82/138 (59%), Gaps = 2/138 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+D L D+ DA + + DE + R++I+P+E L K++++K
Sbjct: 192 MQELRRVKSGCFEEKD-TTYLQDLLDAYIFWKEDGDEEI-RKIIKPMEYGLKHLKKVVVK 249
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + G+ + GI E ++I + KGEAV A M M + GV
Sbjct: 250 DSAVDAICHGADVYVRGISKVSKGIGKGEPVLIETLKGEAVGFGSALMNYKDMLNAEKGV 309
Query: 121 VAKIKRVIMDRDTYPRKW 138
++RV MDR TYP+ W
Sbjct: 310 AVNVERVFMDRGTYPKMW 327
>gi|167044171|gb|ABZ08853.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine crenarchaeote HF4000_APKG5E24]
gi|167044487|gb|ABZ09162.1| putative TruB family pseudouridylate synthase (N terminal domain)
[uncultured marine crenarchaeote HF4000_APKG6J21]
Length = 337
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 83/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR R E LVTLH I A + KD+S L +I P+E +L K ++++
Sbjct: 187 MIELRRTRVSQFHENYPLVTLHQIAVAFADWKDSKDDSKLSTMIHPIEHVLSEIKSVVIR 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GAQ+ +PG+L+ ++ ++ + I + KGE VALA + M+ + G
Sbjct: 247 DTAVDALCHGAQLAIPGILQISPNLQKEDLVGIYTQKGEIVALAQSLMSEDDIKENTKGY 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ KR+IM +TYP+ W
Sbjct: 307 AFETKRIIMAPETYPKSW 324
>gi|84489672|ref|YP_447904.1| H/ACA RNA-protein complex component Cbf5p [Methanosphaera
stadtmanae DSM 3091]
gi|84372991|gb|ABC57261.1| TruB [Methanosphaera stadtmanae DSM 3091]
Length = 321
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 85/138 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +G E+D L TL D+ DA Y Y + DE+LLR++I+P+E K+I +K
Sbjct: 183 MAELRRTMAGSFLEDDTLTTLQDVTDAYYFYKEDGDETLLRKLIQPMEHTTKYVKKIYVK 242
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+++C+GA + GV++ ++ I + + +++ K E +A+ +T+ + D +
Sbjct: 243 DTAVDSICHGANLASSGVVKLDNQIHENNTVAVMTLKEELLAIGTCMYSTNDIINSDTKI 302
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ I++V + +TYP+ W
Sbjct: 303 IVDIQKVFILPNTYPKMW 320
>gi|297619799|ref|YP_003707904.1| rRNA pseudouridine synthase [Methanococcus voltae A3]
gi|297378776|gb|ADI36931.1| rRNA pseudouridine synthase [Methanococcus voltae A3]
Length = 336
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 85/138 (61%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG EE+ + L D+ D + + + +E +R +I+P+E L +++I+K
Sbjct: 192 MQELRRVKSGPFFEEEA-IYLQDLVDEYFYWKETGNEEYIREIIKPVEYGLQHLQKVIIK 250
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+C+GA + G+ + E GI +E +++ + KGEAVA+ T + D +
Sbjct: 251 DSAVNAICHGANLYANGISKIEKGIGPEEIVLVETLKGEAVAIGKTLANTKKILKSDEEL 310
Query: 121 VAKIKRVIMDRDTYPRKW 138
V I+RVIMD++ YP+ W
Sbjct: 311 VIDIERVIMDKNIYPKMW 328
>gi|88192797|pdb|2EY4|A Chain A, Crystal Structure Of A Cbf5-Nop10-Gar1 Complex
gi|88192798|pdb|2EY4|B Chain B, Crystal Structure Of A Cbf5-Nop10-Gar1 Complex
Length = 333
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 80/136 (58%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E++ L+TLHD+ D Y + + E R+ I+P+E + ++ +K
Sbjct: 197 MSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIK 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV AV +GA + +PG+ + GI+ + + I++ K E VAL A MT+ M G+
Sbjct: 257 DSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGKAMMTSQEMLEKTKGI 316
Query: 121 VAKIKRVIMDRDTYPR 136
+++V M RD YP+
Sbjct: 317 AVDVEKVFMPRDWYPK 332
>gi|304314283|ref|YP_003849430.1| pseudouridine synthase B [Methanothermobacter marburgensis str.
Marburg]
gi|302587742|gb|ADL58117.1| predicted pseudouridine synthase B [Methanothermobacter
marburgensis str. Marburg]
Length = 322
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 80/138 (57%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G +EE GLVTLHD+KDA + + DE LR P+E + R ++
Sbjct: 182 MAELRRTRVGPFTEE-GLVTLHDLKDAYQFWVEDGDERFLRECTLPMEFAVSHLPRAVIL 240
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + G+ +D I+ + + +++ KGE VA+ A M + + D G+
Sbjct: 241 DSAVDAVCHGADLARGGIAGLDDNIKKGDTVAVMTLKGELVAVGEALMPSLDIVAADSGL 300
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + +V M TYPR W
Sbjct: 301 VIETDKVFMKPGTYPRMW 318
>gi|336121792|ref|YP_004576567.1| tRNA pseudouridine synthase B [Methanothermococcus okinawensis IH1]
gi|334856313|gb|AEH06789.1| tRNA pseudouridine synthase B [Methanothermococcus okinawensis IH1]
Length = 329
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 86/140 (61%), Gaps = 3/140 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG EE+ V L D+ DA + + +E LR++++P+E L K+I++K
Sbjct: 181 MQELRRTKSGPFGEEEA-VYLQDLTDAYVFWKEEGNEEELRKIVKPMEYGLRHLKKIVIK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTM--ATCDH 118
DSAV+A+C+GA + L G+ + GI +DE ++I + KGEAVA+ A ++T + T
Sbjct: 240 DSAVDAICHGADVYLNGIAKLSKGIGIDEIVLIETLKGEAVAIGKALLSTKNILKETEYT 299
Query: 119 GVVAKIKRVIMDRDTYPRKW 138
+ +RV+M TYPR W
Sbjct: 300 NPIVDTERVLMKPGTYPRMW 319
>gi|383319781|ref|YP_005380622.1| tRNA pseudouridine synthase B [Methanocella conradii HZ254]
gi|379321151|gb|AFD00104.1| tRNA pseudouridine synthase B [Methanocella conradii HZ254]
Length = 329
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E++ L+TLHD+ DA Y Y Q DE+ LR++I P+E L RII+K
Sbjct: 188 MYELRRTKSGPFKEDETLITLHDLTDAYYYYTQ-GDEAPLRKIILPMEYALRNMPRIIVK 246
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV A+ GA + + GV + + GI + + + + GE V++ A+M+T + G
Sbjct: 247 DSAVGALAEGAPLFVQGVCKVDTGIRQGDTVAVFTHMGEVVSIGTARMSTEELMAAKEGQ 306
Query: 121 VAKIKRVIMDRDTYPRKW 138
V+M YP +W
Sbjct: 307 ALDTLCVMMKPGVYPPEW 324
>gi|333987649|ref|YP_004520256.1| tRNA pseudouridine synthase B [Methanobacterium sp. SWAN-1]
gi|333825793|gb|AEG18455.1| tRNA pseudouridine synthase B [Methanobacterium sp. SWAN-1]
Length = 320
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG +++ + TLHDI DA + + DES LR I P+E + +II++
Sbjct: 182 MAELRRTISGPFHDDETIKTLHDITDAYHAWVDDGDESQLRDCILPMESAVSHLPKIIIR 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + G+L I+ + I++ KGE VA + T + D G+
Sbjct: 242 DSAVDAICHGADLAAGGILSLSQDIDKKSTVAILTLKGELVAAGESVETAGVIHKSDKGI 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ K K+V M +TYP+ W
Sbjct: 302 MVKTKKVFMQPETYPKMW 319
>gi|222445023|ref|ZP_03607538.1| hypothetical protein METSMIALI_00640 [Methanobrevibacter smithii
DSM 2375]
gi|261350408|ref|ZP_05975825.1| putative rRNA pseudouridine synthase [Methanobrevibacter smithii
DSM 2374]
gi|222434588|gb|EEE41753.1| putative rRNA pseudouridine synthase [Methanobrevibacter smithii
DSM 2375]
gi|288861191|gb|EFC93489.1| putative rRNA pseudouridine synthase [Methanobrevibacter smithii
DSM 2374]
Length = 320
Score = 99.0 bits (245), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR + G +E++ L TL D+ DA + Y + DES LR+ I P+E ++++K
Sbjct: 182 MAELRRTQVGSFTEDNHLSTLQDVTDAYHFYKEDGDESFLRKAIMPMERAADYLPKVVIK 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + G+ D I+ + + I + KGE VA + ++ + + G
Sbjct: 242 DSAVDAICHGANLASGGIAYLSDNIQKNSIVAIETLKGELVASGNSLFSSDEILNLESGF 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M D YP+ W
Sbjct: 302 AVNVSKVFMKTDIYPKMW 319
>gi|269986501|gb|EEZ92786.1| PUA domain containing protein [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 223
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 81/136 (59%), Gaps = 1/136 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR + SE+D LVTL D+ DA+Y Y++ D+ LL + + +E + ++ +
Sbjct: 84 MVELRRTKVSTLSEKDNLVTLQDLDDAVYFYEKENDDKLLNKCLDSIESAVDFIPKVFIS 143
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+ VC G+ + +PG++++ D +E + I++ KGE +AL A M+ + + G+
Sbjct: 144 DGAVDPVCRGSPLAVPGIVKFND-FGKEEVVGIMTLKGELIALGKAVMSADEIKSFKKGI 202
Query: 121 VAKIKRVIMDRDTYPR 136
K VIM DTYP+
Sbjct: 203 AVKTDSVIMKIDTYPK 218
>gi|147919305|ref|YP_686959.1| putative tRNA pseudouridine synthase B [Methanocella arvoryzae
MRE50]
gi|110622355|emb|CAJ37633.1| putative tRNA pseudouridine synthase B [Methanocella arvoryzae
MRE50]
Length = 328
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 78/138 (56%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E+D L+TLH +KDA +Y + DE LR+ I P+E L +II+K
Sbjct: 188 MYELRRTRSGPFAEDDSLITLHMLKDAYTIYKETGDEKPLRKCIYPMEYALRHLPKIIVK 247
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+ GA + G+ + E GI + + + + GE V++ A+MTT + + G
Sbjct: 248 DSAVDALARGASLHAQGISQLETGINKGDMVAVFTHMGEVVSIGRAKMTTDELMSAKEGQ 307
Query: 121 VAKIKRVIMDRDTYPRKW 138
V+M YP W
Sbjct: 308 ALDTVAVVMKPGIYPSAW 325
>gi|148642792|ref|YP_001273305.1| H/ACA RNA-protein complex component Cbf5p [Methanobrevibacter
smithii ATCC 35061]
gi|148551809|gb|ABQ86937.1| tRNA pseudouridine synthase B, TruB [Methanobrevibacter smithii
ATCC 35061]
Length = 320
Score = 98.2 bits (243), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 77/138 (55%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR + G +E++ L TL D+ DA + Y + DES LR+ I P+E ++++K
Sbjct: 182 MAELRRTQVGSFTEDNHLSTLQDVTDAYHFYKEDGDESFLRKAIMPMERAADYLPKVVIK 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + G+ D I+ + + I + KGE VA + ++ + + G
Sbjct: 242 DSAVDAICHGANLASGGIAYLSDNIQKNSIVAIETLKGELVASGNSLFSSDEILDLESGF 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ +V M D YP+ W
Sbjct: 302 AVNVSKVFMKTDIYPKMW 319
>gi|11497854|ref|NP_069076.1| H/ACA RNA-protein complex component Cbf5p [Archaeoglobus fulgidus
DSM 4304]
gi|3915164|sp|O30001.1|TRUB_ARCFU RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|2650403|gb|AAB90995.1| centromere/microtubule-binding protein (cbf5) [Archaeoglobus
fulgidus DSM 4304]
Length = 325
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G + ED TL D+ DA + + +E LR +I+P+E +I++K
Sbjct: 184 MQELRRTRTG-KFGEDMCYTLQDLLDAYVFWKEEGEEKYLREIIKPMEVAAAELPKIVIK 242
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + + GV E ++ D + I + K E VA+ A M + G+
Sbjct: 243 DSAVDAICHGANLSVRGVAYVEKNVKKDSTVAIFTLKNELVAIGRALMDAEDIYRLKKGI 302
Query: 121 VAKIKRVIMDRDTYPRKW 138
A I+RV+M+R YP+ W
Sbjct: 303 AADIQRVMMERGVYPKVW 320
>gi|327311510|ref|YP_004338407.1| H/ACA RNA-protein complex component Cbf5p [Thermoproteus uzoniensis
768-20]
gi|326947989|gb|AEA13095.1| H/ACA RNA-protein complex component Cbf5p [Thermoproteus uzoniensis
768-20]
Length = 334
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR E + VTL D+ DA+Y++ + D++ LR+V++P+E + G +I +K
Sbjct: 187 MRELRRVAVACFDEREA-VTLQDVADAVYVWRNYGDDTALRQVLKPIEEIARGLAKIWIK 245
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+A+C+GA + PGV+++E + + + KGE V + A +++ + + G+
Sbjct: 246 DGAVDAICHGAPLAAPGVVKFETPFNKGDLVAYFTLKGELVGVGRALVSSDDLKNMERGL 305
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA+ RV+M TYP W
Sbjct: 306 VARTDRVLMKPGTYPATW 323
>gi|408381892|ref|ZP_11179439.1| H/ACA RNA-protein complex component Cbf5p [Methanobacterium
formicicum DSM 3637]
gi|407815340|gb|EKF85925.1| H/ACA RNA-protein complex component Cbf5p [Methanobacterium
formicicum DSM 3637]
Length = 320
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 83/138 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R +E++ L TL D+ DA + + + DE+ LR + P+E K+++++
Sbjct: 182 MAELRRTRVADFTEDETLKTLQDVNDAYHYWIEDGDEAPLRECVLPMERAASHLKKVVVR 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA++A+C+GA + G+L+ +GI+ + + +++ KGE VA + TT+ + G+
Sbjct: 242 DSAIDALCHGADLAAGGILQLSEGIKRKDTLAVMTLKGELVAAGESLATTTEIDQAGSGI 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ IK+V M+ TYP W
Sbjct: 302 MVNIKKVFMEPGTYPMMW 319
>gi|126458682|ref|YP_001054960.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum calidifontis
JCM 11548]
gi|189036565|sp|A3MS77.1|TRUB_PYRCJ RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|126248403|gb|ABO07494.1| tRNA pseudouridine synthase B [Pyrobaculum calidifontis JCM 11548]
Length = 333
Score = 96.7 bits (239), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 186 MRELRRVAVSCFTEDEA-VTLQDLADAYYIWKKYGDDTYLRRVLLPIEEIARPLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + PGV ++E + + + KGE + + A + + + + G+
Sbjct: 245 DSAVDALCNGAPLAAPGVAKFEHPFSRGDLVAYFTLKGELIGIGRALVDSEEVKKMEKGL 304
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA+ RV+M R TYP W G KS
Sbjct: 305 VARTDRVVMPRGTYPPMWRRGGKS 328
>gi|325958561|ref|YP_004290027.1| tRNA pseudouridine synthase B [Methanobacterium sp. AL-21]
gi|325329993|gb|ADZ09055.1| tRNA pseudouridine synthase B [Methanobacterium sp. AL-21]
Length = 320
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E++ L TL D+ DA + DE +R I P+E + +I+++
Sbjct: 182 MAELRRTKSGPFTEDETLKTLQDLTDAYHYLKHDGDEKPIRECILPMESAVTHLNQIVVR 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + G+L I+ E + +++ KGE V TT + D G+
Sbjct: 242 DSAVDAICHGADLATNGILELSPDIKSGETVRVLTQKGELVGAGETVETTEGILRSDKGI 301
Query: 121 VAKIKRVIMDRDTYPRKW 138
+ IK+V M +TYP+ W
Sbjct: 302 MVNIKKVFMLPETYPKMW 319
>gi|150401644|ref|YP_001325410.1| H/ACA RNA-protein complex component Cbf5p [Methanococcus aeolicus
Nankai-3]
gi|189036538|sp|A6UWC6.1|TRUB_META3 RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|150014347|gb|ABR56798.1| putative rRNA pseudouridine synthase [Methanococcus aeolicus
Nankai-3]
Length = 331
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 85/148 (57%), Gaps = 11/148 (7%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG +E+D +V L D+ DA + ++ DE+ LR++I+P+E L +II+K
Sbjct: 181 MQELRRIVSGPFTEKD-IVYLQDLTDAYIFWKENGDETELRKIIKPMEYGLQHINKIIVK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG- 119
DSAV+A+C+GA + L GV + GI DE ++I + KGEA+ + A + T +
Sbjct: 240 DSAVDAICHGANVYLNGVSKLSKGIGADETVLIETLKGEAIGIGTALLNTKNVLKESKNE 299
Query: 120 ---------VVAKIKRVIMDRDTYPRKW 138
+ I+R+ M +TYP+ W
Sbjct: 300 EDNREKYKEPIVDIERIFMSPNTYPKMW 327
>gi|171184565|ref|YP_001793484.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum neutrophilum
V24Sta]
gi|226708675|sp|B1YA64.1|TRUB_THENV RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|170933777|gb|ACB39038.1| pseudouridylate synthase TruB domain protein [Pyrobaculum
neutrophilum V24Sta]
Length = 331
Score = 95.9 bits (237), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +EE+ VTL D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 186 MRELRRVAVSCYTEEE-TVTLQDVADAYYIWRKYGDDTYLRRVLLPIEEIARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + PGV ++E E + + KGE + + A + + + + G+
Sbjct: 245 DSAVDALCNGAPLAAPGVAKFEAPFSRGELVAYFTLKGELIGVGRALVDSEEVKKMEKGL 304
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA+ RV+M R TYP W
Sbjct: 305 VARTDRVVMKRGTYPPLW 322
>gi|18312233|ref|NP_558900.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum aerophilum
str. IM2]
gi|37089567|sp|Q8ZYB3.1|TRUB_PYRAE RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|18159675|gb|AAL63082.1| tRNA pseudouridine synthase B [Pyrobaculum aerophilum str. IM2]
Length = 333
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL DI DA Y++ + D++ LRRV+ P+E + +I ++
Sbjct: 186 MRELRRIAVSCYTEDEA-VTLQDIADAYYIWKHYGDDTYLRRVLLPIEEIARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + PG+ ++E + + + + KGE + + A + + + + G+
Sbjct: 245 DSAVDAICNGAPLAAPGISKFETPFSKGDLVAMFTLKGELIGIGRALVGSEEVKKMERGL 304
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA+ RV+M R TYP W KS
Sbjct: 305 VARTDRVVMRRGTYPAMWKRKAKS 328
>gi|288931536|ref|YP_003435596.1| rRNA pseudouridine synthase [Ferroglobus placidus DSM 10642]
gi|288893784|gb|ADC65321.1| rRNA pseudouridine synthase [Ferroglobus placidus DSM 10642]
Length = 335
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 81/138 (58%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+GI +EE TL D+ DA + + +E LR +I+P+E + +II+K
Sbjct: 185 MQELRRIRTGIFTEEK-CYTLQDLLDAYIFWKEEGEEEYLREIIQPMELAVANIPKIIIK 243
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+C+GA + GV E ++ E + I + K E VA+ + + G+
Sbjct: 244 DTAVDAICHGASLTAKGVAYVEKNVKKGERVAIFTLKQELVAIGRSNYDAEDILKIRGGI 303
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA+I+RVIM+R TYP W
Sbjct: 304 VAEIERVIMERGTYPSYW 321
>gi|288560155|ref|YP_003423641.1| H/ACA RNA-protein complex component Cbf5p [Methanobrevibacter
ruminantium M1]
gi|288542865|gb|ADC46749.1| H/ACA RNA-protein complex component Cbf5p [Methanobrevibacter
ruminantium M1]
Length = 320
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR R G E + LV LHD+ DA + Y + DE +R+ I+P+E +I +
Sbjct: 182 MAELRRTRVGPFDERNNDLVNLHDLTDAYHFYLEDGDEEHIRKAIQPMEVASSHLPQIFI 241
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KDSAV A+C+GA++ G+ + I+ + I S KGE VA + +++ + D G
Sbjct: 242 KDSAVEAICHGAKLGAGGICKLSKDIQKGNLVAIKSLKGELVAAGTSLLSSQEIMNADSG 301
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V +V MD YP+ W
Sbjct: 302 LVVDTNKVFMDTGIYPKGW 320
>gi|374327767|ref|YP_005085967.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum sp. 1860]
gi|356643036|gb|AET33715.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum sp. 1860]
Length = 330
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 84/144 (58%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SE++ VTL D+ DA +++ ++ D++ LRRV+ P+E +I ++
Sbjct: 186 MRELRRVAVSCYSEDEA-VTLQDVADAYHIWRRYGDDTYLRRVLLPIEEAARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + PGV ++E + + + + KGE + + A +++ + D G+
Sbjct: 245 DSAVDALCNGAPLAAPGVSKFETPFSAGDLVAMFTLKGELIGVGRALVSSEEVKKMDRGL 304
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V + RV+M R TYP W G ++
Sbjct: 305 VVRTDRVVMRRGTYPAMWKRGTRA 328
>gi|119872635|ref|YP_930642.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum islandicum
DSM 4184]
gi|189036566|sp|A1RTL7.1|TRUB_PYRIL RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|119674043|gb|ABL88299.1| tRNA pseudouridine synthase B [Pyrobaculum islandicum DSM 4184]
Length = 328
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E D V L D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 186 MRELRRIAVSCYTE-DETVALQDVADAYYIWRRYGDDTYLRRVLLPIEEIARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + PGV+++E E + + K E + A + + + G+
Sbjct: 245 DSAVDALCNGAPLAAPGVVKFETPFSKGELVAFFTLKDELIGFGRALVESEEAKKMERGL 304
Query: 121 VAKIKRVIMDRDTYPRKW 138
VA++ RVIM R TYP W
Sbjct: 305 VARVDRVIMRRGTYPPMW 322
>gi|118431292|ref|NP_147652.2| H/ACA RNA-protein complex component Cbf5p [Aeropyrum pernix K1]
gi|152031715|sp|Q9YDC3.2|TRUB_AERPE RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|109715686|dbj|BAE96920.1| Cbf5 [Aeropyrum pernix K1]
gi|116062614|dbj|BAA79974.2| small nucleolar RNP protein Cbf5 [Aeropyrum pernix K1]
Length = 354
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 81/139 (58%), Gaps = 1/139 (0%)
Query: 1 MIELRRNRSGIQSEEDGL-VTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR R+G SE+ GL V L D+ A+ + + + LLRRV+ P E + ++++
Sbjct: 207 MRELRRIRTGPFSEDSGLMVRLDDVAYAVIRWREEGKDDLLRRVVIPGEYSVCHIPKVLV 266
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
+DSAV ++ +GAQ+ PGV E+G+E + +++ KGE + L A + M + G
Sbjct: 267 RDSAVESLTHGAQLAAPGVAAVEEGVEKGGMVALMTLKGELIGLGKALASAQEMLEAERG 326
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V R+IM+R YPR W
Sbjct: 327 IVVSPTRIIMERGLYPRMW 345
>gi|255645843|gb|ACU23412.1| unknown [Glycine max]
Length = 257
Score = 92.4 bits (228), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 48/51 (94%)
Query: 94 VSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
++TKGEA+AL +A+MTT+ MATCDHGVVAKIKRV+MDRDTYP KWGLGP++
Sbjct: 1 MTTKGEAIALGIAEMTTAVMATCDHGVVAKIKRVVMDRDTYPWKWGLGPRA 51
>gi|291232967|ref|XP_002736425.1| PREDICTED: dyskerin-like, partial [Saccoglossus kowalevskii]
Length = 155
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGIQSE D +VT+HD+ DA + +D +KDES LRRV++PLE LLV HKRI+LK
Sbjct: 93 MAELRRVRSGIQSESDNMVTMHDVMDARWQHDHNKDESYLRRVVKPLEALLVSHKRIVLK 152
Query: 61 DSA 63
DSA
Sbjct: 153 DSA 155
>gi|379005362|ref|YP_005261034.1| rRNA pseudouridine synthase, putative [Pyrobaculum oguniense TE7]
gi|375160815|gb|AFA40427.1| rRNA pseudouridine synthase, putative [Pyrobaculum oguniense TE7]
Length = 331
Score = 91.7 bits (226), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL D+ DA Y++ ++ D++ LR V+ P+E + +I ++
Sbjct: 186 MRELRRVAVTCFTEDEA-VTLQDLADAYYIWKKYGDDTYLRSVLLPIEEIARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + PG+ ++E + + + + KGE + + A + + + + G
Sbjct: 245 DSAVDAVCHGAPLAAPGISKFEVPFSKGDIVAMFTLKGELIGIGRALVDSEEVKKMERGA 304
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V + RV+M R TYP W G K+
Sbjct: 305 VVRTDRVVMRRGTYPAMWKKGQKA 328
>gi|145590354|ref|YP_001152356.1| H/ACA RNA-protein complex component Cbf5p [Pyrobaculum arsenaticum
DSM 13514]
gi|189036564|sp|A4WH37.1|TRUB_PYRAR RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|145282122|gb|ABP49704.1| tRNA pseudouridine synthase B [Pyrobaculum arsenaticum DSM 13514]
Length = 331
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL D+ DA Y++ ++ D++ LR V+ P+E + +I ++
Sbjct: 186 MRELRRVAVTCFTEDEA-VTLQDVADAYYIWKKYGDDTYLRSVLLPIEEIARHLPKIWVR 244
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+AVC+GA + PG+ ++E + + + + KGE V + A + + + + G
Sbjct: 245 DSAVDAVCHGAPLAAPGISKFEVPFSKGDIVAMFTLKGELVGIGRALVDSEEVKKMERGA 304
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V + RV+M R TYP W G ++
Sbjct: 305 VVRTDRVVMRRGTYPAMWKKGQRA 328
>gi|290559671|gb|EFD92997.1| PUA domain containing protein [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 223
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 81/135 (60%), Gaps = 1/135 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR + SE++ LVTL D++DA+++Y KD LL + I +E + RI +
Sbjct: 84 MVELRRTKVSTLSEKNNLVTLQDLEDAIHMYVNEKDVRLLNQCIGNIESAIDFIPRIFVS 143
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+ V+ VC+G+ + +PG+++ D + E + I++ KGE +AL + +++ + + GV
Sbjct: 144 DTTVDPVCHGSPVAIPGIVKLTD-FDKGELVAIMTLKGEIIALGKSVLSSEDIKSIKRGV 202
Query: 121 VAKIKRVIMDRDTYP 135
K VIM+ TYP
Sbjct: 203 AVKTDSVIMNIGTYP 217
>gi|374628862|ref|ZP_09701247.1| tRNA pseudouridine synthase B [Methanoplanus limicola DSM 2279]
gi|373906975|gb|EHQ35079.1| tRNA pseudouridine synthase B [Methanoplanus limicola DSM 2279]
Length = 313
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 86/143 (60%), Gaps = 3/143 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR +SG +E+D + LHD+KDA +Y++ + ++L +I P E L+ +++++
Sbjct: 164 MVELRRTKSGPFTEKD-CIRLHDLKDAA-VYEEEGEPAMLSEMILPAERLVDTMPKVVIR 221
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C GA + GVL+ E + + +++ KGE V A A +++ D G+
Sbjct: 222 DSAVDAICRGAALAGVGVLQKES-YKRGSTVAVMTDKGELVCTAKALVSSEEYKPGDTGI 280
Query: 121 VAKIKRVIMDRDTYPRKWGLGPK 143
VA VIM+ TYPR W PK
Sbjct: 281 VAGSVAVIMEPGTYPRGWTKKPK 303
>gi|256083759|ref|XP_002578106.1| centromere/microtubule binding protein cbf5 [Schistosoma mansoni]
Length = 327
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 56/75 (74%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR+++G SE D LVT+HDI DA +LYD +DE+ LRRVI PLE LL+ HKRI+LK
Sbjct: 227 MEELRRSKTGFMSERDNLVTMHDILDAKWLYDNRRDETYLRRVIMPLEKLLIKHKRIMLK 286
Query: 61 DSAVNAVCYGAQIML 75
D+AV++ Y + L
Sbjct: 287 DTAVSSFTYRSMCRL 301
>gi|212373373|dbj|BAE96944.2| Cbf5 [Sulfolobus shibatae]
Length = 227
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 60/83 (72%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E LV LHD+ +A+YLY KDE+ LRRV+ P+E ++I++
Sbjct: 135 MRELRRTRSGIFTESTNLVKLHDLSEAIYLYKNCKDETELRRVLMPMEYATCEMPKLIIE 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYED 83
DSAVNA+ YGAQ+ +PG++ Y++
Sbjct: 195 DSAVNALAYGAQLAVPGIVAYQN 217
>gi|212373381|dbj|BAE96948.2| Cbf5 [Thermocladium modestius]
Length = 227
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 65/94 (69%), Gaps = 1/94 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G E++ VTLHD+ DA+YL+ Q+ DESLLRR ++P+E ++ RI ++
Sbjct: 135 MRELRRVRVGCFGEDEA-VTLHDLADALYLWKQYGDESLLRRYVKPVEYMVKHLPRIFIR 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
DSAV++V +GA + PGV + EDG+E D IV
Sbjct: 194 DSAVDSVAHGAALAAPGVAKIEDGVERDRMAAIV 227
>gi|212373366|dbj|BAE96941.2| Cbf5 [Stygiolobus azoricus]
Length = 227
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 66/103 (64%), Gaps = 11/103 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E+ LVTLH+I +A+Y+Y KDES LRR++ P+E + G ++++
Sbjct: 135 MRELRRTRSGIFTEDSNLVTLHEISEALYMYKHCKDESDLRRILLPMEFAVCGIPKVVID 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
D AVNA+ YGA + PGV+ +++ KGE VA+
Sbjct: 195 DDAVNAITYGATLNAPGVVAFQN-----------FKKGENVAI 226
>gi|41615239|ref|NP_963737.1| H/ACA RNA-protein complex component Cbf5p [Nanoarchaeum equitans
Kin4-M]
gi|42559714|sp|P60346.1|TRUB_NANEQ RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|40068963|gb|AAR39298.1| NEQ454 [Nanoarchaeum equitans Kin4-M]
Length = 348
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+ V L DI D++Y + + +E +R+V P+E + K+I +
Sbjct: 208 MQELRRIKSG-PFHENNSVYLQDIVDSLYFWKEEGNEEYIRKVFLPVEEAVKHLKKIYIL 266
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV A+ +GA + +PG+ + I+ + + I + KGE VA+ +A M + M G+
Sbjct: 267 DSAVAAIVHGANLAVPGIAKLYSNIKKGDLVSIHTLKGELVAIGIALMDSKEMLEKKRGI 326
Query: 121 VAKIKRVIMDRDTYPRKW 138
I+RV M YP+ W
Sbjct: 327 AVDIERVFMKPGLYPKMW 344
>gi|315425877|dbj|BAJ47530.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
gi|315427735|dbj|BAJ49331.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
gi|343484692|dbj|BAJ50346.1| conserved hypothetical protein [Candidatus Caldiarchaeum
subterraneum]
Length = 240
Score = 88.6 bits (218), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 78/141 (55%), Gaps = 1/141 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G EE VTL + +A Y + DE +R+V+ P+E L ++ +
Sbjct: 96 MEELRRTRAG-SLEEKNSVTLLQVYEAFEKYRETGDEEAVRKVVYPVEKCLELLPKVYIL 154
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+AVC+GA +M+ GV + + + E+ +++ K E VAL A M ++ G+
Sbjct: 155 DTAVDAVCHGADLMVAGVSMIDSDVAENSEVAVMTLKNELVALGKAAMDAQSILEASEGM 214
Query: 121 VAKIKRVIMDRDTYPRKWGLG 141
+ RVIM + TYP W G
Sbjct: 215 AVDVTRVIMHKSTYPPVWKGG 235
>gi|212373368|dbj|BAE96942.2| Cbf5 [Sulfolobus acidocaldarius]
Length = 227
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 62/83 (74%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E+ +VTL ++ +++YLY KDES LRR++ P+E + G ++I+
Sbjct: 135 MRELRRIRSGIFTEKTNMVTLQEVSESLYLYRNCKDESELRRILLPMEYGVCGIPKVIVS 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYED 83
D+AVNA+ YGA++ LPG+L Y++
Sbjct: 195 DTAVNAITYGAKLNLPGILAYQN 217
>gi|424812858|ref|ZP_18238098.1| pseudouridine synthase [Candidatus Nanosalinarum sp. J07AB56]
gi|339757080|gb|EGQ40663.1| pseudouridine synthase [Candidatus Nanosalinarum sp. J07AB56]
Length = 319
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 82/139 (58%), Gaps = 4/139 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGH-KRIIL 59
M +LRR G SE++ VTL + +A + Y D S LR V++P E VGH ++ +
Sbjct: 183 MPDLRRTSQGEISEDES-VTLQEAVEAYHEYSDTGDVSALRGVVKPPE-TAVGHLPKLAI 240
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
KD+AVNAV GA + G+ R ++ I + + I++ KGE VALA A+MT+ M + G
Sbjct: 241 KDTAVNAVANGADLGAGGISRLQEDISEGDRVAIMTLKGELVALATAEMTSEQMYE-ERG 299
Query: 120 VVAKIKRVIMDRDTYPRKW 138
A ++ V M+ + YPR+W
Sbjct: 300 AAADLESVHMEPERYPRRW 318
>gi|424813549|ref|ZP_18238742.1| pseudouridine synthase [Candidatus Nanosalina sp. J07AB43]
gi|339758696|gb|EGQ43950.1| pseudouridine synthase [Candidatus Nanosalina sp. J07AB43]
Length = 319
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR G + ED + D+ D + + + KD S L ++ P E + ++ +K
Sbjct: 182 MTELRRTMQG-EITEDEASKIQDVVDQYHFHLEGKD-SFLEEILYPREKAVEHLNKVAVK 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAV GA + G+ + + I E I I++ KGE VALA A+M + ++ D G
Sbjct: 240 DSAVNAVANGADLGASGISKLQGDINEGETIAIMTLKGELVALAEAEMNSQSLYDGD-GT 298
Query: 121 VAKIKRVIMDRDTYPRKW 138
A +K V MD TYP++W
Sbjct: 299 AATLKSVHMDPKTYPKRW 316
>gi|389860677|ref|YP_006362917.1| pseudouridylate synthase TruB domain-containing protein
[Thermogladius cellulolyticus 1633]
gi|388525581|gb|AFK50779.1| pseudouridylate synthase TruB domain protein [Thermogladius
cellulolyticus 1633]
Length = 264
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 82/138 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ L T+ ++ +A+ L+ + DE LLRRV++P+E +V ++++
Sbjct: 120 MRELRRTRTGPFKEDETLSTMQEVMEAVTLWREKGDERLLRRVVQPVEVSVVHLPKVMVL 179
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+A+ +GA + PGV + + + + KGE V+L ++Q + + + G+
Sbjct: 180 DTAVDAIAHGANLAAPGVASVTSDVRRGFAVAVFTLKGELVSLGVSQHDAAEIKNMNKGI 239
Query: 121 VAKIKRVIMDRDTYPRKW 138
V K KRV M YP+ W
Sbjct: 240 VVKTKRVYMQPGIYPQAW 257
>gi|307352550|ref|YP_003893601.1| pseudouridylate synthase TruB domain-containing protein
[Methanoplanus petrolearius DSM 11571]
gi|307155783|gb|ADN35163.1| pseudouridylate synthase TruB domain protein [Methanoplanus
petrolearius DSM 11571]
Length = 305
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 83/138 (60%), Gaps = 3/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR +SG +E + VTLHD+KDA+ Y + + L ++I P+E L +++++
Sbjct: 165 MVELRRTKSGPFTENE-CVTLHDLKDAVE-YAKEGNSGPLEKMILPVERLAGSLPKVVIR 222
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D AV+AVC+GA + G+L +D + + + +++ K E V + A +++ A D G+
Sbjct: 223 DKAVDAVCHGAVLAAVGILE-KDNYKKNARVAVMTQKDELVCVGKAIVSSEDYAKSDTGL 281
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + + VIM+ TY + W
Sbjct: 282 VIRPEIVIMEPGTYEKGW 299
>gi|212373360|dbj|BAE96938.2| Cbf5 [Acidianus infernus]
Length = 227
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E GLVTL ++ +A+Y++ KDE+ LR+++ P+E L G +IIL
Sbjct: 136 MRELRRIRSGIFTE-SGLVTLQEVSEALYMWKNCKDETDLRKILLPMEIGLCGIPKIILD 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYED 83
D+AVNA+ YGA PG++ Y++
Sbjct: 195 DNAVNAIAYGATANAPGIVAYQN 217
>gi|256252646|dbj|BAH97720.1| Cbf5 [Acidianus ambivalens]
Length = 227
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E GL TL ++ +A+Y++ KDE+ LR+++ P+E L G +IIL
Sbjct: 136 MRELRRIRSGIFTE-SGLFTLQEVSEALYMWKNCKDETDLRKILLPMEIGLCGIPKIILD 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYED 83
D+AVNA+ YGA +PG++ Y++
Sbjct: 195 DNAVNAIAYGATANVPGIVAYQN 217
>gi|256252648|dbj|BAH97721.1| Cbf5 [Acidianus brierleyi]
Length = 225
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 61/83 (73%), Gaps = 1/83 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E++ LVTL ++ +A+Y++ KDE LR+++ P+E G +I++
Sbjct: 135 MRELRRIRSGIFTEKN-LVTLQEVSEALYMWKSCKDEEDLRKILIPMEMAFCGIPKIVID 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYED 83
D+AV+A+ YGA +M+PG++ +++
Sbjct: 194 DNAVDAIAYGASVMIPGIVAFQN 216
>gi|374724505|gb|EHR76585.1| tRNA pseudouridine synthase b [uncultured marine group II
euryarchaeote]
Length = 322
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 79/136 (58%), Gaps = 1/136 (0%)
Query: 3 ELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDS 62
ELRR+ SG+ + +D VTL ++ DA++L+ + L R+I P+E LL+ +KDS
Sbjct: 184 ELRRDISGVFTLDD-CVTLQELADAVWLWKECDKPEALLRIIHPIEKLLLDLPSATVKDS 242
Query: 63 AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVA 122
A A+ +GA ++ PG++ GI +EI + + K EAV + T +A+ G VA
Sbjct: 243 AAAALAHGAPLLRPGLVSIASGIPSGKEIYVQTMKNEAVGVVTLTANTDDIASMSEGEVA 302
Query: 123 KIKRVIMDRDTYPRKW 138
+ V++D D YPR+W
Sbjct: 303 RPSMVLLDGDVYPRRW 318
>gi|212373352|dbj|BAE96934.2| Cbf5 [Thermosphaera aggregans DSM 11486]
Length = 228
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 58/93 (62%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV L D+ +A+YL+ KDE +LRRVI P+E + +I++
Sbjct: 135 MRELRRTRTGPYREDETLVKLQDVSEALYLWRVEKDERMLRRVILPVETAVTHLPKIVIN 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVI 93
D AV+A+ +GA + PGV+R D + + +
Sbjct: 195 DLAVDAIAHGASLAAPGVVRLTDNVSAGATVAV 227
>gi|88603514|ref|YP_503692.1| pseudouridylate synthase [Methanospirillum hungatei JF-1]
gi|88188976|gb|ABD41973.1| tRNA pseudouridine synthase B [Methanospirillum hungatei JF-1]
Length = 310
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 86/139 (61%), Gaps = 6/139 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIR-PLEGLLVGHKRIIL 59
M+ELRR RSG SE+D VTLH ++DA+ + D++ LR++IR PLE L G RI +
Sbjct: 167 MVELRRTRSGPFSEKD-CVTLHTLRDAVE-KARAGDDTYLRKIIRSPLEALH-GFPRIQM 223
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
K+SA +A+C+GA++ GV+ + D +M E++V++ + + + A +++S + + G
Sbjct: 224 KESAADAICHGARLSSRGVVSH-DTFQM-EDLVVMLAGDDFIGIGEALVSSSRIVPGEKG 281
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V + V+ D YP W
Sbjct: 282 LVVAPRLVMQDIGVYPAVW 300
>gi|212373375|dbj|BAE96945.2| Cbf5 [Sulfurisphaera ohwakuensis]
Length = 226
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 59/82 (71%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E++ LVTL +I +A+Y++ KDES LR+++ P+E G +I++
Sbjct: 135 MRELRRIRSGIFTEKN-LVTLQEISEALYMWKNCKDESDLRKILLPMEYATCGMPKILID 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
D+AV+A+ YGA + PG++ Y+
Sbjct: 194 DNAVDAISYGAMLTAPGIVAYQ 215
>gi|212373385|dbj|BAE96950.2| Cbf5 [Thermoproteus tenax]
Length = 227
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR G +EE+ TL DI DA+Y++ + D+++LR++++P+E + G +I +K
Sbjct: 135 MRELRRVGVGCFTEEEAF-TLQDIADAVYIWRNYGDDTVLRQIVKPIEEIARGVAKIWIK 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D AV+AVC+GA + PGV+++E+ +
Sbjct: 194 DGAVDAVCHGAPLAAPGVVKFEEPFQ 219
>gi|212373377|dbj|BAE96946.2| Cbf5 [Caldivirga maquilingensis]
Length = 227
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G EE+ V L+ +++A L+ + DESLLRR+IRP+E +++ RI ++
Sbjct: 135 MRELRRTRVGCFREEN-TVNLNTLREAYSLWRDYGDESLLRRLIRPVEEMVIHLPRIYIR 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGI 85
DSAV+A+ +GA + PGV + E+GI
Sbjct: 194 DSAVDAIAHGASLAAPGVAKVEEGI 218
>gi|161408031|dbj|BAF94119.1| Cbf5 [Thermofilum pendens]
gi|161408033|dbj|BAF94120.1| Cbf5 [Thermofilum librum]
Length = 229
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 61/94 (64%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E+ T+HD+ DA Y++ + + LR+V P+E + ++ ++
Sbjct: 136 MQELRRIRSGSLYEDRNCSTMHDVVDAYYIWKERGIDHFLRQVFLPVEAAIQHLPKVWIR 195
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
DSAV+AVC+GA + +PG+++ E GI+++ + I+
Sbjct: 196 DSAVDAVCHGAPLAVPGIVKLEGGIKVNSTVAIL 229
>gi|212373362|dbj|BAE96939.2| Cbf5 [Metallosphaera hakonensis]
Length = 226
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SGI +ED LVTL + +A+YLY+ ++E LRR++ P+E G +II+
Sbjct: 135 MRELRRTKSGI-FKEDTLVTLQQVSEALYLYNNCREEDELRRILIPMEYAFCGIPKIIVD 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
D VN++ YG+ +M PG++ ++
Sbjct: 194 DETVNSLAYGSPLMAPGIVAFQ 215
>gi|360043882|emb|CCD81428.1| putative centromere/microtubule binding protein cbf5 [Schistosoma
mansoni]
Length = 202
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 46/61 (75%)
Query: 15 EDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIM 74
+D LVT+HDI DA +LYD +DE+ LRRVI PLE LL+ HKRI+LKD+AV++ Y +
Sbjct: 116 KDNLVTMHDILDAKWLYDNRRDETYLRRVIMPLEKLLIKHKRIMLKDTAVSSFTYRSMCR 175
Query: 75 L 75
L
Sbjct: 176 L 176
>gi|212373344|dbj|BAE96930.2| Cbf5 [Staphylothermus marinus]
Length = 228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 62/94 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV + ++ +A+YL+ DE LR++I P+E + +II++
Sbjct: 135 MRELRRTRTGPYKEDETLVRMQEVSEALYLWRNKGDERYLRKIILPVETAIAHLPKIIIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV+AV +GA + +PG++R + +++ + I+
Sbjct: 195 DTAVDAVAHGAHLAVPGIVRLTKDVALNKTVAIL 228
>gi|432332028|ref|YP_007250171.1| rRNA pseudouridine synthase, putative [Methanoregula formicicum
SMSP]
gi|432138737|gb|AGB03664.1| rRNA pseudouridine synthase, putative [Methanoregula formicicum
SMSP]
Length = 360
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSG SE + TLHD++DA + + D S L ++I ++ + ++++
Sbjct: 169 MVELRRTRSGTFSESS-MYTLHDVQDAA-VAAREGDRSALEKMIVSVDAAVPELPIVVVR 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+A++A+C+GA + GV+ + D+ + ++S K E + L A + + + D G+
Sbjct: 227 DAAIDALCHGASLAGVGVVSTME-FAKDQTVAVLSGKKEFICLGRALVPSGSFRPGDTGL 285
Query: 121 VAKIKRVIMDRDTYPRKW 138
V V M TYPR W
Sbjct: 286 VIAPTTVFMQPGTYPRSW 303
>gi|256252638|dbj|BAH97716.1| Cbf5 [Pyrodictium abyssi]
Length = 228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+ GLV L D+ +A+Y + E LLR+ I+P+E + +I+++
Sbjct: 135 MRELRRTKSGPFREQHGLVRLQDLSEALYRWRNEGKEDLLRKYIKPIEYAVSHLPKIVIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D+AV+A+ +GA + +PG++R +GI+
Sbjct: 195 DTAVDAIAHGANLAVPGIVRLHEGIQ 220
>gi|256252634|dbj|BAH97714.1| Cbf5 [Ignicoccus pacificus]
Length = 230
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 59/94 (62%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG EE LV + ++ +A +L+D KD+SLL++ I P E + ++I++
Sbjct: 137 MRELRRTRSGPFHEEYNLVRMQELSEAKFLWDHLKDDSLLKKYIMPCEYAVCHMQKIMVG 196
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D AV+A+ +GA + PGV DGI+ + + IV
Sbjct: 197 DGAVDAIAHGAHVAAPGVAALTDGIKKGDVVAIV 230
>gi|385805535|ref|YP_005841933.1| H/ACA RNA-protein complex component Cbf5p [Fervidicoccus fontis
Kam940]
gi|383795398|gb|AFH42481.1| H/ACA RNA-protein complex component Cbf5p [Fervidicoccus fontis
Kam940]
Length = 236
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 81/139 (58%), Gaps = 3/139 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR SG ED V + ++ +A+YL+ + ++S LR++I P+E +I++K
Sbjct: 98 MRELRRTVSG-PFTEDHAVRMQELSEAIYLWKNYGNDSALRKMILPVELSTCILPKILVK 156
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA++++ YGA + GV Y + ++ ++ + ++K E + + ++ + + V
Sbjct: 157 DSAISSLLYGAPLAKGGVAAYSEDLQTNKIAAVFTSKIELI--GIYEILNNPKKNKNGKV 214
Query: 121 VAKIKRVIMDRDTYPRKWG 139
V + VIM+R++YP+ WG
Sbjct: 215 VGRPLAVIMERNSYPKNWG 233
>gi|212373354|dbj|BAE96935.2| Cbf5 [Hyperthermus butylicus DSM 5456]
Length = 228
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 57/86 (66%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E +GLV L ++ +A+Y + Q E LLR+ I P+E + +I+++
Sbjct: 135 MRELRRTRSGPFRERNGLVRLQELSEAIYRWKQEGKEDLLRKYILPIEYAVSHLPKIVVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D+AV+A+ +GA + +PG+ R +GI+
Sbjct: 195 DTAVDAIAHGANLAVPGIARLHEGIK 220
>gi|212373364|dbj|BAE96940.2| Cbf5 [Metallosphaera sedula DSM 5348]
Length = 226
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI +E D +VTL + +A+YLY +E LRR++ P+E G +II+
Sbjct: 135 MRELRRTRSGIFTE-DTVVTLQQVSEALYLYRNCGEEDELRRILIPMEMAFCGIPKIIVD 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
D VN++ YG+ +M PG++ ++
Sbjct: 194 DETVNSLAYGSPLMAPGIVAFQ 215
>gi|395644893|ref|ZP_10432753.1| rRNA pseudouridine synthase [Methanofollis liminatans DSM 4140]
gi|395441633|gb|EJG06390.1| rRNA pseudouridine synthase [Methanofollis liminatans DSM 4140]
Length = 533
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 78/142 (54%), Gaps = 11/142 (7%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGH-KRIIL 59
M ELRR RSG+ +E+ L TLH I+DA + +L ++ P+ G VG RI++
Sbjct: 390 MQELRRTRSGLFTEDKAL-TLHAIRDACVAAAAGDEAALSGIILPPVLG--VGEMPRIVV 446
Query: 60 KDSAVNAVCYGAQIMLPGVL---RYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+D+A++A+C+GA++ GVL +Y G + + ++S K E V L A +
Sbjct: 447 RDAAIDAICHGAKLAGVGVLSKTKYRKG----DLVAVLSEKDELVCLGEALVDAEAYKPG 502
Query: 117 DHGVVAKIKRVIMDRDTYPRKW 138
D G+V K V+M TYPR W
Sbjct: 503 DTGLVLAPKAVMMAAGTYPRGW 524
>gi|256252636|dbj|BAH97715.1| Cbf5 [Staphylothermus hellenicus]
Length = 228
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 60/94 (63%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV + ++ +A+YL+ DE LR++I P+E + +II++
Sbjct: 135 MRELRRTRTGPYKEDETLVRMQEVSEALYLWRNKGDERYLRKIILPVETAIAHLPKIIIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV+A+ +GA + +PG+ R + ++ + I+
Sbjct: 195 DTAVDAIAHGAHLAVPGIARLTRDVAPNKTVAIL 228
>gi|212373358|dbj|BAE96937.2| Cbf5 [Pyrolobus fumarii]
Length = 228
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E GLV L D+ +A+Y + Q + LLR+ I P+E + K+++++
Sbjct: 135 MRELRRTKSGPFREAYGLVKLQDLSEALYRWKQEGKDDLLRKYILPMEYAVAHLKKVVIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
DSAV+A+ +GA + +PG+ R I+ + + I
Sbjct: 195 DSAVDAIAHGAHLAVPGIARLHADIKKGDVVAIF 228
>gi|256252630|dbj|BAH97712.1| Cbf5 [Desulfurococcus amylolyticus Z-533]
Length = 228
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 59/94 (62%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV L DI +A+ L+ DE +RR+I P+E + +I++
Sbjct: 135 MRELRRTRTGPYREDETLVRLQDISEALALWRSSGDERYIRRIILPVETSIAHLPKIMIL 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV+A+ +GA + +PG+ R +E ++ + I+
Sbjct: 195 DTAVDAIAHGANLAVPGIARLTSNVERNKTVAIL 228
>gi|212373342|dbj|BAE96929.2| Cbf5 [Ignicoccus islandicus]
Length = 230
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E LVT+ ++ +A +L+++ KD+SLLR+ + P E + +++++
Sbjct: 137 MRELRRTRSGPFHEGYNLVTMQELSEAKFLWEEKKDDSLLRKYVMPCEYSVCHMQKVMVM 196
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D AV+A+ +GA + PGV DGI + + I
Sbjct: 197 DGAVDAIAHGAHVAAPGVAALTDGIRKGDVVAIF 230
>gi|212373356|dbj|BAE96936.2| Cbf5 [Pyrodictium occultum]
Length = 228
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+ GLV L ++ +A+Y + E LLR I+P+E + +I+++
Sbjct: 135 MRELRRTKSGPFREQHGLVRLQELSEALYRWKNEGKEDLLRSYIKPVEYAVSHLPKIVIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D+AV+A+ +GA + +PG+ R +GI+
Sbjct: 195 DTAVDAIAHGANLAVPGIARLHEGIK 220
>gi|126178488|ref|YP_001046453.1| pseudouridylate synthase [Methanoculleus marisnigri JR1]
gi|125861282|gb|ABN56471.1| tRNA pseudouridine synthase B [Methanoculleus marisnigri JR1]
Length = 302
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 75/138 (54%), Gaps = 2/138 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E +VTLH++ DA+ + E L + +I P + +++++
Sbjct: 161 MEELRRIRSG-SFDETTIVTLHELADAVAAAREGNHEPL-QGMILPPAAAVADLAKVVVR 218
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+AV+AVC+GA + GV+ E G E + IV+ +GE V L + +S + + G
Sbjct: 219 DTAVDAVCHGAVLAGVGVVGKEGGFAKGETVAIVTERGELVGLGKGLVNSSALKPGEPGF 278
Query: 121 VAKIKRVIMDRDTYPRKW 138
V V+M TYPR W
Sbjct: 279 VVAPTTVLMRPGTYPRGW 296
>gi|256252640|dbj|BAH97717.1| Cbf5 [Pyrodictium brockii]
Length = 228
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 56/86 (65%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG E+ GLV L ++ +A+Y + E LLR I+P+E + +I+++
Sbjct: 135 MRELRRTKSGPFREQHGLVRLQELSEALYRWKNEGKEDLLRSYIKPVEYAVSHLPKIVIR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D+AV+A+ +GA + +PG+ R +GI+
Sbjct: 195 DTAVDAIAHGANLAVPGIARLHEGIK 220
>gi|254167810|ref|ZP_04874660.1| TruB family pseudouridylate synthase (N terminal domain) protein
[Aciduliprofundum boonei T469]
gi|197623338|gb|EDY35903.1| TruB family pseudouridylate synthase (N terminal domain) protein
[Aciduliprofundum boonei T469]
Length = 285
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G EED TL D+ DA + ++ +E +R +IRP E ++ +II+K
Sbjct: 162 MEDLRRTATGHFREEDAH-TLQDLLDAYIFWKENGEEKYIRDIIRPAEDIVSFLPKIIVK 220
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ +GA + PGV D +E + + ++ GE +++++ + + +
Sbjct: 221 DSAVNALAHGAPLYKPGVTEM-DNVEKGNYVALYTSDGELISVSIVVL--------EDNI 271
Query: 121 VAKIKRVIMDRDTYPRKW 138
+AK RV+M+ P+K+
Sbjct: 272 IAKPFRVVME----PKKF 285
>gi|355571399|ref|ZP_09042651.1| rRNA pseudouridine synthase [Methanolinea tarda NOBI-1]
gi|354825787|gb|EHF10009.1| rRNA pseudouridine synthase [Methanolinea tarda NOBI-1]
Length = 303
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 72/139 (51%), Gaps = 5/139 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG ED TL ++DA + L R +I P E L G ++++
Sbjct: 162 MQELRRTRSG-PFREDSAHTLAGLRDAADAFRMGCVRPL-REMILPPESALAGLPEVVIR 219
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
DSAV+A+C+GA + G+L G+ E + +++ KGE V A ++++ + G
Sbjct: 220 DSAVDALCHGAALAGVGIL--SSGVFRKGERVAVMTQKGELVCTGQALVSSTQFSPGKPG 277
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V + V + R TYP W
Sbjct: 278 LVIAPESVFLPRGTYPPGW 296
>gi|256252644|dbj|BAH97719.1| Cbf5 [Ignisphaera aggregans]
Length = 228
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E +VTLH++ +A+Y++ DES LR++I P+E ++ +I++K
Sbjct: 135 MRELRRIGVAHFTENRDIVTLHEVSEALYIWRNLGDESFLRKMILPVEYIVAFLPKIVVK 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVI 93
DSAV+A+ +GAQ+ +PG+ I D+ + I
Sbjct: 195 DSAVDAIAHGAQLAVPGISIVAKNINRDDRVAI 227
>gi|289597166|ref|YP_003483862.1| pseudouridylate synthase TruB domain protein [Aciduliprofundum
boonei T469]
gi|289534953|gb|ADD09300.1| pseudouridylate synthase TruB domain protein [Aciduliprofundum
boonei T469]
Length = 286
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G EED TL D+ DA + ++ +E +R +IRP E ++ +II+K
Sbjct: 163 MEDLRRTATGHFREEDAH-TLQDLLDAYIFWKENGEEKYIRDIIRPAEDIVSFLPKIIVK 221
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ +GA + PGV D +E + + ++ GE +++++ + + +
Sbjct: 222 DSAVNALAHGAPLYKPGVTEM-DNVEKGNYVALYTSDGELISVSIVVL--------EDNI 272
Query: 121 VAKIKRVIMDRDTYPRKW 138
+AK RV+M+ P+K+
Sbjct: 273 IAKPFRVVME----PKKF 286
>gi|254167013|ref|ZP_04873866.1| TruB family pseudouridylate synthase (N terminal domain) protein
[Aciduliprofundum boonei T469]
gi|197623869|gb|EDY36431.1| TruB family pseudouridylate synthase (N terminal domain) protein
[Aciduliprofundum boonei T469]
Length = 285
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 79/138 (57%), Gaps = 14/138 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G EED TL D+ DA + ++ +E +R +IRP E ++ +II+K
Sbjct: 162 MEDLRRTATGHFREEDAH-TLQDLLDAYIFWKENGEEKYMRDIIRPAEDIVSFLSKIIVK 220
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+ +GA + PGV+ D +E + + ++ GE +++++ + + +
Sbjct: 221 DSAVNALAHGAPLYKPGVIEM-DNVEKGGYVALYTSDGELISVSIVVL--------EDDI 271
Query: 121 VAKIKRVIMDRDTYPRKW 138
+AK RV+M+ P+K+
Sbjct: 272 IAKPFRVVME----PKKF 285
>gi|397780808|ref|YP_006545281.1| tRNA pseudouridine synthase B [Methanoculleus bourgensis MS2]
gi|396939310|emb|CCJ36565.1| tRNA pseudouridine synthase B [Methanoculleus bourgensis MS2]
Length = 306
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGH-KRIIL 59
M ELRR RSG +E V+LH++ DA + L + ++ P G V ++++
Sbjct: 162 MQELRRIRSG-PFDETAAVSLHELADAAAAAREGNLVPLQQMILSP--GAAVADLPKVVI 218
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
+D+AV+AVC+GA + GV E G E + I++ +GE V L A +++S + + G
Sbjct: 219 RDTAVDAVCHGAVLAGVGVTGREGGFGKGEVVAIMTGRGELVGLGKALVSSSALKPGEPG 278
Query: 120 VVAKIKRVIMDRDTYPRKW 138
+V V+M TYPR W
Sbjct: 279 LVVAPTTVLMQPGTYPRGW 297
>gi|212373387|dbj|BAE96951.2| Cbf5 [Vulcanisaeta distributa]
Length = 227
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R G +E++ VTL D+KDA LY + E LLR ++P+E ++ ++ ++
Sbjct: 135 MRELRRTRVGCFTEKEA-VTLQDLKDAYTLYKDYGVEDLLRTYVKPVEYMVRHLPKVWIR 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGI 85
DSAV+A+C+GA + +PG+++ + I
Sbjct: 194 DSAVDAICHGAALAVPGIVKLTNNI 218
>gi|256252632|dbj|BAH97713.1| Cbf5 [Desulfurococcus mucosus]
Length = 228
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV L D+ +A+ L+ + DE LRR++ P+E + +I++
Sbjct: 135 MRELRRTRTGPYREDETLVRLQDVSEALLLWRSNGDERYLRRIVLPVETSIAHLPKIMIL 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV+A+ +GA + PGV R I + I+
Sbjct: 195 DTAVDAIAHGANLAAPGVARLTRNIAKGSTVAIL 228
>gi|212373340|dbj|BAE96928.2| Cbf5 [Desulfurococcus mobilis]
Length = 228
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 56/94 (59%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV L D+ +A+ L+ + DE LRR++ P+E + +I++
Sbjct: 135 MRELRRTRTGPYREDETLVRLQDVSEALLLWRSNGDERYLRRIVLPVETSIAHLPKIMIL 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV+A+ +GA + PGV R I + I+
Sbjct: 195 DTAVDAIAHGANLAAPGVARLTRDIAKGSTVAIL 228
>gi|212373383|dbj|BAE96949.2| Cbf5 [Pyrobaculum neutrophilum V24Sta]
Length = 227
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +EE+ VTL D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 135 MRELRRVAVSCYTEEE-TVTLQDVADAYYIWRKYGDDTYLRRVLLPIEEIARHLPKIWVR 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
DSAV+A+C GA + PGV ++E
Sbjct: 194 DSAVDALCNGAPLAAPGVAKFE 215
>gi|344259157|gb|EGW15261.1| H/ACA ribonucleoprotein complex subunit 4 [Cricetulus griseus]
Length = 91
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 27/37 (72%), Positives = 33/37 (89%)
Query: 108 MTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGPKS 144
MTT+ ++TCDHG+V KIK VI+ RDTYPRKWGLGPK+
Sbjct: 1 MTTAVISTCDHGIVVKIKWVIVKRDTYPRKWGLGPKA 37
>gi|414876856|tpg|DAA53987.1| TPA: hypothetical protein ZEAMMB73_001838 [Zea mays]
Length = 308
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/48 (62%), Positives = 37/48 (77%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLE 48
M ELRR RSGI E+D +VT+HD+ DAM+ D +KDES LRRV+ PLE
Sbjct: 254 MQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPLE 301
>gi|256252652|dbj|BAH97723.1| Cbf5 [Pyrobaculum islandicum]
Length = 228
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E D V L D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 136 MRELRRIAVSCYTE-DETVALQDVADAYYIWRRYGDDTYLRRVLLPIEEIARHLPKIWVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
DSAV+A+C GA + PGV+++E +KGE VA
Sbjct: 195 DSAVDALCNGAPLAAPGVVKFETPF----------SKGELVAF 227
>gi|256252654|dbj|BAH97724.1| Cbf5 [Pyrobaculum organotrophum]
Length = 228
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 11/103 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E D V L D+ DA Y++ ++ D++ LRRV+ P+E + +I ++
Sbjct: 136 MRELRRIAVSCYTE-DETVALQDVADAYYIWRRYGDDTYLRRVLLPIEEIARHLPKIWVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
DSAV+A+C GA + PGV+++E +KGE VA
Sbjct: 195 DSAVDALCNGAPLAAPGVVKFETPF----------SKGELVAF 227
>gi|256252656|dbj|BAH97725.1| Cbf5 [Vulcanisaeta souniana JCM 11219]
Length = 227
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGH-KRIIL 59
M ELRR R G +E++ +TL D+KDA LY + E LLR ++ +E +VGH ++ +
Sbjct: 135 MRELRRIRVGCFTEKEA-ITLQDLKDAYTLYRDYGIEDLLRTYVKSVE-YMVGHLPKVWV 192
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIE 86
+DSAV+A+C+GA + +PG+++ + I+
Sbjct: 193 RDSAVDAICHGAALAVPGIVKLTNNIK 219
>gi|256252650|dbj|BAH97722.1| Cbf5 [Pyrobaculum arsenaticum]
Length = 228
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL D+ DA Y++ ++ D++ LR V+ P+E + +I ++
Sbjct: 136 MRELRRVAVTCFTEDEA-VTLQDVADAYYIWKKYGDDTYLRSVLLPIEEIARHLPKIWVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
DSAV+AVC+GA + PG+ ++E
Sbjct: 195 DSAVDAVCHGAPLAAPGISKFE 216
>gi|335437482|ref|ZP_08560258.1| H/ACA RNA-protein complex component Cbf5p [Halorhabdus tiamatea
SARL4B]
gi|335438879|ref|ZP_08561610.1| H/ACA RNA-protein complex component Cbf5p [Halorhabdus tiamatea
SARL4B]
gi|334890150|gb|EGM28424.1| H/ACA RNA-protein complex component Cbf5p [Halorhabdus tiamatea
SARL4B]
gi|334895830|gb|EGM33993.1| H/ACA RNA-protein complex component Cbf5p [Halorhabdus tiamatea
SARL4B]
Length = 295
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LVT+HD DA+ + + D LR V++P E LV + +
Sbjct: 170 MGDLRRAATDPFEDSD-LVTMHDFVDALAWWREDDDPQALREVVQPAERALVDLPSVTIA 228
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA +V GA + PGV+ +DG++ D E ++ A+ L + D G
Sbjct: 229 PSAAESVAEGAPVYAPGVIDADDGLDSDAEPLVACYIPNGAAVCLGTLVGDP--DSDEGT 286
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 287 VVDLERVLV 295
>gi|212373379|dbj|BAE96947.2| Cbf5 [Pyrobaculum oguniense TE7]
Length = 227
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 54/82 (65%), Gaps = 1/82 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +E++ VTL D+ DA Y++ ++ D++ LR V+ P+E + +I ++
Sbjct: 135 MRELRRVAVTCFTEDEA-VTLQDLADAYYIWKKYGDDTYLRSVLLPIEEIARHLPKIWVR 193
Query: 61 DSAVNAVCYGAQIMLPGVLRYE 82
DSAV+AVC+GA + PG+ ++E
Sbjct: 194 DSAVDAVCHGAPLAAPGISKFE 215
>gi|212373348|dbj|BAE96932.2| Cbf5 [Sulfophobococcus zilligii]
Length = 228
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G E++ LV+L ++ +A+YL+ DE L++V+ P+E +I++
Sbjct: 135 MRELRRTRTGPFREDETLVSLQEVSEALYLWRTRGDERYLKKVVLPVEVSTAHLPKILVL 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVI 93
D+AV+A+ +GA + PGV +E + + I
Sbjct: 195 DTAVDAIAHGANLAAPGVSMLTRNVEAGKTVAI 227
>gi|212373346|dbj|BAE96931.2| Cbf5 [Stetteria hydrogenophila]
Length = 229
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 58/94 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G SE GLVTL ++ +A+Y + LLRRV+ P E + +++++
Sbjct: 136 MRELRRTRTGPFSEARGLVTLQEVSEALYRLRVDGKDDLLRRVVLPGEYSVCHLPKVVVR 195
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV 94
D+AV ++ +GA + +PGV+ + I+ E + ++
Sbjct: 196 DTAVESLVHGASLAVPGVVMLHEDIKRGETVAVL 229
>gi|322372122|ref|ZP_08046663.1| H/ACA RNA-protein complex component Cbf5p [Haladaptatus
paucihalophilus DX253]
gi|320548131|gb|EFW89804.1| H/ACA RNA-protein complex component Cbf5p [Haladaptatus
paucihalophilus DX253]
Length = 290
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LV LHD+ DA+ + + ++ LR+++RP E L + +
Sbjct: 168 MGHLRRTATDPFDDTD-LVALHDLSDALARWREEDEDDWLRKIVRPAEDALTHLPSVTIA 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V +GAQ+ PGV+ E+ E D+ + + G AV L +M A D G
Sbjct: 227 PSAAEQVAHGAQVYAPGVIEAEEA-ERDQLVACHTPNGAAV--CLGRMVGD--ADADEGT 281
Query: 121 VAKIKRVIM 129
V +++RV++
Sbjct: 282 VVELERVLV 290
>gi|212373350|dbj|BAE96933.2| Cbf5 [Thermodiscus maritimus]
Length = 228
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 10/103 (9%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR R+G +EE GLV + DI A+ Y E LLR+ + P E + +++++
Sbjct: 135 MRELRRIRTGPFTEERGLVRMQDIAYALIRYRDEGKEDLLRKYVLPGEYSVCHLPKVVVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
DSAV ++ GA + +PG+ +GIE KG+ VAL
Sbjct: 195 DSAVESIVNGAMLAVPGIAMLHEGIE----------KGDTVAL 227
>gi|399576888|ref|ZP_10770643.1| tRNA pseudouridine synthase b [Halogranum salarium B-1]
gi|399238332|gb|EJN59261.1| tRNA pseudouridine synthase b [Halogranum salarium B-1]
Length = 288
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR R+ ++ LV LH DA+ + + DE+LLR V+ P E L R+ +
Sbjct: 166 MGHLRRTRTD-PFDDSNLVNLHTFTDALA-FAEEGDEALLREVVAPAERSLAHLPRVTIA 223
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V +GAQ+ PGV+ ++GI+ D +V T +AV + L ++ A + G
Sbjct: 224 PSAAEQVAHGAQVYAPGVINADEGIDRD-ALVACYTPDDAV-VCLGRLVGD--ADAERGE 279
Query: 121 VAKIKRVIM 129
V +++RV++
Sbjct: 280 VVRLERVLV 288
>gi|212373338|dbj|BAE96927.2| Cbf5 [Caldisphaera lagunensis DSM 15908]
Length = 228
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 55/86 (63%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G +E+ LVT+ D+ +A+Y + + + LLR+VI P E + +++++
Sbjct: 135 MRELRRIKTGPFNEDYYLVTMQDLTEAVYRFKTEEKDDLLRKVIIPGEYSVCELPKVLVR 194
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE 86
D+AV +V G+ + +PG+ Y +GI
Sbjct: 195 DTAVESVINGSPLAIPGISYYNEGIN 220
>gi|212373336|dbj|BAE96926.2| Cbf5 [Aeropyrum camini SY1 = JCM 12091]
Length = 229
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 1 MIELRRNRSGIQSEEDGL-VTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M ELRR R+G SE+ GL V L D+ A+ + + + LLRRV+ P E + ++++
Sbjct: 135 MRELRRVRTGPFSEDSGLMVRLDDVAYAVIRWREEGKDDLLRRVVIPGEYSVCHIPKVLV 194
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDGIE 86
+DSAV ++ +GAQ+ PGV E+G+E
Sbjct: 195 RDSAVESLTHGAQLAAPGVAAVEEGVE 221
>gi|257387781|ref|YP_003177554.1| H/ACA RNA-protein complex component Cbf5p [Halomicrobium mukohataei
DSM 12286]
gi|257170088|gb|ACV47847.1| pseudouridylate synthase TruB domain protein [Halomicrobium
mukohataei DSM 12286]
Length = 299
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 7/129 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +G + D LVT+ D+ DA+ + + DE+ L + P E L G+ + +
Sbjct: 178 MGELRRTATGDFDDRD-LVTMEDLVDALAEWTDNDDETWLHETVAPAERALAGYPTVTIA 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V +GA + PGV+ E E ++ V+ G AV L ++ A D GV
Sbjct: 237 PSAAREVAHGAPVYAPGVI--ETDAEQGADVCCVTPDGAAV--CLGRLVGDPDA--DSGV 290
Query: 121 VAKIKRVIM 129
+++RV++
Sbjct: 291 AVELERVLV 299
>gi|359417645|ref|ZP_09209749.1| tRNA pseudouridine synthase B, partial [Candidatus Haloredivivus
sp. G17]
gi|358031998|gb|EHK00798.1| tRNA pseudouridine synthase B [Candidatus Haloredivivus sp. G17]
Length = 90
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K+I +KDSAV+AV G+ + G+ + + GIE E+I I + KGE +AL A M + M
Sbjct: 6 KKIAVKDSAVHAVANGSDLGTMGISKLQGGIEQGEQIAITTLKGELIALGKALMNSEEMF 65
Query: 115 TCDHGVVAKIKRVIMDRDTYPRKW 138
A + V MD YP++W
Sbjct: 66 D-KQDTAASPENVYMDPSVYPKRW 88
>gi|162605696|ref|XP_001713363.1| putative pseudouridylate synthase [Guillardia theta]
gi|13794295|gb|AAK39672.1|AF083031_29 putative pseudouridylate synthase [Guillardia theta]
Length = 310
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 72/143 (50%), Gaps = 2/143 (1%)
Query: 2 IELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKD 61
+E R+ + G SE++ +T ++ D + ++ +K+ ++ VI LE + K++I+K
Sbjct: 156 LEYRQVKIGSISEDNFSITFYEFLDILSIHFFYKNTKVVENVIISLESIYRFLKKVIIKK 215
Query: 62 SAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVV 121
S +N + YG++I +PG+++ ++ ++I I+ + + T + ++
Sbjct: 216 SCINTIYYGSRIYVPGIIKISKSLKSGDKIKILDIDMNFIGIGKLYFTHKSKNFVKLQII 275
Query: 122 AKIKRVIMDRDTYPRKWGLGPKS 144
I V D+++ W G KS
Sbjct: 276 PSI--VTSDKNSIKYTWKFGKKS 296
>gi|448634493|ref|ZP_21674891.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula vallismortis
ATCC 29715]
gi|445749466|gb|EMA00911.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula vallismortis
ATCC 29715]
Length = 296
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 68/135 (50%), Gaps = 12/135 (8%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G ++ L T+HD+ DA+ D+ DES LR +I+P E LV R+ +
Sbjct: 168 MGDLRRTATGT-FDDASLSTMHDLVDALAFADE-GDESQLREIIQPAERALVHLPRVRIA 225
Query: 61 DSAVNAVCYGAQIMLPGVL---RYEDG---IEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
SA V GA + PGV+ E G E ++V V+ G AV L T
Sbjct: 226 PSAAREVAEGAPVYAPGVIGAGPAETGDATPEQGSQVVCVTPDGAAVCLG----TLVGDP 281
Query: 115 TCDHGVVAKIKRVIM 129
D G+V +I RV++
Sbjct: 282 DADDGLVVEINRVLV 296
>gi|219853303|ref|YP_002467735.1| pseudouridylate synthase TruB domain-containing protein
[Methanosphaerula palustris E1-9c]
gi|219547562|gb|ACL18012.1| pseudouridylate synthase TruB domain protein [Methanosphaerula
palustris E1-9c]
Length = 299
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 72/138 (52%), Gaps = 3/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E TLH +KDA++ + D S L +I P+E + + ++++
Sbjct: 158 MQELRRTRSGTFDEMQAH-TLHALKDAVF-RAKEGDSSALDAMILPVEVAIPEVQTVVIR 215
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAV+A+C+GA + GV+ + E + +++ K E V L A + + + G+
Sbjct: 216 DSAVDAICHGAVLAGVGVVGVTK-FKRGERVAVLTEKKEFVCLGRALVDATAIIPGKPGL 274
Query: 121 VAKIKRVIMDRDTYPRKW 138
V V M TYPR W
Sbjct: 275 VVAPGTVFMTSGTYPRCW 292
>gi|76803088|ref|YP_331183.1| H/ACA RNA-protein complex component Cbf5p [Natronomonas pharaonis
DSM 2160]
gi|76558953|emb|CAI50549.1| tRNA/rRNA pseudouridine synthase Cbf5 [Natronomonas pharaonis DSM
2160]
Length = 292
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 6/130 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR ++G ++ LVT D D + + H D LL V+ P E L G R+ +
Sbjct: 168 MGPLRRTKTG-GFDDRTLVTFEDFADGLAFWRDHDDPELLCDVVAPAERALEGLPRLTVA 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYE-DGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
SA + + GA + PGVL +E DG DE ++ + A+ L + A G
Sbjct: 227 FSAASEIANGAPVYAPGVLAHELDG--ADEGSLVACYTPDGAAVCLGWLVGDPDAA--DG 282
Query: 120 VVAKIKRVIM 129
VA+++RV++
Sbjct: 283 TVAELERVLV 292
>gi|297743584|emb|CBI36451.3| unnamed protein product [Vitis vinifera]
Length = 82
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 11 IQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNA 66
I+ EED +VT+HD+ +A ++Y+ ++DES LR I P E + +KR+ + +S NA
Sbjct: 27 IEQEEDNVVTMHDVMEAQWVYNHYRDESYLRWDIMPFEVDVTSYKRLFVNESTANA 82
>gi|448654558|ref|ZP_21681484.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula californiae
ATCC 33799]
gi|445766406|gb|EMA17533.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula californiae
ATCC 33799]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M +LRR +G + +DG L T+HD+ DA+ + DE+ LR +I+P E L R+ +
Sbjct: 168 MGDLRRTATG--TFDDGSLSTMHDLVDALA-FAADGDEAQLREIIQPAERALSHLPRVTI 224
Query: 60 KDSAVNAVCYGAQIMLPGVLRY------EDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
SA V GA + PGV+ + E+D ++V V+ G AV L T +
Sbjct: 225 APSAAREVAEGAPVYAPGVIETGPAEVGDATPEIDSQVVSVTPDGAAVCLG----TLVSD 280
Query: 114 ATCDHGVVAKIKRVIM 129
D G+V ++ RV++
Sbjct: 281 PDADSGLVVELDRVLV 296
>gi|448689511|ref|ZP_21695095.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula japonica DSM
6131]
gi|445777782|gb|EMA28742.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula japonica DSM
6131]
Length = 296
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 14/136 (10%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M +LRR +G + +DG L T+HD+ DA+ + + DE LR +I+P E LV RI +
Sbjct: 168 MGDLRRTATG--TFDDGSLSTMHDLMDALA-FAEDGDEEQLREIIQPAERALVHLPRITI 224
Query: 60 KDSAVNAVCYGAQIMLPGVLRYEDG------IEMDEEIVIVSTKGEAVALALAQMTTSTM 113
SA V GA + PGV+ E+D +IV V+ G AV L T
Sbjct: 225 APSAAREVAEGAPVYAPGVIEAGPAEVGGATPEIDSQIVAVTPDGAAVCLG----TLVGD 280
Query: 114 ATCDHGVVAKIKRVIM 129
+ G+V ++ RV++
Sbjct: 281 PGGESGLVVELDRVLV 296
>gi|212373334|dbj|BAE96925.2| Cbf5 [Acidilobus aceticus]
Length = 228
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 48/78 (61%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G E+ LVTL ++ +A+Y + + + LRR + P E + +++L+
Sbjct: 135 MRELRRIKTGPFDEDHNLVTLQELSEAVYRFREEGKDDYLRRAVLPGEVITCELPKVVLR 194
Query: 61 DSAVNAVCYGAQIMLPGV 78
DSAV +V GA + +PG+
Sbjct: 195 DSAVESVVNGAPLAVPGI 212
>gi|256252642|dbj|BAH97718.1| Cbf5 [Caldococcus noboribetus]
Length = 228
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 47/78 (60%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR ++G E+ LVTL ++ +A+Y + + + LRR + P E + +++L+
Sbjct: 135 MRELRRVKTGPFDEDHNLVTLQELSEAVYRFREEGKDDYLRRAVLPGEVITCELPKVVLR 194
Query: 61 DSAVNAVCYGAQIMLPGV 78
DSAV +V GA + PGV
Sbjct: 195 DSAVESVVNGAPLAAPGV 212
>gi|55379888|ref|YP_137738.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula marismortui
ATCC 43049]
gi|62901221|sp|Q5UXH1.1|TRUB_HALMA RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|55232613|gb|AAV48032.1| tRNA pseudouridine synthase B [Haloarcula marismortui ATCC 43049]
Length = 314
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M +LRR +G + +DG L T+HD+ DA+ + DE+ LR +I+P E L R+ +
Sbjct: 186 MGDLRRTATG--TFDDGSLSTMHDLVDALA-FAADGDEAQLREIIQPAERALSHLPRVTI 242
Query: 60 KDSAVNAVCYGAQIMLPGVLRY------EDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
SA V GA + PGV+ + E+D ++V V+ G AV L T +
Sbjct: 243 APSAAREVAEGAPVYAPGVIETGPAEVGDATPEIDSQVVSVTPDGAAVCLG----TLVSD 298
Query: 114 ATCDHGVVAKIKRVIM 129
D G+V ++ R+++
Sbjct: 299 PDADSGLVVELDRMLV 314
>gi|409722712|ref|ZP_11270127.1| H/ACA RNA-protein complex component Cbf5p [Halococcus hamelinensis
100A6]
gi|448724292|ref|ZP_21706800.1| H/ACA RNA-protein complex component Cbf5p [Halococcus hamelinensis
100A6]
gi|445785962|gb|EMA36743.1| H/ACA RNA-protein complex component Cbf5p [Halococcus hamelinensis
100A6]
Length = 295
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR S ++ LV+LHD+ DA+ D D L V+RP E L R+ +
Sbjct: 166 MGDLRRT-STTPFDDTKLVSLHDLADALAFADD-GDPEPLSDVVRPAERALTHLPRVTIA 223
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDG-----IEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DSA V GA + PGVL E+ D+E ++ + A+ L + A
Sbjct: 224 DSAAREVAEGAPVYAPGVLDVENTDPETVDPKDDEPLVACYTPDGAAVCLGRFVGDPDA- 282
Query: 116 CDHGVVAKIKRVIM 129
D G V ++RV++
Sbjct: 283 -DSGTVVDLERVLV 295
>gi|448641087|ref|ZP_21677874.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula sinaiiensis
ATCC 33800]
gi|445761612|gb|EMA12860.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula sinaiiensis
ATCC 33800]
Length = 296
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 70/136 (51%), Gaps = 14/136 (10%)
Query: 1 MIELRRNRSGIQSEEDG-LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIIL 59
M +LRR +G + +DG L T+HD+ DA+ + DE+ LR +I+P E L R+ +
Sbjct: 168 MGDLRRTATG--TFDDGSLSTMHDLVDALA-FAADGDEAQLREIIQPAERALSHLPRVTI 224
Query: 60 KDSAVNAVCYGAQIMLPGVLRY------EDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
SA V GA + PGV+ + E+D ++V V+ G AV L T +
Sbjct: 225 APSAAREVAEGAPVYAPGVIETGPAEVGDATPEIDSQVVSVTPDGAAVCLG----TLVSD 280
Query: 114 ATCDHGVVAKIKRVIM 129
D G+V ++ R+++
Sbjct: 281 PDADSGLVVELDRMLV 296
>gi|257053389|ref|YP_003131222.1| H/ACA RNA-protein complex component Cbf5p [Halorhabdus utahensis
DSM 12940]
gi|256692152|gb|ACV12489.1| pseudouridylate synthase TruB domain protein [Halorhabdus utahensis
DSM 12940]
Length = 295
Score = 55.1 bits (131), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 3/129 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LVT+HD DA+ + + D LR V++P E LV + +
Sbjct: 170 MGDLRRAATDPFDDAD-LVTMHDFVDALAWWREDDDPDPLREVVQPAERALVDLPSVTIA 228
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA +V GA I PGV+ +D ++ E ++ A+ L + A D G
Sbjct: 229 PSAAESVAEGAPIYAPGVIDADDDLDPAAEPLVACYIPNGAAVCLGTLAGDPDA--DEGT 286
Query: 121 VAKIKRVIM 129
V +++RV++
Sbjct: 287 VVELERVLV 295
>gi|154150056|ref|YP_001403674.1| pseudouridylate synthase [Methanoregula boonei 6A8]
gi|153998608|gb|ABS55031.1| Pseudouridylate synthase [Methanoregula boonei 6A8]
Length = 322
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 68/138 (49%), Gaps = 3/138 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG +E + TLH ++DA D L +I ++ + + ++
Sbjct: 172 MQELRRTRSG-AFDEQCMHTLHALQDACCAAAA-GDRVALDSMIVSVDAAVPDLPAVTVR 229
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+A++A+C+GA + GV+ D D+ + ++S K E + L + ++ G+
Sbjct: 230 DTAIDALCHGAALAGVGVIDC-DEFRKDQIVAVLSQKREFIGLGKSLAPSAAWKPGTPGL 288
Query: 121 VAKIKRVIMDRDTYPRKW 138
V + V M TYPR W
Sbjct: 289 VVAMTTVFMAPGTYPRGW 306
>gi|448668021|ref|ZP_21686264.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula amylolytica
JCM 13557]
gi|445768679|gb|EMA19758.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula amylolytica
JCM 13557]
Length = 296
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G ++ L T+HD+ DA+ D+ DE LR +I+P E LV R+ +
Sbjct: 168 MGDLRRTATGT-FDDASLSTMHDLVDALAFADE-GDEGKLREIIQPAERALVHLPRVTIA 225
Query: 61 DSAVNAVCYGAQIMLPGVLRY---EDG---IEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
SA V GA + PGV+ E G E ++V V+ G AV L T
Sbjct: 226 PSAAREVEDGAPVYAPGVIETGPAEAGDATPETGSQVVCVTPDGTAVCLG----TLVGDP 281
Query: 115 TCDHGVVAKIKRVIM 129
D G+V ++ RV++
Sbjct: 282 DADSGLVVELDRVLV 296
>gi|124484901|ref|YP_001029517.1| hypothetical protein Mlab_0072 [Methanocorpusculum labreanum Z]
gi|124362442|gb|ABN06250.1| pseudouridylate synthase TruB domain protein [Methanocorpusculum
labreanum Z]
Length = 282
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 70/133 (52%), Gaps = 6/133 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
MIELRR +SG S ++ TLH+I+DA+ L KDE+ L +I P E + +I+++
Sbjct: 154 MIELRRTKSGGFSCDEAH-TLHEIRDAVEL----KDEAALSAMILPPEQAIGDIPKIVIR 208
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D A AV GA + G + E + + +++ G+ +ALA + + + G+
Sbjct: 209 DKAAKAVANGAMLAGVGAISVEK-FSRGQSVALITQSGKLIALAESLFDSDKIDCGKPGL 267
Query: 121 VAKIKRVIMDRDT 133
+A+ RV ++
Sbjct: 268 IARSTRVFATPNS 280
>gi|433590230|ref|YP_007279726.1| rRNA pseudouridine synthase, putative [Natrinema pellirubrum DSM
15624]
gi|448332364|ref|ZP_21521608.1| H/ACA RNA-protein complex component Cbf5p [Natrinema pellirubrum
DSM 15624]
gi|433305010|gb|AGB30822.1| rRNA pseudouridine synthase, putative [Natrinema pellirubrum DSM
15624]
gi|445627468|gb|ELY80792.1| H/ACA RNA-protein complex component Cbf5p [Natrinema pellirubrum
DSM 15624]
Length = 301
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L V+ P E +L G +++ +SA + GA + PG
Sbjct: 194 LHSAHDFLDALAFWVEDDDPEPLFDVVDPAERILEGIPSVVVAESAAREIAQGAPVYGPG 253
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
V+ +DGIE +V T +A A+ L ++ S A D GVV ++RV++
Sbjct: 254 VIEADDGIEQG-SLVACYTPDDA-AVCLGELVASPDA--DEGVVVDLERVLV 301
>gi|448341353|ref|ZP_21530314.1| H/ACA RNA-protein complex component Cbf5p [Natrinema gari JCM
14663]
gi|445628035|gb|ELY81346.1| H/ACA RNA-protein complex component Cbf5p [Natrinema gari JCM
14663]
Length = 302
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L ++ P E +L G R+++ ++A V GA + PG
Sbjct: 195 LHSAHDFLDALGFWLEDDDPEPLYDIVDPAERILEGIPRVVIAENAAREVANGAPVYAPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
VL +DGI+ + + G AV L D GVV ++RV++
Sbjct: 255 VLEADDGIDHGSLVACYTPDGAAVCLG----ERVGAVDADSGVVVSLERVLV 302
>gi|344210874|ref|YP_004795194.1| H/ACA RNA-protein complex component Cbf5p/tRNA pseudouridine
synthase B [Haloarcula hispanica ATCC 33960]
gi|343782229|gb|AEM56206.1| H/ACA RNA-protein complex component Cbf5p / tRNA pseudouridine
synthase B [Haloarcula hispanica ATCC 33960]
Length = 296
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 67/135 (49%), Gaps = 12/135 (8%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G ++ L T+HD+ DA+ D+ DE LR +++P E LV R+ +
Sbjct: 168 MGDLRRTATGT-FDDASLSTMHDLVDALAFADE-GDEGKLREIVQPAERALVHLPRVTIA 225
Query: 61 DSAVNAVCYGAQIMLPGVLRY---EDG---IEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
SA V GA + PGV+ E G E ++V V+ G AV L T
Sbjct: 226 PSAAREVEDGAPVYAPGVIETGPAEAGDATPETGSQVVCVTPDGAAVCLG----TLVGDP 281
Query: 115 TCDHGVVAKIKRVIM 129
D G+V ++ RV++
Sbjct: 282 DADSGLVVELDRVLV 296
>gi|255619323|ref|XP_002540014.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
gi|223500118|gb|EEF22369.1| centromere/microtubule binding protein cbf5, putative [Ricinus
communis]
Length = 264
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 33/42 (78%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRR 42
M ELRR RSGI E+D +VT+HD+ DA +++D ++DE+ LRR
Sbjct: 223 MQELRRVRSGILGEKDNMVTMHDVMDAQWVFDNYRDETYLRR 264
>gi|448399345|ref|ZP_21570647.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena limicola
JCM 13563]
gi|445669252|gb|ELZ21865.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena limicola
JCM 13563]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L V+ P E +L G +++ +SA V GA + PG
Sbjct: 195 LHSAHDFLDALAFWLEDDDPDPLYEVVDPAERILEGIPSVVIAESAAREVAEGAPVYAPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
VL +D IE D + + G AV L T D G+ ++RV++
Sbjct: 255 VLDADDDIERDSLVACYTPNGAAVCLG----TFVGDLEADSGLAVDLERVLV 302
>gi|448386127|ref|ZP_21564335.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena
thermotolerans DSM 11522]
gi|445656025|gb|ELZ08867.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena
thermotolerans DSM 11522]
Length = 302
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 59/112 (52%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L V+ P E +L G +++ +SA + GA + PG
Sbjct: 195 LHSAHDFLDALAFWVEDDDPEPLFDVVDPAERILEGIPSVVVAESAAREIAQGAPVYGPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
V+ +DGIE +V T +A A+ L ++ S A D G+V ++RV++
Sbjct: 255 VIEADDGIEQG-SLVACYTPDDA-AVCLGELVASPDA--DEGIVVDLERVLV 302
>gi|149047242|gb|EDL99911.1| rCG36123 [Rattus norvegicus]
Length = 69
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%)
Query: 103 LALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKWGLGPK 143
+ + MTT ++ CD +V K KRVIM+R TYP KWGLGP+
Sbjct: 1 MTIVSMTTVIISLCDPSIVPKKKRVIMERPTYPPKWGLGPR 41
>gi|448338099|ref|ZP_21527151.1| H/ACA RNA-protein complex component Cbf5p [Natrinema pallidum DSM
3751]
gi|445623274|gb|ELY76696.1| H/ACA RNA-protein complex component Cbf5p [Natrinema pallidum DSM
3751]
Length = 302
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 54/112 (48%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L ++ P E +L G I++ ++A V GA + PG
Sbjct: 195 LHSAHDFLDALGFWLEDDDPEPLYDIVDPAERILEGIPSIVIAENAAREVANGAPVYAPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
VL +DGI+ + + G AV L A D G+V ++RV++
Sbjct: 255 VLEADDGIDHGSLVACYTPDGAAVCLG----ERVGAADADSGLVVALERVLV 302
>gi|432329405|ref|YP_007247549.1| PAPS reductase/FAD synthetase family protein [Aciduliprofundum sp.
MAR08-339]
gi|432136114|gb|AGB05383.1| PAPS reductase/FAD synthetase family protein [Aciduliprofundum sp.
MAR08-339]
Length = 581
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 42/69 (60%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+++ D A+ + G +M+PGV + + I++ +EI++ + G AVA+ +A+M++ M
Sbjct: 127 VVVDDGAIAPILSGKNLMVPGVTSFAEDIKIGDEIIVRDSSGRAVAVGIAKMSSEDMENA 186
Query: 117 DHGVVAKIK 125
GV KI+
Sbjct: 187 SRGVAVKIR 195
>gi|336477788|ref|YP_004616929.1| phosphoadenosine phosphosulfate reductase [Methanosalsum zhilinae
DSM 4017]
gi|335931169|gb|AEH61710.1| phosphoadenosine phosphosulfate reductase [Methanosalsum zhilinae
DSM 4017]
Length = 640
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+++ DSAV +C GA ++ PG++ + I+ +EE+V+V+ VA +M+ + M
Sbjct: 133 VMIDDSAVPFICNGASVLAPGIIDCDRNIQKNEEVVVVTRDKRVVAAGRTRMSGAEMIEA 192
Query: 117 DHGVVAKIK 125
DHGV K +
Sbjct: 193 DHGVGVKTR 201
>gi|397773801|ref|YP_006541347.1| rRNA pseudouridine synthase [Natrinema sp. J7-2]
gi|397682894|gb|AFO57271.1| rRNA pseudouridine synthase [Natrinema sp. J7-2]
Length = 302
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L ++ P E +L G +++ ++A V GA + PG
Sbjct: 195 LYSAHDFLDALGFWLEDDDPEPLYDIVDPAERILEGIPSVVIAENAAREVANGAPVYAPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
VL +DGI+ + + G AV L D GVV ++RV++
Sbjct: 255 VLEADDGIDHGSLVACYTPDGAAVCLG----ERVGAVDADSGVVVALERVLV 302
>gi|448345620|ref|ZP_21534509.1| H/ACA RNA-protein complex component Cbf5p [Natrinema altunense JCM
12890]
gi|445633553|gb|ELY86740.1| H/ACA RNA-protein complex component Cbf5p [Natrinema altunense JCM
12890]
Length = 302
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 18 LVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPG 77
L + HD DA+ + + D L V+ P E +L G +++ ++A V GA + PG
Sbjct: 195 LHSAHDFLDALGFWVEDDDPEPLYDVVDPAERILEGIPSVVIAENAAREVANGAPVYAPG 254
Query: 78 VLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
VL +DGI+ + + G AV L D GVV ++RV++
Sbjct: 255 VLEADDGIDHGSLVACYTPDGAAVCLG----ERVGAVDADSGVVVALERVLV 302
>gi|448732123|ref|ZP_21714405.1| H/ACA RNA-protein complex component Cbf5p [Halococcus salifodinae
DSM 8989]
gi|445805035|gb|EMA55262.1| H/ACA RNA-protein complex component Cbf5p [Halococcus salifodinae
DSM 8989]
Length = 292
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LV+LHD+ DA+ + + D + L +RP E L R+ +
Sbjct: 166 MGDLRRAGTTPFDDTD-LVSLHDLTDALA-FAEGDDIAPLADAVRPAERALTHLPRVTIA 223
Query: 61 DSAVNAVCYGAQIMLPGVLRYED--GIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
SA V GA + PGVL ED DE ++ + A+ L ++ A +
Sbjct: 224 PSAAREVAEGAPVYAPGVLSIEDTSATNPDESPLVACYTPDGAAVCLGRLVGE--ADAER 281
Query: 119 GVVAKIKRVIM 129
G V +++RV++
Sbjct: 282 GTVVELERVLI 292
>gi|448474342|ref|ZP_21602201.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum aidingense
JCM 13560]
gi|445817649|gb|EMA67518.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum aidingense
JCM 13560]
Length = 327
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 17/142 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + ++ L TL D+ DA+ + + D++LLR V+RP E LV + +
Sbjct: 190 MGHLRRTAT-VPFDDSDLHTLQDLFDALA-WAEDGDDALLREVVRPAEDALVHLPSVTVA 247
Query: 61 DSAVNAVCYGAQIMLPGVL-------------RYEDGIEMDEEIVIVSTKGEAVALALAQ 107
SA V GA + PGV+ DG + D+ ++ + A+ L +
Sbjct: 248 PSAARNVATGAPVYAPGVIDVDTADFGDDADRNASDGADGDDAPLVACHTPDGAAVCLGR 307
Query: 108 MTTSTMATCDHGVVAKIKRVIM 129
+ A D GVV ++RV++
Sbjct: 308 LVGDPDA--DSGVVVSLERVLV 327
>gi|448350214|ref|ZP_21539033.1| H/ACA RNA-protein complex component Cbf5p [Natrialba taiwanensis
DSM 12281]
gi|445637721|gb|ELY90869.1| H/ACA RNA-protein complex component Cbf5p [Natrialba taiwanensis
DSM 12281]
Length = 308
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D LR V+ P E +L G R+ +
Sbjct: 181 MGHLRRTATTPFDDTD-LYTATEFLDALAFWIEDADPEPLRAVVDPAERILEGIPRLTIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYE---DGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCD 117
DSA V GA + PGVL D + D +V T A A+ L ++ AT
Sbjct: 240 DSAAREVANGAPVYAPGVLDSNVSPDDLSTDRPLVACYTPNGA-AVCLGELVGDPEAT-- 296
Query: 118 HGVVAKIKRVIM 129
GVV ++RV++
Sbjct: 297 SGVVVDLERVLV 308
>gi|448592874|ref|ZP_21651921.1| H/ACA RNA-protein complex component Cbf5p [Haloferax elongans ATCC
BAA-1513]
gi|445730900|gb|ELZ82487.1| H/ACA RNA-protein complex component Cbf5p [Haloferax elongans ATCC
BAA-1513]
Length = 289
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ LV +HD+KDA+ + + DES +R V+ P E L + +
Sbjct: 167 MGHLRRTATD-PFDDTTLVDIHDLKDALA-FAEEGDESWIRDVVSPAERALTHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+A V GA + PGVL +D + + + G AV L ++T A + G
Sbjct: 225 DNAAREVANGAPVYAPGVLAVDDDASRGDLVACYTENGSAV--CLGELTGD--ADAESGT 280
Query: 121 VAKIKRVIM 129
V ++ V++
Sbjct: 281 VVSLESVLV 289
>gi|448329398|ref|ZP_21518698.1| H/ACA RNA-protein complex component Cbf5p [Natrinema versiforme JCM
10478]
gi|445614137|gb|ELY67818.1| H/ACA RNA-protein complex component Cbf5p [Natrinema versiforme JCM
10478]
Length = 302
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 20 TLH---DIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLP 76
TLH D DA+ + + D L V+ P E +L G +++ ++A V +GA + P
Sbjct: 194 TLHSAQDFLDALGFWLEDGDPGPLYDVVDPAERILEGIPSVVIAENAAREVAHGAPVYAP 253
Query: 77 GVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
GVL +DGI+ + + G AV L ++ S A + GVV ++RV++
Sbjct: 254 GVLEADDGIDHGALVACYTPNGAAV--CLGELAGSVDA--ESGVVVDLERVLV 302
>gi|448369906|ref|ZP_21556359.1| H/ACA RNA-protein complex component Cbf5p [Natrialba aegyptia DSM
13077]
gi|445650346|gb|ELZ03270.1| H/ACA RNA-protein complex component Cbf5p [Natrialba aegyptia DSM
13077]
Length = 308
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D LR V+ P E +L G R+ +
Sbjct: 181 MGHLRRTATTPFDDTD-LYTATEFLDALAFWIEDADPEPLRAVVDPAERILEGIPRLTIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYE---DGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCD 117
DSA V GA + PGVL + D D +V T A A+ L ++ AT
Sbjct: 240 DSAAREVANGAPVYAPGVLDSDVSPDDPSTDRPLVACYTPNGA-AVCLGELVGDPEAT-- 296
Query: 118 HGVVAKIKRVIM 129
GVV ++RV++
Sbjct: 297 SGVVVDLERVLV 308
>gi|307596216|ref|YP_003902533.1| Fmu (Sun) domain-containing protein [Vulcanisaeta distributa DSM
14429]
gi|307551417|gb|ADN51482.1| Fmu (Sun) domain protein [Vulcanisaeta distributa DSM 14429]
Length = 406
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 32 DQHKDESLLRRVIRPLEG---LLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMD 88
D + DE L + P++G + K ++ A +V GA + +PGV+R ++ I
Sbjct: 74 DVYPDEYLPEALWFPVKGPNKIPSARKYVLADKRAAESVYVGANLYVPGVVRMDEEIRRG 133
Query: 89 EEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
+E+ +++ GE VA +A+++ + T HG+ K
Sbjct: 134 DEVNVIAPNGEVVAFGIAEVSNDNIKTTRHGIAVK 168
>gi|448362271|ref|ZP_21550882.1| H/ACA RNA-protein complex component Cbf5p [Natrialba asiatica DSM
12278]
gi|445648792|gb|ELZ01740.1| H/ACA RNA-protein complex component Cbf5p [Natrialba asiatica DSM
12278]
Length = 308
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D LR V+ P E +L G R+ +
Sbjct: 181 MGHLRRTATTPFDDTD-LYTATEFLDALAFWIEDADPEPLRAVVDPAERILEGIPRLTIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYE---DGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCD 117
DSA V GA + PGVL + D D +V T A A+ L ++ AT
Sbjct: 240 DSAAREVANGAPVYAPGVLDSDVSPDDPSTDRPLVACYTPNGA-AVCLGELVGDPEAT-- 296
Query: 118 HGVVAKIKRVIM 129
GVV ++RV++
Sbjct: 297 SGVVVDLERVLV 308
>gi|448604882|ref|ZP_21657927.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sulfurifontis
ATCC BAA-897]
gi|445743203|gb|ELZ94686.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sulfurifontis
ATCC BAA-897]
Length = 289
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LVTLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA V GA + PGV + + + + G AV L ++ A D G
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAV--CLGELVGD--ADADSGT 280
Query: 121 VAKIKRVIM 129
V ++ V++
Sbjct: 281 VVSLEAVLV 289
>gi|448545831|ref|ZP_21626242.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-646]
gi|448547989|ref|ZP_21627333.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-645]
gi|448556853|ref|ZP_21632447.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-644]
gi|445703641|gb|ELZ55567.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-646]
gi|445714691|gb|ELZ66449.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-645]
gi|445716202|gb|ELZ67953.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. ATCC
BAA-644]
Length = 289
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LVTLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADASRGDLVACFTDDGSAVCL 267
>gi|448410986|ref|ZP_21575528.1| H/ACA RNA-protein complex component Cbf5p [Halosimplex carlsbadense
2-9-1]
gi|445670875|gb|ELZ23471.1| H/ACA RNA-protein complex component Cbf5p [Halosimplex carlsbadense
2-9-1]
Length = 289
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 7/129 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR +G ++ LV+LHD DA+ D+ D LR V++P E LV +
Sbjct: 168 MGHLRRTVTG-SFDDRKLVSLHDFVDALAWADE-GDTDPLREVVQPAERALVDLPSATIA 225
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA V GA + PG++ +D D +V T EA A+ LA + A D GV
Sbjct: 226 ESAAREVAEGAPVYAPGLIDIDDVFRGD--LVACYTPDEA-AVCLATLAGDPEA--DSGV 280
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 281 VLDLERVLV 289
>gi|448731529|ref|ZP_21713828.1| H/ACA RNA-protein complex component Cbf5p [Halococcus
saccharolyticus DSM 5350]
gi|445791857|gb|EMA42476.1| H/ACA RNA-protein complex component Cbf5p [Halococcus
saccharolyticus DSM 5350]
Length = 292
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 6/131 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LV+LHD+ DA+ + + D LL ++P E L R+ +
Sbjct: 166 MGDLRRVGTTPFDDTD-LVSLHDLTDALA-FAEDDDTELLAAAVQPAERALAHLPRVTVA 223
Query: 61 DSAVNAVCYGAQIMLPGVLRYE--DGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
SA V GA + PGVL + G DE ++ A+ L ++ + A +
Sbjct: 224 PSAAREVAEGAPVYAPGVLSIDGASGTNADESPLVACYTPNGAAVCLGRLVGT--ADAES 281
Query: 119 GVVAKIKRVIM 129
G V ++RV++
Sbjct: 282 GTVVDLERVLV 292
>gi|383625235|ref|ZP_09949641.1| H/ACA RNA-protein complex component Cbf5p [Halobiforma lacisalsi
AJ5]
gi|448699352|ref|ZP_21699286.1| H/ACA RNA-protein complex component Cbf5p [Halobiforma lacisalsi
AJ5]
gi|445780337|gb|EMA31229.1| H/ACA RNA-protein complex component Cbf5p [Halobiforma lacisalsi
AJ5]
Length = 304
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D L + + DA+ + + D L ++ P E +L G + +
Sbjct: 181 MGDLRRTATSPFDDRD-LHSAQEFLDALAFWVEDDDPEPLYEIVDPAERILEGIPGVSIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V GA + PGV+ +DGIE E + + G AV L A GV
Sbjct: 240 PSAAREVAEGAPVYAPGVIEVDDGIESGELVACYTPDGAAVCLG----EFVGPADAGSGV 295
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 296 VVDLERVLV 304
>gi|448679123|ref|ZP_21689960.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula argentinensis
DSM 12282]
gi|445771221|gb|EMA22278.1| H/ACA RNA-protein complex component Cbf5p [Haloarcula argentinensis
DSM 12282]
Length = 296
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR +G ++ L T+H++ DA+ + + DE+ LR +I+P E LV R+ +
Sbjct: 168 MGDLRRTATGT-FDDASLSTMHELVDALA-FAEDGDEAQLREIIQPAERALVHLPRVTIA 225
Query: 61 DSAVNAVCYGAQIMLPGVLR---YEDG---IEMDEEIVIVSTKGEAVAL 103
SA V GA + PGV+ E G E+ +IV V+ G AV L
Sbjct: 226 PSAAREVAEGAPVYAPGVIEAGPAEAGDAVPEIGSQIVSVTPDGAAVCL 274
>gi|448578102|ref|ZP_21643537.1| H/ACA RNA-protein complex component Cbf5p [Haloferax larsenii JCM
13917]
gi|445726643|gb|ELZ78259.1| H/ACA RNA-protein complex component Cbf5p [Haloferax larsenii JCM
13917]
Length = 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ LV +HD+KDA+ + + DES +R V+ P E L + +
Sbjct: 167 MGHLRRTATD-PFDDTTLVDIHDLKDALA-FAEEGDESWIRDVVSPAERALTHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D+A V GA + PGVL ++ + + + G AV L ++T A + G
Sbjct: 225 DNAAREVANGAPVYAPGVLAVDNDASRGDLVACYTENGSAV--CLGELTGD--ADAESGT 280
Query: 121 VAKIKRVIM 129
V ++ V++
Sbjct: 281 VVSLESVLV 289
>gi|448565614|ref|ZP_21636481.1| H/ACA RNA-protein complex component Cbf5p [Haloferax prahovense DSM
18310]
gi|445715358|gb|ELZ67114.1| H/ACA RNA-protein complex component Cbf5p [Haloferax prahovense DSM
18310]
Length = 289
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTLHD+ DA+ + + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATTPFDDAD-LVTLHDLADALA-FAEEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADASRGDLVACFTDDGSAVCL 267
>gi|448569295|ref|ZP_21638555.1| H/ACA RNA-protein complex component Cbf5p [Haloferax lucentense DSM
14919]
gi|445724428|gb|ELZ76060.1| H/ACA RNA-protein complex component Cbf5p [Haloferax lucentense DSM
14919]
Length = 289
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LATLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAVCL 267
>gi|433435459|ref|ZP_20408119.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. BAB2207]
gi|432192359|gb|ELK49244.1| H/ACA RNA-protein complex component Cbf5p [Haloferax sp. BAB2207]
Length = 289
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LATLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAVCL 267
>gi|292656614|ref|YP_003536511.1| tRNA pseudouridine synthase B [Haloferax volcanii DS2]
gi|448290617|ref|ZP_21481764.1| H/ACA RNA-protein complex component Cbf5p [Haloferax volcanii DS2]
gi|291370953|gb|ADE03180.1| tRNA pseudouridine synthase B [Haloferax volcanii DS2]
gi|445578229|gb|ELY32640.1| H/ACA RNA-protein complex component Cbf5p [Haloferax volcanii DS2]
Length = 289
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LATLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAVCL 267
>gi|448317109|ref|ZP_21506667.1| H/ACA RNA-protein complex component Cbf5p [Natronococcus jeotgali
DSM 18795]
gi|445604533|gb|ELY58480.1| H/ACA RNA-protein complex component Cbf5p [Natronococcus jeotgali
DSM 18795]
Length = 300
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ L T D DA+ + + D L V+ P E +L G R+++
Sbjct: 178 MGHLRRTAT-TPFDDTTLHTARDFYDALAFWLEDDDPDPLFEVVDPAERILEGIPRVVIA 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA V GA + PGVL +D ++ ++ T + A+ L ++ + A + G
Sbjct: 237 ESAAEQVATGAPVYAPGVLEADD---VERGSLVACTTPDGAAVCLGELVGDSDA--ESGT 291
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 292 VVDLERVLV 300
>gi|300710518|ref|YP_003736332.1| H/ACA RNA-protein complex component Cbf5p [Halalkalicoccus jeotgali
B3]
gi|448294840|ref|ZP_21484917.1| H/ACA RNA-protein complex component Cbf5p [Halalkalicoccus jeotgali
B3]
gi|299124201|gb|ADJ14540.1| H/ACA RNA-protein complex component Cbf5p [Halalkalicoccus jeotgali
B3]
gi|445585822|gb|ELY40112.1| H/ACA RNA-protein complex component Cbf5p [Halalkalicoccus jeotgali
B3]
Length = 289
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 67/129 (51%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ L +L+D+ DA+ + + DE+ LR ++ P E L R+ +
Sbjct: 167 MGHLRRTAT-TPFDDASLCSLYDLADAIA-FAEEGDEAPLRDLLEPGERALAHLPRVTVA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA + + +GAQ+ PGV+ E + D+E ++ E A+ L ++ A + G
Sbjct: 225 PSAAHEIAHGAQVYAPGVIDAEG--DPDDEPLVACYTPEGSAVCLGRLVGDPAA--ETGR 280
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 281 VVALERVLV 289
>gi|448600354|ref|ZP_21655937.1| H/ACA RNA-protein complex component Cbf5p [Haloferax alexandrinus
JCM 10717]
gi|445735292|gb|ELZ86843.1| H/ACA RNA-protein complex component Cbf5p [Haloferax alexandrinus
JCM 10717]
Length = 289
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TLHD+KDA+ + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LATLHDLKDALA-FAAEGDESWLRDVVSPAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAVCL 267
>gi|448465610|ref|ZP_21598876.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum kocurii JCM
14978]
gi|445814942|gb|EMA64890.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum kocurii JCM
14978]
Length = 330
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L L D+ DA+ + + DESLLR V+RP E V + +
Sbjct: 199 MGHLRRTATDPFDDRD-LHPLQDLVDALA-WAEEGDESLLREVVRPAEDAFVHLPSVTIA 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEM--------DEEIVIVSTKGEAVALALAQMTTST 112
SA V GA + PGV+ + E D +V T +A A+ L ++
Sbjct: 257 PSAARNVATGAPVYAPGVIDADSAAETGVGDDGSDDPPLVACHTPDDA-AVCLGRLVGDP 315
Query: 113 MATCDHGVVAKIKRVIM 129
A + GVV ++RV++
Sbjct: 316 DA--ESGVVVSLERVLV 330
>gi|448583678|ref|ZP_21646901.1| H/ACA RNA-protein complex component Cbf5p [Haloferax gibbonsii ATCC
33959]
gi|445729031|gb|ELZ80630.1| H/ACA RNA-protein complex component Cbf5p [Haloferax gibbonsii ATCC
33959]
Length = 289
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTLHD+ DA+ + + DES LR V+ P E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LVTLHDLADALA-FAEEGDESWLRDVVSPAERALSHLPSVTVA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA + GA + PGV + + + + G AV L
Sbjct: 225 NSAAREIANGAPVYAPGVFDVDADASRGDLVACYTDDGSAVCL 267
>gi|313125693|ref|YP_004035963.1| tRNA pseudouridine synthase b [Halogeometricum borinquense DSM
11551]
gi|448285532|ref|ZP_21476774.1| H/ACA RNA-protein complex component Cbf5p [Halogeometricum
borinquense DSM 11551]
gi|312292058|gb|ADQ66518.1| tRNA pseudouridine synthase B [Halogeometricum borinquense DSM
11551]
gi|445576540|gb|ELY30993.1| H/ACA RNA-protein complex component Cbf5p [Halogeometricum
borinquense DSM 11551]
Length = 290
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTL+D+ DA+ +Q DES+LR V+ P E L + +
Sbjct: 169 MGHLRRTATDPFDDTD-LVTLYDLSDALAFAEQ-GDESVLRDVVAPAERALSHLPHVTIA 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
SA V GA + PGV +D E + V+ G AV L
Sbjct: 227 YSAAEQVAEGAPVYAPGVSEADDA-ERGSLVACVTPDGAAVCL 268
>gi|448610556|ref|ZP_21661231.1| H/ACA RNA-protein complex component Cbf5p [Haloferax mucosum ATCC
BAA-1512]
gi|445744648|gb|ELZ96121.1| H/ACA RNA-protein complex component Cbf5p [Haloferax mucosum ATCC
BAA-1512]
Length = 289
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ LV LHD+KDA+ + + DES +R ++ P E L + +
Sbjct: 167 MGHLRRTATD-PFDDSTLVDLHDLKDALA-FAEEGDESWIRDIVSPAERALTHLPAVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
SA V GA + PGV +D + + + G AV L
Sbjct: 225 RSAAREVATGAPVYAPGVFDVDDDASRGDLVACFTDDGAAVCL 267
>gi|448485433|ref|ZP_21606658.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum arcis JCM
13916]
gi|445818087|gb|EMA67954.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum arcis JCM
13916]
Length = 326
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 10/135 (7%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 196 MGHLRRTATDPFDDRD-LHTLQDLVDALA-WAEDGDDALLREVVRPAEDALTHLPAVTVA 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEM------DEEIVIVSTKGEAVALALAQMTTSTMA 114
SA +V GA + PGV+ +D D+ ++ + VA+ L ++ A
Sbjct: 254 RSAARSVATGAPVYAPGVIDVDDAAARPDRDGGDDPPLVACFTPDGVAVCLGRVVGDPDA 313
Query: 115 TCDHGVVAKIKRVIM 129
+ G V ++RV++
Sbjct: 314 --ESGTVVALERVLL 326
>gi|254168817|ref|ZP_04875658.1| Phosphoadenosine phosphosulfate reductase family protein
[Aciduliprofundum boonei T469]
gi|197622254|gb|EDY34828.1| Phosphoadenosine phosphosulfate reductase family protein
[Aciduliprofundum boonei T469]
Length = 580
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
I + D A+ + G +M PGV +GI+ +E++I + G A+A+ +A+M + M
Sbjct: 127 IEIDDGAIEPILSGKNLMAPGVKDCAEGIKNGDEVIIRDSAGRALAVGIARMDSEDMCKS 186
Query: 117 DHGVVAKIK 125
HG+ KI+
Sbjct: 187 THGMAVKIR 195
>gi|254168758|ref|ZP_04875600.1| Phosphoadenosine phosphosulfate reductase family protein
[Aciduliprofundum boonei T469]
gi|289596870|ref|YP_003483566.1| phosphoadenosine phosphosulfate reductase [Aciduliprofundum boonei
T469]
gi|197622384|gb|EDY34957.1| Phosphoadenosine phosphosulfate reductase family protein
[Aciduliprofundum boonei T469]
gi|289534657|gb|ADD09004.1| phosphoadenosine phosphosulfate reductase [Aciduliprofundum boonei
T469]
Length = 580
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
I + D A+ + G +M PGV +GI+ +E++I + G A+A+ +A+M + M
Sbjct: 127 IEIDDGAIEPILSGKNLMAPGVKDCAEGIKNGDEVIIRDSAGRALAVGIARMDSEDMCKS 186
Query: 117 DHGVVAKIK 125
HG+ KI+
Sbjct: 187 THGMAVKIR 195
>gi|284165530|ref|YP_003403809.1| pseudouridylate synthase [Haloterrigena turkmenica DSM 5511]
gi|284015185|gb|ADB61136.1| pseudouridylate synthase TruB domain protein [Haloterrigena
turkmenica DSM 5511]
Length = 304
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + HD DA+ + + D +L V+ P E +L G +++
Sbjct: 183 MGHLRRTATSPFDDRD-LHSAHDFLDALAYWREDGDPEVLLDVVDPAERILEGLPGVVIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
SA V GA + PGVL +D E + + G AV L
Sbjct: 242 PSAAREVANGAPVYDPGVLEVDDEARAGELVACYTPNGAAVCL 284
>gi|18978324|ref|NP_579681.1| hypothetical protein PF1952 [Pyrococcus furiosus DSM 3638]
gi|18894154|gb|AAL82076.1| iron-sulfur protein [Pyrococcus furiosus DSM 3638]
Length = 641
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV V GA ++ G+L E+ I+ +EE+++VS GE V + +A+ + +
Sbjct: 143 KWVIIDKGAVEPVKKGANVLPVGILEAEESIKRNEEVIVVSEDGEVVGVGIAKKDYAGLV 202
Query: 115 TCDHGVVAKIKRVIMDRDTYPRKWGLGPK 143
+ + G K+KR + WG G +
Sbjct: 203 SKERGTGIKMKR---------KAWGSGKR 222
>gi|397652400|ref|YP_006492981.1| hypothetical protein PFC_08820 [Pyrococcus furiosus COM1]
gi|393189991|gb|AFN04689.1| hypothetical protein PFC_08820 [Pyrococcus furiosus COM1]
Length = 633
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 26/89 (29%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV V GA ++ G+L E+ I+ +EE+++VS GE V + +A+ + +
Sbjct: 135 KWVIIDKGAVEPVKKGANVLPVGILEAEESIKRNEEVIVVSEDGEVVGVGIAKKDYAGLV 194
Query: 115 TCDHGVVAKIKRVIMDRDTYPRKWGLGPK 143
+ + G K+KR + WG G +
Sbjct: 195 SKERGTGIKMKR---------KAWGSGKR 214
>gi|448534361|ref|ZP_21621689.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum hochstenium
ATCC 700873]
gi|445704843|gb|ELZ56750.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum hochstenium
ATCC 700873]
Length = 347
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 67/142 (47%), Gaps = 18/142 (12%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 211 MGHLRRTATDPFDDRD-LRTLQDLVDALA-WAEDGDDALLRDVVRPAEDALAHLPAVTVA 268
Query: 61 DSAVNAVCYGAQIMLPGVLRYED-------------GIEMDEEIVIVSTKGEAVALALAQ 107
SA V GA + PGV+ +D G + D +V T ++VA+ L +
Sbjct: 269 RSAARNVATGAPVYAPGVIDVDDAAVPPAGDDEATPGDDADPPLVACFTP-DSVAVCLGR 327
Query: 108 MTTSTMATCDHGVVAKIKRVIM 129
+ A + G V ++RV++
Sbjct: 328 VAGDPDA--ESGAVVSLERVLL 347
>gi|448309730|ref|ZP_21499585.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum bangense
JCM 10635]
gi|445589396|gb|ELY43629.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum bangense
JCM 10635]
Length = 306
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + + DA+ + + D L V+ P E +L R+ +
Sbjct: 183 MGHLRRTATTPFDDTD-LHSASEFLDALAFWLEDDDPEPLYEVVDPAERILEDIPRVTIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
++A V GA + PGVL +DG+ + + + G AV L T D G
Sbjct: 242 ENAAREVANGAPVYAPGVLGIDDGVATGDLLACHTPNGAAVCLG----TLVGDPKADQGT 297
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 298 VVSLERVLV 306
>gi|169236401|ref|YP_001689601.1| H/ACA RNA-protein complex component Cbf5p [Halobacterium salinarum
R1]
gi|13959593|sp|Q9HPA4.1|TRUB_HALSA RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|226708668|sp|B0R686.1|TRUB_HALS3 RecName: Full=Probable tRNA pseudouridine synthase B; AltName:
Full=tRNA pseudouridine(55) synthase; Short=Psi55
synthase; AltName: Full=tRNA pseudouridylate synthase;
AltName: Full=tRNA-uridine isomerase
gi|10581191|gb|AAG19966.1| tRNA-pseudouridine synthase [Halobacterium sp. NRC-1]
gi|167727467|emb|CAP14255.1| tRNA/rRNA pseudouridine synthase Cbf5 [Halobacterium salinarum R1]
Length = 301
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAM-YLYDQHKDES------LLRRVIRPLEGLLVG 53
M LRR+ + + D LVTLHD+ DA+ +L D E LR ++P E L
Sbjct: 168 MGHLRRSATTPFDDTD-LVTLHDLADAVAWLRDTDDTEPPDAPADALRAAVQPAERALTH 226
Query: 54 HKRIILKDSAVNAVCYGAQIMLPGVLRYE--DGIEMDEEIVIVSTKGEAVALALAQMTTS 111
R+ + DSA + V GA + PGV+ D +V T G A+ L ++
Sbjct: 227 LPRLTIADSAAHEVATGAPVYAPGVIDTTALPTPPADGALVACYTAG-GTAVCLGRLVGD 285
Query: 112 TMATCDHGVVAKIKRVIM 129
A D GVV ++RV++
Sbjct: 286 PDA--DAGVVVALERVLV 301
>gi|161349979|ref|NP_280486.2| H/ACA RNA-protein complex component Cbf5p [Halobacterium sp. NRC-1]
Length = 310
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 65/138 (47%), Gaps = 13/138 (9%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAM-YLYDQHKDES------LLRRVIRPLEGLLVG 53
M LRR+ + + D LVTLHD+ DA+ +L D E LR ++P E L
Sbjct: 177 MGHLRRSATTPFDDTD-LVTLHDLADAVAWLRDTDDTEPPDAPADALRAAVQPAERALTH 235
Query: 54 HKRIILKDSAVNAVCYGAQIMLPGVLRYE--DGIEMDEEIVIVSTKGEAVALALAQMTTS 111
R+ + DSA + V GA + PGV+ D +V T G A+ L ++
Sbjct: 236 LPRLTIADSAAHEVATGAPVYAPGVIDTTALPTPPADGALVACYTAG-GTAVCLGRLVGD 294
Query: 112 TMATCDHGVVAKIKRVIM 129
A D GVV ++RV++
Sbjct: 295 PDA--DAGVVVALERVLV 310
>gi|448311944|ref|ZP_21501697.1| H/ACA RNA-protein complex component Cbf5p [Natronolimnobius
innermongolicus JCM 12255]
gi|445603565|gb|ELY57527.1| H/ACA RNA-protein complex component Cbf5p [Natronolimnobius
innermongolicus JCM 12255]
Length = 306
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + ++ DA+ + + D LLR V+ P E +L + +
Sbjct: 183 MGHLRRTATSPFDDRD-LYSAYEFLDALAFWREDDDADLLREVVDPAERILEDLPSVTIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V GA + PGVL D + + ++V T +A A+ L + + A GV
Sbjct: 242 RSAAAEVAEGAPVYAPGVLDVADDV-AEGQLVACYTPNDA-AVCLGEFVGAADAA--EGV 297
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 298 VVDLERVLV 306
>gi|389847937|ref|YP_006350176.1| tRNA pseudouridine synthase B [Haloferax mediterranei ATCC 33500]
gi|448618039|ref|ZP_21666384.1| H/ACA RNA-protein complex component Cbf5p [Haloferax mediterranei
ATCC 33500]
gi|388245243|gb|AFK20189.1| tRNA pseudouridine synthase B [Haloferax mediterranei ATCC 33500]
gi|445747594|gb|ELZ99049.1| H/ACA RNA-protein complex component Cbf5p [Haloferax mediterranei
ATCC 33500]
Length = 289
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ LV LHD KDA+ + + DES +R ++ P E L + +
Sbjct: 167 MGHLRRTATD-PFDDSTLVNLHDFKDALA-FAEEGDESWIRDIVSPAERALTHLPAVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGV +D + + + + G AV L
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDDDADHGDLVACFTDDGSAVCL 267
>gi|354610502|ref|ZP_09028458.1| tRNA pseudouridine synthase B [Halobacterium sp. DL1]
gi|353195322|gb|EHB60824.1| tRNA pseudouridine synthase B [Halobacterium sp. DL1]
Length = 296
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 13/136 (9%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKD-------ESLLRRVIRPLEGLLVG 53
M LRR + + D LVTL D+ DA+ Y D E LR V+ P E L
Sbjct: 167 MGHLRRTATTPFDDTD-LVTLQDLSDALAWYRDEDDTDPPGSPEEALRAVVAPAERALGH 225
Query: 54 HKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
+ + SA V GA + PGVL D D + ++ + A+ L ++
Sbjct: 226 LPSVTIAPSAAAEVAEGAPVYAPGVL---DADPADRDALVACYTPDRAAVCLGRLVGDPD 282
Query: 114 ATCDHGVVAKIKRVIM 129
A D G V ++RV++
Sbjct: 283 A--DSGTVVSLERVLV 296
>gi|448738520|ref|ZP_21720543.1| H/ACA RNA-protein complex component Cbf5p [Halococcus thailandensis
JCM 13552]
gi|445801404|gb|EMA51738.1| H/ACA RNA-protein complex component Cbf5p [Halococcus thailandensis
JCM 13552]
Length = 290
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LV++HD+ DA+ D D + L ++P E L R+ +
Sbjct: 166 MGDLRRVGTTPFDDAD-LVSMHDLTDALAFADD-GDPATLLDTVQPAERALTHLPRVEIA 223
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA + V GA I PGVL +D + +E ++ + A+ L ++ + G
Sbjct: 224 PSAAHEVAEGAPIYAPGVLGTDDLPDDADEPLVACYTPDGAAICLGRLVGDP--GMESGT 281
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 282 VVDLERVLV 290
>gi|429190181|ref|YP_007175859.1| rRNA pseudouridine synthase [Natronobacterium gregoryi SP2]
gi|448326093|ref|ZP_21515463.1| H/ACA RNA-protein complex component Cbf5p [Natronobacterium
gregoryi SP2]
gi|429134399|gb|AFZ71410.1| rRNA pseudouridine synthase, putative [Natronobacterium gregoryi
SP2]
gi|445613227|gb|ELY66935.1| H/ACA RNA-protein complex component Cbf5p [Natronobacterium
gregoryi SP2]
Length = 304
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + ++ L ++ + DA+ + + D L V+ P E +L +++
Sbjct: 181 MGDLRRTGTS-PFDDSSLHSVQEFLDALAFWVEDDDPEPLYEVVEPAERILEEIPGVVIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
++A + V GA + PGVL +D + + + G AV AL ++ S A + GV
Sbjct: 240 ENAAHEVAEGAPVYAPGVLTVDDDASRGDLVACYTPDGSAV--ALGELVGSVDA--ESGV 295
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 296 VVDLERVLV 304
>gi|448302902|ref|ZP_21492852.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum
sulfidifaciens JCM 14089]
gi|445593909|gb|ELY48076.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum
sulfidifaciens JCM 14089]
Length = 306
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + + DA+ + + D LL V+ P E +L + +
Sbjct: 183 MGHLRRTATTPFDDTD-LHSASEFLDALAFWLEDDDPELLYEVVDPAERILEDIPSVTIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
++A V GA + PGVL +D + + + + G AV L T D G
Sbjct: 242 ENAAREVANGAPVYAPGVLETDDDVATGDLLACYTPNGAAVCLG----TLVGDPEADQGT 297
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 298 VVSLERVLV 306
>gi|435850373|ref|YP_007311959.1| PAPS reductase/FAD synthetase family protein [Methanomethylovorans
hollandica DSM 15978]
gi|433661003|gb|AGB48429.1| PAPS reductase/FAD synthetase family protein [Methanomethylovorans
hollandica DSM 15978]
Length = 633
Score = 46.6 bits (109), Expect = 0.004, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+IL+ AV + GA ++ PGVL + GI +E+V++ G+ VA+ A+M+ M
Sbjct: 132 VILEQGAVKFILGGANLLAPGVLDADPGILEKDEVVVLDPTGQVVAIGRARMSGERMQER 191
Query: 117 DHGVVAKIK 125
GV K++
Sbjct: 192 PKGVAVKVR 200
>gi|448440151|ref|ZP_21588399.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum saccharovorum
DSM 1137]
gi|445690668|gb|ELZ42878.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum saccharovorum
DSM 1137]
Length = 333
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 12/137 (8%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L L D+ DA+ + + D++LLR V+RP E LV + +
Sbjct: 201 MGHLRRTATDPFDDRD-LRPLQDLVDALA-WAEEGDDTLLREVVRPAEDALVHLPSVTIA 258
Query: 61 DSAVNAVCYGAQIMLPGVL----RYEDGIEMDE----EIVIVSTKGEAVALALAQMTTST 112
SA V GA + PGV+ ++G E D+ ++ + A+ L ++
Sbjct: 259 PSAARNVATGAPVYAPGVIDADPTPDEGGEDDDAGRGPPLVACHTPDGAAVCLGRLVGDP 318
Query: 113 MATCDHGVVAKIKRVIM 129
A + GVV ++RV++
Sbjct: 319 DA--ESGVVVSLERVLV 333
>gi|448460436|ref|ZP_21597261.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum lipolyticum
DSM 21995]
gi|445807177|gb|EMA57263.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum lipolyticum
DSM 21995]
Length = 325
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L L D+ D + + + DE+ LR V+RP E LV + +
Sbjct: 193 MGHLRRTTTDPFDDGD-LHPLQDLVDGLA-WAEDGDEASLREVVRPAEDALVHLPSVTIA 250
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC---- 116
SA V GA + PGV+ DG+ DE G+ +A T A C
Sbjct: 251 PSAARNVATGAPVYAPGVID-ADGVGADES---PGRNGDGDPPLVACHTPDGAAVCLGRL 306
Query: 117 ------DHGVVAKIKRVIM 129
+ GVV ++RV++
Sbjct: 307 VGDPDAESGVVVSLERVLV 325
>gi|435848714|ref|YP_007310964.1| tRNA pseudouridine synthase B [Natronococcus occultus SP4]
gi|433674982|gb|AGB39174.1| tRNA pseudouridine synthase B [Natronococcus occultus SP4]
Length = 300
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ L T + DA+ + + D L ++ P E +L G ++++
Sbjct: 178 MGHLRRTAT-TPFDDTSLHTAQEFYDALAFWLEDDDPEPLFEIVDPAERILEGIPQVVIA 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA V GA + PGVL +D + ++ T + A+ L ++ D G
Sbjct: 237 ESAAEQVATGAPVYAPGVLEADDA---ERGSLVACTTPDGAAVCLGELVGDPED--DAGT 291
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 292 VVDLERVLV 300
>gi|448415661|ref|ZP_21578316.1| H/ACA RNA-protein complex component Cbf5p [Halosarcina pallida JCM
14848]
gi|445680362|gb|ELZ32809.1| H/ACA RNA-protein complex component Cbf5p [Halosarcina pallida JCM
14848]
Length = 290
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 7/129 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ L +L+D+ DA+ + + DES+LR V+ P E L + +
Sbjct: 169 MGHLRRTATD-PFDDSTLKSLYDLSDAL-AFAEEGDESVLREVVAPAERALSHLPHVTIA 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V GA + PGV +D D ++ + A+ L ++ A D G
Sbjct: 227 YSAAEQVAEGAPVYAPGVFETDDA---DRGSLVACVTPDDAAVCLGRLVGDPEA--DSGE 281
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 282 VVSLERVLI 290
>gi|298676120|ref|YP_003727870.1| phosphoadenosine phosphosulfate reductase [Methanohalobium
evestigatum Z-7303]
gi|298289108|gb|ADI75074.1| phosphoadenosine phosphosulfate reductase [Methanohalobium
evestigatum Z-7303]
Length = 645
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 39/69 (56%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+I+ DSAV + GA + PG++ + GI ++E+V+++ + + VA A+MT + M
Sbjct: 134 VIIDDSAVKPIANGANALSPGIIDADYGIVKEDEVVVLTPENKVVATGRAKMTGNKMVES 193
Query: 117 DHGVVAKIK 125
G K +
Sbjct: 194 SRGEAVKTR 202
>gi|448298501|ref|ZP_21488530.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum tibetense
GA33]
gi|445591697|gb|ELY45898.1| H/ACA RNA-protein complex component Cbf5p [Natronorubrum tibetense
GA33]
Length = 306
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 5/129 (3%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR+ + + D L + D DA+ + + D L + P E +L I +
Sbjct: 183 MGHLRRSATTPFDDSD-LHSTSDFLDALAFWVEDDDPDPLFEAVDPAERILEDIPSITIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
++A V GA + PGVL + G+ + ++V T EA A+ L + A D GV
Sbjct: 242 ENAAREVANGAPVYAPGVLAVDAGV-TEGDLVACYTPNEA-AVCLGEFVGD--ADADRGV 297
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 298 VVSLERVLV 306
>gi|448453323|ref|ZP_21593766.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum litoreum JCM
13561]
gi|445807643|gb|EMA57726.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum litoreum JCM
13561]
Length = 326
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 196 MGHLRRTATDPFDDRD-LHTLQDLVDALA-WAEDGDDTLLREVVRPAEDALTHLPAVTVA 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC---- 116
SA +V GA + PGV I++D+ G+ +A T +A C
Sbjct: 254 RSAARSVATGAPVYAPGV------IDVDDAAARPDRDGDDDPPLVACFTPDGVAVCLGRV 307
Query: 117 ------DHGVVAKIKRVIM 129
+ G V ++RV++
Sbjct: 308 VGDPDAESGTVVALERVLL 326
>gi|212224106|ref|YP_002307342.1| hypothetical protein TON_0957 [Thermococcus onnurineus NA1]
gi|212009063|gb|ACJ16445.1| 3'-phosphoadenosine 5'-phosphosulfate reductase [Thermococcus
onnurineus NA1]
Length = 630
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 42/72 (58%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K II+ + A+ + G+ ++ G+L E+ I++ +++V++S GE VA +A+ S +
Sbjct: 133 KWIIVDEGAIEPILSGSNLLPVGILEAEESIKVSDDVVLISPSGEVVATGIAKKDYSALI 192
Query: 115 TCDHGVVAKIKR 126
+ G K++R
Sbjct: 193 ARERGTGVKVRR 204
>gi|448427649|ref|ZP_21583964.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum terrestre JCM
10247]
gi|445678336|gb|ELZ30830.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum terrestre JCM
10247]
Length = 326
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 196 MGHLRRTATDPFDDRD-LHTLQDLVDALA-WAEDGDDALLREVVRPAEDALTHLPAVTVA 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC---- 116
SA +V GA + PGV I++D+ G+ +A T +A C
Sbjct: 254 RSAARSVATGAPVYAPGV------IDVDDAAARPDRDGDDDPPLVACFTPDGVAVCLGRV 307
Query: 117 ------DHGVVAKIKRVIM 129
+ G V ++RV++
Sbjct: 308 VGDPDAESGTVVALERVLL 326
>gi|448431202|ref|ZP_21584973.1| H/ACA RNA-protein complex component Cbf5p, partial [Halorubrum
tebenquichense DSM 14210]
gi|445688138|gb|ELZ40405.1| H/ACA RNA-protein complex component Cbf5p, partial [Halorubrum
tebenquichense DSM 14210]
Length = 335
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 60/139 (43%), Gaps = 12/139 (8%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + DE+ LR V+RP E L + +
Sbjct: 199 MGHLRRTATDPFDDRD-LRTLQDLVDALA-WAEDGDEAFLRDVVRPAEDALTHLPAVTVA 256
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC---- 116
SA V GA + PGV+ +D + +A +A T +A C
Sbjct: 257 RSAARNVATGAPVYAPGVIDVDDAAVPPAGDDGRTDGDDADPPLVACFTPDGVAVCLGRV 316
Query: 117 ------DHGVVAKIKRVIM 129
+ G V ++RV++
Sbjct: 317 VGDPDAESGAVVSLERVLL 335
>gi|448323124|ref|ZP_21512588.1| H/ACA RNA-protein complex component Cbf5p [Natronococcus
amylolyticus DSM 10524]
gi|445600310|gb|ELY54323.1| H/ACA RNA-protein complex component Cbf5p [Natronococcus
amylolyticus DSM 10524]
Length = 300
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 57/129 (44%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + ++ L T + DA+ + + D L V+ P E +L R+ +
Sbjct: 178 MGHLRRTAT-TPFDDSTLHTAQEFYDALAFWLEDDDPEPLYDVVEPAERILEHIPRVTIA 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA V GA + PGVL +D E + ++ G AV L T + G
Sbjct: 237 DSAAEQVATGAPVYAPGVLEADDA-ERGSLVACFTSDGAAVCLG----TLVGDSDAASGT 291
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 292 VVDLERVLI 300
>gi|395646060|ref|ZP_10433920.1| phosphoadenosine phosphosulfate reductase [Methanofollis liminatans
DSM 4140]
gi|395442800|gb|EJG07557.1| phosphoadenosine phosphosulfate reductase [Methanofollis liminatans
DSM 4140]
Length = 469
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
Query: 51 LVGHKR-IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMT 109
LV KR ++ D AV ++ G+ ++ PG++ ED + +E+ I+S GE + + A++
Sbjct: 118 LVPTKRYVVADDGAVASIREGSSLLAPGLVEIEDAVRAGDEVFILSKSGECIGVGRAKVD 177
Query: 110 TSTMATCDHGVVAKIKRVI-MDRDTYPRKW 138
+ T G + + ++ D P W
Sbjct: 178 AAEARTMTRGAIVRTRKAAPADASPGPASW 207
>gi|392512673|emb|CAD26655.2| PSEUDOURIDINE SYNTHASE B [Encephalitozoon cuniculi GB-M1]
Length = 168
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 44 IRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYED----GIEMDEEIVIVSTKGE 99
IR LEG G + L + A+ +C GA +M+PGVL+Y+D G E + IV+
Sbjct: 70 IRYLEGHGGGFYEVFLDEGALEPLCRGADVMIPGVLKYKDLIKKGFEAGDTIVVRIIGKS 129
Query: 100 AVALALAQMTTSTMATCDHGV 120
VA+ A + M GV
Sbjct: 130 IVAVGEAIVGLKDMEASSRGV 150
>gi|375081855|ref|ZP_09728931.1| Sun/NOL1/NOP nucleolar protein [Thermococcus litoralis DSM 5473]
gi|374743469|gb|EHR79831.1| Sun/NOL1/NOP nucleolar protein [Thermococcus litoralis DSM 5473]
Length = 383
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 37/69 (53%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
+++ A +V GAQ+ PGVL+ + GI+ +E+ I KG V + +A+M+ M
Sbjct: 90 KVVANKFAAESVYQGAQLYAPGVLKADKGIKEGDEVQIRDPKGLLVGIGIARMSAKEMVV 149
Query: 116 CDHGVVAKI 124
G+ ++
Sbjct: 150 ATRGIAVEV 158
>gi|390961892|ref|YP_006425726.1| hypothetical protein CL1_1736 [Thermococcus sp. CL1]
gi|390520200|gb|AFL95932.1| hypothetical protein CL1_1736 [Thermococcus sp. CL1]
Length = 631
Score = 43.9 bits (102), Expect = 0.020, Method: Composition-based stats.
Identities = 18/72 (25%), Positives = 41/72 (56%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K I++ D A+ + G+ ++ G++ E I ++++++VS GE +A +A+ S +
Sbjct: 133 KWIVVDDGAIEPILNGSNLLPVGIIEAEQSIRRNDDVILVSESGEVIATGIAKKDYSGLT 192
Query: 115 TCDHGVVAKIKR 126
+ + G K++R
Sbjct: 193 SRERGTGVKVRR 204
>gi|448499272|ref|ZP_21611286.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum coriense DSM
10284]
gi|445697609|gb|ELZ49671.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum coriense DSM
10284]
Length = 329
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR+ + + D L L D+ DA+ + + DE LR V+RP E L + +
Sbjct: 191 MGHLRRSATDPFDDRD-LDALQDLVDALA-WAEDGDEEALREVVRPAEDALTHLPAVTVA 248
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEA---VALALAQMTTSTMATC- 116
SA V GA + PGVL +D T G+A LA A T A C
Sbjct: 249 RSAARNVATGAPVYAPGVLDVDDAALPTAVSDDAPTDGDADPDPPLA-ACFTPDGTAVCL 307
Query: 117 ---------DHGVVAKIKRVIM 129
D G V ++RV++
Sbjct: 308 GRVVGDPDADGGTVVALERVLL 329
>gi|449329186|gb|AGE95460.1| pseudouridine synthase b [Encephalitozoon cuniculi]
Length = 203
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 44 IRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYED----GIEMDEEIVIVSTKGE 99
IR LEG G + L + A+ +C GA +M+PGVL+Y+D G E + IV+
Sbjct: 105 IRYLEGHGGGFYEVFLDEGALEPLCRGADVMIPGVLKYKDLVKKGFEAGDTIVVRIIGKS 164
Query: 100 AVALALAQMTTSTMATCDHGV 120
VA+ A + M GV
Sbjct: 165 IVAVGEAIVGLKDMEASSRGV 185
>gi|19173675|ref|NP_597478.1| PSEUDOURIDINE SYNTHASE B [Encephalitozoon cuniculi GB-M1]
Length = 203
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 40/81 (49%), Gaps = 4/81 (4%)
Query: 44 IRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYED----GIEMDEEIVIVSTKGE 99
IR LEG G + L + A+ +C GA +M+PGVL+Y+D G E + IV+
Sbjct: 105 IRYLEGHGGGFYEVFLDEGALEPLCRGADVMIPGVLKYKDLIKKGFEAGDTIVVRIIGKS 164
Query: 100 AVALALAQMTTSTMATCDHGV 120
VA+ A + M GV
Sbjct: 165 IVAVGEAIVGLKDMEASSRGV 185
>gi|448715153|ref|ZP_21702344.1| H/ACA RNA-protein complex component Cbf5p [Halobiforma
nitratireducens JCM 10879]
gi|445788045|gb|EMA38770.1| H/ACA RNA-protein complex component Cbf5p [Halobiforma
nitratireducens JCM 10879]
Length = 303
Score = 43.5 bits (101), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D L + DA+ + + D L V+ P E +L +++
Sbjct: 181 MGDLRRTATSPFDDTD-LHSAQAFLDALGFWVEDDDPEPLYEVVDPAERILEELPGVVIA 239
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
SA V GA + PGVL +D E D ++ + A+ L + A + GV
Sbjct: 240 PSAAREVAEGAPVYAPGVLEVDDPTEGD---LVACYTPDGAAVCLGEFVGP--ADAESGV 294
Query: 121 VAKIKRVIM 129
V ++RV++
Sbjct: 295 VVDLERVLI 303
>gi|448504662|ref|ZP_21614003.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum distributum
JCM 9100]
gi|448519103|ref|ZP_21617879.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum distributum
JCM 10118]
gi|445701872|gb|ELZ53844.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum distributum
JCM 9100]
gi|445704119|gb|ELZ56037.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum distributum
JCM 10118]
Length = 326
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L TL D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 196 MGHLRRTATDPFDDRD-LHTLQDLVDALA-WAEDGDDTLLREVVRPAEDALTHLPAVTVA 253
Query: 61 DSAVNAVCYGAQIMLPGVL 79
SA +V GA + PGV+
Sbjct: 254 RSAARSVATGAPVYAPGVI 272
>gi|294494848|ref|YP_003541341.1| phosphoadenosine phosphosulfate reductase [Methanohalophilus mahii
DSM 5219]
gi|292665847|gb|ADE35696.1| phosphoadenosine phosphosulfate reductase [Methanohalophilus mahii
DSM 5219]
Length = 633
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 70 GAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
GA ++ PGVL + GI+ ++E++I++T GE VA A+M M G K
Sbjct: 143 GANLLAPGVLDADSGIQKNDEVIIITTAGEVVATGRARMDGQEMMEAQKGTAVK 196
>gi|305663689|ref|YP_003859977.1| Fmu (Sun) domain-containing protein [Ignisphaera aggregans DSM
17230]
gi|304378258|gb|ADM28097.1| Fmu (Sun) domain protein [Ignisphaera aggregans DSM 17230]
Length = 390
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 32 DQHKDESLLRRVIRPLEG---LLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMD 88
D + DE L + P++G + + K++++ A +V G+ + +PGV++ IE
Sbjct: 62 DVYVDEELGEAIYIPIQGPYKVELHDKKVVVDKYAAESVYLGSHLYVPGVVKCSSDIEKG 121
Query: 89 EEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVI 128
+E+ IVS G V +A ++ S M G+ K R +
Sbjct: 122 DEVSIVSENGVVVGEGIAMLSCSEMLERKKGLAVKTIRSV 161
>gi|396081455|gb|AFN83072.1| RNA-binding protein [Encephalitozoon romaleae SJ-2008]
Length = 168
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 44 IRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEE---IVIVSTKGEA 100
IR LE I L D A+ +C GA +M+PG+L+Y+D I+ + E V++ G++
Sbjct: 70 IRYLEKHDSEFHEIFLDDGALGPLCRGADVMIPGILKYKDLIKKEFEAGDTVVIRIVGKS 129
Query: 101 -VALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKW 138
VA+ A ++ M + +GV ++ I D + Y +W
Sbjct: 130 IVAIGEAVISLQEMVSKGNGVGVEVYHRIGD-ELYCGEW 167
>gi|389851633|ref|YP_006353867.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase [Pyrococcus
sp. ST04]
gi|388248939|gb|AFK21792.1| putative 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase
[Pyrococcus sp. ST04]
Length = 627
Score = 43.1 bits (100), Expect = 0.034, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV V GA ++ G++ E+ I ++E+++VS GE + + +A+ + +
Sbjct: 129 KWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEVIGVGIAKKDYNGLV 188
Query: 115 TCDHGVVAKIKR 126
+ + G K+KR
Sbjct: 189 SRERGTGVKMKR 200
>gi|448392227|ref|ZP_21567097.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena salina JCM
13891]
gi|445664660|gb|ELZ17366.1| H/ACA RNA-protein complex component Cbf5p [Haloterrigena salina JCM
13891]
Length = 304
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + HD DA+ + + D + V+ P E +L +++
Sbjct: 183 MGHLRRTATSPFDDRD-LHSAHDFLDALAYWREDDDPEAVFDVVDPAERILEELPGVVIA 241
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
SA V GA + PGV+ +D + + + + G AV L
Sbjct: 242 PSAAREVANGATVYDPGVIETDDDAQAGDLVACYTPNGAAVCL 284
>gi|91773868|ref|YP_566560.1| hypothetical protein Mbur_1929 [Methanococcoides burtonii DSM 6242]
gi|91712883|gb|ABE52810.1| Phosphoadenosine phosphosulfate reductase fused to RNA-binding PUA
and 4Fe-4S binding domains [Methanococcoides burtonii
DSM 6242]
Length = 633
Score = 43.1 bits (100), Expect = 0.042, Method: Composition-based stats.
Identities = 19/67 (28%), Positives = 40/67 (59%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
++L AV+ + GA +++PG++ + I++ +E V+++ +GE +A+ A+M+ M
Sbjct: 132 VVLDSGAVSFILKGASVLVPGIIDADPQIQVSDETVVLTPEGEIIAVGRARMSGPDMIEH 191
Query: 117 DHGVVAK 123
GV K
Sbjct: 192 KKGVGVK 198
>gi|336252338|ref|YP_004595445.1| rRNA pseudouridine synthase [Halopiger xanaduensis SH-6]
gi|335336327|gb|AEH35566.1| rRNA pseudouridine synthase [Halopiger xanaduensis SH-6]
Length = 303
Score = 42.7 bits (99), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L + ++ DA+ + + D L ++ P E +L R+++
Sbjct: 182 MGHLRRTATTPFDDRD-LYSAYEFLDALAFWLEDDDPEPLSEIVDPAERILEDIPRVVIP 240
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVAL 103
+SA V GA + PGVL + + + + + G AV L
Sbjct: 241 ESAAREVANGAPVYEPGVLEVDSDVGEGDLVACYTPNGAAVCL 283
>gi|73668105|ref|YP_304120.1| hypothetical protein Mbar_A0559 [Methanosarcina barkeri str.
Fusaro]
gi|72395267|gb|AAZ69540.1| conserved hypothetical protein [Methanosarcina barkeri str. Fusaro]
Length = 634
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 70 GAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIM 129
GA ++ PGVL + I+ ++E+V+++ GE + A+MT M +HG K +
Sbjct: 146 GASVLAPGVLDADPEIKKEDEVVVLNPAGEVICCGRARMTGKEMYEENHGHAVKPR---W 202
Query: 130 DRDTYPRKWGLGPKS 144
+D P+K LG ++
Sbjct: 203 SKDPEPQKTKLGGQT 217
>gi|57642057|ref|YP_184535.1| tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family protein
[Thermococcus kodakarensis KOD1]
gi|57160381|dbj|BAD86311.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, containing
RNA-binding PUA domain [Thermococcus kodakarensis KOD1]
Length = 383
Score = 42.7 bits (99), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 53 GHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTST 112
G K+++ A +V GA + PGVL+ + GI+ +E+ I +G V + +A+M+
Sbjct: 88 GLKKVVANKFASESVYQGAMLYAPGVLKADKGIKPGDEVEIRDPRGLLVGIGIARMSGKE 147
Query: 113 MATCDHGVVAKI 124
M T G+ ++
Sbjct: 148 MITATRGLAVEV 159
>gi|448352634|ref|ZP_21541415.1| H/ACA RNA-protein complex component Cbf5p [Natrialba hulunbeirensis
JCM 10989]
gi|445641913|gb|ELY94984.1| H/ACA RNA-protein complex component Cbf5p [Natrialba hulunbeirensis
JCM 10989]
Length = 326
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D SLL ++ P E +L R+I+
Sbjct: 201 MGHLRRTATSPFDDTD-LYTATEFLDALSFWLEDDDPSLLYDIVEPAERILEDVPRVIID 259
Query: 61 DSAVNAVCYGAQIMLPGV--LRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+A V GA + PGV + E +E + + + G AV L ++ A +
Sbjct: 260 STAAREVATGAPVYAPGVQEVDAETVLERGDLVACYTQVGSAV--CLGELVGDPDA--ES 315
Query: 119 GVVAKIKRVIM 129
GVV ++RV++
Sbjct: 316 GVVVDLERVLV 326
>gi|452208085|ref|YP_007488207.1| tRNA/rRNA pseudouridine synthase Cbf5 [Natronomonas moolapensis
8.8.11]
gi|452084185|emb|CCQ37520.1| tRNA/rRNA pseudouridine synthase Cbf5 [Natronomonas moolapensis
8.8.11]
Length = 292
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR ++ ++ L T+ D+ D + + + D LL V+ P E L G + +
Sbjct: 168 MGDLRRTKTAGFTDAT-LSTMEDLADGLAFWRESDDADLLCEVVSPAERALEGLPTVTVA 226
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE-MDEEIVIVSTKGEAVALALAQMTTSTMATCDHG 119
SA V GA + PGV+ + G+ D ++ + A+ L + A + G
Sbjct: 227 PSAAREVAEGAPVYAPGVI--DAGLAGADPGDLVACYTPDGAAVCLGHLVGDPDA--ESG 282
Query: 120 VVAKIKRVIM 129
V +++RV++
Sbjct: 283 TVVELERVLV 292
>gi|389860537|ref|YP_006362776.1| PUA domain containing protein [Thermogladius cellulolyticus 1633]
gi|388525440|gb|AFK50638.1| PUA domain containing protein [Thermogladius cellulolyticus 1633]
Length = 175
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 46/94 (48%), Gaps = 8/94 (8%)
Query: 39 LLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTK- 97
+L R ++P G+ V A NA+ GA +M PGV R E D+ + + +
Sbjct: 83 VLERGLKPSPGIYVDR-------GATNALLRGADLMAPGVRRVEGNFSKDDIVFVYDEES 135
Query: 98 GEAVALALAQMTTSTMATCDHGVVAKIKRVIMDR 131
G+ VAL +A ++ + + + G V K+ + D+
Sbjct: 136 GKPVALGVALYSSDELKSLNRGKVVKVIHFVGDK 169
>gi|256810374|ref|YP_003127743.1| hypothetical protein Mefer_0417 [Methanocaldococcus fervens AG86]
gi|256793574|gb|ACV24243.1| phosphoadenosine phosphosulfate reductase [Methanocaldococcus
fervens AG86]
Length = 474
Score = 42.0 bits (97), Expect = 0.086, Method: Composition-based stats.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 53 GHKRII-LKDSAVNAV-CYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTT 110
+KRI+ +K+ V + I+ PG++ + D I+ ++++IV V LA +++
Sbjct: 123 AYKRIVKIKNDVVEVLKNKKGSILRPGIVEFTDDIKKGDDVIIVDENNNVVGTGLAVVSS 182
Query: 111 STMATCDHGVVAKIKRVIMDRDTY-PRK 137
+ + G V K++ I D D Y P+K
Sbjct: 183 EEIKKTEKGKVVKVRAFIKDEDKYKPKK 210
>gi|289191927|ref|YP_003457868.1| phosphoadenosine phosphosulfate reductase [Methanocaldococcus sp.
FS406-22]
gi|288938377|gb|ADC69132.1| phosphoadenosine phosphosulfate reductase [Methanocaldococcus sp.
FS406-22]
Length = 474
Score = 42.0 bits (97), Expect = 0.088, Method: Composition-based stats.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 3/85 (3%)
Query: 53 GHKRII-LKDSAVNAV-CYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTT 110
+K+II +KD V + I+ PG++ + D IE ++++IV G V + LA +++
Sbjct: 123 AYKKIIKIKDDVVEVLKNKKGSILRPGIIEFTDDIEERDDVIIVDESGRVVGVGLAVVSS 182
Query: 111 STMATCDHGVVAKIKRVIM-DRDTY 134
+ + G V K++ I D+D Y
Sbjct: 183 KDIKNMEKGKVVKVRFFIKDDKDDY 207
>gi|126179101|ref|YP_001047066.1| hypothetical protein Memar_1153 [Methanoculleus marisnigri JR1]
gi|125861895|gb|ABN57084.1| phosphoadenosine phosphosulfate reductase [Methanoculleus
marisnigri JR1]
Length = 469
Score = 41.6 bits (96), Expect = 0.094, Method: Composition-based stats.
Identities = 23/103 (22%), Positives = 53/103 (51%), Gaps = 11/103 (10%)
Query: 29 YLYDQHKDESLLR----RVIRPLEGLLVGHKRIILKDSAVNAVC-YGAQIMLPGVLRYED 83
Y D+H+ E L R ++P + + +++ D A+ ++ GA ++ PG++ +
Sbjct: 99 YFPDEHRWEPLPRPAAANYLKPTK------RYVVVDDGAIPSIRESGASVLAPGLVSIDP 152
Query: 84 GIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKR 126
+ +E+ I++ GE V + A+ +T T + GV+ + ++
Sbjct: 153 AVAEGDEVFILTKAGECVGVGRAKADAATAGTMERGVIVRTRK 195
>gi|401826487|ref|XP_003887337.1| PUA domain-containing protein [Encephalitozoon hellem ATCC 50504]
gi|392998496|gb|AFM98356.1| PUA domain-containing protein [Encephalitozoon hellem ATCC 50504]
Length = 168
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 5/100 (5%)
Query: 43 VIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMD---EEIVIVSTKGE 99
IR LE + + L + A+ +C GA IM+PG+L+Y+D I+ + + +IV G+
Sbjct: 69 TIRYLEENGSRYHEVFLDEGALGPLCRGADIMIPGILKYKDLIKEEFGAGDTIIVRIIGK 128
Query: 100 AV-ALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYPRKW 138
++ A+ A M+ M + +GV ++ I D + Y +W
Sbjct: 129 SIAAIGEAVMSLQEMMSRGNGVGIEVYHRIGD-ELYSGEW 167
>gi|448491321|ref|ZP_21608262.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum
californiensis DSM 19288]
gi|445693092|gb|ELZ45254.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum
californiensis DSM 19288]
Length = 338
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L L D+ DA+ + + D++LLR V+RP E L + +
Sbjct: 196 MGHLRRTATDPFDDRD-LRMLQDLVDALA-WAEDGDDALLRDVVRPAEDALTHLPAVTVA 253
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDG 84
SA V GA + PGV+ +D
Sbjct: 254 RSAARNVATGAPVYAPGVIDVDDA 277
>gi|222480224|ref|YP_002566461.1| H/ACA RNA-protein complex component Cbf5p [Halorubrum lacusprofundi
ATCC 49239]
gi|222453126|gb|ACM57391.1| pseudouridylate synthase TruB domain protein [Halorubrum
lacusprofundi ATCC 49239]
Length = 343
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 16/140 (11%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L L D+ D + + + D++ LR V+RP E LV + +
Sbjct: 209 MGHLRRTATDPFDDRD-LHPLQDLVDGL-TWAEEGDDAFLREVVRPAEDALVHLPSVTIA 266
Query: 61 DSAVNAVCYGAQIMLPGVLRYED-----------GIEMDEEIVIVSTKGEAVALALAQMT 109
SA V GA + PGV+ + + D +V T + A+ L ++
Sbjct: 267 PSAARNVATGAPVYAPGVIDVDSVSEGGEGDDGDDTDRDPPLVACHTP-DGAAVCLGRLV 325
Query: 110 TSTMATCDHGVVAKIKRVIM 129
A + GVV ++RV++
Sbjct: 326 GDPDA--ESGVVVSLERVLV 343
>gi|397781358|ref|YP_006545831.1| phosphoadenosine phosphosulfate reductase [Methanoculleus
bourgensis MS2]
gi|396939860|emb|CCJ37115.1| phosphoadenosine phosphosulfate reductase [Methanoculleus
bourgensis MS2]
Length = 469
Score = 41.2 bits (95), Expect = 0.13, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 45 RPLEGLLVGHKR--IILKDSAVNAVC-YGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAV 101
RP LL+ R +I+ D AV + GA ++ PG+ + + D+ +VI++ GE +
Sbjct: 111 RPNAALLMRPMRRYVIVDDGAVPFIRDEGASVLAPGLTSIDPSVAEDDPVVILTRTGECI 170
Query: 102 ALALAQMTTSTMATCDHGVVAKIKR 126
+ A++ T T + GV+ + +R
Sbjct: 171 GVGRAKVDAITAGTMERGVIVRTRR 195
>gi|159040978|ref|YP_001540230.1| Fmu (Sun) domain-containing protein [Caldivirga maquilingensis
IC-167]
gi|157919813|gb|ABW01240.1| Fmu (Sun) domain protein [Caldivirga maquilingensis IC-167]
Length = 398
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 3/93 (3%)
Query: 34 HKDESLLRRVIRPLEGL-LVGHKR--IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEE 90
++DE L + P EG VG R ++ A +V G+ + PGVL + I +E
Sbjct: 78 YRDEVLDEAIWLPTEGPNRVGASRRYVVADKYASESVYLGSNLYGPGVLYMPNDIHAGDE 137
Query: 91 IVIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
+ +VS G+ VAL +A++ S G+V +
Sbjct: 138 VNVVSPNGDVVALGVAKINASEFRRGFRGIVVE 170
>gi|242399817|ref|YP_002995242.1| Sun/NOL1/NOP nucleolar protein [Thermococcus sibiricus MM 739]
gi|242266211|gb|ACS90893.1| Sun/NOL1/NOP nucleolar protein [Thermococcus sibiricus MM 739]
Length = 383
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 35/69 (50%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
+++ A +V GAQ+ PGVL+ + GI +++ I KG V + +A+M M
Sbjct: 90 KVVANKFASESVYQGAQLYAPGVLKADKGIREGDQVQIRDPKGLLVGIGIARMNAKEMII 149
Query: 116 CDHGVVAKI 124
GV ++
Sbjct: 150 ATRGVAVEV 158
>gi|345005964|ref|YP_004808817.1| tRNA pseudouridine synthase B [halophilic archaeon DL31]
gi|344321590|gb|AEN06444.1| tRNA pseudouridine synthase B [halophilic archaeon DL31]
Length = 300
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 58/134 (43%), Gaps = 10/134 (7%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTL D+ D + + E LR ++ P E + I +
Sbjct: 172 MGALRRVATDPFDDTD-LVTLQDLADGLAWAREDGYEEYLREIVSPAERSMDHLPAITIA 230
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIE-----MDEEIVIVSTKGEAVALALAQMTTSTMAT 115
+A V GA + PGV+ +D D+ + + G AV L ++ A
Sbjct: 231 RNAAEQVAQGAPVYAPGVVETDDAAAALSPGADDLLACYTPDGSAV--CLGELVGDPDA- 287
Query: 116 CDHGVVAKIKRVIM 129
D G V +KRV++
Sbjct: 288 -DEGAVVSLKRVLV 300
>gi|325968037|ref|YP_004244229.1| Fmu (Sun) domain-containing protein [Vulcanisaeta moutnovskia
768-28]
gi|323707240|gb|ADY00727.1| Fmu (Sun) domain protein [Vulcanisaeta moutnovskia 768-28]
Length = 404
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 32 DQHKDESLLRRVIRPLEG---LLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMD 88
D ++D+ L + P++G + K ++ A +V GA + +PGV++ ++
Sbjct: 72 DVYQDKDLPEALWFPVKGPNKVPSARKYVLADKKASESVYVGANLYVPGVVKMNKDVKKG 131
Query: 89 EEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
+E+ I++ GE VA +A++ + G+ K
Sbjct: 132 DEVNIIAPNGEIVAFGIAEVNGDEARSIRRGIAVK 166
>gi|240102569|ref|YP_002958878.1| hypothetical protein TGAM_0512 [Thermococcus gammatolerans EJ3]
gi|239910123|gb|ACS33014.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS
reductase), containing one PUA domain and 2 4Fe-4S
binding domains [Thermococcus gammatolerans EJ3]
Length = 634
Score = 40.0 bits (92), Expect = 0.32, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 38/72 (52%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV + GA ++ GVL + I +++++++VS GE A +A+ S +
Sbjct: 136 KWVIVDKGAVEPIKNGANLLAVGVLEADPSIRVNDDVILVSEDGEVFATGIAKKDYSALI 195
Query: 115 TCDHGVVAKIKR 126
+ G K KR
Sbjct: 196 RGERGTGVKPKR 207
>gi|332158425|ref|YP_004423704.1| hypothetical protein PNA2_0784 [Pyrococcus sp. NA2]
gi|331033888|gb|AEC51700.1| hypothetical protein PNA2_0784 [Pyrococcus sp. NA2]
Length = 649
Score = 40.0 bits (92), Expect = 0.35, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV V GA ++ G+L E I+ ++E+++VS GE V + +A+ +
Sbjct: 135 KWVIIDKGAVEPVKKGANVLPVGILEAEKSIKRNDEVIVVSEDGEVVGIGIAKKDYEELV 194
Query: 115 TC-DHGVVAKIKR 126
+ G K+KR
Sbjct: 195 SPKSRGTGIKMKR 207
>gi|14590609|ref|NP_142677.1| RNA-binding protein [Pyrococcus horikoshii OT3]
gi|3257142|dbj|BAA29825.1| 175aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 175
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTK-GEAVALALAQMTTSTM 113
+R+++ + AV + GA +M PG++ ++GI+ + + +V K G +A+ +A M+ M
Sbjct: 91 RRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYGRPLAIGIALMSGKVM 150
Query: 114 ATCDHGVVAKI 124
+ G K+
Sbjct: 151 KEKNRGKAVKV 161
>gi|217035402|pdb|3D79|A Chain A, Crystal Structure Of Hypothetical Protein Ph0734.1 From
Hyperthermophilic Archaea Pyrococcus Horikoshii Ot3
Length = 179
Score = 39.7 bits (91), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTK-GEAVALALAQMTTSTM 113
+R+++ + AV + GA +M PG++ ++GI+ + + +V K G +A+ +A M+ M
Sbjct: 95 RRVVVDEGAVPHILNGADVMAPGIVDADEGIKEGDFVFVVEEKYGRPLAIGIALMSGKVM 154
Query: 114 ATCDHGVVAKI 124
+ G K+
Sbjct: 155 KEKNRGKAVKV 165
>gi|327310359|ref|YP_004337256.1| PUA domain-containing protein [Thermoproteus uzoniensis 768-20]
gi|326946838|gb|AEA11944.1| PUA domain containing protein [Thermoproteus uzoniensis 768-20]
Length = 379
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 48/103 (46%), Gaps = 4/103 (3%)
Query: 31 YDQHKDESLLRRVIRPLEGLL---VGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEM 87
+ ++DE L + P+ G K ++ + A +V G+ + PGVL+ G+
Sbjct: 63 FSVYRDEYLEEALWIPIRGPFNVPSARKEVVAEKRAAESVYMGSDLYAPGVLK-APGVRR 121
Query: 88 DEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMD 130
+E+ +VS G+ VA +A+M M G+ + R + +
Sbjct: 122 GDEVNVVSPDGQVVAYGVAEMDGLDMVKYRRGLAVRTLRSVYE 164
>gi|289579959|ref|YP_003478425.1| pseudouridylate synthase TruB domain-containing protein [Natrialba
magadii ATCC 43099]
gi|448281196|ref|ZP_21472503.1| H/ACA RNA-protein complex component Cbf5p [Natrialba magadii ATCC
43099]
gi|289529512|gb|ADD03863.1| pseudouridylate synthase TruB domain protein [Natrialba magadii
ATCC 43099]
gi|445579126|gb|ELY33522.1| H/ACA RNA-protein complex component Cbf5p [Natrialba magadii ATCC
43099]
Length = 314
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 7/131 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D SLL ++ P E +L +++
Sbjct: 189 MGHLRRTATSPFDDTD-LYTATEFLDALAFWLEDDDPSLLYDIVDPAERILEEIPHLVID 247
Query: 61 DSAVNAVCYGAQIMLPGVLRY--EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+A V GA + PGV + + +E + + + G AV L +M A +
Sbjct: 248 STAAREVAEGAPVYAPGVRKVVADTALERGDLVACYTQVGSAV--CLGKMVGDPDA--ES 303
Query: 119 GVVAKIKRVIM 129
GVV ++RV++
Sbjct: 304 GVVVDLERVLV 314
>gi|448358841|ref|ZP_21547515.1| H/ACA RNA-protein complex component Cbf5p [Natrialba chahannaoensis
JCM 10990]
gi|445644521|gb|ELY97534.1| H/ACA RNA-protein complex component Cbf5p [Natrialba chahannaoensis
JCM 10990]
Length = 318
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 7/131 (5%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D L T + DA+ + + D SLL ++ P E +L R+++
Sbjct: 193 MGHLRRTATSPFDDTD-LYTATEFLDALAFWLEDDDPSLLYDIVDPAERILEEIPRLVID 251
Query: 61 DSAVNAVCYGAQIMLPGV--LRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDH 118
+A V GA + PGV + + +E + + + G AV L ++ A +
Sbjct: 252 STAAREVAEGAPVYAPGVREVVADTALERGDLVACYTQVGSAV--CLGEVVGDPDA--ES 307
Query: 119 GVVAKIKRVIM 129
GVV ++RV++
Sbjct: 308 GVVVDLERVLV 318
>gi|448734882|ref|ZP_21717102.1| RNA-binding protein [Halococcus salifodinae DSM 8989]
gi|445799512|gb|EMA49891.1| RNA-binding protein [Halococcus salifodinae DSM 8989]
Length = 159
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV-STKGEAVALALAQMTTSTMAT 115
+ + A++ V GA +M PG+ + GIE D+ +VIV G+A+A+ A + S M
Sbjct: 79 VTVDTGAISFVSDGADVMRPGITEADPGIEADQHVVIVEEAHGKALAVGRALVDGSEMTG 138
Query: 116 CDHGVVAKIKRV 127
VVA + V
Sbjct: 139 DSGKVVASVHHV 150
>gi|15668237|ref|NP_247030.1| hypothetical protein MJ_0066 [Methanocaldococcus jannaschii DSM
2661]
gi|2495775|sp|Q60377.1|Y066_METJA RecName: Full=Uncharacterized protein MJ0066
gi|1590856|gb|AAB98046.1| sulfate adenylate transferase, subunit 2 (cysD) [Methanocaldococcus
jannaschii DSM 2661]
Length = 480
Score = 39.3 bits (90), Expect = 0.55, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 71 AQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMD 130
++ PG++ + D IE ++++IV V + LA +++ + + G V K++ I D
Sbjct: 149 GSVLRPGIVEFTDDIEEKDDVIIVDENDRVVGVGLAVVSSEDIKNMEKGKVVKVRFFIKD 208
Query: 131 RDTY 134
+ Y
Sbjct: 209 NEDY 212
>gi|57641250|ref|YP_183728.1| hypothetical protein TK1315 [Thermococcus kodakarensis KOD1]
gi|57159574|dbj|BAD85504.1| 3'-phosphoadenosine 5'-phosphosulfate reductase, fused to
RNA-binding PUA and 4Fe-4S binding domains [Thermococcus
kodakarensis KOD1]
Length = 631
Score = 39.3 bits (90), Expect = 0.56, Method: Composition-based stats.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K I++ AV + GA +M GVL + I + +E+++V+ GE A +A+ +
Sbjct: 133 KWIVVDKGAVGPIKKGANLMAVGVLEADPSIRVGDEVILVTEDGEVFATGIAKKDYDALM 192
Query: 115 TCDHGVVAKIKR 126
+ G K KR
Sbjct: 193 RGERGTGVKPKR 204
>gi|20094206|ref|NP_614053.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19887231|gb|AAM01983.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 356
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 46 PLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALAL 105
P+EG H ++ A +V GA + PGV++ + I + + +VS +G VA
Sbjct: 57 PVEG---NHHVVVADKFAAESVYVGADLYAPGVVQADPDIRRGDRVTVVSERGHPVASGE 113
Query: 106 AQMTTSTMATCDHGVVAKIKRV------IMDRDTYPRKW 138
A + M D G ++ R + + + Y R W
Sbjct: 114 AALQGREMEKRDRGTAVRVDRPTFSAPKVRETEAYRRGW 152
>gi|352681948|ref|YP_004892472.1| tRNA and rRNA cytosine-C5-methylase [Thermoproteus tenax Kra 1]
gi|350274747|emb|CCC81393.1| tRNA and rRNA cytosine-C5-methylase [Thermoproteus tenax Kra 1]
Length = 382
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Query: 32 DQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEI 91
D+H E+L V P + V +R++ + A +V GA + PGVL+ ++ +E+
Sbjct: 69 DEHIGEALWIPVQGPFKVPEV-RRRVVAEKRAAESVYMGADLYAPGVLK-APSVKAGDEV 126
Query: 92 VIVSTKGEAVALALAQMTTSTMATCDHGVVAK 123
+VS G+ VA +A+M M G+ +
Sbjct: 127 NVVSPDGQLVAYGIAEMDGDAMLKTRRGLAVR 158
>gi|347523590|ref|YP_004781160.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460472|gb|AEM38908.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 386
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 34 HKDESLLRRVIRPLEGLLVGH---KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEE 90
++DE L + P+EG KR+++ +V GA + PGV+ E G+ +E
Sbjct: 66 YRDEHLEEAIWFPVEGPFRVPRVDKRVVVDKRTAESVLLGAHVYAPGVIDME-GVSKGDE 124
Query: 91 IVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVIMDRDTYP 135
+ IV+ G VA +A+M+ + G+ RV++ R P
Sbjct: 125 VNIVAENGVVVAYGVAEMSWDEVREKRRGLAV---RVVVSRFRAP 166
>gi|124783623|gb|ABN14933.1| putative centromere/microtubule binding protein [Taenia asiatica]
Length = 253
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 23/29 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMY 29
M ELRR RSG+ +EED +VT+HD+ DA +
Sbjct: 225 MEELRRIRSGVLTEEDNMVTMHDVLDAKW 253
>gi|332159015|ref|YP_004424294.1| hypothetical protein PNA2_1375 [Pyrococcus sp. NA2]
gi|331034478|gb|AEC52290.1| hypothetical protein PNA2_1375 [Pyrococcus sp. NA2]
Length = 172
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALAQMTTSTM 113
+R+++ + AV + GA +M PG++ ++ I E D V+ G +A+ +A M +M
Sbjct: 88 RRVVVDEGAVPHILNGADVMAPGIVDADENIKEGDFVFVVEENYGRPIAIGIALMNGKSM 147
Query: 114 ATCDHGVVAKI 124
D G K+
Sbjct: 148 KERDRGKAVKV 158
>gi|442746681|gb|JAA65500.1| Putative pseudouridine synthase [Ixodes ricinus]
Length = 174
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 14/16 (87%), Positives = 16/16 (100%)
Query: 129 MDRDTYPRKWGLGPKS 144
M+RDTYPRKWGLGPK+
Sbjct: 1 MERDTYPRKWGLGPKA 16
>gi|14521973|ref|NP_127450.1| proliferating-cell nucleolar antigen P120, [Pyrococcus abyssi GE5]
gi|5459193|emb|CAB50679.1| Sun/NOL1/NOP nucleolar protein [Pyrococcus abyssi GE5]
gi|380742614|tpe|CCE71248.1| TPA: proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi GE5]
Length = 385
Score = 38.5 bits (88), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 34/68 (50%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+I A +V GA + PGVLR + GI+ +E+ I +G V + +A+M M
Sbjct: 92 VIANKYAAESVYQGAMLYAPGVLRADKGIKEGDEVQIRDPRGLLVGIGIARMDYKEMIEA 151
Query: 117 DHGVVAKI 124
G+ ++
Sbjct: 152 TRGLAVEV 159
>gi|410670839|ref|YP_006923210.1| hypothetical protein Mpsy_1635 [Methanolobus psychrophilus R15]
gi|409169967|gb|AFV23842.1| hypothetical protein Mpsy_1635 [Methanolobus psychrophilus R15]
Length = 634
Score = 38.5 bits (88), Expect = 0.92, Method: Composition-based stats.
Identities = 18/69 (26%), Positives = 37/69 (53%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+++ A + GA ++ PGV + GI +E+V+++ G+ +A A+M+ + M
Sbjct: 132 VVIDRGAEKFILEGASVLAPGVFDADPGIMETDEVVVLTRDGKLLATGRARMSGARMLEK 191
Query: 117 DHGVVAKIK 125
GV K++
Sbjct: 192 GKGVAVKVR 200
>gi|14520463|ref|NP_125938.1| hypothetical protein PAB0168 [Pyrococcus abyssi GE5]
gi|5457678|emb|CAB49169.1| 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS
reductase), containing one PUA domain and 2 4Fe-4S
binding domains [Pyrococcus abyssi GE5]
gi|380740987|tpe|CCE69621.1| TPA: phosphoadenosine phosphosulfate reductase family protein
[Pyrococcus abyssi GE5]
Length = 632
Score = 38.5 bits (88), Expect = 1.0, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQ 107
K +I+ AV V GA ++ G++ E+ I ++E+++VS GE V + +A+
Sbjct: 135 KWVIIDRGAVEPVKNGANVLPVGIIEAEESIRRNDEVIVVSEDGEVVGVGIAK 187
>gi|147919788|ref|YP_686466.1| hypothetical protein RCIX1979 [Methanocella arvoryzae MRE50]
gi|110621862|emb|CAJ37140.1| putative 3\'-phosphoadenosine 5\'-phosphosulfate sulfotransferase
(PAPS reductase) [Methanocella arvoryzae MRE50]
Length = 627
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 55 KRIILKDSAVNAVCYGAQIML-PGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
K ++ D G+ ML PGV+ ++ I++D+E VIV G VA+ A+MT + M
Sbjct: 123 KGFVIADKGAEKPLLGSSNMLGPGVVGCDESIQIDDE-VIVLVNGRPVAMGRAKMTGADM 181
Query: 114 ATCDHGVVAKIK 125
GV K +
Sbjct: 182 KARKKGVAVKTR 193
>gi|282163308|ref|YP_003355693.1| putative phosphoadenosine phosphosulfate reductase [Methanocella
paludicola SANAE]
gi|282155622|dbj|BAI60710.1| putative phosphoadenosine phosphosulfate reductase [Methanocella
paludicola SANAE]
Length = 632
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 53 GH--KRIILKDSAVNAVCYGAQIML-PGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMT 109
GH K ++ D G+ ML PGV+ ++ I++D+E+V+ +G +A+ A+MT
Sbjct: 126 GHATKGFVIADKGAEKPLLGSSNMLGPGVVDCDENIQVDDEVVVF-LEGRPIAVGRAKMT 184
Query: 110 TSTMATCDHGVVAKIK 125
+ M GV K++
Sbjct: 185 GADMKERKKGVAVKVR 200
>gi|15643619|ref|NP_228665.1| tRNA pseudouridine synthase B [Thermotoga maritima MSB8]
gi|403252597|ref|ZP_10918906.1| tRNA pseudouridine synthase B [Thermotoga sp. EMP]
gi|418044974|ref|ZP_12683070.1| tRNA pseudouridine synthase B [Thermotoga maritima MSB8]
gi|13959605|sp|Q9WZW0.1|TRUB_THEMA RecName: Full=tRNA pseudouridine synthase B; AltName: Full=tRNA
pseudouridine(55) synthase; Short=Psi55 synthase;
AltName: Full=tRNA pseudouridylate synthase; AltName:
Full=tRNA-uridine isomerase
gi|38493003|pdb|1R3E|A Chain A, Crystal Structure Of Trna Pseudouridine Synthase Trub And
Its Rna Complex: Rna-Protein Recognition Through A
Combination Of Rigid Docking And Induced Fit
gi|4981390|gb|AAD35938.1|AE001752_5 tRNA pseudouridine 55 synthase [Thermotoga maritima MSB8]
gi|351678056|gb|EHA61203.1| tRNA pseudouridine synthase B [Thermotoga maritima MSB8]
gi|402812087|gb|EJX26567.1| tRNA pseudouridine synthase B [Thermotoga sp. EMP]
Length = 309
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 HDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRY 81
H I++++ +++ +E + R+I PLE L R+++ + + G+QI L +L+
Sbjct: 199 HTIEESLNVFEAAPEE-IENRII-PLEKCLEWLPRVVVHQESTKMILNGSQIHLE-MLKE 255
Query: 82 EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DG + E + + + +G +ALA A+ +S + T
Sbjct: 256 WDGFKKGEVVRVFNEEGRLLALAEAERNSSFLET 289
>gi|66361482|pdb|1ZE1|A Chain A, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
gi|66361483|pdb|1ZE1|B Chain B, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
gi|66361484|pdb|1ZE1|C Chain C, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
gi|66361485|pdb|1ZE1|D Chain D, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
Length = 309
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 HDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRY 81
H I++++ +++ +E + R+I PLE L R+++ + + G+QI L +L+
Sbjct: 199 HTIEESLNVFEAAPEE-IENRII-PLEKCLEWLPRVVVHQESTKMILNGSQIHLE-MLKE 255
Query: 82 EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DG + E + + + +G +ALA A+ +S + T
Sbjct: 256 WDGFKKGEVVRVFNEEGRLLALAEAERNSSFLET 289
>gi|85544082|pdb|2AB4|A Chain A, Dissecting The Roles Of A Strictly Conserved Tyrosine In
Substrate Recognition And Catalysis By Pseudouridine 55
Synthase
Length = 309
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 HDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRY 81
H I++++ +++ +E + R+I PLE L R+++ + + G+QI L +L+
Sbjct: 199 HTIEESLNVFEAAPEE-IENRII-PLEKCLEWLPRVVVHQESTKMILNGSQIHLE-MLKE 255
Query: 82 EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DG + E + + + +G +ALA A+ +S + T
Sbjct: 256 WDGFKKGEVVRVFNEEGRLLALAEAERNSSFLET 289
>gi|66361486|pdb|1ZE2|A Chain A, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
gi|66361487|pdb|1ZE2|B Chain B, Conformational Change Of Pseudouridine 55 Synthase Upon
Its Association With Rna Substrate
Length = 309
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 22 HDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRY 81
H I++++ +++ +E + R+I PLE L R+++ + + G+QI L +L+
Sbjct: 199 HTIEESLNVFEAAPEE-IENRII-PLEKCLEWLPRVVVHQESTKMILNGSQIHLE-MLKE 255
Query: 82 EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DG + E + + + +G +ALA A+ +S + T
Sbjct: 256 WDGFKKGEVVRVFNEEGRLLALAEAERNSSFLET 289
>gi|83594095|ref|YP_427847.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Rhodospirillum rubrum ATCC 11170]
gi|83577009|gb|ABC23560.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Rhodospirillum rubrum ATCC 11170]
Length = 820
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 6 RNRSGIQSEEDGLVTLHDIKDAMY--LYDQHKDESLLRRVIRPL----EGLLVGHKRII- 58
RNR + E D V + DA Y L D+ +L R V +P+ G +VGH+ +
Sbjct: 532 RNRVHLFEEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGHETLAR 591
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEA-----VALALAQMTTSTM 113
L D A A+ +++P R+ +E+D +I++ T+ A + S
Sbjct: 592 LHDPA--AIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQ 649
Query: 114 ATCDHGVVAKIKRVIMDRDTYPR 136
+ D + + ++R+I R P+
Sbjct: 650 SVGDGRIFSAVRRLIATRRLPPQ 672
>gi|14590194|ref|NP_142259.1| hypothetical protein PH0268 [Pyrococcus horikoshii OT3]
gi|3256657|dbj|BAA29340.1| 630aa long hypothetical protein [Pyrococcus horikoshii OT3]
Length = 630
Score = 37.7 bits (86), Expect = 1.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQ 107
K +I+ AV V GA ++ GV+ E+ I +E+++VS GE V + +A+
Sbjct: 135 KWVIIDRGAVEPVKNGANVLPVGVIEAEESIRRGDEVIVVSEDGEVVGVGIAK 187
>gi|448538711|ref|ZP_21622957.1| PUA domain containing protein [Halorubrum hochstenium ATCC 700873]
gi|445700577|gb|ELZ52569.1| PUA domain containing protein [Halorubrum hochstenium ATCC 700873]
Length = 596
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 24/82 (29%), Positives = 42/82 (51%), Gaps = 7/82 (8%)
Query: 51 LVGHKRIILKDSA-----VNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALAL 105
L G +R + D+ ++A ++ PGV+ +DGI + +E+VI K A A+
Sbjct: 514 LAGARRWVESDAPTKRVEIDAFVPHGSVLAPGVVDADDGIRVGDEVVIEGPK--AFAVGR 571
Query: 106 AQMTTSTMATCDHGVVAKIKRV 127
A+M+ MA GV +++ V
Sbjct: 572 AEMSGPEMAGSTRGVAVQVRHV 593
>gi|223478509|ref|YP_002582934.1| phosphoadenosine phosphosulfate reductase family protein
[Thermococcus sp. AM4]
gi|214033735|gb|EEB74561.1| Phosphoadenosine phosphosulfate reductase family protein
[Thermococcus sp. AM4]
Length = 631
Score = 37.7 bits (86), Expect = 1.6, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 37/72 (51%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMA 114
K +I+ AV + GA ++ GVL + I +++++++VS GE A +A+ +
Sbjct: 133 KWVIVDKGAVEPIKNGANLLAVGVLDADPSIRVNDDVILVSEDGEVFATGIAKKDYEALI 192
Query: 115 TCDHGVVAKIKR 126
+ G K KR
Sbjct: 193 RGERGTGVKPKR 204
>gi|386350847|ref|YP_006049095.1| PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
[Rhodospirillum rubrum F11]
gi|346719283|gb|AEO49298.1| diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
[Rhodospirillum rubrum F11]
Length = 813
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 64/143 (44%), Gaps = 14/143 (9%)
Query: 6 RNRSGIQSEEDGLVTLHDIKDAMY--LYDQHKDESLLRRVIRPL----EGLLVGHKRII- 58
RNR + E D V + DA Y L D+ +L R V +P+ G +VGH+ +
Sbjct: 525 RNRVHLFEEGDLEVRARVVADAGYSKLIDRGLRNNLFRPVFQPIIDVTSGAVVGHETLAR 584
Query: 59 LKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEA-----VALALAQMTTSTM 113
L D A A+ +++P R+ +E+D +I++ T+ A + S
Sbjct: 585 LHDPA--AIGLTMDVLIPVAERFGLAVEIDRQIILAVTEALAEDAGWLEGGFLSFNLSAQ 642
Query: 114 ATCDHGVVAKIKRVIMDRDTYPR 136
+ D + + ++R+I R P+
Sbjct: 643 SVGDGRIFSAVRRLIATRRLPPQ 665
>gi|14601183|ref|NP_147715.1| RNA (cytosine-C(5)-)-methyltransferase [Aeropyrum pernix K1]
gi|5104768|dbj|BAA80083.1| RNA (cytosine-C(5)-)-methyltransferase [Aeropyrum pernix K1]
Length = 388
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 36 DESLLRRVIRPLEGLLVGH---KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIV 92
DE + + P+EG KR++ A +V G+ + PGV+ Y G+E +E+V
Sbjct: 71 DEDIPEAIWHPVEGPFSWEFRGKRVVADKVASESVLMGSDLYAPGVV-YARGVERGDEVV 129
Query: 93 IVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRVI 128
IV+ G V +A M+ M G+ ++ + I
Sbjct: 130 IVAPNGRVVGGGVAVMSWREMRRAGRGLAVRVTKPI 165
>gi|337285025|ref|YP_004624499.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus yayanosii
CH1]
gi|334900959|gb|AEH25227.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus yayanosii
CH1]
Length = 384
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+++ A +V GA + PGVL+ + GI+ +E+ I +G V + +A+M M
Sbjct: 91 VVVNKYAAESVYQGAMLYAPGVLKADKGIKEGDEVQIRDPRGLLVGIGIARMDYREMVMA 150
Query: 117 DHGVVAKI 124
G+ ++
Sbjct: 151 TRGLAVEV 158
>gi|125549421|gb|EAY95243.1| hypothetical protein OsI_17062 [Oryza sativa Indica Group]
Length = 288
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDA 27
M EL R RSGI E+D +VT+HD+ DA
Sbjct: 233 MQELHRVRSGIHGEQDNMVTMHDVMDA 259
>gi|297603219|ref|NP_001053623.2| Os04g0576300 [Oryza sativa Japonica Group]
gi|255675709|dbj|BAF15537.2| Os04g0576300, partial [Oryza sativa Japonica Group]
Length = 198
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDA 27
M EL R RSGI E+D +VT+HD+ DA
Sbjct: 171 MQELHRVRSGIHGEQDNMVTMHDVMDA 197
>gi|322372228|ref|ZP_08046769.1| tRNA-guanine transglycosylase, various specificities [Haladaptatus
paucihalophilus DX253]
gi|320548237|gb|EFW89910.1| tRNA-guanine transglycosylase, various specificities [Haladaptatus
paucihalophilus DX253]
Length = 583
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 47 LEGLLVGHKRIILKDSAV-----NAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAV 101
L L G +R + D+ V +A ++ PGV+ +D I +E+VI K A
Sbjct: 497 LSFTLAGARRWVESDAPVKRVEIDAFAPHGSVLAPGVVDADDDIRPGDEVVIEGPK--AF 554
Query: 102 ALALAQMTTSTMATCDHGVVAKIKRV 127
A+ A+M+ MA G+ +++ V
Sbjct: 555 AIGRAEMSGPEMAESTRGIATEVRHV 580
>gi|281411514|ref|YP_003345593.1| tRNA pseudouridine synthase B [Thermotoga naphthophila RKU-10]
gi|281372617|gb|ADA66179.1| tRNA pseudouridine synthase B [Thermotoga naphthophila RKU-10]
Length = 309
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 22 HDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRY 81
+ I++++ +++ +E + R+I PLE L R+++ + + G+QI L +L+
Sbjct: 199 YTIEESLNVFEAAPEE-IENRII-PLEKCLEWLPRVVVHQESTKTILNGSQIHLE-MLKE 255
Query: 82 EDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
DG + E + + + +G+ +ALA A+ +S + T
Sbjct: 256 WDGFKKGEVVRVFNEEGQLLALAEAERNSSFLET 289
>gi|18977487|ref|NP_578844.1| RNA-binding protein [Pyrococcus furiosus DSM 3638]
gi|397651617|ref|YP_006492198.1| RNA-binding protein [Pyrococcus furiosus COM1]
gi|18893188|gb|AAL81239.1| hypothetical protein PF1115 [Pyrococcus furiosus DSM 3638]
gi|393189208|gb|AFN03906.1| RNA-binding protein [Pyrococcus furiosus COM1]
Length = 172
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALAQMTTSTM 113
KR+++ + AV + GA +M PG++ ++ I E D V+ G +A+ +A M+ M
Sbjct: 88 KRVVVDEGAVPHILNGADVMAPGIVDADENIKEGDFVFVVEENYGRPLAIGIALMSGKAM 147
Query: 114 ATCDHGVVAKI 124
+ G K+
Sbjct: 148 KEKNRGKAVKV 158
>gi|222629409|gb|EEE61541.1| hypothetical protein OsJ_15862 [Oryza sativa Japonica Group]
Length = 347
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDA 27
M EL R RSGI E+D +VT+HD+ DA
Sbjct: 292 MQELHRVRSGIHGEQDNMVTMHDVMDA 318
>gi|448377694|ref|ZP_21560390.1| H/ACA RNA-protein complex component Cbf5p [Halovivax asiaticus JCM
14624]
gi|445655638|gb|ELZ08483.1| H/ACA RNA-protein complex component Cbf5p [Halovivax asiaticus JCM
14624]
Length = 312
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M +LRR + + D LV D+ DA+ + + D LR ++ P E +L + +
Sbjct: 178 MGDLRRTATDPFDDRD-LVNATDLIDALAFWIEDDDTDPLRSMVDPAERILSDLPAVTIA 236
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC---- 116
++A V GA + PGVL DG++ + G A +A T + A C
Sbjct: 237 ENAAAEVANGAPVYAPGVLDV-DGVDSGRD--GADGDGPADTPLVACYTPNGSAVCLGKL 293
Query: 117 ------DHGVVAKIKRVIM 129
D G V ++RV++
Sbjct: 294 VGDPDADSGTVVDLERVLV 312
>gi|312137275|ref|YP_004004612.1| tRNA-archaeosine synthase [Methanothermus fervidus DSM 2088]
gi|311224994|gb|ADP77850.1| tRNA-archaeosine synthase [Methanothermus fervidus DSM 2088]
Length = 302
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 72 QIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKRV 127
+I PGV+ ++ I +E VIV+ KG+ V + A ++ + M D+GV KI+R+
Sbjct: 246 KIFAPGVIEADESIVPRDE-VIVTYKGDIVGVGKAVLSGNEMVKADYGVAVKIRRL 300
>gi|389852175|ref|YP_006354409.1| RNA-binding protein [Pyrococcus sp. ST04]
gi|388249481|gb|AFK22334.1| putative RNA-binding protein [Pyrococcus sp. ST04]
Length = 172
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALAQMTTSTM 113
+R+++ + AV + GA +M PG++ ++ I E D +I G +A+ +A M+ M
Sbjct: 88 RRVVVDEGAVPHILNGADVMAPGIVDADENIKEGDFVFIIEENYGRPLAIGIALMSGKAM 147
Query: 114 ATCDHGVVAKI 124
+ G K+
Sbjct: 148 KEKNRGKAVKV 158
>gi|374325533|ref|YP_005083730.1| hypothetical protein P186_0008 [Pyrobaculum sp. 1860]
gi|356640799|gb|AET31478.1| hypothetical protein P186_0008 [Pyrobaculum sp. 1860]
Length = 172
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/76 (26%), Positives = 37/76 (48%)
Query: 46 PLEGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALAL 105
P LL + ++ AV + GA +M PG+ + E + + +V KG A+A+A+
Sbjct: 74 PKGALLPPLPKAVVDAGAVKRIIDGADVMRPGIKKLEGEFNKGDTVFVVDEKGRAIAIAV 133
Query: 106 AQMTTSTMATCDHGVV 121
A ++ + + G V
Sbjct: 134 ALHSSEEIQQMEKGKV 149
>gi|448731168|ref|ZP_21713471.1| RNA-binding protein [Halococcus saccharolyticus DSM 5350]
gi|445792762|gb|EMA43363.1| RNA-binding protein [Halococcus saccharolyticus DSM 5350]
Length = 159
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV-STKGEAVALALAQMTTSTMAT 115
+ + A++ V GA +M PG+ + GIE ++ +VIV G+A+A+ A + + M
Sbjct: 79 VTVDTGAISFVSDGADVMRPGITEADPGIEANQHVVIVEEAHGKALAIGRALVDGTEMDG 138
Query: 116 CDHGVVAKIKRV 127
VVA + V
Sbjct: 139 DSGKVVASVHHV 150
>gi|332158464|ref|YP_004423743.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. NA2]
gi|331033927|gb|AEC51739.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. NA2]
Length = 388
Score = 36.2 bits (82), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
++ A +V GA + PGVL+ + GI+ +E+ I +G V + +A+M M
Sbjct: 94 VVANKYAAESVYQGAMLYAPGVLKADKGIKEGDEVQIRDPRGLLVGIGIARMDYREMIEA 153
Query: 117 DHGVVAKI 124
G+ ++
Sbjct: 154 TKGLAVEV 161
>gi|307354785|ref|YP_003895836.1| PUA domain-containing protein [Methanoplanus petrolearius DSM
11571]
gi|307158018|gb|ADN37398.1| PUA domain containing protein [Methanoplanus petrolearius DSM
11571]
Length = 165
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 12 QSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILKDSAVNAVCYGA 71
+++ D ++ L + K A+ D +L V P E ++ ++ AV + GA
Sbjct: 44 ETDSDFMIYLVNRKPAIMERDGWVFPTLRAFVETPFE-----VRKAVVDSGAVAFMAKGA 98
Query: 72 QIMLPGVLRYEDGIEMDEEIVIVSTK-GEAVALALAQMTTSTMATCDHGVVAK 123
+M PG++ I VIV K G+ +A+A+A M + + D G +AK
Sbjct: 99 DLMRPGIVSLTGDIREGRPFVIVEEKHGKPLAIAVALMDSEGILASDKGKIAK 151
>gi|390939060|ref|YP_006402798.1| PUA domain containing protein [Desulfurococcus fermentans DSM
16532]
gi|390192167|gb|AFL67223.1| PUA domain containing protein [Desulfurococcus fermentans DSM
16532]
Length = 175
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
R+ +KD + V G + VL + GI+ ++E+++ S+ GE +A+ A + M
Sbjct: 101 RVYIKDEYIEFVARGGNLFNKHVLMADPGIKPNDEVLVTSSNGELIAVGRAIIPGFEMVY 160
Query: 116 CDHGVVAKIK 125
G +++
Sbjct: 161 YKRGEAVRVR 170
>gi|347522770|ref|YP_004780340.1| PUA domain containing protein [Pyrolobus fumarii 1A]
gi|343459652|gb|AEM38088.1| PUA domain containing protein [Pyrolobus fumarii 1A]
Length = 163
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV-STKGEAVALALAQMTTSTMA 114
RII+ + AV + GA +M PG++ E + +VI+ K +A+ A + +S +A
Sbjct: 79 RIIVDEGAVRPLTRGANLMRPGIVSVEGEFNRGDIVVILEPVKRIPIAVHEALVDSSEVA 138
Query: 115 TCDHGVVAK 123
+ GVV+K
Sbjct: 139 NMERGVVSK 147
>gi|14521517|ref|NP_126993.1| RNA-binding protein [Pyrococcus abyssi GE5]
gi|5458736|emb|CAB50223.1| RNA binding protein, containing PUA domain [Pyrococcus abyssi GE5]
gi|380742125|tpe|CCE70759.1| TPA: RNA-binding protein [Pyrococcus abyssi GE5]
Length = 172
Score = 36.2 bits (82), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTK-GEAVALALAQMTTSTM 113
+R+++ + AV + GA +M PG++ ++ I+ + + +V K G +A+ +A M+ M
Sbjct: 88 RRVVVDEGAVPHILNGADVMAPGIVDADENIKEGDFVFVVEEKYGRPLAIGVALMSGKAM 147
Query: 114 ATCDHGVVAKI 124
G K+
Sbjct: 148 KEKSRGKAVKV 158
>gi|448386302|ref|ZP_21564428.1| RNA-binding protein [Haloterrigena thermotolerans DSM 11522]
gi|445655253|gb|ELZ08099.1| RNA-binding protein [Haloterrigena thermotolerans DSM 11522]
Length = 159
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 55 KRIILKDS-AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV-STKGEAVALALAQMTTST 112
KR++ D+ AV+ V GA +M PG+ D I D+ +VI + G+ +A+ A++ S
Sbjct: 76 KRLVTVDAGAVSFVSDGADVMRPGITEATDDISPDDLVVIAEESHGKVLAVGRARVDGSE 135
Query: 113 MATCDHGVVAKIKRV 127
MA + VV + V
Sbjct: 136 MAGNEGKVVDSLHHV 150
>gi|444728353|gb|ELW68811.1| Centromere/microtubule-binding protein CBF5 [Tupaia chinensis]
Length = 85
Score = 35.8 bits (81), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLL 40
M EL+R RS + SE+D V+++D D + YD H+++S L
Sbjct: 13 MKELQRVRSRVMSEKDYKVSVYDRLDTQWPYDNHRNDSYL 52
>gi|389851763|ref|YP_006353997.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. ST04]
gi|388249069|gb|AFK21922.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus sp. ST04]
Length = 385
Score = 35.8 bits (81), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 34/68 (50%)
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATC 116
+ + A +V GA + PGVL+ + GI+ +E+ I +G V + +A+M M
Sbjct: 92 VTVNKFAAESVYQGAMLYAPGVLKADKGIKEGDEVQIRDPRGLLVGIGIARMDYREMIEA 151
Query: 117 DHGVVAKI 124
G+ ++
Sbjct: 152 TRGLAVEV 159
>gi|355570961|ref|ZP_09042231.1| phosphoadenosine phosphosulfate reductase [Methanolinea tarda
NOBI-1]
gi|354826243|gb|EHF10459.1| phosphoadenosine phosphosulfate reductase [Methanolinea tarda
NOBI-1]
Length = 470
Score = 35.8 bits (81), Expect = 5.4, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 31/56 (55%)
Query: 71 AQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKR 126
A ++ PG++ E + +E+ ++ KGE +A+ A++ + + G+V + +R
Sbjct: 141 ASLLAPGLVTIEPSVRKGDEVFVLDEKGECIAVGRARVDADAAGSMERGLVVRTRR 196
>gi|218884567|ref|YP_002428949.1| Prefoldin, molecular chaperone implicated in de novo protein
folding subunit alpha [Desulfurococcus kamchatkensis
1221n]
gi|218766183|gb|ACL11582.1| Prefoldin, molecular chaperone implicated in de novo protein
folding, alpha subunit [Desulfurococcus kamchatkensis
1221n]
Length = 163
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 35/70 (50%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
R+ +KD + V G + VL + GI+ ++E+++ S+ GE +A+ A + M
Sbjct: 89 RVYIKDEYIEFVAGGGNLFNKHVLMADPGIKPNDEVLVTSSNGELIAVGRAIIPGFEMVY 148
Query: 116 CDHGVVAKIK 125
G +++
Sbjct: 149 YKRGEAVRVR 158
>gi|315230976|ref|YP_004071412.1| PUA-PAPS reductase like fusion [Thermococcus barophilus MP]
gi|315184004|gb|ADT84189.1| PUA-PAPS reductase like fusion [Thermococcus barophilus MP]
Length = 630
Score = 35.8 bits (81), Expect = 6.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 33/53 (62%)
Query: 55 KRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQ 107
K +++ + AV + GA ++ G++ + I++ ++++IVS GE +A +A+
Sbjct: 134 KWVVVDEGAVEPIKKGANVLPVGIIEADPSIKIGDDVIIVSESGEVIATGIAK 186
>gi|379005444|ref|YP_005261116.1| tRNA and rRNA cytosine-C5-methylase [Pyrobaculum oguniense TE7]
gi|375160897|gb|AFA40509.1| tRNA and rRNA cytosine-C5-methylase [Pyrobaculum oguniense TE7]
Length = 377
Score = 35.4 bits (80), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 34 HKDESLLRRVIRPLEGLL--VGHKRIILKDS-AVNAVCYGAQIMLPGVLRYEDGIEMDEE 90
+KDE V P+EG K+I++ D A ++ GA + P +++ D ++ EE
Sbjct: 65 YKDEVFEDAVWFPVEGPFKIPSAKKIVVVDKKAAESIMLGADLYGPAIIK-TDPVKSGEE 123
Query: 91 IVIVSTKGEAVALALAQMTTSTMATCDHGVVAKIKR 126
+ IVS G VA A M + G+ K+++
Sbjct: 124 VNIVSDNGVLVAYGKAVMNSDEALRSRRGLFVKVEK 159
>gi|448623416|ref|ZP_21669959.1| H/ACA RNA-protein complex component Cbf5p [Haloferax denitrificans
ATCC 35960]
gi|445752818|gb|EMA04240.1| H/ACA RNA-protein complex component Cbf5p [Haloferax denitrificans
ATCC 35960]
Length = 289
Score = 35.4 bits (80), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M LRR + + D LVTLHD+ DA+ + DES LR V+ E L + +
Sbjct: 167 MGHLRRTATDPFDDAD-LVTLHDLADALAFAAE-GDESWLRDVVSSAERALSHLPSVTIA 224
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
+SA V GA + PGV + + + + G AV L ++ A D G
Sbjct: 225 NSAAREVANGAPVYAPGVFDVDADAARGDLVACFTDDGSAV--CLGELVGD--ADADSGT 280
Query: 121 VAKIKRVIM 129
V ++ V++
Sbjct: 281 VVSLEAVLV 289
>gi|303389431|ref|XP_003072948.1| RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
gi|303302091|gb|ADM11588.1| RNA-binding protein [Encephalitozoon intestinalis ATCC 50506]
Length = 169
Score = 35.4 bits (80), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMY----LYDQHKDESLLRRVIRPLEGLLVGHKR 56
M+ RNR+ + S E GL L + ++H +E
Sbjct: 40 MLHKCRNRASVISRE-GLAILFCFNKKYFPTIQYLEKHSNEEF---------------HE 83
Query: 57 IILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEE---IVIVSTKGEA-VALALAQMTTST 112
+ L D A+ + GA +M+PG+L+Y+D ++ D E V++ G++ V + A ++
Sbjct: 84 VFLDDGALGPLSRGADVMIPGILKYKDLVKGDFEEGDSVVIRILGKSIVGIGEAVVSFKD 143
Query: 113 MATCDHGVVAKIKRVIMD 130
MA +G+ ++ I D
Sbjct: 144 MAKKGNGIGIEVYHRIGD 161
>gi|88603521|ref|YP_503699.1| hypothetical protein Mhun_2275 [Methanospirillum hungatei JF-1]
gi|88188983|gb|ABD41980.1| Uncharacterized domain 2 [Methanospirillum hungatei JF-1]
Length = 152
Score = 35.4 bits (80), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/73 (21%), Positives = 36/73 (49%)
Query: 56 RIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMAT 115
R+ L++ VN + G + V + GI +E++++ G +A+ A ++ + M
Sbjct: 76 RVELREDVVNFIAAGKNLFCRHVTDADPGIHAGDEVIVIDGDGRFIAIGEAVVSGTEMMA 135
Query: 116 CDHGVVAKIKRVI 128
C+ G+ ++ I
Sbjct: 136 CETGMAVSVRHGI 148
>gi|448300072|ref|ZP_21490076.1| RNA-binding protein [Natronorubrum tibetense GA33]
gi|445586419|gb|ELY40699.1| RNA-binding protein [Natronorubrum tibetense GA33]
Length = 159
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Query: 55 KRIILKDS-AVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIV-STKGEAVALALAQMTTST 112
K+++ DS A++ V GA +M PG+ D IE D+ +VI + G+ +A+ A++ S
Sbjct: 76 KQLVTVDSGAISFVSDGADVMRPGITEATDDIEPDDLVVIAEESHGKVLAVGRARVEGSD 135
Query: 113 MATCDHGVVAKIKRV 127
M + V+ + V
Sbjct: 136 MVGSEGKVIDSLHHV 150
>gi|20092679|ref|NP_618754.1| putative RNA-binding protein [Methanosarcina acetivorans C2A]
gi|19917965|gb|AAM07234.1| conserved hypothetical protein [Methanosarcina acetivorans C2A]
Length = 161
Score = 35.0 bits (79), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Query: 54 HKRIILKDS-AVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALAQMTTS 111
KR+++ D A+ V GA IM PG+L + I E D I++ T +A+A+ A M
Sbjct: 76 QKRLVVVDKGAIQFVSNGADIMAPGILEADPEIKEGDLVIIVEETHRKALAIGKALMEGQ 135
Query: 112 TMATCDHG 119
M D G
Sbjct: 136 QMVDADSG 143
>gi|307595137|ref|YP_003901454.1| PUA domain containing protein [Vulcanisaeta distributa DSM 14429]
gi|307550338|gb|ADN50403.1| PUA domain containing protein [Vulcanisaeta distributa DSM 14429]
Length = 173
Score = 35.0 bits (79), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%)
Query: 54 HKRIILKDSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTM 113
+ + + D AV + GA +M PG+ + + ++I KG +A+ ++ MT M
Sbjct: 84 YPTVTVDDGAVPHIVNGADVMRPGIKEISGNFGVGDVLLIKDLKGRYIAIGVSLMTADEM 143
Query: 114 ATCDHGVVAKI 124
+ G V K+
Sbjct: 144 RSTSKGKVIKV 154
>gi|315231051|ref|YP_004071487.1| hypothetical protein TERMP_01289 [Thermococcus barophilus MP]
gi|315184079|gb|ADT84264.1| hypothetical protein TERMP_01289 [Thermococcus barophilus MP]
Length = 172
Score = 35.0 bits (79), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%)
Query: 48 EGLLVGHKRIILKDSAVNAVCYGAQIMLPGVLRYEDGI-EMDEEIVIVSTKGEAVALALA 106
E L +R+++ + AV + GA +M PG++ ++ I E D V+ G +A+ +A
Sbjct: 80 EDLRKWKRRVVVDEGAVPFILKGADVMAPGIVDADEDIKEGDFVFVVEENYGRPLAIGIA 139
Query: 107 QMTTSTMATCDHGVVAKI 124
M+ M + G K+
Sbjct: 140 LMSGRDMKEKNRGKAVKV 157
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.137 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,081,156,779
Number of Sequences: 23463169
Number of extensions: 72092662
Number of successful extensions: 176817
Number of sequences better than 100.0: 860
Number of HSP's better than 100.0 without gapping: 776
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 175904
Number of HSP's gapped (non-prelim): 862
length of query: 144
length of database: 8,064,228,071
effective HSP length: 108
effective length of query: 36
effective length of database: 9,825,173,115
effective search space: 353706232140
effective search space used: 353706232140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)