Your job contains 1 sequence.
>psy1178
MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK
DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV
VAKIKRVIMDRDTYPRKWGLGPKS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1178
(144 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0259937 - symbol:Nop60B "Nucleolar protein at 60B"... 621 1.2e-60 1
UNIPROTKB|E2R6Q8 - symbol:DKC1 "Uncharacterized protein" ... 577 5.3e-56 1
UNIPROTKB|F6XRK3 - symbol:DKC1 "Uncharacterized protein" ... 577 5.3e-56 1
UNIPROTKB|A7YWH5 - symbol:DKC1 "Uncharacterized protein" ... 574 1.1e-55 1
UNIPROTKB|H7C2Q2 - symbol:DKC1 "H/ACA ribonucleoprotein c... 574 1.1e-55 1
UNIPROTKB|O60832 - symbol:DKC1 "H/ACA ribonucleoprotein c... 574 1.1e-55 1
UNIPROTKB|F1RZ24 - symbol:DKC1 "Uncharacterized protein" ... 574 1.1e-55 1
MGI|MGI:1861727 - symbol:Dkc1 "dyskeratosis congenita 1, ... 571 2.3e-55 1
RGD|621780 - symbol:Dkc1 "dyskeratosis congenita 1, dyske... 565 9.9e-55 1
UNIPROTKB|F1P0Q8 - symbol:DKC1 "H/ACA ribonucleoprotein c... 557 7.0e-54 1
UNIPROTKB|Q5ZJH9 - symbol:DKC1 "H/ACA ribonucleoprotein c... 555 1.1e-53 1
ZFIN|ZDB-GENE-031118-120 - symbol:dkc1 "dyskeratosis cong... 544 1.7e-52 1
DICTYBASE|DDB_G0281933 - symbol:nola4 "H/ACA RNP complex ... 543 2.1e-52 1
POMBASE|SPAC29A4.04c - symbol:cbf5 "pseudouridylate synth... 540 4.4e-52 1
CGD|CAL0001653 - symbol:orf19.1833 species:5476 "Candida ... 529 6.5e-51 1
TAIR|locus:2080625 - symbol:NAP57 "homologue of NAP57" sp... 523 2.8e-50 1
ASPGD|ASPL0000074111 - symbol:swoC species:162425 "Emeric... 521 4.6e-50 1
SGD|S000004165 - symbol:CBF5 "Pseudouridine synthase cata... 521 4.6e-50 1
WB|WBGene00010478 - symbol:K01G5.5 species:6239 "Caenorha... 513 3.2e-49 1
UNIPROTKB|E2RGN8 - symbol:E2RGN8 "Uncharacterized protein... 498 1.2e-47 1
UNIPROTKB|G4N1Q3 - symbol:MGG_07518 "Centromere/microtubu... 480 1.0e-45 1
GENEDB_PFALCIPARUM|PF14_0174 - symbol:PF14_0174 "small nu... 461 1.0e-43 1
UNIPROTKB|Q8ILS0 - symbol:PF14_0174 "Pseudouridine syntha... 461 1.0e-43 1
UNIPROTKB|C9IYT0 - symbol:DKC1 "H/ACA ribonucleoprotein c... 149 2.0e-10 1
>FB|FBgn0259937 [details] [associations]
symbol:Nop60B "Nucleolar protein at 60B" species:7227
"Drosophila melanogaster" [GO:0005730 "nucleolus"
evidence=ISS;NAS;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IMP] [GO:0006364 "rRNA processing" evidence=NAS;IMP]
[GO:0001522 "pseudouridine synthesis" evidence=IMP] [GO:0005634
"nucleus" evidence=NAS] [GO:0004730 "pseudouridylate synthase
activity" evidence=ISS] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0035220 "wing
disc development" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 EMBL:AE013599 GO:GO:0005730
GO:GO:0022008 GO:GO:0003723 GO:GO:0035220 GO:GO:0030529
GO:GO:0007281 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0006364
eggNOG:COG0130 KO:K11131 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 GeneTree:ENSGT00510000047092 EMBL:AF017230
EMBL:AF089837 EMBL:AF097634 EMBL:DQ841550 EMBL:DQ857345
EMBL:DQ857346 EMBL:AY089408 EMBL:BT030987 RefSeq:NP_001014547.1
RefSeq:NP_001163286.1 RefSeq:NP_001163287.1 RefSeq:NP_001163288.1
RefSeq:NP_001163289.1 RefSeq:NP_525120.1 UniGene:Dm.1944
ProteinModelPortal:O44081 SMR:O44081 DIP:DIP-20128N IntAct:O44081
MINT:MINT-1030866 STRING:O44081 PaxDb:O44081 PRIDE:O44081
EnsemblMetazoa:FBtr0072258 EnsemblMetazoa:FBtr0100213
EnsemblMetazoa:FBtr0300227 EnsemblMetazoa:FBtr0300228
EnsemblMetazoa:FBtr0300229 EnsemblMetazoa:FBtr0300861 GeneID:37873
KEGG:dme:Dmel_CG3333 CTD:37873 FlyBase:FBgn0259937
InParanoid:O44081 OMA:LKSEWIV OrthoDB:EOG4WSTRZ PhylomeDB:O44081
ChiTaRS:Nop60B GenomeRNAi:37873 NextBio:805804 Bgee:O44081
GermOnline:CG3333 Uniprot:O44081
Length = 508
Score = 621 (223.7 bits), Expect = 1.2e-60, P = 1.2e-60
Identities = 115/144 (79%), Positives = 135/144 (93%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M+ELRR RSGIQSE DG+VT+HD+ DAM+LY+ HKDES+LRRVI+PLEGLLV HKRII+K
Sbjct: 241 MLELRRVRSGIQSERDGMVTMHDVLDAMWLYENHKDESMLRRVIKPLEGLLVNHKRIIMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS+VNAVCYGA+I LPGVLRYEDGIE+D+EIVI +TKGEA+ LA+A MTT+TMA+CDHGV
Sbjct: 301 DSSVNAVCYGAKITLPGVLRYEDGIEIDQEIVICTTKGEAICLAIALMTTATMASCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>UNIPROTKB|E2R6Q8 [details] [associations]
symbol:DKC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0003723 GO:GO:0006396 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127
Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451
Ensembl:ENSCAFT00000031188 Uniprot:E2R6Q8
Length = 464
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++EEIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNEEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>UNIPROTKB|F6XRK3 [details] [associations]
symbol:DKC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0003723 GO:GO:0006396 InterPro:IPR015947 SUPFAM:SSF88697
KO:K11131 OMA:TIHESKL GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GeneTree:ENSGT00510000047092
CTD:1736 Ensembl:ENSCAFT00000031188 EMBL:AAEX03027096
RefSeq:XP_549382.2 GeneID:492263 KEGG:cfa:492263 Uniprot:F6XRK3
Length = 517
Score = 577 (208.2 bits), Expect = 5.3e-56, P = 5.3e-56
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++EEIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNEEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>UNIPROTKB|A7YWH5 [details] [associations]
symbol:DKC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005697
"telomerase holoenzyme complex" evidence=IEA] [GO:0003720
"telomerase activity" evidence=IEA] [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR015947 SUPFAM:SSF88697 eggNOG:COG0130
HOGENOM:HOG000231224 KO:K11131 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GeneTree:ENSGT00510000047092
OMA:SHEPSAD CTD:1736 HOVERGEN:HBG081442 OrthoDB:EOG4NS3BP
GO:GO:0005697 GO:GO:0003720 EMBL:DAAA02070028 EMBL:BC134581
IPI:IPI00705162 RefSeq:NP_001098865.1 UniGene:Bt.12564
STRING:A7YWH5 Ensembl:ENSBTAT00000017339 GeneID:525619
KEGG:bta:525619 InParanoid:A7YWH5 NextBio:20874200 Uniprot:A7YWH5
Length = 506
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>UNIPROTKB|H7C2Q2 [details] [associations]
symbol:DKC1 "H/ACA ribonucleoprotein complex subunit 4"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] InterPro:IPR002478 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 PROSITE:PS50890
SMART:SM00359 GO:GO:0003723 GO:GO:0006396 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0009982 GO:GO:0001522 PANTHER:PTHR23127
SUPFAM:SSF55120 TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 EMBL:AC109993
HGNC:HGNC:2890 ChiTaRS:DKC1 ProteinModelPortal:H7C2Q2
Ensembl:ENST00000426673 Uniprot:H7C2Q2
Length = 208
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 31 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 90
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 91 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 150
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 151 VAKIKRVIMERDTYPRKWGLGPKA 174
>UNIPROTKB|O60832 [details] [associations]
symbol:DKC1 "H/ACA ribonucleoprotein complex subunit 4"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA] [GO:0003720
"telomerase activity" evidence=IDA] [GO:0005697 "telomerase
holoenzyme complex" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008283 "cell proliferation" evidence=TAS] [GO:0000723
"telomere maintenance" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007004 "telomere maintenance via telomerase"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0005737 Pathway_Interaction_DB:telomerasepathway
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0008283
GO:GO:0003723 GO:GO:0015030 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0007004 GO:GO:0006364 eggNOG:COG0130 HOGENOM:HOG000231224
KO:K11131 OMA:TIHESKL GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 MIM:300240 CTD:1736
HOVERGEN:HBG081442 OrthoDB:EOG4NS3BP GO:GO:0005697 GO:GO:0003720
EMBL:AJ224481 EMBL:AJ010395 EMBL:AJ010396 EMBL:AF067008
EMBL:AF067023 EMBL:AF067009 EMBL:AF067010 EMBL:AF067011
EMBL:AF067012 EMBL:AF067013 EMBL:AF067014 EMBL:AF067015
EMBL:AF067016 EMBL:AF067017 EMBL:AF067018 EMBL:AF067019
EMBL:AF067020 EMBL:AF067021 EMBL:AF067022 EMBL:U59151 EMBL:JF279874
EMBL:AC109993 EMBL:BC009928 EMBL:BC010015 IPI:IPI00221394
RefSeq:NP_001354.1 UniGene:Hs.4747 ProteinModelPortal:O60832
SMR:O60832 IntAct:O60832 MINT:MINT-1379892 STRING:O60832
PhosphoSite:O60832 SWISS-2DPAGE:O60832 PaxDb:O60832
PeptideAtlas:O60832 PRIDE:O60832 DNASU:1736 Ensembl:ENST00000369550
GeneID:1736 KEGG:hsa:1736 UCSC:uc004fmm.3 GeneCards:GC0XP153984
HGNC:HGNC:2890 HPA:HPA000166 HPA:HPA000447 MIM:300126 MIM:305000
neXtProt:NX_O60832 Orphanet:1775 Orphanet:3322 PharmGKB:PA27344
PhylomeDB:O60832 ChiTaRS:DKC1 GenomeRNAi:1736 NextBio:7039
ArrayExpress:O60832 Bgee:O60832 CleanEx:HS_DKC1
Genevestigator:O60832 GermOnline:ENSG00000130826 Uniprot:O60832
Length = 514
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 102/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>UNIPROTKB|F1RZ24 [details] [associations]
symbol:DKC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005697
"telomerase holoenzyme complex" evidence=IEA] [GO:0003720
"telomerase activity" evidence=IEA] [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0001522
"pseudouridine synthesis" evidence=IEA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GeneTree:ENSGT00510000047092
OMA:SHEPSAD GO:GO:0005697 GO:GO:0003720 EMBL:CU914693
Ensembl:ENSSSCT00000014017 Ensembl:ENSSSCT00000033158
Uniprot:F1RZ24
Length = 521
Score = 574 (207.1 bits), Expect = 1.1e-55, P = 1.1e-55
Identities = 103/144 (71%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 244 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHGV
Sbjct: 304 DSAVNAICYGAKIMLPGVLRYEDGIEVNQEIVVITTKGEAICMAVALMTTAVISTCDHGV 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 364 VAKIKRVIMERDTYPRKWGLGPKA 387
>MGI|MGI:1861727 [details] [associations]
symbol:Dkc1 "dyskeratosis congenita 1, dyskerin"
species:10090 "Mus musculus" [GO:0000154 "rRNA modification"
evidence=ISA;TAS] [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003720 "telomerase activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=TAS] [GO:0004730
"pseudouridylate synthase activity" evidence=TAS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005697 "telomerase holoenzyme complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IC;TAS] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0006396 "RNA processing"
evidence=TAS] [GO:0008152 "metabolic process" evidence=ISO]
[GO:0009451 "RNA modification" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0016853
"isomerase activity" evidence=IEA] [GO:0030519 "snoRNP binding"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 MGI:MGI:1861727 GO:GO:0005730 GO:GO:0003723
GO:GO:0015030 GO:GO:0030519 InterPro:IPR015947 SUPFAM:SSF88697
eggNOG:COG0130 HOGENOM:HOG000231224 KO:K11131 GO:GO:0009982
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GeneTree:ENSGT00510000047092
CTD:1736 HOVERGEN:HBG081442 GO:GO:0005697 GO:GO:0003720
EMBL:AJ250973 EMBL:AJ250972 EMBL:AJ250974 EMBL:AJ250975
EMBL:AJ250976 EMBL:AJ250978 EMBL:AJ250980 EMBL:AJ250981
EMBL:AJ250979 EMBL:AJ250977 EMBL:AK136418 EMBL:AL808110
IPI:IPI00113635 RefSeq:NP_001025478.1 UniGene:Mm.291062
ProteinModelPortal:Q9ESX5 SMR:Q9ESX5 STRING:Q9ESX5
PhosphoSite:Q9ESX5 PaxDb:Q9ESX5 PRIDE:Q9ESX5
Ensembl:ENSMUST00000033776 GeneID:245474 KEGG:mmu:245474
InParanoid:Q3UWE5 NextBio:386727 Bgee:Q9ESX5 Genevestigator:Q9ESX5
GermOnline:ENSMUSG00000031403 GO:GO:0004730 GO:GO:0000154
Uniprot:Q9ESX5
Length = 509
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 101/144 (70%), Positives = 129/144 (89%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+++K
Sbjct: 243 MQELRRVRSGVMSEKDHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRLVMK 302
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++EIV+++TKGEA+ +A+A MTT+ ++TCDHG+
Sbjct: 303 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEIVVITTKGEAICMAIALMTTAVISTCDHGI 362
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 363 VAKIKRVIMERDTYPRKWGLGPKA 386
>RGD|621780 [details] [associations]
symbol:Dkc1 "dyskeratosis congenita 1, dyskerin" species:10116
"Rattus norvegicus" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005654 "nucleoplasm"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005732
"small nucleolar ribonucleoprotein complex" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IDA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0015030 "Cajal body" evidence=IDA]
InterPro:IPR002478 InterPro:IPR002501 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 EMBL:Z34922 RGD:621780 GO:GO:0005730
GO:GO:0008283 GO:GO:0003723 GO:GO:0015030 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0006364 KO:K11131 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 CTD:1736 HOVERGEN:HBG081442
EMBL:BC099832 IPI:IPI00191460 PIR:A55163 RefSeq:NP_596910.1
UniGene:Rn.4223 ProteinModelPortal:P40615 IntAct:P40615
PhosphoSite:P40615 PRIDE:P40615 GeneID:170944 KEGG:rno:170944
NextBio:621465 Genevestigator:P40615 GO:GO:0005732 Uniprot:P40615
Length = 509
Score = 565 (203.9 bits), Expect = 9.9e-55, P = 9.9e-55
Identities = 101/144 (70%), Positives = 127/144 (88%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E D +VT+HD+ DA YLYD H+DES LRRV+ PLE LL HKR+++K
Sbjct: 244 MQELRRVRSGVVGERDHMVTMHDVLDAQYLYDHHRDESYLRRVVFPLEKLLTSHKRLVMK 303
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPG+LRYEDGIE+++E+V+++TKGEAV +A+A MTT+ ++TCDHGV
Sbjct: 304 DSAVNAICYGAKIMLPGLLRYEDGIEVNQEVVVITTKGEAVCVAIALMTTAVISTCDHGV 363
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 364 VAKIKRVIMERDTYPRKWGLGPKA 387
>UNIPROTKB|F1P0Q8 [details] [associations]
symbol:DKC1 "H/ACA ribonucleoprotein complex subunit 4"
species:9031 "Gallus gallus" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0003720 "telomerase activity"
evidence=IEA] [GO:0005697 "telomerase holoenzyme complex"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR002478 InterPro:IPR002501 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR015947 SUPFAM:SSF88697 OMA:TIHESKL
GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127
Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451
GeneTree:ENSGT00510000047092 IPI:IPI00572837 GO:GO:0005697
GO:GO:0003720 EMBL:AADN02013221 Ensembl:ENSGALT00000008105
Uniprot:F1P0Q8
Length = 470
Score = 557 (201.1 bits), Expect = 7.0e-54, P = 7.0e-54
Identities = 102/144 (70%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKR+++K
Sbjct: 195 MQELRRVRSGILGEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMK 254
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+++EIV+++TKGEA+ LA+A MTT+ ++TCDHGV
Sbjct: 255 DSAVNAICYGAKIMLPGVLRYEDGIELNQEIVVITTKGEAICLAIALMTTAVISTCDHGV 314
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 315 VAKIKRVIMERDTYPRKWGLGPKA 338
>UNIPROTKB|Q5ZJH9 [details] [associations]
symbol:DKC1 "H/ACA ribonucleoprotein complex subunit 4"
species:9031 "Gallus gallus" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0000723 "telomere maintenance" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007004 "telomere maintenance via
telomerase" evidence=TAS] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0005654 GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0007004 GO:GO:0006364
eggNOG:COG0130 HOGENOM:HOG000231224 KO:K11131 GO:GO:0009982
GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068
SUPFAM:SSF55120 TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451
Reactome:REACT_115612 EMBL:AJ720455 IPI:IPI00572837
RefSeq:NP_001026286.1 UniGene:Gga.1015 ProteinModelPortal:Q5ZJH9
STRING:Q5ZJH9 PRIDE:Q5ZJH9 GeneID:422196 KEGG:gga:422196 CTD:1736
HOVERGEN:HBG081442 InParanoid:Q5ZJH9 OrthoDB:EOG4NS3BP
NextBio:20824864 Uniprot:Q5ZJH9
Length = 516
Score = 555 (200.4 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 102/144 (70%), Positives = 125/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E D +VT+HD+ DA + YD +KD+S LRRVI PLE LL HKR+++K
Sbjct: 241 MQELRRVRSGILGEMDNMVTMHDVLDAQWQYDNNKDDSYLRRVILPLEKLLTSHKRLVMK 300
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE+ +EIV+++TKGEA+ LA+A MTT+ ++TCDHGV
Sbjct: 301 DSAVNAICYGAKIMLPGVLRYEDGIELKQEIVVITTKGEAICLAIALMTTAVISTCDHGV 360
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 361 VAKIKRVIMERDTYPRKWGLGPKA 384
>ZFIN|ZDB-GENE-031118-120 [details] [associations]
symbol:dkc1 "dyskeratosis congenita 1, dyskerin"
species:7955 "Danio rerio" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0009451 "RNA modification" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0060216 "definitive hemopoiesis"
evidence=IGI;IMP] [GO:0006364 "rRNA processing" evidence=IMP]
InterPro:IPR002478 InterPro:IPR002501 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 ZFIN:ZDB-GENE-031118-120
GO:GO:0003723 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0006364
eggNOG:COG0130 HOGENOM:HOG000231224 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GO:GO:0060216
HOVERGEN:HBG081442 OrthoDB:EOG4NS3BP EMBL:BC100010 IPI:IPI00654498
UniGene:Dr.33715 ProteinModelPortal:Q498Z9 STRING:Q498Z9
InParanoid:Q498Z9 ArrayExpress:Q498Z9 Uniprot:Q498Z9
Length = 507
Score = 544 (196.6 bits), Expect = 1.7e-52, P = 1.7e-52
Identities = 99/144 (68%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ E+D LVT+HD+ DA + +D +KDE+ LRRVI PLE LL+ HK I++K
Sbjct: 238 MQELRRVRSGVLGEKDNLVTMHDVLDAQWQFDHNKDETYLRRVIFPLEKLLISHKGIVMK 297
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA+IMLPGVLRYEDGIE++++IV+++TKGEA+ A+A MTT+ ++TCDHGV
Sbjct: 298 DSAVNAICYGAKIMLPGVLRYEDGIEVNQDIVVITTKGEAICTAVALMTTAVISTCDHGV 357
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDTYPRKWGLGPK+
Sbjct: 358 VAKIKRVIMERDTYPRKWGLGPKA 381
>DICTYBASE|DDB_G0281933 [details] [associations]
symbol:nola4 "H/ACA RNP complex subunit 4"
species:44689 "Dictyostelium discoideum" [GO:0009982 "pseudouridine
synthase activity" evidence=IEA] [GO:0009451 "RNA modification"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0001522
"pseudouridine synthesis" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=ISS] [GO:0007004 "telomere maintenance via
telomerase" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IEA;ISS]
[GO:0005697 "telomerase holoenzyme complex" evidence=ISS]
[GO:0003720 "telomerase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 dictyBase:DDB_G0281933 GO:GO:0005730
GenomeReviews:CM000152_GR GO:GO:0008283 GO:GO:0003723
EMBL:AAFI02000043 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0007004
GO:GO:0006364 eggNOG:COG0130 KO:K11131 OMA:TIHESKL GO:GO:0009982
GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068
SUPFAM:SSF55120 TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451
RefSeq:XP_640508.1 HSSP:Q57612 ProteinModelPortal:Q54T81
IntAct:Q54T81 STRING:Q54T81 PRIDE:Q54T81 EnsemblProtists:DDB0233679
GeneID:8623323 KEGG:ddi:DDB_G0281933 ProtClustDB:CLSZ2429005
GO:GO:0005697 GO:GO:0003720 Uniprot:Q54T81
Length = 540
Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 98/144 (68%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI SE+ G VT+HD+KDA Y YD KDES LRRVI+PLE +L +KRI++K
Sbjct: 227 MQELRRVRSGIMSEKKGQVTMHDVKDAQYEYDNSKDESYLRRVIQPLEAILTNYKRIVVK 286
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSA+NA+CYGA++M+PG+LRYE IE +EE+V+++TKGEA+A+ +AQMTT++MATCDHGV
Sbjct: 287 DSAINAICYGAKLMIPGLLRYEQDIESNEEVVLITTKGEAIAIGIAQMTTASMATCDHGV 346
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VA IKRVIMDRD YP +WGLGPK+
Sbjct: 347 VATIKRVIMDRDVYPVRWGLGPKA 370
>POMBASE|SPAC29A4.04c [details] [associations]
symbol:cbf5 "pseudouridylate synthase Cbf5 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0000495 "box H/ACA
snoRNA 3'-end processing" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
[GO:0006399 "tRNA metabolic process" evidence=NAS] [GO:0009982
"pseudouridine synthase activity" evidence=ISO] [GO:0019843 "rRNA
binding" evidence=ISO] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=ISO] [GO:0031120 "snRNA pseudouridine synthesis"
evidence=ISO] [GO:0031429 "box H/ACA snoRNP complex" evidence=ISO]
[GO:0034513 "box H/ACA snoRNA binding" evidence=IC]
InterPro:IPR002478 InterPro:IPR002501 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 PomBase:SPAC29A4.04c GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0019843
InterPro:IPR015947 SUPFAM:SSF88697 eggNOG:COG0130
HOGENOM:HOG000231224 KO:K11131 GO:GO:0009982 InterPro:IPR012960
PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
TIGRFAMs:TIGR00451 OrthoDB:EOG4J6W08 GO:GO:0031429 GO:GO:0000495
GO:GO:0031118 GO:GO:0031120 PIR:T38485 RefSeq:NP_594878.1
ProteinModelPortal:O14007 STRING:O14007 EnsemblFungi:SPAC29A4.04c.1
GeneID:2542481 KEGG:spo:SPAC29A4.04c OMA:PTEWLRN NextBio:20803536
GO:GO:0034513 GO:GO:0006399 Uniprot:O14007
Length = 474
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 97/144 (67%), Positives = 126/144 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VT+HD+ DA ++YD +DES LRRVIRPLE LLVG+KRI++K
Sbjct: 218 MQELRRVRSGCLSENDDIVTMHDVLDAQWIYDNTRDESYLRRVIRPLESLLVGYKRIVVK 277
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LRYE GIE++EEIV+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 278 DSAVNAICYGAKLMIPGLLRYEAGIEVNEEIVLITTKGEAIAVGIAQMSTVELSTCDHGV 337
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAK+KR IM+RD YPR+WGLGP+S
Sbjct: 338 VAKVKRCIMERDVYPRRWGLGPQS 361
>CGD|CAL0001653 [details] [associations]
symbol:orf19.1833 species:5476 "Candida albicans" [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0031120
"snRNA pseudouridine synthesis" evidence=IEA] [GO:0000495 "box
H/ACA snoRNA 3'-end processing" evidence=IEA] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=IEA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 CGD:CAL0001653 GO:GO:0005737 GO:GO:0000775
GO:GO:0005730 GO:GO:0003677 GO:GO:0003723 GO:GO:0030529
GO:GO:0005874 InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0006364
eggNOG:COG0130 KO:K11131 GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 EMBL:U59149 EMBL:AACQ01000244
EMBL:AACQ01000240 RefSeq:XP_710717.1 RefSeq:XP_710755.1
ProteinModelPortal:O43101 STRING:O43101 GeneID:3647637
GeneID:3647682 KEGG:cal:CaO19.1833 KEGG:cal:CaO19.9391
Uniprot:O43101
Length = 479
Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
Identities = 92/142 (64%), Positives = 124/142 (87%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D LVTLHD+ DA Y+YD +DES LR++I+PLE LLVG+KR+++K
Sbjct: 214 MQELRRVRSGAMSESDNLVTLHDVLDAQYVYDNTRDESYLRKIIQPLESLLVGYKRVVVK 273
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVN+VCYGA++M+PG+LRYE+GIE+ +E+V+++TKGEA+A+ +AQM+T + +CDHG+
Sbjct: 274 DSAVNSVCYGAKLMIPGLLRYEEGIELYDEVVLMTTKGEAIAIGIAQMSTVDLQSCDHGI 333
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RDTYPR+WGLGP
Sbjct: 334 VAKVKRCIMERDTYPRRWGLGP 355
>TAIR|locus:2080625 [details] [associations]
symbol:NAP57 "homologue of NAP57" species:3702
"Arabidopsis thaliana" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0009451 "RNA modification" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA;ISS;TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA;IDA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0001510 "RNA
methylation" evidence=RCA] [GO:0006164 "purine nucleotide
biosynthetic process" evidence=RCA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 GO:GO:0005829 GO:GO:0009506 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0003723 GO:GO:0030529
InterPro:IPR015947 SUPFAM:SSF88697 EMBL:AL138655 GO:GO:0006364
EMBL:AF234984 EMBL:AY049247 EMBL:BT003810 EMBL:F20038
IPI:IPI00538845 PIR:T47775 RefSeq:NP_191274.1 UniGene:At.19647
ProteinModelPortal:Q9LD90 SMR:Q9LD90 IntAct:Q9LD90 STRING:Q9LD90
PaxDb:Q9LD90 PRIDE:Q9LD90 EnsemblPlants:AT3G57150.1 GeneID:824882
KEGG:ath:AT3G57150 GeneFarm:4939 TAIR:At3g57150 eggNOG:COG0130
HOGENOM:HOG000231224 InParanoid:Q9LD90 KO:K11131 OMA:TIHESKL
PhylomeDB:Q9LD90 ProtClustDB:CLSN2684542 Genevestigator:Q9LD90
GermOnline:AT3G57150 GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960
PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
TIGRFAMs:TIGR00451 Uniprot:Q9LD90
Length = 565
Score = 523 (189.2 bits), Expect = 2.8e-50, P = 2.8e-50
Identities = 92/144 (63%), Positives = 124/144 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSGI E + +VT+HD+ DA ++YD +DES LRRVI PLE +L +KR+++K
Sbjct: 234 MQELRRVRSGILGENNNMVTMHDVMDAQFVYDNSRDESYLRRVIMPLEMILTSYKRLVVK 293
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++M+PG+LR+E+ I++ E+V+++TKGEA+A+ +A+MTTS MATCDHGV
Sbjct: 294 DSAVNAICYGAKLMIPGLLRFENDIDVGTEVVLMTTKGEAIAVGIAEMTTSVMATCDHGV 353
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRV+MDRDTYPRKWGLGP++
Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRA 377
>ASPGD|ASPL0000074111 [details] [associations]
symbol:swoC species:162425 "Emericella nidulans"
[GO:0030010 "establishment of cell polarity" evidence=IMP]
[GO:0051211 "anisotropic cell growth" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0048315 "conidium formation"
evidence=IMP] [GO:0004730 "pseudouridylate synthase activity"
evidence=ISA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0030686
"90S preribosome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031429 "box H/ACA snoRNP complex" evidence=IEA] [GO:0009982
"pseudouridine synthase activity" evidence=IEA] [GO:0031120 "snRNA
pseudouridine synthesis" evidence=IEA] [GO:0000495 "box H/ACA
snoRNA 3'-end processing" evidence=IEA] [GO:0031118 "rRNA
pseudouridine synthesis" evidence=IEA] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004521 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890
SMART:SM00359 GO:GO:0005737 GO:GO:0000775 GO:GO:0003677
GO:GO:0003723 EMBL:BN001303 GO:GO:0005874 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0030686 EMBL:AACD01000163 eggNOG:COG0130
HOGENOM:HOG000231224 KO:K11131 OMA:TIHESKL GO:GO:0009982
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 EMBL:U59148 EMBL:AY057454
RefSeq:XP_682120.1 ProteinModelPortal:O43100 STRING:O43100
EnsemblFungi:CADANIAT00006202 GeneID:2868403 KEGG:ani:AN8851.2
OrthoDB:EOG4J6W08 GO:GO:0031429 GO:GO:0000495 GO:GO:0031118
GO:GO:0031120 Uniprot:O43100
Length = 481
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 93/142 (65%), Positives = 122/142 (85%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE +G+VTLHD+ DA +LYD +DES LR+VI+PLE LL +KRI++K
Sbjct: 215 MQELRRVRSGAMSENEGMVTLHDVLDAQWLYDNQRDESYLRKVIKPLESLLTTYKRIVVK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LR+E GIE+ EE+V+++TKGEA+A+ +AQM+T ++TCDHGV
Sbjct: 275 DSAVNAVCYGAKLMIPGLLRFEAGIELGEEVVLMTTKGEAIAIGIAQMSTVELSTCDHGV 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 335 VAKVKRCIMERDLYPRRWGLGP 356
>SGD|S000004165 [details] [associations]
symbol:CBF5 "Pseudouridine synthase catalytic subunit of box
H/ACA snoRNPs" species:4932 "Saccharomyces cerevisiae" [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IC] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0000495 "box H/ACA snoRNA 3'-end processing"
evidence=IMP] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016853 "isomerase activity"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0030686 "90S preribosome" evidence=IDA]
[GO:0009982 "pseudouridine synthase activity"
evidence=IEA;ISS;IMP;IDA] [GO:0009451 "RNA modification"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] [GO:0031429 "box H/ACA snoRNP complex"
evidence=IPI] [GO:0031118 "rRNA pseudouridine synthesis"
evidence=IMP] [GO:0006364 "rRNA processing" evidence=IEA;IMP]
[GO:0031120 "snRNA pseudouridine synthesis" evidence=IMP;IDA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR002478 InterPro:IPR002501 InterPro:IPR004521
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 SGD:S000004165 GO:GO:0005737
GO:GO:0000775 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:BK006945 GO:GO:0003723 GO:GO:0005874 EMBL:U17246
InterPro:IPR015947 SUPFAM:SSF88697 GO:GO:0030686 eggNOG:COG0130
HOGENOM:HOG000231224 KO:K11131 GO:GO:0009982 InterPro:IPR012960
PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
TIGRFAMs:TIGR00451 OrthoDB:EOG4J6W08 GO:GO:0031429 GO:GO:0000495
GO:GO:0031118 GO:GO:0031120 EMBL:L12351 PIR:S41853
RefSeq:NP_013276.1 PDB:3U28 PDB:3UAI PDB:3ZV0 PDBsum:3U28
PDBsum:3UAI PDBsum:3ZV0 ProteinModelPortal:P33322 SMR:P33322
DIP:DIP-4472N IntAct:P33322 MINT:MINT-501145 STRING:P33322
PaxDb:P33322 PeptideAtlas:P33322 EnsemblFungi:YLR175W GeneID:850872
KEGG:sce:YLR175W CYGD:YLR175w GeneTree:ENSGT00510000047092
OMA:SHEPSAD NextBio:967209 Genevestigator:P33322 GermOnline:YLR175W
Uniprot:P33322
Length = 483
Score = 521 (188.5 bits), Expect = 4.6e-50, P = 4.6e-50
Identities = 94/142 (66%), Positives = 123/142 (86%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG SE D +VTLHD+ DA ++YD +DES LR +I+PLE LLVG+KRI++K
Sbjct: 213 MQELRRVRSGALSENDNMVTLHDVMDAQWVYDNTRDESYLRSIIQPLETLLVGYKRIVVK 272
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++M+PG+LRYE+GIE+ +EIV+++TKGEA+A+A+AQM+T +A+CDHGV
Sbjct: 273 DSAVNAVCYGAKLMIPGLLRYEEGIELYDEIVLITTKGEAIAVAIAQMSTVDLASCDHGV 332
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VA +KR IM+RD YPR+WGLGP
Sbjct: 333 VASVKRCIMERDLYPRRWGLGP 354
>WB|WBGene00010478 [details] [associations]
symbol:K01G5.5 species:6239 "Caenorhabditis elegans"
[GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0040007 GO:GO:0040010 GO:GO:0005730 GO:GO:0002119
GO:GO:0000003 GO:GO:0003723 GO:GO:0030529 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0006364 eggNOG:COG0130 HOGENOM:HOG000231224
KO:K11131 OMA:TIHESKL GO:GO:0009982 GO:GO:0001522
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GeneTree:ENSGT00510000047092
EMBL:Z92803 PIR:T23199 RefSeq:NP_499370.1 ProteinModelPortal:O17919
SMR:O17919 DIP:DIP-25862N IntAct:O17919 MINT:MINT-1040832
STRING:O17919 PaxDb:O17919 EnsemblMetazoa:K01G5.5.1
EnsemblMetazoa:K01G5.5.2 GeneID:176504 KEGG:cel:CELE_K01G5.5
UCSC:K01G5.5.1 CTD:176504 WormBase:K01G5.5 InParanoid:O17919
NextBio:892856 Uniprot:O17919
Length = 445
Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
Identities = 92/142 (64%), Positives = 118/142 (83%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRRNRSGI E + +VT+HD+ DA YL D KDES +R ++RPLE LL HKR+++K
Sbjct: 231 MQELRRNRSGICDENENMVTMHDVLDAQYLLDTQKDESYMRHIVRPLEALLTQHKRVVVK 290
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DS +NA+CYGA+I++PG+LRY+D IE+ +EIVI+STKGEA+ +A+AQM TST+A+ DHGV
Sbjct: 291 DSCINAICYGAKILIPGILRYDDDIEVGKEIVIMSTKGEAICIAIAQMNTSTIASVDHGV 350
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK KRVIM+RD Y RKWGLGP
Sbjct: 351 VAKSKRVIMERDVYGRKWGLGP 372
>UNIPROTKB|E2RGN8 [details] [associations]
symbol:E2RGN8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0009982 "pseudouridine synthase activity"
evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0001522 "pseudouridine
synthesis" evidence=IEA] InterPro:IPR002478 InterPro:IPR004802
InterPro:IPR020103 Pfam:PF01472 PROSITE:PS50890 SMART:SM00359
GO:GO:0003723 GO:GO:0006396 InterPro:IPR015947 SUPFAM:SSF88697
GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127
Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
GeneTree:ENSGT00510000047092 EMBL:AAEX03016940
Ensembl:ENSCAFT00000014816 Uniprot:E2RGN8
Length = 498
Score = 498 (180.4 bits), Expect = 1.2e-47, P = 1.2e-47
Identities = 94/144 (65%), Positives = 119/144 (82%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG+ SE+D + HD+ DA + YD KDES L RV+ PLE LL HKR+++K
Sbjct: 236 MQELRRVRSGVMSEKDHM---HDVLDAQWPYDSRKDESYLLRVVYPLEKLLTSHKRLVMK 292
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
D +NAVCY A+IMLPGVLRYEDGIE++EEI++++TKGEAV +A+A MTT+ ++TCDHG+
Sbjct: 293 DIFMNAVCYAAKIMLPGVLRYEDGIEVNEEILVITTKGEAVCMAIALMTTAVISTCDHGM 352
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
VAKIKRVIM+RDT PRKWGLGPK+
Sbjct: 353 VAKIKRVIMERDTCPRKWGLGPKA 376
>UNIPROTKB|G4N1Q3 [details] [associations]
symbol:MGG_07518 "Centromere/microtubule-binding protein
cbf5" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004521 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
EMBL:CM001233 GO:GO:0003723 GO:GO:0043581 InterPro:IPR015947
SUPFAM:SSF88697 GO:GO:0030686 KO:K11131 GO:GO:0009982
InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120
TIGRFAMs:TIGR00425 TIGRFAMs:TIGR00451 GO:GO:0031429 GO:GO:0000495
GO:GO:0031118 GO:GO:0031120 RefSeq:XP_003711432.1
ProteinModelPortal:G4N1Q3 EnsemblFungi:MGG_07518T0 GeneID:2683438
KEGG:mgr:MGG_07518 Uniprot:G4N1Q3
Length = 485
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 89/142 (62%), Positives = 116/142 (81%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR RSG E L TLHD+ DA +L D +DES LR+VI+PLE LL +KR+++K
Sbjct: 229 MQELRRVRSGAMDETKDLHTLHDVLDAQWLMDNTRDESYLRKVIQPLETLLTTYKRLVVK 288
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNAVCYGA++MLPG+LRYE IE+ EE+V+++TKGEA+A+ +AQM+T +++CDHGV
Sbjct: 289 DSAVNAVCYGAKLMLPGLLRYEADIELHEEVVLMTTKGEAIAIGIAQMSTVEISSCDHGV 348
Query: 121 VAKIKRVIMDRDTYPRKWGLGP 142
VAK+KR IM+RD YPR+WGLGP
Sbjct: 349 VAKVKRCIMERDLYPRRWGLGP 370
>GENEDB_PFALCIPARUM|PF14_0174 [details] [associations]
symbol:PF14_0174 "small nucleolar
ribonucleoprotein, snoRNP, putative" species:5833 "Plasmodium
falciparum" [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002478
InterPro:IPR002501 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01472 Pfam:PF01509 PROSITE:PS50890 SMART:SM00359
GO:GO:0003723 GO:GO:0006396 EMBL:AE014187 InterPro:IPR015947
SUPFAM:SSF88697 HOGENOM:HOG000231224 KO:K11131 OMA:TIHESKL
GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127
Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
ProtClustDB:CLSZ2429005 HSSP:Q9WZW0 RefSeq:XP_001348347.1
ProteinModelPortal:Q8ILS0 IntAct:Q8ILS0 MINT:MINT-1608535
PRIDE:Q8ILS0 EnsemblProtists:PF14_0174:mRNA GeneID:811755
KEGG:pfa:PF14_0174 EuPathDB:PlasmoDB:PF3D7_1417500 Uniprot:Q8ILS0
Length = 466
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 88/144 (61%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DES LR++I PLE LL+ RI++K
Sbjct: 215 MQELRRVKSGNMTEYDNMCTLHDILDAQYIYDTTGDESYLRKIITPLEKLLINFPRIVIK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+++ EIVI++TKGEAVALA+AQMT++ +AT DHGV
Sbjct: 275 DSAVNAICYGAKLTIPGVLRFDNNIDVNTEIVIMTTKGEAVALAIAQMTSTVIATVDHGV 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ KRVIMDRDTY KWG G +S
Sbjct: 335 VSLTKRVIMDRDTYDVKWGFGNRS 358
>UNIPROTKB|Q8ILS0 [details] [associations]
symbol:PF14_0174 "Pseudouridine synthase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR002478 InterPro:IPR002501
InterPro:IPR004802 InterPro:IPR020103 Pfam:PF01472 Pfam:PF01509
PROSITE:PS50890 SMART:SM00359 GO:GO:0003723 GO:GO:0006396
EMBL:AE014187 InterPro:IPR015947 SUPFAM:SSF88697
HOGENOM:HOG000231224 KO:K11131 OMA:TIHESKL GO:GO:0009982
GO:GO:0001522 InterPro:IPR012960 PANTHER:PTHR23127 Pfam:PF08068
SUPFAM:SSF55120 TIGRFAMs:TIGR00425 ProtClustDB:CLSZ2429005
HSSP:Q9WZW0 RefSeq:XP_001348347.1 ProteinModelPortal:Q8ILS0
IntAct:Q8ILS0 MINT:MINT-1608535 PRIDE:Q8ILS0
EnsemblProtists:PF14_0174:mRNA GeneID:811755 KEGG:pfa:PF14_0174
EuPathDB:PlasmoDB:PF3D7_1417500 Uniprot:Q8ILS0
Length = 466
Score = 461 (167.3 bits), Expect = 1.0e-43, P = 1.0e-43
Identities = 88/144 (61%), Positives = 115/144 (79%)
Query: 1 MIELRRNRSGIQSEEDGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRIILK 60
M ELRR +SG +E D + TLHDI DA Y+YD DES LR++I PLE LL+ RI++K
Sbjct: 215 MQELRRVKSGNMTEYDNMCTLHDILDAQYIYDTTGDESYLRKIITPLEKLLINFPRIVIK 274
Query: 61 DSAVNAVCYGAQIMLPGVLRYEDGIEMDEEIVIVSTKGEAVALALAQMTTSTMATCDHGV 120
DSAVNA+CYGA++ +PGVLR+++ I+++ EIVI++TKGEAVALA+AQMT++ +AT DHGV
Sbjct: 275 DSAVNAICYGAKLTIPGVLRFDNNIDVNTEIVIMTTKGEAVALAIAQMTSTVIATVDHGV 334
Query: 121 VAKIKRVIMDRDTYPRKWGLGPKS 144
V+ KRVIMDRDTY KWG G +S
Sbjct: 335 VSLTKRVIMDRDTYDVKWGFGNRS 358
>UNIPROTKB|C9IYT0 [details] [associations]
symbol:DKC1 "H/ACA ribonucleoprotein complex subunit 4"
species:9606 "Homo sapiens" [GO:0001522 "pseudouridine synthesis"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0009982 "pseudouridine synthase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR002501 InterPro:IPR004802 InterPro:IPR020103
Pfam:PF01509 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
HOGENOM:HOG000231224 GO:GO:0009982 GO:GO:0001522 InterPro:IPR012960
PANTHER:PTHR23127 Pfam:PF08068 SUPFAM:SSF55120 TIGRFAMs:TIGR00425
EMBL:AC109993 HGNC:HGNC:2890 ChiTaRS:DKC1 IPI:IPI00852712
ProteinModelPortal:C9IYT0 SMR:C9IYT0 STRING:C9IYT0 PRIDE:C9IYT0
Ensembl:ENST00000413910 ArrayExpress:C9IYT0 Bgee:C9IYT0
Uniprot:C9IYT0
Length = 259
Score = 149 (57.5 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 16 DGLVTLHDIKDAMYLYDQHKDESLLRRVIRPLEGLLVGHKRI 57
D +VT+HD+ DA +LYD HKDES LRRV+ PLE LL HKR+
Sbjct: 218 DHMVTMHDVLDAQWLYDNHKDESYLRRVVYPLEKLLTSHKRL 259
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.392 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 144 144 0.00091 102 3 11 22 0.44 31
30 0.48 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 568 (60 KB)
Total size of DFA: 128 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.75u 0.11s 13.86t Elapsed: 00:00:00
Total cpu time: 13.75u 0.11s 13.86t Elapsed: 00:00:00
Start: Thu Aug 15 15:40:06 2013 End: Thu Aug 15 15:40:06 2013