Query psy11780
Match_columns 383
No_of_seqs 297 out of 1814
Neff 8.5
Searched_HMMs 29240
Date Fri Aug 16 18:47:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11780.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11780hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q2v_A Cadherin-1; cell adhesi 100.0 2.3E-53 7.8E-58 433.7 32.2 312 3-375 60-389 (550)
2 1l3w_A EP-cadherin, C-cadherin 100.0 9E-54 3.1E-58 436.1 27.9 312 3-375 66-395 (546)
3 3q2w_A Cadherin-2; cell adhesi 100.0 6.3E-53 2.2E-57 431.2 32.8 316 3-375 60-395 (559)
4 3ubh_A Neural-cadherin; cell a 100.0 7.2E-52 2.5E-56 409.4 32.3 300 3-374 57-377 (419)
5 1q55_A EP-cadherin, C-cadherin 100.0 5.7E-52 2E-56 442.3 27.6 312 3-375 215-544 (880)
6 3q2w_A Cadherin-2; cell adhesi 100.0 1.3E-50 4.4E-55 414.2 29.2 309 2-373 171-501 (559)
7 3q2v_A Cadherin-1; cell adhesi 100.0 2.4E-49 8.4E-54 403.9 32.6 306 2-372 172-493 (550)
8 1l3w_A EP-cadherin, C-cadherin 100.0 1.7E-50 5.7E-55 412.0 23.0 304 3-372 179-495 (546)
9 1q55_A EP-cadherin, C-cadherin 100.0 7.6E-49 2.6E-53 418.3 21.5 301 2-367 327-640 (880)
10 2a62_A Cadherin-8; extracellul 100.0 1.2E-47 4.2E-52 365.8 16.9 259 52-374 6-276 (322)
11 3ubf_A Neural-cadherin; cell a 100.0 4.8E-44 1.6E-48 340.8 28.2 245 3-311 52-316 (316)
12 2a62_A Cadherin-8; extracellul 100.0 3.1E-44 1E-48 342.4 16.2 251 3-305 57-322 (322)
13 3ubf_A Neural-cadherin; cell a 100.0 1.2E-42 4.2E-47 331.1 25.4 228 102-375 32-270 (316)
14 3mvs_A Cadherin-23, otocadheri 100.0 1.3E-42 4.5E-47 311.8 20.8 207 37-311 2-210 (210)
15 2x2u_A Proto-oncogene tyrosine 100.0 4.9E-44 1.7E-48 328.5 9.4 220 42-315 2-245 (246)
16 3ubh_A Neural-cadherin; cell a 100.0 2.4E-40 8.1E-45 327.0 29.1 236 2-306 167-418 (419)
17 2a4e_A Cadherin-11; dimer, cal 100.0 2E-40 6.8E-45 298.3 22.3 205 50-313 5-215 (215)
18 3qrb_A Cadherin-1; cell adhesi 100.0 8.2E-37 2.8E-41 274.7 22.1 196 51-306 5-213 (213)
19 2qvi_A Cadherin-2; beta barrel 100.0 2.9E-37 9.7E-42 277.9 18.3 197 52-306 6-215 (215)
20 3k5r_A Cadherin 13; mouse, str 100.0 4.1E-37 1.4E-41 277.6 18.4 196 52-306 7-218 (218)
21 3ppe_A Vascular endothelial ca 100.0 9.4E-36 3.2E-40 265.7 23.9 192 52-306 6-203 (203)
22 3lnd_A CDH6 protein, cadherin 100.0 1.7E-36 5.7E-41 271.5 13.5 196 52-306 6-207 (207)
23 4apx_B Protocadherin-15, otoca 100.0 7.6E-32 2.6E-36 246.2 16.9 204 49-306 20-237 (242)
24 3mvs_A Cadherin-23, otocadheri 100.0 1.8E-31 6.3E-36 239.2 16.5 160 174-375 3-165 (210)
25 2a4e_A Cadherin-11; dimer, cal 100.0 4.7E-29 1.6E-33 224.1 18.2 155 184-375 6-166 (215)
26 2qvi_A Cadherin-2; beta barrel 100.0 4.4E-29 1.5E-33 224.4 15.9 154 185-375 6-172 (215)
27 2x2u_A Proto-oncogene tyrosine 100.0 1.2E-30 4E-35 239.4 5.6 162 178-375 2-196 (246)
28 3lnd_A CDH6 protein, cadherin 100.0 8.9E-29 3E-33 221.2 10.9 154 185-375 6-165 (207)
29 3qrb_A Cadherin-1; cell adhesi 100.0 7.7E-28 2.6E-32 216.1 17.0 152 185-375 6-173 (213)
30 3ppe_A Vascular endothelial ca 100.0 1.7E-27 5.7E-32 212.3 17.9 152 184-375 5-162 (203)
31 2yst_A Protocadherin-7; BH-PCD 100.0 1E-28 3.6E-33 201.3 7.8 115 167-312 2-119 (119)
32 3k5r_A Cadherin 13; mouse, str 100.0 5E-28 1.7E-32 218.1 12.8 151 185-375 7-172 (218)
33 2ee0_A Protocadherin-9; Ca dom 99.9 7.4E-26 2.5E-30 182.8 7.7 109 167-308 2-114 (114)
34 2yst_A Protocadherin-7; BH-PCD 99.9 1.8E-25 6.2E-30 182.0 6.3 116 33-177 3-119 (119)
35 4apx_B Protocadherin-15, otoca 99.9 6.6E-24 2.3E-28 193.6 15.1 164 183-375 21-195 (242)
36 2yqg_A Desmoglein-2, HDGC; cad 99.9 1.1E-23 3.7E-28 172.3 4.3 113 173-317 6-123 (123)
37 2ee0_A Protocadherin-9; Ca dom 99.9 1.3E-22 4.4E-27 163.7 6.5 110 33-173 3-114 (114)
38 2yqg_A Desmoglein-2, HDGC; cad 99.8 3.1E-22 1.1E-26 163.6 2.9 115 37-181 6-122 (123)
39 1ncg_A N-cadherin; cell adhesi 99.8 5.8E-21 2E-25 153.0 9.1 98 183-314 6-110 (110)
40 1ncg_A N-cadherin; cell adhesi 99.8 6.1E-20 2.1E-24 147.0 7.3 101 50-179 6-110 (110)
41 1wyj_A Protocadherin beta 14; 99.8 2.3E-20 8E-25 152.7 2.1 109 182-322 11-123 (125)
42 1wyj_A Protocadherin beta 14; 99.7 1.3E-19 4.6E-24 148.2 -0.6 109 49-187 11-123 (125)
43 1zvn_A Mn-cadherin; strand dim 99.7 1.1E-17 3.7E-22 131.0 10.1 90 184-306 6-99 (99)
44 1zxk_A Cadherin-8; strand dime 99.7 2.7E-17 9.2E-22 128.5 10.3 91 184-306 5-98 (98)
45 3k6d_A T-cadherin; cell adhesi 99.7 2.4E-17 8.2E-22 129.2 7.8 91 51-171 5-99 (99)
46 3k6f_A T-cadherin; cell adhesi 99.7 1.6E-16 5.4E-21 124.7 9.5 90 52-171 7-100 (100)
47 1zvn_A Mn-cadherin; strand dim 99.7 1.3E-16 4.3E-21 124.9 8.7 91 51-171 6-99 (99)
48 3k6i_A T-cadherin; cell adhesi 99.7 2.7E-16 9.3E-21 123.2 10.3 90 52-171 6-99 (99)
49 3k6d_A T-cadherin; cell adhesi 99.7 1.5E-16 5.2E-21 124.6 8.8 88 184-306 5-99 (99)
50 1zxk_A Cadherin-8; strand dime 99.7 1.7E-16 5.8E-21 124.0 8.5 92 51-171 5-98 (98)
51 2omz_B Epithelial-cadherin; le 99.7 1.8E-16 6.1E-21 125.5 8.3 89 185-307 10-105 (105)
52 3k6f_A T-cadherin; cell adhesi 99.7 3.9E-16 1.3E-20 122.5 9.6 87 185-306 7-100 (100)
53 3k6i_A T-cadherin; cell adhesi 99.6 7.3E-16 2.5E-20 120.7 10.6 87 185-306 6-99 (99)
54 2omz_B Epithelial-cadherin; le 99.6 1.4E-15 4.9E-20 120.3 8.0 92 52-172 10-105 (105)
55 1wuz_A Pcdha4 protein, CNR-EC1 99.5 3.7E-15 1.3E-19 117.5 2.5 98 182-310 3-103 (103)
56 1wuz_A Pcdha4 protein, CNR-EC1 99.4 1.7E-14 5.9E-19 113.7 -1.7 95 49-175 3-103 (103)
57 3pdd_A Glycoside hydrolase, fa 93.6 3.1 0.0001 35.4 16.2 104 139-264 59-166 (190)
58 3pdd_A Glycoside hydrolase, fa 91.9 5.3 0.00018 33.9 17.3 112 13-171 59-180 (190)
59 1op4_A Neural-cadherin; beta s 89.9 1.3 4.4E-05 36.6 8.1 81 38-154 31-111 (159)
60 1op4_A Neural-cadherin; beta s 88.6 3.5 0.00012 34.0 9.8 80 175-264 32-111 (159)
61 3rb5_A Na/Ca exchange protein; 86.1 20 0.00068 32.7 14.5 153 173-358 6-161 (298)
62 2yhg_A SDE_182CT, cellulose-bi 84.8 3.4 0.00012 39.8 8.9 49 117-169 388-436 (437)
63 3rb5_A Na/Ca exchange protein; 83.6 22 0.00074 32.4 13.5 77 137-220 87-163 (298)
64 2yhg_A SDE_182CT, cellulose-bi 80.6 14 0.00047 35.6 11.2 92 172-304 330-436 (437)
65 2yrl_A KIAA1837 protein; PKD d 75.9 5.2 0.00018 30.2 5.6 30 251-309 69-98 (102)
66 3pe9_A Fibronectin(III)-like m 70.1 31 0.0011 25.7 10.2 29 140-171 60-88 (98)
67 2yrl_A KIAA1837 protein; PKD d 65.9 13 0.00044 27.9 5.8 31 139-173 67-97 (102)
68 3pe9_A Fibronectin(III)-like m 54.4 62 0.0021 24.0 7.7 58 195-264 17-74 (98)
69 2kpn_A Bacillolysin; solution 52.6 42 0.0014 25.3 6.5 44 129-176 47-90 (103)
70 2y72_A Collagenase, collagenas 51.4 26 0.00088 25.1 5.1 14 251-264 59-72 (85)
71 2kpn_A Bacillolysin; solution 50.4 30 0.001 26.1 5.4 41 239-312 51-91 (103)
72 3ead_A Na/Ca exchange protein; 49.0 95 0.0032 24.3 8.9 46 174-222 2-47 (137)
73 2y72_A Collagenase, collagenas 40.2 62 0.0021 22.9 5.7 31 136-170 54-84 (85)
74 3ead_A Na/Ca exchange protein; 36.0 1.5E+02 0.0053 23.0 8.8 25 166-191 108-132 (137)
75 4a2l_A BT_4663, two-component 29.8 1.8E+02 0.0063 29.6 9.4 56 200-264 712-767 (795)
76 3ott_A Two-component system se 25.8 2.2E+02 0.0074 28.8 9.0 48 209-264 686-733 (758)
77 2y6h_A Xylanase, CBM4-2; hydro 23.8 2.3E+02 0.008 21.5 6.4 24 38-71 37-60 (167)
78 1u2c_A Dystroglycan; IG-like d 23.6 2.8E+02 0.0097 24.2 7.8 35 223-263 46-80 (246)
79 3gin_A Sodium/calcium exchange 20.9 3.3E+02 0.011 21.9 10.9 58 162-222 9-66 (160)
No 1
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.3e-53 Score=433.67 Aligned_cols=312 Identities=23% Similarity=0.292 Sum_probs=278.1
Q ss_pred eeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEc
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGAD 74 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D 74 (383)
+.+++.||||++..|.|++.|.| ..+.+.|.|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|
T Consensus 60 l~~~~~LDrE~~~~y~l~v~a~d~~~~~~~~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--~~~~Gt~v~~v~A~D 134 (550)
T 3q2v_A 60 LKVTQPLDREAIAKYILYSHAVSSNGEAVEDPMEIVITVTDQNDNRPEFT---QEVFEGSVAE--GAVPGTSVMKVSATD 134 (550)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTSCBCSCCEEEEEEEECCSCCCCCBS---CSEEEEEEET--TCCTTCEEEECCBCC
T ss_pred EEECCccCcccCCeeEEEEEEEeCCCCcccceEEEEEEEEecCCCCCccC---CCceEEEEeC--CCCCCCEEEEEEEEe
Confidence 56789999999999999999988 346788888777 9999998 8899999999 999999999999999
Q ss_pred CCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCC--CCCCcEEEEeecceEEEEE-cccCCCCCCcEEEEEEEEEe
Q psy11780 75 PDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDG--DEKDLFSISTVNGKGVIKL-IGKLDYENKFLYQLKILAVD 151 (383)
Q Consensus 75 ~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~--~~~~~F~I~~~t~~G~I~~-~~~LD~E~~~~~~l~V~a~D 151 (383)
+|.+. .+.|+.++|+|....+ ...+.|.|++.+ |.|++ .++||||....|.|.|+|+|
T Consensus 135 ~D~g~-----------------~~~N~~i~Ysi~~~~~~~~~~~~F~id~~t--G~i~~~~~~LDrE~~~~y~l~V~A~D 195 (550)
T 3q2v_A 135 ADDDV-----------------NTYNAAIAYTIVSQDPELPHKNMFTVNRDT--GVISVLTSGLDRESYPTYTLVVQAAD 195 (550)
T ss_dssp CSCTT-----------------TCGGGCCEEEEEEEESCCSSSCSEEECTTT--CEEEECSSCCCTTTCSEEEEEEEEES
T ss_pred CCCCC-----------------CCcceEEEEEEecCCCCCCcCCceEEcCCC--eEEEEccCCCCcccCcEEEEEEEEEc
Confidence 99851 0247799999965332 235799999988 99987 58999999999999999999
Q ss_pred CCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCc--eEEEEEecCCcccEEEe
Q psy11780 152 RSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINN--KILYSISSGSQGIFDID 229 (383)
Q Consensus 152 ~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~--~i~y~i~~~~~~~F~Id 229 (383)
.|++ .+++++.|+|+|.|+|||+|.|.+..|.+.|+|+ ++|+.|+++.|+|+|.+.++ .++|+|.+...++|.|+
T Consensus 196 ~g~~--~~s~t~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~g~~v~~v~a~D~D~~~n~~~~~~ysi~~~~~~~F~i~ 272 (550)
T 3q2v_A 196 LQGE--GLSTTAKAVITVKDINDNAPVFNPSTYQGQVPEN-EVNARIATLKVTDDDAPNTPAWKAVYTVVNDPDQQFVVV 272 (550)
T ss_dssp GGGT--SCCCEEEEEEEEECCSCSCCEESSSEEEEEEESS-CSSCCCEEECEECCSCTTSTTTCEEEEESSCSSCCEEEE
T ss_pred CCCC--CeeEEEEEEEEecccCCCCCEEecceeEEEEecC-CCCCEEEEEEEEECCCCCCCcEEEEEEEEeCCCCcEEEE
Confidence 8776 5788999999999999999999999999999999 99999999999999998777 46699998668899998
Q ss_pred ----CCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEe
Q psy11780 230 ----PNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIIT 305 (383)
Q Consensus 230 ----~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~ 305 (383)
+.+|.|++.++||||.... |.|.|+|+|++.. ..+.++++++|+|+|.
T Consensus 273 ~d~~~~tG~i~~~~~LD~E~~~~----y~l~V~a~D~~~~------------------------~~~~~~~~~~v~I~V~ 324 (550)
T 3q2v_A 273 TDPTTNDGILKTAKGLDFEAKQQ----YILHVRVENEEPF------------------------EGSLVPSTATVTVDVV 324 (550)
T ss_dssp ECTTTCCEEEEESSCCCTTTCSE----EEEEEEEEESSCC------------------------CSSCCCEEEEEEEEEE
T ss_pred ecCCCccEEEEecccCCccccce----EEEEEEEEeCCCC------------------------CCCccceEEEEEEEEE
Confidence 7899999999999999876 9999999998740 1145789999999999
Q ss_pred ecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCC-CccEEEecccEEEE
Q psy11780 306 DVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGD-MGTFEITPQKIINE 375 (383)
Q Consensus 306 DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~-~~~F~I~~~tG~~~ 375 (383)
|+|| +|.|....|.+.|+|++++|+.|+++. |+|+|.|.|+.++|+|.++ .++|.|++.+|.-.
T Consensus 325 DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~-----A~D~D~g~n~~i~y~i~~~~~~~f~id~~tG~i~ 389 (550)
T 3q2v_A 325 DVNE-APIFMPAERRVEVPEDFGVGQEITSYT-----AREPDTFMDQKITYRIWRDTANWLEINPETGAIF 389 (550)
T ss_dssp CCCC-CCEESSSSCEEEEETTCCSSCEEEECC-----EECCCCSTTCCCEEEEEECTTCCEEECTTTCEEE
T ss_pred ecCC-CCeEcCcceEEEEecCCCCCCEEEEEe-----CCCCCCCCCCCEEEEEecCCCCcEEEeCCCcEEE
Confidence 9999 999999999999999999999999998 9999999999999999654 68999999999754
No 2
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=9e-54 Score=436.11 Aligned_cols=312 Identities=23% Similarity=0.326 Sum_probs=277.4
Q ss_pred eeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEc
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGAD 74 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D 74 (383)
+.+++.||||++..|.|+|.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|
T Consensus 66 l~~~~~LDrE~~~~y~l~v~A~D~~~~~~~~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n~~~gt~v~~v~A~D 140 (546)
T 1l3w_A 66 MLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFT---QDVFRGSVRE--GVQPGTQVMAVSATD 140 (546)
T ss_dssp EEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEES---SSCEEEEEET--TCCSSEEEEECCEEC
T ss_pred EEECCcCCcccCceEEEEEEEEeCCCCcccceEEEEEEEEecccCcCEec---CceeEEEEEC--CCCCCCEEEEEEEEc
Confidence 56789999999999999999998 237888888887 8999998 8899999999 999999999999999
Q ss_pred CCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCC--CCCcEEEEeecceEEEEEc-ccCCCCCCcEEEEEEEEEe
Q psy11780 75 PDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGD--EKDLFSISTVNGKGVIKLI-GKLDYENKFLYQLKILAVD 151 (383)
Q Consensus 75 ~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~--~~~~F~I~~~t~~G~I~~~-~~LD~E~~~~~~l~V~a~D 151 (383)
+|.+. ...|++++|+|....+. ..++|.|++.+ |.|++. ++||||....|.|.|+|+|
T Consensus 141 ~D~g~-----------------~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~t--G~i~~~~~~LD~E~~~~y~l~V~A~D 201 (546)
T 1l3w_A 141 EDDNI-----------------DSLNGVLSYSILKQDPEEPIPNLFTINRET--GVISLIGTGLDREKFPEYTLTVQATD 201 (546)
T ss_dssp CSCCS-----------------SSSTTCCEEEEEEESSCCSCSCSEEECTTT--CEEEECSCCCCTTTCCEEEEEEEEEH
T ss_pred CCCCC-----------------CCCCCEEEEEEeCCCCCcccCCcEEEeCCC--ceEEEeccCCCcccCceEEEEEEEEE
Confidence 99840 01367899999653321 35799999988 999985 7999999999999999999
Q ss_pred CCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCC--CCCCceEEEEEecCCcccEEEe
Q psy11780 152 RSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGD--RGINNKILYSISSGSQGIFDID 229 (383)
Q Consensus 152 ~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D--~~~n~~i~y~i~~~~~~~F~Id 229 (383)
.+++ .+++++.|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+| .+.|+.++|+|.+...++|.|+
T Consensus 202 ~g~~--~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~v~~v~A~D~D~~~g~n~~v~y~i~~~~~~~F~I~ 278 (546)
T 1l3w_A 202 LEGA--GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNIT 278 (546)
T ss_dssp HHHT--SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEE
T ss_pred CCCC--CcceEEEEEEEEeecCCCCCccccccceEEEEeC-CCCCEEEEEEEEeCCCCCCCCcEEEEEEEeCCCceEEEE
Confidence 9876 5789999999999999999999999999999999 999999999999999 6789999999987457899996
Q ss_pred --C--CCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEe
Q psy11780 230 --P--NTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIIT 305 (383)
Q Consensus 230 --~--~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~ 305 (383)
+ .+|.|++.++||||.... |.|.|+|+|+++. ..+.++++++|+|+|.
T Consensus 279 ~d~~~~~G~i~~~~~LD~E~~~~----y~l~V~a~D~~~~------------------------~~~~~s~~~~v~I~V~ 330 (546)
T 1l3w_A 279 TDPESNQGILTTAKGLDFELRKQ----YVLQITVENAEPF------------------------SVPLPTSTATVTVTVE 330 (546)
T ss_dssp ECTTTCCEEEEESSCCCCSSCCC----EEEEECCEESSCC------------------------SSCCCCCCEEEEEEEE
T ss_pred ecCCCCeEEEEECccCCcccccE----EEEEEEEEECCCC------------------------CCCCcceeEEEEEEEE
Confidence 2 689999999999999887 9999999998740 1145789999999999
Q ss_pred ecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCC-CccEEEecccEEEE
Q psy11780 306 DVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGD-MGTFEITPQKIINE 375 (383)
Q Consensus 306 DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~-~~~F~I~~~tG~~~ 375 (383)
|+|| +|.|.+..|.+.|+|++++|+.++++. |+|+|.|.|+.++|+|.++ .++|.|++.+|.-.
T Consensus 331 DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~-----A~D~D~g~n~~i~ysi~~~~~~~F~Id~~tG~i~ 395 (546)
T 1l3w_A 331 DVNE-APFFVPAVSRVDVSEDLSRGEKIISLV-----AQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVT 395 (546)
T ss_dssp CCCC-CCEESSCEECCCBCTTCCSSEEEEECC-----EECCCTTCCCCEEEEECCCSSCCCEEETTTTEEE
T ss_pred cCCC-CCcEecceEEEEEeCCCCCCCEEEEEE-----EECCCCCCCceEEEEECCCCCCcEEEeCCcEEEE
Confidence 9999 999999999999999999999999998 9999999999999999764 68999999998643
No 3
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=6.3e-53 Score=431.19 Aligned_cols=316 Identities=22% Similarity=0.289 Sum_probs=276.7
Q ss_pred eeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEc
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGAD 74 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D 74 (383)
+.+.+.||||++..|.|++.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|
T Consensus 60 l~~~~~LDrE~~~~y~l~v~a~D~g~~~~~~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n~~~Gt~v~~v~A~D 134 (559)
T 3q2w_A 60 LSVTKPLDRELIARFHLRAHAVDINGNQVENPIDIVINVIDMNDNRPEFL---HQVWNGSVPE--GSKPGTYVMTVTAID 134 (559)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTSCEEEEEEEEEEEEECCCCCCCEES---CSEEEEEEET--TCCTTCEEEECCEEC
T ss_pred EEECCccCCCCCceEEEEEEEEECCCCccceeEEEEEEEEeCCCCCCccC---CCeeEEEEeC--CCCCCcEEEEEEEEc
Confidence 46789999999999999999988 346788888777 9999998 8899999999 999999999999999
Q ss_pred CCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCC--CCCcEEEEeecceEEEEEcc-cCCCCCCcEEEEEEEEEe
Q psy11780 75 PDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGD--EKDLFSISTVNGKGVIKLIG-KLDYENKFLYQLKILAVD 151 (383)
Q Consensus 75 ~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~--~~~~F~I~~~t~~G~I~~~~-~LD~E~~~~~~l~V~a~D 151 (383)
+|.+. +.|++++|+|...... ..+.|.|++.+ |.|++.+ +||||+...|.|.|+|+|
T Consensus 135 ~D~g~------------------~~n~~v~Ysi~~~~~~~~~~~~F~Id~~t--G~i~~~~~~LD~E~~~~y~l~V~A~D 194 (559)
T 3q2w_A 135 ADDPN------------------ALNGMLRYRILSQAPSTPSPNMFTINNET--GDIITVAAGLDREKVQQYTLIIQATD 194 (559)
T ss_dssp SSCTT------------------SGGGCCEEEEEEEESCCSCTTCEEECTTT--CEEEECCSCCCTTTCCEEEEEEEEEH
T ss_pred CCCCC------------------CCceEEEEEEecCCCCCCCcceEEEeCCc--eEEEEEeccCCcccCCEEEEEEEEEE
Confidence 99852 3577999999643221 13789999988 9999988 999999999999999999
Q ss_pred CCC-CCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCC--CceEEEEEecCC-cccEE
Q psy11780 152 RSN-NDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGI--NNKILYSISSGS-QGIFD 227 (383)
Q Consensus 152 ~~~-~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~--n~~i~y~i~~~~-~~~F~ 227 (383)
.++ +.+.++++++|+|+|.|+|||+|.|....|.+.|+|+. +|+.++++.|+|+|.+. |+.++|+|.++. .++|.
T Consensus 195 ~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~~~~y~~~V~En~-~g~~v~~v~a~D~D~~~~~n~~~~y~i~~g~~~~~F~ 273 (559)
T 3q2w_A 195 MEGNPTYGLSNTATAVITVTDVNDNPPEFTAMTFYGEVPENR-VDVIVANLTVTDKDQPHTPAWNAAYRISGGDPTGRFA 273 (559)
T ss_dssp HHHCTTTCCEEEEEEEEEEECCSCSCCEESSSEEEEEEESSC-SSEEEEEEEEECCSCTTSTTTSBCCEEEESCTTCCEE
T ss_pred CCCCCCCCccceEEEEEEEEeCCCCCCccccccceeEecCCC-CCcEEEEEEEEcCCCCCCCceeEEEEEecCCCCCceE
Confidence 865 32357899999999999999999999999999999997 89999999999999965 668999998765 78999
Q ss_pred E----eCCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEE
Q psy11780 228 I----DPNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTII 303 (383)
Q Consensus 228 I----d~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~ 303 (383)
| ++.+|.|++.++||||.... |.|+|.|+|.+... .+..++++++++|+|+
T Consensus 274 I~~~~~~~~G~i~~~~~LD~E~~~~----y~l~V~A~D~~~~~---------------------~g~~~~~~s~~~v~I~ 328 (559)
T 3q2w_A 274 ILTDPNSNDGLVTVVKPIDFETNRM----FVLTVAAENQVPLA---------------------KGIQHPPQSTATVSVT 328 (559)
T ss_dssp EEECTTTCEEEEEECSCCCTTTCSE----EEEEEECCBSSCCC---------------------TTCCCCGGGEEEEEEE
T ss_pred EEecCCCCcEEEEeCCCCCCccCce----EEEEEEEEcCCccc---------------------cCCCCCCceEEEEEEE
Confidence 9 57899999999999999876 99999999986300 0012568999999999
Q ss_pred EeecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCC-CccEEEecccEEEE
Q psy11780 304 ITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGD-MGTFEITPQKIINE 375 (383)
Q Consensus 304 V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~-~~~F~I~~~tG~~~ 375 (383)
|.|+|| +|.|.+..|.+.|+|++++|+.|+++. |+|+|.|.|+.++|+|.++ .++|.|++.+|.-.
T Consensus 329 V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~-----A~D~D~g~n~~i~Ysi~~~~~~~f~Id~~tG~i~ 395 (559)
T 3q2w_A 329 VIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLT-----AQDPDRYMQQNIRYTKLSDPANWLKIDPVNGQIT 395 (559)
T ss_dssp EECCCC-CCEESSSEEEEEEESCCCTTCEEEECC-----EECSCSSSCCCEEEEEEECTTCCEEECTTTCEEE
T ss_pred EEeCCC-CCcccccceEEEEeCCCCCCCEEEEEE-----EECCCCCCCCceEEEEccCCccceEecCCceEEE
Confidence 999999 699999999999999999999999998 9999999999999999654 68999999999754
No 4
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=7.2e-52 Score=409.39 Aligned_cols=300 Identities=22% Similarity=0.356 Sum_probs=263.6
Q ss_pred eeccccccceee---eeEEEEeeeeee----------eeEEEEEeecC-CCCCeEEeCCCee--EEEEEecCCCCCCCeE
Q psy11780 3 NLLNAGVNRVKE---KHVLLIGTYLLL----------SAILVDSSVSG-NRAPRFIIDEQTE--IVIRLKEGPDTPAGTF 66 (383)
Q Consensus 3 ~~~~~~lD~E~~---~~~~l~~~~~~~----------~~~~~i~v~~~-Dn~P~F~~~~~~~--~~~~v~E~~~~~~g~~ 66 (383)
+.+++.||||+. +.|.+.|.|.|. .+.++|.|.|. ||+|+|. +.. |.+.|+| ++++|+.
T Consensus 57 i~~~~~LD~E~~~~~~~~~~~V~a~d~g~~~~~~~~~~~~v~I~V~DvNDn~P~F~---~~~~~~~~~v~E--~~~~gt~ 131 (419)
T 3ubh_A 57 VRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFI---NRPLPMQAVVQL--NAPPNTP 131 (419)
T ss_dssp EEESSCCCGGGSCTTCEEEEEEEEEC--CCSSSCCEEEEEEEEEEECCCCSCCEEC---CSSSSCEEEECT--TCCTTCE
T ss_pred EEECCccCccccCccceEEEEEEEEeCCCCCCCCCcceEEEEEEEEECCCCCCccc---CCCCcEEEEEeC--CCCCCCE
Confidence 467899999998 799999999883 37888998887 9999998 554 7899999 9999999
Q ss_pred EEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEEEEcccCCCCCCcEEEEE
Q psy11780 67 IYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVIKLIGKLDYENKFLYQLK 146 (383)
Q Consensus 67 i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~ 146 (383)
|+++.|+|+|.+. .++|+|. .++..+.|.|++.+ |.|++.++||||....|.|+
T Consensus 132 v~~v~A~D~D~g~----------------------n~~y~i~--~~~~~~~F~I~~~t--G~i~~~~~ld~e~~~~y~l~ 185 (419)
T 3ubh_A 132 VFTLQARDPDTDH----------------------NIHYFIV--RDRTGGRFEVDERS--GVVRTRGTDLFQLDMEYVLY 185 (419)
T ss_dssp EEECCEECSSTTC----------------------CEEEEEE--EESSSSCEEECTTT--CEEEECSSSCCCBTCEEEEE
T ss_pred EEEEEEECCCCCc----------------------eeEEEEE--eCCCCCeEEEeCCc--eEEEEecccccccccEEEEE
Confidence 9999999999854 3889994 34556899999988 99999999999999999999
Q ss_pred EEEEeCCCC--CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEec--CC
Q psy11780 147 ILAVDRSNN--DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISS--GS 222 (383)
Q Consensus 147 V~a~D~~~~--~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~--~~ 222 (383)
|+|+|.+++ .+.+++++.++|.|.| |||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| |+.++|+|.. ..
T Consensus 186 V~A~D~g~~~~~~~~~~t~~v~I~V~d-ndn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~d---n~~i~Ysi~~~~~~ 261 (419)
T 3ubh_A 186 VKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQG 261 (419)
T ss_dssp EEEEEEEEEC--CCEEECCCEEEEEEE-SCCCCEESSSCEEEEEETTCCTTCEEEECCEECSS---CCCCEEEEEESSSC
T ss_pred EEEEECCCCccCcccccceEEEEEEEC-CCCCCceecCeeEEEecCCCCCCcEEEEEEEecCC---CCceEEEEecCCCC
Confidence 999998763 2245778889999999 99999999999999999999999999999999987 6889999963 34
Q ss_pred cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEE
Q psy11780 223 QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTI 302 (383)
Q Consensus 223 ~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I 302 (383)
.++|.|++.+|.|++.++||||.... ...|.|.|.|+|.++ .+++++.|+|
T Consensus 262 ~~~F~I~~~tG~i~~~~~LD~E~~~~-~~~y~l~V~a~dd~~----------------------------~~s~~~~v~I 312 (419)
T 3ubh_A 262 AGTFNIGPTSGIVKLAKELDFEDLRQ-PHVYSLIVTATEDSG----------------------------GFSTSVDLTI 312 (419)
T ss_dssp CSSEEECTTTCEEEECSCCCTTCTTS-CSEEEEEEEEECTTT----------------------------SCEEEEEEEE
T ss_pred CCcEEEECCCCEEEECcccCcccccc-ccEEEEEEEEEeCCC----------------------------CcEEEEEEEE
Confidence 78999999999999999999998641 134999999997543 3788999999
Q ss_pred EEeecCCCCCcccCCceEE-EEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCCCccEEEecccEEE
Q psy11780 303 IITDVNDETPTFRSPRYVA-EIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGDMGTFEITPQKIIN 374 (383)
Q Consensus 303 ~V~DvNDn~P~f~~~~y~~-~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~~~~F~I~~~tG~~ 374 (383)
+|.|+|||+|.|..+.|.+ .|+|++++|+.|+++. |+|+|.|.|+.++|+|.+ ++|.|++ +|.-
T Consensus 313 ~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~-----A~D~D~g~n~~v~Y~i~~--~~F~Id~-~G~i 377 (419)
T 3ubh_A 313 RVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVK-----AMDSDSGSNAEIEYLVSD--DHFAVDS-NGII 377 (419)
T ss_dssp EEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECC-----EECSSCGGGGCEEEEESC--TTEEECT-TCEE
T ss_pred EEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEE-----EEeCCCCCCCEEEEEEcC--CcEEECC-CeEE
Confidence 9999999999999999987 7999999999999998 999999999999999964 4899998 7754
No 5
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=5.7e-52 Score=442.30 Aligned_cols=312 Identities=23% Similarity=0.326 Sum_probs=277.9
Q ss_pred eeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEc
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGAD 74 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D 74 (383)
+.+.+.||||+++.|.|++.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|
T Consensus 215 l~~~~~LDrE~~~~y~l~v~A~D~g~~~~~~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n~~~Gt~V~~v~AtD 289 (880)
T 1q55_A 215 MLVTRPLDREEYDKYVLSSHAVSENGSPVEEPMEITINVIDQNDNRPKFT---QDVFRGSVRE--GVQPGTQVMAVSATD 289 (880)
T ss_dssp EEECSCCCTTTCCEEEEEEEEEESSSCBCSCCEEEEEEEECCSCCCCEES---SSCEEEEEET--TCCSSEEEEECCEEC
T ss_pred EEECCccCccccCccEEEEEEEECCCCceeeeEEEEEEEEecCCCCCCcc---CCcEEEEEeC--CCCCCceeEEEEEEc
Confidence 56789999999999999999998 347888888777 8999998 8899999999 999999999999999
Q ss_pred CCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCC--CCCcEEEEeecceEEEEEc-ccCCCCCCcEEEEEEEEEe
Q psy11780 75 PDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGD--EKDLFSISTVNGKGVIKLI-GKLDYENKFLYQLKILAVD 151 (383)
Q Consensus 75 ~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~--~~~~F~I~~~t~~G~I~~~-~~LD~E~~~~~~l~V~a~D 151 (383)
+|.+. .+.|++++|+|....+. ..+.|.|++.+ |.|++. ++||||....|.|.|+|+|
T Consensus 290 ~D~g~-----------------~~~N~~v~Ysi~~~~~~~~~~~~F~Id~~t--G~I~~~~~~LDrE~~~~y~l~V~A~D 350 (880)
T 1q55_A 290 EDDNI-----------------DSLNGVLSYSILKQDPEEPIPNLFTINRET--GVISLIGTGLDREKFPEYTLTVQATD 350 (880)
T ss_dssp CSCCS-----------------SSSTTCCEEEEEEESSCCSCSCSEEECTTT--CEEEECSCCCCTTTCCEEEEEEEEEH
T ss_pred CCCCC-----------------CCcCcEEEEEEcCCCCCcccCCeEEEccCC--ccEEEecccCCHHHcceeEEEEEEEE
Confidence 99841 01467999999653321 35799999988 999985 7899999999999999999
Q ss_pred CCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCC--CCCCceEEEEEecCCcccEEEe
Q psy11780 152 RSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGD--RGINNKILYSISSGSQGIFDID 229 (383)
Q Consensus 152 ~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D--~~~n~~i~y~i~~~~~~~F~Id 229 (383)
.+++ .++++++|+|+|.|+|||+|.|....|.+.|+|+ ++|+.|+++.|+|+| .+.|+.++|+|.++..++|.|+
T Consensus 351 ~g~~--~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~V~En-~~gt~V~~v~A~D~D~~~g~n~~v~Ysi~~~~~~~F~I~ 427 (880)
T 1q55_A 351 LEGA--GLSVEGKAIIQITDANDNAPIFDPKTYTALVPEN-EIGFEVQRLSVTDLDMPGTPAWQAVYKIRVNEGGFFNIT 427 (880)
T ss_dssp HHHT--SCEEECCEEEEEECCCCCCCCBSCSEEEEEEESS-SCCCEEEEECBCCCSCTTSTTSCEECCBSCCTTSCEEEE
T ss_pred CCCC--CccceeEEEEEEEeccCCCCCccccceEEEeecC-CCCcEEEEEEEECCCCCCCCCceEEEEEecCCCceEEEE
Confidence 9876 5789999999999999999999999999999999 999999999999999 6789999999987557899995
Q ss_pred --C--CCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEe
Q psy11780 230 --P--NTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIIT 305 (383)
Q Consensus 230 --~--~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~ 305 (383)
+ .+|.|++.++||||.... |.|+|+|+|.+.. ..+.++++++|+|+|.
T Consensus 428 ~d~~~~~G~i~~~~~LD~E~~~~----y~l~V~A~D~~~~------------------------~~~~~sst~tV~I~V~ 479 (880)
T 1q55_A 428 TDPESNQGILTTAKGLDFELRKQ----YVLQITVENAEPF------------------------SVPLPTSTATVTVTVE 479 (880)
T ss_dssp ECTTTCCEEEEESSCCCCSSCCC----EEEEECCEESSCC------------------------SSCCCCCCEEEEEEEE
T ss_pred ecCCCceEEEecccCCCcccCCc----EEEEEEEEECCCC------------------------CCCCcceeEEEEEEEE
Confidence 3 579999999999999887 9999999998740 1145789999999999
Q ss_pred ecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCC-CccEEEecccEEEE
Q psy11780 306 DVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGD-MGTFEITPQKIINE 375 (383)
Q Consensus 306 DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~-~~~F~I~~~tG~~~ 375 (383)
|+|| +|+|.+..|.+.|+|++++|+.|+++. |+|+|.|.|+.++|+|.++ .++|.|++.+|...
T Consensus 480 DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~-----A~D~D~g~n~~v~Ysi~~~~~~~F~Id~~tG~I~ 544 (880)
T 1q55_A 480 DVNE-APFFVPAVSRVDVSEDLSRGEKIISLV-----AQDPDKQQIQKLSYFIGNDPARWLTVNKDNGIVT 544 (880)
T ss_dssp CCCC-CCEESSCEECCCBCTTCCSSEEEEECC-----EECCCTTCCCCEEEEECCCSSCCCEEETTTTEEE
T ss_pred eCCC-CCEEecCceEEEEeCCCCCCCEEEEEE-----EEeCCCCCCCcEEEEECCCCCCCEEEeCCccEEE
Confidence 9999 999999999999999999999999998 9999999999999999764 68999999999754
No 6
>3q2w_A Cadherin-2; cell adhesion, calcium binding; HET: MAN NAG; 3.20A {Mus musculus}
Probab=100.00 E-value=1.3e-50 Score=414.16 Aligned_cols=309 Identities=24% Similarity=0.327 Sum_probs=268.9
Q ss_pred eeeccccccceeeeeEEEEeeeee----------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEE
Q psy11780 2 INLLNAGVNRVKEKHVLLIGTYLL----------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRL 70 (383)
Q Consensus 2 ~~~~~~~lD~E~~~~~~l~~~~~~----------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v 70 (383)
|.++.+.||||+++.|.|+|.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| +. +|+.|+++
T Consensus 171 i~~~~~~LD~E~~~~y~l~V~A~D~~g~p~~~~s~t~~v~I~V~DvNDn~P~f~---~~~y~~~V~E--n~-~g~~v~~v 244 (559)
T 3q2w_A 171 IITVAAGLDREKVQQYTLIIQATDMEGNPTYGLSNTATAVITVTDVNDNPPEFT---AMTFYGEVPE--NR-VDVIVANL 244 (559)
T ss_dssp EEECCSCCCTTTCCEEEEEEEEEHHHHCTTTCCEEEEEEEEEEECCSCSCCEES---SSEEEEEEES--SC-SSEEEEEE
T ss_pred EEEEeccCCcccCCEEEEEEEEEECCCCCCCCccceEEEEEEEEeCCCCCCccc---cccceeEecC--CC-CCcEEEEE
Confidence 334445999999999999999988 347888998887 9999998 8899999999 76 89999999
Q ss_pred EEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEee--cceEEEEEcccCCCCCCcEEEEEEE
Q psy11780 71 RGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTV--NGKGVIKLIGKLDYENKFLYQLKIL 148 (383)
Q Consensus 71 ~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~--t~~G~I~~~~~LD~E~~~~~~l~V~ 148 (383)
.|+|+|.+. +.|++++|+| ..++..+.|.|... +.+|.|++.++||||....|.|+|.
T Consensus 245 ~a~D~D~~~------------------~~n~~~~y~i--~~g~~~~~F~I~~~~~~~~G~i~~~~~LD~E~~~~y~l~V~ 304 (559)
T 3q2w_A 245 TVTDKDQPH------------------TPAWNAAYRI--SGGDPTGRFAILTDPNSNDGLVTVVKPIDFETNRMFVLTVA 304 (559)
T ss_dssp EEECCSCTT------------------STTTSBCCEE--EESCTTCCEEEEECTTTCEEEEEECSCCCTTTCSEEEEEEE
T ss_pred EEEcCCCCC------------------CCceeEEEEE--ecCCCCCceEEEecCCCCcEEEEeCCCCCCccCceEEEEEE
Confidence 999999853 2355789999 44677889999642 3459999999999999999999999
Q ss_pred EEeCCCC----CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcc
Q psy11780 149 AVDRSNN----DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQG 224 (383)
Q Consensus 149 a~D~~~~----~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~ 224 (383)
|+|.+.. .+.++++++|+|.|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.+.|+.++|+|.++..+
T Consensus 305 A~D~~~~~~g~~~~~~s~~~v~I~V~DvND-~P~f~~~~~~~~v~En~~~g~~v~~v~A~D~D~g~n~~i~Ysi~~~~~~ 383 (559)
T 3q2w_A 305 AENQVPLAKGIQHPPQSTATVSVTVIDVNE-NPYFAPNPKIIRQEEGLHAGTMLTTLTAQDPDRYMQQNIRYTKLSDPAN 383 (559)
T ss_dssp CCBSSCCCTTCCCCGGGEEEEEEEEECCCC-CCEESSSEEEEEEESCCCTTCEEEECCEECSCSSSCCCEEEEEEECTTC
T ss_pred EEcCCccccCCCCCCceEEEEEEEEEeCCC-CCcccccceEEEEeCCCCCCCEEEEEEEECCCCCCCCceEEEEccCCcc
Confidence 9997531 1246889999999999999 6999999999999999999999999999999999999999999987789
Q ss_pred cEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEE
Q psy11780 225 IFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIII 304 (383)
Q Consensus 225 ~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V 304 (383)
+|.|++.+|.|++.+.||||........|.|+|.|+|+|. |+++++++|.|+|
T Consensus 384 ~f~Id~~tG~i~~~~~lDrE~~~~~~~~y~l~V~A~D~g~---------------------------p~~ss~~~v~I~V 436 (559)
T 3q2w_A 384 WLKIDPVNGQITTIAVLDRESPNVKNNIYNATFLASDNGI---------------------------PPMSGTGTLQIYL 436 (559)
T ss_dssp CEEECTTTCEEEESSCCCSSSTTSCSSEEEEEEEEEECSS---------------------------SCCEEEEEEEEEE
T ss_pred ceEecCCceEEEEccccCcccccccCCEEEEEEEEEcCCC---------------------------CcceEEEEEEEEE
Confidence 9999999999999999999976322345999999999998 8899999999999
Q ss_pred eecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCe-EEEEEEeCC----CccEEEecccEE
Q psy11780 305 TDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNG-TFQMFIEGD----MGTFEITPQKII 373 (383)
Q Consensus 305 ~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~-~i~y~l~~~----~~~F~I~~~tG~ 373 (383)
.|+|||+|.|.... ..++|+ .+..++++. |+|+|.|.|+ .++|+|... .+.|+|++.+|.
T Consensus 437 ~DvNDn~P~f~~~~--~~v~e~--~~~~v~~v~-----A~D~D~~~n~~~~~ysl~~~~~~~~~~f~i~~~~G~ 501 (559)
T 3q2w_A 437 LDINDNAPQVLPQE--AETCET--PEPNSINIT-----ALDYDIDPNAGPFAFDLPLSPVTIKRNWTINRLNGD 501 (559)
T ss_dssp ECCSCCCCEESCTT--CCCCSC--CCTTCEEEC-----EECSCCTTSSSSCEEECCSSSHHHHHHEEEEECSSS
T ss_pred EEccCCCCcccCCc--eEEeec--CCCcEEEEE-----EEcCCCCCCCCCEEEEEcCCCCccCCCeEEEecCCC
Confidence 99999999998764 457888 455677888 9999999988 799999742 568999998886
No 7
>3q2v_A Cadherin-1; cell adhesion, calcium binding; HET: MAN; 3.40A {Mus musculus}
Probab=100.00 E-value=2.4e-49 Score=403.93 Aligned_cols=306 Identities=25% Similarity=0.334 Sum_probs=262.8
Q ss_pred eeeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEE
Q psy11780 2 INLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGA 73 (383)
Q Consensus 2 ~~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~ 73 (383)
|.++.++||||+++.|.|+|+|.| +.+.++|.|.|. ||+|+|. +..|.++|+| + ++|+.|+++.|+
T Consensus 172 i~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~t~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n-~~g~~v~~v~a~ 245 (550)
T 3q2v_A 172 ISVLTSGLDRESYPTYTLVVQAADLQGEGLSTTAKAVITVKDINDNAPVFN---PSTYQGQVPE--N-EVNARIATLKVT 245 (550)
T ss_dssp EEECSSCCCTTTCSEEEEEEEEESGGGTSCCCEEEEEEEEECCSCSCCEES---SSEEEEEEES--S-CSSCCCEEECEE
T ss_pred EEEccCCCCcccCcEEEEEEEEEcCCCCCeeEEEEEEEEecccCCCCCEEe---cceeEEEEec--C-CCCCEEEEEEEE
Confidence 345678999999999999999999 568999999887 8999998 8899999999 8 999999999999
Q ss_pred cCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEee--cceEEEEEcccCCCCCCcEEEEEEEEEe
Q psy11780 74 DPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTV--NGKGVIKLIGKLDYENKFLYQLKILAVD 151 (383)
Q Consensus 74 D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~--t~~G~I~~~~~LD~E~~~~~~l~V~a~D 151 (383)
|+|.+. +.+.+++|+|.. +..+.|.|+.+ +++|.|++.++||||....|.|.|+|+|
T Consensus 246 D~D~~~------------------n~~~~~~ysi~~---~~~~~F~i~~d~~~~tG~i~~~~~LD~E~~~~y~l~V~a~D 304 (550)
T 3q2v_A 246 DDDAPN------------------TPAWKAVYTVVN---DPDQQFVVVTDPTTNDGILKTAKGLDFEAKQQYILHVRVEN 304 (550)
T ss_dssp CCSCTT------------------STTTCEEEEESS---CSSCCEEEEECTTTCCEEEEESSCCCTTTCSEEEEEEEEEE
T ss_pred ECCCCC------------------CCcEEEEEEEEe---CCCCcEEEEecCCCccEEEEecccCCccccceEEEEEEEEe
Confidence 999853 112257799953 56789999842 2349999999999999999999999999
Q ss_pred CCCC-CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeC
Q psy11780 152 RSNN-DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDP 230 (383)
Q Consensus 152 ~~~~-~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~ 230 (383)
.++. .+.+++++.|+|+|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.++..++|.|++
T Consensus 305 ~~~~~~~~~~~~~~v~I~V~DvND-~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~i~y~i~~~~~~~f~id~ 383 (550)
T 3q2v_A 305 EEPFEGSLVPSTATVTVDVVDVNE-APIFMPAERRVEVPEDFGVGQEITSYTAREPDTFMDQKITYRIWRDTANWLEINP 383 (550)
T ss_dssp SSCCCSSCCCEEEEEEEEEECCCC-CCEESSSSCEEEEETTCCSSCEEEECCEECCCCSTTCCCEEEEEECTTCCEEECT
T ss_pred CCCCCCCccceEEEEEEEEEecCC-CCeEcCcceEEEEecCCCCCCEEEEEeCCCCCCCCCCCEEEEEecCCCCcEEEeC
Confidence 8742 1246889999999999999 9999999999999999999999999999999999999999999887789999999
Q ss_pred CCceEEEcccCCccccc-CCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCC
Q psy11780 231 NTGNIFTLKELDRESAT-SNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVND 309 (383)
Q Consensus 231 ~tG~i~~~~~lD~E~~~-~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvND 309 (383)
.+|.|++.++||||... ..+..|.|+|.|+|+|. |+++++++|.|+|.|+||
T Consensus 384 ~tG~i~~~~~lDrE~~~~~~~~~y~l~V~A~D~g~---------------------------p~~s~~~~v~I~V~DvND 436 (550)
T 3q2v_A 384 ETGAIFTRAEMDREDAEHVKNSTYVALIIATDDGS---------------------------PIATGTGTLLLVLLDVND 436 (550)
T ss_dssp TTCEEEECSCCCTTCTTTCCSSEEEEEEEEECCSS---------------------------SCCCEEEEEEEEEECCCC
T ss_pred CCcEEEECCccCcccccccCCCEEEEEEEEEeCCC---------------------------CcceeEEEEEEEEEeCCC
Confidence 99999999999999871 11234999999999998 889999999999999999
Q ss_pred CCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeE-EEEEEeCC-Ccc--EEEecccE
Q psy11780 310 ETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGT-FQMFIEGD-MGT--FEITPQKI 372 (383)
Q Consensus 310 n~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~-i~y~l~~~-~~~--F~I~~~tG 372 (383)
|+|.|.. |...|+|+.+.|.. +. |+|+|.+.|+. +.|++.++ ... |.++..+|
T Consensus 437 n~P~~~~--~~~~v~e~~~~~~~---v~-----A~D~D~~~n~~~~~~~l~~~~~~~~~~~~~~~~g 493 (550)
T 3q2v_A 437 NAPIPEP--RNMQFCQRNPQPHI---IT-----ILDPDLPPNTSPFTAELTHGASVNWTIEYNDAAQ 493 (550)
T ss_dssp CCCEESC--SSCEEESSSCCCEE---EE-----EECCSCTTSSSSCCCEEEECCSSSCEEECCSTTS
T ss_pred CCCcCcC--cccceeecCCCcEE---EE-----EECCCCCCCCCCEEEEECCCCCCCeEEEEecCCC
Confidence 9999985 57789999987754 66 99999999984 88988544 333 44444334
No 8
>1l3w_A EP-cadherin, C-cadherin; cell adhesion, calcium binding, extracellular, ECT metal binding protein; HET: NAG NDG; 3.08A {Xenopus laevis} SCOP: b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1 b.1.6.1
Probab=100.00 E-value=1.7e-50 Score=412.05 Aligned_cols=304 Identities=24% Similarity=0.293 Sum_probs=265.0
Q ss_pred eeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEc
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGAD 74 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D 74 (383)
.++.+.||||+++.|.|+|.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| + ++|+.|+++.|+|
T Consensus 179 ~~~~~~LD~E~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n-~~gt~v~~v~A~D 252 (546)
T 1l3w_A 179 SLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFD---PKTYTALVPE--N-EIGFEVQRLSVTD 252 (546)
T ss_dssp EECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBS---CSEEEEEEES--S-SCCCEEEEECBCC
T ss_pred EEeccCCCcccCceEEEEEEEEECCCCCcceEEEEEEEEeecCCCCCccc---cccceEEEEe--C-CCCCEEEEEEEEe
Confidence 34468999999999999999998 468899999887 8999998 8889999999 8 9999999999999
Q ss_pred CCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEee--cceEEEEEcccCCCCCCcEEEEEEEEEeC
Q psy11780 75 PDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTV--NGKGVIKLIGKLDYENKFLYQLKILAVDR 152 (383)
Q Consensus 75 ~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~--t~~G~I~~~~~LD~E~~~~~~l~V~a~D~ 152 (383)
+|.+. +.|++++|+|.. +..+.|.|+.+ +.+|.|++.++||||....|.|+|+|+|.
T Consensus 253 ~D~~~------------------g~n~~v~y~i~~---~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~a~D~ 311 (546)
T 1l3w_A 253 LDMPG------------------TPAWQAVYKIRV---NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVENA 311 (546)
T ss_dssp CSCTT------------------STTSCEECCBSC---CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEES
T ss_pred CCCCC------------------CCCcEEEEEEEe---CCCceEEEEecCCCCeEEEEECccCCcccccEEEEEEEEEEC
Confidence 99421 346799999953 55789999753 23599999999999999999999999998
Q ss_pred CCC-CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeCC
Q psy11780 153 SNN-DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDPN 231 (383)
Q Consensus 153 ~~~-~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~ 231 (383)
++. .+.++++++|+|+|.|+|| +|.|....|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.++..++|.|++.
T Consensus 312 ~~~~~~~~s~~~~v~I~V~DvND-~P~f~~~~y~~~V~En~~~g~~v~~v~A~D~D~g~n~~i~ysi~~~~~~~F~Id~~ 390 (546)
T 1l3w_A 312 EPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNKD 390 (546)
T ss_dssp SCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEETT
T ss_pred CCCCCCCcceeEEEEEEEEcCCC-CCcEecceEEEEEeCCCCCCCEEEEEEEECCCCCCCceEEEEECCCCCCcEEEeCC
Confidence 742 1246789999999999999 99999999999999999999999999999999999999999999877899999999
Q ss_pred CceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCC
Q psy11780 232 TGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDET 311 (383)
Q Consensus 232 tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~ 311 (383)
+|.|++.++||||....+...|.|.|.|+|.|. |+++++++|+|+|.|+|||+
T Consensus 391 tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~g~---------------------------p~~s~~~~v~I~V~DvNDn~ 443 (546)
T 1l3w_A 391 NGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV---------------------------SVGTGTGTLILHVLDVNDNG 443 (546)
T ss_dssp TTEEEECSCCCTTSSSCCSSCCEEEEEEEECSS---------------------------SCCCCCEEEECCBCCCCCSC
T ss_pred cEEEEECCccCCccccCCCCEEEEEEEEEECCC---------------------------CCcEeEEEEEEEEEECCCCc
Confidence 999999999999986211224999999999998 78899999999999999999
Q ss_pred CcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeE-EEEEEeCC-CccEEEecccE
Q psy11780 312 PTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGT-FQMFIEGD-MGTFEITPQKI 372 (383)
Q Consensus 312 P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~-i~y~l~~~-~~~F~I~~~tG 372 (383)
|.|.+. .+.|+|+.++|+ + +. |+|+|.|.|+. ++|+|.++ .+.|.| ..+|
T Consensus 444 P~f~~~--~~~v~e~~~~g~-v--v~-----A~D~D~~~n~~~~~y~l~~~~~~~f~i-~~~g 495 (546)
T 1l3w_A 444 PVPSPR--VFTMCDQNPEPQ-V--LT-----ISDADIPPNTYPYKVSLSHGSDLTWKA-ELDS 495 (546)
T ss_dssp CCBSCC--CEEECSSSCCCE-E--EE-----BCCSSCTTTTCCCCCBCCSCSSSSCBC-CBCT
T ss_pred CCccCc--eEEEecCCCCCe-E--EE-----EEeCCCCCCCccEEEEECCCCCCCEEE-eccC
Confidence 999854 688999999997 3 66 99999999997 89999654 568988 4444
No 9
>1q55_A EP-cadherin, C-cadherin; trans interaction, desmosome, junction, adhesion, structural protein; HET: NAG NDG; 30.00A {Mus musculus} SCOP: i.20.1.1 PDB: 1q5a_A* 1q5b_A* 1q5c_A*
Probab=100.00 E-value=7.6e-49 Score=418.25 Aligned_cols=301 Identities=24% Similarity=0.304 Sum_probs=264.2
Q ss_pred eeeccccccceeeeeEEEEeeeee-------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEE
Q psy11780 2 INLLNAGVNRVKEKHVLLIGTYLL-------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGA 73 (383)
Q Consensus 2 ~~~~~~~lD~E~~~~~~l~~~~~~-------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~ 73 (383)
|.++++.||||+++.|.|+|.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| + ++|+.|+++.|+
T Consensus 327 I~~~~~~LDrE~~~~y~l~V~A~D~g~~~~s~~~~v~I~V~DvNDn~P~F~---~~~y~~~V~E--n-~~gt~V~~v~A~ 400 (880)
T 1q55_A 327 ISLIGTGLDREKFPEYTLTVQATDLEGAGLSVEGKAIIQITDANDNAPIFD---PKTYTALVPE--N-EIGFEVQRLSVT 400 (880)
T ss_dssp EEECSCCCCTTTCCEEEEEEEEEHHHHTSCEEECCEEEEEECCCCCCCCBS---CSEEEEEEES--S-SCCCEEEEECBC
T ss_pred EEEecccCCHHHcceeEEEEEEEECCCCCccceeEEEEEEEeccCCCCCcc---ccceEEEeec--C-CCCcEEEEEEEE
Confidence 334468999999999999999998 568899999887 8999998 8889999999 8 999999999999
Q ss_pred cCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEee--cceEEEEEcccCCCCCCcEEEEEEEEEe
Q psy11780 74 DPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTV--NGKGVIKLIGKLDYENKFLYQLKILAVD 151 (383)
Q Consensus 74 D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~--t~~G~I~~~~~LD~E~~~~~~l~V~a~D 151 (383)
|+|.+. +.|++++|+|.. +..+.|.|+.+ +++|.|++.++||||....|.|+|+|+|
T Consensus 401 D~D~~~------------------g~n~~v~Ysi~~---~~~~~F~I~~d~~~~~G~i~~~~~LD~E~~~~y~l~V~A~D 459 (880)
T 1q55_A 401 DLDMPG------------------TPAWQAVYKIRV---NEGGFFNITTDPESNQGILTTAKGLDFELRKQYVLQITVEN 459 (880)
T ss_dssp CCSCTT------------------STTSCEECCBSC---CTTSCEEEEECTTTCCEEEEESSCCCCSSCCCEEEEECCEE
T ss_pred CCCCCC------------------CCCceEEEEEec---CCCceEEEEecCCCceEEEecccCCCcccCCcEEEEEEEEE
Confidence 999421 447799999953 55789999753 3459999999999999999999999999
Q ss_pred CCCC-CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeC
Q psy11780 152 RSNN-DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDP 230 (383)
Q Consensus 152 ~~~~-~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~ 230 (383)
.+.. .+.++++++|+|+|.|+|| +|.|.+..|.+.|+|+.++|+.|+++.|+|+|.+.|+.++|+|.++..++|.|++
T Consensus 460 ~~~~~~~~~sst~tV~I~V~DvND-~P~f~~~~y~~~V~En~~~Gt~V~~v~A~D~D~g~n~~v~Ysi~~~~~~~F~Id~ 538 (880)
T 1q55_A 460 AEPFSVPLPTSTATVTVTVEDVNE-APFFVPAVSRVDVSEDLSRGEKIISLVAQDPDKQQIQKLSYFIGNDPARWLTVNK 538 (880)
T ss_dssp SSCCSSCCCCCCEEEEEEEECCCC-CCEESSCEECCCBCTTCCSSEEEEECCEECCCTTCCCCEEEEECCCSSCCCEEET
T ss_pred CCCCCCCCcceeEEEEEEEEeCCC-CCEEecCceEEEEeCCCCCCCEEEEEEEEeCCCCCCCcEEEEECCCCCCCEEEeC
Confidence 8742 1246789999999999999 9999999999999999999999999999999999999999999987789999999
Q ss_pred CCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCC
Q psy11780 231 NTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDE 310 (383)
Q Consensus 231 ~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn 310 (383)
.+|.|++.++||||....++..|+|.|.|+|.+. |+++++++|+|+|.|+|||
T Consensus 539 ~tG~I~~~~~LDrE~~~~~~~~y~l~V~A~D~g~---------------------------p~~sst~tv~I~V~DvNDn 591 (880)
T 1q55_A 539 DNGIVTGNGNLDRESEYVKNNTYTVIMLVTDDGV---------------------------SVGTGTGTLILHVLDVNDN 591 (880)
T ss_dssp TTTEEEECSCCCTTSSSCCSSCCEEEEEEEECSS---------------------------SCCCCCEEEECCBCCCCCS
T ss_pred CccEEEECCccCcccccCCCCEEEEEEEEEECCC---------------------------CCcEeEEEEEEEEEeCCCC
Confidence 9999999999999986222234999999999998 7899999999999999999
Q ss_pred CCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeE-EEEEEeCC-CccEEE
Q psy11780 311 TPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGT-FQMFIEGD-MGTFEI 367 (383)
Q Consensus 311 ~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~-i~y~l~~~-~~~F~I 367 (383)
+|+|.+. ...|+|+.+.|+ + +. |+|+|.|.|+. ++|+|.++ .+.|.|
T Consensus 592 ~P~f~~~--~~~v~E~~~~g~-v--v~-----A~D~D~~~n~~~~~ysl~~~~~~~f~i 640 (880)
T 1q55_A 592 GPVPSPR--VFTMCDQNPEPQ-V--LT-----ISDADIPPNTYPYKVSLSHGSDLTWKA 640 (880)
T ss_dssp CCCBSCC--CEEECSSSCCCE-E--EE-----BCCSSCTTTTCCCCCBCCSCSSSSCBC
T ss_pred CCCccCc--ceEEecCCCCCe-E--EE-----EecCCCCCCCceEEEEECCCCCCCeEE
Confidence 9999854 688999999997 3 66 99999999997 89999654 567887
No 10
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=1.2e-47 Score=365.83 Aligned_cols=259 Identities=32% Similarity=0.443 Sum_probs=229.5
Q ss_pred EEEEecCCC--CCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEE
Q psy11780 52 VIRLKEGPD--TPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVI 129 (383)
Q Consensus 52 ~~~v~E~~~--~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I 129 (383)
.+++.| + .+.|+.|+++. +|+|.+ +++++|+|.. +...++|.|++.+ |.|
T Consensus 6 ~~~v~E--~~~~~~~~~v~~va-~D~D~g---------------------~~~i~Y~l~~--~~~~~~F~Id~~t--G~i 57 (322)
T 2a62_A 6 QMFVLE--EFSGPEPILVGRLH-TDLDPG---------------------SKKIKYILSG--DGAGTIFQINDIT--GDI 57 (322)
T ss_dssp CEECCC--SCCCSSCEECCCCC-CCCCCS---------------------SCCCEEEEEE--TTBTTTEEEETTT--TEE
T ss_pred eeeecc--ccCCCCCEEEEEEE-EcCCCC---------------------CCEEEEEEEC--CCCCCcEEEeCCc--CEE
Confidence 467788 7 88999999996 899973 3588999953 3345799999988 999
Q ss_pred EEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCC-
Q psy11780 130 KLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDR- 208 (383)
Q Consensus 130 ~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~- 208 (383)
++.++||||+...|.|+|+|+|.+++. .+++++.++|.|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|.
T Consensus 58 ~~~~~LDrE~~~~y~l~v~a~D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~ 136 (322)
T 2a62_A 58 HAIKRLDREEKAEYTLTAQAVDFETNK-PLEPPSEFIIKVQDINDNAPEFLNGPYHATVPEMSILGTSVTNVTATDADDP 136 (322)
T ss_dssp EECSCCCTTTCSBCCEEEEEECTTTCS-EEEEEEEECEECCCCSCSCBCCSSSEEEEEECSSCCTTCBCCCCCCCBCSCS
T ss_pred EEeccCCcccccEEEEEEEEEECCCCC-cccceEEEEEEEEecCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 999999999999999999999987532 357789999999999999999999999999999999999999999999996
Q ss_pred --CCCceEEEEEecCCcccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecc
Q psy11780 209 --GINNKILYSISSGSQGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTE 285 (383)
Q Consensus 209 --~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (383)
|.|+.++|+|.++ ..+|.|++.+|.|++. ++||||.... |.|.|.|+|++.
T Consensus 137 ~~G~n~~i~Y~i~~~-~~~F~Id~~tG~i~~~~~~LD~E~~~~----y~l~V~a~D~g~--------------------- 190 (322)
T 2a62_A 137 VYGNSAKLVYSILEG-QPYFSIEPETAIIKTALPNMDREAKEE----YLVVIQAKDMGG--------------------- 190 (322)
T ss_dssp SSTTSSCEEEEEEEC-TTTEEECTTTCCEEECSSCCCGGGCSE----EEEEEEEEESCS---------------------
T ss_pred CCCccEEEEEEEccC-CCCEEEecCCCEEEecccCCCcccCCe----EEEEEEEEECCC---------------------
Confidence 7889999999865 5799999999999998 8999999877 999999999997
Q ss_pred cccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeC--CCc
Q psy11780 286 ESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEG--DMG 363 (383)
Q Consensus 286 ~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~--~~~ 363 (383)
..+.+++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++. |+|+|.|.|+.++|+|.+ ..+
T Consensus 191 ----p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~-----A~D~D~g~n~~i~Y~i~~g~~~~ 261 (322)
T 2a62_A 191 ----HSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVK-----ANDQDIGENAQSSYDIIDGDGTA 261 (322)
T ss_dssp ----SSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEE-----CCCSSCGGGTCCEEEEC---CCS
T ss_pred ----CCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEE-----EEeCCCCCCceEEEEEECCCCCC
Confidence 112478999999999999999999999999999999999999999998 999999999999999943 367
Q ss_pred cEEEe----cccEEE
Q psy11780 364 TFEIT----PQKIIN 374 (383)
Q Consensus 364 ~F~I~----~~tG~~ 374 (383)
+|.|+ +.+|.-
T Consensus 262 ~F~I~~d~~~~tG~i 276 (322)
T 2a62_A 262 LFEITSDAQAQDGVI 276 (322)
T ss_dssp SBCCBCCTTTSEEEE
T ss_pred cEEEeccCCCceEEE
Confidence 99999 356754
No 11
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=4.8e-44 Score=340.82 Aligned_cols=245 Identities=22% Similarity=0.332 Sum_probs=206.5
Q ss_pred eecccccccee-----eeeEEEEeeeee--------eeeEEEEEeecC-CCCCeEEeCCCee--EEEEEecCCCCCCCeE
Q psy11780 3 NLLNAGVNRVK-----EKHVLLIGTYLL--------LSAILVDSSVSG-NRAPRFIIDEQTE--IVIRLKEGPDTPAGTF 66 (383)
Q Consensus 3 ~~~~~~lD~E~-----~~~~~l~~~~~~--------~~~~~~i~v~~~-Dn~P~F~~~~~~~--~~~~v~E~~~~~~g~~ 66 (383)
+.+++.||||+ +..|.|+++|.+ +.+.++|.|.|. ||+|+|. +.. |.+.|+| ++++|+.
T Consensus 52 l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~~~s~~~~v~I~V~DvNDn~P~F~---~~~~~y~~~v~E--n~~~gt~ 126 (316)
T 3ubf_A 52 VRVKKKWDYEELGPEKTIDFWVIITNMGHNAGIKYTDNQRVIILVKDVNDEPPYFI---NRPLPMQAVVQL--NAPPNTP 126 (316)
T ss_dssp EEESSCCCGGGSCTTCEEEEEEEEEC-------CCCEEEEEEEEEECTTCCCCEEC---CSSSSEEEEECT--TCCTTCE
T ss_pred EEECCccChhhcccccceEEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccC---CCCCCEEEEEeC--CCCCCCE
Confidence 56789999998 578999998876 348888888887 8999998 555 8999999 9999999
Q ss_pred EEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEEEEcccCCCCCCcEEEEE
Q psy11780 67 IYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVIKLIGKLDYENKFLYQLK 146 (383)
Q Consensus 67 i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~ 146 (383)
|+++.|+|+|.+. .++|+|. .++..++|.|++.+ |.|+++++||||....|.|.
T Consensus 127 v~~v~A~D~D~g~----------------------ni~Y~i~--~~~~~~~F~Id~~t--G~i~~~~~lD~e~~~~y~l~ 180 (316)
T 3ubf_A 127 VFTLQARDPDTDH----------------------NIHYFIV--RDRTGGRFEVDERS--GVVRTRGTDLFQLDMEYVLY 180 (316)
T ss_dssp EEECCEECSSTTC----------------------CEEEEEE--EEESSSCEEECTTT--CEEEECSSCCCCTTCEEEEE
T ss_pred EEEEEEECCCCCC----------------------ceEEEEE--eCCCCCEEEEECCc--cEEEECCcCCcccCcEEEEE
Confidence 9999999999854 3899995 34557899999888 99999999999999999999
Q ss_pred EEEEeCCCC--CCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEe--cCC
Q psy11780 147 ILAVDRSNN--DRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSIS--SGS 222 (383)
Q Consensus 147 V~a~D~~~~--~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~--~~~ 222 (383)
|+|+|.+++ .+.+++++.++|.|.| |||+|.|.+..|.+.|+|+.++|+.|+++.|+|+| ++.++|+|. +..
T Consensus 181 V~A~D~g~~~~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D---n~~i~Y~i~~~~~~ 256 (316)
T 3ubf_A 181 VKAEDQNGKVDDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDIISIKAKSFA---DREIRYTLKAQGQG 256 (316)
T ss_dssp EEEEESCC-------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEEEECCEECTT---CCCEEEEEEEESSC
T ss_pred EEEEeCCCCCCCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEEEEEEEEeCC---CCEEEEEEEcCCCC
Confidence 999999863 2246778899999999 99999999999999999999999999999999998 688999996 344
Q ss_pred cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEE
Q psy11780 223 QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTI 302 (383)
Q Consensus 223 ~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I 302 (383)
.++|.|++.+|.|++.++||||... ....|.|.|.|+|.++ ++++++.|+|
T Consensus 257 ~~~F~Id~~tG~i~~~~~LD~E~~~-~~~~y~l~V~A~dd~g----------------------------~~~~~~~v~I 307 (316)
T 3ubf_A 257 AGTFNIGPTSGIVKLAKELDFEDLR-QPHVYSLIVTATEDSG----------------------------GFSTSVDLTI 307 (316)
T ss_dssp TTTEEECTTTCEEEECSCCCSSCTT-SCSEEEEEEEEEESSS----------------------------SCEEEEEEEE
T ss_pred CCeEEEECCeEEEEECCcCCccccC-CCceEEEEEEEEECCC----------------------------CCEEEEEEEE
Confidence 7899999999999999999999872 0124999999995433 2789999999
Q ss_pred EEeecCCCC
Q psy11780 303 IITDVNDET 311 (383)
Q Consensus 303 ~V~DvNDn~ 311 (383)
+|.|+||||
T Consensus 308 ~V~DvNDn~ 316 (316)
T 3ubf_A 308 RVTDVNDNA 316 (316)
T ss_dssp EEECC----
T ss_pred EEEecCCCC
Confidence 999999996
No 12
>2a62_A Cadherin-8; extracellular domain, homodimer, calcium binding, adhesion; 4.50A {Mus musculus}
Probab=100.00 E-value=3.1e-44 Score=342.35 Aligned_cols=251 Identities=26% Similarity=0.331 Sum_probs=215.7
Q ss_pred eeccccccceeeeeEEEEeeeee--------eeeEEEEEeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEE
Q psy11780 3 NLLNAGVNRVKEKHVLLIGTYLL--------LSAILVDSSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGA 73 (383)
Q Consensus 3 ~~~~~~lD~E~~~~~~l~~~~~~--------~~~~~~i~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~ 73 (383)
+.+++.||||+++.|.|+|.|.| +.+.++|.|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+
T Consensus 57 i~~~~~LDrE~~~~y~l~v~a~D~~~~~~~~~~~~v~I~V~DvNDn~P~F~---~~~y~~~v~E--~~~~gt~v~~v~A~ 131 (322)
T 2a62_A 57 IHAIKRLDREEKAEYTLTAQAVDFETNKPLEPPSEFIIKVQDINDNAPEFL---NGPYHATVPE--MSILGTSVTNVTAT 131 (322)
T ss_dssp EEECSCCCTTTCSBCCEEEEEECTTTCSEEEEEEEECEECCCCSCSCBCCS---SSEEEEEECS--SCCTTCBCCCCCCC
T ss_pred EEEeccCCcccccEEEEEEEEEECCCCCcccceEEEEEEEEecCCCCCccC---CCceEEEEeC--CCCCCCEEEEEEEE
Confidence 56789999999999999999987 246788888777 9999998 8899999999 99999999999999
Q ss_pred cCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEEEEc-ccCCCCCCcEEEEEEEEEeC
Q psy11780 74 DPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVIKLI-GKLDYENKFLYQLKILAVDR 152 (383)
Q Consensus 74 D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I~~~-~~LD~E~~~~~~l~V~a~D~ 152 (383)
|+|.+. .|.|++++|+|.. + .+.|.|++.+ |.|+++ ++||||....|.|.|+|+|.
T Consensus 132 D~D~~~-----------------~G~n~~i~Y~i~~--~--~~~F~Id~~t--G~i~~~~~~LD~E~~~~y~l~V~a~D~ 188 (322)
T 2a62_A 132 DADDPV-----------------YGNSAKLVYSILE--G--QPYFSIEPET--AIIKTALPNMDREAKEEYLVVIQAKDM 188 (322)
T ss_dssp BCSCSS-----------------STTSSCEEEEEEE--C--TTTEEECTTT--CCEEECSSCCCGGGCSEEEEEEEEEES
T ss_pred eCCCCC-----------------CCccEEEEEEEcc--C--CCCEEEecCC--CEEEecccCCCcccCCeEEEEEEEEEC
Confidence 999621 1346789999953 3 4699999988 999998 99999999999999999999
Q ss_pred CCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEe--
Q psy11780 153 SNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS-QGIFDID-- 229 (383)
Q Consensus 153 ~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id-- 229 (383)
|+|...+++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|++|.|+|+|.|.|+.++|+|..+. .++|.|+
T Consensus 189 g~p~~~~s~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n~~i~Y~i~~g~~~~~F~I~~d 268 (322)
T 2a62_A 189 GGHSGGLSGTTTLTVTLTDVNDNPPKFAQSLYHFSVPEDVVLGTAIGRVKANDQDIGENAQSSYDIIDGDGTALFEITSD 268 (322)
T ss_dssp CSSSSCCBCCEEEEEEECCCCCCCCCCSCSEEEEEECSCCSSCCEEEEEECCCSSCGGGTCCEEEEC---CCSSBCCBCC
T ss_pred CCCCCCceeEEEEEEEEEecCCCCCeecCCCceeEeECCCCCCcEEEEEEEEeCCCCCCceEEEEEECCCCCCcEEEecc
Confidence 9864457889999999999999999999999999999999999999999999999999999999997654 6899998
Q ss_pred --CCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEe
Q psy11780 230 --PNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIIT 305 (383)
Q Consensus 230 --~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~ 305 (383)
+.+|.|++.++||||.... |.|+|+|+|.+. |++... ..+++++++|.|+|.
T Consensus 269 ~~~~tG~i~~~~~LD~E~~~~----y~l~V~A~D~g~---pp~~~~-----------------~~~~s~~~~V~I~V~ 322 (322)
T 2a62_A 269 AQAQDGVIRLRKPLDFETKKS----YTLKVEAANIHI---DPRFSS-----------------RGPFKDTATVKIVVE 322 (322)
T ss_dssp TTTSEEEEEBCSCCCCSSCCE----EEEEEEEECCCS---SCTTSS-----------------CCCCCCCCEEEEEEC
T ss_pred CCCceEEEEECCcCCcccCCe----EEEEEEEEECCC---CCcccc-----------------CCCcccEEEEEEEEC
Confidence 4589999999999999876 999999999986 111100 124678888888874
No 13
>3ubf_A Neural-cadherin; cell adhesion; 2.50A {Drosophila melanogaster} PDB: 3ubg_A
Probab=100.00 E-value=1.2e-42 Score=331.10 Aligned_cols=228 Identities=25% Similarity=0.396 Sum_probs=191.1
Q ss_pred EEEEEEeeeCCCCCCcEEEEeecceEEEEEcccCCCCCC-----cEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCC
Q psy11780 102 KVVYHLENVDGDEKDLFSISTVNGKGVIKLIGKLDYENK-----FLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQP 176 (383)
Q Consensus 102 ~v~y~i~~~~~~~~~~F~I~~~t~~G~I~~~~~LD~E~~-----~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~ 176 (383)
.+.|+|. . ..++|.|++ + |.|+++++||||.. ..|.|.|+|.|++.+. .+++++.|+|.|.|+|||+
T Consensus 32 ~~~f~i~--~--~~~~F~i~~-t--G~l~~~~~LD~E~~~~~~~~~~~l~v~a~d~~~~~-~~s~~~~v~I~V~DvNDn~ 103 (316)
T 3ubf_A 32 KETFKIR--D--DNPWVTVET-N--GAVRVKKKWDYEELGPEKTIDFWVIITNMGHNAGI-KYTDNQRVIILVKDVNDEP 103 (316)
T ss_dssp TCEEEES--S--CCSSEEECT-T--SEEEESSCCCGGGSCTTCEEEEEEEEEC--------CCCEEEEEEEEEECTTCCC
T ss_pred cceEEEe--C--CCCeEEECC-C--eEEEECCccChhhcccccceEEEEEEEEcCCCCCC-cccceEEEEEEEEECCCCC
Confidence 3456663 1 236899998 6 99999999999984 5788999999987542 3578999999999999999
Q ss_pred CeEecCc--cEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC-CcccEEEeCCCceEEEcccCCcccccCCCceE
Q psy11780 177 PEFVAVS--SVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSG-SQGIFDIDPNTGNIFTLKELDRESATSNNGAY 253 (383)
Q Consensus 177 P~f~~~~--~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~-~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y 253 (383)
|.|.... |.+.|+|++++|+.|+++.|+|+|.+.| ++|+|..+ ..++|.|++.+|.|++.++||||.... |
T Consensus 104 P~F~~~~~~y~~~v~En~~~gt~v~~v~A~D~D~g~n--i~Y~i~~~~~~~~F~Id~~tG~i~~~~~lD~e~~~~----y 177 (316)
T 3ubf_A 104 PYFINRPLPMQAVVQLNAPPNTPVFTLQARDPDTDHN--IHYFIVRDRTGGRFEVDERSGVVRTRGTDLFQLDME----Y 177 (316)
T ss_dssp CEECCSSSSEEEEECTTCCTTCEEEECCEECSSTTCC--EEEEEEEEESSSCEEECTTTCEEEECSSCCCCTTCE----E
T ss_pred CccCCCCCCEEEEEeCCCCCCCEEEEEEEECCCCCCc--eEEEEEeCCCCCEEEEECCccEEEECCcCCcccCcE----E
Confidence 9999887 8999999999999999999999999866 99999854 478999999999999999999999877 9
Q ss_pred EEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcce
Q psy11780 254 ILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPV 333 (383)
Q Consensus 254 ~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v 333 (383)
.|.|.|+|+++.. ..+.+++++.|+|.|.| |||+|.|.++.|.+.|+|++++|+.|
T Consensus 178 ~l~V~A~D~g~~~-----------------------~~~~~~~~~~v~I~V~d-nDn~P~F~~~~y~~~v~En~~~gt~v 233 (316)
T 3ubf_A 178 VLYVKAEDQNGKV-----------------------DDRRFQSTPEERLSIVG-GKRAPQFYMPSYEAEIPENQKKDSDI 233 (316)
T ss_dssp EEEEEEEESCC------------------------------CBCCCEEEEEEE-SCCCCEESSSSEEEEEETTCCTTCEE
T ss_pred EEEEEEEeCCCCC-----------------------CCccccceEEEEEEEEc-CCCCCEEcCCCceEEEeCCCCCCCEE
Confidence 9999999998510 01457888999999999 99999999999999999999999999
Q ss_pred EEeecccceEEeCCCCCCeEEEEEEe--C-CCccEEEecccEEEE
Q psy11780 334 TFLGGVVPQVFDYDQGKNGTFQMFIE--G-DMGTFEITPQKIINE 375 (383)
Q Consensus 334 ~~v~~~~~~a~D~D~g~n~~i~y~l~--~-~~~~F~I~~~tG~~~ 375 (383)
+++. |+|+| |+.++|+|. + ..++|.|++.+|.-.
T Consensus 234 ~~v~-----A~D~D---n~~i~Y~i~~~~~~~~~F~Id~~tG~i~ 270 (316)
T 3ubf_A 234 ISIK-----AKSFA---DREIRYTLKAQGQGAGTFNIGPTSGIVK 270 (316)
T ss_dssp EECC-----EECTT---CCCEEEEEEEESSCTTTEEECTTTCEEE
T ss_pred EEEE-----EEeCC---CCEEEEEEEcCCCCCCeEEEECCeEEEE
Confidence 9998 99998 678999995 3 368999999999753
No 14
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=100.00 E-value=1.3e-42 Score=311.83 Aligned_cols=207 Identities=30% Similarity=0.475 Sum_probs=187.5
Q ss_pred CCCCCeEEeCCCeeEE--EEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCC
Q psy11780 37 GNRAPRFIIDEQTEIV--IRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDE 114 (383)
Q Consensus 37 ~Dn~P~F~~~~~~~~~--~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~ 114 (383)
+||+|+|. +..|. ++|+| ++++|+.|+++.|+|+|.+. ++|+|.. ++.
T Consensus 2 vn~~P~F~---~~~y~~~~~V~E--~~~~Gt~v~~v~A~D~D~~~-----------------------~~y~i~~--~~~ 51 (210)
T 3mvs_A 2 VNRLPFFT---NHFFDTYLLISE--DTPVGSSVTQLLARDMDNDP-----------------------LVFGVSG--EEA 51 (210)
T ss_dssp CCCCCEEC---CGGGTSCEEEET--TCCTTCEEEECCEECTTCCC-----------------------CEEEEES--HHH
T ss_pred CCCCCccC---CCccceEEEEeC--CCCCCCEEEEEEEEeCCCCc-----------------------EEEEEeC--CCC
Confidence 58999998 77775 78999 99999999999999999854 5566632 333
Q ss_pred CCcEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCC
Q psy11780 115 KDLFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPV 194 (383)
Q Consensus 115 ~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~ 194 (383)
.++|.|++.+ |.|+++++||||+...|.|.|.|+|.++ ..++.|+|+|.|+|||+|.|.+..|.+.|+|+.++
T Consensus 52 ~~~F~Id~~t--G~i~~~~~LD~E~~~~y~l~v~a~D~~~-----~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~ 124 (210)
T 3mvs_A 52 SRFFAVEPDT--GVVWLRQPLDRETKSEFTVEFSVSDHQG-----VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPV 124 (210)
T ss_dssp HHHEEECTTT--CEEEESSCCCTTTCCEEEEEEEEECSSC-----EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCT
T ss_pred CCcEEEeCCC--CEEEECCccCCcccceEEEEEEEEeCCC-----CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCC
Confidence 5789999988 9999999999999999999999999865 35789999999999999999999999999999999
Q ss_pred CcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCce
Q psy11780 195 GTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKT 274 (383)
Q Consensus 195 gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~ 274 (383)
|+.|+++.|+|+|.|.|+.++|+|..+ .++|.|++.+|.|++.++||||.... |.|.|.|+|+++
T Consensus 125 gt~v~~v~A~D~D~g~n~~v~Y~i~~~-~~~F~Id~~tG~i~~~~~LD~E~~~~----y~l~V~a~D~g~---------- 189 (210)
T 3mvs_A 125 GTPIFIVNATDPDLGAGGSVLYSFQPP-SPFFAIDSARGIVTVIQELDYEVTQA----YQLTVNATDQDK---------- 189 (210)
T ss_dssp TCEEEECCEECCSSGGGGCEEEEESSC-CSSEEECTTTCEEEECSCCCTTTCSE----EEEEEEEEECCS----------
T ss_pred CCEEEEEEEEeCCCCCCceEEEEEeCC-CCCEEEeCCcEEEEECCcCCCcccce----EEEEEEEEECCC----------
Confidence 999999999999999999999999854 68999999999999999999999877 999999999985
Q ss_pred eEEEEEeeecccccccCCCCceEEEEEEEEeecCCCC
Q psy11780 275 EVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDET 311 (383)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~ 311 (383)
.+++++++.|+|+|.|+||||
T Consensus 190 ----------------~~~~s~~~~v~I~V~DvND~~ 210 (210)
T 3mvs_A 190 ----------------TRPLSTLANLAIIITDMQDMD 210 (210)
T ss_dssp ----------------SSCCEEEEEEEEEEECCCCCC
T ss_pred ----------------CCCCEEEEEEEEEEEccCCCC
Confidence 267899999999999999986
No 15
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.9e-44 Score=328.47 Aligned_cols=220 Identities=20% Similarity=0.169 Sum_probs=186.7
Q ss_pred eEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEcCCCCc-eEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEE
Q psy11780 42 RFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGADPDGDV-LTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSI 120 (383)
Q Consensus 42 ~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~-~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I 120 (383)
+|. +..|.++|+| ++++|+.|+++.|+|+|.+. ++|.|.+. .--.|+|.. + ..++|.|
T Consensus 2 ~F~---~~~Y~~~V~E--~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~-------------~~~~y~i~~--~-~~~~F~I 60 (246)
T 2x2u_A 2 YFS---RDAYWEKLYV--DQAAGTPLLYVHALRDAPEEVPSFRLGQH-------------LYGTYRTRL--H-ENNWIRI 60 (246)
T ss_dssp EES---CSEEEEEEET--TBCTTCEEEECCEECSSTTCCCCCEECSE-------------EECGGGCEE--E-ECCSEEE
T ss_pred Ccc---CCceEEEeeC--CCCCCCEEEEEEEEcCCCCCcceEEEeec-------------cccceeccC--C-CCCEEEE
Confidence 577 8899999999 99999999999999999853 23332210 000155532 1 3679999
Q ss_pred EeecceEEEEEcccCCCCCCcEE------------EEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCe----------
Q psy11780 121 STVNGKGVIKLIGKLDYENKFLY------------QLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPE---------- 178 (383)
Q Consensus 121 ~~~t~~G~I~~~~~LD~E~~~~~------------~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~---------- 178 (383)
++.+ |.|+++++||||....| .|+|.|+|.+.+...+++++.|+|+|.|+|||+|.
T Consensus 61 d~~t--G~i~~~~~LDrE~~~~y~~~~~G~p~~~~~l~V~a~D~g~~~~~~~~~~~v~I~V~DvNDn~P~~~~~~~~~~~ 138 (246)
T 2x2u_A 61 QEDT--GLLYLQRSLDHSSWEKLSVRNRGFPLLTVYLKVFLSPTSLREGECQWPGCARVYFSFFNTSFPACSSLKPRELC 138 (246)
T ss_dssp CTTT--CEEEESSCBCHHHHHHHHHTSTTSCCCEEEEEEECC-------CCCTTTEEEEEEEEESSCCCCGGGCCHHHHH
T ss_pred CCCc--EEEEECCcCChhHhhhhccccCCCcccceEEEEEEEcCCCCCCcccceEEEEEEEEECCCCCCccccccccccc
Confidence 9988 99999999999999999 99999999987643467789999999999999999
Q ss_pred EecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEE
Q psy11780 179 FVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIK 258 (383)
Q Consensus 179 f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~ 258 (383)
|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.++...+|.|++.+|.|++.++||||.... |.|.|.
T Consensus 139 F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~V~ 214 (246)
T 2x2u_A 139 FPETRPSFRIRENRPPGTFHQFRLLPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVSTRWALDREQREK----YELVAV 214 (246)
T ss_dssp SCSSCCCEEEEBTSCCCEEEECSCHHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEEESSCBCTTTCSE----EEEEEE
T ss_pred cCCCcEEEEEECCCCCCcEEEEEEEEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEEeCCccCccccce----EEEEEE
Confidence 9999999999999999999999999999999999999999987688999999999999999999999877 999999
Q ss_pred EEeC-CCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCccc
Q psy11780 259 VTEE-SKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFR 315 (383)
Q Consensus 259 a~D~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~ 315 (383)
|+|. ++ |+++++++|.|+|.|+|||+|.|.
T Consensus 215 A~d~dg~---------------------------p~~ss~~~v~I~V~DvNDn~P~F~ 245 (246)
T 2x2u_A 215 CTVHAGA---------------------------REEVVMVPFPVTVYDEDDSAPEFE 245 (246)
T ss_dssp EEEC------------------------------CCEEEEEEEEEEEECSSCCSCCCC
T ss_pred EEecCCC---------------------------CcceEEEEEEEEEEEeCCCCCccC
Confidence 9994 44 778999999999999999999996
No 16
>3ubh_A Neural-cadherin; cell adhesion; 2.70A {Drosophila melanogaster}
Probab=100.00 E-value=2.4e-40 Score=327.02 Aligned_cols=236 Identities=25% Similarity=0.391 Sum_probs=211.3
Q ss_pred eeeccccccceeeeeEEEEeeeeee-----------eeEEEEEeecCCCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEE
Q psy11780 2 INLLNAGVNRVKEKHVLLIGTYLLL-----------SAILVDSSVSGNRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRL 70 (383)
Q Consensus 2 ~~~~~~~lD~E~~~~~~l~~~~~~~-----------~~~~~i~v~~~Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v 70 (383)
++++++.||||....|.|+|+|.|. .+.++|.|.+|||+|+|. +..|.++|+| ++++|+.|+++
T Consensus 167 ~i~~~~~ld~e~~~~y~l~V~A~D~g~~~~~~~~~~t~~v~I~V~dndn~P~F~---~~~y~~~v~E--n~~~gt~v~~v 241 (419)
T 3ubh_A 167 VVRTRGTDLFQLDMEYVLYVKAEDQNGKVDDRRFQSTPEERLSIVGGKRAPQFY---MPSYEAEIPE--NQKKDSDIISI 241 (419)
T ss_dssp EEEECSSSCCCBTCEEEEEEEEEEEEEEC--CCEEECCCEEEEEEESCCCCEES---SSCEEEEEET--TCCTTCEEEEC
T ss_pred EEEEecccccccccEEEEEEEEEECCCCccCcccccceEEEEEEECCCCCCcee---cCeeEEEecC--CCCCCcEEEEE
Confidence 3567889999999999999999883 356788888899999998 8899999999 99999999999
Q ss_pred EEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEEEEcccCCCCCCc---EEEEEE
Q psy11780 71 RGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVIKLIGKLDYENKF---LYQLKI 147 (383)
Q Consensus 71 ~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~---~~~l~V 147 (383)
.|+|+|.+ +++|+|.. .++..++|.|++.+ |.|++.++||||... .|.|.|
T Consensus 242 ~A~D~dn~-----------------------~i~Ysi~~-~~~~~~~F~I~~~t--G~i~~~~~LD~E~~~~~~~y~l~V 295 (419)
T 3ubh_A 242 KAKSFADR-----------------------EIRYTLKA-QGQGAGTFNIGPTS--GIVKLAKELDFEDLRQPHVYSLIV 295 (419)
T ss_dssp CEECSSCC-----------------------CCEEEEEE-SSSCCSSEEECTTT--CEEEECSCCCTTCTTSCSEEEEEE
T ss_pred EEecCCCC-----------------------ceEEEEec-CCCCCCcEEEECCC--CEEEECcccCccccccccEEEEEE
Confidence 99999863 67888853 45567899999988 999999999999875 799999
Q ss_pred EEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEE-EEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccE
Q psy11780 148 LAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVT-RVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIF 226 (383)
Q Consensus 148 ~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~-~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F 226 (383)
.|+|.++ .+++++.|+|.|.|+|||+|.|....|.. .|+|+.++|+.|+++.|+|+|.|.|+.++|+|.+ ++|
T Consensus 296 ~a~dd~~---~~s~~~~v~I~V~DvNDn~P~f~~~~~~~~~v~E~~~~gt~v~~v~A~D~D~g~n~~v~Y~i~~---~~F 369 (419)
T 3ubh_A 296 TATEDSG---GFSTSVDLTIRVTDVNDNAPKFELPDYQAHNVDEDIPLGTSILRVKAMDSDSGSNAEIEYLVSD---DHF 369 (419)
T ss_dssp EEECTTT---SCEEEEEEEEEEECCCCCCCEESSSEEEEEEEETTCCTTCEEEECCEECSSCGGGGCEEEEESC---TTE
T ss_pred EEEeCCC---CcEEEEEEEEEEEccCCCCCcccCCcceeEEecCCCCCCCEEEEEEEEeCCCCCCCEEEEEEcC---CcE
Confidence 9997554 46889999999999999999999999987 7999999999999999999999999999999964 489
Q ss_pred EEeCCCceEEEcccCCccc-ccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEe
Q psy11780 227 DIDPNTGNIFTLKELDRES-ATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIIT 305 (383)
Q Consensus 227 ~Id~~tG~i~~~~~lD~E~-~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~ 305 (383)
.|++ +|.|++.++||||. ... |.|.|.|+|+|. |+++++++|+|+|.
T Consensus 370 ~Id~-~G~i~~~~~ld~E~~~~~----y~l~V~a~D~G~---------------------------p~~sst~~v~I~v~ 417 (419)
T 3ubh_A 370 AVDS-NGIIVNNKQLDADNNNAY----YEFIVTAKDKGE---------------------------PPKSGVATVRVYTK 417 (419)
T ss_dssp EECT-TCEEEECSCSSSSCTTCE----EEEEEEEEECCS---------------------------SCCEEEEEEEEEEE
T ss_pred EECC-CeEEEECcccCcccCCce----EEEEEEEEECCc---------------------------CCceeEEEEEEEEe
Confidence 9998 89999999999998 344 999999999998 88999999999998
Q ss_pred e
Q psy11780 306 D 306 (383)
Q Consensus 306 D 306 (383)
|
T Consensus 418 n 418 (419)
T 3ubh_A 418 N 418 (419)
T ss_dssp C
T ss_pred c
Confidence 6
No 17
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=100.00 E-value=2e-40 Score=298.28 Aligned_cols=205 Identities=33% Similarity=0.432 Sum_probs=175.5
Q ss_pred eEEEEEecCCC--CCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceE
Q psy11780 50 EIVIRLKEGPD--TPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKG 127 (383)
Q Consensus 50 ~~~~~v~E~~~--~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G 127 (383)
.|.+.|.| + .|.|+.|+++ |+|+|.+ ++.++|+|.. +...+.|.|++.+ |
T Consensus 5 ~~~~~v~E--n~~~p~~~~v~~v-a~D~D~g---------------------n~~i~Y~l~~--~~~~~~F~Id~~t--G 56 (215)
T 2a4e_A 5 WNQFFVIE--EYTGPDPVLVGRL-HSDIDSG---------------------DGNIKYILSG--EGAGTIFVIDDKS--G 56 (215)
T ss_dssp CCEEEEET--TCCSSSCEEEEEC-CCTTCCS---------------------SSCEEEEEEE--TTBTTTEEECTTT--C
T ss_pred EeeEEEec--cCCCCCCEEEEEE-EECCCCC---------------------CCeEEEEEEC--CCCCCeEEEECCc--e
Confidence 45778999 6 4689999998 8999983 3589999953 3335699999988 9
Q ss_pred EEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCC
Q psy11780 128 VIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGD 207 (383)
Q Consensus 128 ~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D 207 (383)
.|++.++||||....|.|.|.|+|.+.+. ++++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|
T Consensus 57 ~i~~~~~LDrE~~~~y~l~v~a~D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~A~D~D 135 (215)
T 2a4e_A 57 NIHATKTLDREERAQYTLMAQAVDRDTNR-PLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVTASDAD 135 (215)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEEETTTCC-EEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECCEECSS
T ss_pred EEEECCccCCccCCEEEEEEEEEECCCCC-cccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEEEEECC
Confidence 99999999999999999999999997532 46788999999999999999999999999999999999999999999999
Q ss_pred C---CCCceEEEEEecCCcccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeee
Q psy11780 208 R---GINNKILYSISSGSQGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDV 283 (383)
Q Consensus 208 ~---~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~ 283 (383)
. |.|+.++|+|.++ ..+|.|++.+|.|+++ ++||||.... |.|.|.|+|++.
T Consensus 136 ~~~~G~n~~i~Y~i~~~-~~~F~Id~~tG~I~~~~~~LD~E~~~~----y~l~V~A~D~g~------------------- 191 (215)
T 2a4e_A 136 DPTYGNSAKLVYSILEG-QPYFSVEAQTGIIRTALPNMDREAKEE----YHVVIQAKDMGG------------------- 191 (215)
T ss_dssp CTTTCSSSCCEEEEEES-TTTEEECTTTCEEEECSSCCCSSSCSE----EEEEEEEETTTT-------------------
T ss_pred CCCCCCceEEEEEEeCC-CCcEEEeCCccEEEEcccCCCcccCCE----EEEEEEEEECCC-------------------
Confidence 7 8889999999875 5799999999999999 9999999876 999999999987
Q ss_pred cccccccCCCCceEEEEEEEEeecCCCCCc
Q psy11780 284 TEESKTVQPAPTAKTEVTIIITDVNDETPT 313 (383)
Q Consensus 284 ~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~ 313 (383)
..++++++++|+|+|.|+|||+|+
T Consensus 192 ------~~~~~s~~~~v~I~V~DvNDn~P~ 215 (215)
T 2a4e_A 192 ------HMGGLSGTTKVTITLTDDYKDDDK 215 (215)
T ss_dssp ------CTTCCEEEEEEEEEEEC-------
T ss_pred ------CCCCceeEEEEEEEEEECCCCCCC
Confidence 112589999999999999999995
No 18
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=100.00 E-value=8.2e-37 Score=274.73 Aligned_cols=196 Identities=27% Similarity=0.370 Sum_probs=175.9
Q ss_pred EEEEEecCCCCC--CCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeC--CCCCCcEEEEeecce
Q psy11780 51 IVIRLKEGPDTP--AGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVD--GDEKDLFSISTVNGK 126 (383)
Q Consensus 51 ~~~~v~E~~~~~--~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~--~~~~~~F~I~~~t~~ 126 (383)
..++|+| +.+ .|+.|+++.| |+|. |++++|+|.... +++.++|.|++.+
T Consensus 5 ~~~~V~E--n~~~~~~~~v~~v~a-D~d~----------------------n~~v~Ysi~~~~~~~~~~~~F~Id~~t-- 57 (213)
T 3qrb_A 5 AAISCPE--NEKGEFPKNLVQIKS-NRDK----------------------ETKVFYSITGQGADKPPVGVFIIERET-- 57 (213)
T ss_dssp EEEEEET--TCCSSSSEEEEECCC-GGGG----------------------TSCEEEEEESBTTTBSSTTSEEECTTT--
T ss_pred CCEEEeC--CCCCCCCcEEEEEEE-CCCC----------------------CceEEEEEEcCCCCCCCCCeEEEECCC--
Confidence 3678999 776 7899999999 8776 348999996432 3456799999988
Q ss_pred EEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeC
Q psy11780 127 GVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDG 206 (383)
Q Consensus 127 G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~ 206 (383)
|.|++.++||||....|.|.|.|+|.+++ .+++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+
T Consensus 58 G~i~~~~~LDrE~~~~y~l~v~a~D~~~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~ 135 (213)
T 3qrb_A 58 GWLKVTQPLDREAIAKYILYSHAVSSNGE--AVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVSATDA 135 (213)
T ss_dssp CEEEECSCCCTTTCSEEEEEEEEEETTSC--BCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECCEECC
T ss_pred CEEEECCccCcccCceEEEEEEEEeCCCC--cccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEEEEeC
Confidence 99999999999999999999999999876 4677899999999999999999999999999999999999999999999
Q ss_pred CCC---CCceEEEEEecC-----CcccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEE
Q psy11780 207 DRG---INNKILYSISSG-----SQGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVT 277 (383)
Q Consensus 207 D~~---~n~~i~y~i~~~-----~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~ 277 (383)
|.+ .|+.++|+|.++ ..++|.|++.+|.|++. ++||||.... |.|.|.|+|.|.
T Consensus 136 D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~----y~l~V~A~D~g~------------- 198 (213)
T 3qrb_A 136 DDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVISVLTSGLDRESYPT----YTLVVQAADLQG------------- 198 (213)
T ss_dssp SCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEEECSSCCCTTTCCE----EEEEEEEETGGG-------------
T ss_pred CCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEEEccCCCCCccCce----EEEEEEEEeCCC-------------
Confidence 998 899999999864 25799999999999987 8999999877 999999999998
Q ss_pred EEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 278 IIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 278 ~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
|+++++++|+|+|.|
T Consensus 199 --------------~~~s~t~~v~I~V~D 213 (213)
T 3qrb_A 199 --------------EGLSTTAKAVITVKD 213 (213)
T ss_dssp --------------TSCEEEEEEEEEEEC
T ss_pred --------------CCceEEEEEEEEEEC
Confidence 789999999999987
No 19
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=100.00 E-value=2.9e-37 Score=277.88 Aligned_cols=197 Identities=29% Similarity=0.430 Sum_probs=176.6
Q ss_pred EEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeC--CCCCCcEEEEeecceEEE
Q psy11780 52 VIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVD--GDEKDLFSISTVNGKGVI 129 (383)
Q Consensus 52 ~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~--~~~~~~F~I~~~t~~G~I 129 (383)
.++|+| +++ |+.++++.|.|.|.+ .|++++|+|.... +++.+.|.|++.+ |.|
T Consensus 6 ~~~V~E--n~~-g~~~~~v~~~~~D~~--------------------~n~~v~Ysi~~~~~~~~~~~~F~Id~~t--G~i 60 (215)
T 2qvi_A 6 PINLPE--NSR-GPFPQELVRIRSDRD--------------------KNLSLRYSVTGPGADQPPTGIFIINPIS--GQL 60 (215)
T ss_dssp CEEEES--SCC-CCSSEEEEECCCGGG--------------------GTSCEEEEEESTTSSSTTCSSEEECTTT--CEE
T ss_pred cEEEcC--CCC-CCCCEEEEEEeCCCC--------------------CCceEEEEEECCCCCCCCCCcEEEeCCc--cEE
Confidence 468999 888 888899999888873 3679999996421 2346899999988 999
Q ss_pred EEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCC-
Q psy11780 130 KLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDR- 208 (383)
Q Consensus 130 ~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~- 208 (383)
+++++||||....|.|+|+|+|.+++ .+++++.|+|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.|+|+|.
T Consensus 61 ~~~~~LDrE~~~~y~l~v~a~D~g~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~A~D~D~~ 138 (215)
T 2qvi_A 61 SVTKPLDRELIARFHLRAHAVDINGN--QVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVTAIDADDP 138 (215)
T ss_dssp EECSCCCTTTCSEEEEEEEEEETTTC--CCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECCCBCSSCT
T ss_pred EECcccCcccCCeEEEEEEEEECCCC--ceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 99999999999999999999999886 568899999999999999999999999999999999999999999999998
Q ss_pred -CCCceEEEEEecCC-----cccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEe
Q psy11780 209 -GINNKILYSISSGS-----QGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIIT 281 (383)
Q Consensus 209 -~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~ 281 (383)
+.|+.++|+|.++. .++|.|++.+|.|++. ++||||.... |.|.|.|+|.++
T Consensus 139 ~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~LD~E~~~~----y~l~V~a~D~g~----------------- 197 (215)
T 2qvi_A 139 NALNGMLRYRILSQAPSTPSPNMFTINNETGDIITVAAGLDREKVQQ----YTLIIQATDMEG----------------- 197 (215)
T ss_dssp TSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEEECSCCCCTTTCSE----EEEEEECCTTTT-----------------
T ss_pred CCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEEEecCCCCcccCCe----EEEEEEEEECCC-----------------
Confidence 78999999998763 5799999999999995 7999999876 999999999987
Q ss_pred eecccccccCC---CCceEEEEEEEEee
Q psy11780 282 DVTEESKTVQP---APTAKTEVTIIITD 306 (383)
Q Consensus 282 ~~~~~~~~~~~---~~s~~~~v~I~V~D 306 (383)
+ +++++++|+|+|.|
T Consensus 198 ----------~p~~~ls~t~~v~I~V~D 215 (215)
T 2qvi_A 198 ----------NPTYGLSNTATAVITVTD 215 (215)
T ss_dssp ----------CTTTSCCCEEEEEEEECC
T ss_pred ----------CCCCCcceEEEEEEEEEC
Confidence 4 68999999999987
No 20
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=100.00 E-value=4.1e-37 Score=277.64 Aligned_cols=196 Identities=29% Similarity=0.406 Sum_probs=174.2
Q ss_pred EEEEecCCCCCCC--eEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEee--eCCCCCCcEEEEeecceE
Q psy11780 52 VIRLKEGPDTPAG--TFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLEN--VDGDEKDLFSISTVNGKG 127 (383)
Q Consensus 52 ~~~v~E~~~~~~g--~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~--~~~~~~~~F~I~~~t~~G 127 (383)
.++|+| +.++| +.++++.|+|+|. .++|+|.. .++++.+.|.|++.+ |
T Consensus 7 ~~~V~E--n~~~g~~~~v~~v~a~D~d~------------------------~i~Y~i~~~~~~~~~~~~F~Id~~t--G 58 (218)
T 3k5r_A 7 PILIPE--NQRQPFPRDVGKVVDSDRPE------------------------GSKFRLTGKGVDQDPKGTFRINENT--G 58 (218)
T ss_dssp CEEEET--TCCSSCCEEEEECBCTTCCT------------------------TCEEEEEEBTTTBSSTTSEEECTTT--C
T ss_pred cEEEec--CCCCCCCEEEEEEEecCCCc------------------------eEEEEEEcCCCCCCCCCeEEEeCCc--e
Confidence 578999 99988 8999999999887 45677753 235667899999988 9
Q ss_pred EEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCC
Q psy11780 128 VIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGD 207 (383)
Q Consensus 128 ~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D 207 (383)
.|++.++||||+...|.|+|.|+|.+++ .+++++.|+|+|.|+|||+|.|....|.+.|+|++++|+.|+++.|+|+|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~v~a~D~g~~--~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D 136 (218)
T 3k5r_A 59 SVSVTRTLDRETIATYQLYVETTDASGK--TLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMTAFDAD 136 (218)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECSSSC--EEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECCCSCSS
T ss_pred EEEECCcCCcccCCEEEEEEEEEECCCC--ceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEEEEeCC
Confidence 9999999999999999999999998876 56889999999999999999999999999999999999999999999999
Q ss_pred C--CCCceEEEEEecCCc-----ccEEEeCCCceEEEc---ccCCccc--ccCCCceEEEEEEEEeCCCCCCCCCCCcee
Q psy11780 208 R--GINNKILYSISSGSQ-----GIFDIDPNTGNIFTL---KELDRES--ATSNNGAYILEIKVTEESKTVQPAPTAKTE 275 (383)
Q Consensus 208 ~--~~n~~i~y~i~~~~~-----~~F~Id~~tG~i~~~---~~lD~E~--~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~ 275 (383)
. +.|+.++|+|.++.. ++|.|++.+|.|++. ++||||. ... |.|.|.|+|+++
T Consensus 137 ~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~~~~LD~E~~~~~~----y~l~V~a~D~gg----------- 201 (218)
T 3k5r_A 137 DPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIVTVVSPALLDRETLENPK----YELIIEAQDMAG----------- 201 (218)
T ss_dssp SSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEEECSCGGGCCGGGCSCSE----EEEEEEEEECSS-----------
T ss_pred CCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEEEeccCCCCCccccCCCe----EEEEEEEEECCC-----------
Confidence 9 789999999987542 679999999999987 6999999 546 999999999993
Q ss_pred EEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 276 VTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
..|+++++++|+|+|.|
T Consensus 202 --------------~~p~~sst~~v~I~V~D 218 (218)
T 3k5r_A 202 --------------LDVGLTGTATATIVIDD 218 (218)
T ss_dssp --------------TTTTCEEEEEEEEEEEC
T ss_pred --------------CCCCeeEEEEEEEEEEC
Confidence 12779999999999987
No 21
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=100.00 E-value=9.4e-36 Score=265.69 Aligned_cols=192 Identities=28% Similarity=0.435 Sum_probs=171.8
Q ss_pred EEEEecCCCCCCC--eEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEE
Q psy11780 52 VIRLKEGPDTPAG--TFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVI 129 (383)
Q Consensus 52 ~~~v~E~~~~~~g--~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I 129 (383)
.++|+| +.+.| ..|+++. +|+|.+. . +|+|. .++..++|.|++.+ |.|
T Consensus 6 ~~~V~E--n~~~~~~~~v~~v~-~D~D~g~----------------------~-~Y~i~--~~~~~~~F~Id~~t--G~i 55 (203)
T 3ppe_A 6 RMHIRE--EIDSPLPHHVGKLT-SSVGNKN----------------------A-MYIIE--GESANTIFKVQGYD--GDI 55 (203)
T ss_dssp EEEEET--TCCSSSCEEEEECC-BCCCCTT----------------------E-EEEEE--ETTBTTTEEEETTT--TEE
T ss_pred cEEEEc--cCCCCCCEEEEEEE-ecCCCCC----------------------c-EEEEe--cCCCCCeEEEECCc--CEE
Confidence 578999 88877 8999998 9999864 3 89995 35556799999998 999
Q ss_pred EEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCC--
Q psy11780 130 KLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGD-- 207 (383)
Q Consensus 130 ~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D-- 207 (383)
+++++||||....|.|+|.|+|.+.+. .+++++.|+|.|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|
T Consensus 56 ~~~~~LDrE~~~~y~l~v~a~D~g~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~ 134 (203)
T 3ppe_A 56 YAFERLDREKKAEYELTAHIIDRRNNR-SLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVTAEDADDP 134 (203)
T ss_dssp EESSCCCTTTCCEEEEEEEEEETTTTE-ECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECCEECCSCT
T ss_pred EECccccccccceEEEEEEEEECCCCC-cccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEEEEcCCCc
Confidence 999999999999999999999998752 35778999999999999999999999999999999999999999999999
Q ss_pred -CCCCceEEEEEecCCcccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecc
Q psy11780 208 -RGINNKILYSISSGSQGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTE 285 (383)
Q Consensus 208 -~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (383)
.|.|+.++|+|.++ ..+|.|+ .+|.|++. ++||||.... |.|.|.|+|.++
T Consensus 135 ~~g~n~~i~Y~i~~~-~~~F~I~-~tG~i~~~~~~LD~E~~~~----y~l~V~A~D~~G--------------------- 187 (203)
T 3ppe_A 135 TVAGHATVTYQIIKG-NEYFTVD-DSGVIFTARADLDRESQSA----YEIIVKAKDALG--------------------- 187 (203)
T ss_dssp TSSSTTCEEEEEEES-TTTEEEC-TTSEEEESCSCCCTTTCSE----EEEEEEEEETTC---------------------
T ss_pred CCCCceEEEEEEeCC-CCcEEEe-CCeEEEECCcCCCcccCCE----EEEEEEEEeCCC---------------------
Confidence 47899999999975 4699999 99999999 9999999877 999999999844
Q ss_pred cccccCCCCceEEEEEEEEee
Q psy11780 286 ESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 286 ~~~~~~~~~s~~~~v~I~V~D 306 (383)
.|+++++++|+|+|.|
T Consensus 188 -----~p~~s~t~~v~I~V~D 203 (203)
T 3ppe_A 188 -----LTGESSTATVIIRLTD 203 (203)
T ss_dssp -----CCCSSSEEEEEEEEEC
T ss_pred -----CCCCeEEEEEEEEEEC
Confidence 1668999999999987
No 22
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=100.00 E-value=1.7e-36 Score=271.50 Aligned_cols=196 Identities=31% Similarity=0.418 Sum_probs=165.5
Q ss_pred EEEEecCCCCC--CCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEEE
Q psy11780 52 VIRLKEGPDTP--AGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGVI 129 (383)
Q Consensus 52 ~~~v~E~~~~~--~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~I 129 (383)
.++|.| +.+ .++.++++ |+|+|.+ +++++|+|. .++..++|.|++.+ |.|
T Consensus 6 ~~~v~E--n~~~~~~~~v~~~-a~D~D~g---------------------~~~i~Y~l~--~~~~~~~F~Id~~t--G~i 57 (207)
T 3lnd_A 6 QFFLLE--EYTGSDYQYVGKL-HSDQDRG---------------------DGSLKYILS--GDGAGDLFIINENT--GDI 57 (207)
T ss_dssp CEEEES--CBCSSSCEEEEEC-CCTTCCS---------------------STTBCCCCC--SSSBTTTEEECTTT--CEE
T ss_pred ccEEEe--ecCCCCCEEEEEE-EeCCCCC---------------------CceEEEEEE--CCCCCCeEEEECCc--eEE
Confidence 357889 766 44688888 8999973 347889984 33445699999988 999
Q ss_pred EEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCC-
Q psy11780 130 KLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDR- 208 (383)
Q Consensus 130 ~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~- 208 (383)
++.++||||....|.|.|.|+|.+.+. .+++++.|+|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.
T Consensus 58 ~~~~~LDrE~~~~y~l~v~a~D~~~~~-~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~A~D~D~~ 136 (207)
T 3lnd_A 58 QATKRLDREEKPVYILRAQAVNRRTGR-PVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVTATDADDP 136 (207)
T ss_dssp EECSCCCGGGCCEEEC----CBSSSCC-CCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECCEECSSCT
T ss_pred EECCCcCcccCCEEEEEEEEEECCCCC-ccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEEEEeCCCC
Confidence 999999999999999999999987422 467788999999999999999999999999999999999999999999998
Q ss_pred --CCCceEEEEEecCCcccEEEeCCCceEEEc-ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecc
Q psy11780 209 --GINNKILYSISSGSQGIFDIDPNTGNIFTL-KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTE 285 (383)
Q Consensus 209 --~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~-~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~ 285 (383)
|.|+.++|+|.++ ..+|.|++.+|.|++. ++||||.... |.|.|.|+|++.
T Consensus 137 ~~g~n~~i~Y~i~~~-~~~F~Id~~tG~i~~~~~~lD~E~~~~----y~l~V~A~D~g~--------------------- 190 (207)
T 3lnd_A 137 TYGNSAKVVYSILQG-QPYFSVESETGIIKTALLNMDRENREQ----YQVVIQAKDMGG--------------------- 190 (207)
T ss_dssp TSSSTTCCEEEEEES-GGGEEECTTTCEEEECCSSCCC--CCE----EEEEEEEESGGG---------------------
T ss_pred CCCCCcEEEEEEcCC-CCCEEEcCCCcEEEECcccCCcccCCE----EEEEEEEEECCC---------------------
Confidence 8899999999865 5699999999999999 9999999877 999999999987
Q ss_pred cccccCCCCceEEEEEEEEee
Q psy11780 286 ESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 286 ~~~~~~~~~s~~~~v~I~V~D 306 (383)
..++++++++|+|+|.|
T Consensus 191 ----~~~~~s~t~~v~I~V~D 207 (207)
T 3lnd_A 191 ----QMGGLSGTTTVNITLTD 207 (207)
T ss_dssp ----CTTCBEEEEEEEEEEEC
T ss_pred ----CCCCcEeEEEEEEEEeC
Confidence 11268999999999987
No 23
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.98 E-value=7.6e-32 Score=246.19 Aligned_cols=204 Identities=22% Similarity=0.281 Sum_probs=163.4
Q ss_pred eeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEE
Q psy11780 49 TEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGV 128 (383)
Q Consensus 49 ~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~ 128 (383)
+.|.++|+| ++++|+.++.+.+.|.+.. +.++.+.|+|.. ....+|.|++.+ |.
T Consensus 20 P~~~vsV~E--~sp~GTvv~~~~~~~~~d~-------------------~~n~~i~ysl~~---~~~~~f~id~~t--g~ 73 (242)
T 4apx_B 20 PATIVAIDE--ESRNGTILVDNMLIKGTAG-------------------GPDPTIELSLKD---NVDYWVLLDPVK--QM 73 (242)
T ss_dssp SSEEEEEET--TCCTTCEEESCCCBSSCBS-------------------SSSCSEEEEEES---CGGGCEEEETTT--TE
T ss_pred CeEEEEeeC--CCCCCCEEEEEEEecCCCC-------------------CCCCEEEEEEec---CCCceEEECCCC--CE
Confidence 346788999 9999999987666654432 346689999953 345789999988 77
Q ss_pred EEEc---ccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEE-----
Q psy11780 129 IKLI---GKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQ----- 200 (383)
Q Consensus 129 I~~~---~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~----- 200 (383)
+.+. +.||||....|.+.+.+.+.+.+.......+.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.|++
T Consensus 74 ~~l~~t~~~LDrE~~~~~~~~~~~v~~~~~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~~~ 153 (242)
T 4apx_B 74 LFLNSTGRVLDRDPPMNIHSIVVQVQCVNKKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFSGD 153 (242)
T ss_dssp EEECCTTSCCCCSTTTCCCEEEEEEEEEETTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTTTT
T ss_pred EEEEecCCceeccCCCceEEEEEEEEeECCCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeeecc
Confidence 7764 67999998766655555543332224566788999999999999999999999999999999999976
Q ss_pred EEEEeCCCCCCceEEEEEecCC-----cccEEEeC-CCceEEEcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCce
Q psy11780 201 VKAVDGDRGINNKILYSISSGS-----QGIFDIDP-NTGNIFTLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKT 274 (383)
Q Consensus 201 v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~-~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~ 274 (383)
+.|+|+|.|.|+.|+|+|..+. ...|.|++ .+|.|+++++||||.... |.|.|+|+|+|...
T Consensus 154 v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~~~~~LD~E~~~~----y~l~V~A~D~G~~~-------- 221 (242)
T 4apx_B 154 NGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVVLRKRLNYEDKTR----YYVIIQANDRAQNL-------- 221 (242)
T ss_dssp TSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEEECSCCCTTTCCE----EEEEEEEEECCSSG--------
T ss_pred cccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEEECCcCChhhCCE----EEEEEEEEECCcCc--------
Confidence 7899999999999999998754 35799995 599999999999999877 99999999999710
Q ss_pred eEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 275 EVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
...+++.+.|+|+|+-
T Consensus 222 ----------------~~~~~~~~~vtVnVe~ 237 (242)
T 4apx_B 222 ----------------NERRTTTTTLTVDLEH 237 (242)
T ss_dssp ----------------GGCCEEEEEEEEEEEC
T ss_pred ----------------hhcccCCceEEEEEee
Confidence 0136778888888863
No 24
>3mvs_A Cadherin-23, otocadherin; adhesion, extracellular domain, cell adhesion; 1.10A {Mus musculus} PDB: 4apx_A* 2whv_A 2wcp_A* 4aq8_A 4axw_A* 4aqe_A* 4aqa_A* 2wd0_A* 2wbx_A
Probab=99.97 E-value=1.8e-31 Score=239.23 Aligned_cols=160 Identities=29% Similarity=0.480 Sum_probs=148.0
Q ss_pred CCCCeEecCccE--EEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCC
Q psy11780 174 DQPPEFVAVSSV--TRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNN 250 (383)
Q Consensus 174 Dn~P~f~~~~~~--~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~ 250 (383)
|++|.|....|. +.|+|++++|+.|+++.|+|+|. +.++|+|.++. .++|.|++.+|.|++.++||||....
T Consensus 3 n~~P~F~~~~y~~~~~V~E~~~~Gt~v~~v~A~D~D~---~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LD~E~~~~-- 77 (210)
T 3mvs_A 3 NRLPFFTNHFFDTYLLISEDTPVGSSVTQLLARDMDN---DPLVFGVSGEEASRFFAVEPDTGVVWLRQPLDRETKSE-- 77 (210)
T ss_dssp CCCCEECCGGGTSCEEEETTCCTTCEEEECCEECTTC---CCCEEEEESHHHHHHEEECTTTCEEEESSCCCTTTCCE--
T ss_pred CCCCccCCCccceEEEEeCCCCCCCEEEEEEEEeCCC---CcEEEEEeCCCCCCcEEEeCCCCEEEECCccCCcccce--
Confidence 489999999997 79999999999999999999995 56899998654 67899999999999999999999877
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCC
Q psy11780 251 GAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVIN 330 (383)
Q Consensus 251 ~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g 330 (383)
|.|.|.|+|+++ ..++.|.|+|.|+|||+|.|.+..|.+.|+|++++|
T Consensus 78 --y~l~v~a~D~~~------------------------------~~~~~v~I~V~DvNDn~P~f~~~~y~~~v~E~~~~g 125 (210)
T 3mvs_A 78 --FTVEFSVSDHQG------------------------------VITRKVNIQVGDVNDNAPTFHNQPYSVRIPENTPVG 125 (210)
T ss_dssp --EEEEEEEECSSC------------------------------EEEEEEEEEEECCCCCCCEECSCSEEEEEETTCCTT
T ss_pred --EEEEEEEEeCCC------------------------------CEEEEEEEEEEeCCCCCCcCCCceEEEEEECCCCCC
Confidence 999999999876 357899999999999999999999999999999999
Q ss_pred cceEEeecccceEEeCCCCCCeEEEEEEeCCCccEEEecccEEEE
Q psy11780 331 TPVTFLGGVVPQVFDYDQGKNGTFQMFIEGDMGTFEITPQKIINE 375 (383)
Q Consensus 331 ~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~~~~F~I~~~tG~~~ 375 (383)
+.++++. |+|+|.|.|+.++|+|.+..++|.|++.+|.-.
T Consensus 126 t~v~~v~-----A~D~D~g~n~~v~Y~i~~~~~~F~Id~~tG~i~ 165 (210)
T 3mvs_A 126 TPIFIVN-----ATDPDLGAGGSVLYSFQPPSPFFAIDSARGIVT 165 (210)
T ss_dssp CEEEECC-----EECCSSGGGGCEEEEESSCCSSEEECTTTCEEE
T ss_pred CEEEEEE-----EEeCCCCCCceEEEEEeCCCCCEEEeCCcEEEE
Confidence 9999998 999999999999999988888999999999754
No 25
>2a4e_A Cadherin-11; dimer, calcium binding, cell adhesion; 3.20A {Mus musculus}
Probab=99.96 E-value=4.7e-29 Score=224.09 Aligned_cols=155 Identities=28% Similarity=0.361 Sum_probs=140.6
Q ss_pred cEEEEcCCC--CCCcEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEE
Q psy11780 184 SVTRVSEDV--PVGTSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVT 260 (383)
Q Consensus 184 ~~~~v~E~~--~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~ 260 (383)
|.+.|.|+. |.|+.|+++ |+|+|.| ++.++|+|.++. ..+|.|++.+|.|++.++||||.... |.|.|.|+
T Consensus 6 ~~~~v~En~~~p~~~~v~~v-a~D~D~g-n~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v~a~ 79 (215)
T 2a4e_A 6 NQFFVIEEYTGPDPVLVGRL-HSDIDSG-DGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREERAQ----YTLMAQAV 79 (215)
T ss_dssp CEEEEETTCCSSSCEEEEEC-CCTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSE----EEEEEEEE
T ss_pred eeEEEeccCCCCCCEEEEEE-EECCCCC-CCeEEEEEECCCCCCeEEEECCceEEEECCccCCccCCE----EEEEEEEE
Confidence 577899994 578999988 8999998 889999998765 46999999999999999999999987 99999999
Q ss_pred eCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeeccc
Q psy11780 261 EESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVV 340 (383)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~ 340 (383)
|++. .+++++.+.|.|+|.|+|||+|.|.++.|.+.|+|++++|+.|+++.
T Consensus 80 D~~~--------------------------~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~Gt~v~~v~--- 130 (215)
T 2a4e_A 80 DRDT--------------------------NRPLEPPSEFIVKVQDINDNPPEFLHEIYHANVPERSNVGTSVIQVT--- 130 (215)
T ss_dssp ETTT--------------------------CCEEEEEEEEEEEEECCCCCCCEESSSSEEEEEETTCCTTCEEEECC---
T ss_pred ECCC--------------------------CCcccccEEEEEEEeeCCCCCCCccCCceEEEEECCCCCCCEEEEEE---
Confidence 9975 14578889999999999999999999999999999999999999998
Q ss_pred ceEEeCCC---CCCeEEEEEEeCCCccEEEecccEEEE
Q psy11780 341 PQVFDYDQ---GKNGTFQMFIEGDMGTFEITPQKIINE 375 (383)
Q Consensus 341 ~~a~D~D~---g~n~~i~y~l~~~~~~F~I~~~tG~~~ 375 (383)
|+|+|. |.|+.++|+|.++..+|.|++.||...
T Consensus 131 --A~D~D~~~~G~n~~i~Y~i~~~~~~F~Id~~tG~I~ 166 (215)
T 2a4e_A 131 --ASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIR 166 (215)
T ss_dssp --EECSSCTTTCSSSCCEEEEEESTTTEEECTTTCEEE
T ss_pred --EEECCCCCCCCceEEEEEEeCCCCcEEEeCCccEEE
Confidence 999997 889999999987778999999999754
No 26
>2qvi_A Cadherin-2; beta barrel, strand SWAP, domain SWAP, calcium, cell adhesion, cleavage on PAIR of basic residues, glycoprotein, membrane; 3.01A {Mus musculus} SCOP: b.1.6.1 b.1.6.1 PDB: 1ncj_A
Probab=99.96 E-value=4.4e-29 Score=224.37 Aligned_cols=154 Identities=23% Similarity=0.309 Sum_probs=141.4
Q ss_pred EEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC-----cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEE
Q psy11780 185 VTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS-----QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKV 259 (383)
Q Consensus 185 ~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a 259 (383)
.++|+|+++ |+.++++.|.|.|.+.|+.++|+|.++. .++|.|++.+|.|++.++||||.... |.|+|.|
T Consensus 6 ~~~V~En~~-g~~~~~v~~~~~D~~~n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v~a 80 (215)
T 2qvi_A 6 PINLPENSR-GPFPQELVRIRSDRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIAR----FHLRAHA 80 (215)
T ss_dssp CEEEESSCC-CCSSEEEEECCCGGGGTSCEEEEEESTTSSSTTCSSEEECTTTCEEEECSCCCTTTCSE----EEEEEEE
T ss_pred cEEEcCCCC-CCCCEEEEEEeCCCCCCceEEEEEECCCCCCCCCCcEEEeCCccEEEECcccCcccCCe----EEEEEEE
Confidence 568999998 8888999999999988999999999753 57999999999999999999999877 9999999
Q ss_pred EeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeecc
Q psy11780 260 TEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGV 339 (383)
Q Consensus 260 ~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~ 339 (383)
+|.++ +++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.
T Consensus 81 ~D~g~---------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~-- 131 (215)
T 2qvi_A 81 VDING---------------------------NQVENPIDIVINVIDMNDNRPEFLHQVWNGSVPEGSKPGTYVMTVT-- 131 (215)
T ss_dssp EETTT---------------------------CCCEEEEEEEEEEECCCCCCCBCSSSEEEEEECSSCCTTCEEEECC--
T ss_pred EECCC---------------------------CceeeeEEEEEEEeECCCCCCcccCceeEEEEeCCCCCCCEEEEEE--
Confidence 99998 7789999999999999999999999999999999999999999998
Q ss_pred cceEEeCCC--CCCeEEEEEEeCC------CccEEEecccEEEE
Q psy11780 340 VPQVFDYDQ--GKNGTFQMFIEGD------MGTFEITPQKIINE 375 (383)
Q Consensus 340 ~~~a~D~D~--g~n~~i~y~l~~~------~~~F~I~~~tG~~~ 375 (383)
|+|+|. |.|++++|+|.+. .++|.|++.||...
T Consensus 132 ---A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 172 (215)
T 2qvi_A 132 ---AIDADDPNALNGMLRYRILSQAPSTPSPNMFTINNETGDII 172 (215)
T ss_dssp ---CBCSSCTTSTTTCCCCEEEECSSCCSSTTCEEECTTTCEEE
T ss_pred ---EEeCCCCCCCCcEEEEEEecCCCCCCcCCeEEEcCCCcEEE
Confidence 999999 7899999999543 47999999998753
No 27
>2x2u_A Proto-oncogene tyrosine-protein kinase receptor RET; hirschsprung disease, extracellular domain, disease mutation, transferase, glycoprotein; HET: NAG SO4; 2.00A {Homo sapiens}
Probab=99.96 E-value=1.2e-30 Score=239.41 Aligned_cols=162 Identities=17% Similarity=0.099 Sum_probs=142.0
Q ss_pred eEecCccEEEEcCCCCCCcEEEEEEEEeCCCCC--CceEE------EEEecCCcccEEEeCCCceEEEcccCCcccccCC
Q psy11780 178 EFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGI--NNKIL------YSISSGSQGIFDIDPNTGNIFTLKELDRESATSN 249 (383)
Q Consensus 178 ~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~--n~~i~------y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~ 249 (383)
.|.+..|.++|+|++++|+.|++|.|+|+|.+. +..+. |++..+...+|.|++.+|.|++.++||||....
T Consensus 2 ~F~~~~Y~~~V~E~~~~Gt~v~~v~A~D~D~g~~~~~~i~~~~~~~y~i~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~- 80 (246)
T 2x2u_A 2 YFSRDAYWEKLYVDQAAGTPLLYVHALRDAPEEVPSFRLGQHLYGTYRTRLHENNWIRIQEDTGLLYLQRSLDHSSWEK- 80 (246)
T ss_dssp EESCSEEEEEEETTBCTTCEEEECCEECSSTTCCCCCEECSEEECGGGCEEEECCSEEECTTTCEEEESSCBCHHHHHH-
T ss_pred CccCCceEEEeeCCCCCCCEEEEEEEEcCCCCCcceEEEeeccccceeccCCCCCEEEECCCcEEEEECCcCChhHhhh-
Confidence 588999999999999999999999999999853 44554 555544568999999999999999999999877
Q ss_pred CceE------------EEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCC--CCceEEEEEEEEeecCCCCCc--
Q psy11780 250 NGAY------------ILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQP--APTAKTEVTIIITDVNDETPT-- 313 (383)
Q Consensus 250 ~~~y------------~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~s~~~~v~I~V~DvNDn~P~-- 313 (383)
| .|+|.|+|.+. + .+++++.|.|+|.|+|||+|+
T Consensus 81 ---y~~~~~G~p~~~~~l~V~a~D~g~---------------------------~~~~~~~~~~v~I~V~DvNDn~P~~~ 130 (246)
T 2x2u_A 81 ---LSVRNRGFPLLTVYLKVFLSPTSL---------------------------REGECQWPGCARVYFSFFNTSFPACS 130 (246)
T ss_dssp ---HHHTSTTSCCCEEEEEEECC----------------------------------CCCTTTEEEEEEEEESSCCCCGG
T ss_pred ---hccccCCCcccceEEEEEEEcCCC---------------------------CCCcccceEEEEEEEEECCCCCCccc
Confidence 8 99999999987 3 578889999999999999999
Q ss_pred --------ccCCceEEEEeCCCCCCcceEEeecccceEEeCCCCCCeEEEEEEeCC-CccEEEecccEEEE
Q psy11780 314 --------FRSPRYVAEIHENSVINTPVTFLGGVVPQVFDYDQGKNGTFQMFIEGD-MGTFEITPQKIINE 375 (383)
Q Consensus 314 --------f~~~~y~~~V~E~~~~g~~v~~v~~~~~~a~D~D~g~n~~i~y~l~~~-~~~F~I~~~tG~~~ 375 (383)
|.+..|.+.|+|++++|+.|+++. |+|+|.|.|++++|+|.++ .++|.|++.||.-.
T Consensus 131 ~~~~~~~~F~~~~y~~~v~En~~~Gt~v~~v~-----A~D~D~g~n~~i~Y~i~~~~~~~F~Id~~tG~i~ 196 (246)
T 2x2u_A 131 SLKPRELCFPETRPSFRIRENRPPGTFHQFRL-----LPVQFLCPQISVAYRLLEGEGLPFRSAPDSLEVS 196 (246)
T ss_dssp GCCHHHHHSCSSCCCEEEEBTSCCCEEEECSC-----HHHHHHCTTSCEEEEEESCTTSSEECCTTCCEEE
T ss_pred cccccccccCCCcEEEEEECCCCCCcEEEEEE-----EEcCCCCCCcEEEEEEccCCCCCEEEECCcCEEE
Confidence 999999999999999999999998 9999999999999999766 68999999999654
No 28
>3lnd_A CDH6 protein, cadherin 6; cell adhesion, cell membrane, membrane, transmembr; 2.82A {Mus musculus}
Probab=99.95 E-value=8.9e-29 Score=221.24 Aligned_cols=154 Identities=27% Similarity=0.351 Sum_probs=135.0
Q ss_pred EEEEcCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEe
Q psy11780 185 VTRVSEDVPVG--TSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTE 261 (383)
Q Consensus 185 ~~~v~E~~~~g--t~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D 261 (383)
.+.|+|+.+.| +.++++ |+|+|.| ++.++|+|.++. ..+|.|++.+|.|++.++||||.... |.|.|.|+|
T Consensus 6 ~~~v~En~~~~~~~~v~~~-a~D~D~g-~~~i~Y~l~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v~a~D 79 (207)
T 3lnd_A 6 QFFLLEEYTGSDYQYVGKL-HSDQDRG-DGSLKYILSGDGAGDLFIINENTGDIQATKRLDREEKPV----YILRAQAVN 79 (207)
T ss_dssp CEEEESCBCSSSCEEEEEC-CCTTCCS-STTBCCCCCSSSBTTTEEECTTTCEEEECSCCCGGGCCE----EEC----CB
T ss_pred ccEEEeecCCCCCEEEEEE-EeCCCCC-CceEEEEEECCCCCCeEEEECCceEEEECCCcCcccCCE----EEEEEEEEE
Confidence 45799998855 588888 9999998 788999998765 46999999999999999999999887 999999999
Q ss_pred CCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeecccc
Q psy11780 262 ESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVVP 341 (383)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~~ 341 (383)
.+. .+++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.++++.
T Consensus 80 ~~~--------------------------~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~---- 129 (207)
T 3lnd_A 80 RRT--------------------------GRPVEPESEFIIKIHDINDNEPIFTKDVYTATVPEMADVGTFVVQVT---- 129 (207)
T ss_dssp SSS--------------------------CCCCSCCCCCEEEEECCSCCCCEESCSEEEEEEESSCCTTCEEEECC----
T ss_pred CCC--------------------------CCccccEEEEEEEECccCCCCCccCCCceEEEEeCCCCCCCEEEEEE----
Confidence 884 15678889999999999999999999999999999999999999998
Q ss_pred eEEeCCC---CCCeEEEEEEeCCCccEEEecccEEEE
Q psy11780 342 QVFDYDQ---GKNGTFQMFIEGDMGTFEITPQKIINE 375 (383)
Q Consensus 342 ~a~D~D~---g~n~~i~y~l~~~~~~F~I~~~tG~~~ 375 (383)
|+|+|. |.|+.++|+|.++.++|.|++.+|...
T Consensus 130 -A~D~D~~~~g~n~~i~Y~i~~~~~~F~Id~~tG~i~ 165 (207)
T 3lnd_A 130 -ATDADDPTYGNSAKVVYSILQGQPYFSVESETGIIK 165 (207)
T ss_dssp -EECSSCTTSSSTTCCEEEEEESGGGEEECTTTCEEE
T ss_pred -EEeCCCCCCCCCcEEEEEEcCCCCCEEEcCCCcEEE
Confidence 999998 889999999988778999999999754
No 29
>3qrb_A Cadherin-1; cell adhesion; HET: PGE; 1.80A {Mus musculus} PDB: 1ff5_A 3lng_A 2qvf_B 1edh_A 3lne_A 1q1p_A 3lni_A 3q2l_A* 3q2n_A* 3lnh_A 3lnf_A 2o72_A 1suh_A
Probab=99.95 E-value=7.7e-28 Score=216.11 Aligned_cols=152 Identities=25% Similarity=0.382 Sum_probs=137.7
Q ss_pred EEEEcCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC-----cccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 185 VTRVSEDVP--VGTSVLQVKAVDGDRGINNKILYSISSGS-----QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 185 ~~~v~E~~~--~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
.++|+|+.+ .|+.|+++.| |.|. |+.++|+|.+.. .++|.|++.+|.|++.++||||.... |.|.|
T Consensus 6 ~~~V~En~~~~~~~~v~~v~a-D~d~--n~~v~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v 78 (213)
T 3qrb_A 6 AISCPENEKGEFPKNLVQIKS-NRDK--ETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAK----YILYS 78 (213)
T ss_dssp EEEEETTCCSSSSEEEEECCC-GGGG--TSCEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSE----EEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEE-CCCC--CceEEEEEEcCCCCCCCCCeEEEECCCCEEEECCccCcccCce----EEEEE
Confidence 578999998 6788999999 7775 789999998733 35999999999999999999999887 99999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEee
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLG 337 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~ 337 (383)
.|+|.++ +++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.
T Consensus 79 ~a~D~~~---------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~En~~~gt~v~~v~ 131 (213)
T 3qrb_A 79 HAVSSNG---------------------------EAVEDPMEIVITVTDQNDNRPEFTQEVFEGSVAEGAVPGTSVMKVS 131 (213)
T ss_dssp EEEETTS---------------------------CBCSCCEEEEEEEECCSCCCCEESCSEEEEEEETTCCTTCEEEECC
T ss_pred EEEeCCC---------------------------CcccceEEEEEEEEEccCCCCccCCCceEEEEECCCCCCcEEEEEE
Confidence 9999998 6788899999999999999999999999999999999999999998
Q ss_pred cccceEEeCCCC---CCeEEEEEEeC------CCccEEEecccEEEE
Q psy11780 338 GVVPQVFDYDQG---KNGTFQMFIEG------DMGTFEITPQKIINE 375 (383)
Q Consensus 338 ~~~~~a~D~D~g---~n~~i~y~l~~------~~~~F~I~~~tG~~~ 375 (383)
|+|+|.| .|+.++|+|.+ ..++|.|++.+|...
T Consensus 132 -----A~D~D~~~~~~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 173 (213)
T 3qrb_A 132 -----ATDADDDVNTYNAAIAYTIVSQDPELPHKNMFTVNRDTGVIS 173 (213)
T ss_dssp -----EECCSCTTTSSTTCCEEEEEEEESCCSCSCSEEECTTTCEEE
T ss_pred -----EEeCCCCCCCcCcEEEEEEccCCCCCCcCCeEEEECCCcEEE
Confidence 9999999 89999999953 246899999999754
No 30
>3ppe_A Vascular endothelial cadherin; extracellular cadherin (EC) domain, beta barrel, IG-domain L domain swapped dimer interface; 2.10A {Gallus gallus}
Probab=99.95 E-value=1.7e-27 Score=212.26 Aligned_cols=152 Identities=20% Similarity=0.298 Sum_probs=137.1
Q ss_pred cEEEEcCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEE
Q psy11780 184 SVTRVSEDVPVG--TSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVT 260 (383)
Q Consensus 184 ~~~~v~E~~~~g--t~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~ 260 (383)
..++|+||.+.| ..++++. +|+|.+.+ +|+|.++. .++|.|++.+|.|++.++||||.... |.|+|.|+
T Consensus 5 ~~~~V~En~~~~~~~~v~~v~-~D~D~g~~---~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v~a~ 76 (203)
T 3ppe_A 5 NRMHIREEIDSPLPHHVGKLT-SSVGNKNA---MYIIEGESANTIFKVQGYDGDIYAFERLDREKKAE----YELTAHII 76 (203)
T ss_dssp SEEEEETTCCSSSCEEEEECC-BCCCCTTE---EEEEEETTBTTTEEEETTTTEEEESSCCCTTTCCE----EEEEEEEE
T ss_pred ccEEEEccCCCCCCEEEEEEE-ecCCCCCc---EEEEecCCCCCeEEEECCcCEEEECccccccccce----EEEEEEEE
Confidence 457899999888 8889988 99998755 99999765 56999999999999999999999987 99999999
Q ss_pred eCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeeccc
Q psy11780 261 EESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGGVV 340 (383)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~~~ 340 (383)
|.+. ++++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.
T Consensus 77 D~g~--------------------------~~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~--- 127 (203)
T 3ppe_A 77 DRRN--------------------------NRSLEPPSKFIIKVSDINDNAPIFVQKIFNGSVPEMSRLGTSVTKVT--- 127 (203)
T ss_dssp ETTT--------------------------TEECSCCEEEEEEEECCCCCCCEESCSEEEEEEETTCCTTCEEEECC---
T ss_pred ECCC--------------------------CCcccceEEEEEEEcCCCCCCCCccCCccEEEEeccCCCCcEEEEEE---
Confidence 9986 12578889999999999999999999999999999999999999998
Q ss_pred ceEEeCC---CCCCeEEEEEEeCCCccEEEecccEEEE
Q psy11780 341 PQVFDYD---QGKNGTFQMFIEGDMGTFEITPQKIINE 375 (383)
Q Consensus 341 ~~a~D~D---~g~n~~i~y~l~~~~~~F~I~~~tG~~~ 375 (383)
|+|+| .|.|++++|+|.++.++|.|+ .+|...
T Consensus 128 --A~D~D~~~~g~n~~i~Y~i~~~~~~F~I~-~tG~i~ 162 (203)
T 3ppe_A 128 --AEDADDPTVAGHATVTYQIIKGNEYFTVD-DSGVIF 162 (203)
T ss_dssp --EECCSCTTSSSTTCEEEEEEESTTTEEEC-TTSEEE
T ss_pred --EEcCCCcCCCCceEEEEEEeCCCCcEEEe-CCeEEE
Confidence 99999 488999999998777899999 888754
No 31
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.95 E-value=1e-28 Score=201.26 Aligned_cols=115 Identities=26% Similarity=0.453 Sum_probs=108.8
Q ss_pred EEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC---cccEEEeCCCceEEEcccCCc
Q psy11780 167 VKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS---QGIFDIDPNTGNIFTLKELDR 243 (383)
Q Consensus 167 I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~---~~~F~Id~~tG~i~~~~~lD~ 243 (383)
++|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.++. ..+|.|++.+|.|+++++|||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~F~Id~~tG~I~~~~~LD~ 81 (119)
T 2yst_A 2 SSGSSGNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRLDETSGWLSVLHRIDR 81 (119)
T ss_dssp CCCCCSCCCCCCCSSSEEEEEEETTCCTTCEEEECCCCCSSSSCCSCCCCEECSCCTTHHHHEEECTTTCEEEECSCCCT
T ss_pred CeEecCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCCeEEEEEecCCCccccEEEEeCCceEEEECccCCc
Confidence 46899999999999999999999999999999999999999999999999998764 478999999999999999999
Q ss_pred ccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCC
Q psy11780 244 ESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETP 312 (383)
Q Consensus 244 E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P 312 (383)
|.... |.|.|.|+|+|. |++++++.|+|+|.|+|||+|
T Consensus 82 E~~~~----y~l~V~A~D~g~---------------------------p~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 82 EEVNQ----LRFTVMARDRGQ---------------------------PPKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTCSE----EEEEEEECCSBT---------------------------TBCCEEEEEEEEEECSTTCCC
T ss_pred ccCCE----EEEEEEEEECCC---------------------------CCcEEEEEEEEEEEeccCCCC
Confidence 99876 999999999998 778999999999999999998
No 32
>3k5r_A Cadherin 13; mouse, structural protein; 2.00A {Mus musculus} PDB: 3k5s_A
Probab=99.95 E-value=5e-28 Score=218.15 Aligned_cols=151 Identities=26% Similarity=0.369 Sum_probs=136.2
Q ss_pred EEEEcCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecCC-----cccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 185 VTRVSEDVPVG--TSVLQVKAVDGDRGINNKILYSISSGS-----QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 185 ~~~v~E~~~~g--t~v~~v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
.++|+|+.+.| +.++++.|.|+|. .++|+|.+.. .++|.|++.+|.|++.++||||.... |.|.|
T Consensus 7 ~~~V~En~~~g~~~~v~~v~a~D~d~----~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v 78 (218)
T 3k5r_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIAT----YQLYV 78 (218)
T ss_dssp CEEEETTCCSSCCEEEEECBCTTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSE----EEEEE
T ss_pred cEEEecCCCCCCCEEEEEEEecCCCc----eEEEEEEcCCCCCCCCCeEEEeCCceEEEECCcCCcccCCE----EEEEE
Confidence 57899999988 8899999988875 7999997532 58999999999999999999999887 99999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEee
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLG 337 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~ 337 (383)
.|+|.++ +++++++.|.|+|.|+|||+|.|.+..|.+.|+|++++|+.|+++.
T Consensus 79 ~a~D~g~---------------------------~~~~~~~~v~I~V~DvNDn~P~F~~~~y~~~v~E~~~~gt~v~~v~ 131 (218)
T 3k5r_A 79 ETTDASG---------------------------KTLEGPVPLEVIVIDQNDNRPIFREGPYIGHVMEGSPTGTTVMRMT 131 (218)
T ss_dssp EEECSSS---------------------------CEEEEEEEEEEEEECTTCCCCCCCSCSEEEEEETTCCTTCEEEECC
T ss_pred EEEECCC---------------------------CceeeeEEEEEEEEeCCCCCCcccCCceEEEEECCCCCCCEEEEEE
Confidence 9999887 7788999999999999999999999999999999999999999998
Q ss_pred cccceEEeCCC--CCCeEEEEEEeCC------CccEEEecccEEEE
Q psy11780 338 GVVPQVFDYDQ--GKNGTFQMFIEGD------MGTFEITPQKIINE 375 (383)
Q Consensus 338 ~~~~~a~D~D~--g~n~~i~y~l~~~------~~~F~I~~~tG~~~ 375 (383)
|+|+|. |.|+.++|+|.+. .++|.|++.||...
T Consensus 132 -----A~D~D~~~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~ 172 (218)
T 3k5r_A 132 -----AFDADDPATDNALLRYNIRQQTPDKPSPNMFYIDPEKGDIV 172 (218)
T ss_dssp -----CSCSSSSCGGGGCEEEEEEEEESCCSCSCSEEECTTTCEEE
T ss_pred -----EEeCCCCCCCCcEEEEEEecCCCCCCcCCEEEEECCccEEE
Confidence 999999 7899999999543 16899999999743
No 33
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=7.4e-26 Score=182.80 Aligned_cols=109 Identities=32% Similarity=0.468 Sum_probs=101.2
Q ss_pred EEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC----CcccEEEeCCCceEEEcccCC
Q psy11780 167 VKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSG----SQGIFDIDPNTGNIFTLKELD 242 (383)
Q Consensus 167 I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~----~~~~F~Id~~tG~i~~~~~lD 242 (383)
|+|.|+|||+|.|.+..|.+.|+|+.++|+.|+++.|+|+|.|.|+.++|+|.+. ...+|.|++.+|.|+++++||
T Consensus 2 ~~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~v~A~D~D~g~n~~i~Y~i~~~~~~~~~~~F~Id~~tG~I~~~~~LD 81 (114)
T 2ee0_A 2 SSGSSGNDNRPVFKEGQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATKRLFALNNTTGLITVQRSLD 81 (114)
T ss_dssp CCCCCCCCCCCCCSCSEEEEEEETTCCTTCEEEECCCCSCSSCCCSCCEEEECSSCCHHHHHHEEECTTTCEEEECSCCC
T ss_pred CeEeeCCCCCCCcCCCcEEEEEECCCCCCCEEEEEEEEeCCCCCCcEEEEEEccCCCCCccceEEEeCCeeEEEECccCC
Confidence 4689999999999999999999999999999999999999999999999999852 367999999999999999999
Q ss_pred cccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecC
Q psy11780 243 RESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVN 308 (383)
Q Consensus 243 ~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvN 308 (383)
||.... |.|.|.|+|++. ++ ++++|+|+|+|+|
T Consensus 82 ~E~~~~----y~l~V~A~D~g~---------------------------~~--~~~~v~I~V~DvN 114 (114)
T 2ee0_A 82 REETAI----HKVTVLASDGSS---------------------------TP--ARATVTINVTDVN 114 (114)
T ss_dssp TTTCSE----EEEEEEEESSSS---------------------------SC--EEEEEEEEEECCC
T ss_pred cccCcE----EEEEEEEEECCC---------------------------Cc--eEEEEEEEEEECC
Confidence 999876 999999999997 43 7899999999998
No 34
>2yst_A Protocadherin-7; BH-PCDH, beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.91 E-value=1.8e-25 Score=182.03 Aligned_cols=116 Identities=26% Similarity=0.436 Sum_probs=101.5
Q ss_pred EeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeC
Q psy11780 33 SSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVD 111 (383)
Q Consensus 33 ~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~ 111 (383)
+|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|+|. +.|++++|+|....
T Consensus 3 ~V~DvNDn~P~F~---~~~y~~~v~E--n~~~Gt~v~~v~A~D~D~--------------------g~n~~i~Y~i~~~~ 57 (119)
T 2yst_A 3 SGSSGNDNSPRFE---KSVYEADLAE--NSAPGTPILQLRAADLDV--------------------GVNGQIEYVFGAAT 57 (119)
T ss_dssp CCCCSCCCCCCCS---SSEEEEEEET--TCCTTCEEEECCCCCSSS--------------------SCCSCCCCEECSCC
T ss_pred eEecCCCCCCCcC---CCcEEEEEEC--CCCCCCEEEEEEEEeCCC--------------------CCCCeEEEEEecCC
Confidence 34444 9999998 8899999999 999999999999999998 34779999995422
Q ss_pred CCCCCcEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCC
Q psy11780 112 GDEKDLFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPP 177 (383)
Q Consensus 112 ~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P 177 (383)
+...++|.|++.+ |.|+++++||||....|.|.|+|+|.|.+ .+++++.|+|+|.|+|||+|
T Consensus 58 ~~~~~~F~Id~~t--G~I~~~~~LD~E~~~~y~l~V~A~D~g~p--~~s~~~~v~I~V~DvNDn~P 119 (119)
T 2yst_A 58 ESVRRLLRLDETS--GWLSVLHRIDREEVNQLRFTVMARDRGQP--PKTDKATVVLNIKDENDNVP 119 (119)
T ss_dssp TTHHHHEEECTTT--CEEEECSCCCTTTCSEEEEEEEECCSBTT--BCCEEEEEEEEEECSTTCCC
T ss_pred CccccEEEEeCCc--eEEEECccCCcccCCEEEEEEEEEECCCC--CcEEEEEEEEEEEeccCCCC
Confidence 1124689999988 99999999999999999999999999886 56889999999999999998
No 35
>4apx_B Protocadherin-15, otocadherin; cell adhesion, hearing, deafness, CDH23, PCDH15; HET: MES; 1.65A {Mus musculus} PDB: 4aq8_C 4aqa_B* 4aqe_B* 4axw_B*
Probab=99.91 E-value=6.6e-24 Score=193.58 Aligned_cols=164 Identities=21% Similarity=0.249 Sum_probs=131.0
Q ss_pred ccEEEEcCCCCCCcEEEEEEEEe-CCCCCCceEEEEEecCCcccEEEeCCCceEEEc---ccCCcccccCCCceEEEEEE
Q psy11780 183 SSVTRVSEDVPVGTSVLQVKAVD-GDRGINNKILYSISSGSQGIFDIDPNTGNIFTL---KELDRESATSNNGAYILEIK 258 (383)
Q Consensus 183 ~~~~~v~E~~~~gt~v~~v~A~D-~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~---~~lD~E~~~~~~~~y~l~V~ 258 (383)
.+.+.|+|+++.|+.|..+.+.| .|.+.++.++|+|.+....+|.|++.+|.+++. +.||||.... |.+.+.
T Consensus 21 ~~~vsV~E~sp~GTvv~~~~~~~~~d~~~n~~i~ysl~~~~~~~f~id~~tg~~~l~~t~~~LDrE~~~~----~~~~~~ 96 (242)
T 4apx_B 21 ATIVAIDEESRNGTILVDNMLIKGTAGGPDPTIELSLKDNVDYWVLLDPVKQMLFLNSTGRVLDRDPPMN----IHSIVV 96 (242)
T ss_dssp SEEEEEETTCCTTCEEESCCCBSSCBSSSSCSEEEEEESCGGGCEEEETTTTEEEECCTTSCCCCSTTTC----CCEEEE
T ss_pred eEEEEeeCCCCCCCEEEEEEEecCCCCCCCCEEEEEEecCCCceEEECCCCCEEEEEecCCceeccCCCc----eEEEEE
Confidence 46789999999999988755544 455788999999997778899999999999874 6799999865 655555
Q ss_pred EEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCCCcceEEeec
Q psy11780 259 VTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVINTPVTFLGG 338 (383)
Q Consensus 259 a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~g~~v~~v~~ 338 (383)
+.+.+. ......+.+.|+|.|.|+|||+|.|.+..|.+.|+|++++|+.|.++..
T Consensus 97 ~v~~~~-------------------------~~~~~~~~~~V~I~V~DvNDn~P~F~~~~y~~~v~En~~~Gt~v~~~~~ 151 (242)
T 4apx_B 97 QVQCVN-------------------------KKVGTVIYHEVRIVVRDRNDNSPTFKHESYYATVNELTPVGTTIFTGFS 151 (242)
T ss_dssp EEEEEE-------------------------TTTCCEEEEEEEEEEECCCCCCCEESSSCEEEEEETTCCTTCEEECTTT
T ss_pred EEEeEC-------------------------CCCCeEEEEEEEEEEEeCCCCCCcccceeeeeEeeeccCCCCEEEEeee
Confidence 544432 0123566788999999999999999999999999999999999987432
Q ss_pred ccceEEeCCCCCCeEEEEEEeCC------CccEEEec-ccEEEE
Q psy11780 339 VVPQVFDYDQGKNGTFQMFIEGD------MGTFEITP-QKIINE 375 (383)
Q Consensus 339 ~~~~a~D~D~g~n~~i~y~l~~~------~~~F~I~~-~tG~~~ 375 (383)
....|+|+|.|.|++++|+|... .+.|.|++ .||...
T Consensus 152 ~~v~A~D~D~g~N~~v~Ysi~~~~~~~~~~~~F~Id~~~tG~i~ 195 (242)
T 4apx_B 152 GDNGATDIDDGPNGQIEYVIQYNPEDPTSNDTFEIPLMLTGNVV 195 (242)
T ss_dssp TTTSEECCSSGGGGCEEEEEECCTTSTTHHHHEECSSTTTCCEE
T ss_pred cccccccCCCCcCCceEEEEecCCCCcccccceEEcCCCceEEE
Confidence 22349999999999999999643 24799995 588654
No 36
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=1.1e-23 Score=172.34 Aligned_cols=113 Identities=22% Similarity=0.331 Sum_probs=104.7
Q ss_pred CCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecC-----CcccEEEeCCCceEEEcccCCccccc
Q psy11780 173 EDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSG-----SQGIFDIDPNTGNIFTLKELDRESAT 247 (383)
Q Consensus 173 NDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~-----~~~~F~Id~~tG~i~~~~~lD~E~~~ 247 (383)
+.+.|.|....|.+.+.|+.++|+.|++|. +|+|.+.|+.++|+|.++ ..++|.|++.+|.|++.++||||..+
T Consensus 6 ~r~~p~f~~~~~~v~e~e~~~~gt~v~~v~-~D~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~ 84 (123)
T 2yqg_A 6 SGQKRAWITAPVALREGEDLSKKNPIAKIH-SDLAEERGLKITYKYTGKGITEPPFGIFVFNKDTGELNVTSILDREETP 84 (123)
T ss_dssp SCSCCSSCCCCEEEESSSCCCSSCCCBCCC-CHHHHHHTCCCEEEEEEBTTTBSSCSSEEEETTTTEEEECSCCBTTTBS
T ss_pred cccCCccCCCCEEEEecCCCCCCCEEEEEE-ECCCCCCCceEEEEEecCCCCCCcCCCEEEeCCcCEEEECcccCcccCc
Confidence 578999999999999999999999999999 699999999999999874 25799999999999999999999998
Q ss_pred CCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCC
Q psy11780 248 SNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSP 317 (383)
Q Consensus 248 ~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~ 317 (383)
. |.|.|.|+|.+. |++++++.|.|+|+|+|||+|.|.++
T Consensus 85 ~----y~l~V~A~D~g~---------------------------p~~~~~~~v~I~V~DvNDn~P~F~~~ 123 (123)
T 2yqg_A 85 F----FLLTGYALDARG---------------------------NNVEKPLELRIKVLDINDNEPVFTQD 123 (123)
T ss_dssp E----EEEEEEEECTTC---------------------------CEEEEEECCEEEEECTTCCCCCCCCC
T ss_pred e----EEEEEEEEECCC---------------------------CceEEEEEEEEEEEEcCCCCCEeCCC
Confidence 7 999999999997 77899999999999999999999763
No 37
>2ee0_A Protocadherin-9; Ca domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=1.3e-22 Score=163.75 Aligned_cols=110 Identities=26% Similarity=0.447 Sum_probs=95.6
Q ss_pred EeecC-CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeC
Q psy11780 33 SSVSG-NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVD 111 (383)
Q Consensus 33 ~v~~~-Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~ 111 (383)
+|.|. ||+|+|. +..|.++|+| ++++|+.|+++.|+|+|.+ .|++++|+|....
T Consensus 3 ~V~DvNDn~P~F~---~~~y~~~v~E--n~~~Gt~v~~v~A~D~D~g--------------------~n~~i~Y~i~~~~ 57 (114)
T 2ee0_A 3 SGSSGNDNRPVFK---EGQVEVHIPE--NAPVGTSVIQLHATDADIG--------------------SNAEIRYIFGAQV 57 (114)
T ss_dssp CCCCCCCCCCCCS---CSEEEEEEET--TCCTTCEEEECCCCSCSSC--------------------CCSCCEEEECSSC
T ss_pred eEeeCCCCCCCcC---CCcEEEEEEC--CCCCCCEEEEEEEEeCCCC--------------------CCcEEEEEEccCC
Confidence 34455 9999998 8899999999 9999999999999999983 4779999995311
Q ss_pred -CCCCCcEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcC
Q psy11780 112 -GDEKDLFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVE 173 (383)
Q Consensus 112 -~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvN 173 (383)
++..++|.|++.+ |.|+++++||||....|.|.|.|+|.|++ +++++|+|+|+|+|
T Consensus 58 ~~~~~~~F~Id~~t--G~I~~~~~LD~E~~~~y~l~V~A~D~g~~----~~~~~v~I~V~DvN 114 (114)
T 2ee0_A 58 APATKRLFALNNTT--GLITVQRSLDREETAIHKVTVLASDGSST----PARATVTINVTDVN 114 (114)
T ss_dssp CHHHHHHEEECTTT--CEEEECSCCCTTTCSEEEEEEEEESSSSS----CEEEEEEEEEECCC
T ss_pred CCCccceEEEeCCe--eEEEECccCCcccCcEEEEEEEEEECCCC----ceEEEEEEEEEECC
Confidence 2345799999988 99999999999999999999999999875 27899999999997
No 38
>2yqg_A Desmoglein-2, HDGC; cadherin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=3.1e-22 Score=163.63 Aligned_cols=115 Identities=21% Similarity=0.312 Sum_probs=98.9
Q ss_pred CCCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeC--CCC
Q psy11780 37 GNRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVD--GDE 114 (383)
Q Consensus 37 ~Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~--~~~ 114 (383)
..++|.|. ...|.+.+.| ++++|+.|++|. +|+|. +.|+.++|+|.... .+.
T Consensus 6 ~r~~p~f~---~~~~~v~e~e--~~~~gt~v~~v~-~D~D~--------------------g~n~~i~Y~i~~~~~~~~~ 59 (123)
T 2yqg_A 6 SGQKRAWI---TAPVALREGE--DLSKKNPIAKIH-SDLAE--------------------ERGLKITYKYTGKGITEPP 59 (123)
T ss_dssp SCSCCSSC---CCCEEEESSS--CCCSSCCCBCCC-CHHHH--------------------HHTCCCEEEEEEBTTTBSS
T ss_pred cccCCccC---CCCEEEEecC--CCCCCCEEEEEE-ECCCC--------------------CCCceEEEEEecCCCCCCc
Confidence 37999998 6677666555 999999999999 68887 45779999996531 134
Q ss_pred CCcEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEec
Q psy11780 115 KDLFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVA 181 (383)
Q Consensus 115 ~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~ 181 (383)
.++|.|++.+ |.|+++++||||+...|.|+|.|+|.|.+ .+++++.|.|.|.|+|||+|.|.+
T Consensus 60 ~~~F~Id~~t--G~i~~~~~LDrE~~~~y~l~V~A~D~g~p--~~~~~~~v~I~V~DvNDn~P~F~~ 122 (123)
T 2yqg_A 60 FGIFVFNKDT--GELNVTSILDREETPFFLLTGYALDARGN--NVEKPLELRIKVLDINDNEPVFTQ 122 (123)
T ss_dssp CSSEEEETTT--TEEEECSCCBTTTBSEEEEEEEEECTTCC--EEEEEECCEEEEECTTCCCCCCCC
T ss_pred CCCEEEeCCc--CEEEECcccCcccCceEEEEEEEEECCCC--ceEEEEEEEEEEEEcCCCCCEeCC
Confidence 6799999988 99999999999999999999999999876 578899999999999999999975
No 39
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.84 E-value=5.8e-21 Score=152.96 Aligned_cols=98 Identities=23% Similarity=0.388 Sum_probs=79.2
Q ss_pred ccEEEEcCCCCCCcE--EEEEEEEeCCCCCCceEEEEEecC-----CcccEEEeCCCceEEEcccCCcccccCCCceEEE
Q psy11780 183 SSVTRVSEDVPVGTS--VLQVKAVDGDRGINNKILYSISSG-----SQGIFDIDPNTGNIFTLKELDRESATSNNGAYIL 255 (383)
Q Consensus 183 ~~~~~v~E~~~~gt~--v~~v~A~D~D~~~n~~i~y~i~~~-----~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l 255 (383)
.|.++|+|++++|+. |+++ |.|.+.|+.++|+|.++ ..++|.|++.+|.|++.++||||..+. |.|
T Consensus 6 ~~~~~v~En~~~gt~~~v~~v---d~D~g~n~~i~Y~i~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l 78 (110)
T 1ncg_A 6 IPPINLPENSRGPFPQELVRI---RSGRDKNLSLRYSVTGPGADQPPTGIFIINPISGQLSVTKPLDRELIAR----FHL 78 (110)
T ss_dssp CCCEEECSSCCCCSSEEEEEC---CCGGGGGSCCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCE----EEE
T ss_pred eeeEEEeCCCCCCCcEEEEEE---eCCCCCCCEEEEEEeCCCCCCCcCCEEEEECCCCEEEECCcCCcccCCe----EEE
Confidence 367899999999995 5554 77888899999999863 367999999999999999999999877 999
Q ss_pred EEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcc
Q psy11780 256 EIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTF 314 (383)
Q Consensus 256 ~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f 314 (383)
.|.|+|.+. |++++++.|.|+|+|+|||+|.|
T Consensus 79 ~V~A~D~g~---------------------------p~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 79 RAHAVDING---------------------------NQVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp EEEEECTTS---------------------------CBCSCCEEEEEEEC---------
T ss_pred EEEEEECCC---------------------------CceeeEEEEEEEEEECCCCCCCC
Confidence 999999998 77899999999999999999998
No 40
>1ncg_A N-cadherin; cell adhesion protein; 2.10A {Mus musculus} SCOP: b.1.6.1 PDB: 1nch_A 1nci_A
Probab=99.80 E-value=6.1e-20 Score=146.97 Aligned_cols=101 Identities=25% Similarity=0.363 Sum_probs=77.3
Q ss_pred eEEEEEecCCCCCCCeE--EEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeee--CCCCCCcEEEEeecc
Q psy11780 50 EIVIRLKEGPDTPAGTF--IYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENV--DGDEKDLFSISTVNG 125 (383)
Q Consensus 50 ~~~~~v~E~~~~~~g~~--i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~--~~~~~~~F~I~~~t~ 125 (383)
.|.++|+| ++++|+. |+++ |.|. +.|++++|+|... +++..+.|.|++.+
T Consensus 6 ~~~~~v~E--n~~~gt~~~v~~v---d~D~--------------------g~n~~i~Y~i~~~~~~~~~~~~F~Id~~t- 59 (110)
T 1ncg_A 6 IPPINLPE--NSRGPFPQELVRI---RSGR--------------------DKNLSLRYSVTGPGADQPPTGIFIINPIS- 59 (110)
T ss_dssp CCCEEECS--SCCCCSSEEEEEC---CCGG--------------------GGGSCCEEEEESBTTTBSSTTSEEECTTT-
T ss_pred eeeEEEeC--CCCCCCcEEEEEE---eCCC--------------------CCCCEEEEEEeCCCCCCCcCCEEEEECCC-
Confidence 56789999 9999995 5555 5555 3467999999642 23557899999988
Q ss_pred eEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeE
Q psy11780 126 KGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEF 179 (383)
Q Consensus 126 ~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f 179 (383)
|.|+++++||||+...|.|.|.|+|.|.+ .+++++.|+|+|.|+|||+|.|
T Consensus 60 -G~i~~~~~LDrE~~~~y~l~V~A~D~g~p--~~~~~~~v~I~V~DvNDn~P~F 110 (110)
T 1ncg_A 60 -GQLSVTKPLDRELIARFHLRAHAVDINGN--QVENPIDIVINVIDMNDNRPEF 110 (110)
T ss_dssp -CEEEECSCCCTTTCCEEEEEEEEECTTSC--BCSCCEEEEEEEC---------
T ss_pred -CEEEECCcCCcccCCeEEEEEEEEECCCC--ceeeEEEEEEEEEECCCCCCCC
Confidence 99999999999999999999999999876 5678999999999999999998
No 41
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.78 E-value=2.3e-20 Score=152.67 Aligned_cols=109 Identities=23% Similarity=0.297 Sum_probs=90.0
Q ss_pred CccEEEEcCCCCCCcEEEEEEEEeCCCCCCceE---EEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 182 VSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKI---LYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 182 ~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i---~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
..|.++|+|+.++|+.|+++ |+|+|.+. +.+ +|+|.++. .++|.||+.+|.|++.++||||........|.|.+
T Consensus 11 ~~~~~~V~E~~~~Gt~V~~v-a~D~d~~~-~~i~~~~Y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~c~~~~~y~l~v 88 (125)
T 1wyj_A 11 ATITYSVLEETDRGSLVGNL-AKDLGLSL-RELITRGAQILSKGNKQLLQLEQKSGNLLLKEKLDREELCGSTNPCILHF 88 (125)
T ss_dssp CCCCEEECSSCCTTCEEEES-TTTTTCCH-HHHHHTTCEEECSSSSCSEEECSSSSEEEESSCCCSTTTCTTCSSCCBCC
T ss_pred ceEEEEEECCCCCCCEEEEE-EecCCCCC-CceeeEEEEEecCCCCCeEEEECCccEEEECccccchhhcccCCcEEEEE
Confidence 45678999999999999999 99988763 345 89997643 78999999999999999999999822222399999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEE
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAE 322 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~ 322 (383)
+|.+... ...+.|.|+|+|+|||+|.|.++.|.++
T Consensus 89 ~a~~~~p------------------------------~~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 89 QVLLKSP------------------------------VQFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEEETTT------------------------------TEEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEEECCC------------------------------CeEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 9997432 3578999999999999999999887653
No 42
>1wyj_A Protocadherin beta 14; SS bond, structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Mus musculus}
Probab=99.74 E-value=1.3e-19 Score=148.16 Aligned_cols=109 Identities=22% Similarity=0.243 Sum_probs=89.4
Q ss_pred eeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEE
Q psy11780 49 TEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGV 128 (383)
Q Consensus 49 ~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~ 128 (383)
..|.++|+| +.++|+.|+++ |+|.|.+. +....+.|+|. .++..++|.|++.+ |.
T Consensus 11 ~~~~~~V~E--~~~~Gt~V~~v-a~D~d~~~------------------~~i~~~~Y~i~--~~~~~~~F~Id~~t--G~ 65 (125)
T 1wyj_A 11 ATITYSVLE--ETDRGSLVGNL-AKDLGLSL------------------RELITRGAQIL--SKGNKQLLQLEQKS--GN 65 (125)
T ss_dssp CCCCEEECS--SCCTTCEEEES-TTTTTCCH------------------HHHHHTTCEEE--CSSSSCSEEECSSS--SE
T ss_pred ceEEEEEEC--CCCCCCEEEEE-EecCCCCC------------------CceeeEEEEEe--cCCCCCeEEEECCc--cE
Confidence 356678999 99999999999 99998742 00012278884 35557899999998 99
Q ss_pred EEEcccCCCCCC----cEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEE
Q psy11780 129 IKLIGKLDYENK----FLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTR 187 (383)
Q Consensus 129 I~~~~~LD~E~~----~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~ 187 (383)
|+++++||||+. ..|.|.|.|.+.. | . ..+.|.|.|+|+|||+|.|.+..|.++
T Consensus 66 i~~~~~LDRE~~c~~~~~y~l~v~a~~~~-p---~-~~~~V~I~V~DvNDN~P~F~~~~y~vs 123 (125)
T 1wyj_A 66 LLLKEKLDREELCGSTNPCILHFQVLLKS-P---V-QFIQGEIQLQDVNDHAPEFMEDESGPS 123 (125)
T ss_dssp EEESSCCCSTTTCTTCSSCCBCCEEEETT-T---T-EEECCCEEECCCCCCCCCCCCCCCCCC
T ss_pred EEECccccchhhcccCCcEEEEEEEEECC-C---C-eEEEEEEEEEEccCCCCcCCCcEEEEe
Confidence 999999999999 9999999999743 2 2 478999999999999999999988754
No 43
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.73 E-value=1.1e-17 Score=131.02 Aligned_cols=90 Identities=29% Similarity=0.394 Sum_probs=81.8
Q ss_pred cEEEEcCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEE
Q psy11780 184 SVTRVSEDVP--VGTSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVT 260 (383)
Q Consensus 184 ~~~~v~E~~~--~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~ 260 (383)
+.++|+||.+ .|+.|++|. +|+|.| |++++|+|.++. .++|.||+.+|.|++.++||||..+. |.|+|.|+
T Consensus 6 ~~~~v~En~~~~~g~~v~~v~-~D~D~g-Ng~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~V~A~ 79 (99)
T 1zvn_A 6 NQFFVLEEYTGTDPLYVGKLH-SDMDRG-DGSIKYILSGEGAGIVFTIDDTTGDIHAIQRLDREERSQ----YTLRAQAL 79 (99)
T ss_dssp CEEEEEGGGCSSSCEEEEECC-BTTCCS-SSCEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSE----EEEEEEEE
T ss_pred cEEEEECCCCCCCCcEEEEEE-ECCCCC-CCEEEEEEeCCCCCceEEEeCCCCCEEECeecCCccCCe----EEEEEEEE
Confidence 4678999976 689999999 999999 999999998755 47899999999999999999999987 99999999
Q ss_pred eCC-CCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 261 EES-KTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 261 D~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
|.| + |++++.+.|.|+|.|
T Consensus 80 D~G~~---------------------------p~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 80 DRRTG---------------------------RPMEPESEFIIKIQD 99 (99)
T ss_dssp ETTTC---------------------------CBSSCCEEEEEEEEC
T ss_pred ECCCC---------------------------CCcceeEEEEEEEeC
Confidence 998 5 678999999999987
No 44
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.72 E-value=2.7e-17 Score=128.54 Aligned_cols=91 Identities=29% Similarity=0.386 Sum_probs=79.6
Q ss_pred cEEEEcCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEE
Q psy11780 184 SVTRVSEDVP--VGTSVLQVKAVDGDRGINNKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVT 260 (383)
Q Consensus 184 ~~~~v~E~~~--~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~ 260 (383)
+.++|+||.+ .|+.|+++. +|+|.| |++++|+|.++. .++|.||+.+|.|++.++||||..+. |.|+|.|+
T Consensus 5 ~~~~v~En~~~p~~~~v~~v~-~D~D~g-N~~v~Ysi~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v~A~ 78 (98)
T 1zxk_A 5 NQMFVLEEFSGPEPILVGRLH-TDLDPG-SKKIKYILSGDGAGTIFQINDITGDIHAIKRLDREEKAE----YTLTAQAV 78 (98)
T ss_dssp CEEEECGGGCSSSCEEEEECC-BCCCCC---CEEEEEEETTBTTTEEECTTTCEEEECSCCCTTTCSE----EEEEEEEE
T ss_pred ceEEEECCCCCCCCeEEEEEE-ECCCCC-CCEEEEEEeCCCCCCEEEEECCccEEEECccCCCcCCCe----EEEEEEEE
Confidence 5678999995 899999997 999999 999999998764 45899999999999999999999987 99999999
Q ss_pred eCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 261 EESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 261 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
|+|. +|++++++.|.|+|+|
T Consensus 79 D~g~--------------------------~~~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 79 DFET--------------------------NKPLEPPSEFIIKVQD 98 (98)
T ss_dssp ETTT--------------------------CCBSSCCEEEEEEECC
T ss_pred ECCC--------------------------CCCcceeEEEEEEEEC
Confidence 9985 2568899999999987
No 45
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.70 E-value=2.4e-17 Score=129.19 Aligned_cols=91 Identities=23% Similarity=0.273 Sum_probs=79.5
Q ss_pred EEEEEecCCCCCC--CeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEee--eCCCCCCcEEEEeecce
Q psy11780 51 IVIRLKEGPDTPA--GTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLEN--VDGDEKDLFSISTVNGK 126 (383)
Q Consensus 51 ~~~~v~E~~~~~~--g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~--~~~~~~~~F~I~~~t~~ 126 (383)
+.++|+| |.++ |+.|++|+|+|+|. +++|+|.. .++++.+.|.|++.+
T Consensus 5 ~~~~V~E--n~~~~~g~~v~~v~A~D~D~------------------------~i~Ysi~~~~~~~~~~~~F~Id~~t-- 56 (99)
T 3k6d_A 5 PSISIPE--NQRIPFPKIVGRVVVSDRIP------------------------GSKIKLYGKGVDQEPKGIFKINENS-- 56 (99)
T ss_dssp CCEEEET--TCCSCSSEEEEECBCSSCCT------------------------TCEEEEESBTTTBSSTTSEEECTTT--
T ss_pred CcEEEeC--CCCCCCCcEEEEEEEECCCC------------------------cEEEEEecCcCCCCCCCEEEEECCc--
Confidence 3578999 9999 99999999999998 46677754 245667899999998
Q ss_pred EEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEE
Q psy11780 127 GVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 127 G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~D 171 (383)
|.|++.++||||+.+.|.|.|.|+|.|++ .+++++.|+|+|.|
T Consensus 57 G~i~~~~~LDrE~~~~y~l~V~A~D~g~~--~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 57 GEVSVTKALDREAIPSYQLQVETTDENGK--TIEGPVDLEILVID 99 (99)
T ss_dssp CEEEECSCCCTTTCCEEEEEEEEECTTCC--EEEEEEEEEEEEEC
T ss_pred eEEEECcCCCcccCceEEEEEEEEECCCC--ceeeEEEEEEEEEC
Confidence 99999999999999999999999999876 57889999999987
No 46
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.67 E-value=1.6e-16 Score=124.72 Aligned_cols=90 Identities=24% Similarity=0.285 Sum_probs=77.9
Q ss_pred EEEEecCCCCCC--CeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeee--CCCCCCcEEEEeecceE
Q psy11780 52 VIRLKEGPDTPA--GTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENV--DGDEKDLFSISTVNGKG 127 (383)
Q Consensus 52 ~~~v~E~~~~~~--g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~--~~~~~~~F~I~~~t~~G 127 (383)
.++|+| |.+. |+.|++|.|+|+|. +++|+|... ++++.+.|.|++.+ |
T Consensus 7 ~~~V~E--N~~~~~g~~v~~V~A~D~D~------------------------~i~Ysi~~~~~~~~~~~~F~Id~~t--G 58 (100)
T 3k6f_A 7 PILIPE--NQRQPFPRDVGKVVDSDRPE------------------------GSKFRLTGKGVDQDPKGTFRINENT--G 58 (100)
T ss_dssp CEEEET--TCCSSSCEEEEECEETTCCT------------------------TCEEEEEEBTTTBSSTTSEEECTTT--C
T ss_pred cEEEeC--CCCCCCCcEEEEEEEEcCCC------------------------CEEEEEeCCCCCCCcCCEEEEECCC--C
Confidence 468999 8887 89999999999998 356666532 24557899999998 9
Q ss_pred EEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEE
Q psy11780 128 VIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 128 ~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~D 171 (383)
.|++.++||||+...|.|.|.|+|.|++ .++++++|+|.|+|
T Consensus 59 ~i~~~~~LDrE~~~~y~l~V~A~D~g~p--~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 59 SVSVTRTLDRETIATYQLYVETTDASGK--TLEGPVPLEVIVID 100 (100)
T ss_dssp EEEECSCCCTTTCSEEEEEEEEECTTCC--EEEEEEEEEEEEEC
T ss_pred EEEECcccCCcCCCEEEEEEEEEECCCC--cccceEEEEEEEEC
Confidence 9999999999999999999999999876 57889999999987
No 47
>1zvn_A Mn-cadherin; strand dimer, ----; 2.16A {Gallus gallus}
Probab=99.67 E-value=1.3e-16 Score=124.90 Aligned_cols=91 Identities=24% Similarity=0.342 Sum_probs=79.4
Q ss_pred EEEEEecCCCCC--CCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEE
Q psy11780 51 IVIRLKEGPDTP--AGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGV 128 (383)
Q Consensus 51 ~~~~v~E~~~~~--~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~ 128 (383)
+.++|+| |.+ .|+.|+++. +|+|. | |++++|+|.. +...+.|.|++.+ |.
T Consensus 6 ~~~~v~E--n~~~~~g~~v~~v~-~D~D~--------------------g-Ng~v~Ysi~~--~~~~~~F~Id~~t--G~ 57 (99)
T 1zvn_A 6 NQFFVLE--EYTGTDPLYVGKLH-SDMDR--------------------G-DGSIKYILSG--EGAGIVFTIDDTT--GD 57 (99)
T ss_dssp CEEEEEG--GGCSSSCEEEEECC-BTTCC--------------------S-SSCEEEEEEE--TTBTTTEEECTTT--CE
T ss_pred cEEEEEC--CCCCCCCcEEEEEE-ECCCC--------------------C-CCEEEEEEeC--CCCCceEEEeCCC--CC
Confidence 4678999 865 789999999 99998 6 7899999954 3445789999988 99
Q ss_pred EEEcccCCCCCCcEEEEEEEEEeCC-CCCCCCeeEEEEEEEEEE
Q psy11780 129 IKLIGKLDYENKFLYQLKILAVDRS-NNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 129 I~~~~~LD~E~~~~~~l~V~a~D~~-~~~~~~~~~~~v~I~V~D 171 (383)
|++.++||||+.+.|.|+|.|+|.| +| ++++++.|.|+|.|
T Consensus 58 i~~~~~LDrE~~~~y~l~V~A~D~G~~p--~l~~~~~v~I~V~D 99 (99)
T 1zvn_A 58 IHAIQRLDREERSQYTLRAQALDRRTGR--PMEPESEFIIKIQD 99 (99)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTTCC--BSSCCEEEEEEEEC
T ss_pred EEECeecCCccCCeEEEEEEEEECCCCC--CcceeEEEEEEEeC
Confidence 9999999999999999999999998 45 56889999999987
No 48
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.67 E-value=2.7e-16 Score=123.19 Aligned_cols=90 Identities=21% Similarity=0.296 Sum_probs=77.8
Q ss_pred EEEEecCCCCCCC--eEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeee--CCCCCCcEEEEeecceE
Q psy11780 52 VIRLKEGPDTPAG--TFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENV--DGDEKDLFSISTVNGKG 127 (383)
Q Consensus 52 ~~~v~E~~~~~~g--~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~--~~~~~~~F~I~~~t~~G 127 (383)
.++|+| |.+.| +.|++|.|+|+|. +++|+|... ++++.+.|.|++.+ |
T Consensus 6 ~~~v~E--N~~~g~~~~v~~V~A~D~D~------------------------~i~Ysi~~~~~~~~~~~~F~Id~~t--G 57 (99)
T 3k6i_A 6 PILIPE--NQRPPFPRSVGKVIRSEGTE------------------------GAKFRLSGKGVDQDPKGIFRINEIS--G 57 (99)
T ss_dssp CEEEET--TCCSSSCEEEEECEETTCCS------------------------SEEEEEESBTTTBSSTTSEEECTTT--C
T ss_pred cEEEeC--CCCCCCCeEEEEEEEEcCCC------------------------eEEEEEeCCCCCCCcCCEEEEECCC--c
Confidence 367899 98886 9999999999998 466777532 34556899999998 9
Q ss_pred EEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEE
Q psy11780 128 VIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 128 ~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~D 171 (383)
.|++.++||||+...|.|.|.|+|.|++ .++++++|.|.|.|
T Consensus 58 ~i~~~~~LDrE~~~~y~l~v~A~D~g~~--~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 58 DVSVTRPLDREAIANYELEVEVTDLSGK--IIDGPVRLDISVID 99 (99)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEEETTSC--EEEEEEEEEEEEEC
T ss_pred EEEECcccCCccCCEEEEEEEEEECCCC--ceeeeEEEEEEEEC
Confidence 9999999999999999999999999876 57889999999987
No 49
>3k6d_A T-cadherin; cell adhesion; 1.80A {Xenopus laevis} PDB: 2v37_A
Probab=99.67 E-value=1.5e-16 Score=124.61 Aligned_cols=88 Identities=25% Similarity=0.382 Sum_probs=80.0
Q ss_pred cEEEEcCCCCC--CcEEEEEEEEeCCCCCCceEEEEEecC-----CcccEEEeCCCceEEEcccCCcccccCCCceEEEE
Q psy11780 184 SVTRVSEDVPV--GTSVLQVKAVDGDRGINNKILYSISSG-----SQGIFDIDPNTGNIFTLKELDRESATSNNGAYILE 256 (383)
Q Consensus 184 ~~~~v~E~~~~--gt~v~~v~A~D~D~~~n~~i~y~i~~~-----~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~ 256 (383)
+.++|+||.++ |+.|++|.|+|+|. .++|+|.+. ..+.|.||+.+|.|++.++||||..+. |.|.
T Consensus 5 ~~~~V~En~~~~~g~~v~~v~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~ 76 (99)
T 3k6d_A 5 PSISIPENQRIPFPKIVGRVVVSDRIP----GSKIKLYGKGVDQEPKGIFKINENSGEVSVTKALDREAIPS----YQLQ 76 (99)
T ss_dssp CCEEEETTCCSCSSEEEEECBCSSCCT----TCEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCE----EEEE
T ss_pred CcEEEeCCCCCCCCcEEEEEEEECCCC----cEEEEEecCcCCCCCCCEEEEECCceEEEECcCCCcccCce----EEEE
Confidence 35789999999 99999999999996 799999852 157999999999999999999999987 9999
Q ss_pred EEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 257 IKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 257 V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
|.|+|+|+ +++++.+.|.|+|+|
T Consensus 77 V~A~D~g~---------------------------~~l~~~~~v~I~V~D 99 (99)
T 3k6d_A 77 VETTDENG---------------------------KTIEGPVDLEILVID 99 (99)
T ss_dssp EEEECTTC---------------------------CEEEEEEEEEEEEEC
T ss_pred EEEEECCC---------------------------CceeeEEEEEEEEEC
Confidence 99999988 778999999999987
No 50
>1zxk_A Cadherin-8; strand dimer, cell adhesion; 2.00A {Mus musculus} PDB: 2a4c_A
Probab=99.66 E-value=1.7e-16 Score=123.97 Aligned_cols=92 Identities=30% Similarity=0.402 Sum_probs=77.7
Q ss_pred EEEEEecCCCC--CCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEE
Q psy11780 51 IVIRLKEGPDT--PAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGV 128 (383)
Q Consensus 51 ~~~~v~E~~~~--~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~ 128 (383)
+.++|+| +. |.|+.|+++. +|+|. | |++++|+|.. +...+.|.|++.+ |.
T Consensus 5 ~~~~v~E--n~~~p~~~~v~~v~-~D~D~--------------------g-N~~v~Ysi~~--~~~~~~F~Id~~t--G~ 56 (98)
T 1zxk_A 5 NQMFVLE--EFSGPEPILVGRLH-TDLDP--------------------G-SKKIKYILSG--DGAGTIFQINDIT--GD 56 (98)
T ss_dssp CEEEECG--GGCSSSCEEEEECC-BCCCC--------------------C---CEEEEEEE--TTBTTTEEECTTT--CE
T ss_pred ceEEEEC--CCCCCCCeEEEEEE-ECCCC--------------------C-CCEEEEEEeC--CCCCCEEEEECCc--cE
Confidence 4678999 87 4899999997 99998 5 7899999964 3335689999988 99
Q ss_pred EEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEE
Q psy11780 129 IKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 129 I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~D 171 (383)
|++.++||||+.+.|.|+|.|+|.|.++ ++++++.|+|.|.|
T Consensus 57 i~~~~~LDrE~~~~y~l~v~A~D~g~~~-~l~~~~~v~I~V~D 98 (98)
T 1zxk_A 57 IHAIKRLDREEKAEYTLTAQAVDFETNK-PLEPPSEFIIKVQD 98 (98)
T ss_dssp EEECSCCCTTTCSEEEEEEEEEETTTCC-BSSCCEEEEEEECC
T ss_pred EEECccCCCcCCCeEEEEEEEEECCCCC-CcceeEEEEEEEEC
Confidence 9999999999999999999999998632 46888999999976
No 51
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.66 E-value=1.8e-16 Score=125.53 Aligned_cols=89 Identities=26% Similarity=0.394 Sum_probs=78.5
Q ss_pred EEEEcCCCC--CCcEEEEEEEEeCCCCCCceEEEEEecCC-----cccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 185 VTRVSEDVP--VGTSVLQVKAVDGDRGINNKILYSISSGS-----QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 185 ~~~v~E~~~--~gt~v~~v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
.++|+||.+ .|+.|+++.| | .+.|+.++|+|.++. .++|.||+.+|.|++.++||||..+. |.|+|
T Consensus 10 ~~~V~En~~~~~~~~v~~v~A-d--~g~N~~i~Ysi~~~~~~~~~~~~F~Id~~tG~I~~~~~LDrE~~~~----y~l~V 82 (105)
T 2omz_B 10 PISCPENEKGPFPKNLVQIKS-N--KDKEGKVFYSITGQGADTPPVGVFIIERETGWLKVTEPLDRERIAT----YTLFS 82 (105)
T ss_dssp CCCEESSCCSSSSEEEEECEE-G--GGGSSCCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCE----EEEEE
T ss_pred CEEEeCCCCCCCCcEEEEEEC-C--CCCCCeEEEEEeCCCCCCCccCEEEEeCCCCEEEECccCCcCCCCe----EEEEE
Confidence 468999998 5889999999 3 356999999998754 35899999999999999999999987 99999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeec
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDV 307 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~Dv 307 (383)
+|+|.|. |++++++.|.|+|+|+
T Consensus 83 ~A~D~g~---------------------------p~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 83 HAVSSNG---------------------------NAVEDPMEILITVTDQ 105 (105)
T ss_dssp EEECTTS---------------------------CBSSCCEEEEEEEEC-
T ss_pred EEEECCC---------------------------CceeeEEEEEEEEEeC
Confidence 9999998 7889999999999986
No 52
>3k6f_A T-cadherin; cell adhesion, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein, membrane; 1.81A {Mus musculus}
Probab=99.65 E-value=3.9e-16 Score=122.46 Aligned_cols=87 Identities=23% Similarity=0.360 Sum_probs=79.2
Q ss_pred EEEEcCCCCC--CcEEEEEEEEeCCCCCCceEEEEEecC-----CcccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 185 VTRVSEDVPV--GTSVLQVKAVDGDRGINNKILYSISSG-----SQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 185 ~~~v~E~~~~--gt~v~~v~A~D~D~~~n~~i~y~i~~~-----~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
.+.|+||.+. |+.|++|.|+|+|. .++|+|.+. ..+.|.||+.+|.|++.++||||.... |.|.|
T Consensus 7 ~~~V~EN~~~~~g~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~V 78 (100)
T 3k6f_A 7 PILIPENQRQPFPRDVGKVVDSDRPE----GSKFRLTGKGVDQDPKGTFRINENTGSVSVTRTLDRETIAT----YQLYV 78 (100)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCT----TCEEEEEEBTTTBSSTTSEEECTTTCEEEECSCCCTTTCSE----EEEEE
T ss_pred cEEEeCCCCCCCCcEEEEEEEEcCCC----CEEEEEeCCCCCCCcCCEEEEECCCCEEEECcccCCcCCCE----EEEEE
Confidence 5689999998 89999999999997 699999753 247999999999999999999999987 99999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
+|+|.|+ |++++.+.|.|+|+|
T Consensus 79 ~A~D~g~---------------------------p~l~~~~~v~I~V~D 100 (100)
T 3k6f_A 79 ETTDASG---------------------------KTLEGPVPLEVIVID 100 (100)
T ss_dssp EEECTTC---------------------------CEEEEEEEEEEEEEC
T ss_pred EEEECCC---------------------------CcccceEEEEEEEEC
Confidence 9999998 788999999999987
No 53
>3k6i_A T-cadherin; cell adhesion, alternative splicing, calcium, cell membrane, cleavage on PAIR of basic residues, glycoprotein, GPI-anchor, lipoprotein; 1.13A {Gallus gallus}
Probab=99.65 E-value=7.3e-16 Score=120.73 Aligned_cols=87 Identities=26% Similarity=0.384 Sum_probs=79.0
Q ss_pred EEEEcCCCCCC--cEEEEEEEEeCCCCCCceEEEEEecCC-----cccEEEeCCCceEEEcccCCcccccCCCceEEEEE
Q psy11780 185 VTRVSEDVPVG--TSVLQVKAVDGDRGINNKILYSISSGS-----QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEI 257 (383)
Q Consensus 185 ~~~v~E~~~~g--t~v~~v~A~D~D~~~n~~i~y~i~~~~-----~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V 257 (383)
.+.|+||.+.| +.|++|.|+|+|. .++|+|.+.. .+.|.||+.+|.|++.++||||.... |.|.|
T Consensus 6 ~~~v~EN~~~g~~~~v~~V~A~D~D~----~i~Ysi~~~~~~~~~~~~F~Id~~tG~i~~~~~LDrE~~~~----y~l~v 77 (99)
T 3k6i_A 6 PILIPENQRPPFPRSVGKVIRSEGTE----GAKFRLSGKGVDQDPKGIFRINEISGDVSVTRPLDREAIAN----YELEV 77 (99)
T ss_dssp CEEEETTCCSSSCEEEEECEETTCCS----SEEEEEESBTTTBSSTTSEEECTTTCEEEECSCCCTTTCCE----EEEEE
T ss_pred cEEEeCCCCCCCCeEEEEEEEEcCCC----eEEEEEeCCCCCCCcCCEEEEECCCcEEEECcccCCccCCE----EEEEE
Confidence 46899999986 8999999999997 7999998632 47999999999999999999999987 99999
Q ss_pred EEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEee
Q psy11780 258 KVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITD 306 (383)
Q Consensus 258 ~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~D 306 (383)
+|+|.|+ |++++.+.|.|+|+|
T Consensus 78 ~A~D~g~---------------------------~~l~~~~~v~I~V~D 99 (99)
T 3k6i_A 78 EVTDLSG---------------------------KIIDGPVRLDISVID 99 (99)
T ss_dssp EEEETTS---------------------------CEEEEEEEEEEEEEC
T ss_pred EEEECCC---------------------------CceeeeEEEEEEEEC
Confidence 9999998 788999999999987
No 54
>2omz_B Epithelial-cadherin; leucine-rich-repeat, nvasion protein, IG-like domain, adhesi protein, cell invasion-cell adhesion complex; 1.60A {Homo sapiens} SCOP: b.1.6.1 PDB: 2omt_B 2omu_B 2omv_B 1o6s_B 2omy_B 2omx_B 3ff8_A 3ff7_A 2omw_B
Probab=99.60 E-value=1.4e-15 Score=120.32 Aligned_cols=92 Identities=24% Similarity=0.270 Sum_probs=76.1
Q ss_pred EEEEecCCCCC--CCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCC--CCCCcEEEEeecceE
Q psy11780 52 VIRLKEGPDTP--AGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDG--DEKDLFSISTVNGKG 127 (383)
Q Consensus 52 ~~~v~E~~~~~--~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~--~~~~~F~I~~~t~~G 127 (383)
.++|+| |++ .|+.|+++.| |.+ .|++++|+|..... .+.+.|.|++.+ |
T Consensus 10 ~~~V~E--n~~~~~~~~v~~v~A-d~g----------------------~N~~i~Ysi~~~~~~~~~~~~F~Id~~t--G 62 (105)
T 2omz_B 10 PISCPE--NEKGPFPKNLVQIKS-NKD----------------------KEGKVFYSITGQGADTPPVGVFIIERET--G 62 (105)
T ss_dssp CCCEES--SCCSSSSEEEEECEE-GGG----------------------GSSCCEEEEEEBTTTBSSTTSEEECTTT--C
T ss_pred CEEEeC--CCCCCCCcEEEEEEC-CCC----------------------CCCeEEEEEeCCCCCCCccCEEEEeCCC--C
Confidence 467899 888 5889999999 322 26789999965321 125689999988 9
Q ss_pred EEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEc
Q psy11780 128 VIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDV 172 (383)
Q Consensus 128 ~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~Dv 172 (383)
.|++.++||||+.+.|.|+|.|+|.|++ .+++++.|+|.|.|+
T Consensus 63 ~I~~~~~LDrE~~~~y~l~V~A~D~g~p--~~~~~~~v~I~V~Dv 105 (105)
T 2omz_B 63 WLKVTEPLDRERIATYTLFSHAVSSNGN--AVEDPMEILITVTDQ 105 (105)
T ss_dssp EEEECSCCCTTTCCEEEEEEEEECTTSC--BSSCCEEEEEEEEC-
T ss_pred EEEECccCCcCCCCeEEEEEEEEECCCC--ceeeEEEEEEEEEeC
Confidence 9999999999999999999999999986 568899999999985
No 55
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.51 E-value=3.7e-15 Score=117.53 Aligned_cols=98 Identities=19% Similarity=0.330 Sum_probs=76.3
Q ss_pred CccEEEEcCCCCCCcEEEEEEEEeCCCCCC--ceEEEEEecCC-cccEEEeCCCceEEEcccCCcccccCCCceEEEEEE
Q psy11780 182 VSSVTRVSEDVPVGTSVLQVKAVDGDRGIN--NKILYSISSGS-QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIK 258 (383)
Q Consensus 182 ~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n--~~i~y~i~~~~-~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~ 258 (383)
..+.++|+|+.++|+.|++| |.|+|.+.+ ..++|+|.++. .++|.||+.+|.|++.++||||........|.+.++
T Consensus 3 ~~~~~~V~E~~~~Gt~Vg~v-a~D~~~~~~~~~~~~y~i~~~~~~~~F~Id~~tG~i~~~~~LDRE~~~~~~~~~~~~~~ 81 (103)
T 1wuz_A 3 SQIHYSIPEEAKHGTFVGRI-AQDLGLELTELVPRLFRVASKDRGDLLEVNLQNGILFVNSRIDREELCGRSAECSIHLE 81 (103)
T ss_dssp CEEEEEEESSCCTTCBCCCH-HHHHTCCHHHHTTTTBCCBCSSCSCSEEEETTTTEEEECSCCSHHHHCSSSSSCEEEEE
T ss_pred eeEEEEEECCCCCCCEEEEE-EeccCCCCcccccEEEEEEeCCCccEEEEECCeEEEEECCcCccccccCCCCcEEEEEE
Confidence 34678999999999999999 999886422 36899997644 789999999999999999999987321223556666
Q ss_pred EEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCC
Q psy11780 259 VTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDE 310 (383)
Q Consensus 259 a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn 310 (383)
|... . | . ..+.|.|+|+|+|||
T Consensus 82 v~~~-~---------------------------p-~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 82 VIVD-R---------------------------P-L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEET-T---------------------------T-T-EEEEEEEEEECCSCC
T ss_pred EEEC-C---------------------------C-C-EEEEEEEEEEEcCCC
Confidence 5543 2 2 2 478999999999998
No 56
>1wuz_A Pcdha4 protein, CNR-EC1; cadherin, heteronuclear protocadherin, cell adhesion; NMR {Mus musculus}
Probab=99.38 E-value=1.7e-14 Score=113.66 Aligned_cols=95 Identities=20% Similarity=0.390 Sum_probs=73.1
Q ss_pred eeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCcEEEEeecceEE
Q psy11780 49 TEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDLFSISTVNGKGV 128 (383)
Q Consensus 49 ~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~F~I~~~t~~G~ 128 (383)
..|.++|+| +.++|+.|++| |.|+|.+. +..+.+.|+|. .++..++|.|++.| |.
T Consensus 3 ~~~~~~V~E--~~~~Gt~Vg~v-a~D~~~~~------------------~~~~~~~y~i~--~~~~~~~F~Id~~t--G~ 57 (103)
T 1wuz_A 3 SQIHYSIPE--EAKHGTFVGRI-AQDLGLEL------------------TELVPRLFRVA--SKDRGDLLEVNLQN--GI 57 (103)
T ss_dssp CEEEEEEES--SCCTTCBCCCH-HHHHTCCH------------------HHHTTTTBCCB--CSSCSCSEEEETTT--TE
T ss_pred eeEEEEEEC--CCCCCCEEEEE-EeccCCCC------------------cccccEEEEEE--eCCCccEEEEECCe--EE
Confidence 356788999 99999999999 99988632 01124678884 35557899999998 99
Q ss_pred EEEcccCCCCCCc------EEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCC
Q psy11780 129 IKLIGKLDYENKF------LYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQ 175 (383)
Q Consensus 129 I~~~~~LD~E~~~------~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn 175 (383)
|+++++||||+.. .|.+.|.+ . .| . ..+.|.|.|+|+|||
T Consensus 58 i~~~~~LDRE~~~~~~~~~~~~~~v~~--~-~p---~-~~~~v~I~V~DiNDN 103 (103)
T 1wuz_A 58 LFVNSRIDREELCGRSAECSIHLEVIV--D-RP---L-QVFHVEVEVRDINDN 103 (103)
T ss_dssp EEECSCCSHHHHCSSSSSCEEEEEEEE--T-TT---T-EEEEEEEEEECCSCC
T ss_pred EEECCcCccccccCCCCcEEEEEEEEE--C-CC---C-EEEEEEEEEEEcCCC
Confidence 9999999999863 55666655 2 22 2 378999999999997
No 57
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=93.56 E-value=3.1 Score=35.37 Aligned_cols=104 Identities=13% Similarity=0.066 Sum_probs=56.3
Q ss_pred CCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCC---CC-cEEEEEEEEeCCCCCCceE
Q psy11780 139 NKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVP---VG-TSVLQVKAVDGDRGINNKI 214 (383)
Q Consensus 139 ~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~---~g-t~v~~v~A~D~D~~~n~~i 214 (383)
....|.|+++|.|..+. .+.+..+.|.|.+ ..+|... +.-+.+.. .| ..-....|.|.|.+ =.++
T Consensus 59 ~~G~htlta~A~D~aGn---~s~s~~v~vtV~~--~~~Ptv~-----itsP~~g~~~~~~~~vtl~~~AsD~~g~-V~~V 127 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGR---RIESPVTPVLVKV--IVKPTVK-----LTAPKSNVVAYGNEFLKITATASDSDGK-ISRV 127 (190)
T ss_dssp CSEEEEEEEEEEETTSC---EEECCCEEEEEEC--CCCCEEE-----EEECCTTCCCBTTSEEEEEEEEECSSSC-EEEE
T ss_pred CCccEEEEEEEEECCCC---EeeecceeEEecc--CCCCcee-----ecCCCCCcEEecCCeEEEEEEEECCCCc-EEEE
Confidence 35689999999999874 2333457777776 4688653 22333321 23 34456677776521 2344
Q ss_pred EEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCC
Q psy11780 215 LYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESK 264 (383)
Q Consensus 215 ~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~ 264 (383)
.|.+.+ ....-+. ++........ ..+.|.|+++|+|..+
T Consensus 128 e~~~dg---~~v~t~t-~~~y~~~~~~-------~~G~~tl~a~A~D~aG 166 (190)
T 3pdd_A 128 DFLVDG---EVIGSDR-EAPYEYEWKA-------VEGNHEISVIAYDDDD 166 (190)
T ss_dssp EEEETT---EEEEEEC-SSSEEEEEEC-------CSEEEEEEEEEEETTC
T ss_pred EEEECC---EEEeccc-CCCEEEEEec-------CCeeEEEEEEEEECCC
Confidence 455432 1121111 1111111111 1245999999999987
No 58
>3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A
Probab=91.89 E-value=5.3 Score=33.88 Aligned_cols=112 Identities=11% Similarity=0.086 Sum_probs=62.5
Q ss_pred eeeeEEEEeeeee------eeeEEEEEeecCCCCCeEEeCCCeeEEEEEecCCCC--CCCeEEEEEEEEcCCCCceEEEE
Q psy11780 13 KEKHVLLIGTYLL------LSAILVDSSVSGNRAPRFIIDEQTEIVIRLKEGPDT--PAGTFIYRLRGADPDGDVLTFGV 84 (383)
Q Consensus 13 ~~~~~~l~~~~~~------~~~~~~i~v~~~Dn~P~F~~~~~~~~~~~v~E~~~~--~~g~~i~~v~A~D~D~~~~~~~~ 84 (383)
..-.|.|+++|.| .+..+.+.+.. +.+|... +.-+..... .-+.+-+...|.|.|+.-
T Consensus 59 ~~G~htlta~A~D~aGn~s~s~~v~vtV~~-~~~Ptv~--------itsP~~g~~~~~~~~vtl~~~AsD~~g~V----- 124 (190)
T 3pdd_A 59 AVGAYNLKAVAVLSDGRRIESPVTPVLVKV-IVKPTVK--------LTAPKSNVVAYGNEFLKITATASDSDGKI----- 124 (190)
T ss_dssp CSEEEEEEEEEEETTSCEEECCCEEEEEEC-CCCCEEE--------EEECCTTCCCBTTSEEEEEEEEECSSSCE-----
T ss_pred CCccEEEEEEEEECCCCEeeecceeEEecc-CCCCcee--------ecCCCCCcEEecCCeEEEEEEEECCCCcE-----
Confidence 3457899999988 22346666654 6777653 333441111 234566778889887621
Q ss_pred EccccceEEEeecceeEEEEEEEeee--CCCCCCcEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeE
Q psy11780 85 QGHGHDVIRIENLNVMLKVVYHLENV--DGDEKDLFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGT 162 (383)
Q Consensus 85 ~~~~~~~~~i~~~~~~~~v~y~i~~~--~~~~~~~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~ 162 (383)
.++.|.+... .......|...-. . ....|.|+++|.|..+. .+.+
T Consensus 125 ----------------~~Ve~~~dg~~v~t~t~~~y~~~~~---------~-----~~G~~tl~a~A~D~aGn---~s~s 171 (190)
T 3pdd_A 125 ----------------SRVDFLVDGEVIGSDREAPYEYEWK---------A-----VEGNHEISVIAYDDDDA---ASTP 171 (190)
T ss_dssp ----------------EEEEEEETTEEEEEECSSSEEEEEE---------C-----CSEEEEEEEEEEETTCC---BCCC
T ss_pred ----------------EEEEEEECCEEEecccCCCEEEEEe---------c-----CCeeEEEEEEEEECCCC---EEec
Confidence 1344443100 0001122222111 1 45689999999999885 3446
Q ss_pred EEEEEEEEE
Q psy11780 163 AAILVKVQD 171 (383)
Q Consensus 163 ~~v~I~V~D 171 (383)
..|.|.|.+
T Consensus 172 ~~vtvtv~~ 180 (190)
T 3pdd_A 172 DSVKIFVKQ 180 (190)
T ss_dssp EEEEEEEBC
T ss_pred ceEEEEECC
Confidence 667777765
No 59
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=89.91 E-value=1.3 Score=36.63 Aligned_cols=81 Identities=15% Similarity=0.187 Sum_probs=59.7
Q ss_pred CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEEEEcCCCCceEEEEEccccceEEEeecceeEEEEEEEeeeCCCCCCc
Q psy11780 38 NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLRGADPDGDVLTFGVQGHGHDVIRIENLNVMLKVVYHLENVDGDEKDL 117 (383)
Q Consensus 38 Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~A~D~D~~~~~~~~~~~~~~~~~i~~~~~~~~v~y~i~~~~~~~~~~ 117 (383)
-+.|-|. +..|...++- +...|..+++|+=.|..+.. .+.|.- .+ ...
T Consensus 31 ~C~pGF~---~~~~~~~vp~--~l~~g~~lgkV~F~dC~g~~----------------------~~~~~s----sD-p~d 78 (159)
T 1op4_A 31 LCKTGFP---EDVYSAVLPK--DVHEGQPLLNVKFSNCNRKR----------------------KVQYES----SE-PAD 78 (159)
T ss_dssp CCCCBCC---SCEEEECCCC--SSCSSCCEEECCCBCCSSCC----------------------CEEEEC----CC-SSE
T ss_pred cccCCcC---cceeEEeccc--cccCCceeceeecccCCCCC----------------------ceeEEc----CC-CCC
Confidence 6779998 8888655555 78999999999988887643 444544 12 338
Q ss_pred EEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCC
Q psy11780 118 FSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSN 154 (383)
Q Consensus 118 F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~ 154 (383)
|.|+++ |.|++++++-.-.. .-.|.|.|.|...
T Consensus 79 FkV~~D---GtVya~r~v~L~~~-~~~F~V~a~D~~t 111 (159)
T 1op4_A 79 FKVDED---GTVYAVRSFPLTAE-QAKFLIYAQDKET 111 (159)
T ss_dssp EEEETT---TEEEEESCCSCSSS-CEEEEEEEEETTT
T ss_pred eEEeCC---CcEEEecceeecCC-CcEEEEEEEcCCC
Confidence 999998 99999999754332 2378899999643
No 60
>1op4_A Neural-cadherin; beta sandwich, cadherin-like domain, cell adhesion; NMR {Mus musculus} SCOP: b.1.6.1
Probab=88.62 E-value=3.5 Score=33.98 Aligned_cols=80 Identities=18% Similarity=0.277 Sum_probs=61.4
Q ss_pred CCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEE
Q psy11780 175 QPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYI 254 (383)
Q Consensus 175 n~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~ 254 (383)
..|-|.+..|...++-....|..+++|.-.|-. .+..+.|... +...|.|++ .|.|++++++-.-... -.
T Consensus 32 C~pGF~~~~~~~~vp~~l~~g~~lgkV~F~dC~--g~~~~~~~ss--Dp~dFkV~~-DGtVya~r~v~L~~~~-----~~ 101 (159)
T 1op4_A 32 CKTGFPEDVYSAVLPKDVHEGQPLLNVKFSNCN--RKRKVQYESS--EPADFKVDE-DGTVYAVRSFPLTAEQ-----AK 101 (159)
T ss_dssp CCCBCCSCEEEECCCCSSCSSCCEEECCCBCCS--SCCCEEEECC--CSSEEEEET-TTEEEEESCCSCSSSC-----EE
T ss_pred ccCCcCcceeEEeccccccCCceeceeecccCC--CCCceeEEcC--CCCCeEEeC-CCcEEEecceeecCCC-----cE
Confidence 579999999977788888999999999887664 3567878753 233899987 4999999887543322 68
Q ss_pred EEEEEEeCCC
Q psy11780 255 LEIKVTEESK 264 (383)
Q Consensus 255 l~V~a~D~~~ 264 (383)
+.|.|.|...
T Consensus 102 F~V~a~D~~t 111 (159)
T 1op4_A 102 FLIYAQDKET 111 (159)
T ss_dssp EEEEEEETTT
T ss_pred EEEEEEcCCC
Confidence 8999999654
No 61
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=86.07 E-value=20 Score=32.65 Aligned_cols=153 Identities=16% Similarity=0.103 Sum_probs=68.2
Q ss_pred CCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC---cccEEEeCCCceEEEcccCCcccccCC
Q psy11780 173 EDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS---QGIFDIDPNTGNIFTLKELDRESATSN 249 (383)
Q Consensus 173 NDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~---~~~F~Id~~tG~i~~~~~lD~E~~~~~ 249 (383)
+|+++.|.-..-...|.|+. |+.-..|.-. .+......+.|....+. ..-|. +.+|.|....- +..
T Consensus 6 dd~~g~i~F~~~~y~V~E~~--g~v~vtV~R~-g~~~~~vtV~y~T~~GTA~ag~Dy~--~~~gtl~F~~G---et~--- 74 (298)
T 3rb5_A 6 ADDPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGTASAGTDFV--GRKGLLSFPPG---VDE--- 74 (298)
T ss_dssp -----CEEESSSEEEEETTS--CCEECCEEEC-SCCSSCEEEEEEEEESSSCBTTTBC--CCEEEEEECTT---CCE---
T ss_pred CCCceEEEEeCCEEEEecCc--eEEEEEEEEE-CCCCccEEEEEEeeCCccCCCCCcc--ccceEEEECCC---ceE---
Confidence 45677776666667899984 5554444332 24333456788766543 11222 22354432211 000
Q ss_pred CceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCCcccCCceEEEEeCCCCC
Q psy11780 250 NGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETPTFRSPRYVAEIHENSVI 329 (383)
Q Consensus 250 ~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P~f~~~~y~~~V~E~~~~ 329 (383)
-.+.|...|... ......+.+.+.....+ ..+......+|+|.| ||++|.|....-...|.|+.
T Consensus 75 ---kti~V~I~dD~~-----~E~dEtF~v~Ls~p~~~-----a~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~-- 138 (298)
T 3rb5_A 75 ---QRFRIEVIDDDV-----FEEDECFYIRLFNPSEG-----VKLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV-- 138 (298)
T ss_dssp ---ECCEECBCCCSS-----CCCCEEEEEEEECCCTT-----CCBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--
T ss_pred ---EEEEEEEeCCCC-----ccCcEEEEEEEeCCCCC-----cEECCCceEEEEEec-cccccccccccccEEeecCC--
Confidence 112222222211 01122223322221000 112223356666676 57789876554467889985
Q ss_pred CcceEEeecccceEEeCCCCCCeEEEEEE
Q psy11780 330 NTPVTFLGGVVPQVFDYDQGKNGTFQMFI 358 (383)
Q Consensus 330 g~~v~~v~~~~~~a~D~D~g~n~~i~y~l 358 (383)
|.....+. ...+......+.|..
T Consensus 139 g~~~~~V~------Rs~~~~g~vtV~~~T 161 (298)
T 3rb5_A 139 GRFELKVM------RYSGARGTVIVPYWT 161 (298)
T ss_dssp CCEEEEEE------EESCCCSCEEEEEEE
T ss_pred ceEEEEEE------EEecCCCCEEEEEEe
Confidence 55555553 223333334577764
No 62
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=84.84 E-value=3.4 Score=39.78 Aligned_cols=49 Identities=10% Similarity=0.024 Sum_probs=33.5
Q ss_pred cEEEEeecceEEEEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEE
Q psy11780 117 LFSISTVNGKGVIKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKV 169 (383)
Q Consensus 117 ~F~I~~~t~~G~I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V 169 (383)
...|...+ ...+.+.-|-+ +....|.|.+.++|.+.| .+++...|+|+|
T Consensus 388 ~vtls~~~-~~~~sft~P~~-~~~~tl~f~LtVTD~~~p--~lTs~~rViVtV 436 (437)
T 2yhg_A 388 SVSISNSS-SASANVQIPSN-AGGKDIHILLTLRDNGSP--NLYAYRRVVINV 436 (437)
T ss_dssp CCCEETTT-SSEEEEECCTT-CTTCEEEEEEEEEECSSS--CCEEEEEEEEEE
T ss_pred ceEeecCC-CceEEEEeCCC-CCCcEEEEEEEEEeCCCC--CccEEeEEEEEe
Confidence 44554322 14566665544 456899999999999865 467788888877
No 63
>3rb5_A Na/Ca exchange protein; CBD12, calcium binding and regulation, metal binding protein; 2.35A {Drosophila melanogaster} PDB: 3rb7_A 3e9u_A
Probab=83.64 E-value=22 Score=32.42 Aligned_cols=77 Identities=18% Similarity=0.233 Sum_probs=43.7
Q ss_pred CCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEE
Q psy11780 137 YENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILY 216 (383)
Q Consensus 137 ~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y 216 (383)
+|....|.+.+..-..+. .+......+|+|.| ||++|.|.-..-..++.|+. |.....|.-+-. ....-.+.|
T Consensus 87 ~E~dEtF~v~Ls~p~~~a---~lg~~~~atvtI~d-dD~~g~~~f~~~~~~V~E~~--g~~~~~V~Rs~~-~~g~vtV~~ 159 (298)
T 3rb5_A 87 FEEDECFYIRLFNPSEGV---KLAVPMIATVMILD-DDHAGIFAFTDSVFEITESV--GRFELKVMRYSG-ARGTVIVPY 159 (298)
T ss_dssp CCCCEEEEEEEECCCTTC---CBCSCSEEEEEEEC-CCCCCEEECSCSEEEECTTC--CCEEEEEEEESC-CCSCEEEEE
T ss_pred ccCcEEEEEEEeCCCCCc---EECCCceEEEEEec-cccccccccccccEEeecCC--ceEEEEEEEEec-CCCCEEEEE
Confidence 566666666654322221 23333445666676 57799887766667899984 666555554432 222345667
Q ss_pred EEec
Q psy11780 217 SISS 220 (383)
Q Consensus 217 ~i~~ 220 (383)
+...
T Consensus 160 ~T~d 163 (298)
T 3rb5_A 160 WTEN 163 (298)
T ss_dssp EEEE
T ss_pred EecC
Confidence 6543
No 64
>2yhg_A SDE_182CT, cellulose-binding protein; hydrolase, glycoside hydrolase; HET: BTB; 1.08A {Saccharophagus degradans}
Probab=80.56 E-value=14 Score=35.63 Aligned_cols=92 Identities=18% Similarity=0.232 Sum_probs=56.0
Q ss_pred cCCCCCeEecCcc------EEEEcCCCCCCcEEEEEEE---EeCCCCCCceEEEEEecCCc-----ccEEEe-CCCceEE
Q psy11780 172 VEDQPPEFVAVSS------VTRVSEDVPVGTSVLQVKA---VDGDRGINNKILYSISSGSQ-----GIFDID-PNTGNIF 236 (383)
Q Consensus 172 vNDn~P~f~~~~~------~~~v~E~~~~gt~v~~v~A---~D~D~~~n~~i~y~i~~~~~-----~~F~Id-~~tG~i~ 236 (383)
.| ++|+..-..- ..++. .|..| ++.| +|+| +..++|+-..-.. ....|. +....+.
T Consensus 330 aN-haPVa~iag~~g~~p~~~~v~----aG~tV-tLdAs~SsDPD---GD~LtY~W~q~~g~g~~~~~vtls~~~~~~~s 400 (437)
T 2yhg_A 330 AN-HHPVPVVNNDANEAVMYLNAS----AGSTV-SLDASGSSDPD---GDSLNYSWSHYGEADSYSGSVSISNSSSASAN 400 (437)
T ss_dssp SC-CCCBCCBTTBCCSSCEEEEEC----TTCEE-EEECTTCBCTT---CCCEEEEEEECTTTSSCCSCCCEETTTSSEEE
T ss_pred CC-CCCEEEecCCCcccccceEec----CCCEE-EEEeeeeeCCC---CCeEEEEEEEeCCCCccccceEeecCCCceEE
Confidence 45 7888763221 33443 34433 4444 4777 3678887753221 245563 4445666
Q ss_pred EcccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEE
Q psy11780 237 TLKELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIII 304 (383)
Q Consensus 237 ~~~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V 304 (383)
...+-+- . +..|.|.++++|.+. |.+++...|.|+|
T Consensus 401 ft~P~~~-~----~~tl~f~LtVTD~~~---------------------------p~lTs~~rViVtV 436 (437)
T 2yhg_A 401 VQIPSNA-G----GKDIHILLTLRDNGS---------------------------PNLYAYRRVVINV 436 (437)
T ss_dssp EECCTTC-T----TCEEEEEEEEEECSS---------------------------SCCEEEEEEEEEE
T ss_pred EEeCCCC-C----CcEEEEEEEEEeCCC---------------------------CCccEEeEEEEEe
Confidence 5555442 2 234999999999997 6788888888887
No 65
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=75.89 E-value=5.2 Score=30.17 Aligned_cols=30 Identities=20% Similarity=0.571 Sum_probs=25.3
Q ss_pred ceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCC
Q psy11780 251 GAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVND 309 (383)
Q Consensus 251 ~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvND 309 (383)
+.|.|++.++|..+ .+++..+.|+|...+.
T Consensus 69 G~y~f~LTVtD~~G-----------------------------~s~s~~v~VtV~~~~~ 98 (102)
T 2yrl_A 69 GTYVFTLTVKDERN-----------------------------LQSQSSVNVIVKEESG 98 (102)
T ss_dssp SEEEEEEEEEBTTC-----------------------------CEEEEEEEEEEECCSS
T ss_pred eEEEEEEEEEeCCC-----------------------------CEEEeEEEEEEcCCCC
Confidence 45999999999987 6888899999987654
No 66
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=70.07 E-value=31 Score=25.67 Aligned_cols=29 Identities=10% Similarity=0.197 Sum_probs=22.2
Q ss_pred CcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEE
Q psy11780 140 KFLYQLKILAVDRSNNDRRNTGTAAILVKVQD 171 (383)
Q Consensus 140 ~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~D 171 (383)
.-.|.|.++|.|..+. ...+..|.|.|.+
T Consensus 60 ~G~htl~a~AtD~~G~---~~tS~~v~vtV~~ 88 (98)
T 3pe9_A 60 EGNHEISVIAYDDDDA---ASTPDSVKIFVKQ 88 (98)
T ss_dssp SEEEEEEEEEEETTCC---BCCCEEEEEEEEC
T ss_pred CccEEEEEEEEECCCC---EEeeeEEEEEECc
Confidence 4789999999999874 3446677777765
No 67
>2yrl_A KIAA1837 protein; PKD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=65.86 E-value=13 Score=27.95 Aligned_cols=31 Identities=16% Similarity=0.178 Sum_probs=26.3
Q ss_pred CCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcC
Q psy11780 139 NKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVE 173 (383)
Q Consensus 139 ~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvN 173 (383)
....|.|++.++|..+ .+++..+.|.|...+
T Consensus 67 ~~G~y~f~LTVtD~~G----~s~s~~v~VtV~~~~ 97 (102)
T 2yrl_A 67 QVGTYVFTLTVKDERN----LQSQSSVNVIVKEES 97 (102)
T ss_dssp CSSEEEEEEEEEBTTC----CEEEEEEEEEEECCS
T ss_pred CCeEEEEEEEEEeCCC----CEEEeEEEEEEcCCC
Confidence 4569999999999975 477899999999876
No 68
>3pe9_A Fibronectin(III)-like module; CBHA, beta-sandwich, cellulosome, unknown function; 1.69A {Clostridium thermocellum}
Probab=54.43 E-value=62 Score=24.00 Aligned_cols=58 Identities=10% Similarity=0.162 Sum_probs=30.3
Q ss_pred CcEEEEEEEEeCCCCCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCC
Q psy11780 195 GTSVLQVKAVDGDRGINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESK 264 (383)
Q Consensus 195 gt~v~~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~ 264 (383)
+.......|.|.|. .=.++.|.+.+. ...-+.. .+..+.-... .+.|.|.++|+|..+
T Consensus 17 ~~v~i~a~A~D~dg-~V~kVef~vdg~---~vg~dt~-------apy~~~w~~~-~G~htl~a~AtD~~G 74 (98)
T 3pe9_A 17 EFLKITATASDSDG-KISRVDFLVDGE---VIGSDRE-------APYEYEWKAV-EGNHEISVIAYDDDD 74 (98)
T ss_dssp SEEEEEEEECCSSS-CEEEEEEEETTE---EEEEECS-------SSEEEEEECC-SEEEEEEEEEEETTC
T ss_pred CEEEEEEEEEeCCC-CEEEEEEEECCE---Eeccccc-------CCEEEEEEcC-CccEEEEEEEEECCC
Confidence 34456677777663 234677777432 2222211 1111111111 245999999999987
No 69
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=52.63 E-value=42 Score=25.28 Aligned_cols=44 Identities=27% Similarity=0.242 Sum_probs=33.5
Q ss_pred EEEcccCCCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEEEcCCCC
Q psy11780 129 IKLIGKLDYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQDVEDQP 176 (383)
Q Consensus 129 I~~~~~LD~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~DvNDn~ 176 (383)
|.+.+..|..+.-.|.++..++|..+ ...+++.+|.|.+..+..
T Consensus 47 I~V~g~Vdt~k~G~Y~VtY~VtDs~G----n~~t~trtVtV~~~~e~~ 90 (103)
T 2kpn_A 47 IKVDGEVDTTKAGTYVLTYTVTDSKG----HEVTAKQTVTVKVREEVK 90 (103)
T ss_dssp CEEESCCCSSSCEEEEEEEEEECTTS----CEEEEEEEEEEECSSCCC
T ss_pred EEEeCcccCCCceEEEEEEEEEcCCC----CEEEEEEEEEEeCCCccc
Confidence 33445678888899999999999886 356788889998865433
No 70
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=51.36 E-value=26 Score=25.07 Aligned_cols=14 Identities=36% Similarity=0.719 Sum_probs=12.4
Q ss_pred ceEEEEEEEEeCCC
Q psy11780 251 GAYILEIKVTEESK 264 (383)
Q Consensus 251 ~~y~l~V~a~D~~~ 264 (383)
+.|.+++.++|..+
T Consensus 59 G~Y~v~LtVtd~~G 72 (85)
T 2y72_A 59 GTYNVTLKVTDDKG 72 (85)
T ss_dssp EEEEEEEEEEETTS
T ss_pred eEEEEEEEEEECCC
Confidence 45999999999887
No 71
>2kpn_A Bacillolysin; solution structure, BIG_3 domain, PF07523, PSI BIG-open NESG, cell WALL, hydrolase, peptidoglycan-anchor; NMR {Bacillus cereus atcc 14579}
Probab=50.39 E-value=30 Score=26.08 Aligned_cols=41 Identities=22% Similarity=0.358 Sum_probs=29.6
Q ss_pred ccCCcccccCCCceEEEEEEEEeCCCCCCCCCCCceeEEEEEeeecccccccCCCCceEEEEEEEEeecCCCCC
Q psy11780 239 KELDRESATSNNGAYILEIKVTEESKTVQPAPTAKTEVTIIITDVTEESKTVQPAPTAKTEVTIIITDVNDETP 312 (383)
Q Consensus 239 ~~lD~E~~~~~~~~y~l~V~a~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~v~I~V~DvNDn~P 312 (383)
...|.... +.|.++..++|..+ ..++++.+|+|.+..+..|
T Consensus 51 g~Vdt~k~----G~Y~VtY~VtDs~G-----------------------------n~~t~trtVtV~~~~e~~~ 91 (103)
T 2kpn_A 51 GEVDTTKA----GTYVLTYTVTDSKG-----------------------------HEVTAKQTVTVKVREEVKN 91 (103)
T ss_dssp SCCCSSSC----EEEEEEEEEECTTS-----------------------------CEEEEEEEEEEECSSCCCC
T ss_pred CcccCCCc----eEEEEEEEEEcCCC-----------------------------CEEEEEEEEEEeCCCcccC
Confidence 44555544 45999999999887 5677888888887655443
No 72
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=48.95 E-value=95 Score=24.33 Aligned_cols=46 Identities=22% Similarity=0.289 Sum_probs=24.3
Q ss_pred CCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC
Q psy11780 174 DQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS 222 (383)
Q Consensus 174 Dn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~ 222 (383)
|+.+.+.-..-...+.|+. |+.-.+|.-. .+....-.+.|+...+.
T Consensus 2 d~~~~i~F~~~~y~V~E~~--g~~~v~V~R~-g~~~~~v~V~y~t~~gT 47 (137)
T 3ead_A 2 DDPIRMYFEPGHYTVMENC--GEFEVRVVRR-GDISTYASVEYETQDGT 47 (137)
T ss_dssp ---CEEEESSCEEEEEGGG--CEEEEEEEEE-SCCSSCEEEEEEEECSS
T ss_pred CCCEEEEEcCCEEEEECCC--eEEEEEEEEE-CCCCceEEEEEEeECCC
Confidence 3455555455556788874 5554454333 24333457788876543
No 73
>2y72_A Collagenase, collagenase G; polycystic kidney disease domain, beta barrel, collagen RECO domain, hydrolase; 1.18A {Clostridium histolyticum} PDB: 3jqu_A 3js7_A
Probab=40.20 E-value=62 Score=22.95 Aligned_cols=31 Identities=16% Similarity=0.363 Sum_probs=23.8
Q ss_pred CCCCCcEEEEEEEEEeCCCCCCCCeeEEEEEEEEE
Q psy11780 136 DYENKFLYQLKILAVDRSNNDRRNTGTAAILVKVQ 170 (383)
Q Consensus 136 D~E~~~~~~l~V~a~D~~~~~~~~~~~~~v~I~V~ 170 (383)
-|...-.|.+++.++|..+ .+.+..+.|.|.
T Consensus 54 ty~~~G~Y~v~LtVtd~~G----~~~t~~~~V~V~ 84 (85)
T 2y72_A 54 AYKKAGTYNVTLKVTDDKG----ATATESFTIEIK 84 (85)
T ss_dssp ECSSCEEEEEEEEEEETTS----CEEEEEEEEEEE
T ss_pred EcCCCeEEEEEEEEEECCC----CEEEEEEEEEEc
Confidence 3667789999999999876 355677777775
No 74
>3ead_A Na/Ca exchange protein; CBD1, calcium regulation, membrane, transmembrane, membrane; 2.25A {Drosophila melanogaster} SCOP: b.1.27.0
Probab=35.97 E-value=1.5e+02 Score=23.04 Aligned_cols=25 Identities=28% Similarity=0.317 Sum_probs=3.6
Q ss_pred EEEEEEcCCCCCeEecCccEEEEcCC
Q psy11780 166 LVKVQDVEDQPPEFVAVSSVTRVSED 191 (383)
Q Consensus 166 ~I~V~DvNDn~P~f~~~~~~~~v~E~ 191 (383)
+|+|.|- |.+|.|.-..-...|.|+
T Consensus 108 tvtI~dd-D~~g~~~f~~~~~~V~E~ 132 (137)
T 3ead_A 108 TVMILDD-DHAGIFAFTDSVFEITES 132 (137)
T ss_dssp EEEEECC-C-----------------
T ss_pred EEEEECC-CCCCEEEECCCcEEEecc
Confidence 3444553 567776544444566776
No 75
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=29.76 E-value=1.8e+02 Score=29.55 Aligned_cols=56 Identities=11% Similarity=0.217 Sum_probs=32.6
Q ss_pred EEEEEeCCCCCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCC
Q psy11780 200 QVKAVDGDRGINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESK 264 (383)
Q Consensus 200 ~v~A~D~D~~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~ 264 (383)
.+.|.+-....+.+..|+|.+-+..|-.... ... ..|...+ ++.|.|.|+|++..+
T Consensus 712 ~fs~l~y~~~~~~~y~YrL~G~d~~W~~~~~-~~~------~~ytnL~--pG~Y~f~V~a~n~~g 767 (795)
T 4a2l_A 712 EFVVSNYISGQHNTFAYKLEGYDKEWYYLTD-SRT------VSYSNLP--QGTYQFLVKAANSDG 767 (795)
T ss_dssp EEEECCTTTTTCCEEEEEEETTCSSCEEESS-CCE------EEEECCC--SEEEEEEEEEECTTS
T ss_pred EEEEccCCCccccEEEEEEeCCCCCccCCCC-cCe------EEecccC--CCeEEEEEEEECCCC
Confidence 3444333334456778888865566665522 222 2232222 255999999999876
No 76
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=25.75 E-value=2.2e+02 Score=28.84 Aligned_cols=48 Identities=21% Similarity=0.245 Sum_probs=28.1
Q ss_pred CCCceEEEEEecCCcccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCCC
Q psy11780 209 GINNKILYSISSGSQGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEESK 264 (383)
Q Consensus 209 ~~n~~i~y~i~~~~~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~~ 264 (383)
+.+.+..|+|.+-+..|-.+......+ .|...+ ++.|.|.|+|++..+
T Consensus 686 ~~~~~y~Y~L~G~d~~W~~~~~~~~~~------~ytnL~--pG~Y~f~V~a~~~~g 733 (758)
T 3ott_A 686 DEKNKFVYRLEGMDKEWNFLKSNINRI------TYSNLS--YGNYQLIISKLERDG 733 (758)
T ss_dssp SSCCCEEEEEETTCSSCEECCTTCCEE------EECSCC--SEEEEEEEEEBCTTS
T ss_pred CccCeEEEEecCCCCCccCCCCCcceE------EecCCC--CccEEEEEEEeCCCC
Confidence 344567778876555665543222222 222222 256999999999876
No 77
>2y6h_A Xylanase, CBM4-2; hydrolase; 1.08A {Rhodothermus marinus} PDB: 2y64_A* 2y6g_A 2y6l_A* 2y6j_A* 2y6k_A* 3jxs_A 1k42_A 1k45_A
Probab=23.81 E-value=2.3e+02 Score=21.55 Aligned_cols=24 Identities=25% Similarity=0.479 Sum_probs=16.4
Q ss_pred CCCCeEEeCCCeeEEEEEecCCCCCCCeEEEEEE
Q psy11780 38 NRAPRFIIDEQTEIVIRLKEGPDTPAGTFIYRLR 71 (383)
Q Consensus 38 Dn~P~F~~~~~~~~~~~v~E~~~~~~g~~i~~v~ 71 (383)
-|||+|. +-|..++|-|..++.+.
T Consensus 37 tnppvfe----------v~e~~dap~g~kvlavt 60 (167)
T 2y6h_A 37 TNPPVFE----------VLETSDAPEGNKVLAVT 60 (167)
T ss_dssp SSCCEEE----------EEECTTCSSSSEEEEEE
T ss_pred cCCCeEE----------EEeccCCCCCceEEEEE
Confidence 7899995 23333678888777665
No 78
>1u2c_A Dystroglycan; IG-like domain, S6 like fold, protein binding; 2.30A {Mus musculus} SCOP: b.1.6.2 d.272.1.1
Probab=23.65 E-value=2.8e+02 Score=24.18 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=27.0
Q ss_pred cccEEEeCCCceEEEcccCCcccccCCCceEEEEEEEEeCC
Q psy11780 223 QGIFDIDPNTGNIFTLKELDRESATSNNGAYILEIKVTEES 263 (383)
Q Consensus 223 ~~~F~Id~~tG~i~~~~~lD~E~~~~~~~~y~l~V~a~D~~ 263 (383)
..|...|+.++.+ .--|++.... .|.+.|+|++.+
T Consensus 46 PsWL~fd~~t~Tf-sG~P~~~D~G-----~~~i~VtA~~~~ 80 (246)
T 1u2c_A 46 PSWLHWDPHSHIL-EGLPLDTDKG-----VHYISVSAARLG 80 (246)
T ss_dssp CTTEEEETTTTEE-EECCCGGGCE-----EEEEEEEEEEEC
T ss_pred CcceEEcCCCCeE-EeccCCCCcc-----eEEEEEEEeecc
Confidence 7899999998865 4456776664 399999999664
No 79
>3gin_A Sodium/calcium exchanger 1; CBD1, CBD2, NCX, calcium binding domain 1, antiport, calcium transport, calmodulin-binding, cell membrane; 2.40A {Canis lupus familiaris} PDB: 2dpk_A* 2fws_A
Probab=20.93 E-value=3.3e+02 Score=21.89 Aligned_cols=58 Identities=19% Similarity=0.182 Sum_probs=28.0
Q ss_pred EEEEEEEEEEcCCCCCeEecCccEEEEcCCCCCCcEEEEEEEEeCCCCCCceEEEEEecCC
Q psy11780 162 TAAILVKVQDVEDQPPEFVAVSSVTRVSEDVPVGTSVLQVKAVDGDRGINNKILYSISSGS 222 (383)
Q Consensus 162 ~~~v~I~V~DvNDn~P~f~~~~~~~~v~E~~~~gt~v~~v~A~D~D~~~n~~i~y~i~~~~ 222 (383)
++.+.+.|.|-+ ..+.|.-..-...|.|+. |+.-.+|.-+..+.+..-.+.|+...+.
T Consensus 9 ~~~~~~~i~ddd-~~g~i~F~~~~y~V~E~~--G~v~vtV~R~~G~~~~~v~V~y~T~dGT 66 (160)
T 3gin_A 9 SAALEVLFQGPG-PVSKIFFEQGTYQCLENC--GTVALTIIRRGGDLTNTVFVDFRTEDGT 66 (160)
T ss_dssp -------------CEEEEEESCSEEEEETTS--SEEEEEEEEESSCTTSCEEEEEEEEESS
T ss_pred cceEEEEEecCC-CccEEEEeCCEEEEEcCc--EEEEEEEEEccCCCCcEEEEEEEEECCc
Confidence 455677777753 566666665566889984 6655555444344333457889876543
Done!