BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy11781
(1228 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3Q6K|A Chain A, Salivary Protein From Lutzomyia Longipalpis
pdb|3Q6K|B Chain B, Salivary Protein From Lutzomyia Longipalpis
pdb|3Q6T|A Chain A, Salivary Protein From Lutzomyia Longipalpis, Ligand Free
pdb|3Q6T|B Chain B, Salivary Protein From Lutzomyia Longipalpis, Ligand Free
Length = 381
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 141/346 (40%), Gaps = 58/346 (16%)
Query: 421 IFLSFPKWKAGIPFTLASFNMNDP-----SESPILLPYPNWSYFDDSNCNSLISVFRMSV 475
+FL+ P+ +P+TLA + + SP+L + L S+++ +
Sbjct: 40 LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSG-----HKTGKELTSIYQPVI 94
Query: 476 DKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYILPTAQVFEGSLF 530
D C RLW++D G S + P P I+ +DLK + +Y PT V + + F
Sbjct: 95 DDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYF 154
Query: 531 SNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPE-PTQSTYILD 586
+V DC F Y+ + R L +YD K S+ +THP E PT+ Y
Sbjct: 155 GGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214
Query: 587 NLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRDDQRYMYFHSLS 646
+F+ GIFG+ + S + R Y+ + S
Sbjct: 215 EYEFK--AGIFGITLGDRDS----------------------------EGNRPAYYLAGS 244
Query: 647 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKH 705
+ + Y V+T +L+ +N LG+R + A A A + V+F+
Sbjct: 245 AIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297
Query: 706 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751
V CWNT+ + D+V TS + F D+ +D +W +SN
Sbjct: 298 QVSCWNTQKMPLRMKNTDVVYTSSRFV-FGTDISVDSKGGLWFMSN 342
Score = 99.8 bits (247), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 141/346 (40%), Gaps = 58/346 (16%)
Query: 871 IFLSFPKWKAGIPFTLASFNMNDP-----SESPILLPYPNWSYFDDSNCNSLISVFRMSV 925
+FL+ P+ +P+TLA + + SP+L + L S+++ +
Sbjct: 40 LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSG-----HKTGKELTSIYQPVI 94
Query: 926 DKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYILPTAQVFEGSLF 980
D C RLW++D G S + P P I+ +DLK + +Y PT V + + F
Sbjct: 95 DDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYF 154
Query: 981 SNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPE-PTQSTYILD 1036
+V DC F Y+ + R L +YD K S+ +THP E PT+ Y
Sbjct: 155 GGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214
Query: 1037 NLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRDDQRYMYFHSLS 1096
+F+ GIFG+ + S + R Y+ + S
Sbjct: 215 EYEFK--AGIFGITLGDRDS----------------------------EGNRPAYYLAGS 244
Query: 1097 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKH 1155
+ + Y V+T +L+ +N LG+R + A A A + V+F+
Sbjct: 245 AIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297
Query: 1156 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201
V CWNT+ + D+V TS + F D+ +D +W +SN
Sbjct: 298 QVSCWNTQKMPLRMKNTDVVYTSSRFV-FGTDISVDSKGGLWFMSN 342
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 122/297 (41%), Gaps = 48/297 (16%)
Query: 25 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYIL 79
L S+++ +D C RLW++D G S + P P I+ +DLK + +Y
Sbjct: 84 KELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYF 143
Query: 80 PTAQVFEGSLFSNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYP 136
PT V + + F +V DC F Y+ + R L +YD K S+ +THP
Sbjct: 144 PTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203
Query: 137 E-PTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRD 195
E PT+ Y +F+ GIFG+ + S +
Sbjct: 204 ERPTKFDYGGKEYEFK--AGIFGITLGDRDS----------------------------E 233
Query: 196 DQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SN 254
R Y+ + S+ + Y V+T +L+ +N LG+R + A A A +
Sbjct: 234 GNRPAYYLAGSAIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKT 286
Query: 255 GVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 311
V+F+ V CWNT+ + D+V TS + F D+ +D +W +SN
Sbjct: 287 KVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFV-FGTDISVDSKGGLWFMSN 342
>pdb|3Q6P|A Chain A, Salivary Protein From Lutzomyia Longipalpis.
Selenomethionine Derivative
pdb|3Q6P|B Chain B, Salivary Protein From Lutzomyia Longipalpis.
Selenomethionine Derivative
Length = 381
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 58/346 (16%)
Query: 421 IFLSFPKWKAGIPFTLASFNMNDP-----SESPILLPYPNWSYFDDSNCNSLISVFRMSV 475
+FL+ P+ +P+TLA + + SP+L + L S+++ +
Sbjct: 40 LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSG-----HKTGKELTSIYQPVI 94
Query: 476 DKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYILPTAQVFEGSLF 530
D C RLW++D G S + P P I+ +DLK + +Y PT V + + F
Sbjct: 95 DDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYF 154
Query: 531 SNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPE-PTQSTYILD 586
+V DC F Y+ + R L +YD K S+ +THP E PT+ Y
Sbjct: 155 GGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214
Query: 587 NLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRDDQRYMYFHSLS 646
+F+ GIFG+ + S + R Y+ + S
Sbjct: 215 EYEFK--AGIFGITLGDRDS----------------------------EGNRPAYYLAGS 244
Query: 647 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKH 705
+ + Y V+T +L+ +N LG+R + A A A + V+F+
Sbjct: 245 AIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297
Query: 706 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751
V CWNT+ + D+V TS + F D+ +D +W SN
Sbjct: 298 QVSCWNTQKXPLRXKNTDVVYTSSRFV-FGTDISVDSKGGLWFXSN 342
Score = 99.8 bits (247), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 140/346 (40%), Gaps = 58/346 (16%)
Query: 871 IFLSFPKWKAGIPFTLASFNMNDP-----SESPILLPYPNWSYFDDSNCNSLISVFRMSV 925
+FL+ P+ +P+TLA + + SP+L + L S+++ +
Sbjct: 40 LFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSPLLNKFSG-----HKTGKELTSIYQPVI 94
Query: 926 DKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYILPTAQVFEGSLF 980
D C RLW++D G S + P P I+ +DLK + +Y PT V + + F
Sbjct: 95 DDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYF 154
Query: 981 SNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPE-PTQSTYILD 1036
+V DC F Y+ + R L +YD K S+ +THP E PT+ Y
Sbjct: 155 GGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGK 214
Query: 1037 NLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRDDQRYMYFHSLS 1096
+F+ GIFG+ + S + R Y+ + S
Sbjct: 215 EYEFK--AGIFGITLGDRDS----------------------------EGNRPAYYLAGS 244
Query: 1097 SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKH 1155
+ + Y V+T +L+ +N LG+R + A A A + V+F+
Sbjct: 245 AIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297
Query: 1156 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201
V CWNT+ + D+V TS + F D+ +D +W SN
Sbjct: 298 QVSCWNTQKXPLRXKNTDVVYTSSRFV-FGTDISVDSKGGLWFXSN 342
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 121/297 (40%), Gaps = 48/297 (16%)
Query: 25 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCP---PKIMVFDLKTNTL--IRKYIL 79
L S+++ +D C RLW++D G S + P P I+ +DLK + +Y
Sbjct: 84 KELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYF 143
Query: 80 PTAQVFEGSLFSNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYP 136
PT V + + F +V DC F Y+ + R L +YD K S+ +THP
Sbjct: 144 PTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203
Query: 137 E-PTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRXXXXXXXXXXXXXNGTNVDKTIRD 195
E PT+ Y +F+ GIFG+ + S +
Sbjct: 204 ERPTKFDYGGKEYEFK--AGIFGITLGDRDS----------------------------E 233
Query: 196 DQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SN 254
R Y+ + S+ + Y V+T +L+ +N LG+R + A A A +
Sbjct: 234 GNRPAYYLAGSAIKVYSVNTKELKQKGGKLNP-------ELLGNRGKYNDAIALAYDPKT 286
Query: 255 GVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 311
V+F+ V CWNT+ + D+V TS + F D+ +D +W SN
Sbjct: 287 KVIFFAEANTKQVSCWNTQKXPLRXKNTDVVYTSSRFV-FGTDISVDSKGGLWFXSN 342
>pdb|2VOU|A Chain A, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
pdb|2VOU|B Chain B, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
pdb|2VOU|C Chain C, Structure Of 2,6-dihydroxypyridine-3-hydroxylase From
Arthrobacter Nicotinovorans
Length = 397
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 72 TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH 131
+++RK +L + G + V + E D V+ Y ND F YGL+ H
Sbjct: 153 SVVRKRLLGIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLL----------DDGH 202
Query: 132 PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPEL 165
YP P + L F+W + +A P+L
Sbjct: 203 LIAYPIPGRENAESPRLNFQWY---WNVAEGPDL 233
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 512 TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH 571
+++RK +L + G + V + E D V+ Y ND F YGL+ H
Sbjct: 153 SVVRKRLLGIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLL----------DDGH 202
Query: 572 PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPEL 605
YP P + L F+W + +A P+L
Sbjct: 203 LIAYPIPGRENAESPRLNFQWY---WNVAEGPDL 233
Score = 30.4 bits (67), Expect = 6.7, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 39/94 (41%), Gaps = 13/94 (13%)
Query: 962 TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH 1021
+++RK +L + G + V + E D V+ Y ND F YGL+ H
Sbjct: 153 SVVRKRLLGIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLL----------DDGH 202
Query: 1022 PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPEL 1055
YP P + L F+W + +A P+L
Sbjct: 203 LIAYPIPGRENAESPRLNFQWY---WNVAEGPDL 233
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,300,196
Number of Sequences: 62578
Number of extensions: 1533618
Number of successful extensions: 3407
Number of sequences better than 100.0: 5
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 3380
Number of HSP's gapped (non-prelim): 21
length of query: 1228
length of database: 14,973,337
effective HSP length: 110
effective length of query: 1118
effective length of database: 8,089,757
effective search space: 9044348326
effective search space used: 9044348326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)