Query psy11781
Match_columns 1228
No_of_seqs 429 out of 1106
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 18:49:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11781.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/11781hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3q6k_A 43.2 kDa salivary prote 100.0 3.1E-87 1E-91 775.9 37.7 359 376-786 2-379 (381)
2 3q6k_A 43.2 kDa salivary prote 100.0 2.4E-86 8.3E-91 768.4 35.4 350 826-1227 2-370 (381)
3 2qe8_A Uncharacterized protein 100.0 9E-39 3.1E-43 363.5 31.9 307 859-1226 17-336 (343)
4 2qe8_A Uncharacterized protein 100.0 1.9E-38 6.6E-43 360.8 32.4 300 409-776 17-336 (343)
5 3s94_A LRP-6, low-density lipo 99.5 3.8E-10 1.3E-14 139.4 51.2 482 465-1205 37-543 (619)
6 4a0p_A LRP6, LRP-6, low-densit 99.5 6.4E-10 2.2E-14 137.6 48.5 427 532-1205 41-500 (628)
7 4a0p_A LRP6, LRP-6, low-densit 99.5 1.6E-09 5.4E-14 134.1 51.2 487 466-1205 35-541 (628)
8 3s94_A LRP-6, low-density lipo 99.4 2.6E-09 8.9E-14 131.9 49.7 169 962-1205 326-502 (619)
9 2qc5_A Streptogramin B lactona 99.3 6E-09 2.1E-13 112.5 34.4 189 466-751 18-206 (300)
10 2p9w_A MAL S 1 allergenic prot 99.3 8.7E-10 3E-14 125.7 27.5 283 856-1224 10-322 (334)
11 2p9w_A MAL S 1 allergenic prot 99.2 1.3E-09 4.4E-14 124.3 27.0 283 406-774 10-322 (334)
12 2p4o_A Hypothetical protein; p 99.2 1.3E-08 4.5E-13 113.4 30.8 261 409-776 32-299 (306)
13 2p4o_A Hypothetical protein; p 99.2 1.7E-08 5.8E-13 112.5 31.0 260 859-1226 32-299 (306)
14 2z2n_A Virginiamycin B lyase; 99.1 1.9E-07 6.7E-12 100.6 34.2 188 467-751 14-201 (299)
15 4hw6_A Hypothetical protein, I 99.1 5.1E-09 1.7E-13 123.9 21.4 246 410-751 140-421 (433)
16 2fp8_A Strictosidine synthase; 99.0 7.5E-09 2.6E-13 115.8 18.1 239 409-750 19-300 (322)
17 4hw6_A Hypothetical protein, I 99.0 2.7E-08 9.3E-13 117.6 23.4 240 860-1201 140-421 (433)
18 1q7f_A NHL, brain tumor CG1071 99.0 2.4E-08 8.4E-13 108.4 21.1 198 465-751 27-225 (286)
19 1q7f_A NHL, brain tumor CG1071 98.9 5E-08 1.7E-12 105.9 22.0 197 915-1201 27-225 (286)
20 2qc5_A Streptogramin B lactona 98.9 1.6E-07 5.6E-12 101.2 24.6 226 916-1200 18-247 (300)
21 2fp8_A Strictosidine synthase; 98.9 3E-08 1E-12 110.8 18.8 193 917-1201 79-301 (322)
22 3fvz_A Peptidyl-glycine alpha- 98.9 5.8E-08 2E-12 109.0 20.2 182 465-713 21-226 (329)
23 3tc9_A Hypothetical hydrolase; 98.8 1.4E-07 4.9E-12 111.3 22.5 247 409-751 137-418 (430)
24 3dsm_A Uncharacterized protein 98.8 5.8E-07 2E-11 101.2 26.5 230 858-1200 43-285 (328)
25 3hrp_A Uncharacterized protein 98.8 2.1E-07 7.3E-12 108.8 23.6 198 466-751 129-341 (409)
26 3hrp_A Uncharacterized protein 98.8 2.5E-07 8.6E-12 108.2 24.0 197 916-1201 129-341 (409)
27 3fvz_A Peptidyl-glycine alpha- 98.8 2E-07 7E-12 104.6 21.9 211 915-1201 88-310 (329)
28 3e5z_A Putative gluconolactona 98.8 4.4E-07 1.5E-11 99.4 22.6 230 408-752 27-277 (296)
29 1ijq_A LDL receptor, low-densi 98.8 4.3E-07 1.5E-11 102.3 22.9 192 467-751 29-226 (316)
30 3v64_C Agrin; beta propeller, 98.8 4.6E-07 1.6E-11 103.8 23.3 192 466-753 71-265 (349)
31 1rwi_B Serine/threonine-protei 98.8 1.7E-07 5.9E-12 100.2 18.5 185 469-751 25-210 (270)
32 3tc9_A Hypothetical hydrolase; 98.8 3.6E-07 1.2E-11 107.8 22.6 239 860-1200 138-417 (430)
33 3dsm_A Uncharacterized protein 98.8 1.2E-06 4.2E-11 98.6 25.7 229 409-750 44-285 (328)
34 3v65_B Low-density lipoprotein 98.8 4.2E-07 1.4E-11 105.5 22.4 190 466-751 114-306 (386)
35 1rwi_B Serine/threonine-protei 98.7 2.9E-07 9.8E-12 98.5 19.1 185 919-1201 25-210 (270)
36 3v9f_A Two-component system se 98.7 0.00088 3E-08 84.1 53.7 190 918-1201 450-646 (781)
37 4a2l_A BT_4663, two-component 98.7 0.0013 4.6E-08 82.6 55.3 258 233-572 30-300 (795)
38 3g4e_A Regucalcin; six bladed 98.7 4.8E-07 1.6E-11 100.1 20.2 247 408-753 12-263 (297)
39 3vgz_A Uncharacterized protein 98.7 5.9E-05 2E-09 83.1 36.9 83 469-568 42-125 (353)
40 1ijq_A LDL receptor, low-densi 98.7 1.5E-06 5E-11 97.9 24.2 193 917-1202 29-227 (316)
41 3dr2_A Exported gluconolactona 98.7 5E-07 1.7E-11 100.1 19.6 188 469-752 87-297 (305)
42 3v64_C Agrin; beta propeller, 98.7 1.3E-06 4.4E-11 100.0 23.4 193 916-1204 71-266 (349)
43 1npe_A Nidogen, entactin; glyc 98.7 1.5E-06 5.1E-11 94.3 22.6 188 467-751 35-226 (267)
44 3e5z_A Putative gluconolactona 98.7 1.7E-06 5.7E-11 94.7 23.0 230 858-1202 27-277 (296)
45 2z2n_A Virginiamycin B lyase; 98.7 3E-06 1E-10 91.2 24.7 225 917-1200 14-242 (299)
46 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 3.7E-07 1.3E-11 99.7 17.5 249 410-752 19-288 (314)
47 2dg1_A DRP35, lactonase; beta 98.7 2.3E-06 7.9E-11 94.7 23.9 258 409-775 45-314 (333)
48 3v65_B Low-density lipoprotein 98.7 1.3E-06 4.4E-11 101.4 22.6 191 916-1202 114-307 (386)
49 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 1E-06 3.5E-11 96.2 19.6 248 860-1202 19-288 (314)
50 3g4e_A Regucalcin; six bladed 98.6 8.4E-07 2.9E-11 98.1 18.7 237 858-1203 12-263 (297)
51 1npe_A Nidogen, entactin; glyc 98.6 4.5E-06 1.5E-10 90.5 23.9 188 917-1201 35-226 (267)
52 4a2l_A BT_4663, two-component 98.6 0.00056 1.9E-08 86.1 46.1 234 919-1201 358-604 (795)
53 3p5b_L Low density lipoprotein 98.6 2.8E-06 9.6E-11 99.2 23.0 194 466-751 110-308 (400)
54 2dg1_A DRP35, lactonase; beta 98.6 6.5E-06 2.2E-10 91.1 24.5 244 860-1203 46-301 (333)
55 3sov_A LRP-6, low-density lipo 98.6 3.6E-06 1.2E-10 95.4 22.3 191 466-751 33-226 (318)
56 3v9f_A Two-component system se 98.5 0.00048 1.7E-08 86.5 42.7 190 918-1201 407-601 (781)
57 3dr2_A Exported gluconolactona 98.5 3.1E-06 1E-10 93.8 20.0 187 920-1202 88-297 (305)
58 3m0c_C LDL receptor, low-densi 98.5 3.4E-06 1.2E-10 107.0 22.4 197 466-754 422-623 (791)
59 2ghs_A AGR_C_1268P; regucalcin 98.5 5.5E-06 1.9E-10 93.1 21.4 235 408-753 48-293 (326)
60 3p5b_L Low density lipoprotein 98.5 6E-06 2.1E-10 96.4 22.4 195 916-1202 110-309 (400)
61 3kya_A Putative phosphatase; s 98.5 5.6E-06 1.9E-10 99.6 22.4 222 913-1201 134-398 (496)
62 3sov_A LRP-6, low-density lipo 98.5 6.9E-06 2.4E-10 93.1 22.0 192 916-1202 33-227 (318)
63 3kya_A Putative phosphatase; s 98.5 6.3E-06 2.2E-10 99.1 21.7 222 463-751 134-398 (496)
64 3qqz_A Putative uncharacterize 98.5 1E-05 3.4E-10 89.5 21.4 211 468-756 27-249 (255)
65 1n7d_A LDL receptor, low-densi 98.4 1.3E-06 4.5E-11 109.3 15.5 192 467-752 405-603 (699)
66 3m0c_C LDL receptor, low-densi 98.4 9.9E-06 3.4E-10 102.7 23.4 198 916-1205 422-624 (791)
67 2ghs_A AGR_C_1268P; regucalcin 98.4 1.6E-05 5.4E-10 89.4 22.5 234 859-1203 49-293 (326)
68 2iwa_A Glutamine cyclotransfer 98.4 3.3E-05 1.1E-09 85.9 23.3 195 920-1205 23-229 (266)
69 3vgz_A Uncharacterized protein 98.4 8.3E-05 2.8E-09 81.9 26.4 281 860-1202 42-334 (353)
70 3sre_A PON1, serum paraoxonase 98.4 8.6E-06 2.9E-10 94.1 18.8 261 410-750 51-345 (355)
71 3qqz_A Putative uncharacterize 98.3 1.8E-05 6.1E-10 87.5 19.9 205 918-1200 27-241 (255)
72 1n7d_A LDL receptor, low-densi 98.3 2.7E-06 9.3E-11 106.5 14.4 193 917-1203 405-604 (699)
73 2iwa_A Glutamine cyclotransfer 98.3 4.2E-05 1.4E-09 85.0 21.6 196 469-755 22-229 (266)
74 3sre_A PON1, serum paraoxonase 98.2 4.3E-05 1.5E-09 88.3 20.4 259 860-1200 51-345 (355)
75 3nol_A Glutamine cyclotransfer 98.2 0.00011 3.7E-09 81.5 21.3 196 919-1207 44-250 (262)
76 3nol_A Glutamine cyclotransfer 98.1 0.00018 6.1E-09 79.7 21.2 195 469-756 44-249 (262)
77 3mbr_X Glutamine cyclotransfer 98.1 0.00033 1.1E-08 76.8 23.1 196 919-1207 22-229 (243)
78 1l0q_A Surface layer protein; 98.1 0.015 5E-07 65.2 37.1 163 501-750 12-176 (391)
79 3mbr_X Glutamine cyclotransfer 98.0 0.00043 1.5E-08 75.9 22.5 194 469-755 22-227 (243)
80 3u4y_A Uncharacterized protein 98.0 0.00049 1.7E-08 75.4 22.2 220 927-1200 8-239 (331)
81 3nok_A Glutaminyl cyclase; bet 97.9 0.00028 9.5E-09 78.3 18.6 191 920-1206 57-259 (268)
82 3sjl_D Methylamine dehydrogena 97.9 0.0014 4.9E-08 76.5 25.4 93 854-972 277-375 (386)
83 3u4y_A Uncharacterized protein 97.8 0.0022 7.5E-08 70.2 24.1 221 418-750 9-239 (331)
84 3nok_A Glutaminyl cyclase; bet 97.8 0.00061 2.1E-08 75.6 18.5 191 470-756 57-259 (268)
85 3hfq_A Uncharacterized protein 97.7 0.0021 7.2E-08 71.3 21.8 251 408-750 39-304 (347)
86 2ism_A Putative oxidoreductase 97.7 0.0021 7.2E-08 73.5 22.1 250 465-752 28-334 (352)
87 3hfq_A Uncharacterized protein 97.7 0.0035 1.2E-07 69.4 23.1 250 858-1201 39-305 (347)
88 2ism_A Putative oxidoreductase 97.7 0.0029 9.8E-08 72.4 22.5 258 915-1203 28-335 (352)
89 3ott_A Two-component system se 97.7 0.056 1.9E-06 67.5 36.1 80 469-569 147-226 (758)
90 3c75_H MADH, methylamine dehyd 97.5 0.0018 6.1E-08 76.6 18.7 284 867-1204 83-392 (426)
91 2g8s_A Glucose/sorbosone dehyd 97.5 0.023 7.8E-07 65.0 26.5 135 631-776 23-172 (353)
92 3a9g_A Putative uncharacterize 97.5 0.018 6.3E-07 65.9 25.6 252 915-1201 26-330 (354)
93 3no2_A Uncharacterized protein 97.5 0.0039 1.3E-07 68.7 18.8 190 469-751 38-231 (276)
94 1jmx_B Amine dehydrogenase; ox 97.4 0.0059 2E-07 66.7 20.1 74 474-568 6-79 (349)
95 1ri6_A Putative isomerase YBHE 97.4 0.012 4.1E-07 63.9 21.9 201 469-750 39-249 (343)
96 3bws_A Protein LP49; two-domai 97.4 0.019 6.7E-07 65.1 24.5 225 918-1200 170-418 (433)
97 3no2_A Uncharacterized protein 97.4 0.0072 2.5E-07 66.5 20.0 189 920-1201 39-231 (276)
98 3ott_A Two-component system se 97.4 0.33 1.1E-05 60.5 37.5 257 412-776 376-644 (758)
99 1ri6_A Putative isomerase YBHE 97.4 0.021 7.1E-07 62.0 23.3 244 919-1200 39-295 (343)
100 1l0q_A Surface layer protein; 97.4 0.014 4.6E-07 65.5 22.2 182 920-1200 34-218 (391)
101 3das_A Putative oxidoreductase 97.3 0.045 1.5E-06 63.0 26.5 168 530-753 34-222 (347)
102 3c75_H MADH, methylamine dehyd 97.3 0.0037 1.3E-07 73.9 17.9 284 417-753 83-391 (426)
103 3a9g_A Putative uncharacterize 97.3 0.014 4.9E-07 66.8 22.1 83 465-564 26-115 (354)
104 3bws_A Protein LP49; two-domai 97.3 0.028 9.7E-07 63.8 24.0 269 411-750 125-418 (433)
105 3scy_A Hypothetical bacterial 97.3 0.015 5.2E-07 64.8 21.3 166 919-1165 156-340 (361)
106 1jmx_B Amine dehydrogenase; ox 97.3 0.0091 3.1E-07 65.2 19.0 74 924-1018 6-79 (349)
107 2ece_A 462AA long hypothetical 97.3 0.019 6.5E-07 68.2 22.6 242 466-775 136-423 (462)
108 2ece_A 462AA long hypothetical 97.2 0.02 6.9E-07 68.0 22.2 220 916-1201 136-400 (462)
109 3scy_A Hypothetical bacterial 97.1 0.0084 2.9E-07 66.9 17.3 165 468-713 155-338 (361)
110 1pby_B Quinohemoprotein amine 97.1 0.039 1.3E-06 59.7 21.3 84 920-1020 36-131 (337)
111 3hxj_A Pyrrolo-quinoline quino 97.0 0.026 8.8E-07 61.6 18.9 174 472-752 141-314 (330)
112 2oiz_A Aromatic amine dehydrog 96.9 0.033 1.1E-06 63.4 20.1 91 922-1019 54-146 (361)
113 3hxj_A Pyrrolo-quinoline quino 96.9 0.039 1.3E-06 60.2 19.8 174 922-1202 141-314 (330)
114 1pby_B Quinohemoprotein amine 96.8 0.053 1.8E-06 58.6 19.7 84 470-570 36-131 (337)
115 1nir_A Nitrite reductase; hemo 96.8 0.076 2.6E-06 64.2 22.9 173 920-1166 181-357 (543)
116 2mad_H Methylamine dehydrogena 96.6 0.3 1E-05 56.1 24.8 90 922-1019 70-162 (373)
117 1cru_A Protein (soluble quinop 96.6 0.025 8.5E-07 67.2 15.7 165 982-1202 31-247 (454)
118 1nir_A Nitrite reductase; hemo 96.6 0.14 4.8E-06 61.9 22.6 185 925-1201 145-343 (543)
119 1cru_A Protein (soluble quinop 96.5 0.029 9.8E-07 66.7 16.2 167 530-752 29-247 (454)
120 2oiz_A Aromatic amine dehydrog 96.5 0.069 2.4E-06 60.7 18.7 91 472-569 54-146 (361)
121 3sjl_D Methylamine dehydrogena 96.5 0.1 3.5E-06 60.8 20.0 128 418-569 44-175 (386)
122 3sfz_A APAF-1, apoptotic pepti 96.5 1.7 5.8E-05 56.7 33.8 228 469-750 659-900 (1249)
123 3das_A Putative oxidoreductase 96.4 0.088 3E-06 60.5 18.7 160 993-1203 42-222 (347)
124 2g8s_A Glucose/sorbosone dehyd 96.4 0.023 7.8E-07 65.0 13.3 72 466-552 16-89 (353)
125 2mad_H Methylamine dehydrogena 96.3 0.29 1E-05 56.2 22.7 90 472-569 70-162 (373)
126 1fwx_A Nitrous oxide reductase 96.2 0.072 2.4E-06 65.3 16.8 205 952-1205 176-410 (595)
127 1fwx_A Nitrous oxide reductase 96.1 0.019 6.4E-07 70.3 11.2 223 501-773 175-429 (595)
128 1qks_A Cytochrome CD1 nitrite 96.1 0.75 2.6E-05 56.1 25.3 211 952-1189 321-557 (567)
129 3amr_A 3-phytase; beta-propell 95.9 0.28 9.6E-06 56.5 19.2 63 684-750 180-250 (355)
130 1jof_A Carboxy-CIS,CIS-muconat 95.7 0.2 6.9E-06 56.3 17.1 106 632-750 151-273 (365)
131 1qks_A Cytochrome CD1 nitrite 95.7 0.45 1.5E-05 58.0 21.0 192 925-1204 163-364 (567)
132 3amr_A 3-phytase; beta-propell 95.2 1.3 4.6E-05 50.9 21.6 63 1134-1200 180-250 (355)
133 1jof_A Carboxy-CIS,CIS-muconat 94.2 1.6 5.5E-05 48.9 18.9 77 469-565 146-228 (365)
134 1mda_H Methylamine dehydrogena 93.9 0.18 6.3E-06 58.2 10.6 70 929-1018 32-110 (368)
135 3zwl_B Eukaryotic translation 93.8 4.5 0.00015 43.7 21.1 197 468-750 33-236 (369)
136 1mda_H Methylamine dehydrogena 93.8 0.18 6E-06 58.4 10.0 70 479-568 32-110 (368)
137 3zwl_B Eukaryotic translation 93.7 5.4 0.00019 43.0 21.4 79 918-1019 33-111 (369)
138 1gxr_A ESG1, transducin-like e 92.6 8.5 0.00029 40.9 20.6 161 952-1200 164-324 (337)
139 2ojh_A Uncharacterized protein 92.4 5.9 0.0002 41.0 18.6 81 920-1021 44-127 (297)
140 1gxr_A ESG1, transducin-like e 92.1 14 0.00048 39.2 22.5 159 503-749 165-323 (337)
141 2vdu_B TRNA (guanine-N(7)-)-me 91.7 5.1 0.00017 46.0 18.6 96 636-750 160-258 (450)
142 4h5i_A Guanine nucleotide-exch 91.1 15 0.00051 41.1 21.3 73 922-1017 138-210 (365)
143 2hqs_A Protein TOLB; TOLB, PAL 91.0 10 0.00034 43.5 20.1 158 501-746 203-367 (415)
144 2ojh_A Uncharacterized protein 90.5 14 0.00049 38.0 19.1 58 500-570 21-79 (297)
145 4h5i_A Guanine nucleotide-exch 90.4 16 0.00053 41.0 20.6 57 686-749 272-329 (365)
146 2vdu_B TRNA (guanine-N(7)-)-me 90.3 5.7 0.00019 45.6 17.2 71 1081-1163 155-228 (450)
147 3q7m_A Lipoprotein YFGL, BAMB; 90.1 26 0.00091 38.8 37.0 67 62-131 64-131 (376)
148 2hqs_A Protein TOLB; TOLB, PAL 90.0 24 0.0008 40.4 22.0 59 951-1019 203-262 (415)
149 1k8k_C P40, ARP2/3 complex 41 89.9 10 0.00034 41.2 18.1 202 469-748 54-260 (372)
150 3pe7_A Oligogalacturonate lyas 89.3 11 0.00039 41.5 18.1 60 502-570 169-232 (388)
151 1k8k_C P40, ARP2/3 complex 41 88.9 16 0.00054 39.6 18.7 80 919-1019 54-133 (372)
152 3o4h_A Acylamino-acid-releasin 88.5 7.2 0.00025 46.4 16.8 116 10-129 19-147 (582)
153 3sfz_A APAF-1, apoptotic pepti 87.8 24 0.00084 45.9 22.4 226 919-1199 659-899 (1249)
154 2ecf_A Dipeptidyl peptidase IV 87.4 21 0.00072 43.5 20.4 88 919-1020 38-148 (741)
155 3q7m_A Lipoprotein YFGL, BAMB; 86.9 42 0.0014 37.1 23.1 69 927-1021 102-171 (376)
156 3pe7_A Oligogalacturonate lyas 86.5 14 0.00048 40.7 16.6 58 952-1019 169-231 (388)
157 1r5m_A SIR4-interacting protei 85.7 31 0.0011 37.7 19.0 77 920-1015 152-238 (425)
158 2z3z_A Dipeptidyl aminopeptida 85.5 23 0.00078 42.9 19.2 25 993-1020 93-117 (706)
159 1erj_A Transcriptional repress 85.0 54 0.0018 36.7 21.2 79 469-570 167-245 (393)
160 1r5m_A SIR4-interacting protei 84.5 33 0.0011 37.6 18.3 57 686-750 292-348 (425)
161 2ecf_A Dipeptidyl peptidase IV 84.0 23 0.00079 43.1 18.3 87 29-129 38-147 (741)
162 3s25_A Hypothetical 7-bladed b 83.6 26 0.0009 38.9 17.0 133 993-1163 156-292 (302)
163 3ow8_A WD repeat-containing pr 83.0 57 0.002 35.5 21.0 58 502-570 145-202 (321)
164 4aez_A CDC20, WD repeat-contai 82.9 60 0.002 36.2 20.0 156 469-713 219-379 (401)
165 3dw8_B Serine/threonine-protei 82.4 39 0.0013 37.7 18.1 80 920-1016 180-261 (447)
166 2z3z_A Dipeptidyl aminopeptida 82.1 35 0.0012 41.3 18.8 56 61-129 101-161 (706)
167 2ad6_A Methanol dehydrogenase 81.6 1E+02 0.0034 37.2 23.3 66 502-570 273-343 (571)
168 1got_B GT-beta; complex (GTP-b 81.6 52 0.0018 35.9 18.4 56 1136-1198 273-328 (340)
169 1got_B GT-beta; complex (GTP-b 81.5 65 0.0022 35.1 20.2 56 502-568 165-220 (340)
170 1kv9_A Type II quinohemoprotei 81.2 92 0.0031 38.3 22.2 66 501-570 270-341 (668)
171 1tl2_A L10, protein (tachylect 80.8 2.2 7.7E-05 46.2 6.5 106 1081-1202 46-154 (236)
172 3s25_A Hypothetical 7-bladed b 80.5 32 0.0011 38.2 16.2 133 543-713 156-292 (302)
173 1kv9_A Type II quinohemoprotei 80.1 1.2E+02 0.0041 37.2 23.9 65 951-1019 270-340 (668)
174 3vl1_A 26S proteasome regulato 79.8 46 0.0016 36.8 17.4 179 469-713 141-321 (420)
175 1k32_A Tricorn protease; prote 79.1 1E+02 0.0034 39.7 22.5 60 502-570 401-468 (1045)
176 3c5m_A Oligogalacturonate lyas 78.6 72 0.0025 34.7 18.3 59 952-1019 169-231 (396)
177 3c5m_A Oligogalacturonate lyas 78.4 81 0.0028 34.3 18.7 60 502-570 169-232 (396)
178 1erj_A Transcriptional repress 78.0 92 0.0032 34.7 21.7 77 920-1019 168-244 (393)
179 4aez_A CDC20, WD repeat-contai 78.0 92 0.0031 34.7 19.8 79 919-1019 219-299 (401)
180 1k32_A Tricorn protease; prote 76.6 1.3E+02 0.0043 38.8 22.4 80 920-1020 381-468 (1045)
181 3ow8_A WD repeat-containing pr 76.2 92 0.0032 33.8 24.5 193 952-1199 103-307 (321)
182 1tl2_A L10, protein (tachylect 76.1 8.1 0.00028 41.9 9.1 114 197-323 43-162 (236)
183 3dwl_C Actin-related protein 2 76.0 21 0.00073 39.0 13.1 63 685-750 207-269 (377)
184 3lrv_A PRE-mRNA-splicing facto 76.0 68 0.0023 34.9 17.1 61 502-570 105-165 (343)
185 4gqb_B Methylosome protein 50; 74.4 76 0.0026 35.2 17.2 81 470-570 85-165 (344)
186 4aow_A Guanine nucleotide-bind 74.4 43 0.0015 35.6 14.6 58 502-570 196-253 (340)
187 2aq5_A Coronin-1A; WD40 repeat 74.3 1.1E+02 0.0038 33.8 21.3 60 686-750 223-285 (402)
188 4gqb_B Methylosome protein 50; 74.2 71 0.0024 35.4 16.9 81 920-1020 85-165 (344)
189 2pm9_A Protein WEB1, protein t 72.5 70 0.0024 35.1 16.2 58 686-750 265-324 (416)
190 1nr0_A Actin interacting prote 71.7 1.7E+02 0.0059 34.9 20.7 222 920-1202 242-556 (611)
191 3frx_A Guanine nucleotide-bind 71.6 28 0.00094 37.8 12.4 140 502-713 177-316 (319)
192 4a11_B DNA excision repair pro 71.5 1.2E+02 0.004 32.9 22.2 56 502-566 123-178 (408)
193 2pbi_B Guanine nucleotide-bind 71.1 1.3E+02 0.0044 33.1 21.1 55 687-748 288-342 (354)
194 3mkq_A Coatomer beta'-subunit; 70.7 99 0.0034 37.7 18.5 78 469-569 15-92 (814)
195 1sq9_A Antiviral protein SKI8; 70.3 1.1E+02 0.0039 33.2 17.2 29 1135-1163 293-321 (397)
196 4aow_A Guanine nucleotide-bind 70.0 35 0.0012 36.3 12.7 57 952-1019 196-252 (340)
197 2xdw_A Prolyl endopeptidase; a 69.9 1.8E+02 0.0062 35.4 20.5 28 542-569 136-166 (710)
198 3dwl_C Actin-related protein 2 69.2 19 0.00066 39.3 10.6 30 1135-1164 207-236 (377)
199 3vu4_A KMHSV2; beta-propeller 69.1 49 0.0017 36.6 14.0 28 686-713 243-270 (355)
200 2aq5_A Coronin-1A; WD40 repeat 68.4 1.5E+02 0.0051 32.8 22.1 28 1136-1163 223-253 (402)
201 2xdw_A Prolyl endopeptidase; a 67.7 2.2E+02 0.0076 34.6 22.3 28 992-1019 136-166 (710)
202 1z68_A Fibroblast activation p 67.1 68 0.0023 38.9 15.8 77 62-144 37-127 (719)
203 3k26_A Polycomb protein EED; W 66.8 88 0.003 33.3 15.1 59 952-1018 139-197 (366)
204 4a11_B DNA excision repair pro 66.5 1.5E+02 0.0051 32.1 21.3 56 952-1016 123-178 (408)
205 4g56_B MGC81050 protein; prote 66.4 1.5E+02 0.0051 32.7 17.3 76 469-566 141-216 (357)
206 3frx_A Guanine nucleotide-bind 65.8 48 0.0017 35.9 12.8 140 952-1163 177-316 (319)
207 1yiq_A Quinohemoprotein alcoho 65.5 23 0.00077 44.0 11.2 76 952-1041 456-533 (689)
208 3dw8_B Serine/threonine-protei 65.2 1.7E+02 0.0059 32.3 18.3 80 470-566 180-261 (447)
209 3vl1_A 26S proteasome regulato 64.9 1.7E+02 0.0057 32.2 21.2 159 952-1164 162-322 (420)
210 4g56_B MGC81050 protein; prote 64.7 1.6E+02 0.0054 32.5 17.0 75 920-1016 142-216 (357)
211 1pgu_A Actin interacting prote 64.7 1.1E+02 0.0036 35.7 16.3 73 470-564 21-98 (615)
212 3vu4_A KMHSV2; beta-propeller 64.6 70 0.0024 35.3 14.1 65 1081-1163 201-270 (355)
213 4ery_A WD repeat-containing pr 64.6 1.5E+02 0.005 31.4 24.7 79 919-1020 67-145 (312)
214 2xyi_A Probable histone-bindin 64.6 91 0.0031 35.3 15.4 74 469-564 233-310 (430)
215 3o4h_A Acylamino-acid-releasin 64.4 62 0.0021 38.2 14.4 76 470-570 114-191 (582)
216 3azo_A Aminopeptidase; POP fam 64.4 58 0.002 39.0 14.3 72 1081-1163 193-273 (662)
217 2pm9_A Protein WEB1, protein t 64.4 1.7E+02 0.0057 32.0 17.3 58 1136-1200 265-324 (416)
218 1xfd_A DIP, dipeptidyl aminope 63.9 41 0.0014 40.6 13.0 65 62-129 229-295 (723)
219 2wg3_C Hedgehog-interacting pr 62.3 37 0.0013 40.2 11.7 60 686-749 141-238 (463)
220 1pgu_A Actin interacting prote 61.4 1.4E+02 0.0047 34.7 16.4 73 920-1014 21-98 (615)
221 2xyi_A Probable histone-bindin 61.3 81 0.0028 35.7 14.2 73 920-1014 234-310 (430)
222 2pbi_B Guanine nucleotide-bind 61.0 1.9E+02 0.0067 31.6 23.0 56 1137-1199 288-343 (354)
223 3mkq_A Coatomer beta'-subunit; 60.7 2.9E+02 0.0099 33.5 24.5 78 920-1020 16-93 (814)
224 4ery_A WD repeat-containing pr 59.6 1.8E+02 0.0061 30.7 22.4 56 502-568 130-185 (312)
225 4a9v_A PHOX; hydrolase, beta-p 58.2 14 0.00048 45.2 7.1 60 684-749 476-548 (592)
226 3azo_A Aminopeptidase; POP fam 58.0 2.1E+02 0.0071 34.1 17.6 62 686-752 244-313 (662)
227 1kb0_A Quinohemoprotein alcoho 58.0 37 0.0013 41.9 11.2 77 951-1041 457-535 (677)
228 2gop_A Trilobed protease; beta 57.9 1.1E+02 0.0037 32.8 13.9 37 528-569 15-58 (347)
229 3i2n_A WD repeat-containing pr 57.2 71 0.0024 34.0 12.1 29 1135-1163 261-290 (357)
230 4a5s_A Dipeptidyl peptidase 4 57.1 56 0.0019 40.2 12.7 142 62-216 229-399 (740)
231 3v7d_B Cell division control p 57.1 2.5E+02 0.0084 31.5 17.6 57 952-1020 143-199 (464)
232 2wg3_C Hedgehog-interacting pr 56.7 49 0.0017 39.1 11.5 60 1136-1199 141-238 (463)
233 3ei3_B DNA damage-binding prot 56.6 2.2E+02 0.0076 30.9 22.8 60 952-1019 97-156 (383)
234 3i2n_A WD repeat-containing pr 56.0 2.1E+02 0.007 30.3 17.5 29 685-713 261-290 (357)
235 1flg_A Protein (quinoprotein e 51.8 47 0.0016 40.3 10.5 80 952-1045 467-549 (582)
236 1xfd_A DIP, dipeptidyl aminope 51.8 85 0.0029 37.9 12.8 65 952-1020 229-296 (723)
237 3k26_A Polycomb protein EED; W 51.5 2.4E+02 0.0083 29.8 19.4 59 502-570 96-154 (366)
238 2ynn_A Coatomer subunit beta'; 51.3 2.5E+02 0.0084 29.8 20.0 78 469-569 15-92 (304)
239 3hx6_A Type 4 fimbrial biogene 47.6 35 0.0012 41.5 8.2 64 949-1014 221-285 (570)
240 4a9v_A PHOX; hydrolase, beta-p 47.5 49 0.0017 40.5 9.5 75 465-549 473-548 (592)
241 2bkl_A Prolyl endopeptidase; m 47.3 4.5E+02 0.016 31.7 20.0 25 992-1016 132-159 (695)
242 3mmy_A MRNA export factor; mRN 47.3 2.8E+02 0.0095 29.3 19.7 59 686-751 276-334 (368)
243 2ymu_A WD-40 repeat protein; u 47.2 3.8E+02 0.013 30.8 18.1 56 686-749 511-566 (577)
244 1vyh_C Platelet-activating fac 46.1 3.5E+02 0.012 30.1 19.1 79 469-570 194-272 (410)
245 1kb0_A Quinohemoprotein alcoho 46.0 44 0.0015 41.3 9.1 63 952-1020 139-207 (677)
246 3ei3_B DNA damage-binding prot 45.7 3.2E+02 0.011 29.6 23.6 192 469-750 75-269 (383)
247 1vyh_C Platelet-activating fac 44.5 3.7E+02 0.013 29.9 19.6 79 919-1020 110-188 (410)
248 2ad6_A Methanol dehydrogenase 44.0 90 0.0031 37.6 11.2 62 952-1020 126-193 (571)
249 2ynn_A Coatomer subunit beta'; 43.8 3.2E+02 0.011 28.9 20.4 78 919-1019 15-92 (304)
250 1w6s_A Methanol dehydrogenase 43.7 78 0.0027 38.7 10.7 81 951-1045 453-536 (599)
251 4e54_B DNA damage-binding prot 43.5 2.7E+02 0.0092 31.2 14.7 27 687-713 300-326 (435)
252 3sbq_A Nitrous-oxide reductase 43.2 47 0.0016 40.6 8.2 119 1081-1208 328-462 (638)
253 3fm0_A Protein CIAO1; WDR39,SG 42.6 3.6E+02 0.012 29.2 20.5 58 686-748 153-210 (345)
254 3mmy_A MRNA export factor; mRN 42.4 3.3E+02 0.011 28.7 19.7 59 1136-1201 276-334 (368)
255 1sq9_A Antiviral protein SKI8; 41.8 85 0.0029 34.2 9.8 80 469-565 293-397 (397)
256 3iz6_a 40S ribosomal protein R 41.4 3.9E+02 0.013 29.3 19.2 61 686-750 301-362 (380)
257 2bkl_A Prolyl endopeptidase; m 39.3 3.1E+02 0.01 33.3 15.2 16 190-205 172-187 (695)
258 1yr2_A Prolyl oligopeptidase; 39.1 6.1E+02 0.021 30.9 22.7 27 542-568 174-203 (741)
259 3v7d_B Cell division control p 39.1 4.5E+02 0.015 29.3 18.4 57 502-570 143-199 (464)
260 3dm0_A Maltose-binding peripla 39.1 1.8E+02 0.006 35.2 12.9 56 502-568 542-597 (694)
261 2ymu_A WD-40 repeat protein; u 38.1 5.1E+02 0.017 29.7 18.9 57 686-750 470-526 (577)
262 1yiq_A Quinohemoprotein alcoho 37.8 1E+02 0.0035 38.1 10.5 63 952-1020 132-200 (689)
263 3sbq_A Nitrous-oxide reductase 36.5 68 0.0023 39.3 8.2 76 631-713 328-407 (638)
264 1yr2_A Prolyl oligopeptidase; 36.5 6.7E+02 0.023 30.6 21.3 27 992-1018 174-203 (741)
265 3s9j_A Member of DUF4221 famil 36.3 49 0.0017 38.1 6.8 64 952-1020 53-117 (369)
266 3jrp_A Fusion protein of prote 35.6 4.2E+02 0.014 28.0 18.4 76 469-565 13-90 (379)
267 2gop_A Trilobed protease; beta 35.5 2.1E+02 0.0073 30.5 11.6 85 467-570 14-101 (347)
268 3dm0_A Maltose-binding peripla 34.9 6.6E+02 0.023 30.1 20.9 79 469-570 432-510 (694)
269 3jrp_A Fusion protein of prote 33.0 4.6E+02 0.016 27.7 18.6 76 919-1015 13-90 (379)
270 3iz6_a 40S ribosomal protein R 32.8 5.2E+02 0.018 28.2 17.6 28 686-713 347-374 (380)
271 3hx6_A Type 4 fimbrial biogene 32.8 81 0.0028 38.4 8.1 61 499-571 221-282 (570)
272 3fm0_A Protein CIAO1; WDR39,SG 32.4 5E+02 0.017 27.9 20.1 28 1136-1163 153-180 (345)
273 1flg_A Protein (quinoprotein e 32.1 1.7E+02 0.0057 35.5 11.0 77 501-591 466-544 (582)
274 3s9j_A Member of DUF4221 famil 32.0 59 0.002 37.5 6.6 78 475-570 36-117 (369)
275 2xzm_R RACK1; ribosome, transl 31.8 2.8E+02 0.0097 29.8 12.0 180 502-752 50-233 (343)
276 4ggc_A P55CDC, cell division c 31.5 1.2E+02 0.004 31.7 8.5 60 502-570 46-105 (318)
277 2hz6_A Endoplasmic reticulum t 30.2 46 0.0016 37.5 5.3 56 952-1020 20-76 (369)
278 3odt_A Protein DOA1; ubiquitin 29.7 1.4E+02 0.0048 31.0 8.7 72 469-565 227-298 (313)
279 4ggc_A P55CDC, cell division c 28.6 1.5E+02 0.005 30.9 8.6 60 952-1020 46-105 (318)
280 3odt_A Protein DOA1; ubiquitin 28.1 1.7E+02 0.0058 30.3 9.0 73 919-1016 227-299 (313)
281 3iuj_A Prolyl endopeptidase; h 27.9 8.8E+02 0.03 29.3 23.5 41 916-965 127-169 (693)
282 2hz6_A Endoplasmic reticulum t 27.7 51 0.0017 37.1 5.1 56 502-570 20-76 (369)
283 3lrv_A PRE-mRNA-splicing facto 26.3 6.2E+02 0.021 27.0 21.9 60 952-1019 105-164 (343)
284 1w6s_A Methanol dehydrogenase 26.2 1.5E+02 0.005 36.3 9.0 62 952-1020 132-199 (599)
285 3jro_A Fusion protein of prote 23.0 1.1E+03 0.037 28.7 18.5 62 686-749 207-271 (753)
286 3jro_A Fusion protein of prote 21.2 1.2E+03 0.04 28.4 17.0 20 694-713 169-188 (753)
287 4a5s_A Dipeptidyl peptidase 4 20.7 3.1E+02 0.011 33.5 10.6 79 62-144 37-129 (740)
288 3gre_A Serine/threonine-protei 20.5 4.3E+02 0.015 29.1 10.9 84 919-1020 216-299 (437)
No 1
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=100.00 E-value=3.1e-87 Score=775.89 Aligned_cols=359 Identities=24% Similarity=0.461 Sum_probs=336.7
Q ss_pred ceEEEEEeeeeeecCCHHHHHhhccCCCcccCCCcccceEE--eCCeEEEEcccCCCCCCcEEEEEECCCCC----CCCc
Q psy11781 376 FQVVFRWKIMDFVFRDNKQKANLIRSNKFIPENNLPLGIGI--WRSTIFLSFPKWKAGIPFTLASFNMNDPS----ESPI 449 (1228)
Q Consensus 376 l~~v~~Wk~ldf~~p~~~~r~~ai~~g~y~p~n~~P~gv~v--~~gRiFvt~PR~~~gvP~TL~~v~~~~~~----~sp~ 449 (1228)
++++||||+|||+ ||++|.|+|+|++|+||++ ++||+|||+|||+.|+|+||++|.....+ .+|+
T Consensus 2 ~~~~~~Wk~ld~~---------ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ 72 (381)
T 3q6k_A 2 DTQGYKWKQLLYN---------NVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSP 72 (381)
T ss_dssp CCEEEEESSCCBT---------TSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSC
T ss_pred cceEEEEEeeccc---------cccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcc
Confidence 6899999999995 9999999999999999999 79999999999999999999999864322 3788
Q ss_pred c-cCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCCCCcccCcCc---cCCCEEEEEECCCC--cEEEEEECCCcc
Q psy11781 450 L-LPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQ---LCPPKIMVFDLKTN--TLIRKYILPTAQ 523 (1228)
Q Consensus 450 l-~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~---~~~PKLvvfDL~td--~vi~~y~~p~~v 523 (1228)
| +|||+| ++|++|+||++++||+||||||||+|.++..+++.| .|+|||++|||+|| +++|+|+||+++
T Consensus 73 ll~PYP~w-----~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~ 147 (381)
T 3q6k_A 73 LLNKFSGH-----KTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL 147 (381)
T ss_dssp CBEECTTC-----SSSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG
T ss_pred cccCCCCC-----ccccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh
Confidence 8 999998 579999999999999999999999999998887778 99999999999999 999999999999
Q ss_pred cccCCCceeEEEEeec---CCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceee
Q psy11781 524 VFEGSLFSNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMA 600 (1228)
Q Consensus 524 ~~~~S~l~di~VD~~~---~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIA 600 (1228)
++++|+|++|+||+.. +|+++||||||++.+||||||+++|++|||+|++|+|+ .++.|+++|++|+|++|++|||
T Consensus 148 ~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIa 226 (381)
T 3q6k_A 148 VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGIT 226 (381)
T ss_dssp CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEE
T ss_pred cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEE
Confidence 9999999999999643 79999999999999999999999999999999999999 6679999999999999999999
Q ss_pred cCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccc
Q psy11781 601 ISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR 680 (1228)
Q Consensus 601 Lsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~ 680 (1228)
|||...+ ++|+||||||+|++||+|+|++|+++++ ...|+.+|+|
T Consensus 227 Lsp~~~~----------------------------~~~~LYf~plss~~ly~V~T~~L~~~~~-------~~~v~~~G~k 271 (381)
T 3q6k_A 227 LGDRDSE----------------------------GNRPAYYLAGSAIKVYSVNTKELKQKGG-------KLNPELLGNR 271 (381)
T ss_dssp ECCCCTT----------------------------SCCEEEEEESSCSEEEEEEHHHHSSTTC-------CCCCEEEEEC
T ss_pred ecCCcCC----------------------------CCeEEEEEECCCCcEEEEEHHHhhCcch-------hhceEEeeec
Confidence 9996432 5899999999999999999999999873 6789999999
Q ss_pred cccccccceEEc-cCCcEEEEcCCCCeEEEEeCCCC-ccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCcccccc
Q psy11781 681 FRNTQASASAIN-SNGVMFYNLVTKHSVGCWNTKTK-VYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQYLY 758 (1228)
Q Consensus 681 g~~~qs~G~a~D-~~G~LY~t~~~~~aI~~wn~~~~-~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl~~~~~ 758 (1228)
|+.+|+.|+++| ++|+|||+++++++|+|||++ + +|+++++++|++++ +|+||++|+|+.+|+|||++||||+|++
T Consensus 272 g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~-~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~l~~~~~ 349 (381)
T 3q6k_A 272 GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ-KMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNGFPPIRK 349 (381)
T ss_dssp CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT-SCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECSCCSSTT
T ss_pred CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC-CCccccCceEEEEECC-CccccCeEEECCCCeEEEEECcchHhhc
Confidence 977889999998 999999999999999999999 8 99999999999777 9999999999999999999999999999
Q ss_pred CCC-CCccccEEEEEE-ecchhccCCCCCC
Q psy11781 759 GFL-DFNVYNYRILVA-NSNDIKNNNQPPN 786 (1228)
Q Consensus 759 ~~~-d~~e~nfrI~r~-~v~~~i~~t~c~~ 786 (1228)
|++ |.+|+||||||+ +++++|+||+|+.
T Consensus 350 g~l~d~~~~nfrI~r~~~~~~~i~~t~C~~ 379 (381)
T 3q6k_A 350 SEKFKYDFPRYRLMRIMDTQEAIAGTACDM 379 (381)
T ss_dssp GGGCCCSSCSEEEEEESCHHHHHTTSTTSC
T ss_pred CCcCCCCcCCEEEEEecCHHHHhcCCCCCC
Confidence 999 999999999999 9999999999984
No 2
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=100.00 E-value=2.4e-86 Score=768.36 Aligned_cols=350 Identities=24% Similarity=0.483 Sum_probs=327.8
Q ss_pred cEEEEEEeeeeeecCChHHHHhhccCCCCccCCCcccceEE--eCCeEEEEeccCCCCCCcEEEEEECCCC----CCCCc
Q psy11781 826 FQVVFRWKIMDFVFRDNKQKANLIRSNKFIPENNLPLGIGI--WRSTIFLSFPKWKAGIPFTLASFNMNDP----SESPI 899 (1228)
Q Consensus 826 ~~~vy~Wk~ldf~fp~~~~r~~ai~~g~y~p~n~~p~gv~v--~~gRiFvt~PR~~~gvP~TLa~v~~~~~----~~sP~ 899 (1228)
++++||||+|||+ ||++|+|+|+|++|+||++ ++||+|||+|||+.|+|+||++|..... +.+|+
T Consensus 2 ~~~~~~Wk~ld~~---------ai~~g~y~p~n~~P~gv~vd~~~gRiFvt~PR~~~gvp~TL~~v~~~~~~~~~~~~p~ 72 (381)
T 3q6k_A 2 DTQGYKWKQLLYN---------NVTPGSYNPDNMISTAFAYDAEGEKLFLAVPRKLPRVPYTLAEVDTKNSLGVKGKHSP 72 (381)
T ss_dssp CCEEEEESSCCBT---------TSCTTSSCGGGCCCCEEEEETTTTEEEEECCTTSTTCSCSEEEEEHHHHTTCTTCSSC
T ss_pred cceEEEEEeeccc---------cccCCCcccCccceeeeeeecCCCcEEEEeCCCCCCCCcEEEEEeCCCCcccccCCcc
Confidence 6899999999996 9999999999999999999 7999999999999999999999986332 23788
Q ss_pred c-ccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCCCCccccccc---cCCCEEEEEECCCC--cEEEEEECCCCc
Q psy11781 900 L-LPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQ---LCPPKIMVFDLKTN--TLIRKYILPTAQ 973 (1228)
Q Consensus 900 l-~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~---~~~pKLvvfDL~td--~lir~y~~p~~~ 973 (1228)
| +|||+| ++|++|+||++|+||+||||||||+|.++.++++.| .|+|||++|||+|| +++|+|+||+++
T Consensus 73 ll~PYP~w-----~~~~~lvsV~~v~iD~~~rLWVLDtG~~~~~~~~~~~~~~~~pkLv~~DL~t~~~~li~~y~~p~~~ 147 (381)
T 3q6k_A 73 LLNKFSGH-----KTGKELTSIYQPVIDDCRRLWVVDIGSVEYRSRGAKDYPSHRPAIVAYDLKQPNYPEVVRYYFPTRL 147 (381)
T ss_dssp CBEECTTC-----SSSCSSSCEEEEEECTTCEEEEEECSSCSSCSTTGGGSCCCCCEEEEEESSSTTCCEEEEEECCGGG
T ss_pred cccCCCCC-----ccccceEEeeEEEEcCCCcEEEEeCCCcCcCCCccccCCCCCceEEEEECCCCCceeEEEEECCHHh
Confidence 8 999998 589999999999999999999999999998887788 99999999999999 999999999999
Q ss_pred ccCCCcceeeEEEeec---CCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCcccee
Q psy11781 974 VFEGSLFSNIVTEVVE---DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMA 1050 (1228)
Q Consensus 974 ~~~~S~l~di~VD~~~---~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~Gia 1050 (1228)
++++|+|++|+||+.. +|+++||||||++.+||||||+++|++||++|++|+|| .++.|+|+|++|+|++|++|||
T Consensus 148 ~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd-~~~~~~i~G~~~~~~~Gi~gIa 226 (381)
T 3q6k_A 148 VEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAE-RPTKFDYGGKEYEFKAGIFGIT 226 (381)
T ss_dssp CCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCC-SCEEEEETTEEEEECCCEEEEE
T ss_pred cccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccc-cCcceEECCEEeEeccCceEEE
Confidence 9999999999999643 79999999999999999999999999999999999999 6789999999999999999999
Q ss_pred cCccccccccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccc
Q psy11781 1051 ISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR 1130 (1228)
Q Consensus 1051 Lsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~r 1130 (1228)
|+|...+ ++|+||||||+|++||+|+|++|+|+++ ..+|+.+|+|
T Consensus 227 Lsp~~~~----------------------------~~~~LYf~plss~~ly~V~T~~L~~~~~-------~~~v~~~G~k 271 (381)
T 3q6k_A 227 LGDRDSE----------------------------GNRPAYYLAGSAIKVYSVNTKELKQKGG-------KLNPELLGNR 271 (381)
T ss_dssp ECCCCTT----------------------------SCCEEEEEESSCSEEEEEEHHHHSSTTC-------CCCCEEEEEC
T ss_pred ecCCcCC----------------------------CCeEEEEEECCCCcEEEEEHHHhhCcch-------hhceEEeeec
Confidence 9985322 5899999999999999999999999873 6789999999
Q ss_pred cCCCCcccEEEc-CCCcEEEEecCCCeEEEEeCCCC-ccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCchhhhc
Q psy11781 1131 FRNTQASASAIN-SNGVMFYNLVTKHSVGCWNTKTK-VYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQYLY 1208 (1228)
Q Consensus 1131 g~~sqs~g~~~D-~~G~LY~t~~~~~aI~~wn~~~~-~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~~~~~ 1208 (1228)
|+++|+.|+++| ++|+|||+++++++|+|||++ + +|+++|+++|++++ +|+||++|+||.+|+|||++||||+|++
T Consensus 272 g~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~-~~~~~~~n~~~l~~d~-~l~~pd~~~i~~~g~Lwv~sn~l~~~~~ 349 (381)
T 3q6k_A 272 GKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ-KMPLRMKNTDVVYTSS-RFVFGTDISVDSKGGLWFMSNGFPPIRK 349 (381)
T ss_dssp CTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT-SCSBCGGGEEEEEECT-TCCSEEEEEECTTSCEEEEECSCCSSTT
T ss_pred CCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC-CCccccCceEEEEECC-CccccCeEEECCCCeEEEEECcchHhhc
Confidence 988899999998 999999999999999999999 8 99999999999976 9999999999999999999999999999
Q ss_pred CCC-CCCcccEEEEEE-ecCC
Q psy11781 1209 GFL-DFNVYNYRILVA-NSND 1227 (1228)
Q Consensus 1209 ~~~-d~~e~nfrI~r~-~v~~ 1227 (1228)
|++ |.+|+||||||+ ++++
T Consensus 350 g~l~d~~~~nfrI~r~~~~~~ 370 (381)
T 3q6k_A 350 SEKFKYDFPRYRLMRIMDTQE 370 (381)
T ss_dssp GGGCCCSSCSEEEEEESCHHH
T ss_pred CCcCCCCcCCEEEEEecCHHH
Confidence 999 999999999999 8765
No 3
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=9e-39 Score=363.51 Aligned_cols=307 Identities=18% Similarity=0.341 Sum_probs=255.9
Q ss_pred CcccceEEe-CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 859 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 937 (1228)
Q Consensus 859 ~~p~gv~v~-~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDtG 937 (1228)
..|.||+++ +||+||+.|||..|+ ++|.++. ++ .++|||+|+- ..|..|.++++|.+|+||+|||+|+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~---~g---~~~~~p~~~~---~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELT---QD---GLIPFPPQSG---NAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEE---TT---EEEESCCCCS---SCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCc-eEEEEEC---CC---CeecCCCccc---CcccceeEeeEEEEcCCCcEEEEcCC
Confidence 589999998 899999999998887 8999997 23 6899999873 35688999999999999999999998
Q ss_pred CCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC---CCCeEEEEECCCC
Q psy11781 938 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV---FRYGLIVYDFFKN 1014 (1228)
Q Consensus 938 ~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~---~~~gLIVydl~~g 1014 (1228)
. .+.|.++|++||++|+++++++.+|.....+.+++++|+||. +++++||||+ +..+|+|||++++
T Consensus 87 ~-------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~----~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 87 N-------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL----IHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp H-------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET----TTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred C-------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEec----CCCEEEEEcCccCCCCeEEEEECCCC
Confidence 4 246899999999999999999999987777788999999994 3579999999 7899999999999
Q ss_pred eEEEee--cCCcCcCCCcceeEEcCEEEEee--CCccceecCccccccccCCCccccccccccccCcccc-ceecCCCce
Q psy11781 1015 TSYRLT--HPYMYPEPTQSTYILDNLKFRWV--DGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRY 1089 (1228)
Q Consensus 1015 ~swRv~--h~s~~pdP~~~~~~i~G~~f~~~--dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d-i~ls~d~r~ 1089 (1228)
+.||++ |+++.+++ ..+.++|+.|... +|.. .+ -..+++ |++|||+++
T Consensus 156 ~~~r~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~--~~-----------------------~~~~~~gia~s~dg~~ 208 (343)
T 2qe8_A 156 LAARVLQGYPGIAPED--IDLVIDGVPVQIGQPDGTV--IR-----------------------PHLGVNGIVLDAENEW 208 (343)
T ss_dssp CEEEECTTCTTTSCCS--CCCEETTEECBEECTTSCE--EC-----------------------CCCCEEEEEECTTSCE
T ss_pred CEEEEecCCCcccccc--cceeECCEEEEeccCCCce--ec-----------------------eecccceeEeccCCCE
Confidence 999998 56888877 5688899877521 1210 00 012334 777889999
Q ss_pred EEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeC-CCCccc
Q psy11781 1090 MYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNT-KTKVYL 1168 (1228)
Q Consensus 1090 LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~-~~~~~~ 1168 (1228)
|||+++.+.++|++++..|++..+ ...+....++.+|+++ +++|+++|++|+||+++...++|.|||+ + +.
T Consensus 209 ly~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~g~~g---~pdgia~d~~G~l~va~~~~~~V~~~d~~~-G~-- 280 (343)
T 2qe8_A 209 LYLSPMHSTSMYRIKSADLSNLQL--TDAELGSKIERYSEKP---ICDGISIDKDHNIYVGDLAHSAIGVITSAD-RA-- 280 (343)
T ss_dssp EEEEESSCSEEEEEEHHHHTCTTC--CHHHHHTTCEEEEECC---SCSCEEECTTCCEEEEEGGGTEEEEEETTT-TE--
T ss_pred EEEEeCCCCeEEEEEHHHhcCCCC--ChhhhhcceEecccCC---CCceEEECCCCCEEEEccCCCeEEEEECCC-CC--
Confidence 999999999999999999998775 4445556677778776 6899999999999999999999999999 5 43
Q ss_pred cCCeeEEEecCCceecCCceEEeCCCcEEEEeCCchh---hhcCCCCCCcccEEEEEEecC
Q psy11781 1169 PQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ---YLYGFLDFNVYNYRILVANSN 1226 (1228)
Q Consensus 1169 ~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~~---~~~~~~d~~e~nfrI~r~~v~ 1226 (1228)
+..++.+ +++.||++++++++|+|||+++++++ |.++ +|..+.||+|||+++.
T Consensus 281 ---~~~~~~~-~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~~~-~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 281 ---YKLLVTD-EKLSWTDSFNFGSDGYLYFDCNQLHHSAPLNAG-ENISAPPYYIFRLKPL 336 (343)
T ss_dssp ---EEEEEEC-GGGSCEEEEEECTTSCEEEEECCGGGSGGGBTT-CCCCCSCEEEEEECCS
T ss_pred ---EEEEEEC-CceecCCeeEECCCCcEEEEeCccccccccccC-CCcCcCCeEEEEEECC
Confidence 4556653 47999999999999999999998865 4444 8999999999999875
No 4
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=100.00 E-value=1.9e-38 Score=360.82 Aligned_cols=300 Identities=18% Similarity=0.345 Sum_probs=254.3
Q ss_pred CcccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 409 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 487 (1228)
Q Consensus 409 ~~P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG 487 (1228)
..|.||+++ +||+||+.|||..|+ ++|.++. ++.++|||+|+. ..|.+|.+|++|.+|+||||||+|+|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~-~~l~~~~------~g~~~~~p~~~~---~~~~~~~~p~gv~~d~~g~L~v~D~g 86 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPE-MQVAELT------QDGLIPFPPQSG---NAIITFDTVLGIKSDGNGIVWMLDNG 86 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCS-CSEEEEE------TTEEEESCCCCS---SCCCCCSCEEEEEECSSSEEEEEECH
T ss_pred CCcceEEECCCCCEEEEeCCCCCCc-eEEEEEC------CCCeecCCCccc---CcccceeEeeEEEEcCCCcEEEEcCC
Confidence 589999998 899999999998887 8999998 257899999873 25788999999999999999999998
Q ss_pred CCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecC---CCCeEEEEEcCCC
Q psy11781 488 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV---FRYGLIVYDFFKN 564 (1228)
Q Consensus 488 ~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs---~~~gLIVyDl~~g 564 (1228)
. .+.|.++|++||++|+++++++.+|..+....+++++|+||. +++++||+|+ ...+|+|||+.++
T Consensus 87 ~-------~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~----~~g~~yvtd~~~~~~~~i~v~d~~~g 155 (343)
T 2qe8_A 87 N-------QSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDL----IHNFVYISDPAPDDKAALIRVDLQTG 155 (343)
T ss_dssp H-------HHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEET----TTTEEEEEECCSGGGCEEEEEETTTC
T ss_pred C-------CcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEec----CCCEEEEEcCccCCCCeEEEEECCCC
Confidence 4 246899999999999999999999987777778999999993 4679999999 7899999999999
Q ss_pred eEEEEcCC--CCCcCCCCcceEEcCeEee----------ecCCcceeecCcccCCcccCCCccccccccccccCcccccc
Q psy11781 565 TSYRLTHP--YMYPEPTQSTYILDNLKFR----------WVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKT 632 (1228)
Q Consensus 565 ~swRv~~~--s~~pdP~~~~~~i~G~~f~----------~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 632 (1228)
+.||+.+. .+.|++ ..+.++|+.|. |..|.+|||++|
T Consensus 156 ~~~r~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~----------------------------- 204 (343)
T 2qe8_A 156 LAARVLQGYPGIAPED--IDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDA----------------------------- 204 (343)
T ss_dssp CEEEECTTCTTTSCCS--CCCEETTEECBEECTTSCEECCCCCEEEEEECT-----------------------------
T ss_pred CEEEEecCCCcccccc--cceeECCEEEEeccCCCceeceecccceeEecc-----------------------------
Confidence 99999854 777776 46788898775 445666666665
Q ss_pred ccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeC
Q psy11781 633 IRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNT 712 (1228)
Q Consensus 633 is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~ 712 (1228)
++++||++++.+.++|+++++.|+++.+ ...+....++.+|++| +++|+++|++|+||+++...++|.|||+
T Consensus 205 ---dg~~ly~~~~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~g~~g---~pdgia~d~~G~l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 205 ---ENEWLYLSPMHSTSMYRIKSADLSNLQL--TDAELGSKIERYSEKP---ICDGISIDKDHNIYVGDLAHSAIGVITS 276 (343)
T ss_dssp ---TSCEEEEEESSCSEEEEEEHHHHTCTTC--CHHHHHTTCEEEEECC---SCSCEEECTTCCEEEEEGGGTEEEEEET
T ss_pred ---CCCEEEEEeCCCCeEEEEEHHHhcCCCC--ChhhhhcceEecccCC---CCceEEECCCCCEEEEccCCCeEEEEEC
Confidence 7899999999999999999999988774 4444556677777775 6999999999999999999999999999
Q ss_pred -CCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCccc---cccCCCCCccccEEEEEEecc
Q psy11781 713 -KTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ---YLYGFLDFNVYNYRILVANSN 776 (1228)
Q Consensus 713 -~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl~~---~~~~~~d~~e~nfrI~r~~v~ 776 (1228)
+ +. +..++. .+++.||++++++++|+|||+++++++ |.++ ++..+.||+|||+++.
T Consensus 277 ~~-G~-----~~~~~~-~~~~~~p~~va~~~~g~l~v~~~~~~~~~~f~~~-~~~~~~~~~i~~~~~~ 336 (343)
T 2qe8_A 277 AD-RA-----YKLLVT-DEKLSWTDSFNFGSDGYLYFDCNQLHHSAPLNAG-ENISAPPYYIFRLKPL 336 (343)
T ss_dssp TT-TE-----EEEEEE-CGGGSCEEEEEECTTSCEEEEECCGGGSGGGBTT-CCCCCSCEEEEEECCS
T ss_pred CC-CC-----EEEEEE-CCceecCCeeEECCCCcEEEEeCccccccccccC-CCcCcCCeEEEEEECC
Confidence 5 43 455554 447999999999999999999997754 5544 8999999999999975
No 5
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.53 E-value=3.8e-10 Score=139.39 Aligned_cols=482 Identities=10% Similarity=0.061 Sum_probs=265.6
Q ss_pred CcceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCC
Q psy11781 465 NSLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 543 (1228)
Q Consensus 465 ~~lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~ 543 (1228)
..+..+.++.+|. .++||+.|.+. -+|..+++........ .+... -...+.|+||. .+
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~------------~~I~r~~~~g~~~~~~-v~~~~----~~~P~GlAvD~----~~ 95 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQN-VVVSG----LLSPDGLACDW----LG 95 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC-----CEE-EECSS----CSCEEEEEEET----TT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCC------------CeEEEEEccCCCceEE-EEeCC----CCCcCeEEEEe----cC
Confidence 4577789999996 78999999864 2588999876532111 22111 13567899993 36
Q ss_pred eEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccc
Q psy11781 544 VFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHH 623 (1228)
Q Consensus 544 ~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~ 623 (1228)
+.+|++|.....|.|+|+... ..+++. .+ ......|||+.|
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~-~~~~l~--------------~~----~l~~P~~Iavdp-------------------- 136 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGS-LRKVLF--------------WQ----ELDQPRAIALDP-------------------- 136 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSC-SCEEEE--------------CS----SCSCCCCEEEET--------------------
T ss_pred CEEEEEeCCCCEEEEEECCCC-CEEEEE--------------eC----CCCCCceEEEec--------------------
Confidence 899999999999999998763 333221 00 012234566654
Q ss_pred ccCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEc
Q psy11781 624 YNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNL 701 (1228)
Q Consensus 624 ~~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~ 701 (1228)
.++.|||+-... .++++... +++ ..+.+.... ...+.|+++| .+|.||+++
T Consensus 137 ------------~~g~ly~tD~g~~~~I~r~~~----dG~----------~~~~l~~~~-~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 137 ------------SSGFMYWTDWGEVPKIERAGM----DGS----------SRFIIINSE-IYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp ------------TTTEEEEEECSSSCEEEEEET----TSC----------SCEEEECSS-CSSEEEEEEETTTTEEEEEE
T ss_pred ------------CCCeEEEeccCCCCEEEEEEC----CCC----------ceEEEEeCC-CCCCcEEEEEccCCEEEEEe
Confidence 567899998653 34655542 222 111222111 2358999999 689999999
Q ss_pred CCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCccc---ccc-CCCCCc------cccEEEE
Q psy11781 702 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ---YLY-GFLDFN------VYNYRIL 771 (1228)
Q Consensus 702 ~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl~~---~~~-~~~d~~------e~nfrI~ 771 (1228)
...+.|.+.+.+ +.. ...+. ...+..|.||+++.+ .||+..-.-.. +.. .+.+.. ..++-|.
T Consensus 190 ~~~~~I~~~~~d-G~~----~~~~~--~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~ 261 (619)
T 3s94_A 190 AKLNFIHKSNLD-GTN----RQAVV--KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIH 261 (619)
T ss_dssp TTTCCEEEESSS-CCE----EC-----------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEE
T ss_pred CCCCeEEEecCC-CCc----cEEEE--eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEE
Confidence 999999999998 532 23332 235789999999866 89998733322 211 000100 0111111
Q ss_pred EEec-chhccCCCCCCCCCCCCCCCCCCCCCcccCCCCCcccccCCCCCCCCCCccEEEEEEeeeeeecCChHHHHhhcc
Q psy11781 772 VANS-NDIKNNNQPPNTKSNAGPARPSTDQTKSFHPSVPSIYPSVPSNAYPSSSHFQVVFRWKIMDFVFRDNKQKANLIR 850 (1228)
Q Consensus 772 r~~v-~~~i~~t~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~Wk~ldf~fp~~~~r~~ai~ 850 (1228)
-... ........|... + -.++++=.. ++.
T Consensus 262 v~~~~~qp~~~n~C~~~---n-----------------------------g~Cs~lCl~-----------~~~------- 291 (619)
T 3s94_A 262 AFSQQRQPNATNPCGID---N-----------------------------GGCSHLCLM-----------SPV------- 291 (619)
T ss_dssp ECCGGGSCCCCCTTTTT---G-----------------------------GGCSSEEEE-----------CSS-------
T ss_pred EEccccCCCccccccCC---C-----------------------------CcccceEEC-----------CCC-------
Confidence 1000 000001122110 0 001111110 000
Q ss_pred CCCCccCCCcccceEEe-C-------CeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEE
Q psy11781 851 SNKFIPENNLPLGIGIW-R-------STIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFR 922 (1228)
Q Consensus 851 ~g~y~p~n~~p~gv~v~-~-------gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~ 922 (1228)
.+.|. =.-|.|.... + ..-|+-+-+.. .+..+.......+....|. .++.++.+
T Consensus 292 ~~~~~--C~C~~g~~l~~d~~~C~~~~~~~Ll~~~~~-----~i~~i~l~~~~~~~~~~~~-----------~~l~~~~~ 353 (619)
T 3s94_A 292 KPFYQ--CACPTGVKLLENGKTCKDGATELLLLARRT-----DLRRISLDTPDFTDIVLQL-----------EDIRHAIA 353 (619)
T ss_dssp TTSEE--EECCTTCCBCTTSSCBCSSCSEEEEEEESS-----CEEEEESSSTTCCCEECCC-----------SCCSSEEE
T ss_pred CCCce--EeCCchheecccCcccCCCCceEEEEEccc-----ceEEEecCCCccceeEEec-----------cccCccEE
Confidence 00000 0011222111 1 11122211111 2334443222111112222 34777899
Q ss_pred EEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC
Q psy11781 923 MSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 1001 (1228)
Q Consensus 923 v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~ 1001 (1228)
+..|. .++|++.|.+.- +|..+++........ +...+ ..-..|+||. ..+.+|+||.
T Consensus 354 ld~d~~~~~ly~sD~~~~------------~I~r~~~~g~~~~~v--~~~~~----~~p~GlAvD~----~~~~lY~tD~ 411 (619)
T 3s94_A 354 IDYDPVEGYIYWTDDEVR------------AIRRSFIDGSGSQFV--VTAQI----AHPDGIAVDW----VARNLYWTDT 411 (619)
T ss_dssp EEEETTTTEEEEEETTTT------------EEEEEETTSCSCEEE--ECSSC----SCCCEEEEET----TTTEEEEEET
T ss_pred EEEEcCCCeEEEEeCCCC------------eEEEEEcCCCccEEE--EECCC----CCcCceEEec----ccCcEEEEeC
Confidence 99997 789999998643 688899876533221 11211 3345799994 2578999999
Q ss_pred CCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccc
Q psy11781 1002 FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDK 1081 (1228)
Q Consensus 1002 ~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di 1081 (1228)
+...|-|.++... ..+++- .+ . .+..-+ |
T Consensus 412 ~~~~I~v~~~~G~-~~~~l~--------------~~-~---l~~P~~--------------------------------i 440 (619)
T 3s94_A 412 GTDRIEVTRLNGT-MRKILI--------------SE-D---LEEPRA--------------------------------I 440 (619)
T ss_dssp TTTEEEEEETTSC-SCEEEE--------------CT-T---CCSEEE--------------------------------E
T ss_pred CCCcEEEEeCCCC-eEEEEE--------------EC-C---CCCeee--------------------------------E
Confidence 9999999998753 333211 00 0 011112 5
Q ss_pred eecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEecCCCeEEE
Q psy11781 1082 TIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKHSVGC 1159 (1228)
Q Consensus 1082 ~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~~~~aI~~ 1159 (1228)
+++|....|||+-... .++++... |.+ ..+.+.... -..+.|+++| .+|.||+++...+.|.+
T Consensus 441 avdp~~G~ly~tD~g~~~~I~r~~~----dG~----------~~~~l~~~~-l~~P~GlalD~~~~~LY~aD~~~~~I~~ 505 (619)
T 3s94_A 441 VLDPMVGYMYWTDWGEIPKIERAAL----DGS----------DRVVLVNTS-LGWPNGLALDYDEGKIYWGDAKTDKIEV 505 (619)
T ss_dssp EEETTTTEEEEEECSSSCEEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEcCCCcEEEecCCCCCEEEEEcc----CCC----------ccEEEEeCC-CCCCeeeEEcccCCEEEEEECCCCEEEE
Confidence 5666777899987653 55666542 222 112222221 1357899999 68999999999999999
Q ss_pred EeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCchh
Q psy11781 1160 WNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ 1205 (1228)
Q Consensus 1160 wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~~ 1205 (1228)
.+.+ +. +.+++.. ..+..|.||+++.+ +||++..+.+.
T Consensus 506 ~~~d-G~----~~~~~~~--~~l~~P~glav~~~-~ly~tD~~~~~ 543 (619)
T 3s94_A 506 MNTD-GT----GRRVLVE--DKIPHIFGFTLLGD-YVYWTDWQRRS 543 (619)
T ss_dssp EESS-SC----CCEEEEE--CCCCSSCCEEEETT-EEEEECTTSSC
T ss_pred EecC-CC----ceEEEec--cCCCCcEEEEEECC-EEEEeecCCCe
Confidence 9998 54 3345543 46889999999755 99999866554
No 6
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.49 E-value=6.4e-10 Score=137.60 Aligned_cols=427 Identities=12% Similarity=0.121 Sum_probs=236.4
Q ss_pred eEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccC
Q psy11781 532 NIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKR 611 (1228)
Q Consensus 532 di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~ 611 (1228)
.|.+| +.++.+|+||.....|.++++.....-.+.. .| .....|||+++
T Consensus 41 ~l~~d----~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~--------------~g-----~~~P~GlAvD~-------- 89 (628)
T 4a0p_A 41 ALDFD----VTDNRIYWTDISLKTISRAFMNGSALEHVVE--------------FG-----LDYPEGMAVDW-------- 89 (628)
T ss_dssp EEEEE----TTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------------SS-----CSCCCEEEEET--------
T ss_pred EEEEE----CCCCEEEEEECCCCeEEEEECCCCCcEEEEe--------------CC-----CCCcceEEEEe--------
Confidence 45555 4678999999988888888876532222211 01 01244666654
Q ss_pred CCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEE
Q psy11781 612 HPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAI 691 (1228)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~ 691 (1228)
.++.|||.-....++..++. +++. .+.+...+ ..++.|+++
T Consensus 90 ------------------------~~~~LY~tD~~~~~I~v~~~----dG~~----------~~~l~~~~-l~~P~~iav 130 (628)
T 4a0p_A 90 ------------------------LGKNLYWADTGTNRIEVSKL----DGQH----------RQVLVWKD-LDSPRALAL 130 (628)
T ss_dssp ------------------------TTTEEEEEETTTTEEEEEET----TSTT----------CEEEECSS-CCCEEEEEE
T ss_pred ------------------------CCCEEEEEECCCCEEEEEec----CCCc----------EEEEEeCC-CCCcccEEE
Confidence 56789999887777777663 2221 11222111 246899999
Q ss_pred c-cCCcEEEEcCC-CCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCC-CcEEEEecCccccccCCCCCccccE
Q psy11781 692 N-SNGVMFYNLVT-KHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPN-DNIWILSNKLHQYLYGFLDFNVYNY 768 (1228)
Q Consensus 692 D-~~G~LY~t~~~-~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~d-g~LyVlsnrl~~~~~~~~d~~e~nf 768 (1228)
| .+|.||+++.. ...|.+.+++ +. +..++. ..+.||.||++|.+ +.||+.....+
T Consensus 131 dp~~G~lY~tD~g~~~~I~r~~~d-G~----~~~~l~---~~~~~P~GlalD~~~~~LY~aD~~~~-------------- 188 (628)
T 4a0p_A 131 DPAEGFMYWTEWGGKPKIDRAAMD-GS----ERTTLV---PNVGRANGLTIDYAKRRLYWTDLDTN-------------- 188 (628)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETT-SC----SCEEEE---CSCSSEEEEEEETTTTEEEEEETTTT--------------
T ss_pred ccCCCeEEEeCCCCCCEEEEEeCC-CC----ceEEEE---CCCCCcceEEEccccCEEEEEECCCC--------------
Confidence 9 68999999975 7899999998 43 334554 26899999999974 68999875432
Q ss_pred EEEEEecchhccCCCCCCCCCCCCCCCCCCCCCcccCCCCCcccccCCCCCCCCCCccEEEEEEeeeeeecCChHHHHhh
Q psy11781 769 RILVANSNDIKNNNQPPNTKSNAGPARPSTDQTKSFHPSVPSIYPSVPSNAYPSSSHFQVVFRWKIMDFVFRDNKQKANL 848 (1228)
Q Consensus 769 rI~r~~v~~~i~~t~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vy~Wk~ldf~fp~~~~r~~a 848 (1228)
+|++++++. + ..+++.
T Consensus 189 ~I~~~d~dG----~------------------------------------------~~~v~~------------------ 204 (628)
T 4a0p_A 189 LIESSNMLG----L------------------------------------------NREVIA------------------ 204 (628)
T ss_dssp EEEEEETTS----C------------------------------------------SCEEEE------------------
T ss_pred EEEEEcCCC----C------------------------------------------ceEEee------------------
Confidence 466666421 0 001110
Q ss_pred ccCCCCccCCCcccceEEeCCeEEEEeccCCCCCCcEEEEEECCCCCC---------CC--------ccccCCCCCcCCC
Q psy11781 849 IRSNKFIPENNLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSE---------SP--------ILLPYPNWSYFDD 911 (1228)
Q Consensus 849 i~~g~y~p~n~~p~gv~v~~gRiFvt~PR~~~gvP~TLa~v~~~~~~~---------sP--------~l~PYP~~~wn~~ 911 (1228)
. .-.-|.|+++.++++|+|= |..+ ++..++...... .| ..+|=.+.=....
T Consensus 205 --~-----~l~~P~glav~~~~ly~tD--~~~~---~I~~~dk~tg~~~~~l~~~~~~p~~i~v~~~~~q~~~n~C~~~n 272 (628)
T 4a0p_A 205 --D-----DLPHPFGLTQYQDYIYWTD--WSRR---SIERANKTSGQNRTIIQGHLDYVMDILVFHSSRQSGWNECASSN 272 (628)
T ss_dssp --E-----CCSCEEEEEEETTEEEEEE--TTTT---EEEEEETTTCCSCEEEECSCCSCCEEEEECGGGSCCCCTTTTTG
T ss_pred --c-----cCCCceEEEEECCEEEEec--CCCC---EEEEEECCCCCceEEEecCCCCcceeeeeeecccccceEeccCC
Confidence 0 1124778888888888885 4322 333333211100 00 1111111100011
Q ss_pred CCCCcc--eEEEEEEEeCCCcEEEEeCCCCCccccccccCC--CEEEEEECCCCcEEEEEECCCC----cccCCCcce-e
Q psy11781 912 SNCNSL--ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCP--PKIMVFDLKTNTLIRKYILPTA----QVFEGSLFS-N 982 (1228)
Q Consensus 912 ~~c~~l--vSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~--pKLvvfDL~td~lir~y~~p~~----~~~~~S~l~-d 982 (1228)
+.|+.+ ....+-..=.|-.=+.|+.-. ..|. ...+.|- +...|+++.+... +..+-..+. -
T Consensus 273 g~C~~~C~~~~~~~~~C~C~~g~~l~~d~--------~~C~~~~~~Ll~s--~~~~i~~i~l~~~~~~~~~l~~~~~~~~ 342 (628)
T 4a0p_A 273 GHCSHLCLAVPVGGFVCGCPAHYSLNADN--------RTCSAPTTFLLFS--QKSAINRMVIDEQQSPDIILPIHSLRNV 342 (628)
T ss_dssp GGCSSEEEEETTTEEEEECSTTCEECTTS--------SCEECCSSEEEEE--ETTEEEEECCCTTCCCCEECCCTTCSCE
T ss_pred CCcchhhhcCCCCCeeEEcCCCcEecccC--------CcCccccceeeee--ccceEEEEecccccCceEEEEehhcCCc
Confidence 235432 111011111243333332211 1121 1233332 2346777777432 111212222 2
Q ss_pred eEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCC
Q psy11781 983 IVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRH 1062 (1228)
Q Consensus 983 i~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~ 1062 (1228)
+.+|+. +.++.+|++|.....|.++++.......+... .+.|.. -.....||
T Consensus 343 ~~ld~d--~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~-----------~~~~~~--~~~~p~gl------------- 394 (628)
T 4a0p_A 343 RAIDYD--PLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVS-----------SVPSQN--LEIQPYDL------------- 394 (628)
T ss_dssp EEEEEE--TTTTEEEEEETTTTEEEEEETTSCSCEEEEC---------------------CCCEEEE-------------
T ss_pred eEEEEe--cCCCeEEEEecCcceEEEEEcCCCCceEEEEc-----------cccccc--ccCCcceE-------------
Confidence 445543 46789999999988888887764332222110 000000 00122344
Q ss_pred CccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc
Q psy11781 1063 PYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN 1142 (1228)
Q Consensus 1063 p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D 1142 (1228)
+++..++.|||+--...++..++ + +.+ ..+.+...+ -.++.++++|
T Consensus 395 -------------------AvD~~~~nLY~td~~~~~I~v~~---~-~G~----------~~~~l~~~~-l~~Pr~iavd 440 (628)
T 4a0p_A 395 -------------------SIDIYSRYIYWTCEATNVINVTR---L-DGR----------SVGVVLKGE-QDRPRAVVVN 440 (628)
T ss_dssp -------------------EEETTTTEEEEEETTTTEEEEEE---T-TSC----------EEEEEEECT-TCCEEEEEEE
T ss_pred -------------------EeeccCCeEEEEcCCCCEEEEEE---C-CCC----------eEEEEEeCC-CCceeeEEEe
Confidence 44556889999876655444443 2 121 112222222 1357899999
Q ss_pred C-CCcEEEEecCCC--eEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCC-CcEEEEeCCchh
Q psy11781 1143 S-NGVMFYNLVTKH--SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPN-DNIWILSNKLHQ 1205 (1228)
Q Consensus 1143 ~-~G~LY~t~~~~~--aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~d-g~Lyvlsn~l~~ 1205 (1228)
+ +|.||+++..+. .|.+.+++ +. +..++.. +.|.||.||++|.+ +.||+...+.++
T Consensus 441 p~~g~ly~tD~g~~~~~I~r~~~d-G~----~~~~l~~--~~l~~P~gla~D~~~~~LYw~D~~~~~ 500 (628)
T 4a0p_A 441 PEKGYMYFTNLQERSPKIERAALD-GT----EREVLFF--SGLSKPIALALDSRLGKLFWADSDLRR 500 (628)
T ss_dssp TTTTEEEEEEEETTEEEEEEEETT-SC----SCEEEEC--SSCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred cCCCeEEEeecCCCCCeEEEEeCC-CC----CcEEEEe--ccCCCccEEEEeCCCCEEEEEeCCCCE
Confidence 5 999999999877 69999998 53 4455553 45999999999975 689999876654
No 7
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=99.48 E-value=1.6e-09 Score=134.07 Aligned_cols=487 Identities=13% Similarity=0.105 Sum_probs=274.2
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 466 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 466 ~lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
++.++.++..|. .++|++.|.+. -+|..+++....+...+ ... ......|+||. .++
T Consensus 35 ~~~~~~~l~~d~~~~~lywtD~~~------------~~I~r~~~~g~~~~~v~--~~g----~~~P~GlAvD~----~~~ 92 (628)
T 4a0p_A 35 GVKEASALDFDVTDNRIYWTDISL------------KTISRAFMNGSALEHVV--EFG----LDYPEGMAVDW----LGK 92 (628)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEE--CSS----CSCCCEEEEET----TTT
T ss_pred CCCceEEEEEECCCCEEEEEECCC------------CeEEEEECCCCCcEEEE--eCC----CCCcceEEEEe----CCC
Confidence 467899999996 78999999964 25889999765443222 111 13456899994 468
Q ss_pred EEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccc
Q psy11781 545 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 624 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~ 624 (1228)
.+|++|.+...|.|.++.... .+++-. .+ .....|||+.|
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~-~~~l~~-------------~~-----l~~P~~iavdp--------------------- 132 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQH-RQVLVW-------------KD-----LDSPRALALDP--------------------- 132 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTT-CEEEEC-------------SS-----CCCEEEEEEET---------------------
T ss_pred EEEEEECCCCEEEEEecCCCc-EEEEEe-------------CC-----CCCcccEEEcc---------------------
Confidence 899999999999999987543 222210 00 01234566654
Q ss_pred cCccccccccCCCceEEEeeCC-CCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEcC
Q psy11781 625 NGTNVDKTIRDDQRYMYFHSLS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 702 (1228)
Q Consensus 625 ~~~~~~i~is~d~r~LYf~~ls-s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~~ 702 (1228)
..+.|||+-.. ..+++++.. +++ ..+.+.+. ...+.|+++| .++.||+++.
T Consensus 133 -----------~~G~lY~tD~g~~~~I~r~~~----dG~----------~~~~l~~~--~~~P~GlalD~~~~~LY~aD~ 185 (628)
T 4a0p_A 133 -----------AEGFMYWTEWGGKPKIDRAAM----DGS----------ERTTLVPN--VGRANGLTIDYAKRRLYWTDL 185 (628)
T ss_dssp -----------TTTEEEEEECSSSCEEEEEET----TSC----------SCEEEECS--CSSEEEEEEETTTTEEEEEET
T ss_pred -----------CCCeEEEeCCCCCCEEEEEeC----CCC----------ceEEEECC--CCCcceEEEccccCEEEEEEC
Confidence 45689999865 456777653 322 11222222 2468999999 5799999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCccccc-cCCCCCccccEEEEEEecchhccC
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQYL-YGFLDFNVYNYRILVANSNDIKNN 781 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl~~~~-~~~~d~~e~nfrI~r~~v~~~i~~ 781 (1228)
..+.|.+.+.+ +. +..+++. .+..|.|++++. ++||+..-.-.... ..+. +..+..++...+.
T Consensus 186 ~~~~I~~~d~d-G~----~~~v~~~---~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~--tg~~~~~l~~~~~----- 249 (628)
T 4a0p_A 186 DTNLIESSNML-GL----NREVIAD---DLPHPFGLTQYQ-DYIYWTDWSRRSIERANKT--SGQNRTIIQGHLD----- 249 (628)
T ss_dssp TTTEEEEEETT-SC----SCEEEEE---CCSCEEEEEEET-TEEEEEETTTTEEEEEETT--TCCSCEEEECSCC-----
T ss_pred CCCEEEEEcCC-CC----ceEEeec---cCCCceEEEEEC-CEEEEecCCCCEEEEEECC--CCCceEEEecCCC-----
Confidence 99999999998 53 2245542 477899999985 68999874332211 0000 0111122221100
Q ss_pred CCCCCCCCCCCCCCCCCCCCcccCCCCCc-ccccCCCCCCCCCCccEEEEEEeeeeeecCChHHHHhhccCCCCccCCCc
Q psy11781 782 NQPPNTKSNAGPARPSTDQTKSFHPSVPS-IYPSVPSNAYPSSSHFQVVFRWKIMDFVFRDNKQKANLIRSNKFIPENNL 860 (1228)
Q Consensus 782 t~c~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~vy~Wk~ldf~fp~~~~r~~ai~~g~y~p~n~~ 860 (1228)
.|- ..+-||+..+. +-|--..|+ .++++=.. -| .|.|.= .-
T Consensus 250 -------------~p~--~i~v~~~~~q~~~n~C~~~ng--~C~~~C~~---------~~----------~~~~~C--~C 291 (628)
T 4a0p_A 250 -------------YVM--DILVFHSSRQSGWNECASSNG--HCSHLCLA---------VP----------VGGFVC--GC 291 (628)
T ss_dssp -------------SCC--EEEEECGGGSCCCCTTTTTGG--GCSSEEEE---------ET----------TTEEEE--EC
T ss_pred -------------Ccc--eeeeeeecccccceEeccCCC--Ccchhhhc---------CC----------CCCeeE--Ec
Confidence 000 11223322210 000000000 01111100 00 011110 01
Q ss_pred ccceEEe-CCe--------EEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeC-CCc
Q psy11781 861 PLGIGIW-RST--------IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDK-CDR 930 (1228)
Q Consensus 861 p~gv~v~-~gR--------iFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~-~gr 930 (1228)
|.|.... ++| ++++- | -.+..+..... .+|+... ...++.++.++..|. .++
T Consensus 292 ~~g~~l~~d~~~C~~~~~~Ll~s~-~------~~i~~i~l~~~-------~~~~~~l----~~~~~~~~~~ld~d~~~~~ 353 (628)
T 4a0p_A 292 PAHYSLNADNRTCSAPTTFLLFSQ-K------SAINRMVIDEQ-------QSPDIIL----PIHSLRNVRAIDYDPLDKQ 353 (628)
T ss_dssp STTCEECTTSSCEECCSSEEEEEE-T------TEEEEECCCTT-------CCCCEEC----CCTTCSCEEEEEEETTTTE
T ss_pred CCCcEecccCCcCccccceeeeec-c------ceEEEEecccc-------cCceEEE----EehhcCCceEEEEecCCCe
Confidence 2233221 221 22221 0 12222222100 0111000 014577788999997 589
Q ss_pred EEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcc--cCCCcceeeEEEeecCCCceEEEEEcCCCCeEEE
Q psy11781 931 LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV--FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIV 1008 (1228)
Q Consensus 931 LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~--~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIV 1008 (1228)
|++.|.+.- +|..+++....... +.. .... ..-.....|+||. ..+.+|+||++...|.|
T Consensus 354 iy~sD~~~~------------~I~r~~~~g~~~~~-v~~-~~~~~~~~~~~p~glAvD~----~~~nLY~td~~~~~I~v 415 (628)
T 4a0p_A 354 LYWIDSRQN------------MIRKAQEDGSQGFT-VVV-SSVPSQNLEIQPYDLSIDI----YSRYIYWTCEATNVINV 415 (628)
T ss_dssp EEEEETTTT------------EEEEEETTSCSCEE-EEC---------CCCEEEEEEET----TTTEEEEEETTTTEEEE
T ss_pred EEEEecCcc------------eEEEEEcCCCCceE-EEE-cccccccccCCcceEEeec----cCCeEEEEcCCCCEEEE
Confidence 999998743 67888886543221 111 1000 0112456799995 35789999999999999
Q ss_pred EECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCc
Q psy11781 1009 YDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQR 1088 (1228)
Q Consensus 1009 ydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r 1088 (1228)
+++. |+..+++.. .+ .+..-| |+++|...
T Consensus 416 ~~~~-G~~~~~l~~-------------~~-----l~~Pr~--------------------------------iavdp~~g 444 (628)
T 4a0p_A 416 TRLD-GRSVGVVLK-------------GE-----QDRPRA--------------------------------VVVNPEKG 444 (628)
T ss_dssp EETT-SCEEEEEEE-------------CT-----TCCEEE--------------------------------EEEETTTT
T ss_pred EECC-CCeEEEEEe-------------CC-----CCceee--------------------------------EEEecCCC
Confidence 9986 555554310 00 011113 45555667
Q ss_pred eEEEEeCCCC--ceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEecCCCeEEEEeCCCC
Q psy11781 1089 YMYFHSLSSN--RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVTKHSVGCWNTKTK 1165 (1228)
Q Consensus 1089 ~LYf~plss~--~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~~~~aI~~wn~~~~ 1165 (1228)
.|||+-.... ++++... |.+ ..+.+.+.. -..+.|+++| ..+.||+++...+.|.+.+.+ +
T Consensus 445 ~ly~tD~g~~~~~I~r~~~----dG~----------~~~~l~~~~-l~~P~gla~D~~~~~LYw~D~~~~~I~~~~~d-G 508 (628)
T 4a0p_A 445 YMYFTNLQERSPKIERAAL----DGT----------EREVLFFSG-LSKPIALALDSRLGKLFWADSDLRRIESSDLS-G 508 (628)
T ss_dssp EEEEEEEETTEEEEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEEETTTTEEEEEETT-S
T ss_pred eEEEeecCCCCCeEEEEeC----CCC----------CcEEEEecc-CCCccEEEEeCCCCEEEEEeCCCCEEEEEeCC-C
Confidence 8999866543 4555542 222 122233322 1357899999 568999999999999999998 6
Q ss_pred ccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCchh
Q psy11781 1166 VYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ 1205 (1228)
Q Consensus 1166 ~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~~ 1205 (1228)
. +..++.. ..+..|.||+++. ++||++....++
T Consensus 509 ~----~r~~~~~--~~~~~P~glav~~-~~ly~tD~~~~~ 541 (628)
T 4a0p_A 509 A----NRIVLED--SNILQPVGLTVFE-NWLYWIDKQQQM 541 (628)
T ss_dssp C----SCEEEEC--SSCSCEEEEEEET-TEEEEEETTTTE
T ss_pred C----ceEEEEc--CCCCCcEEEEEEC-CEEEEEECCCCe
Confidence 4 3455543 4688999999976 799999876654
No 8
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=99.45 E-value=2.6e-09 Score=131.94 Aligned_cols=169 Identities=15% Similarity=0.117 Sum_probs=105.6
Q ss_pred cEEEEEECCCCc----ccCCC-cceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEc
Q psy11781 962 TLIRKYILPTAQ----VFEGS-LFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILD 1036 (1228)
Q Consensus 962 ~lir~y~~p~~~----~~~~S-~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~ 1036 (1228)
..|+++.|.... ..+-. +-+-+.||+. +.++.+|++|.....|..+++.....-.+.. .
T Consensus 326 ~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d--~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~--------------~ 389 (619)
T 3s94_A 326 TDLRRISLDTPDFTDIVLQLEDIRHAIAIDYD--PVEGYIYWTDDEVRAIRRSFIDGSGSQFVVT--------------A 389 (619)
T ss_dssp SCEEEEESSSTTCCCEECCCSCCSSEEEEEEE--TTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------------S
T ss_pred cceEEEecCCCccceeEEeccccCccEEEEEE--cCCCeEEEEeCCCCeEEEEEcCCCccEEEEE--------------C
Confidence 356778884331 11212 2233455553 4578999999988888888876532222110 0
Q ss_pred CEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCC
Q psy11781 1037 NLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVN 1116 (1228)
Q Consensus 1037 G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~ 1116 (1228)
+ .....|||+ +..++.||++-....++..++. . .+
T Consensus 390 ~-----~~~p~GlAv--------------------------------D~~~~~lY~tD~~~~~I~v~~~---~-G~---- 424 (619)
T 3s94_A 390 Q-----IAHPDGIAV--------------------------------DWVARNLYWTDTGTDRIEVTRL---N-GT---- 424 (619)
T ss_dssp S-----CSCCCEEEE--------------------------------ETTTTEEEEEETTTTEEEEEET---T-SC----
T ss_pred C-----CCCcCceEE--------------------------------ecccCcEEEEeCCCCcEEEEeC---C-CC----
Confidence 1 012334444 4457889999877776655542 1 11
Q ss_pred ccccccceEEeccccCCCCcccEEEcC-CCcEEEEecCC-CeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeC-C
Q psy11781 1117 SSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNLVTK-HSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDP-N 1193 (1228)
Q Consensus 1117 ~~~~~~~v~~lG~rg~~sqs~g~~~D~-~G~LY~t~~~~-~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~-d 1193 (1228)
..+.+...+. .++.++++|. +|.||+++... ..|.+.+.+ +. +..++. ...|.||.||++|. +
T Consensus 425 ------~~~~l~~~~l-~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~d-G~----~~~~l~--~~~l~~P~GlalD~~~ 490 (619)
T 3s94_A 425 ------MRKILISEDL-EEPRAIVLDPMVGYMYWTDWGEIPKIERAALD-GS----DRVVLV--NTSLGWPNGLALDYDE 490 (619)
T ss_dssp ------SCEEEECTTC-CSEEEEEEETTTTEEEEEECSSSCEEEEEETT-SC----SCEEEE--CSSCSCEEEEEEETTT
T ss_pred ------eEEEEEECCC-CCeeeEEEEcCCCcEEEecCCCCCEEEEEccC-CC----ccEEEE--eCCCCCCeeeEEcccC
Confidence 1123333221 3578999994 69999999875 789999998 54 334444 34699999999996 6
Q ss_pred CcEEEEeCCchh
Q psy11781 1194 DNIWILSNKLHQ 1205 (1228)
Q Consensus 1194 g~Lyvlsn~l~~ 1205 (1228)
+.||+......+
T Consensus 491 ~~LY~aD~~~~~ 502 (619)
T 3s94_A 491 GKIYWGDAKTDK 502 (619)
T ss_dssp TEEEEEETTTTE
T ss_pred CEEEEEECCCCE
Confidence 799999866554
No 9
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.29 E-value=6e-09 Score=112.51 Aligned_cols=189 Identities=10% Similarity=0.187 Sum_probs=128.8
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeE
Q psy11781 466 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 545 (1228)
Q Consensus 466 ~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~ 545 (1228)
.+..+.++.+|++|+|||.+.+. .+|..||++ +++. .+.++.. ......|++| .++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~------------~~v~~~~~~-~~~~-~~~~~~~----~~~~~~i~~~-----~~g~ 74 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKA------------NKISSLDQS-GRIK-EFEVPTP----DAKVMCLIVS-----SLGD 74 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTT------------TEEEEECTT-SCEE-EEECSST----TCCEEEEEEC-----TTSC
T ss_pred CCCCcceeeECCCCCEEEEcCCC------------CeEEEECCC-CceE-EEECCCC----CCcceeEEEC-----CCCC
Confidence 35678899999999999999753 248999998 6654 4666532 2456788887 5678
Q ss_pred EEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccccc
Q psy11781 546 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 625 (1228)
Q Consensus 546 aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~ 625 (1228)
+|+++....+|.+||.. ++..++..+ .. + ..+.+|++++
T Consensus 75 l~v~~~~~~~v~~~d~~-g~~~~~~~~----~~--------~------~~~~~i~~~~---------------------- 113 (300)
T 2qc5_A 75 IWFTENGANKIGKLSKK-GGFTEYPLP----QP--------D------SGPYGITEGL---------------------- 113 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECS----ST--------T------CCEEEEEECS----------------------
T ss_pred EEEEecCCCeEEEECCC-CCeEEecCC----CC--------C------CCCccceECC----------------------
Confidence 99999988899999988 665443321 00 0 1234566654
Q ss_pred CccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCC
Q psy11781 626 GTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKH 705 (1228)
Q Consensus 626 ~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~ 705 (1228)
++ .||+....+..+++++.+ ..+ ..+. +... ...+.++++|.+|+||+++...+
T Consensus 114 ----------~g-~l~v~~~~~~~i~~~~~~----g~~--------~~~~-~~~~--~~~~~~i~~d~~g~l~v~~~~~~ 167 (300)
T 2qc5_A 114 ----------NG-DIWFTQLNGDRIGKLTAD----GTI--------YEYD-LPNK--GSYPAFITLGSDNALWFTENQNN 167 (300)
T ss_dssp ----------TT-CEEEEETTTTEEEEECTT----SCE--------EEEE-CSST--TCCEEEEEECTTSSEEEEETTTT
T ss_pred ----------CC-CEEEEccCCCeEEEECCC----CCE--------EEcc-CCCC--CCCceeEEECCCCCEEEEecCCC
Confidence 33 488887766678887642 111 0111 1111 23578899999999999999899
Q ss_pred eEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 706 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 706 aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
.|.++++. +.+. .+. ....+.+|.+++++++|.|||.+.
T Consensus 168 ~i~~~~~~-g~~~-----~~~-~~~~~~~~~~i~~d~~g~l~v~~~ 206 (300)
T 2qc5_A 168 SIGRITNT-GKLE-----EYP-LPTNAAAPVGITSGNDGALWFVEI 206 (300)
T ss_dssp EEEEECTT-CCEE-----EEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred eEEEECCC-CcEE-----Eee-CCCCCCCcceEEECCCCCEEEEcc
Confidence 99999986 5432 222 233456788999998889998764
No 10
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.27 E-value=8.7e-10 Score=125.68 Aligned_cols=283 Identities=10% Similarity=0.020 Sum_probs=183.3
Q ss_pred cCCCcccceEEe--CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEE---eCCCc
Q psy11781 856 PENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSV---DKCDR 930 (1228)
Q Consensus 856 p~n~~p~gv~v~--~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~i---D~~gr 930 (1228)
..+..|.+++.+ ++|++++- +.. .++..++... +.--.+ -+|...- +-+..+.+.++.+ |..||
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~--l~~---g~V~~~~~~~-~~~~~~-~~~~~s~----~g~~~~~~sGl~~~~~D~~gr 78 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSN--LYK---GRIEVYNPKT-QSHFNV-VIDGASS----NGDGEQQMSGLSLLTHDNSKR 78 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEE--TTT---TEEEEECTTT-CCEEEE-CCTTTCC----SSCCSEEEEEEEESSSSSCCE
T ss_pred CcccCCcCccCcCCCCEEEEEe--ccC---CEEEEEcCCC-CeEEEE-ecCCccc----cCCCcceeeEEEEeccCCCCc
Confidence 357789999987 59999997 443 3788887521 211112 3454221 0134577899999 78999
Q ss_pred EEE-EeCCCCCccccccccCCCEEEEEECC---CCcEEEEEECCCCccc--------CCCcceeeEEEeecCCCceEEEE
Q psy11781 931 LWI-MDTGVTNILSSIQQLCPPKIMVFDLK---TNTLIRKYILPTAQVF--------EGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 931 LWV-LDtG~~~~~~~~~~~~~pKLvvfDL~---td~lir~y~~p~~~~~--------~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
||| +|.|..-........+...|++|||+ |++++....|+. +.. .-...+|++|| .++.|||
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~-~~~~~~~~~g~~~~~~nDvavD-----~~GnaYV 152 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEK-VQDEFEKKAGKRPFGVVQSAQD-----RDGNSYV 152 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHH-HHHHHHHHHSSCCEEEEEEEEC-----TTSCEEE
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcc-ccccccccccccccCCceeEEC-----CCCCEEE
Confidence 999 78765322212233467899999999 999999999954 222 12468999999 5799999
Q ss_pred EcCCC-CeEEEEECCCCeE--EEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcccccccccccc
Q psy11781 999 NDVFR-YGLIVYDFFKNTS--YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 1075 (1228)
Q Consensus 999 tD~~~-~gLIVydl~~g~s--wRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~ 1075 (1228)
+|+.. ++|+.+|....+. |-... |... -.-|..||
T Consensus 153 t~s~~~~~I~rV~pdG~~~~~~~~~~------~~~~----------~~~G~nGI-------------------------- 190 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTVSTFAWES------GNGG----------QRPGYSGI-------------------------- 190 (334)
T ss_dssp EEEESSCEEEEECTTSCCEEEEEECC------CCSS----------SCCSCSEE--------------------------
T ss_pred eCCCCCCeEEEEeCCCCEEeeeeecC------CCcc----------cccCcceE--------------------------
Confidence 99999 8999888875421 21111 1000 01234444
Q ss_pred CccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEe--ccccCCCCcccE-EEcCCCcE-EEEe
Q psy11781 1076 GTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYL--GSRFRNTQASAS-AINSNGVM-FYNL 1151 (1228)
Q Consensus 1076 ~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~l--G~rg~~sqs~g~-~~D~~G~L-Y~t~ 1151 (1228)
+++|+++.|+-+-- +.+|++++.+ .+. . . .+..- |..+.-...+|| ....+|++ ++++
T Consensus 191 ------v~~pdg~~Liv~~~-~g~L~~fD~~---~pv---~---~--~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 191 ------TFDPHSNKLIAFGG-PRALTAFDVS---KPY---A---W--PEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp ------EEETTTTEEEEESS-SSSEEEEECS---SSS---C---C--CEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred ------EEeCCCCEEEEEcC-CCeEEEEcCC---CCc---c---e--eecccccCCcccccCcccccccccCCEEEEEEc
Confidence 45557888888876 7889999865 222 1 0 22222 432211236775 66777866 8988
Q ss_pred cCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEe------CCCcEEEEeCCchhhhcCCCCCCcccEEEEEEe
Q psy11781 1152 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKID------PNDNIWILSNKLHQYLYGFLDFNVYNYRILVAN 1224 (1228)
Q Consensus 1152 ~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id------~dg~Lyvlsn~l~~~~~~~~d~~e~nfrI~r~~ 1224 (1228)
-..+++...+.+ + +. ..+++..-+..++ +.+++++ .++.+|++...+..-..| +..-|.+.++.
T Consensus 253 ~~~~~~~l~S~D-g-W~--sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f~~~~~g----~r~~f~~~di~ 322 (334)
T 2p9w_A 253 RAPYAISFRSWD-N-WK--SANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFFDNGAHG----GRSDYPLYKLD 322 (334)
T ss_dssp ETTEEEEEECSS-T-TS--EEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCGGGTTTS----CCCCEEEEECC
T ss_pred CCCCEEEEECCC-C-cc--eeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeeecCCcccC----Ccceeechhhh
Confidence 877777777777 6 54 5676766565666 8999887 667899999988754444 23337776653
No 11
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=99.24 E-value=1.3e-09 Score=124.27 Aligned_cols=283 Identities=10% Similarity=0.023 Sum_probs=186.4
Q ss_pred cCCCcccceEEe--CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEE---eCCCc
Q psy11781 406 PENNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSV---DKCDR 480 (1228)
Q Consensus 406 p~n~~P~gv~v~--~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~i---D~~gR 480 (1228)
..+..|.+++.+ ++|++++- +.. .++..++.... .-...-+|+..- +-+..+.+.++.+ |+.||
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~--l~~---g~V~~~~~~~~--~~~~~~~~~~s~----~g~~~~~~sGl~~~~~D~~gr 78 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSN--LYK---GRIEVYNPKTQ--SHFNVVIDGASS----NGDGEQQMSGLSLLTHDNSKR 78 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEE--TTT---TEEEEECTTTC--CEEEECCTTTCC----SSCCSEEEEEEEESSSSSCCE
T ss_pred CcccCCcCccCcCCCCEEEEEe--ccC---CEEEEEcCCCC--eEEEEecCCccc----cCCCcceeeEEEEeccCCCCc
Confidence 457789999997 49999997 443 36888875311 111113444221 1234577899999 78999
Q ss_pred EEE-EeCCCCCcccCcCccCCCEEEEEECC---CCcEEEEEECCCcccc--------cCCCceeEEEEeecCCCCeEEEE
Q psy11781 481 LWI-MDTGVTNILSSIQQLCPPKIMVFDLK---TNTLIRKYILPTAQVF--------EGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 481 LWV-LDtG~~~~~~~~~~~~~PKLvvfDL~---td~vi~~y~~p~~v~~--------~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
||| +|.|..-........+...|++|||+ |++++....|+. +.. .-...+||+|| .++.+||
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~-~~~~~~~~~g~~~~~~nDvavD-----~~GnaYV 152 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEK-VQDEFEKKAGKRPFGVVQSAQD-----RDGNSYV 152 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHH-HHHHHHHHHSSCCEEEEEEEEC-----TTSCEEE
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCcc-ccccccccccccccCCceeEEC-----CCCCEEE
Confidence 998 78765322211223467899999999 999999999854 222 12458999999 6899999
Q ss_pred ecCCC-CeEEEEEcCCCe--EEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccccc
Q psy11781 549 NDVFR-YGLIVYDFFKNT--SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 625 (1228)
Q Consensus 549 tDs~~-~gLIVyDl~~g~--swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~ 625 (1228)
+|+.. ++|+.+|..... .|-... |.. .-..|..|||..|
T Consensus 153 t~s~~~~~I~rV~pdG~~~~~~~~~~------~~~----------~~~~G~nGIv~~p---------------------- 194 (334)
T 2p9w_A 153 AFALGMPAIARVSADGKTVSTFAWES------GNG----------GQRPGYSGITFDP---------------------- 194 (334)
T ss_dssp EEEESSCEEEEECTTSCCEEEEEECC------CCS----------SSCCSCSEEEEET----------------------
T ss_pred eCCCCCCeEEEEeCCCCEEeeeeecC------CCc----------ccccCcceEEEeC----------------------
Confidence 99998 899888887642 232211 111 0124677888866
Q ss_pred CccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEee--ccccccccccce-EEccCCcE-EEEc
Q psy11781 626 GTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYL--GSRFRNTQASAS-AINSNGVM-FYNL 701 (1228)
Q Consensus 626 ~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~l--G~~g~~~qs~G~-a~D~~G~L-Y~t~ 701 (1228)
+++.|+-+-- +.+|++++.+ .+. . ..+..- |..+...-.+|+ +...+|++ ++++
T Consensus 195 ----------dg~~Liv~~~-~g~L~~fD~~---~pv---~-----~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 195 ----------HSNKLIAFGG-PRALTAFDVS---KPY---A-----WPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp ----------TTTEEEEESS-SSSEEEEECS---SSS---C-----CCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred ----------CCCEEEEEcC-CCeEEEEcCC---CCc---c-----eeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 6778888877 7789999865 211 1 022221 322222346785 66778877 8888
Q ss_pred CCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEc------CCCcEEEEecCccccccCCCCCccccEEEEEEe
Q psy11781 702 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKID------PNDNIWILSNKLHQYLYGFLDFNVYNYRILVAN 774 (1228)
Q Consensus 702 ~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id------~dg~LyVlsnrl~~~~~~~~d~~e~nfrI~r~~ 774 (1228)
-..+++.....+ + +. +.+++...+..++ +.+++++ .++.||+++..+..-. ..+..-|.+.++.
T Consensus 253 ~~~~~~~l~S~D-g-W~--sa~~~g~~~~~~~-~~g~tt~t~~~~~~~~~iYvv~~~f~~~~----~g~r~~f~~~di~ 322 (334)
T 2p9w_A 253 RAPYAISFRSWD-N-WK--SANIKKTKRSELQ-NSGFTAVADYYQGSEQGLYAVSAFFDNGA----HGGRSDYPLYKLD 322 (334)
T ss_dssp ETTEEEEEECSS-T-TS--EEEEEEEECGGGG-SSCEEEEEEEEETTEEEEEEEECCGGGTT----TSCCCCEEEEECC
T ss_pred CCCCEEEEECCC-C-cc--eeEEeeeecCccc-cCceeEEEEeccccCCeEEEEeeecCCcc----cCCcceeechhhh
Confidence 777777777776 5 64 4566666666666 8899887 5678999999887444 3334558887765
No 12
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.18 E-value=1.3e-08 Score=113.37 Aligned_cols=261 Identities=10% Similarity=0.061 Sum_probs=165.1
Q ss_pred CcccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 409 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 487 (1228)
Q Consensus 409 ~~P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG 487 (1228)
..|.|+++. +|++|++-.. . -+|..++.. +.+.. .|.. . -.+.++.+|++|+|||.|.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~--~---~~I~~~d~~-----g~~~~----~~~~---~---~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE--V---GEIVSITPD-----GNQQI----HATV---E---GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---TEEEEECTT-----CCEEE----EEEC---S---SEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCC--C---CeEEEECCC-----CceEE----EEeC---C---CCceeEEEcCCCcEEEEecc
Confidence 478999996 7899998521 1 246666542 11111 0110 0 25889999999999999976
Q ss_pred CCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCe--
Q psy11781 488 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-- 565 (1228)
Q Consensus 488 ~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~-- 565 (1228)
.- .-+|+.||..++++.....++. ..+.+.++++ .++.+|++|...+.|.++|..+++
T Consensus 92 ~~----------~~~v~~~d~~~g~~~~~~~~~~-----~~~~~g~~~~-----~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 92 AD----------SIPVVSLVKSDGTVETLLTLPD-----AIFLNGITPL-----SDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp TT----------SCEEEEEECTTSCEEEEEECTT-----CSCEEEEEES-----SSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CC----------cceEEEEcCCCCeEEEEEeCCC-----ccccCccccc-----CCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 42 1359999999999876666643 2345566653 467899999988899999988753
Q ss_pred EEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeC
Q psy11781 566 SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSL 645 (1228)
Q Consensus 566 swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~l 645 (1228)
.|+.. ....+.. ..+ .+ .+..|| ++++++||+.-.
T Consensus 152 v~~~~-~~~~~~~------~~~-~~---~~pngi----------------------------------s~dg~~lyv~d~ 186 (306)
T 2p4o_A 152 IWLEH-PMLARSN------SES-VF---PAANGL----------------------------------KRFGNFLYVSNT 186 (306)
T ss_dssp EEEEC-GGGSCSS------TTC-CS---CSEEEE----------------------------------EEETTEEEEEET
T ss_pred EEEEC-Ccccccc------ccC-CC---CcCCCc----------------------------------CcCCCEEEEEeC
Confidence 33322 1110000 000 00 012222 347889999999
Q ss_pred CCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEE
Q psy11781 646 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIV 725 (1228)
Q Consensus 646 ss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV 725 (1228)
...++++++.+- +..+ . ..+.+.+. ..++|+++|++|+||+++...+.|.+++++ +.+ ..+
T Consensus 187 ~~~~I~~~~~~~--~g~~--~------~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~-----~~~ 247 (306)
T 2p4o_A 187 EKMLLLRIPVDS--TDKP--G------EPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RST-----TII 247 (306)
T ss_dssp TTTEEEEEEBCT--TSCB--C------CCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCE-----EEE
T ss_pred CCCEEEEEEeCC--CCCC--C------ccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCE-----EEE
Confidence 998999998642 1221 1 11222221 248999999999999999999999999997 532 223
Q ss_pred EecCCceecCCceEEc---CC-CcEEEEecCccccccCCCCCccccEEEEEEecc
Q psy11781 726 QTSRDILNFPNDLKID---PN-DNIWILSNKLHQYLYGFLDFNVYNYRILVANSN 776 (1228)
Q Consensus 726 ~~~d~~L~wPd~l~Id---~d-g~LyVlsnrl~~~~~~~~d~~e~nfrI~r~~v~ 776 (1228)
..-...+.+|.+++++ ++ +.|||++++- .. .........-.|+++++.
T Consensus 248 ~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~-~~--~~~~~~~~~g~v~~i~~~ 299 (306)
T 2p4o_A 248 AQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGG-MF--LPPPTGVVPANVVRLEVG 299 (306)
T ss_dssp ECGGGTCTTEEEEEECCSTTTTTEEEEEECTT-SS--SCCTTCCCCEEEEEEECS
T ss_pred eecccccCCceEEEEecccCCCCEEEEECCCC-cc--cCCCcccccceEEEEecC
Confidence 2222246889999998 56 5799999752 11 111222335679998863
No 13
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=99.17 E-value=1.7e-08 Score=112.48 Aligned_cols=260 Identities=10% Similarity=0.069 Sum_probs=164.7
Q ss_pred CcccceEEe-CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 859 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 937 (1228)
Q Consensus 859 ~~p~gv~v~-~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDtG 937 (1228)
..|.|+++. +|++|++-.. .-+|..++. .+. +.. .|... -.+.++.+|++|+|||.|.+
T Consensus 32 ~~pegia~~~~g~lyv~d~~-----~~~I~~~d~--~g~---~~~----~~~~~------~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE-----VGEIVSITP--DGN---QQI----HATVE------GKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT-----TTEEEEECT--TCC---EEE----EEECS------SEEEEEEECTTSCEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCC-----CCeEEEECC--CCc---eEE----EEeCC------CCceeEEEcCCCcEEEEecc
Confidence 478899996 7899998521 125666653 221 111 01101 15889999999999999976
Q ss_pred CCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCe--
Q psy11781 938 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-- 1015 (1228)
Q Consensus 938 ~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~-- 1015 (1228)
.-. -+|+.||..++++.....++. ..+.+.++++ .++.+|++|...+.|.++|..+++
T Consensus 92 ~~~----------~~v~~~d~~~g~~~~~~~~~~-----~~~~~g~~~~-----~~~~~~v~d~~~g~i~~~d~~~~~~~ 151 (306)
T 2p4o_A 92 ADS----------IPVVSLVKSDGTVETLLTLPD-----AIFLNGITPL-----SDTQYLTADSYRGAIWLIDVVQPSGS 151 (306)
T ss_dssp TTS----------CEEEEEECTTSCEEEEEECTT-----CSCEEEEEES-----SSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCc----------ceEEEEcCCCCeEEEEEeCCC-----ccccCccccc-----CCCcEEEEECCCCeEEEEeCCCCcEe
Confidence 421 279999999999876666643 2344455543 357899999988899999988763
Q ss_pred EEEeecCCcCc-CCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEe
Q psy11781 1016 SYRLTHPYMYP-EPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 1094 (1228)
Q Consensus 1016 swRv~h~s~~p-dP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~p 1094 (1228)
.|+. +..+.+ .+ . .+. ...+ .|++++++||+.-
T Consensus 152 v~~~-~~~~~~~~~-------~-------~~~------------------------------~~pn-gis~dg~~lyv~d 185 (306)
T 2p4o_A 152 IWLE-HPMLARSNS-------E-------SVF------------------------------PAAN-GLKRFGNFLYVSN 185 (306)
T ss_dssp EEEE-CGGGSCSST-------T-------CCS------------------------------CSEE-EEEEETTEEEEEE
T ss_pred EEEE-CCccccccc-------c-------CCC------------------------------CcCC-CcCcCCCEEEEEe
Confidence 3332 111100 00 0 000 0001 1266889999999
Q ss_pred CCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeE
Q psy11781 1095 LSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDI 1174 (1228)
Q Consensus 1095 lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~ 1174 (1228)
....++++++.+- +..+ . ..+.+.+. ..++|+++|++|+||+++...++|.+++++ +.+. .
T Consensus 186 ~~~~~I~~~~~~~--~g~~--~------~~~~~~~~---~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~-----~ 246 (306)
T 2p4o_A 186 TEKMLLLRIPVDS--TDKP--G------EPEIFVEQ---TNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTT-----I 246 (306)
T ss_dssp TTTTEEEEEEBCT--TSCB--C------CCEEEEES---CCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEE-----E
T ss_pred CCCCEEEEEEeCC--CCCC--C------ccEEEecc---CCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEE-----E
Confidence 9999999998642 1221 1 11222221 247999999999999999999999999998 5431 2
Q ss_pred EEecCCceecCCceEEe---CC-CcEEEEeCCchhhhcCCCCCCcccEEEEEEecC
Q psy11781 1175 VQTSRDILNFPNDLKID---PN-DNIWILSNKLHQYLYGFLDFNVYNYRILVANSN 1226 (1228)
Q Consensus 1175 v~~~~~~L~wPd~l~id---~d-g~Lyvlsn~l~~~~~~~~d~~e~nfrI~r~~v~ 1226 (1228)
+..-...+.+|.+++++ ++ +.|||++++-. . .........-.|+++++.
T Consensus 247 ~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~~~-~--~~~~~~~~~g~v~~i~~~ 299 (306)
T 2p4o_A 247 IAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNGGM-F--LPPPTGVVPANVVRLEVG 299 (306)
T ss_dssp EECGGGTCTTEEEEEECCSTTTTTEEEEEECTTS-S--SCCTTCCCCEEEEEEECS
T ss_pred EeecccccCCceEEEEecccCCCCEEEEECCCCc-c--cCCCcccccceEEEEecC
Confidence 32222246899999998 56 58999997521 1 111122334568888764
No 14
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.09 E-value=1.9e-07 Score=100.56 Aligned_cols=188 Identities=12% Similarity=0.228 Sum_probs=126.1
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEE
Q psy11781 467 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 546 (1228)
Q Consensus 467 lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~a 546 (1228)
+..+.++.+|++|+|||.+.+. ..|..||+. +++ ..+.++. .......|++| .++.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~------------~~v~~~d~~-~~~-~~~~~~~----~~~~~~~i~~~-----~~g~l 70 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKA------------NMISCINLD-GKI-TEYPLPT----PDAKVMCLTIS-----SDGEV 70 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTT------------TEEEEECTT-CCE-EEEECSS----TTCCEEEEEEC-----TTSCE
T ss_pred CCCccceEECCCCCEEEEecCC------------CcEEEEcCC-CCe-EEecCCc----ccCceeeEEEC-----CCCCE
Confidence 4678999999999999998753 249999998 654 4566653 23557788887 46789
Q ss_pred EEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccC
Q psy11781 547 YVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNG 626 (1228)
Q Consensus 547 YItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~ 626 (1228)
|+++....+|.+||.. ++..++..+ .+ ...+.+|++++
T Consensus 71 ~v~~~~~~~i~~~~~~-g~~~~~~~~----~~--------------~~~~~~i~~~~----------------------- 108 (299)
T 2z2n_A 71 WFTENAANKIGRITKK-GIIKEYTLP----NP--------------DSAPYGITEGP----------------------- 108 (299)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECS----ST--------------TCCEEEEEECT-----------------------
T ss_pred EEeCCCCCeEEEECCC-CcEEEEeCC----Cc--------------CCCceeeEECC-----------------------
Confidence 9999888899999986 444333211 00 01234566654
Q ss_pred ccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCe
Q psy11781 627 TNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHS 706 (1228)
Q Consensus 627 ~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~a 706 (1228)
++ .||+....+..+++++. +..+ ..+.. ... .....++++|++|.||++....+.
T Consensus 109 ---------~g-~l~v~~~~~~~i~~~d~----~g~~--------~~~~~-~~~--~~~~~~i~~~~~g~l~v~~~~~~~ 163 (299)
T 2z2n_A 109 ---------NG-DIWFTEMNGNRIGRITD----DGKI--------REYEL-PNK--GSYPSFITLGSDNALWFTENQNNA 163 (299)
T ss_dssp ---------TS-CEEEEETTTTEEEEECT----TCCE--------EEEEC-SST--TCCEEEEEECTTSCEEEEETTTTE
T ss_pred ---------CC-CEEEEecCCceEEEECC----CCCE--------EEecC-CCC--CCCCceEEEcCCCCEEEEeCCCCE
Confidence 33 48887766667887753 2221 01110 111 134689999999999999998899
Q ss_pred EEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 707 VGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 707 I~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
|.+|++. +.+. .+. ....+..|.+++++++|.|||.+.
T Consensus 164 i~~~~~~-g~~~-----~~~-~~~~~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 164 IGRITES-GDIT-----EFK-IPTPASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp EEEECTT-CCEE-----EEE-CSSTTCCEEEEEECTTSSEEEEET
T ss_pred EEEEcCC-CcEE-----Eee-CCCCCCcceeEEECCCCCEEEEcc
Confidence 9999985 5432 221 123356788999999999999764
No 15
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=99.06 E-value=5.1e-09 Score=123.86 Aligned_cols=246 Identities=9% Similarity=0.040 Sum_probs=155.6
Q ss_pred cccceEEe----CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 410 LPLGIGIW----RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 485 (1228)
Q Consensus 410 ~P~gv~v~----~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLD 485 (1228)
-|.||+++ +|+||++=.. -.|..++... +.+...- ..+..+.++.+|..|+|||.|
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~~----g~v~~~~----------~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR------DAFRHVDFVN----QYVDIKT----------TNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT------SCEEEEETTT----TEEEEEC----------CCCSCEEEEEECTTCCEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCC------CCEEEEECCC----CEEEEee----------cCCCCccEEEECCCCCEEEEc
Confidence 59999998 3999999754 3577777521 2333221 146679999999999999999
Q ss_pred CCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCe
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 565 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~ 565 (1228)
.+... .+-.++.++...+... ...+ ......+++++|. .++.+|++|.....|.++|..+++
T Consensus 200 ~~~~~--------~~~gv~~~~~~~~~~~-~~~~-----~~~~~P~giavd~----~~G~lyv~d~~~~~V~~~d~~~g~ 261 (433)
T 4hw6_A 200 DQSSD--------TNTGIYLFTRASGFTE-RLSL-----CNARGAKTCAVHP----QNGKIYYTRYHHAMISSYDPATGT 261 (433)
T ss_dssp CCSCT--------TSEEEEEECGGGTTCC-EEEE-----EECSSBCCCEECT----TTCCEEECBTTCSEEEEECTTTCC
T ss_pred CCCCc--------ccceEEEEECCCCeec-cccc-----cccCCCCEEEEeC----CCCeEEEEECCCCEEEEEECCCCe
Confidence 87421 1123666665433211 1111 1235577899982 378999999999899999998776
Q ss_pred E-EEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEee
Q psy11781 566 S-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 644 (1228)
Q Consensus 566 s-wRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~ 644 (1228)
. ..+... .+. ...+|||++| ++++||+.-
T Consensus 262 ~~~~~~~~-------------~~~-----~~~~~ia~dp--------------------------------dG~~LYvad 291 (433)
T 4hw6_A 262 LTEEEVMM-------------DTK-----GSNFHIVWHP--------------------------------TGDWAYIIY 291 (433)
T ss_dssp EEEEEEEC-------------SCC-----SSCEEEEECT--------------------------------TSSEEEEEE
T ss_pred EEEEEecc-------------CCC-----CCcccEEEeC--------------------------------CCCEEEEEe
Confidence 6 333210 000 0013566655 678999999
Q ss_pred CCCCceEEEechhhcCCCCCCCcccccc-----ce-EeeccccccccccceEE---------ccCCcEEEEcCCCCeEEE
Q psy11781 645 LSSNRHYYVSTTDLRNSSRYVNSSDIDE-----YF-HYLGSRFRNTQASASAI---------NSNGVMFYNLVTKHSVGC 709 (1228)
Q Consensus 645 lss~~ly~V~T~~Lr~~~~~~~~~~~~~-----~v-~~lG~~g~~~qs~G~a~---------D~~G~LY~t~~~~~aI~~ 709 (1228)
....++++++.... ...+ ........ .+ .-.+.......+.|+++ |.+|+||+++...++|.+
T Consensus 292 ~~~~~I~~~~~d~~-~~~~-~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~ 369 (433)
T 4hw6_A 292 NGKHCIYRVDYNRE-TGKL-AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRV 369 (433)
T ss_dssp TTTTEEEEEEBCTT-TCCB-CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEE
T ss_pred CCCCEEEEEeCCCC-Cccc-CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEE
Confidence 99888999874211 0110 00000000 00 00011112345788999 999999999999999999
Q ss_pred EeCCCCccCCCCeeEEEec---------------CCceecCCceEEc-CCCcEEEEec
Q psy11781 710 WNTKTKVYLPQTQDIVQTS---------------RDILNFPNDLKID-PNDNIWILSN 751 (1228)
Q Consensus 710 wn~~~~~~~~~n~~iV~~~---------------d~~L~wPd~l~Id-~dg~LyVlsn 751 (1228)
++++ +.. ..++.. ..+|.+|.+|+++ .+|.|||...
T Consensus 370 ~~~~-G~v-----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 370 LTPE-GRV-----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp ECTT-SEE-----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ECCC-CCE-----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 9987 532 333311 2258999999999 8999999874
No 16
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.99 E-value=7.5e-09 Score=115.78 Aligned_cols=239 Identities=10% Similarity=0.077 Sum_probs=147.7
Q ss_pred CcccceEEe-CCe-EEEEcccCCCCCCcEEEEEECCCCCCCCcccCCC--CcCcCCCCCCC---------cceEEEEEEE
Q psy11781 409 NLPLGIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYP--NWSYFDDSNCN---------SLISVFRMSV 475 (1228)
Q Consensus 409 ~~P~gv~v~-~gR-iFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP--~~~wn~~~~c~---------~lvsV~~v~i 475 (1228)
..|.|++++ +|+ +|+.... -.|..++.. ...++.|. ...++. ..|+ .+-.+.++.+
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~------~~i~~~~~~----~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~p~gi~~ 87 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQD------GRVIKYEGP----NSGFVDFAYASPYWNK-AFCENSTDAEKRPLCGRTYDISY 87 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTT------SEEEEECCT----TTCEEEEEESCTTCCH-HHHTTCCCGGGHHHHCCEEEEEE
T ss_pred CCceEEEEcCCCCEEEEEcCC------CeEEEECCC----CCceEEEecccccccc-cccccccchhccccCCCCceEEE
Confidence 358899986 577 8887632 235555432 12233221 111110 0111 2346899999
Q ss_pred eC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCC-CeEEEEecCCC
Q psy11781 476 DK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCD-HVFAYVNDVFR 553 (1228)
Q Consensus 476 D~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~-~~~aYItDs~~ 553 (1228)
|+ .|+|||.|.+. .|+.||+.++++. .+.-... -.+..+.++|++| . ++.+||+|...
T Consensus 88 ~~~~g~l~v~d~~~-------------~i~~~d~~~g~~~-~~~~~~~-~~~~~~p~~i~~d-----~~~G~l~v~d~~~ 147 (322)
T 2fp8_A 88 NLQNNQLYIVDCYY-------------HLSVVGSEGGHAT-QLATSVD-GVPFKWLYAVTVD-----QRTGIVYFTDVST 147 (322)
T ss_dssp ETTTTEEEEEETTT-------------EEEEECTTCEECE-EEESEET-TEECSCEEEEEEC-----TTTCCEEEEESCS
T ss_pred cCCCCcEEEEECCC-------------CEEEEeCCCCEEE-EecccCC-CCcccccceEEEe-----cCCCEEEEECCcc
Confidence 96 89999999872 2889998876532 2211000 0123567899998 5 68899999762
Q ss_pred -----------------CeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccc
Q psy11781 554 -----------------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEY 616 (1228)
Q Consensus 554 -----------------~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~ 616 (1228)
.+|++||..+++...+.. .+ ....|||+++
T Consensus 148 ~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~---~~p~gia~~~------------- 194 (322)
T 2fp8_A 148 LYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------EL---HVPGGAEVSA------------- 194 (322)
T ss_dssp SCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EE---SCCCEEEECT-------------
T ss_pred cccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CC---ccCcceEECC-------------
Confidence 568888877765433210 01 1244666655
Q ss_pred cccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc
Q psy11781 617 YHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV 696 (1228)
Q Consensus 617 ~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~ 696 (1228)
++++||+......+++++..+- ... ...+.+.+.. + ++|+++|++|+
T Consensus 195 -------------------dg~~lyv~d~~~~~I~~~~~~~---~~~--------~~~~~~~~~~--g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 195 -------------------DSSFVLVAEFLSHQIVKYWLEG---PKK--------GTAEVLVKIP--N-PGNIKRNADGH 241 (322)
T ss_dssp -------------------TSSEEEEEEGGGTEEEEEESSS---TTT--------TCEEEEEECS--S-EEEEEECTTSC
T ss_pred -------------------CCCEEEEEeCCCCeEEEEECCC---CcC--------CccceEEeCC--C-CCCeEECCCCC
Confidence 6789999988877888887431 110 1112222221 3 79999999999
Q ss_pred EEEEcCC----------CCeEEEEeCCCCccCCCCeeEEEecCCc-eecCCceEEcCCCcEEEEe
Q psy11781 697 MFYNLVT----------KHSVGCWNTKTKVYLPQTQDIVQTSRDI-LNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 697 LY~t~~~----------~~aI~~wn~~~~~~~~~n~~iV~~~d~~-L~wPd~l~Id~dg~LyVls 750 (1228)
||++... .+.|.+++++ +.. +..+...+.. +.+|+++.. .+|+|||.+
T Consensus 242 l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~----~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~ 300 (322)
T 2fp8_A 242 FWVSSSEELDGNMHGRVDPKGIKFDEF-GNI----LEVIPLPPPFAGEHFEQIQE-HDGLLYIGT 300 (322)
T ss_dssp EEEEEEEETTSSTTSCEEEEEEEECTT-SCE----EEEEECCTTTTTSCCCEEEE-ETTEEEEEC
T ss_pred EEEEecCcccccccCCCccEEEEECCC-CCE----EEEEECCCCCccccceEEEE-eCCEEEEee
Confidence 9999876 5789999998 532 3444422222 688999887 478999986
No 17
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.98 E-value=2.7e-08 Score=117.63 Aligned_cols=240 Identities=9% Similarity=0.025 Sum_probs=153.4
Q ss_pred cccceEEe----CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 860 LPLGIGIW----RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 935 (1228)
Q Consensus 860 ~p~gv~v~----~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLD 935 (1228)
-|.||++. +|+||++=.. -.|-.++.. .+ .+...- ..+.++.++.+|..|+|||.|
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~------~~I~~id~~-~g---~v~~~~----------~~~~~P~giavd~dG~lyVad 199 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQR------DAFRHVDFV-NQ---YVDIKT----------TNIGQCADVNFTLNGDMVVVD 199 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBT------SCEEEEETT-TT---EEEEEC----------CCCSCEEEEEECTTCCEEEEE
T ss_pred CCceEEEccccCCCEEEEEeCC------CCEEEEECC-CC---EEEEee----------cCCCCccEEEECCCCCEEEEc
Confidence 48999997 3999999754 356667642 12 232221 146678999999999999999
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCe
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 1015 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~ 1015 (1228)
.+... .+-.++.++...+... ...++ .....+.+++|. .++.+|++|.....|.++|.++++
T Consensus 200 ~~~~~--------~~~gv~~~~~~~~~~~-~~~~~-----~~~~P~giavd~----~~G~lyv~d~~~~~V~~~d~~~g~ 261 (433)
T 4hw6_A 200 DQSSD--------TNTGIYLFTRASGFTE-RLSLC-----NARGAKTCAVHP----QNGKIYYTRYHHAMISSYDPATGT 261 (433)
T ss_dssp CCSCT--------TSEEEEEECGGGTTCC-EEEEE-----ECSSBCCCEECT----TTCCEEECBTTCSEEEEECTTTCC
T ss_pred CCCCc--------ccceEEEEECCCCeec-ccccc-----ccCCCCEEEEeC----CCCeEEEEECCCCEEEEEECCCCe
Confidence 87521 1124666665443221 11121 234567788883 278999999999999999998776
Q ss_pred E-EEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEe
Q psy11781 1016 S-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 1094 (1228)
Q Consensus 1016 s-wRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~p 1094 (1228)
. ..+.. ..+ ....++ |+++|++++||+.-
T Consensus 262 ~~~~~~~-------------~~~-----~~~~~~--------------------------------ia~dpdG~~LYvad 291 (433)
T 4hw6_A 262 LTEEEVM-------------MDT-----KGSNFH--------------------------------IVWHPTGDWAYIIY 291 (433)
T ss_dssp EEEEEEE-------------CSC-----CSSCEE--------------------------------EEECTTSSEEEEEE
T ss_pred EEEEEec-------------cCC-----CCCccc--------------------------------EEEeCCCCEEEEEe
Confidence 5 33210 000 000012 45666889999999
Q ss_pred CCCCceEEEecchhcCCcccCCccccccceEEecc---cc---------CCCCcccEEE---------cCCCcEEEEecC
Q psy11781 1095 LSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS---RF---------RNTQASASAI---------NSNGVMFYNLVT 1153 (1228)
Q Consensus 1095 lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~---rg---------~~sqs~g~~~---------D~~G~LY~t~~~ 1153 (1228)
....++++++...-. ..+ .......|. .| .-..+.|+++ |.+|+||+++..
T Consensus 292 ~~~~~I~~~~~d~~~-~~~-------~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~ 363 (433)
T 4hw6_A 292 NGKHCIYRVDYNRET-GKL-------AVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRD 363 (433)
T ss_dssp TTTTEEEEEEBCTTT-CCB-------CCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETT
T ss_pred CCCCEEEEEeCCCCC-ccc-------CcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECC
Confidence 999999998732110 000 000111111 11 1134678999 999999999999
Q ss_pred CCeEEEEeCCCCccccCCeeEEEec---------------CCceecCCceEEe-CCCcEEEEeC
Q psy11781 1154 KHSVGCWNTKTKVYLPQTQDIVQTS---------------RDILNFPNDLKID-PNDNIWILSN 1201 (1228)
Q Consensus 1154 ~~aI~~wn~~~~~~~~~n~~~v~~~---------------~~~L~wPd~l~id-~dg~Lyvlsn 1201 (1228)
+++|.+++++ +.. ..++-. ..+|.+|.+|++| .+|+|||...
T Consensus 364 n~~I~~~~~~-G~v-----~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 421 (433)
T 4hw6_A 364 SHTVRVLTPE-GRV-----TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDC 421 (433)
T ss_dssp TTEEEEECTT-SEE-----EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred CCEEEEECCC-CCE-----EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeC
Confidence 9999999987 643 233321 2358999999999 8999999763
No 18
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.98 E-value=2.4e-08 Score=108.43 Aligned_cols=198 Identities=14% Similarity=0.172 Sum_probs=131.5
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 465 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 465 ~~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
..|.++.++.+|+.|+|||.|++. -+|.+||++ ++.++++..+............|+++- .++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~------------~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~----~~g 89 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNN------------HRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR----NSG 89 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGG------------TEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET----TTT
T ss_pred CccCCCceEEECCCCCEEEEECCC------------CEEEEECCC-CcEEEEecccCCCcccccCceEEEEEc----CCC
Confidence 468889999999999999999763 249999987 677766543221111123456788851 478
Q ss_pred EEEEecCC-CCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccc
Q psy11781 545 FAYVNDVF-RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHH 623 (1228)
Q Consensus 545 ~aYItDs~-~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~ 623 (1228)
.+|++|.+ ...|.+||......+++... . ...+.+|++++
T Consensus 90 ~l~v~~~~~~~~i~~~d~~g~~~~~~~~~---------~----------~~~~~~i~~~~-------------------- 130 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYNQYGQFVRKFGAT---------I----------LQHPRGVTVDN-------------------- 130 (286)
T ss_dssp EEEEEECGGGCEEEEECTTSCEEEEECTT---------T----------CSCEEEEEECT--------------------
T ss_pred eEEEEcCCCCCEEEEECCCCcEEEEecCc---------c----------CCCceEEEEeC--------------------
Confidence 99999975 78899999443333332210 0 01234566654
Q ss_pred ccCccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCC
Q psy11781 624 YNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVT 703 (1228)
Q Consensus 624 ~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~ 703 (1228)
+++ ||+.......++.++. +.. .+..++..+....+.++++|.+|+||+++..
T Consensus 131 ------------~g~-l~v~~~~~~~i~~~~~----~g~----------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 183 (286)
T 1q7f_A 131 ------------KGR-IIVVECKVMRVIIFDQ----NGN----------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNR 183 (286)
T ss_dssp ------------TSC-EEEEETTTTEEEEECT----TSC----------EEEEEECTTTCSSEEEEEECSSSEEEEEEGG
T ss_pred ------------CCC-EEEEECCCCEEEEEcC----CCC----------EEEEeCCCCccCCcEEEEECCCCCEEEEECC
Confidence 454 8888776666777652 111 1222332222235789999999999999999
Q ss_pred CCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 704 KHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 704 ~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
.+.|.+|++. +.+ +..+. ....+.+|.+++++++|+|||...
T Consensus 184 ~~~i~~~~~~-g~~----~~~~~-~~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 184 AHCVKVFNYE-GQY----LRQIG-GEGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp GTEEEEEETT-CCE----EEEES-CTTTSCSEEEEEECTTCCEEEEEC
T ss_pred CCEEEEEcCC-CCE----EEEEc-cCCccCCCcEEEECCCCCEEEEeC
Confidence 9999999997 432 23332 233468899999999999999874
No 19
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=98.94 E-value=5e-08 Score=105.95 Aligned_cols=197 Identities=15% Similarity=0.159 Sum_probs=129.6
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCce
Q psy11781 915 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 994 (1228)
Q Consensus 915 ~~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~ 994 (1228)
..|.++.++.+|..|+|||.|.+.- +|.+||++ ++.++++..+............|+++- .++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~------------~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~----~~g 89 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNH------------RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR----NSG 89 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGT------------EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET----TTT
T ss_pred CccCCCceEEECCCCCEEEEECCCC------------EEEEECCC-CcEEEEecccCCCcccccCceEEEEEc----CCC
Confidence 4688899999999999999997642 79999987 677766543221111113355677741 468
Q ss_pred EEEEEcCC-CCeEEEEECCCCeEEE-eecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccc
Q psy11781 995 FAYVNDVF-RYGLIVYDFFKNTSYR-LTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 995 ~aYItD~~-~~gLIVydl~~g~swR-v~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
.+|++|.+ ...|.+||. +++..+ +... . ...+.+
T Consensus 90 ~l~v~~~~~~~~i~~~d~-~g~~~~~~~~~-----~--------------~~~~~~------------------------ 125 (286)
T 1q7f_A 90 DIIVTERSPTHQIQIYNQ-YGQFVRKFGAT-----I--------------LQHPRG------------------------ 125 (286)
T ss_dssp EEEEEECGGGCEEEEECT-TSCEEEEECTT-----T--------------CSCEEE------------------------
T ss_pred eEEEEcCCCCCEEEEECC-CCcEEEEecCc-----c--------------CCCceE------------------------
Confidence 89999975 789999994 444333 2110 0 001123
Q ss_pred cccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEec
Q psy11781 1073 HYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLV 1152 (1228)
Q Consensus 1073 ~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~ 1152 (1228)
|+++++++ ||+......+++.++.. .. .+..++..+......++++|++|+||+++.
T Consensus 126 --------i~~~~~g~-l~v~~~~~~~i~~~~~~----g~----------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 126 --------VTVDNKGR-IIVVECKVMRVIIFDQN----GN----------VLHKFGCSKHLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp --------EEECTTSC-EEEEETTTTEEEEECTT----SC----------EEEEEECTTTCSSEEEEEECSSSEEEEEEG
T ss_pred --------EEEeCCCC-EEEEECCCCEEEEEcCC----CC----------EEEEeCCCCccCCcEEEEECCCCCEEEEEC
Confidence 34445665 88887777777777521 11 122333222123477999999999999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeC
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
..+.|.+|+++ +.+ ...+.. ...+.+|.++++|++|+|||...
T Consensus 183 ~~~~i~~~~~~-g~~----~~~~~~-~g~~~~p~~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 183 RAHCVKVFNYE-GQY----LRQIGG-EGITNYPIGVGINSNGEILIADN 225 (286)
T ss_dssp GGTEEEEEETT-CCE----EEEESC-TTTSCSEEEEEECTTCCEEEEEC
T ss_pred CCCEEEEEcCC-CCE----EEEEcc-CCccCCCcEEEECCCCCEEEEeC
Confidence 99999999987 532 222322 33478999999999999999983
No 20
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.92 E-value=1.6e-07 Score=101.24 Aligned_cols=226 Identities=11% Similarity=0.154 Sum_probs=139.2
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 916 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 916 ~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
.+..+.++.+|++|+|||.+.+.. +|..||++ +++. .+.+|.. ......|++| .++.
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~------------~v~~~~~~-~~~~-~~~~~~~----~~~~~~i~~~-----~~g~ 74 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKAN------------KISSLDQS-GRIK-EFEVPTP----DAKVMCLIVS-----SLGD 74 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTT------------EEEEECTT-SCEE-EEECSST----TCCEEEEEEC-----TTSC
T ss_pred CCCCcceeeECCCCCEEEEcCCCC------------eEEEECCC-CceE-EEECCCC----CCcceeEEEC-----CCCC
Confidence 356778999999999999987542 78999998 6665 4666532 2456678887 4577
Q ss_pred EEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEE--cCEEEEeeCCcccee-cCccccccccCCCccccccccc
Q psy11781 996 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYIL--DNLKFRWVDGIFGMA-ISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 996 aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i--~G~~f~~~dGi~Gia-Lsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
+|+++....+|.+||.. ++..++..+.....|. .+.+ +|.-+--..+--+|. +.+. . ....+...
T Consensus 75 l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~--~i~~~~~g~l~v~~~~~~~i~~~~~~--g-------~~~~~~~~ 142 (300)
T 2qc5_A 75 IWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPY--GITEGLNGDIWFTQLNGDRIGKLTAD--G-------TIYEYDLP 142 (300)
T ss_dssp EEEEETTTTEEEEECTT-SCEEEEECSSTTCCEE--EEEECSTTCEEEEETTTTEEEEECTT--S-------CEEEEECS
T ss_pred EEEEecCCCeEEEECCC-CCeEEecCCCCCCCCc--cceECCCCCEEEEccCCCeEEEECCC--C-------CEEEccCC
Confidence 99999988999999998 7766554321111121 1222 232111110000111 1111 0 00011100
Q ss_pred cccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEe
Q psy11781 1073 HYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNL 1151 (1228)
Q Consensus 1073 ~~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~ 1151 (1228)
. ...... |+++++++ ||+....+..+++++. +..+ . .+. + . +......++++|++|+||+++
T Consensus 143 ~-~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~----~g~~-------~-~~~-~-~-~~~~~~~~i~~d~~g~l~v~~ 205 (300)
T 2qc5_A 143 N-KGSYPAFITLGSDNA-LWFTENQNNSIGRITN----TGKL-------E-EYP-L-P-TNAAAPVGITSGNDGALWFVE 205 (300)
T ss_dssp S-TTCCEEEEEECTTSS-EEEEETTTTEEEEECT----TCCE-------E-EEE-C-S-STTCCEEEEEECTTSSEEEEE
T ss_pred C-CCCCceeEEECCCCC-EEEEecCCCeEEEECC----CCcE-------E-Eee-C-C-CCCCCcceEEECCCCCEEEEc
Confidence 0 011223 78889887 9998887777888863 1221 0 111 1 1 111346789999999999999
Q ss_pred cCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEe
Q psy11781 1152 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 1200 (1228)
Q Consensus 1152 ~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvls 1200 (1228)
...+.|.++++. +.+. .... ...+..|.++++|++|+|||.+
T Consensus 206 ~~~~~i~~~~~~-g~~~-----~~~~-~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 206 IMGNKIGRITTT-GEIS-----EYDI-PTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp TTTTEEEEECTT-CCEE-----EEEC-SSTTCCEEEEEECSTTCEEEEE
T ss_pred cCCCEEEEEcCC-CcEE-----EEEC-CCCCCCceEEEECCCCCEEEec
Confidence 999999999986 5432 1221 2346789999999999999998
No 21
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.90 E-value=3e-08 Score=110.85 Aligned_cols=193 Identities=10% Similarity=0.060 Sum_probs=125.3
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCC-ce
Q psy11781 917 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCD-HV 994 (1228)
Q Consensus 917 lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~-~~ 994 (1228)
+..+.++.+|+ .|+|||.|.+. .|+.||+.++++. .+.-... -.+..+.++|++| . ++
T Consensus 79 ~~~p~gi~~~~~~g~l~v~d~~~-------------~i~~~d~~~g~~~-~~~~~~~-~~~~~~p~~i~~d-----~~~G 138 (322)
T 2fp8_A 79 CGRTYDISYNLQNNQLYIVDCYY-------------HLSVVGSEGGHAT-QLATSVD-GVPFKWLYAVTVD-----QRTG 138 (322)
T ss_dssp HCCEEEEEEETTTTEEEEEETTT-------------EEEEECTTCEECE-EEESEET-TEECSCEEEEEEC-----TTTC
T ss_pred CCCCceEEEcCCCCcEEEEECCC-------------CEEEEeCCCCEEE-EecccCC-CCcccccceEEEe-----cCCC
Confidence 34689999996 89999999862 4888998876532 2221000 0122457889998 4 67
Q ss_pred EEEEEcCCC-----------------CeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccc
Q psy11781 995 FAYVNDVFR-----------------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 1057 (1228)
Q Consensus 995 ~aYItD~~~-----------------~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~ 1057 (1228)
.+||+|.+. ++|++||.++++...+.. .+. ...|
T Consensus 139 ~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-----------------~~~---~p~g--------- 189 (322)
T 2fp8_A 139 IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-----------------ELH---VPGG--------- 189 (322)
T ss_dssp CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-----------------EES---CCCE---------
T ss_pred EEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-----------------CCc---cCcc---------
Confidence 899999762 457788777665433210 011 1112
Q ss_pred cccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcc
Q psy11781 1058 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQAS 1137 (1228)
Q Consensus 1058 ~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~ 1137 (1228)
|++++++++||+.-....++++++..- ... ...+.+.+.. + ++
T Consensus 190 -----------------------ia~~~dg~~lyv~d~~~~~I~~~~~~~---~~~--------~~~~~~~~~~--g-P~ 232 (322)
T 2fp8_A 190 -----------------------AEVSADSSFVLVAEFLSHQIVKYWLEG---PKK--------GTAEVLVKIP--N-PG 232 (322)
T ss_dssp -----------------------EEECTTSSEEEEEEGGGTEEEEEESSS---TTT--------TCEEEEEECS--S-EE
T ss_pred -----------------------eEECCCCCEEEEEeCCCCeEEEEECCC---CcC--------CccceEEeCC--C-CC
Confidence 456668999999988878888887431 111 1122222221 3 78
Q ss_pred cEEEcCCCcEEEEecC----------CCeEEEEeCCCCccccCCeeEEEecCC-ceecCCceEEeCCCcEEEEeC
Q psy11781 1138 ASAINSNGVMFYNLVT----------KHSVGCWNTKTKVYLPQTQDIVQTSRD-ILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1138 g~~~D~~G~LY~t~~~----------~~aI~~wn~~~~~~~~~n~~~v~~~~~-~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
|+++|++|+||++... ...|.++|++ +.. ...+...+. .+.+|.++.. .+|+|||.+.
T Consensus 233 gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~----~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~ 301 (322)
T 2fp8_A 233 NIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNI----LEVIPLPPPFAGEHFEQIQE-HDGLLYIGTL 301 (322)
T ss_dssp EEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCE----EEEEECCTTTTTSCCCEEEE-ETTEEEEECS
T ss_pred CeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCE----EEEEECCCCCccccceEEEE-eCCEEEEeec
Confidence 9999999999999876 5789999998 543 233332221 2678999887 4789999963
No 22
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.88 E-value=5.8e-08 Score=109.02 Aligned_cols=182 Identities=14% Similarity=0.102 Sum_probs=113.1
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCccc---Cc---------CccCCCEEEEEECCCCcEEEEEECCCcccccCCCcee
Q psy11781 465 NSLISVFRMSVDKCDRLWIMDTGVTNILS---SI---------QQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSN 532 (1228)
Q Consensus 465 ~~lvsV~~v~iD~~gRLWVLDtG~~~~~~---~~---------~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~d 532 (1228)
..|-.|.++.+|++|+|||.|.+...... +. ......+|++||..++++++.+. .. .-.....
T Consensus 21 ~~l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~--~~---~~~~p~g 95 (329)
T 3fvz_A 21 LLPGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSG--KN---LFYLPHG 95 (329)
T ss_dssp CCCSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEEC--TT---TCSSEEE
T ss_pred eecCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccC--CC---ccCCceE
Confidence 35788999999999999999998621100 00 00122479999999999986442 11 1234668
Q ss_pred EEEEeecCCCCeEEEEecCCCCeEEEEEcCCC--eEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCccc
Q psy11781 533 IVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN--TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYK 610 (1228)
Q Consensus 533 i~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g--~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~ 610 (1228)
|++| .++.+|++|.....|.+||.... ....+... ..+... .+ . .....|||++|
T Consensus 96 ia~d-----~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~-~~~g~~------~~-~---~~~P~~ia~~~------- 152 (329)
T 3fvz_A 96 LSID-----TDGNYWVTDVALHQVFKLDPHSKEGPLLILGRS-MQPGSD------QN-H---FCQPTDVAVEP------- 152 (329)
T ss_dssp EEEC-----TTSCEEEEETTTTEEEEECTTCSSCCSEEESBT-TBCCCS------TT-C---CSSEEEEEECT-------
T ss_pred EEEC-----CCCCEEEEECCCCEEEEEeCCCCeEEEEEeccc-CCCCCC------cc-c---cCCCcEEEEeC-------
Confidence 8998 45669999999999999998654 23332211 000000 00 0 11234555554
Q ss_pred CCCccccccccccccCccccccccCCCceEEEeeC-CCCceEEEechhhcCCCCCCCccccccceEeeccc--------c
Q psy11781 611 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSL-SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR--------F 681 (1228)
Q Consensus 611 ~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~l-ss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~--------g 681 (1228)
++..||+.-. ...+++.++. +.. .+..++.. +
T Consensus 153 -------------------------~~g~lyv~d~~~~~~I~~~~~----~g~----------~~~~~~~~g~~~~~~~~ 193 (329)
T 3fvz_A 153 -------------------------STGAVFVSDGYCNSRIVQFSP----SGK----------FVTQWGEESSGSSPRPG 193 (329)
T ss_dssp -------------------------TTCCEEEEECSSCCEEEEECT----TSC----------EEEEECEECCSSSCCTT
T ss_pred -------------------------CCCeEEEEeCCCCCeEEEEcC----CCC----------EEEEeccCCCCCCCCCc
Confidence 4456888774 5556666642 222 12222221 1
Q ss_pred ccccccceEEccC-CcEEEEcCCCCeEEEEeCC
Q psy11781 682 RNTQASASAINSN-GVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 682 ~~~qs~G~a~D~~-G~LY~t~~~~~aI~~wn~~ 713 (1228)
....+.|+++|.+ |.||+++...+.|.+|+++
T Consensus 194 ~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~ 226 (329)
T 3fvz_A 194 QFSVPHSLALVPHLDQLCVADRENGRIQCFKTD 226 (329)
T ss_dssp EESCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred ccCCCcEEEEECCCCEEEEEECCCCEEEEEECC
Confidence 2234789999976 9999999999999999986
No 23
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.84 E-value=1.4e-07 Score=111.25 Aligned_cols=247 Identities=11% Similarity=0.084 Sum_probs=152.2
Q ss_pred CcccceEEe---CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCc-EEEE
Q psy11781 409 NLPLGIGIW---RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIM 484 (1228)
Q Consensus 409 ~~P~gv~v~---~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gR-LWVL 484 (1228)
.-|.+++++ +++||++-.. ..|..++.+. ..++..- ..+..+.++.+|..|+ |||.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~------~~I~~id~~~----~~v~~~~----------~~~~~P~~ia~d~~G~~lyva 196 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ------HPTRLIDFEK----EYVSTVY----------SGLSKVRTICWTHEADSMIIT 196 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT------EEEEEEETTT----TEEEEEE----------CCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCEEEECCCCCCeEEEEeCC------CcEEEEECCC----CEEEEEe----------cCCCCcceEEEeCCCCEEEEE
Confidence 359999997 4899999643 4677777531 1222211 1456789999999987 9999
Q ss_pred eCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCC
Q psy11781 485 DTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 564 (1228)
Q Consensus 485 DtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g 564 (1228)
|.+.-. ....++.++... ++...-.++ .......+++|. .++++|++|.+...|.+||..++
T Consensus 197 d~~~~~--------~~~~v~~~~~~g-~~~~~~~l~-----~~~~p~giavdp----~~g~lyv~d~~~~~V~~~~~~~~ 258 (430)
T 3tc9_A 197 NDQNNN--------DRPNNYILTRES-GFKVITELT-----KGQNCNGAETHP----INGELYFNSWNAGQVFRYDFTTQ 258 (430)
T ss_dssp ECCSCT--------TSEEEEEEEGGG-TSCSEEEEE-----ECSSCCCEEECT----TTCCEEEEETTTTEEEEEETTTT
T ss_pred eCCCCc--------ccceEEEEeCCC-ceeeeeeec-----cCCCceEEEEeC----CCCEEEEEECCCCEEEEEECCCC
Confidence 986421 123466677543 222111111 234567888982 37899999999999999999876
Q ss_pred eEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEee
Q psy11781 565 TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 644 (1228)
Q Consensus 565 ~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~ 644 (1228)
....+.. +.+ ..+..|||++| ++++||+..
T Consensus 259 ~~~~~~~-------------~~~-----~~~P~gia~~p--------------------------------dG~~lyv~d 288 (430)
T 3tc9_A 259 ETTPLFT-------------IQD-----SGWEFHIQFHP--------------------------------SGNYAYIVV 288 (430)
T ss_dssp EEEEEEE-------------CSS-----SSCCEEEEECT--------------------------------TSSEEEEEE
T ss_pred cEEEEEE-------------cCC-----CCcceeEEEcC--------------------------------CCCEEEEEE
Confidence 5432210 000 01234566654 788999999
Q ss_pred CCCCceEEEechhhcCCCCCCCcccccc-----ceE-eecccccccccc-ceEE--------ccCCcEEEEcCCCCeEEE
Q psy11781 645 LSSNRHYYVSTTDLRNSSRYVNSSDIDE-----YFH-YLGSRFRNTQAS-ASAI--------NSNGVMFYNLVTKHSVGC 709 (1228)
Q Consensus 645 lss~~ly~V~T~~Lr~~~~~~~~~~~~~-----~v~-~lG~~g~~~qs~-G~a~--------D~~G~LY~t~~~~~aI~~ 709 (1228)
..+.++++++..-.. ..+ .....+.. .+. -.+.......+. |+++ |++|+||+++..+++|.+
T Consensus 289 ~~~~~I~~~~~d~~~-~~~-~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~ 366 (430)
T 3tc9_A 289 VNQHYILRSDYDWKT-KRL-TTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRI 366 (430)
T ss_dssp TTTTEEEEEEEETTT-TEE-CCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEE
T ss_pred CCCCEEEEEeCCccc-ccc-cceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEE
Confidence 988889998753210 000 00000000 000 000011122345 8888 467999999999999999
Q ss_pred EeCCCCccCCCCeeEEEec---------C------CceecCCceEEcC-CCcEEEEec
Q psy11781 710 WNTKTKVYLPQTQDIVQTS---------R------DILNFPNDLKIDP-NDNIWILSN 751 (1228)
Q Consensus 710 wn~~~~~~~~~n~~iV~~~---------d------~~L~wPd~l~Id~-dg~LyVlsn 751 (1228)
++++ +.+ ..++.. + .+|.+|.+|++++ +|.|||...
T Consensus 367 i~~~-G~v-----~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 367 LTPQ-GRV-----TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp ECTT-SEE-----EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred ECCC-CcE-----EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 9987 532 333322 1 2488999999998 689999863
No 24
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.84 E-value=5.8e-07 Score=101.22 Aligned_cols=230 Identities=9% Similarity=0.089 Sum_probs=148.2
Q ss_pred CCcccceEEeCCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 858 NNLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 937 (1228)
Q Consensus 858 n~~p~gv~v~~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDtG 937 (1228)
...|.++.++++++|++... . -+|..++..... .+.-+|. ...+..+.++.+|+|||.|..
T Consensus 43 g~~~~~i~~~~~~lyv~~~~--~---~~v~viD~~t~~---~~~~i~~-----------~~~p~~i~~~~~g~lyv~~~~ 103 (328)
T 3dsm_A 43 GDVAQSMVIRDGIGWIVVNN--S---HVIFAIDINTFK---EVGRITG-----------FTSPRYIHFLSDEKAYVTQIW 103 (328)
T ss_dssp BSCEEEEEEETTEEEEEEGG--G---TEEEEEETTTCC---EEEEEEC-----------CSSEEEEEEEETTEEEEEEBS
T ss_pred CccceEEEEECCEEEEEEcC--C---CEEEEEECcccE---EEEEcCC-----------CCCCcEEEEeCCCeEEEEECC
Confidence 34678899999999999853 2 367777753221 2233332 234667788777899999964
Q ss_pred CCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-CCeEEEEECCCCeE
Q psy11781 938 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTS 1016 (1228)
Q Consensus 938 ~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-~~gLIVydl~~g~s 1016 (1228)
. -+|.+||++|+++++++.++... ........|+++ ++.+|+++.+ ...|.|+|+++++.
T Consensus 104 ~------------~~v~~iD~~t~~~~~~i~~g~~~-~~~~~p~~i~~~------~~~lyv~~~~~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 104 D------------YRIFIINPKTYEITGYIECPDMD-MESGSTEQMVQY------GKYVYVNCWSYQNRILKIDTETDKV 164 (328)
T ss_dssp C------------SEEEEEETTTTEEEEEEECTTCC-TTTCBCCCEEEE------TTEEEEEECTTCCEEEEEETTTTEE
T ss_pred C------------CeEEEEECCCCeEEEEEEcCCcc-ccCCCcceEEEE------CCEEEEEcCCCCCEEEEEECCCCeE
Confidence 2 27999999999999999886521 111234567775 6789999985 78999999999875
Q ss_pred EEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeCC
Q psy11781 1017 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLS 1096 (1228)
Q Consensus 1017 wRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~pls 1096 (1228)
.+... + | .+..+ ++++++++ ||+..+.
T Consensus 165 ~~~i~-------------~-g------~~p~~--------------------------------i~~~~dG~-l~v~~~~ 191 (328)
T 3dsm_A 165 VDELT-------------I-G------IQPTS--------------------------------LVMDKYNK-MWTITDG 191 (328)
T ss_dssp EEEEE-------------C-S------SCBCC--------------------------------CEECTTSE-EEEEBCC
T ss_pred EEEEE-------------c-C------CCccc--------------------------------eEEcCCCC-EEEEECC
Confidence 44210 0 0 01112 34555676 7887776
Q ss_pred C----------CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcC-CCcEEEEecCCCeEEEEeCCCC
Q psy11781 1097 S----------NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNLVTKHSVGCWNTKTK 1165 (1228)
Q Consensus 1097 s----------~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~-~G~LY~t~~~~~aI~~wn~~~~ 1165 (1228)
. ..++.++++-.+ +...+. ++ .| ..+.+++++. .+.||+++- .|.+||++++
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~~----------v~~~~~-~~-~g--~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~ 254 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETFT----------VEKQFK-FK-LG--DWPSEVQLNGTRDTLYWINN---DIWRMPVEAD 254 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTTE----------EEEEEE-CC-TT--CCCEEEEECTTSCEEEEESS---SEEEEETTCS
T ss_pred CccCCccccCCceEEEEECCCCe----------EEEEEe-cC-CC--CCceeEEEecCCCEEEEEcc---EEEEEECCCC
Confidence 4 578888753221 111111 11 11 2468999996 557888764 8999999854
Q ss_pred ccccCCeeEEEecCCceecCCceEEeC-CCcEEEEe
Q psy11781 1166 VYLPQTQDIVQTSRDILNFPNDLKIDP-NDNIWILS 1200 (1228)
Q Consensus 1166 ~~~~~n~~~v~~~~~~L~wPd~l~id~-dg~Lyvls 1200 (1228)
.... ...+ . .....|.++++++ +|+|||..
T Consensus 255 ~~~~--~~~~-~--~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 255 RVPV--RPFL-E--FRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp SCCS--SCSB-C--CCSSCEEEEEECTTTCCEEEEE
T ss_pred ceee--eeee-c--CCCCceEEEEEcCCCCeEEEEc
Confidence 4321 1111 1 1146899999997 78999996
No 25
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.83 E-value=2.1e-07 Score=108.81 Aligned_cols=198 Identities=11% Similarity=0.057 Sum_probs=128.7
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeE
Q psy11781 466 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 545 (1228)
Q Consensus 466 ~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~ 545 (1228)
.|.++.++.+|++|+|||+|.+. .+|.+||++++++...... ..... ++++. ++..
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~------------~~I~~id~~~g~~~~~~~~-------~~~~~-ia~~~----~g~~ 184 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDD------------PRVRLISVDDNKVTTVHPG-------FKGGK-PAVTK----DKQR 184 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTT------------TEEEEEETTTTEEEEEEET-------CCBCB-CEECT----TSSE
T ss_pred ccCCceEEEEeCCCCEEEEecCC------------CcEEEEECCCCEEEEeecc-------CCCCc-eeEec----CCCc
Confidence 58999999999999999999863 3599999999887654332 11123 77762 4668
Q ss_pred EEEecCCCC-eEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccc
Q psy11781 546 AYVNDVFRY-GLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 624 (1228)
Q Consensus 546 aYItDs~~~-gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~ 624 (1228)
+|++|.... .|.++|..++...+.... ..+. ...+..++|++|
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~-~~~~--------------~~~~p~~iav~p--------------------- 228 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQ-LGST--------------FSGKIGAVALDE--------------------- 228 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEE-CCTT--------------SCSCCCBCEECT---------------------
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeee-ccch--------------hcCCcEEEEEeC---------------------
Confidence 999998655 899999887654332200 0000 001233455544
Q ss_pred cCccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeecccccccccc-ceEEcc-CCcEEEEcC
Q psy11781 625 NGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQAS-ASAINS-NGVMFYNLV 702 (1228)
Q Consensus 625 ~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~-G~a~D~-~G~LY~t~~ 702 (1228)
+++.||+... ..+++++..+- .. ..........|..+ ..+. ++++|. +|.||+++.
T Consensus 229 -----------~~g~lyv~d~-~~~I~~~d~~~---~~-----~~~~~~~~~~g~~~--~~P~~~ia~~p~~g~lyv~d~ 286 (409)
T 3hrp_A 229 -----------TEEWLYFVDS-NKNFGRFNVKT---QE-----VTLIKQLELSGSLG--TNPGPYLIYYFVDSNFYMSDQ 286 (409)
T ss_dssp -----------TSSEEEEECT-TCEEEEEETTT---CC-----EEEEEECCCCSCCC--CSSCCEEEEETTTTEEEEEET
T ss_pred -----------CCCeEEEEEC-CCcEEEEECCC---CC-----EEEEecccccCCCC--CCccccEEEeCCCCEEEEEeC
Confidence 5678999544 55688887421 11 00110111122222 1123 999997 799999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecC------------CceecCCceEEcCCCcEEEEec
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSR------------DILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d------------~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
..+.|.+|+.+ +. ...++... .+|.+|.+++++++|.|||...
T Consensus 287 ~~~~I~~~~~~-g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 287 NLSSVYKITPD-GE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp TTTEEEEECTT-CC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCCEEEEEecC-CC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 99999999987 43 23333221 3488999999999999999864
No 26
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.83 E-value=2.5e-07 Score=108.24 Aligned_cols=197 Identities=9% Similarity=0.021 Sum_probs=129.4
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 916 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 916 ~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
.|.++.+|.+|++|+|||.|.+.. +|..||++++++...... ...-. ++++. ++..
T Consensus 129 ~~~~P~~la~d~~g~lyv~d~~~~------------~I~~id~~~g~~~~~~~~-------~~~~~-ia~~~----~g~~ 184 (409)
T 3hrp_A 129 KFKYMWGIAAVGNNTVLAYQRDDP------------RVRLISVDDNKVTTVHPG-------FKGGK-PAVTK----DKQR 184 (409)
T ss_dssp CCCCEEEEEECSTTEEEEEETTTT------------EEEEEETTTTEEEEEEET-------CCBCB-CEECT----TSSE
T ss_pred ccCCceEEEEeCCCCEEEEecCCC------------cEEEEECCCCEEEEeecc-------CCCCc-eeEec----CCCc
Confidence 589999999999999999998643 799999999988754433 11122 66763 4679
Q ss_pred EEEEcCCCC-eEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccc
Q psy11781 996 AYVNDVFRY-GLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 1074 (1228)
Q Consensus 996 aYItD~~~~-gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~ 1074 (1228)
+|++|.... .|+++|..++...+..-. +.+. ...+..+
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~-~~~~--------------~~~~p~~-------------------------- 223 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQ-LGST--------------FSGKIGA-------------------------- 223 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEE-CCTT--------------SCSCCCB--------------------------
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeee-ccch--------------hcCCcEE--------------------------
Confidence 999998665 899999877654332200 0000 0001112
Q ss_pred cCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCC-Ccc-cEEEcC-CCcEEEEe
Q psy11781 1075 NGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNT-QAS-ASAINS-NGVMFYNL 1151 (1228)
Q Consensus 1075 ~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~s-qs~-g~~~D~-~G~LY~t~ 1151 (1228)
++++|++..||+.- ...++++++.+-- . ...+...+..+..+ .+. ++++|+ +|.||+++
T Consensus 224 ------iav~p~~g~lyv~d-~~~~I~~~d~~~~---~--------~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 224 ------VALDETEEWLYFVD-SNKNFGRFNVKTQ---E--------VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp ------CEECTTSSEEEEEC-TTCEEEEEETTTC---C--------EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred ------EEEeCCCCeEEEEE-CCCcEEEEECCCC---C--------EEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 55666678899954 4557888874211 0 01111111111111 123 999997 79999999
Q ss_pred cCCCeEEEEeCCCCccccCCeeEEEecC------------CceecCCceEEeCCCcEEEEeC
Q psy11781 1152 VTKHSVGCWNTKTKVYLPQTQDIVQTSR------------DILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1152 ~~~~aI~~wn~~~~~~~~~n~~~v~~~~------------~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
..++.|.+|+.+ +. ..+++-.. .+|.+|.+++++++|+|||...
T Consensus 286 ~~~~~I~~~~~~-g~-----~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 286 QNLSSVYKITPD-GE-----CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp TTTTEEEEECTT-CC-----EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred CCCCEEEEEecC-CC-----EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 999999999988 43 23333221 3488999999999999999876
No 27
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.82 E-value=2e-07 Score=104.56 Aligned_cols=211 Identities=10% Similarity=0.083 Sum_probs=130.2
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCc-EEEEEECCCCcc---cCCCcceeeEEEeecC
Q psy11781 915 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT-LIRKYILPTAQV---FEGSLFSNIVTEVVED 990 (1228)
Q Consensus 915 ~~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~-lir~y~~p~~~~---~~~S~l~di~VD~~~~ 990 (1228)
..+..+.++.+|.+|+|||.|++.- +|..||+.... .++++.-+...- ..-..-..|++|.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~------------~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~--- 152 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALH------------QVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEP--- 152 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTT------------EEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECT---
T ss_pred CccCCceEEEECCCCCEEEEECCCC------------EEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeC---
Confidence 3467899999999999999999753 79999986652 444332111000 0112355688872
Q ss_pred CCceEEEEEcC-CCCeEEEEECCCCeEEEee-cCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccc
Q psy11781 991 CDHVFAYVNDV-FRYGLIVYDFFKNTSYRLT-HPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYH 1068 (1228)
Q Consensus 991 c~~~~aYItD~-~~~gLIVydl~~g~swRv~-h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~ 1068 (1228)
+++.+|++|+ +...|.+||. +|+..+.. .......+. .+ .+. ...|
T Consensus 153 -~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~------~~-~~~---~p~g-------------------- 200 (329)
T 3fvz_A 153 -STGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPR------PG-QFS---VPHS-------------------- 200 (329)
T ss_dssp -TTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCC------TT-EES---CEEE--------------------
T ss_pred -CCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCC------Cc-ccC---CCcE--------------------
Confidence 2689999997 7899999995 44443321 110000000 00 010 0111
Q ss_pred cccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCC------CCcccEEEc
Q psy11781 1069 YNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRN------TQASASAIN 1142 (1228)
Q Consensus 1069 ~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~------sqs~g~~~D 1142 (1228)
|++++++..||..-....++..++.+ ...+ ++.++..+.. ..+.|++++
T Consensus 201 ------------ia~d~~~g~l~v~d~~~~~I~~~~~~---~G~~----------~~~~~~~~~~~~~~~~~~~pg~~~~ 255 (329)
T 3fvz_A 201 ------------LALVPHLDQLCVADRENGRIQCFKTD---TKEF----------VREIKHASFGRNVFAISYIPGFLFA 255 (329)
T ss_dssp ------------EEEETTTTEEEEEETTTTEEEEEETT---TCCE----------EEEECCTTTTTCEEEEEEETTEEEE
T ss_pred ------------EEEECCCCEEEEEECCCCEEEEEECC---CCcE----------EEEEeccccCCCcceeeecCCEEEE
Confidence 56677877899998888878777643 1111 1111100000 001178888
Q ss_pred CCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeC
Q psy11781 1143 SNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1143 ~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
.+|++|+++.....|..|+..++.. ...+......+.+|.+++++++|+|||...
T Consensus 256 ~~g~~~v~~~~~~~v~~~~~~~g~~----~~~~~~~~~~~~~p~~ia~~~dG~lyvad~ 310 (329)
T 3fvz_A 256 VNGKPYFGDQEPVQGFVMNFSSGEI----IDVFKPVRKHFDMPHDIVASEDGTVYIGDA 310 (329)
T ss_dssp EECCCCTTCSCCCCEEEEETTTCCE----EEEECCSSSCCSSEEEEEECTTSEEEEEES
T ss_pred eCCCEEeccCCCcEEEEEEcCCCeE----EEEEcCCCCccCCeeEEEECCCCCEEEEEC
Confidence 8999999999999999999763432 233332345788999999999999999873
No 28
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.78 E-value=4.4e-07 Score=99.35 Aligned_cols=230 Identities=8% Similarity=-0.033 Sum_probs=138.6
Q ss_pred CCcccceEEe-CCe-EEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 408 NNLPLGIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 485 (1228)
Q Consensus 408 n~~P~gv~v~-~gR-iFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLD 485 (1228)
...|.|+.+. +|+ ++++--+ . -+|..++... . .+.|.. ....+.++.+|++|+|||.+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~--~---~~i~~~~~~~----~-~~~~~~----------~~~~~~~l~~~~dg~l~v~~ 86 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVR--Q---NRTWAWSDDG----Q-LSPEMH----------PSHHQNGHCLNKQGHLIACS 86 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGG--G---TEEEEEETTS----C-EEEEES----------SCSSEEEEEECTTCCEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCC--C---CEEEEEECCC----C-eEEEEC----------CCCCcceeeECCCCcEEEEe
Confidence 3467888887 555 5554322 1 1566666421 1 333321 11247789999999999999
Q ss_pred CCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC-------------
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------------- 552 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~------------- 552 (1228)
.|.. .|.+||++++++........ .......+++++| .++.+|+||+.
T Consensus 87 ~~~~------------~i~~~d~~~g~~~~~~~~~~--~~~~~~~~~i~~d-----~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 87 HGLR------------RLERQREPGGEWESIADSFE--GKKLNSPNDVCLA-----PDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp TTTT------------EEEEECSTTCCEEEEECEET--TEECCCCCCEEEC-----TTSCEEEEECSHHHHCGGGSSCCC
T ss_pred cCCC------------eEEEEcCCCCcEEEEeeccC--CCCCCCCCCEEEC-----CCCCEEEECCcccccccccccccc
Confidence 8742 39999999998653322111 1223457899998 56789999862
Q ss_pred ----CCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 553 ----RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 553 ----~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
..+|..+|.. ++..++... .....||+++|
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~--------------------~~~~~gi~~s~------------------------- 181 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRD--------------------RVKPNGLAFLP------------------------- 181 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECC--------------------CSSEEEEEECT-------------------------
T ss_pred ccCCCcEEEEECCC-CCEEEeecC--------------------CCCCccEEECC-------------------------
Confidence 2356666555 443332211 01124566655
Q ss_pred ccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEE
Q psy11781 629 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVG 708 (1228)
Q Consensus 629 ~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~ 708 (1228)
+++.| +.......++.++.+ .++. +....+.+ +.+ .+.+.|+++|++|+||++. .+.|.
T Consensus 182 -------dg~~l-v~~~~~~~i~~~~~~--~~g~-------~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 182 -------SGNLL-VSDTGDNATHRYCLN--ARGE-------TEYQGVHF-TVE-PGKTDGLRVDAGGLIWASA--GDGVH 240 (296)
T ss_dssp -------TSCEE-EEETTTTEEEEEEEC--SSSC-------EEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEE--TTEEE
T ss_pred -------CCCEE-EEeCCCCeEEEEEEC--CCCc-------CcCCCeEe-eCC-CCCCCeEEECCCCCEEEEc--CCeEE
Confidence 67777 776666678777643 1111 10011122 111 2357899999999999999 78999
Q ss_pred EEeCCCCccCCCCeeEEEecCCceecCCceEEc-CCC-cEEEEecC
Q psy11781 709 CWNTKTKVYLPQTQDIVQTSRDILNFPNDLKID-PND-NIWILSNK 752 (1228)
Q Consensus 709 ~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id-~dg-~LyVlsnr 752 (1228)
+|+++ +.. +..+.. ... |..++++ +++ .|||.++.
T Consensus 241 ~~~~~-g~~----~~~~~~-~~~---~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 241 VLTPD-GDE----LGRVLT-PQT---TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EECTT-SCE----EEEEEC-SSC---CCEEEEESTTSCEEEEEETT
T ss_pred EECCC-CCE----EEEEEC-CCC---ceeEEEECCCCCEEEEEcCC
Confidence 99998 432 234432 222 8888884 555 69998853
No 29
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.78 E-value=4.3e-07 Score=102.28 Aligned_cols=192 Identities=13% Similarity=0.136 Sum_probs=128.0
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCC---cEEEEEECCCcccccCCCceeEEEEeecCCC
Q psy11781 467 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCD 542 (1228)
Q Consensus 467 lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td---~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~ 542 (1228)
+..+.++..|. .++||+.|.+. .+|..+|+.+. +...+ .++.. ......|+||. .
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~------------~~I~~~~~~g~~~~~~~~~-~~~~~----~~~p~glavd~----~ 87 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDT-VISRD----IQAPDGLAVDW----I 87 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEE-EECSS----CSCCCEEEEET----T
T ss_pred CCceEEEEEEeCCCEEEEEECCC------------CcEEEEECCCCCCCcccEE-EEeCC----CCCcCEEEEee----c
Confidence 56688999996 67999999873 35999999862 22221 12211 13356899983 3
Q ss_pred CeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccc
Q psy11781 543 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 622 (1228)
Q Consensus 543 ~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~ 622 (1228)
++.+|++|.....|.|+|+.......+... + .....|||++|
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--------------~-----~~~P~~iavdp------------------- 129 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N-----GSKPRAIVVDP------------------- 129 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC--------------T-----TCCEEEEEEET-------------------
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEEC--------------C-----CCCcceEEeCC-------------------
Confidence 678999999999999999875432222110 0 01123555544
Q ss_pred cccCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEE
Q psy11781 623 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 700 (1228)
Q Consensus 623 ~~~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t 700 (1228)
.++.|||.-... .+++++.. +++. .+.+...+ ...+.|+++| .+|.||++
T Consensus 130 -------------~~g~ly~~d~~~~~~I~~~~~----dG~~----------~~~~~~~~-~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 130 -------------VHGFMYWTDWGTPAKIKKGGL----NGVD----------IYSLVTEN-IQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp -------------TTTEEEEEECSSSCEEEEEET----TSCC----------EEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred -------------CCCEEEEEccCCCCeEEEEcC----CCCC----------eEEEEECC-CCCceEEEEeccCCEEEEE
Confidence 567899998765 56777763 2221 12222211 2468999999 68999999
Q ss_pred cCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 701 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 701 ~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
+...+.|.+++.+ + .+..++......+.+|.||+++ ++.||+...
T Consensus 182 D~~~~~I~~~d~d-g----~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~ 226 (316)
T 1ijq_A 182 DSKLHSISSIDVN-G----GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 226 (316)
T ss_dssp ETTTTEEEEEETT-S----CSCEEEEECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred ECCCCeEEEEecC-C----CceEEEeecCCccCCcEEEEEE-CCEEEEEEC
Confidence 9999999999998 4 2345666555678999999997 578999874
No 30
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.77 E-value=4.6e-07 Score=103.75 Aligned_cols=192 Identities=12% Similarity=0.108 Sum_probs=130.4
Q ss_pred cceEEEEEEEe-CCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 466 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 466 ~lvsV~~v~iD-~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
.+..+.++..| ..++||+.|.+. .+|..+++.+..+...+ .. .......|+||. .++
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~--~~----~~~~p~glavd~----~~g 128 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVV--ST----GLESPGGLAVDW----VHD 128 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCSCEEEE--CS----SCSCCCEEEEET----TTT
T ss_pred CCCceEEEEEeccccEEEEEeccC------------CceEEEecCCCCceEEE--eC----CCCCccEEEEec----CCC
Confidence 35568899999 588999999864 35999999876643221 11 113456899993 468
Q ss_pred EEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccc
Q psy11781 545 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 624 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~ 624 (1228)
.+|++|.+...|.|+++.... .+++.. .+ .....|||++|
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~-~~~l~~-------------~~-----l~~P~~iavdp--------------------- 168 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAH-RKVLLW-------------QS-----LEKPRAIALHP--------------------- 168 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEEC-------------TT-----CSCEEEEEEET---------------------
T ss_pred eEEEEcCCCCeEEEEcCCCCc-eEEEEe-------------CC-----CCCcceEEEec---------------------
Confidence 999999999999999987542 222100 00 01123555554
Q ss_pred cCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEcC
Q psy11781 625 NGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 702 (1228)
Q Consensus 625 ~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~~ 702 (1228)
.++.|||.-... .+++++.. +++. .+.+...+ ...+.|+++| .+|.||+++.
T Consensus 169 -----------~~g~ly~td~~~~~~I~r~~~----dG~~----------~~~~~~~~-~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 169 -----------MEGTIYWTDWGNTPRIEASSM----DGSG----------RRIIADTH-LFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp -----------TTTEEEEEECSSSCEEEEEET----TSCS----------CEESCCSS-CSCEEEEEEETTTTEEEEEET
T ss_pred -----------CcCeEEEeccCCCCEEEEEeC----CCCC----------cEEEEECC-CCCcceEEEeCCCCEEEEEEC
Confidence 567899998877 77888864 2221 11222222 2458999999 7999999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCc
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKL 753 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl 753 (1228)
..+.|.+++.+ +. +...+.. ..+.+|+||+++ ++.||+..-.-
T Consensus 223 ~~~~I~~~~~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~ 265 (349)
T 3v64_C 223 KHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHT 265 (349)
T ss_dssp TTTEEEEEETT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTT
T ss_pred CCCEEEEEeCC-CC----ceEEEEe--CCCCCceEEEEE-CCEEEEecCCC
Confidence 99999999998 42 3344432 247899999995 67899987443
No 31
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.77 E-value=1.7e-07 Score=100.25 Aligned_cols=185 Identities=12% Similarity=0.150 Sum_probs=120.6
Q ss_pred EEEEEEEeCCCcEEE-EeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEE
Q psy11781 469 SVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 547 (1228)
Q Consensus 469 sV~~v~iD~~gRLWV-LDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aY 547 (1228)
.+.++.+|++|+||| .|++. -+|.+||..+.+.. .++. ........|++| .++.+|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~------------~~i~~~~~~~~~~~---~~~~---~~~~~p~~i~~~-----~~g~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMY------------GRVVKLATGSTGTT---VLPF---NGLYQPQGLAVD-----GAGTVY 81 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSS------------CEEEEECC-----E---ECCC---CSCCSCCCEEEC-----TTCCEE
T ss_pred CccceEECCCCCEEEEccCCC------------CcEEEecCCCcccc---eEee---CCcCCcceeEEC-----CCCCEE
Confidence 899999999999999 88753 24889998765532 1211 122346678887 456699
Q ss_pred EecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCc
Q psy11781 548 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 627 (1228)
Q Consensus 548 ItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1228)
++|. ..+|.+||..++..+.+.. .+ .....+|++++
T Consensus 82 v~~~-~~~i~~~d~~~~~~~~~~~--------------~~-----~~~p~~i~~~~------------------------ 117 (270)
T 1rwi_B 82 VTDF-NNRVVTLAAGSNNQTVLPF--------------DG-----LNYPEGLAVDT------------------------ 117 (270)
T ss_dssp EEET-TTEEEEECTTCSCCEECCC--------------CS-----CSSEEEEEECT------------------------
T ss_pred EEcC-CCEEEEEeCCCceEeeeec--------------CC-----cCCCcceEECC------------------------
Confidence 9998 7799999988765443221 00 01234566654
Q ss_pred cccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeE
Q psy11781 628 NVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSV 707 (1228)
Q Consensus 628 ~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI 707 (1228)
+++ ||+.......+++++.. +. . ......+ + ...+.++++|.+|+||+++...+.|
T Consensus 118 --------~g~-l~v~~~~~~~i~~~~~~-----~~--~-----~~~~~~~--~-~~~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 118 --------QGA-VYVADRGNNRVVKLAAG-----SK--T-----QTVLPFT--G-LNDPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp --------TCC-EEEEEGGGTEEEEECTT-----CC--S-----CEECCCC--S-CCSCCCEEECTTCCEEEEEGGGTEE
T ss_pred --------CCC-EEEEECCCCEEEEEECC-----Cc--e-----eEeeccc--c-CCCceeEEEeCCCCEEEEECCCCEE
Confidence 444 88887766678888421 10 0 0000011 1 1347899999999999999999999
Q ss_pred EEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 708 GCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 708 ~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
.+|++. +.. ........+..|.+++++++|+|||.+.
T Consensus 174 ~~~~~~-~~~------~~~~~~~~~~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 174 VKLEAE-SNN------QVVLPFTDITAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp EEECTT-TCC------EEECCCSSCCSEEEEEECTTCCEEEEET
T ss_pred EEEecC-CCc------eEeecccCCCCceEEEECCCCCEEEEEC
Confidence 999997 321 1111223457899999999999999874
No 32
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.76 E-value=3.6e-07 Score=107.79 Aligned_cols=239 Identities=10% Similarity=0.080 Sum_probs=149.4
Q ss_pred cccceEEe---CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCc-EEEEe
Q psy11781 860 LPLGIGIW---RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMD 935 (1228)
Q Consensus 860 ~p~gv~v~---~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~gr-LWVLD 935 (1228)
-|.+++++ +++||++-.. -.|..++.+. + .+...- ..+..+.+|.+|..|+ |||.|
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~------~~I~~id~~~-~---~v~~~~----------~~~~~P~~ia~d~~G~~lyvad 197 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQ------HPTRLIDFEK-E---YVSTVY----------SGLSKVRTICWTHEADSMIITN 197 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBT------EEEEEEETTT-T---EEEEEE----------CCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCC------CcEEEEECCC-C---EEEEEe----------cCCCCcceEEEeCCCCEEEEEe
Confidence 58999997 5899999743 4666776421 1 222211 1356789999999988 99999
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCe
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT 1015 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~ 1015 (1228)
.+... ....++.++.... +...-.++ .......+++|. .++++|++|.+...|.+||..++.
T Consensus 198 ~~~~~--------~~~~v~~~~~~g~-~~~~~~l~-----~~~~p~giavdp----~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 198 DQNNN--------DRPNNYILTRESG-FKVITELT-----KGQNCNGAETHP----INGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp CCSCT--------TSEEEEEEEGGGT-SCSEEEEE-----ECSSCCCEEECT----TTCCEEEEETTTTEEEEEETTTTE
T ss_pred CCCCc--------ccceEEEEeCCCc-eeeeeeec-----cCCCceEEEEeC----CCCEEEEEECCCCEEEEEECCCCc
Confidence 86532 1224666665433 22111121 123456788873 268999999999999999998765
Q ss_pred EEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeC
Q psy11781 1016 SYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSL 1095 (1228)
Q Consensus 1016 swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~pl 1095 (1228)
...+. .+.+ ..+..| |+++|++++||+.-.
T Consensus 260 ~~~~~-------------~~~~-----~~~P~g--------------------------------ia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 260 TTPLF-------------TIQD-----SGWEFH--------------------------------IQFHPSGNYAYIVVV 289 (430)
T ss_dssp EEEEE-------------ECSS-----SSCCEE--------------------------------EEECTTSSEEEEEET
T ss_pred EEEEE-------------EcCC-----CCccee--------------------------------EEEcCCCCEEEEEEC
Confidence 43221 0000 001122 456668999999999
Q ss_pred CCCceEEEecchhcCCcccCCccccccceEEec---ccc---------CCCCcc-cEEE--------cCCCcEEEEecCC
Q psy11781 1096 SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG---SRF---------RNTQAS-ASAI--------NSNGVMFYNLVTK 1154 (1228)
Q Consensus 1096 ss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG---~rg---------~~sqs~-g~~~--------D~~G~LY~t~~~~ 1154 (1228)
.+.++++++..-.. ..+ .......| ..| .-..+. |+++ |++|+||+++..+
T Consensus 290 ~~~~I~~~~~d~~~-~~~-------~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n 361 (430)
T 3tc9_A 290 NQHYILRSDYDWKT-KRL-------TTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDREN 361 (430)
T ss_dssp TTTEEEEEEEETTT-TEE-------CCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGG
T ss_pred CCCEEEEEeCCccc-ccc-------cceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCC
Confidence 99999998753210 000 00001111 111 011244 7888 5679999999999
Q ss_pred CeEEEEeCCCCccccCCeeEEEec---------------CCceecCCceEEeC-CCcEEEEe
Q psy11781 1155 HSVGCWNTKTKVYLPQTQDIVQTS---------------RDILNFPNDLKIDP-NDNIWILS 1200 (1228)
Q Consensus 1155 ~aI~~wn~~~~~~~~~n~~~v~~~---------------~~~L~wPd~l~id~-dg~Lyvls 1200 (1228)
++|.+++++ +.+ ..++-. ..+|.+|.+|++|+ +|+|||..
T Consensus 362 ~~I~~i~~~-G~v-----~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD 417 (430)
T 3tc9_A 362 HCIRILTPQ-GRV-----TTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGD 417 (430)
T ss_dssp TEEEEECTT-SEE-----EEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEE
T ss_pred cEEEEECCC-CcE-----EEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEE
Confidence 999999987 643 333322 12488999999998 68999985
No 33
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.76 E-value=1.2e-06 Score=98.57 Aligned_cols=229 Identities=9% Similarity=0.096 Sum_probs=148.0
Q ss_pred CcccceEEeCCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCC
Q psy11781 409 NLPLGIGIWRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGV 488 (1228)
Q Consensus 409 ~~P~gv~v~~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG~ 488 (1228)
..|.++.++.+++|++... . -+|..++.+.. -.+.-+|. +..+..+.++.+|+|||.|...
T Consensus 44 ~~~~~i~~~~~~lyv~~~~--~---~~v~viD~~t~---~~~~~i~~-----------~~~p~~i~~~~~g~lyv~~~~~ 104 (328)
T 3dsm_A 44 DVAQSMVIRDGIGWIVVNN--S---HVIFAIDINTF---KEVGRITG-----------FTSPRYIHFLSDEKAYVTQIWD 104 (328)
T ss_dssp SCEEEEEEETTEEEEEEGG--G---TEEEEEETTTC---CEEEEEEC-----------CSSEEEEEEEETTEEEEEEBSC
T ss_pred ccceEEEEECCEEEEEEcC--C---CEEEEEECccc---EEEEEcCC-----------CCCCcEEEEeCCCeEEEEECCC
Confidence 4678899999999999853 2 36777876421 12222321 3456788887778999999642
Q ss_pred CCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC-CCeEEEEEcCCCeEE
Q psy11781 489 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSY 567 (1228)
Q Consensus 489 ~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~-~~gLIVyDl~~g~sw 567 (1228)
-+|.+||++|+++++++..+... ........|+++ ++.+|+++.+ ...|.|+|+++++.-
T Consensus 105 ------------~~v~~iD~~t~~~~~~i~~g~~~-~~~~~p~~i~~~------~~~lyv~~~~~~~~v~viD~~t~~~~ 165 (328)
T 3dsm_A 105 ------------YRIFIINPKTYEITGYIECPDMD-MESGSTEQMVQY------GKYVYVNCWSYQNRILKIDTETDKVV 165 (328)
T ss_dssp ------------SEEEEEETTTTEEEEEEECTTCC-TTTCBCCCEEEE------TTEEEEEECTTCCEEEEEETTTTEEE
T ss_pred ------------CeEEEEECCCCeEEEEEEcCCcc-ccCCCcceEEEE------CCEEEEEcCCCCCEEEEEECCCCeEE
Confidence 34999999999999998886521 112245677775 6789999985 789999999998754
Q ss_pred EEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCC
Q psy11781 568 RLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSS 647 (1228)
Q Consensus 568 Rv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss 647 (1228)
+... + ..+..+|+++ ++|+ +|+.....
T Consensus 166 ~~i~-------------~-------g~~p~~i~~~--------------------------------~dG~-l~v~~~~~ 192 (328)
T 3dsm_A 166 DELT-------------I-------GIQPTSLVMD--------------------------------KYNK-MWTITDGG 192 (328)
T ss_dssp EEEE-------------C-------SSCBCCCEEC--------------------------------TTSE-EEEEBCCB
T ss_pred EEEE-------------c-------CCCccceEEc--------------------------------CCCC-EEEEECCC
Confidence 4220 0 0112234443 3565 78877764
Q ss_pred ----------CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEcc-CCcEEEEcCCCCeEEEEeCCCCc
Q psy11781 648 ----------NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNLVTKHSVGCWNTKTKV 716 (1228)
Q Consensus 648 ----------~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~-~G~LY~t~~~~~aI~~wn~~~~~ 716 (1228)
..++.++++-.+ +...+. ++ .| ..+.+++++. .+.||+++. .|.+||+.++.
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~----------v~~~~~-~~-~g--~~p~~la~~~d~~~lyv~~~---~v~~~d~~t~~ 255 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFT----------VEKQFK-FK-LG--DWPSEVQLNGTRDTLYWINN---DIWRMPVEADR 255 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTE----------EEEEEE-CC-TT--CCCEEEEECTTSCEEEEESS---SEEEEETTCSS
T ss_pred ccCCccccCCceEEEEECCCCe----------EEEEEe-cC-CC--CCceeEEEecCCCEEEEEcc---EEEEEECCCCc
Confidence 568888753211 111111 11 12 2478999995 567888765 89999997443
Q ss_pred cCCCCeeEEEecCCceecCCceEEcC-CCcEEEEe
Q psy11781 717 YLPQTQDIVQTSRDILNFPNDLKIDP-NDNIWILS 750 (1228)
Q Consensus 717 ~~~~n~~iV~~~d~~L~wPd~l~Id~-dg~LyVls 750 (1228)
... ...+. . ....|.++++++ +|+|||..
T Consensus 256 ~~~--~~~~~--~-~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 256 VPV--RPFLE--F-RDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp CCS--SCSBC--C-CSSCEEEEEECTTTCCEEEEE
T ss_pred eee--eeeec--C-CCCceEEEEEcCCCCeEEEEc
Confidence 321 11121 1 146899999997 78999986
No 34
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.75 E-value=4.2e-07 Score=105.54 Aligned_cols=190 Identities=13% Similarity=0.106 Sum_probs=129.2
Q ss_pred cceEEEEEEEe-CCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 466 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 466 ~lvsV~~v~iD-~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
.+..+.++..| ..++||+.|.+. .+|..+++.+..+...+. . .......|+||. .++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~------------~~I~r~~~~g~~~~~~~~--~----~~~~p~glavd~----~~g 171 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTL------------DRILRANLNGSNVEEVVS--T----GLESPGGLAVDW----VHD 171 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEETTSCCEEEEEC--S----SCSCCCCEEEET----TTT
T ss_pred CCCccEEEEEecCCCeEEEEeCCC------------CcEEEEecCCCCcEEEEe--C----CCCCccEEEEEe----CCC
Confidence 45678999999 588999999874 359999998776443221 1 113456899993 468
Q ss_pred EEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccc
Q psy11781 545 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 624 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~ 624 (1228)
.+|++|.+...|.|+++.......+.. .+ .....|||++|
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~--------------~~-----l~~P~giavdp--------------------- 211 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLW--------------QS-----LEKPRAIALHP--------------------- 211 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEEC--------------SS-----CSCEEEEEEET---------------------
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeec--------------CC-----CCCCcEEEEEc---------------------
Confidence 999999999999998887532211110 00 01123555544
Q ss_pred cCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEcC
Q psy11781 625 NGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 702 (1228)
Q Consensus 625 ~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~~ 702 (1228)
.++.|||.-... .+++++.. +++ ..+.+...+ ...+.|+++| .+|.||+++.
T Consensus 212 -----------~~g~ly~td~~~~~~I~r~~~----dG~----------~~~~~~~~~-~~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 212 -----------MEGTIYWTDWGNTPRIEASSM----DGS----------GRRIIADTH-LFWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp -----------TTTEEEEEECSSSCEEEEEET----TSC----------SCEEEECSS-CSCEEEEEEEGGGTEEEEEET
T ss_pred -----------CCCeEEEeccCCCCEEEEEeC----CCC----------CcEEEEECC-CCCeeeEEEeCCCCEEEEEEC
Confidence 567899998776 67888864 222 112222222 2458999999 7999999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
..+.|.+++.+ +. +...+.. ..+.+|+||+++ ++.||+...
T Consensus 266 ~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~ 306 (386)
T 3v65_B 266 KHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDW 306 (386)
T ss_dssp TTTEEEEECTT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEET
T ss_pred CCCEEEEEeCC-CC----eeEEEEE--CCCCCceEEEEE-CCEEEEeeC
Confidence 99999999987 42 3344432 347899999995 668999873
No 35
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.74 E-value=2.9e-07 Score=98.51 Aligned_cols=185 Identities=12% Similarity=0.146 Sum_probs=118.6
Q ss_pred EEEEEEEeCCCcEEE-EeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEE
Q psy11781 919 SVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 919 SV~~v~iD~~grLWV-LDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
.+.++.+|++|+||| .|++.. +|.+||..+.+.. .++.. .......|++| .++.+|
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~------------~i~~~~~~~~~~~---~~~~~---~~~~p~~i~~~-----~~g~l~ 81 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG------------RVVKLATGSTGTT---VLPFN---GLYQPQGLAVD-----GAGTVY 81 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC------------EEEEECC-----E---ECCCC---SCCSCCCEEEC-----TTCCEE
T ss_pred CccceEECCCCCEEEEccCCCC------------cEEEecCCCcccc---eEeeC---CcCCcceeEEC-----CCCCEE
Confidence 889999999999999 887643 6888998776543 12111 12345668887 345699
Q ss_pred EEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCc
Q psy11781 998 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 1077 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~ 1077 (1228)
++|. ..+|.+||..++..+.+.. .+ ...+.+|+
T Consensus 82 v~~~-~~~i~~~d~~~~~~~~~~~--------------~~-----~~~p~~i~--------------------------- 114 (270)
T 1rwi_B 82 VTDF-NNRVVTLAAGSNNQTVLPF--------------DG-----LNYPEGLA--------------------------- 114 (270)
T ss_dssp EEET-TTEEEEECTTCSCCEECCC--------------CS-----CSSEEEEE---------------------------
T ss_pred EEcC-CCEEEEEeCCCceEeeeec--------------CC-----cCCCcceE---------------------------
Confidence 9998 7899999988765443211 00 01222333
Q ss_pred cccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeE
Q psy11781 1078 NVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSV 1157 (1228)
Q Consensus 1078 ~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI 1157 (1228)
++++++ ||+.-..+..+++++..-... ......+ .....++++|++|+||+++...+.|
T Consensus 115 -----~~~~g~-l~v~~~~~~~i~~~~~~~~~~--------------~~~~~~~-~~~p~~i~~~~~g~l~v~~~~~~~i 173 (270)
T 1rwi_B 115 -----VDTQGA-VYVADRGNNRVVKLAAGSKTQ--------------TVLPFTG-LNDPDGVAVDNSGNVYVTDTDNNRV 173 (270)
T ss_dssp -----ECTTCC-EEEEEGGGTEEEEECTTCCSC--------------EECCCCS-CCSCCCEEECTTCCEEEEEGGGTEE
T ss_pred -----ECCCCC-EEEEECCCCEEEEEECCCcee--------------Eeecccc-CCCceeEEEeCCCCEEEEECCCCEE
Confidence 444565 888877777788884321100 0000111 1246789999999999999999999
Q ss_pred EEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeC
Q psy11781 1158 GCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1158 ~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
.+|+++ +.. ........+..|.++++|++|+|||.+.
T Consensus 174 ~~~~~~-~~~------~~~~~~~~~~~p~~i~~d~~g~l~v~~~ 210 (270)
T 1rwi_B 174 VKLEAE-SNN------QVVLPFTDITAPWGIAVDEAGTVYVTEH 210 (270)
T ss_dssp EEECTT-TCC------EEECCCSSCCSEEEEEECTTCCEEEEET
T ss_pred EEEecC-CCc------eEeecccCCCCceEEEECCCCCEEEEEC
Confidence 999998 321 1111223467899999999999999983
No 36
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.74 E-value=0.00088 Score=84.12 Aligned_cols=190 Identities=17% Similarity=0.216 Sum_probs=108.6
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEE
Q psy11781 918 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 918 vSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
..|..+..|+.|+|||--. . -|..||.++++..+....+... .....+..|..| .++.++
T Consensus 450 ~~v~~i~~d~~g~lwigt~---~-----------Gl~~~~~~~~~~~~~~~~~~~~-~~~~~i~~i~~d-----~~g~lW 509 (781)
T 3v9f_A 450 LDVRVFYEDKNKKIWIGTH---A-----------GVFVIDLASKKVIHHYDTSNSQ-LLENFVRSIAQD-----SEGRFW 509 (781)
T ss_dssp CCEEEEEECTTSEEEEEET---T-----------EEEEEESSSSSCCEEECTTTSS-CSCSCEEEEEEC-----TTCCEE
T ss_pred CeEEEEEECCCCCEEEEEC---C-----------ceEEEeCCCCeEEecccCcccc-cccceeEEEEEc-----CCCCEE
Confidence 3577889999999999532 1 4899999998875433332111 113445667766 567889
Q ss_pred EEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCc
Q psy11781 998 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 1077 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~ 1077 (1228)
|+-.+ .||..||.++++..++....-.+ .+-+..|+
T Consensus 510 igt~~-~Gl~~~~~~~~~~~~~~~~~~l~----------------~~~i~~i~--------------------------- 545 (781)
T 3v9f_A 510 IGTFG-GGVGIYTPDMQLVRKFNQYEGFC----------------SNTINQIY--------------------------- 545 (781)
T ss_dssp EEESS-SCEEEECTTCCEEEEECTTTTCS----------------CSCEEEEE---------------------------
T ss_pred EEEcC-CCEEEEeCCCCeEEEccCCCCCC----------------CCeeEEEE---------------------------
Confidence 97543 58999999988766653210000 00111222
Q ss_pred cccceecCCCceEEEEeCCCCce-EEEecchhcCCcccCCccccccceEEecc-ccC-CCCcccEEEcCCCcEEEEecCC
Q psy11781 1078 NVDKTIRDDQRYMYFHSLSSNRH-YYVSTTDLRNSSRYVNSSDIDEYFHYLGS-RFR-NTQASASAINSNGVMFYNLVTK 1154 (1228)
Q Consensus 1078 ~~di~ls~d~r~LYf~plss~~l-y~V~T~~Lr~~~~~~~~~~~~~~v~~lG~-rg~-~sqs~g~~~D~~G~LY~t~~~~ 1154 (1228)
.++++ .|++....| + ++.+.+ . ..++.+.. .|. .....+++.|++|+|+++. .
T Consensus 546 -----~d~~g-~lWi~T~~G--lv~~~d~~---~-----------~~~~~~~~~~gl~~~~i~~i~~d~~g~lW~~t--~ 601 (781)
T 3v9f_A 546 -----RSSKG-QMWLATGEG--LVCFPSAR---N-----------FDYQVFQRKEGLPNTHIRAISEDKNGNIWAST--N 601 (781)
T ss_dssp -----ECTTS-CEEEEETTE--EEEESCTT---T-----------CCCEEECGGGTCSCCCCCEEEECSSSCEEEEC--S
T ss_pred -----ECCCC-CEEEEECCC--ceEEECCC---C-----------CcEEEccccCCCCCceEEEEEECCCCCEEEEc--C
Confidence 12233 366655422 4 544321 0 11222322 121 1235678999999999995 5
Q ss_pred CeEEEEeCCCCccccCCeeEEEecCCcee---c-CCceEEeCCCcEEEEeC
Q psy11781 1155 HSVGCWNTKTKVYLPQTQDIVQTSRDILN---F-PNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1155 ~aI~~wn~~~~~~~~~n~~~v~~~~~~L~---w-Pd~l~id~dg~Lyvlsn 1201 (1228)
++|.|++++++.+ ...... +.|+ | +.++..+++|.||+-+.
T Consensus 602 ~Gl~~~~~~~~~~-----~~~~~~-dGl~~~~f~~~~~~~~~~G~l~~g~~ 646 (781)
T 3v9f_A 602 TGISCYITSKKCF-----YTYDHS-NNIPQGSFISGCVTKDHNGLIYFGSI 646 (781)
T ss_dssp SCEEEEETTTTEE-----EEECGG-GTCCSSCEEEEEEEECTTSCEEEEET
T ss_pred CceEEEECCCCce-----EEeccc-CCccccccccCceEECCCCEEEEECC
Confidence 7899999984332 222221 1221 1 24566788999999874
No 37
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.74 E-value=0.0013 Score=82.62 Aligned_cols=258 Identities=12% Similarity=0.190 Sum_probs=131.6
Q ss_pred hhhhcCc-cccccccc--eeeEcCCCeEEEeccCCCeeEEEeCCCCcccccccceeec--cccee--ecCcceeeeCCCe
Q psy11781 233 YFHYLGS-RFRNTQAS--ASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQT--SRDIL--NFPNDLKIDPNDN 305 (1228)
Q Consensus 233 ~v~~~G~-rg~~sqs~--~~~~d~~Gvi~f~~v~~~aI~cwn~~~~~~~~~~~~~v~~--~~~~l--~~p~~l~i~~~g~ 305 (1228)
.|+.++. .|. +|.. .+.-|++|.|++|- ++.+.+||-.+ + ..+-.+ +...| ..+..|..|.+|.
T Consensus 30 ~f~~~~~~~gL-s~n~v~~I~qD~~G~lWigT--~~GL~ryDG~~-f-----~~~~~~~~~~~~l~~n~I~~i~~d~~g~ 100 (795)
T 4a2l_A 30 TFSYISINEGL-SQSTVFSIDQDKRGNMWFAT--YDGVNKYDGYA-F-----TVYQHNEDDPNSIANDISRIVKTDSQGR 100 (795)
T ss_dssp CCEEESGGGTC-SSSCEEEEEECTTSCEEEEE--TTEEEEECSSC-E-----EEECCCTTCTTSCSCSCEEEEEECTTSC
T ss_pred eEEEccccCCC-ccceeEEEEEcCCCCEEEee--cCcCcccCCCc-e-----EEEeCCCCCCCcccccceeEEEECCCCC
Confidence 3555663 343 3333 44559999999996 58999999875 2 111111 11111 2355677889999
Q ss_pred EEEEecc-ccchhcccCCCceeeEEEEEecccccccCCCCCCCCCcccccCCCCCeeeccCCCCcccCCCCceEEEEEee
Q psy11781 306 IWILSNK-LHQYLYGFLDFNVYNYRILVANSNDISNAGPARPSTDQTKSFHPSVPSIYPSVPSNAYPSSSHFQVVFRWKI 384 (1228)
Q Consensus 306 lw~~sn~-l~~~~~~~l~~~~~n~ri~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~v~~Wk~ 384 (1228)
||+-++. |- .+|...-.|+.+......- . + .|-+|+..-=........ .-++.|..
T Consensus 101 lWigT~~Gl~-----~yd~~~~~f~~~~~~~~~~-----------~--~---~i~~i~~d~~g~lwi~t~--~gl~~~~~ 157 (795)
T 4a2l_A 101 VWIGTRDGLS-----RYDEEKDIFQNFFYEKNGK-----------H--L---QVNGIEEISPEQLLISTP--EGLIMFDI 157 (795)
T ss_dssp EEEEESSCEE-----EEETTTTEEEEECCEETTE-----------E--C---CCCEEEEEETTEEEEEET--TEEEEEET
T ss_pred EEEEeCCchh-----eeCCCCCeEEeccccccCC-----------C--c---eEEEEEECCCCCEEEEEC--CceEEEEC
Confidence 9999863 22 2344444455554221100 0 0 011222110000000000 22344431
Q ss_pred e--eeecCCHHHHHhhccCCCcccCCCcccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCC
Q psy11781 385 M--DFVFRDNKQKANLIRSNKFIPENNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDD 461 (1228)
Q Consensus 385 l--df~~p~~~~r~~ai~~g~y~p~n~~P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~ 461 (1228)
- .|.- +..+ .+.+.....+... +|++++..- ..| |..+... ...+++|+...
T Consensus 158 ~~~~~~~---------~~~~--~~~~~~i~~i~~d~~g~lwigt~--~~G----l~~~~~~----~~~~~~~~~~~---- 212 (795)
T 4a2l_A 158 KESKFID---------DSFS--TAMHKTIASTLYRQGDQIYIGTS--TDG----LYTYSIT----QKTFEKVIPIL---- 212 (795)
T ss_dssp TTTEEEC---------SSSC--HHHHTCCEEEEEEETTEEEEEES--SSC----EEEEETT----TCCEEECC-------
T ss_pred CCCEEEe---------ccCC--CCCCcceEEEEECCCCCEEEEEC--CCC----EEEEeCC----CCeEEEecCCC----
Confidence 1 1110 0000 0000002334443 799999752 223 5566542 12344553210
Q ss_pred CCCCcceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCc--ccccCCCceeEEEEeec
Q psy11781 462 SNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTA--QVFEGSLFSNIVTEVVE 539 (1228)
Q Consensus 462 ~~c~~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~--v~~~~S~l~di~VD~~~ 539 (1228)
.-..|..+..|..|+|||.-.+. .|..||.++++.. .+..+.. .......+.+|..|
T Consensus 213 ----~~~~i~~i~~d~~g~lwigt~~~-------------Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~d--- 271 (795)
T 4a2l_A 213 ----GTKQIQAILQQSPTRIWVATEGA-------------GLFLINPKTKEIK-NYLHSPSNPKSISSNYIRSLAMD--- 271 (795)
T ss_dssp -----CCCEEEEEEEETTEEEEEEBSS-------------CEEEEETTTTEEE-EECCCTTCTTSCSCSBEEEEEEC---
T ss_pred ----CCCeeEEEEEcCCCCEEEEECCC-------------CeEEEeCCCCeEE-EeecCCCCccccCCCeEEEEEEc---
Confidence 01346788899999999964321 1889999887754 3443321 01123446677776
Q ss_pred CCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCC
Q psy11781 540 DCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHP 572 (1228)
Q Consensus 540 ~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~ 572 (1228)
.++.++|.-.. ||.+||..+++..++.+.
T Consensus 272 --~~g~lWigt~~--Gl~~~~~~~~~~~~~~~~ 300 (795)
T 4a2l_A 272 --SQNRLWIGTFN--DLNIYHEGTDSFASYSSN 300 (795)
T ss_dssp --TTSCEEEEESS--CEEEEETTTTEEEEECCC
T ss_pred --CCCCEEEEeCC--hhheEcCCCCeEEEEecC
Confidence 57788887543 899999999887776643
No 38
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.71 E-value=4.8e-07 Score=100.06 Aligned_cols=247 Identities=9% Similarity=0.013 Sum_probs=142.0
Q ss_pred CCcccceEEe--CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 408 NNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 485 (1228)
Q Consensus 408 n~~P~gv~v~--~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLD 485 (1228)
..++.|...+ ++++|++=-. --+|..++... ..++.+.. . ..+..+..|++|+|||..
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~-----~~~i~~~d~~~----~~~~~~~~---------~--~~~~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIP-----AKKVCRWDSFT----KQVQRVTM---------D--APVSSVALRQSGGYVATI 71 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETT-----TTEEEEEETTT----CCEEEEEC---------S--SCEEEEEEBTTSSEEEEE
T ss_pred CccccCCeEECCCCEEEEEECC-----CCEEEEEECCC----CcEEEEeC---------C--CceEEEEECCCCCEEEEE
Confidence 4577788776 4777766422 12566666431 12222110 0 136778899999999975
Q ss_pred CCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeE-EEEEcCCC
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGL-IVYDFFKN 564 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gL-IVyDl~~g 564 (1228)
. -.|..||++++++......+.. .+...++++++| .++.+|+++...... .+.....+
T Consensus 72 ~--------------~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~di~~d-----~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 72 G--------------TKFCALNWKEQSAVVLATVDND--KKNNRFNDGKVD-----PAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp T--------------TEEEEEETTTTEEEEEEECCTT--CSSEEEEEEEEC-----TTSCEEEEEEECCSBTTBCCTTCE
T ss_pred C--------------CeEEEEECCCCcEEEEEecCCC--CCCCCCCCEEEC-----CCCCEEEecCCcccccccccCCCc
Confidence 2 1399999999887654444322 234568899998 467799988542100 00111223
Q ss_pred eEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEee
Q psy11781 565 TSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHS 644 (1228)
Q Consensus 565 ~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~ 644 (1228)
+.||+... +.... ...-.....||+++| ++++||+.-
T Consensus 131 ~l~~~d~~--------g~~~~---~~~~~~~pngi~~sp--------------------------------dg~~lyv~~ 167 (297)
T 3g4e_A 131 ALYSLFPD--------HHVKK---YFDQVDISNGLDWSL--------------------------------DHKIFYYID 167 (297)
T ss_dssp EEEEECTT--------SCEEE---EEEEESBEEEEEECT--------------------------------TSCEEEEEE
T ss_pred EEEEEECC--------CCEEE---EeeccccccceEEcC--------------------------------CCCEEEEec
Confidence 33333210 00000 000011234666655 788999988
Q ss_pred CCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeE
Q psy11781 645 LSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDI 724 (1228)
Q Consensus 645 lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~i 724 (1228)
....++++.+... .+..+ .. ...+..+... .+.++|+++|++|+||++....+.|.+||++++.+ +..
T Consensus 168 ~~~~~i~~~~~d~-~~G~~--~~---~~~~~~~~~~--~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~----~~~ 235 (297)
T 3g4e_A 168 SLSYSVDAFDYDL-QTGQI--SN---RRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKR----LQT 235 (297)
T ss_dssp GGGTEEEEEEECT-TTCCE--EE---EEEEEECCGG--GCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCE----EEE
T ss_pred CCCCcEEEEeccC-CCCcc--cC---cEEEEECCCC--CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceE----EEE
Confidence 7777787776321 12221 00 1112222221 13579999999999999999999999999973332 234
Q ss_pred EEecCCceecCCceEEc-CCC-cEEEEecCc
Q psy11781 725 VQTSRDILNFPNDLKID-PND-NIWILSNKL 753 (1228)
Q Consensus 725 V~~~d~~L~wPd~l~Id-~dg-~LyVlsnrl 753 (1228)
+.. . -..|..++++ +++ .|||++++-
T Consensus 236 i~~-p--~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 236 VKL-P--VDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEC-S--SSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEC-C--CCCceEEEEeCCCCCEEEEEcCCc
Confidence 432 1 1468889997 554 799999764
No 39
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.71 E-value=5.9e-05 Score=83.08 Aligned_cols=83 Identities=7% Similarity=0.035 Sum_probs=63.3
Q ss_pred EEEEEEEeCCC-cEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEE
Q psy11781 469 SVFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 547 (1228)
Q Consensus 469 sV~~v~iD~~g-RLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aY 547 (1228)
.++.+.++++| +||+.+.+.... ....+|.+||+.++++++++..+.. ...++++. ++.++|
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~------~~~~~v~~~d~~~~~~~~~~~~~~~-------~~~~~~s~----dg~~l~ 104 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKL------DKGGVVYRLDPVTLEVTQAIHNDLK-------PFGATINN----TTQTLW 104 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTT------EESEEEEEECTTTCCEEEEEEESSC-------CCSEEEET----TTTEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCC------CCCccEEEEcCCCCeEEEEEecCCC-------cceEEECC----CCCEEE
Confidence 46778888876 788988774321 1245799999999999998877432 45677772 456899
Q ss_pred EecCCCCeEEEEEcCCCeEEE
Q psy11781 548 VNDVFRYGLIVYDFFKNTSYR 568 (1228)
Q Consensus 548 ItDs~~~gLIVyDl~~g~swR 568 (1228)
+++.....|.+||.++++..+
T Consensus 105 v~~~~~~~v~~~d~~~~~~~~ 125 (353)
T 3vgz_A 105 FGNTVNSAVTAIDAKTGEVKG 125 (353)
T ss_dssp EEETTTTEEEEEETTTCCEEE
T ss_pred EEecCCCEEEEEeCCCCeeEE
Confidence 999988999999999988744
No 40
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.70 E-value=1.5e-06 Score=97.93 Aligned_cols=193 Identities=12% Similarity=0.102 Sum_probs=127.8
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCC---cEEEEEECCCCcccCCCcceeeEEEeecCCC
Q psy11781 917 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCD 992 (1228)
Q Consensus 917 lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td---~lir~y~~p~~~~~~~S~l~di~VD~~~~c~ 992 (1228)
+..+.++..|. .++||+.|.+.- +|..+|+.+. +...+ .++... ..-..|+||. .
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~------------~I~~~~~~g~~~~~~~~~-~~~~~~----~~p~glavd~----~ 87 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYDT-VISRDI----QAPDGLAVDW----I 87 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTT------------EEEEEEC--------CEE-EECSSC----SCCCEEEEET----T
T ss_pred CCceEEEEEEeCCCEEEEEECCCC------------cEEEEECCCCCCCcccEE-EEeCCC----CCcCEEEEee----c
Confidence 55678999996 579999998743 7999999872 22222 222221 2346788983 3
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccc
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
++.+|++|.....|.|+|+.......+... + + ....|
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~--------------~--~---~~P~~------------------------ 124 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N--G---SKPRA------------------------ 124 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEEC--------------T--T---CCEEE------------------------
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEEC--------------C--C---CCcce------------------------
Confidence 678999999999999999875432221110 0 0 01112
Q ss_pred cccCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEE
Q psy11781 1073 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 1150 (1228)
Q Consensus 1073 ~~~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t 1150 (1228)
|+++|.+++|||.-... .+++++.. +.+ ..+.+...+ -..+.|+++| .+|.||++
T Consensus 125 --------iavdp~~g~ly~~d~~~~~~I~~~~~----dG~----------~~~~~~~~~-~~~P~gla~d~~~~~lY~~ 181 (316)
T 1ijq_A 125 --------IVVDPVHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYWV 181 (316)
T ss_dssp --------EEEETTTTEEEEEECSSSCEEEEEET----TSC----------CEEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred --------EEeCCCCCEEEEEccCCCCeEEEEcC----CCC----------CeEEEEECC-CCCceEEEEeccCCEEEEE
Confidence 55666788999998764 67877753 222 112222211 1357899999 68899999
Q ss_pred ecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1151 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1151 ~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
+...+.|.+.|.+ +. +.++++.....+.+|.||+++ +++||+....
T Consensus 182 D~~~~~I~~~d~d-g~----~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~ 227 (316)
T 1ijq_A 182 DSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 227 (316)
T ss_dssp ETTTTEEEEEETT-SC----SCEEEEECTTTTSSEEEEEEE-TTEEEEEETT
T ss_pred ECCCCeEEEEecC-CC----ceEEEeecCCccCCcEEEEEE-CCEEEEEECC
Confidence 9999999999998 53 445666555578899999997 5799998843
No 41
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.69 E-value=5e-07 Score=100.15 Aligned_cols=188 Identities=12% Similarity=0.076 Sum_probs=117.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.+.++.+|++|+|||.+.|.. .|..||+. +++.. +.- ...-......+++++| .++.+|+
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~------------~v~~~~~~-g~~~~-~~~-~~~~~~~~~~~~i~~d-----~dG~l~~ 146 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRR------------AITRSDAD-GQAHL-LVG-RYAGKRLNSPNDLIVA-----RDGAIWF 146 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTT------------EEEEECTT-SCEEE-EEC-EETTEECSCCCCEEEC-----TTSCEEE
T ss_pred ccceeeECCCCCEEEEECCCC------------EEEEECCC-CCEEE-EEe-ccCCCccCCCCCEEEC-----CCCCEEE
Confidence 367889999999999998753 38899986 66432 221 1111223457899998 5788999
Q ss_pred ecCC-----------------CCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccC
Q psy11781 549 NDVF-----------------RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKR 611 (1228)
Q Consensus 549 tDs~-----------------~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~ 611 (1228)
||+. ..+|.+||.++++..++. .+ ....||+++|
T Consensus 147 td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------------------~~---~~p~gl~~sp-------- 197 (305)
T 3dr2_A 147 TDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------------------DL---DHPNGLAFSP-------- 197 (305)
T ss_dssp ECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------------------EE---SSEEEEEECT--------
T ss_pred eCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------------------cC---CCCcceEEcC--------
Confidence 9862 246777776665443321 01 1234666665
Q ss_pred CCccccccccccccCccccccccCCCceEEEeeCCC-----CceEEEechhhcCCCCCCCccccccceEeeccccccccc
Q psy11781 612 HPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSS-----NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQA 686 (1228)
Q Consensus 612 ~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss-----~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs 686 (1228)
|+++||+..... ..+++++..- ..+ . ..+.+.+.+ .+.+
T Consensus 198 ------------------------dg~~lyv~~~~~~~~~~~~i~~~~~~~---~~l--~------~~~~~~~~~-~~~p 241 (305)
T 3dr2_A 198 ------------------------DEQTLYVSQTPEQGHGSVEITAFAWRD---GAL--H------DRRHFASVP-DGLP 241 (305)
T ss_dssp ------------------------TSSEEEEEECCC---CCCEEEEEEEET---TEE--E------EEEEEECCS-SSCC
T ss_pred ------------------------CCCEEEEEecCCcCCCCCEEEEEEecC---CCc--c------CCeEEEECC-CCCC
Confidence 778899987652 4566665321 001 0 001111111 2357
Q ss_pred cceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCC-cEEEEecC
Q psy11781 687 SASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPND-NIWILSNK 752 (1228)
Q Consensus 687 ~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg-~LyVlsnr 752 (1228)
+|+++|++|+||++. .+.|.+|+++ +. .+..+.. ++ .|..+.+++++ .|||.+++
T Consensus 242 dgi~~d~~G~lwv~~--~~gv~~~~~~-g~----~~~~~~~-~~---~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 242 DGFCVDRGGWLWSSS--GTGVCVFDSD-GQ----LLGHIPT-PG---TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp CSEEECTTSCEEECC--SSEEEEECTT-SC----EEEEEEC-SS---CCCEEEECTTSCEEEEEETT
T ss_pred CeEEECCCCCEEEec--CCcEEEECCC-CC----EEEEEEC-CC---ceeEEEEeCCCCEEEEEcCC
Confidence 999999999999998 5679999998 43 2344432 22 48889998666 69998864
No 42
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.69 E-value=1.3e-06 Score=100.04 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=131.0
Q ss_pred cceEEEEEEEe-CCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCce
Q psy11781 916 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 994 (1228)
Q Consensus 916 ~lvSV~~v~iD-~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~ 994 (1228)
.+..+.++..| ..++||+.|...- +|..+++.+..+...+ ...+ ..-..|+||. .++
T Consensus 71 ~~~~~~~l~~d~~~~~ly~~D~~~~------------~I~r~~~~g~~~~~~~--~~~~----~~p~glavd~----~~g 128 (349)
T 3v64_C 71 NLENAIALDFHHRRELVFWSDVTLD------------RILRANLNGSNVEEVV--STGL----ESPGGLAVDW----VHD 128 (349)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT------------EEEEEETTSCSCEEEE--CSSC----SCCCEEEEET----TTT
T ss_pred CCCceEEEEEeccccEEEEEeccCC------------ceEEEecCCCCceEEE--eCCC----CCccEEEEec----CCC
Confidence 35568899999 5789999998753 7999999887643321 1111 2346789984 368
Q ss_pred EEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccc
Q psy11781 995 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 1074 (1228)
Q Consensus 995 ~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~ 1074 (1228)
.+|++|.+...|.|+++.... .+++ +.+. + ....|
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~-~~~l--------------~~~~-l---~~P~~-------------------------- 163 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAH-RKVL--------------LWQS-L---EKPRA-------------------------- 163 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEE--------------ECTT-C---SCEEE--------------------------
T ss_pred eEEEEcCCCCeEEEEcCCCCc-eEEE--------------EeCC-C---CCcce--------------------------
Confidence 999999999999999987532 2211 0000 0 01112
Q ss_pred cCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEec
Q psy11781 1075 NGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 1152 (1228)
Q Consensus 1075 ~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~ 1152 (1228)
|+++|.++.|||.-... .+++++... .+ ..+.+...+ -..+.|+++| .+|.||+++.
T Consensus 164 ------iavdp~~g~ly~td~~~~~~I~r~~~d----G~----------~~~~~~~~~-~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 164 ------IALHPMEGTIYWTDWGNTPRIEASSMD----GS----------GRRIIADTH-LFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp ------EEEETTTTEEEEEECSSSCEEEEEETT----SC----------SCEESCCSS-CSCEEEEEEETTTTEEEEEET
T ss_pred ------EEEecCcCeEEEeccCCCCEEEEEeCC----CC----------CcEEEEECC-CCCcceEEEeCCCCEEEEEEC
Confidence 56667788999998777 788888642 11 112222222 1347899999 7899999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCch
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLH 1204 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~ 1204 (1228)
..+.|.+++.+ +. +..++.. ..+.+|+||+++ ++.||+..-.-+
T Consensus 223 ~~~~I~~~~~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~~~~ 266 (349)
T 3v64_C 223 KHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWHTK 266 (349)
T ss_dssp TTTEEEEEETT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETTTT
T ss_pred CCCEEEEEeCC-CC----ceEEEEe--CCCCCceEEEEE-CCEEEEecCCCC
Confidence 99999999998 53 3344443 348899999995 679999875443
No 43
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.68 E-value=1.5e-06 Score=94.26 Aligned_cols=188 Identities=10% Similarity=0.058 Sum_probs=124.7
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeE
Q psy11781 467 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 545 (1228)
Q Consensus 467 lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~ 545 (1228)
...+.++.+|. .++||+.|.+. .+|.++|+.+..+... ++. .......|++|. .++.
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~------------~~I~~~~~~g~~~~~~--~~~----~~~~p~~ia~d~----~~~~ 92 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISE------------PSIGRASLHGGEPTTI--IRQ----DLGSPEGIALDH----LGRT 92 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTT------------TEEEEEESSSCCCEEE--ECT----TCCCEEEEEEET----TTTE
T ss_pred CCcEEEEEEecCCCEEEEEECCC------------CEEEEEecCCCCcEEE--EEC----CCCCccEEEEEe----cCCe
Confidence 35678999997 67999999874 3599999987654322 221 124567899982 3689
Q ss_pred EEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccccc
Q psy11781 546 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 625 (1228)
Q Consensus 546 aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~ 625 (1228)
+|++|.....|.++|+.......+.. .+ .....|||++
T Consensus 93 lyv~d~~~~~I~~~~~~g~~~~~~~~--------------~~-----~~~P~~i~vd----------------------- 130 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGTQRRVLFD--------------TG-----LVNPRGIVTD----------------------- 130 (267)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC--------------SS-----CSSEEEEEEE-----------------------
T ss_pred EEEEECCCCEEEEEEcCCCCEEEEEE--------------CC-----CCCccEEEEe-----------------------
Confidence 99999999999999986532111110 00 0123355554
Q ss_pred CccccccccCCCceEEEeeCC--CCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEcc-CCcEEEEcC
Q psy11781 626 GTNVDKTIRDDQRYMYFHSLS--SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNLV 702 (1228)
Q Consensus 626 ~~~~~i~is~d~r~LYf~~ls--s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~-~G~LY~t~~ 702 (1228)
++++.||+.-.. +.+++++.. +... .+.+...+ ...+.|+++|. .+.||+++.
T Consensus 131 ---------~~~g~lyv~~~~~~~~~I~~~~~----dg~~----------~~~~~~~~-~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 131 ---------PVRGNLYWTDWNRDNPKIETSHM----DGTN----------RRILAQDN-LGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp ---------TTTTEEEEEECCSSSCEEEEEET----TSCC----------CEEEECTT-CSCEEEEEEETTTTEEEEEET
T ss_pred ---------eCCCEEEEEECCCCCcEEEEEec----CCCC----------cEEEEECC-CCCCcEEEEcCCCCEEEEEEC
Confidence 466789998876 456776653 2221 11122112 24689999996 579999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
..+.|.+++++ +. ....+.. .+.+|.+++++ +++|||...
T Consensus 187 ~~~~I~~~~~~-g~----~~~~~~~---~~~~P~gi~~d-~~~lyva~~ 226 (267)
T 1npe_A 187 GTHRAECLNPA-QP----GRRKVLE---GLQYPFAVTSY-GKNLYYTDW 226 (267)
T ss_dssp TTTEEEEEETT-EE----EEEEEEE---CCCSEEEEEEE-TTEEEEEET
T ss_pred CCCEEEEEecC-CC----ceEEEec---CCCCceEEEEe-CCEEEEEEC
Confidence 99999999998 42 2223322 46789999998 689999763
No 44
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.68 E-value=1.7e-06 Score=94.74 Aligned_cols=230 Identities=7% Similarity=-0.046 Sum_probs=137.4
Q ss_pred CCcccceEEe-CCe-EEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 858 NNLPLGIGIW-RST-IFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 935 (1228)
Q Consensus 858 n~~p~gv~v~-~gR-iFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLD 935 (1228)
...|.|+++. +|+ ++++--+ . -+|..++.. ++ .+.|.. ....+.++.+|.+|+|||.+
T Consensus 27 ~~~~eg~~~d~~g~~l~~~~~~--~---~~i~~~~~~--~~---~~~~~~----------~~~~~~~l~~~~dg~l~v~~ 86 (296)
T 3e5z_A 27 FTWTEGPVYVPARSAVIFSDVR--Q---NRTWAWSDD--GQ---LSPEMH----------PSHHQNGHCLNKQGHLIACS 86 (296)
T ss_dssp CSSEEEEEEEGGGTEEEEEEGG--G---TEEEEEETT--SC---EEEEES----------SCSSEEEEEECTTCCEEEEE
T ss_pred CccccCCeEeCCCCEEEEEeCC--C---CEEEEEECC--CC---eEEEEC----------CCCCcceeeECCCCcEEEEe
Confidence 3467788886 555 5554322 1 256666642 21 233321 01236789999999999999
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-------------
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------------- 1002 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~------------- 1002 (1228)
.|.. .|.+||++++++......... ......+++++| .++.+|+||+.
T Consensus 87 ~~~~------------~i~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d-----~~G~l~vtd~~~g~~~~~~~~~~~ 147 (296)
T 3e5z_A 87 HGLR------------RLERQREPGGEWESIADSFEG--KKLNSPNDVCLA-----PDGSLWFSDPTYGIDKPEEGYGGE 147 (296)
T ss_dssp TTTT------------EEEEECSTTCCEEEEECEETT--EECCCCCCEEEC-----TTSCEEEEECSHHHHCGGGSSCCC
T ss_pred cCCC------------eEEEEcCCCCcEEEEeeccCC--CCCCCCCCEEEC-----CCCCEEEECCcccccccccccccc
Confidence 8753 699999999987543221111 123456789998 46789999872
Q ss_pred ----CCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 1003 ----RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 1003 ----~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
..+|..+|.. ++..++... .....|
T Consensus 148 ~~~~~~~l~~~~~~-g~~~~~~~~--------------------~~~~~g------------------------------ 176 (296)
T 3e5z_A 148 MELPGRWVFRLAPD-GTLSAPIRD--------------------RVKPNG------------------------------ 176 (296)
T ss_dssp CCSSSCEEEEECTT-SCEEEEECC--------------------CSSEEE------------------------------
T ss_pred ccCCCcEEEEECCC-CCEEEeecC--------------------CCCCcc------------------------------
Confidence 2356666655 443332110 000112
Q ss_pred ccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEE
Q psy11781 1079 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVG 1158 (1228)
Q Consensus 1079 ~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~ 1158 (1228)
|++||+++.| +......++++.+.+ .+.. +....+.+ +.. .+...|+++|++|+||++. .+.|.
T Consensus 177 --i~~s~dg~~l-v~~~~~~~i~~~~~~--~~g~-------~~~~~~~~-~~~-~~~p~~i~~d~~G~l~v~~--~~~v~ 240 (296)
T 3e5z_A 177 --LAFLPSGNLL-VSDTGDNATHRYCLN--ARGE-------TEYQGVHF-TVE-PGKTDGLRVDAGGLIWASA--GDGVH 240 (296)
T ss_dssp --EEECTTSCEE-EEETTTTEEEEEEEC--SSSC-------EEEEEEEE-CCS-SSCCCSEEEBTTSCEEEEE--TTEEE
T ss_pred --EEECCCCCEE-EEeCCCCeEEEEEEC--CCCc-------CcCCCeEe-eCC-CCCCCeEEECCCCCEEEEc--CCeEE
Confidence 4556688888 777777778887743 1111 10011222 211 2347899999999999999 78999
Q ss_pred EEeCCCCccccCCeeEEEecCCceecCCceEEe-CCC-cEEEEeCC
Q psy11781 1159 CWNTKTKVYLPQTQDIVQTSRDILNFPNDLKID-PND-NIWILSNK 1202 (1228)
Q Consensus 1159 ~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id-~dg-~Lyvlsn~ 1202 (1228)
+||++ +.. +..+.. ... |..++++ ++| .||+.++.
T Consensus 241 ~~~~~-g~~----~~~~~~-~~~---~~~~~f~~~d~~~L~v~t~~ 277 (296)
T 3e5z_A 241 VLTPD-GDE----LGRVLT-PQT---TSNLCFGGPEGRTLYMTVST 277 (296)
T ss_dssp EECTT-SCE----EEEEEC-SSC---CCEEEEESTTSCEEEEEETT
T ss_pred EECCC-CCE----EEEEEC-CCC---ceeEEEECCCCCEEEEEcCC
Confidence 99998 542 233332 222 8888884 555 69998853
No 45
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.68 E-value=3e-06 Score=91.17 Aligned_cols=225 Identities=11% Similarity=0.137 Sum_probs=135.1
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEE
Q psy11781 917 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 996 (1228)
Q Consensus 917 lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~a 996 (1228)
+..+.++.+|.+|+|||.+.+.. .|..||+. +++ +.+.++.. ......|++| .++.+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~------------~v~~~d~~-~~~-~~~~~~~~----~~~~~~i~~~-----~~g~l 70 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKAN------------MISCINLD-GKI-TEYPLPTP----DAKVMCLTIS-----SDGEV 70 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTT------------EEEEECTT-CCE-EEEECSST----TCCEEEEEEC-----TTSCE
T ss_pred CCCccceEECCCCCEEEEecCCC------------cEEEEcCC-CCe-EEecCCcc----cCceeeEEEC-----CCCCE
Confidence 46789999999999999987532 69999998 654 45666532 2456778887 46789
Q ss_pred EEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEE--cCEEEEeeCCcccee-cCccccccccCCCcccccccccc
Q psy11781 997 YVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYIL--DNLKFRWVDGIFGMA-ISPELSGKYKRHPYEYYHYNVHH 1073 (1228)
Q Consensus 997 YItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i--~G~~f~~~dGi~Gia-Lsp~~~~~~~~~p~~~~~~~~~~ 1073 (1228)
|+++....+|.+||.+ ++..++..+.-...|. .+.+ +|.-+--..+--++. +.+ . . ....+.. .
T Consensus 71 ~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~--~i~~~~~g~l~v~~~~~~~i~~~d~-~-g-------~~~~~~~-~ 137 (299)
T 2z2n_A 71 WFTENAANKIGRITKK-GIIKEYTLPNPDSAPY--GITEGPNGDIWFTEMNGNRIGRITD-D-G-------KIREYEL-P 137 (299)
T ss_dssp EEEETTTTEEEEECTT-SCEEEEECSSTTCCEE--EEEECTTSCEEEEETTTTEEEEECT-T-C-------CEEEEEC-S
T ss_pred EEeCCCCCeEEEECCC-CcEEEEeCCCcCCCce--eeEECCCCCEEEEecCCceEEEECC-C-C-------CEEEecC-C
Confidence 9999988899999987 5555544221111111 1222 222111010000111 111 0 0 0001100 0
Q ss_pred ccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEec
Q psy11781 1074 YNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLV 1152 (1228)
Q Consensus 1074 ~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~ 1152 (1228)
....... |++++++ .||+....+..+++++. +..+ . .+. + ..+ .....++++|++|.||++..
T Consensus 138 ~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~----~g~~-------~-~~~-~-~~~-~~~~~~i~~~~~g~l~v~~~ 201 (299)
T 2z2n_A 138 NKGSYPSFITLGSDN-ALWFTENQNNAIGRITE----SGDI-------T-EFK-I-PTP-ASGPVGITKGNDDALWFVEI 201 (299)
T ss_dssp STTCCEEEEEECTTS-CEEEEETTTTEEEEECT----TCCE-------E-EEE-C-SST-TCCEEEEEECTTSSEEEEET
T ss_pred CCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC----CCcE-------E-Eee-C-CCC-CCcceeEEECCCCCEEEEcc
Confidence 0011223 7888887 58888776677888864 2221 0 011 1 111 12367899999999999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEe
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 1200 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvls 1200 (1228)
..+.|.+|++. +.+. .+. .......|.++++|++|.|||.+
T Consensus 202 ~~~~i~~~~~~-g~~~-----~~~-~~~~~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 202 IGNKIGRITTS-GEIT-----EFK-IPTPNARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp TTTEEEEECTT-CCEE-----EEE-CSSTTCCEEEEEECSTTCEEEEE
T ss_pred CCceEEEECCC-CcEE-----EEE-CCCCCCCceeEEECCCCCEEEec
Confidence 89999999985 5432 222 22345689999999999999996
No 46
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.67 E-value=3.7e-07 Score=99.72 Aligned_cols=249 Identities=6% Similarity=0.009 Sum_probs=147.2
Q ss_pred cccceEEe-CCeEEEEcccCC--CCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCC-CcEEEEe
Q psy11781 410 LPLGIGIW-RSTIFLSFPKWK--AGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC-DRLWIMD 485 (1228)
Q Consensus 410 ~P~gv~v~-~gRiFvt~PR~~--~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~-gRLWVLD 485 (1228)
.|.++++. +|+++++.|+-. ....-+|..++.. ++.++.+..-. .......+.++.+|++ |+|||.+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~----~g~~~~~~~~~-----~~~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK----TGKKTVICKPE-----VNGYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT----TCCEEEEECCE-----ETTEECCEEEEEECSSSSEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC----CCcEEEEEecc-----cCCCCCCCceEEEecCCCcEEEEE
Confidence 57888886 689999844210 0011246666532 12333332100 0011245789999999 9999999
Q ss_pred CCCCCcccCcCccCCCEEEEEECCCCcEEEE-EECCCcccccCCCceeEEEEeecCCCCeEEEEecCCC-----------
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRK-YILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----------- 553 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~td~vi~~-y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~----------- 553 (1228)
.+. .|.+||++ +++.+. ..... .......++|++| .++.+|+++...
T Consensus 90 ~~~-------------~l~~~d~~-g~~~~~~~~~~~--~~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 90 MRL-------------GLLVVQTD-GTFEEIAKKDSE--GRRMQGCNDCAFD-----YEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp TTT-------------EEEEEETT-SCEEECCSBCTT--SCBCBCCCEEEEC-----TTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCC-------------CEEEEeCC-CCEEEEEeccCC--CccccCCcCEEEC-----CCCCEEEEecCcccccccccccc
Confidence 752 39999998 776532 22111 1223457889998 567899999764
Q ss_pred ----CeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccc
Q psy11781 554 ----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 629 (1228)
Q Consensus 554 ----~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1228)
.+|.++|.. ++..++.. . .....||+++.
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~~-----------------~---~~~~~~i~~~~-------------------------- 181 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVDT-----------------A---FQFPNGIAVRH-------------------------- 181 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEEE-----------------E---ESSEEEEEEEE--------------------------
T ss_pred cCCCCeEEEECCC-CCEEEecc-----------------C---CCCcceEEEec--------------------------
Confidence 577777765 44333210 0 01123455540
Q ss_pred cccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEE
Q psy11781 630 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGC 709 (1228)
Q Consensus 630 ~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~ 709 (1228)
..+++++.||+.......++.++.+ .+..+ .. ...+..+.... .+.+.++++|++|+||++....+.|.+
T Consensus 182 --~~d~dg~~l~v~~~~~~~i~~~~~~--~~g~~--~~---~~~~~~~~~~~-~~~p~~i~~d~~G~l~v~~~~~~~i~~ 251 (314)
T 1pjx_A 182 --MNDGRPYQLIVAETPTKKLWSYDIK--GPAKI--EN---KKVWGHIPGTH-EGGADGMDFDEDNNLLVANWGSSHIEV 251 (314)
T ss_dssp --CTTSCEEEEEEEETTTTEEEEEEEE--ETTEE--EE---EEEEEECCCCS-SCEEEEEEEBTTCCEEEEEETTTEEEE
T ss_pred --ccCCCCCEEEEEECCCCeEEEEECC--CCCcc--cc---ceEEEECCCCC-CCCCCceEECCCCCEEEEEcCCCEEEE
Confidence 0114677899987777778887643 11111 00 01111121110 024688999999999999988999999
Q ss_pred EeCCCCccCCCCeeEEEecCCceecCCceEEcCCCc-EEEEecC
Q psy11781 710 WNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNK 752 (1228)
Q Consensus 710 wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~-LyVlsnr 752 (1228)
||++++.. +..+.. ...+|.+++++++|. |||.+..
T Consensus 252 ~d~~~g~~----~~~~~~---~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 252 FGPDGGQP----KMRIRC---PFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp ECTTCBSC----SEEEEC---SSSCEEEEEECTTSSEEEEEETT
T ss_pred EcCCCCcE----eEEEeC---CCCCceeEEECCCCCEEEEEeCC
Confidence 99973332 233321 125789999999997 9998754
No 47
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.66 E-value=2.3e-06 Score=94.72 Aligned_cols=258 Identities=12% Similarity=0.075 Sum_probs=156.9
Q ss_pred CcccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCC
Q psy11781 409 NLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTG 487 (1228)
Q Consensus 409 ~~P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG 487 (1228)
..|.++++. +|++|++--. . -.|..++.+. +.++.+.. ..-..+.++..|++|+|||.+.+
T Consensus 45 ~~~~~~~~~~~g~l~~~~~~--~---~~i~~~d~~~----~~~~~~~~---------~~~~~~~~i~~~~dg~l~v~~~~ 106 (333)
T 2dg1_A 45 LQLEGLNFDRQGQLFLLDVF--E---GNIFKINPET----KEIKRPFV---------SHKANPAAIKIHKDGRLFVCYLG 106 (333)
T ss_dssp CCEEEEEECTTSCEEEEETT--T---CEEEEECTTT----CCEEEEEE---------CSSSSEEEEEECTTSCEEEEECT
T ss_pred ccccCcEECCCCCEEEEECC--C---CEEEEEeCCC----CcEEEEee---------CCCCCcceEEECCCCcEEEEeCC
Confidence 356888886 6889876321 1 2566665421 22222210 00134788899999999999876
Q ss_pred CCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC------CCeEEEEEc
Q psy11781 488 VTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVYDF 561 (1228)
Q Consensus 488 ~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~------~~gLIVyDl 561 (1228)
... ....|.+||++++++.+.+. .. ......+++++| .++.+|+++.. ..+|.++|.
T Consensus 107 ~~~--------~~~~i~~~d~~~~~~~~~~~--~~--~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~l~~~~~ 169 (333)
T 2dg1_A 107 DFK--------STGGIFAATENGDNLQDIIE--DL--STAYCIDDMVFD-----SKGGFYFTDFRGYSTNPLGGVYYVSP 169 (333)
T ss_dssp TSS--------SCCEEEEECTTSCSCEEEEC--SS--SSCCCEEEEEEC-----TTSCEEEEECCCBTTBCCEEEEEECT
T ss_pred CCC--------CCceEEEEeCCCCEEEEEEc--cC--ccCCcccceEEC-----CCCCEEEEeccccccCCCceEEEEeC
Confidence 421 12469999999988654322 11 134567889998 46789999875 356777777
Q ss_pred CCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEE
Q psy11781 562 FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMY 641 (1228)
Q Consensus 562 ~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LY 641 (1228)
.+++..++.. . .....||+++| +++.||
T Consensus 170 ~~~~~~~~~~-----------------~---~~~~~~i~~~~--------------------------------dg~~l~ 197 (333)
T 2dg1_A 170 DFRTVTPIIQ-----------------N---ISVANGIALST--------------------------------DEKVLW 197 (333)
T ss_dssp TSCCEEEEEE-----------------E---ESSEEEEEECT--------------------------------TSSEEE
T ss_pred CCCEEEEeec-----------------C---CCcccceEECC--------------------------------CCCEEE
Confidence 6655444321 0 01234556654 678899
Q ss_pred EeeCCCCceEEEechhhcCCCCCCCccccccc-eEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCC
Q psy11781 642 FHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEY-FHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQ 720 (1228)
Q Consensus 642 f~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~-v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~ 720 (1228)
+.......++.++.+. +... -...... +..+. + ...+.++++|++|+||++....+.|.+|+++ +.
T Consensus 198 v~~~~~~~i~~~d~~~--~g~~---~~~~~~~~~~~~~--~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~---- 264 (333)
T 2dg1_A 198 VTETTANRLHRIALED--DGVT---IQPFGATIPYYFT--G-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GY---- 264 (333)
T ss_dssp EEEGGGTEEEEEEECT--TSSS---EEEEEEEEEEECC--S-SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SC----
T ss_pred EEeCCCCeEEEEEecC--CCcC---cccccceEEEecC--C-CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CC----
Confidence 9876666677776421 1110 0000000 11111 1 1246889999999999999888999999997 43
Q ss_pred CeeEEEecC---CceecCCceEEcCCC-cEEEEecCccccccCCCCCccccEEEEEEec
Q psy11781 721 TQDIVQTSR---DILNFPNDLKIDPND-NIWILSNKLHQYLYGFLDFNVYNYRILVANS 775 (1228)
Q Consensus 721 n~~iV~~~d---~~L~wPd~l~Id~dg-~LyVlsnrl~~~~~~~~d~~e~nfrI~r~~v 775 (1228)
.+..+.... ..+.+|.+++++++| .|||.+++=. ....-.||++++
T Consensus 265 ~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g~---------~~~~~~l~~~~~ 314 (333)
T 2dg1_A 265 PIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDIE---------MGGGSMLYTVNG 314 (333)
T ss_dssp EEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECGG---------GTCCEEEEEEEC
T ss_pred EEEEEEcCCCccccccCcceEEECCCCCEEEEEeCccC---------CCCCceEEEEec
Confidence 223332111 124489999998886 7999887643 123567888875
No 48
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.66 E-value=1.3e-06 Score=101.41 Aligned_cols=191 Identities=12% Similarity=0.092 Sum_probs=129.8
Q ss_pred cceEEEEEEEe-CCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCce
Q psy11781 916 SLISVFRMSVD-KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 994 (1228)
Q Consensus 916 ~lvSV~~v~iD-~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~ 994 (1228)
.+..+.++..| ..++||+.|.+.- +|..+|+.+..+...+ .... ..-..|+||. .++
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~------------~I~r~~~~g~~~~~~~--~~~~----~~p~glavd~----~~g 171 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLD------------RILRANLNGSNVEEVV--STGL----ESPGGLAVDW----VHD 171 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT------------EEEEEETTSCCEEEEE--CSSC----SCCCCEEEET----TTT
T ss_pred CCCccEEEEEecCCCeEEEEeCCCC------------cEEEEecCCCCcEEEE--eCCC----CCccEEEEEe----CCC
Confidence 35568899999 5789999998753 7999999887654322 1111 2346789984 368
Q ss_pred EEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccc
Q psy11781 995 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 1074 (1228)
Q Consensus 995 ~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~ 1074 (1228)
.+|++|.+...|.|+++.... .+++ +.+. + ....|
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~-~~~l--------------~~~~-l---~~P~g-------------------------- 206 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAH-RKVL--------------LWQS-L---EKPRA-------------------------- 206 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCS-CEEE--------------ECSS-C---SCEEE--------------------------
T ss_pred eEEEEcCCCCeEEEEeCCCCc-eEEe--------------ecCC-C---CCCcE--------------------------
Confidence 999999999999998887432 2211 0000 0 01112
Q ss_pred cCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEec
Q psy11781 1075 NGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 1152 (1228)
Q Consensus 1075 ~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~ 1152 (1228)
|+++|.+++|||.-... .++++++.. .+ ..+.+...+. ..+.|+++| .+|.||+++.
T Consensus 207 ------iavdp~~g~ly~td~~~~~~I~r~~~d----G~----------~~~~~~~~~~-~~PnGlavd~~~~~lY~aD~ 265 (386)
T 3v65_B 207 ------IALHPMEGTIYWTDWGNTPRIEASSMD----GS----------GRRIIADTHL-FWPNGLTIDYAGRRMYWVDA 265 (386)
T ss_dssp ------EEEETTTTEEEEEECSSSCEEEEEETT----SC----------SCEEEECSSC-SCEEEEEEEGGGTEEEEEET
T ss_pred ------EEEEcCCCeEEEeccCCCCEEEEEeCC----CC----------CcEEEEECCC-CCeeeEEEeCCCCEEEEEEC
Confidence 56667788999998776 778888631 11 1122222221 347899999 7899999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
..+.|.+++.+ +. +...+.. ..+.+|+||+++ ++.||+..-.
T Consensus 266 ~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~giav~-~~~ly~td~~ 307 (386)
T 3v65_B 266 KHHVIERANLD-GS----HRKAVIS--QGLPHPFAITVF-EDSLYWTDWH 307 (386)
T ss_dssp TTTEEEEECTT-SC----SCEEEEC--SSCSSEEEEEEE-TTEEEEEETT
T ss_pred CCCEEEEEeCC-CC----eeEEEEE--CCCCCceEEEEE-CCEEEEeeCC
Confidence 99999999988 53 3344443 348899999995 5689998744
No 49
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.63 E-value=1e-06 Score=96.20 Aligned_cols=248 Identities=6% Similarity=0.024 Sum_probs=145.4
Q ss_pred cccceEEe-CCeEEEEeccCC--CCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCC-CcEEEEe
Q psy11781 860 LPLGIGIW-RSTIFLSFPKWK--AGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKC-DRLWIMD 935 (1228)
Q Consensus 860 ~p~gv~v~-~gRiFvt~PR~~--~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~-grLWVLD 935 (1228)
.|.++++. +|+++++.|+-. ....-+|..++.. .+ .++.+..-.. . .....+.++.+|.+ |+|||.+
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~-~g---~~~~~~~~~~--~---~~~~~~~~i~~~~~~g~l~v~~ 89 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLK-TG---KKTVICKPEV--N---GYGGIPAGCQCDRDANQLFVAD 89 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTT-TC---CEEEEECCEE--T---TEECCEEEEEECSSSSEEEEEE
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCC-CC---cEEEEEeccc--C---CCCCCCceEEEecCCCcEEEEE
Confidence 57788886 789998844210 0012245555431 11 2233211000 0 01235788999999 9999998
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEE-EECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCC-----------
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRK-YILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----------- 1003 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~-y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~----------- 1003 (1228)
.+. .|.+||++ +++.+. ...+. .......++|++| .++.+|+++...
T Consensus 90 ~~~-------------~l~~~d~~-g~~~~~~~~~~~--~~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~~~~ 148 (314)
T 1pjx_A 90 MRL-------------GLLVVQTD-GTFEEIAKKDSE--GRRMQGCNDCAFD-----YEGNLWITAPAGEVAPADYTRSM 148 (314)
T ss_dssp TTT-------------EEEEEETT-SCEEECCSBCTT--SCBCBCCCEEEEC-----TTSCEEEEECBCBCTTSCCCBTT
T ss_pred CCC-------------CEEEEeCC-CCEEEEEeccCC--CccccCCcCEEEC-----CCCCEEEEecCcccccccccccc
Confidence 742 59999999 876532 22111 1223457788888 467899999865
Q ss_pred ----CeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccc
Q psy11781 1004 ----YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 1079 (1228)
Q Consensus 1004 ----~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~ 1079 (1228)
.+|.++|.. ++..++.. + + ....|++++
T Consensus 149 ~~~~~~l~~~~~~-g~~~~~~~---------------~--~---~~~~~i~~~--------------------------- 180 (314)
T 1pjx_A 149 QEKFGSIYCFTTD-GQMIQVDT---------------A--F---QFPNGIAVR--------------------------- 180 (314)
T ss_dssp SSSCEEEEEECTT-SCEEEEEE---------------E--E---SSEEEEEEE---------------------------
T ss_pred cCCCCeEEEECCC-CCEEEecc---------------C--C---CCcceEEEe---------------------------
Confidence 578888766 54433210 0 0 011122222
Q ss_pred cceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCC-CCcccEEEcCCCcEEEEecCCCeEE
Q psy11781 1080 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRN-TQASASAINSNGVMFYNLVTKHSVG 1158 (1228)
Q Consensus 1080 di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~-sqs~g~~~D~~G~LY~t~~~~~aI~ 1158 (1228)
+..+++++.||+......++++++.+ .+..+ .. ...+..+... . ....++++|++|+||++....+.|.
T Consensus 181 -~~~d~dg~~l~v~~~~~~~i~~~~~~--~~g~~--~~---~~~~~~~~~~--~~~~p~~i~~d~~G~l~v~~~~~~~i~ 250 (314)
T 1pjx_A 181 -HMNDGRPYQLIVAETPTKKLWSYDIK--GPAKI--EN---KKVWGHIPGT--HEGGADGMDFDEDNNLLVANWGSSHIE 250 (314)
T ss_dssp -ECTTSCEEEEEEEETTTTEEEEEEEE--ETTEE--EE---EEEEEECCCC--SSCEEEEEEEBTTCCEEEEEETTTEEE
T ss_pred -cccCCCCCEEEEEECCCCeEEEEECC--CCCcc--cc---ceEEEECCCC--CCCCCCceEECCCCCEEEEEcCCCEEE
Confidence 00116788999988777778888643 11111 00 0111111111 1 2367899999999999998899999
Q ss_pred EEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEeCC
Q psy11781 1159 CWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNK 1202 (1228)
Q Consensus 1159 ~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn~ 1202 (1228)
+||++++... ..+.. ...+|.+++++++|. |||.++.
T Consensus 251 ~~d~~~g~~~----~~~~~---~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 251 VFGPDGGQPK----MRIRC---PFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp EECTTCBSCS----EEEEC---SSSCEEEEEECTTSSEEEEEETT
T ss_pred EEcCCCCcEe----EEEeC---CCCCceeEEECCCCCEEEEEeCC
Confidence 9999743322 22221 135789999999997 9998864
No 50
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.62 E-value=8.4e-07 Score=98.08 Aligned_cols=237 Identities=8% Similarity=-0.019 Sum_probs=140.1
Q ss_pred CCcccceEEe--CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 858 NNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 935 (1228)
Q Consensus 858 n~~p~gv~v~--~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLD 935 (1228)
..++.|.... ++++|++=-. --+|-.++... + .++.+.. . ..+..+..|++|+|||-.
T Consensus 12 ~~~~Egp~w~~~~~~l~~~d~~-----~~~i~~~d~~~-~---~~~~~~~-----~------~~~~~i~~~~dG~l~v~~ 71 (297)
T 3g4e_A 12 CRCGESPVWEEVSNSLLFVDIP-----AKKVCRWDSFT-K---QVQRVTM-----D------APVSSVALRQSGGYVATI 71 (297)
T ss_dssp CSBEEEEEEETTTTEEEEEETT-----TTEEEEEETTT-C---CEEEEEC-----S------SCEEEEEEBTTSSEEEEE
T ss_pred CccccCCeEECCCCEEEEEECC-----CCEEEEEECCC-C---cEEEEeC-----C------CceEEEEECCCCCEEEEE
Confidence 4467787775 5777766422 12566666421 1 1221110 0 136678899999999975
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCC-----------C
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR-----------Y 1004 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~-----------~ 1004 (1228)
. -.|..||++++++......+.. .+...++++++| .++.+|+++.+. .
T Consensus 72 ~--------------~~l~~~d~~~g~~~~~~~~~~~--~~~~~~~di~~d-----~dG~l~~~~~~~~~~~~~~~~~~~ 130 (297)
T 3g4e_A 72 G--------------TKFCALNWKEQSAVVLATVDND--KKNNRFNDGKVD-----PAGRYFAGTMAEETAPAVLERHQG 130 (297)
T ss_dssp T--------------TEEEEEETTTTEEEEEEECCTT--CSSEEEEEEEEC-----TTSCEEEEEEECCSBTTBCCTTCE
T ss_pred C--------------CeEEEEECCCCcEEEEEecCCC--CCCCCCCCEEEC-----CCCCEEEecCCcccccccccCCCc
Confidence 1 1699999999987654444322 234568889998 456699988542 2
Q ss_pred eEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceec
Q psy11781 1005 GLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIR 1084 (1228)
Q Consensus 1005 gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls 1084 (1228)
+|..+|.. ++..++. .+ +. ...| |++|
T Consensus 131 ~l~~~d~~-g~~~~~~---------------~~--~~---~png--------------------------------i~~s 157 (297)
T 3g4e_A 131 ALYSLFPD-HHVKKYF---------------DQ--VD---ISNG--------------------------------LDWS 157 (297)
T ss_dssp EEEEECTT-SCEEEEE---------------EE--ES---BEEE--------------------------------EEEC
T ss_pred EEEEEECC-CCEEEEe---------------ec--cc---cccc--------------------------------eEEc
Confidence 34444432 1111110 00 00 0112 5566
Q ss_pred CCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCC
Q psy11781 1085 DDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKT 1164 (1228)
Q Consensus 1085 ~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~ 1164 (1228)
||+++||+.-....++++.+... .+..+ . ....+..+... .+..+|+++|++|+||++....+.|.+||+++
T Consensus 158 pdg~~lyv~~~~~~~i~~~~~d~-~~G~~--~---~~~~~~~~~~~--~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t 229 (297)
T 3g4e_A 158 LDHKIFYYIDSLSYSVDAFDYDL-QTGQI--S---NRRSVYKLEKE--EQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT 229 (297)
T ss_dssp TTSCEEEEEEGGGTEEEEEEECT-TTCCE--E---EEEEEEECCGG--GCEEEEEEEBTTSCEEEEEETTTEEEEECTTT
T ss_pred CCCCEEEEecCCCCcEEEEeccC-CCCcc--c---CcEEEEECCCC--CCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 78999999887777788776320 11111 0 01112222221 13478999999999999999999999999974
Q ss_pred CccccCCeeEEEecCCceecCCceEEe-CCC-cEEEEeCCc
Q psy11781 1165 KVYLPQTQDIVQTSRDILNFPNDLKID-PND-NIWILSNKL 1203 (1228)
Q Consensus 1165 ~~~~~~n~~~v~~~~~~L~wPd~l~id-~dg-~Lyvlsn~l 1203 (1228)
+++. ..+.. . -..|..++++ +++ .|||++++-
T Consensus 230 G~~~----~~i~~-p--~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 GKRL----QTVKL-P--VDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CCEE----EEEEC-S--SSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ceEE----EEEEC-C--CCCceEEEEeCCCCCEEEEEcCCc
Confidence 4422 23322 1 2468889997 554 799999764
No 51
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.61 E-value=4.5e-06 Score=90.49 Aligned_cols=188 Identities=10% Similarity=0.038 Sum_probs=124.9
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 917 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 917 lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
...+.++.+|. .++||+.|.+.- +|.++|+.+..+... ++.. -.....|++|. .++.
T Consensus 35 ~~~~~gi~~d~~~~~ly~~d~~~~------------~I~~~~~~g~~~~~~--~~~~----~~~p~~ia~d~----~~~~ 92 (267)
T 1npe_A 35 AKVIIGLAFDCVDKVVYWTDISEP------------SIGRASLHGGEPTTI--IRQD----LGSPEGIALDH----LGRT 92 (267)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTT------------EEEEEESSSCCCEEE--ECTT----CCCEEEEEEET----TTTE
T ss_pred CCcEEEEEEecCCCEEEEEECCCC------------EEEEEecCCCCcEEE--EECC----CCCccEEEEEe----cCCe
Confidence 35678999997 679999998753 799999987764322 2221 13557788883 3689
Q ss_pred EEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcccccccccccc
Q psy11781 996 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 1075 (1228)
Q Consensus 996 aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~ 1075 (1228)
+|++|.....|.++|+.... .+..-. .+ + ....|
T Consensus 93 lyv~d~~~~~I~~~~~~g~~-~~~~~~-------------~~--~---~~P~~--------------------------- 126 (267)
T 1npe_A 93 IFWTDSQLDRIEVAKMDGTQ-RRVLFD-------------TG--L---VNPRG--------------------------- 126 (267)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEEC-------------SS--C---SSEEE---------------------------
T ss_pred EEEEECCCCEEEEEEcCCCC-EEEEEE-------------CC--C---CCccE---------------------------
Confidence 99999999999999986432 111100 00 0 01112
Q ss_pred CccccceecCCCceEEEEeCC--CCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcC-CCcEEEEec
Q psy11781 1076 GTNVDKTIRDDQRYMYFHSLS--SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNLV 1152 (1228)
Q Consensus 1076 ~~~~di~ls~d~r~LYf~pls--s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~-~G~LY~t~~ 1152 (1228)
|+++++++.||+.-.. +.+++++.. +... .+.+...+ -..+.|+++|. .+.||+++.
T Consensus 127 -----i~vd~~~g~lyv~~~~~~~~~I~~~~~----dg~~----------~~~~~~~~-~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 127 -----IVTDPVRGNLYWTDWNRDNPKIETSHM----DGTN----------RRILAQDN-LGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp -----EEEETTTTEEEEEECCSSSCEEEEEET----TSCC----------CEEEECTT-CSCEEEEEEETTTTEEEEEET
T ss_pred -----EEEeeCCCEEEEEECCCCCcEEEEEec----CCCC----------cEEEEECC-CCCCcEEEEcCCCCEEEEEEC
Confidence 5666778899999876 456776652 2211 11222211 13578999996 579999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeC
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
..+.|.+++.+ +. +...+.. .+.+|.++++| +++||+...
T Consensus 187 ~~~~I~~~~~~-g~----~~~~~~~---~~~~P~gi~~d-~~~lyva~~ 226 (267)
T 1npe_A 187 GTHRAECLNPA-QP----GRRKVLE---GLQYPFAVTSY-GKNLYYTDW 226 (267)
T ss_dssp TTTEEEEEETT-EE----EEEEEEE---CCCSEEEEEEE-TTEEEEEET
T ss_pred CCCEEEEEecC-CC----ceEEEec---CCCCceEEEEe-CCEEEEEEC
Confidence 99999999998 42 2233332 46799999998 689999763
No 52
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.60 E-value=0.00056 Score=86.08 Aligned_cols=234 Identities=12% Similarity=0.123 Sum_probs=115.7
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCc---ccCCCcceeeEEEeecCCCceE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQ---VFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~---~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
.|..+..|+.|+|||--.+. -|..||.++++..+ |..+..- ......+..|..| .++.
T Consensus 358 ~V~~i~~d~~g~lWiGt~~~-------------Gl~~~~~~~~~~~~-~~~~~~~~~~~l~~~~v~~i~~d-----~~g~ 418 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTNDG-------------GLNLYNPITQRFTS-YTLQEDESARGIGSNNIKAVYVD-----EKKS 418 (795)
T ss_dssp SEEEEEECTTSCEEEEESSS-------------CEEEECTTTCCEEE-ECCC------CCSCSCEEEEEEE-----TTTT
T ss_pred eeEEEEECCCCCEEEEECCC-------------CeEEEcCCCCcEEE-EecCCCCcccCCCCccEEEEEEc-----CCCC
Confidence 47888999999999942221 27888988887643 4332210 0112335566666 3555
Q ss_pred -EEEEcCCCCeEEEEECCCCeEEEeecCC-cCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcccccccccc
Q psy11781 996 -AYVNDVFRYGLIVYDFFKNTSYRLTHPY-MYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHH 1073 (1228)
Q Consensus 996 -aYItD~~~~gLIVydl~~g~swRv~h~s-~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~ 1073 (1228)
++|+-. ..||.+||.++++.+++.+.. -.+......+..+...-.|-..--|+..-.... ..+.++....
T Consensus 419 ~lWigt~-~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~-------~~~~~~~~~~ 490 (795)
T 4a2l_A 419 LVYIGTH-AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQ-------RSFTTIEKEK 490 (795)
T ss_dssp EEEEEET-TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTT-------TEEEECCBCT
T ss_pred EEEEEeC-cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCC-------CeEEEccccc
Confidence 888743 368999999999988876420 011000001111110001110001222211000 0111222110
Q ss_pred -ccCcc---cc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEecccc-CCCCcccEEEcCCCcE
Q psy11781 1074 -YNGTN---VD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF-RNTQASASAINSNGVM 1147 (1228)
Q Consensus 1074 -~~~~~---~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg-~~sqs~g~~~D~~G~L 1147 (1228)
..++. +. |..+++++ |++.... -+++++..--+- .+ .... ...+ ......++..|++|+|
T Consensus 491 ~~~~~~~~~i~~i~~d~~g~-lWigt~~--Gl~~~~~~~~~~-~~--~~~~--------~~~~l~~~~i~~i~~d~~g~l 556 (795)
T 4a2l_A 491 DGTPVVSKQITTLFRDSHKR-LWIGGEE--GLSVFKQEGLDI-QK--ASIL--------PVSNVTKLFTNCIYEASNGII 556 (795)
T ss_dssp TCCBCCCCCEEEEEECTTCC-EEEEESS--CEEEEEEETTEE-EE--CCCS--------CSCGGGGSCEEEEEECTTSCE
T ss_pred cccccCCceEEEEEECCCCC-EEEEeCC--ceEEEeCCCCeE-EE--ecCC--------CCCCCCCCeeEEEEECCCCCE
Confidence 00111 11 45566654 7777763 366665321100 11 0000 0001 1123456788999999
Q ss_pred EEEecCCCeEEEEeCCCCccccCCeeEEEecCCcee--cCCceEEeCCCcEEEEeC
Q psy11781 1148 FYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILN--FPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1148 Y~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~--wPd~l~id~dg~Lyvlsn 1201 (1228)
+++... +|.+||++++.+. .... .+.|. ...++..|.+|+||+.++
T Consensus 557 WigT~~--Gl~~~d~~~~~~~-----~~~~-~~gl~~~~i~~i~~d~~g~lWi~t~ 604 (795)
T 4a2l_A 557 WVGTRE--GFYCFNEKDKQIK-----RYNT-TNGLPNNVVYGILEDSFGRLWLSTN 604 (795)
T ss_dssp EEEESS--CEEEEETTTTEEE-----EECG-GGTCSCSCEEEEEECTTSCEEEEET
T ss_pred EEEeCC--CceeECCCCCcEE-----EeCC-CCCCchhheEEEEECCCCCEEEEcC
Confidence 999764 8999999743332 2211 11221 123567788999999985
No 53
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.59 E-value=2.8e-06 Score=99.21 Aligned_cols=194 Identities=13% Similarity=0.123 Sum_probs=127.8
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcE--EEEEECCCcccccCCCceeEEEEeecCCC
Q psy11781 466 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL--IRKYILPTAQVFEGSLFSNIVTEVVEDCD 542 (1228)
Q Consensus 466 ~lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~v--i~~y~~p~~v~~~~S~l~di~VD~~~~c~ 542 (1228)
.+.++.++.+|. .++||+.|.+. .+|..+++.+... .....+.. .......|+||. .
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~------------~~I~~~~~~g~~~~~~~~~~~~~----~~~~p~glavD~----~ 169 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISR----DIQAPDGLAVDW----I 169 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTT------------TEEEEEEC------CCCEEEECS----SCSCEEEEEEET----T
T ss_pred ccCcceEEeeeeccCceEEEecCC------------CeEEEEEcccCCCCCcceEEEeC----CCCCcccEEEEe----c
Confidence 467889999995 78999999974 2488899875321 00011111 123456899993 3
Q ss_pred CeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccc
Q psy11781 543 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 622 (1228)
Q Consensus 543 ~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~ 622 (1228)
++.+|++|.....|.|+|+.......+... + .....|||++|
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--------------~-----~~~P~~iavdp------------------- 211 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N-----GSKPRAIVVDP------------------- 211 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEEC--------------S-----SCCEEEEEEET-------------------
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeC--------------C-----CCCcceEEEec-------------------
Confidence 688999999999999999876432222110 0 01133566654
Q ss_pred cccCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEE
Q psy11781 623 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 700 (1228)
Q Consensus 623 ~~~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t 700 (1228)
.++.|||.-... .+++++.. +++ ..+.+...+ ...+.|+++| .+|.||++
T Consensus 212 -------------~~g~ly~td~~~~~~I~~~~~----dG~----------~~~~~~~~~-l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 212 -------------VHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp -------------TTTEEEEEECSSSCCEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred -------------ccCeEEEEeCCCCCEEEEEeC----CCC----------ccEEEEECC-CCceEEEEEEeCCCEEEEE
Confidence 567899988653 56777753 222 111222222 2468999999 78999999
Q ss_pred cCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 701 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 701 ~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
+...+.|.+++.+ + .+..++......+.+|.+|+++ ++.||++..
T Consensus 264 D~~~~~I~~~d~d-G----~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~ 308 (400)
T 3p5b_L 264 DSKLHSISSIDVN-G----GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 308 (400)
T ss_dssp ETTTTEEEEEETT-S----CCCEEEEECSSTTSSEEEEEEE-TTEEEEEES
T ss_pred ECCCCEEEEEeCC-C----CccEEEEeCCCCCCCCEEEEEe-CCEEEEecC
Confidence 9999999999998 4 2445665555678999999995 567988873
No 54
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.58 E-value=6.5e-06 Score=91.09 Aligned_cols=244 Identities=12% Similarity=0.080 Sum_probs=147.5
Q ss_pred cccceEEe-CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCC
Q psy11781 860 LPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGV 938 (1228)
Q Consensus 860 ~p~gv~v~-~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDtG~ 938 (1228)
.|.++++. +|++|++--. . -+|..++.+ ++ .++.+.. . .-..+.++..|++|+|||.+.+.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~--~---~~i~~~d~~--~~--~~~~~~~----~-----~~~~~~~i~~~~dg~l~v~~~~~ 107 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVF--E---GNIFKINPE--TK--EIKRPFV----S-----HKANPAAIKIHKDGRLFVCYLGD 107 (333)
T ss_dssp CEEEEEECTTSCEEEEETT--T---CEEEEECTT--TC--CEEEEEE----C-----SSSSEEEEEECTTSCEEEEECTT
T ss_pred cccCcEECCCCCEEEEECC--C---CEEEEEeCC--CC--cEEEEee----C-----CCCCcceEEECCCCcEEEEeCCC
Confidence 56788886 7889876321 1 256666532 11 2222210 0 01247788999999999998765
Q ss_pred CCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC------CCeEEEEECC
Q psy11781 939 TNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVYDFF 1012 (1228)
Q Consensus 939 ~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~------~~gLIVydl~ 1012 (1228)
.. ....|.+||++++++.+.+. .. ......+++++| .++.+|+++.. ..+|.++|.+
T Consensus 108 ~~--------~~~~i~~~d~~~~~~~~~~~--~~--~~~~~~~~i~~d-----~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 108 FK--------STGGIFAATENGDNLQDIIE--DL--STAYCIDDMVFD-----SKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp SS--------SCCEEEEECTTSCSCEEEEC--SS--SSCCCEEEEEEC-----TTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred CC--------CCceEEEEeCCCCEEEEEEc--cC--ccCCcccceEEC-----CCCCEEEEeccccccCCCceEEEEeCC
Confidence 21 12479999999988754332 11 134567888888 35679999875 3578888877
Q ss_pred CCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEE
Q psy11781 1013 KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF 1092 (1228)
Q Consensus 1013 ~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf 1092 (1228)
+++..++.. + + ....+ ++++++++.||+
T Consensus 171 ~~~~~~~~~---------------~--~---~~~~~--------------------------------i~~~~dg~~l~v 198 (333)
T 2dg1_A 171 FRTVTPIIQ---------------N--I---SVANG--------------------------------IALSTDEKVLWV 198 (333)
T ss_dssp SCCEEEEEE---------------E--E---SSEEE--------------------------------EEECTTSSEEEE
T ss_pred CCEEEEeec---------------C--C---Ccccc--------------------------------eEECCCCCEEEE
Confidence 665444310 0 0 01112 345568889999
Q ss_pred EeCCCCceEEEecchhcCCcccCCccccccc-eEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCC
Q psy11781 1093 HSLSSNRHYYVSTTDLRNSSRYVNSSDIDEY-FHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQT 1171 (1228)
Q Consensus 1093 ~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~-v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n 1171 (1228)
.......++.++.+. +... -...... +..+ .+ .....++++|++|+||++....+.|.+||++ +..
T Consensus 199 ~~~~~~~i~~~d~~~--~g~~---~~~~~~~~~~~~--~~-~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~---- 265 (333)
T 2dg1_A 199 TETTANRLHRIALED--DGVT---IQPFGATIPYYF--TG-HEGPDSCCIDSDDNLYVAMYGQGRVLVFNKR-GYP---- 265 (333)
T ss_dssp EEGGGTEEEEEEECT--TSSS---EEEEEEEEEEEC--CS-SSEEEEEEEBTTCCEEEEEETTTEEEEECTT-SCE----
T ss_pred EeCCCCeEEEEEecC--CCcC---cccccceEEEec--CC-CCCCCceEECCCCCEEEEEcCCCEEEEECCC-CCE----
Confidence 876666787776421 1110 0000000 1111 11 1246789999999999999888999999987 432
Q ss_pred eeEEEecC---CceecCCceEEeCCC-cEEEEeCCc
Q psy11781 1172 QDIVQTSR---DILNFPNDLKIDPND-NIWILSNKL 1203 (1228)
Q Consensus 1172 ~~~v~~~~---~~L~wPd~l~id~dg-~Lyvlsn~l 1203 (1228)
+..+.... ..+.+|.+++++++| .|||.+++-
T Consensus 266 ~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 266 IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEECG
T ss_pred EEEEEcCCCccccccCcceEEECCCCCEEEEEeCcc
Confidence 22332211 123479999998886 899998764
No 55
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.57 E-value=3.6e-06 Score=95.44 Aligned_cols=191 Identities=9% Similarity=0.053 Sum_probs=127.8
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 466 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 466 ~lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
++.++.++..|. .++||+.|.+. .+|..+++.+...... .+.. .-.....|+||. .++
T Consensus 33 ~~~~~~~ld~d~~~~~lyw~D~~~------------~~I~r~~~~g~~~~~~-~~~~----~l~~p~glavd~----~~g 91 (318)
T 3sov_A 33 GLEDAAAVDFVFSHGLIYWSDVSE------------EAIKRTEFNKTESVQN-VVVS----GLLSPDGLACDW----LGE 91 (318)
T ss_dssp EEEEEEEEEEEGGGTEEEEEETTT------------TEEEEEETTSSSCCCE-EEEE----CCSCCCEEEEET----TTT
T ss_pred CCCccEEEEEEeCCCEEEEEECCC------------CcEEEEEccCCCceEE-EEcC----CCCCccEEEEEc----CCC
Confidence 467788888986 68999999874 3589999987632111 1101 113456799993 478
Q ss_pred EEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccc
Q psy11781 545 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 624 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~ 624 (1228)
.+|++|.+...|.|+++.... .+++.. .+ .....|||+.|
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~-~~~l~~-------------~~-----~~~P~giavdp--------------------- 131 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSL-RKVLFW-------------QE-----LDQPRAIALDP--------------------- 131 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCS-CEEEEC-------------SS-----CSSEEEEEEEG---------------------
T ss_pred eEEEEECCCCEEEEEECCCCc-EEEEEe-------------CC-----CCCccEEEEeC---------------------
Confidence 999999999999999987532 222200 00 01234666655
Q ss_pred cCccccccccCCCceEEEeeCC-CCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEcC
Q psy11781 625 NGTNVDKTIRDDQRYMYFHSLS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 702 (1228)
Q Consensus 625 ~~~~~~i~is~d~r~LYf~~ls-s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~~ 702 (1228)
.++.|||.-.. ..+++++.. +++. .+.+...+ ...+.|+++| .+|.||+++.
T Consensus 132 -----------~~g~ly~td~~~~~~I~r~~~----dG~~----------~~~~~~~~-l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 132 -----------SSGFMYWTDWGEVPKIERAGM----DGSS----------RFIIINSE-IYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp -----------GGTEEEEEECSSSCEEEEEET----TSCS----------CEEEECSS-CSCEEEEEEETTTTEEEEEET
T ss_pred -----------CCCEEEEEecCCCCEEEEEEc----CCCC----------eEEEEECC-CCCccEEEEeccCCEEEEEEC
Confidence 45789998865 456888763 2221 11222222 2468999999 5899999999
Q ss_pred CCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 703 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 703 ~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
..+.|.+++.+ +. +..++.. ..+.+|.|++++ ++.||+..-
T Consensus 186 ~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~glav~-~~~lywtd~ 226 (318)
T 3sov_A 186 KLNFIHKSNLD-GT----NRQAVVK--GSLPHPFALTLF-EDILYWTDW 226 (318)
T ss_dssp TTTEEEEEETT-SC----SCEEEEC--SCCSCEEEEEEE-TTEEEEEET
T ss_pred CCCEEEEEcCC-CC----ceEEEec--CCCCCceEEEEe-CCEEEEEec
Confidence 99999999998 42 3345542 458999999998 457888763
No 56
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.53 E-value=0.00048 Score=86.47 Aligned_cols=190 Identities=12% Similarity=0.096 Sum_probs=109.7
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEE
Q psy11781 918 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 918 vSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
..|..+..|..|+|||--.+ --|..||.+++++. ++..+ ......+..|..| .++.++
T Consensus 407 ~~v~~i~~d~~g~lWigt~~-------------~Gl~~~~~~~~~~~-~~~~~---~~~~~~v~~i~~d-----~~g~lw 464 (781)
T 3v9f_A 407 NSVLCSLKDSEGNLWFGTYL-------------GNISYYNTRLKKFQ-IIELE---KNELLDVRVFYED-----KNKKIW 464 (781)
T ss_dssp SBEEEEEECTTSCEEEEETT-------------EEEEEECSSSCEEE-ECCST---TTCCCCEEEEEEC-----TTSEEE
T ss_pred cceEEEEECCCCCEEEEecc-------------CCEEEEcCCCCcEE-EeccC---CCCCCeEEEEEEC-----CCCCEE
Confidence 35888999999999994221 14889999998764 33322 1123345566666 467899
Q ss_pred EEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCc
Q psy11781 998 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 1077 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~ 1077 (1228)
|+-. .||.+||.++++..++.+.. ... . ...-+..|
T Consensus 465 igt~--~Gl~~~~~~~~~~~~~~~~~---~~~---~--------~~~~i~~i---------------------------- 500 (781)
T 3v9f_A 465 IGTH--AGVFVIDLASKKVIHHYDTS---NSQ---L--------LENFVRSI---------------------------- 500 (781)
T ss_dssp EEET--TEEEEEESSSSSCCEEECTT---TSS---C--------SCSCEEEE----------------------------
T ss_pred EEEC--CceEEEeCCCCeEEecccCc---ccc---c--------ccceeEEE----------------------------
Confidence 9865 69999999988765543211 000 0 00111122
Q ss_pred cccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEecc-cc-CCCCcccEEEcCCCcEEEEecCCC
Q psy11781 1078 NVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGS-RF-RNTQASASAINSNGVMFYNLVTKH 1155 (1228)
Q Consensus 1078 ~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~-rg-~~sqs~g~~~D~~G~LY~t~~~~~ 1155 (1228)
..++++ .|++....+. +++++.+- . .++.+.. .+ +.....++..|++|+|+++.- +
T Consensus 501 ----~~d~~g-~lWigt~~~G-l~~~~~~~---~-----------~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~--~ 558 (781)
T 3v9f_A 501 ----AQDSEG-RFWIGTFGGG-VGIYTPDM---Q-----------LVRKFNQYEGFCSNTINQIYRSSKGQMWLATG--E 558 (781)
T ss_dssp ----EECTTC-CEEEEESSSC-EEEECTTC---C-----------EEEEECTTTTCSCSCEEEEEECTTSCEEEEET--T
T ss_pred ----EEcCCC-CEEEEEcCCC-EEEEeCCC---C-----------eEEEccCCCCCCCCeeEEEEECCCCCEEEEEC--C
Confidence 222233 3666665333 77764210 0 1222211 11 112345678899999999975 6
Q ss_pred eE-EEEeCCCCccccCCeeEEEecCCcee--cCCceEEeCCCcEEEEeC
Q psy11781 1156 SV-GCWNTKTKVYLPQTQDIVQTSRDILN--FPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1156 aI-~~wn~~~~~~~~~n~~~v~~~~~~L~--wPd~l~id~dg~Lyvlsn 1201 (1228)
++ .++|++++.+. .... .+.|. ...++..|++|+||+.++
T Consensus 559 Glv~~~d~~~~~~~-----~~~~-~~gl~~~~i~~i~~d~~g~lW~~t~ 601 (781)
T 3v9f_A 559 GLVCFPSARNFDYQ-----VFQR-KEGLPNTHIRAISEDKNGNIWASTN 601 (781)
T ss_dssp EEEEESCTTTCCCE-----EECG-GGTCSCCCCCEEEECSSSCEEEECS
T ss_pred CceEEECCCCCcEE-----Eccc-cCCCCCceEEEEEECCCCCEEEEcC
Confidence 78 99999744332 2221 11221 235788899999999985
No 57
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.53 E-value=3.1e-06 Score=93.79 Aligned_cols=187 Identities=10% Similarity=0.043 Sum_probs=116.4
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
+.++.+|.+|+|||.+.|.. .|..||+. +++. .+.- ...-......+++++| .++.+|+|
T Consensus 88 ~~gl~~d~dG~l~v~~~~~~------------~v~~~~~~-g~~~-~~~~-~~~~~~~~~~~~i~~d-----~dG~l~~t 147 (305)
T 3dr2_A 88 TNGNAVDAQQRLVHCEHGRR------------AITRSDAD-GQAH-LLVG-RYAGKRLNSPNDLIVA-----RDGAIWFT 147 (305)
T ss_dssp EEEEEECTTSCEEEEETTTT------------EEEEECTT-SCEE-EEEC-EETTEECSCCCCEEEC-----TTSCEEEE
T ss_pred cceeeECCCCCEEEEECCCC------------EEEEECCC-CCEE-EEEe-ccCCCccCCCCCEEEC-----CCCCEEEe
Confidence 67889999999999998753 68889986 6643 2221 1111122456789998 46789999
Q ss_pred cCC-----------------CCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCC
Q psy11781 1000 DVF-----------------RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRH 1062 (1228)
Q Consensus 1000 D~~-----------------~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~ 1062 (1228)
|.. ..+|.+||.++|+..++. .+. ...|
T Consensus 148 d~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~------------------~~~---~p~g-------------- 192 (305)
T 3dr2_A 148 DPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA------------------DLD---HPNG-------------- 192 (305)
T ss_dssp CCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE------------------EES---SEEE--------------
T ss_pred CcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe------------------cCC---CCcc--------------
Confidence 862 246777777666544331 010 1123
Q ss_pred CccccccccccccCccccceecCCCceEEEEeCCC-----CceEEEecchhcCCcccCCccccccceEEeccccCCCCcc
Q psy11781 1063 PYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSS-----NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQAS 1137 (1228)
Q Consensus 1063 p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss-----~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~ 1137 (1228)
+++|||+++||+.--.. .++++.+..- ..+ . ..+.+.+.+ .+..+
T Consensus 193 ------------------l~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~---~~l-------~-~~~~~~~~~-~~~pd 242 (305)
T 3dr2_A 193 ------------------LAFSPDEQTLYVSQTPEQGHGSVEITAFAWRD---GAL-------H-DRRHFASVP-DGLPD 242 (305)
T ss_dssp ------------------EEECTTSSEEEEEECCC---CCCEEEEEEEET---TEE-------E-EEEEEECCS-SSCCC
T ss_pred ------------------eEEcCCCCEEEEEecCCcCCCCCEEEEEEecC---CCc-------c-CCeEEEECC-CCCCC
Confidence 34556899999986542 4576665321 101 0 011111111 23578
Q ss_pred cEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCC-cEEEEeCC
Q psy11781 1138 ASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPND-NIWILSNK 1202 (1228)
Q Consensus 1138 g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg-~Lyvlsn~ 1202 (1228)
|+++|++|+||++. .++|.+|+++ +.. +..+.. .+ .|..+.+++++ .|||.+++
T Consensus 243 gi~~d~~G~lwv~~--~~gv~~~~~~-g~~----~~~~~~-~~---~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 243 GFCVDRGGWLWSSS--GTGVCVFDSD-GQL----LGHIPT-PG---TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp SEEECTTSCEEECC--SSEEEEECTT-SCE----EEEEEC-SS---CCCEEEECTTSCEEEEEETT
T ss_pred eEEECCCCCEEEec--CCcEEEECCC-CCE----EEEEEC-CC---ceeEEEEeCCCCEEEEEcCC
Confidence 99999999999998 5689999998 542 233332 22 48888887666 69998864
No 58
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.51 E-value=3.4e-06 Score=106.97 Aligned_cols=197 Identities=12% Similarity=0.110 Sum_probs=129.4
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcE--EEEEECCCcccccCCCceeEEEEeecCCC
Q psy11781 466 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL--IRKYILPTAQVFEGSLFSNIVTEVVEDCD 542 (1228)
Q Consensus 466 ~lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~v--i~~y~~p~~v~~~~S~l~di~VD~~~~c~ 542 (1228)
.+.++.++.+|. .++||+.|.+. -+|..+++..... ..+..+.. .......|+||. .
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~------------~~I~~~~l~g~~~~~~~~~vi~~----~l~~P~GLAvD~----~ 481 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQ------------RMICSTQLDRAHGVSSYDTVISR----DIQAPDGLAVDW----I 481 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTT------------TEEEEEEC--------CEEEECS----SCSCCCEEEEET----T
T ss_pred CCCceEEEeecccCCeeEEeeccc------------eeEEEEeccCCCCCcceeEEEec----CCCCcceeeeee----c
Confidence 467788999997 78999999974 2488888875322 11112211 123456899994 3
Q ss_pred CeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccc
Q psy11781 543 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 622 (1228)
Q Consensus 543 ~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~ 622 (1228)
++.+|++|.+...|.|+++.... .+++-. .+ .....|||+.|
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~-~~~l~~-------------~~-----l~~P~gIaVDp------------------- 523 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVK-RKTLFR-------------EN-----GSKPRAIVVDP------------------- 523 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSS-EEEEEE-------------CT-----TCCEEEEEEET-------------------
T ss_pred CCcEEEEecCCCeEEEEeCCCCe-EEEEEe-------------CC-----CCCcceEEEec-------------------
Confidence 56899999999999999998543 333210 00 01134666655
Q ss_pred cccCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEE
Q psy11781 623 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 700 (1228)
Q Consensus 623 ~~~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t 700 (1228)
.+++|||.-... .+++++.. +++ ..+.+...+ ...+.|+++| .+|.||++
T Consensus 524 -------------~~g~LYwtD~g~~~~I~~~~~----dG~----------~~~~lv~~~-l~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 524 -------------VHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp -------------TTTEEEEEECSSSCEEEEEET----TSC----------CEEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred -------------CCCCEEEecCCCCCeEEEEec----CCC----------ceEEEEeCC-CCCceEEEEecCCCeEEEE
Confidence 567899998665 45666643 222 122222222 2468999999 89999999
Q ss_pred cCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecCcc
Q psy11781 701 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLH 754 (1228)
Q Consensus 701 ~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnrl~ 754 (1228)
+...+.|.+.+.+ +. ...++......|..|-+|+++ +++||++....+
T Consensus 576 D~~~~~I~~~d~d-G~----~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~ 623 (791)
T 3m0c_C 576 DSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINE 623 (791)
T ss_dssp ETTTTEEEEEETT-SC----SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTT
T ss_pred eCCCCcEEEEecC-CC----ceEEEecCCCccCCCCEEEEe-CCEEEEEECCCC
Confidence 9999999999998 53 335555455677888899886 458999885543
No 59
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.50 E-value=5.5e-06 Score=93.12 Aligned_cols=235 Identities=12% Similarity=0.029 Sum_probs=142.4
Q ss_pred CCcccceEEe--CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEe
Q psy11781 408 NNLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMD 485 (1228)
Q Consensus 408 n~~P~gv~v~--~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLD 485 (1228)
..++.|..+. ++++|++=-. --.|..++.+. +.++.++. + ..+..+..+++|+|||..
T Consensus 48 ~~~~egp~~~~~~~~l~~~d~~-----~~~i~~~d~~~----~~~~~~~~------~-----~~v~~i~~~~dg~l~v~~ 107 (326)
T 2ghs_A 48 MLLGEGPTFDPASGTAWWFNIL-----ERELHELHLAS----GRKTVHAL------P-----FMGSALAKISDSKQLIAS 107 (326)
T ss_dssp CSBEEEEEEETTTTEEEEEEGG-----GTEEEEEETTT----TEEEEEEC------S-----SCEEEEEEEETTEEEEEE
T ss_pred CCCCcCCeEeCCCCEEEEEECC-----CCEEEEEECCC----CcEEEEEC------C-----CcceEEEEeCCCeEEEEE
Confidence 3467788776 3777776322 12577776531 22222211 0 136677788999999986
Q ss_pred CCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC------CCeEEEE
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVY 559 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~------~~gLIVy 559 (1228)
.. .|..||++++++.+....+.. .....++++++| .++.+|+++.+ ..+|.++
T Consensus 108 ~~--------------gl~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d-----~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 108 DD--------------GLFLRDTATGVLTLHAELESD--LPGNRSNDGRMH-----PSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp TT--------------EEEEEETTTCCEEEEECSSTT--CTTEEEEEEEEC-----TTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CC--------------CEEEEECCCCcEEEEeeCCCC--CCCCCCCCEEEC-----CCCCEEEEeCCCcCCCCceEEEEE
Confidence 21 299999999987543333221 223467889998 45668998863 3577777
Q ss_pred EcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCce
Q psy11781 560 DFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRY 639 (1228)
Q Consensus 560 Dl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~ 639 (1228)
| +++..++.. + .....||+++| ++++
T Consensus 167 ~--~g~~~~~~~---------------~-----~~~~~~i~~s~--------------------------------dg~~ 192 (326)
T 2ghs_A 167 A--KGKVTKLFA---------------D-----ISIPNSICFSP--------------------------------DGTT 192 (326)
T ss_dssp E--TTEEEEEEE---------------E-----ESSEEEEEECT--------------------------------TSCE
T ss_pred e--CCcEEEeeC---------------C-----CcccCCeEEcC--------------------------------CCCE
Confidence 7 454433220 0 01133566654 7889
Q ss_pred EEEeeCCCCceEEEechhhcCC-CCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccC
Q psy11781 640 MYFHSLSSNRHYYVSTTDLRNS-SRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYL 718 (1228)
Q Consensus 640 LYf~~lss~~ly~V~T~~Lr~~-~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~ 718 (1228)
||+.......++.++.+. .++ .+ .. ...+..+... .+.++|+++|++|+||++....+.|.+|+++ +..
T Consensus 193 lyv~~~~~~~I~~~d~~~-~~Gl~~--~~---~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~- 262 (326)
T 2ghs_A 193 GYFVDTKVNRLMRVPLDA-RTGLPT--GK---AEVFIDSTGI--KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH- 262 (326)
T ss_dssp EEEEETTTCEEEEEEBCT-TTCCBS--SC---CEEEEECTTS--SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE-
T ss_pred EEEEECCCCEEEEEEccc-ccCCcc--cC---ceEEEECCCC--CCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE-
Confidence 999877666788887421 112 11 10 0112222211 1347899999999999999888999999997 432
Q ss_pred CCCeeEEEecCCceecCCceEEc-CCC-cEEEEecCc
Q psy11781 719 PQTQDIVQTSRDILNFPNDLKID-PND-NIWILSNKL 753 (1228)
Q Consensus 719 ~~n~~iV~~~d~~L~wPd~l~Id-~dg-~LyVlsnrl 753 (1228)
+..+.. . -..|.+++++ +++ .|||.+++-
T Consensus 263 ---~~~i~~-~--~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 263 ---IARYEV-P--GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp ---EEEEEC-S--CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred ---EEEEEC-C--CCCcEEEEEecCCCCEEEEEecCC
Confidence 233322 1 1357889997 664 699998764
No 60
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.50 E-value=6e-06 Score=96.39 Aligned_cols=195 Identities=12% Similarity=0.084 Sum_probs=127.1
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcE--EEEEECCCCcccCCCcceeeEEEeecCCC
Q psy11781 916 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL--IRKYILPTAQVFEGSLFSNIVTEVVEDCD 992 (1228)
Q Consensus 916 ~lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~l--ir~y~~p~~~~~~~S~l~di~VD~~~~c~ 992 (1228)
.+..+.++.+|. .++||+.|.+.- +|..+++..... .....+... -..-..|+||. .
T Consensus 110 ~~~~~~~l~~d~~~~~lywsD~~~~------------~I~~~~~~g~~~~~~~~~~~~~~----~~~p~glavD~----~ 169 (400)
T 3p5b_L 110 NLRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDW----I 169 (400)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTT------------EEEEEEC------CCCEEEECSS----CSCEEEEEEET----T
T ss_pred ccCcceEEeeeeccCceEEEecCCC------------eEEEEEcccCCCCCcceEEEeCC----CCCcccEEEEe----c
Confidence 466788999995 789999999753 688899876321 001111111 12346789984 2
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccc
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
++.+|++|.....|.|+|+.......+... + + ....|
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~--------------~--~---~~P~~------------------------ 206 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------N--G---SKPRA------------------------ 206 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEEC--------------S--S---CCEEE------------------------
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeC--------------C--C---CCcce------------------------
Confidence 678999999999999999875432221110 0 0 01112
Q ss_pred cccCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEE
Q psy11781 1073 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 1150 (1228)
Q Consensus 1073 ~~~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t 1150 (1228)
|+++|.++.|||+-... .+++++.. +.+ ..+.+...+ -..+.|+++| .+|.||++
T Consensus 207 --------iavdp~~g~ly~td~~~~~~I~~~~~----dG~----------~~~~~~~~~-l~~P~glavd~~~~~lY~a 263 (400)
T 3p5b_L 207 --------IVVDPVHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYWV 263 (400)
T ss_dssp --------EEEETTTTEEEEEECSSSCCEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEE
T ss_pred --------EEEecccCeEEEEeCCCCCEEEEEeC----CCC----------ccEEEEECC-CCceEEEEEEeCCCEEEEE
Confidence 55666778999987653 56777753 111 112222222 1357899999 78999999
Q ss_pred ecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1151 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1151 ~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
+...+.|.+.|.+ +. +..+++.....|.+|.+|+++ ++.||++...
T Consensus 264 D~~~~~I~~~d~d-G~----~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~ 309 (400)
T 3p5b_L 264 DSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 309 (400)
T ss_dssp ETTTTEEEEEETT-SC----CCEEEEECSSTTSSEEEEEEE-TTEEEEEESS
T ss_pred ECCCCEEEEEeCC-CC----ccEEEEeCCCCCCCCEEEEEe-CCEEEEecCC
Confidence 9999999999998 53 445666555678999999995 5588888743
No 61
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.49 E-value=5.6e-06 Score=99.55 Aligned_cols=222 Identities=14% Similarity=0.197 Sum_probs=136.0
Q ss_pred CCCcceEEEEEEEeC--CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEE-----
Q psy11781 913 NCNSLISVFRMSVDK--CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVT----- 985 (1228)
Q Consensus 913 ~c~~lvSV~~v~iD~--~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~V----- 985 (1228)
+|.+|..+.+|.+|+ .++|||.|.+.- .|.++|+++++|......+.. .-.....|++
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~~------------~i~~ID~~~~~v~~l~~~~~~---~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGHK------------AIQLIDLKNRMLSSPLNINTI---PTNRIRSIAFNKKIE 198 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETEE------------EEEEEETTTTEEEEEECCTTS---SCSBEEEEEECCCBT
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCCC------------eEEEEECCCCEEEEEEccCcc---ccCCCcEEEEeeccc
Confidence 477899999999995 589999997631 699999999998865443221 1124677877
Q ss_pred --EeecCCCceEEEEEcCCC------CeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccc
Q psy11781 986 --EVVEDCDHVFAYVNDVFR------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 1057 (1228)
Q Consensus 986 --D~~~~c~~~~aYItD~~~------~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~ 1057 (1228)
|. ++.++|++|... .++++++.+.+.. +..-+.. -.+. .+ .+..|+
T Consensus 199 ~~d~----~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~-------~~~~~~~--~~v~--~~---~~p~gi-------- 252 (496)
T 3kya_A 199 GYAD----EAEYMIVAIDYDGKGDESPSVYIIKRNADGT-------FDDRSDI--QLIA--AY---KQCNGA-------- 252 (496)
T ss_dssp TTBC----TTCEEEEEECCCTTGGGEEEEEEEECCTTSC-------CSTTSCE--EEEE--EE---SCCCCE--------
T ss_pred ccCC----CCCEEEEEeCCCCCcccCceEEEEecCCCCc-------eeecccc--eeec--cC---CCceEE--------
Confidence 63 356899999875 3577887544111 1100000 0011 11 123333
Q ss_pred cccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecch----hcCCcccCCcc-ccccceEEeccccC
Q psy11781 1058 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTD----LRNSSRYVNSS-DIDEYFHYLGSRFR 1132 (1228)
Q Consensus 1058 ~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~----Lr~~~~~~~~~-~~~~~v~~lG~rg~ 1132 (1228)
+++|+++.||+.-....++|+++.+. .....+|.... .....++.+...+.
T Consensus 253 ------------------------avdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~ 308 (496)
T 3kya_A 253 ------------------------TIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD 308 (496)
T ss_dssp ------------------------EECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS
T ss_pred ------------------------EEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC
Confidence 45557889999999999999998651 11333211000 00001222222222
Q ss_pred CCCcccEEEcCCCc-EEEEecCCCeEEEEeCC--CCccccCCeeEEEec------------CCceecCC-ceEEe-----
Q psy11781 1133 NTQASASAINSNGV-MFYNLVTKHSVGCWNTK--TKVYLPQTQDIVQTS------------RDILNFPN-DLKID----- 1191 (1228)
Q Consensus 1133 ~sqs~g~~~D~~G~-LY~t~~~~~aI~~wn~~--~~~~~~~n~~~v~~~------------~~~L~wPd-~l~id----- 1191 (1228)
.+...++++|.+|+ ||+++..++.|.+++.+ ++.+. +..+++-. ..+|..|. +++++
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~--~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFI--TPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEC--CCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceec--ccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence 22356899999998 89999999999997654 11111 11233321 24788999 88887
Q ss_pred --CCCcEEEEeC
Q psy11781 1192 --PNDNIWILSN 1201 (1228)
Q Consensus 1192 --~dg~Lyvlsn 1201 (1228)
.+|+|||...
T Consensus 387 ~~~~g~lyVaD~ 398 (496)
T 3kya_A 387 GEEEYDFYFVDR 398 (496)
T ss_dssp SSCCEEEEEEEG
T ss_pred ccCCCeEEEEEC
Confidence 6789999874
No 62
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.49 E-value=6.9e-06 Score=93.07 Aligned_cols=192 Identities=8% Similarity=0.023 Sum_probs=127.0
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCce
Q psy11781 916 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 994 (1228)
Q Consensus 916 ~lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~ 994 (1228)
++.++.++..|. .++||+.|.+.- +|..+++.+...... .+... -..-..|+||. .++
T Consensus 33 ~~~~~~~ld~d~~~~~lyw~D~~~~------------~I~r~~~~g~~~~~~-~~~~~----l~~p~glavd~----~~g 91 (318)
T 3sov_A 33 GLEDAAAVDFVFSHGLIYWSDVSEE------------AIKRTEFNKTESVQN-VVVSG----LLSPDGLACDW----LGE 91 (318)
T ss_dssp EEEEEEEEEEEGGGTEEEEEETTTT------------EEEEEETTSSSCCCE-EEEEC----CSCCCEEEEET----TTT
T ss_pred CCCccEEEEEEeCCCEEEEEECCCC------------cEEEEEccCCCceEE-EEcCC----CCCccEEEEEc----CCC
Confidence 467788888886 689999998753 789999987632111 11111 12345689984 368
Q ss_pred EEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccc
Q psy11781 995 FAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHY 1074 (1228)
Q Consensus 995 ~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~ 1074 (1228)
.+|++|.+...|.|+++... ..+++-. .+ + ....|
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~-~~~~l~~-------------~~--~---~~P~g-------------------------- 126 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGS-LRKVLFW-------------QE--L---DQPRA-------------------------- 126 (318)
T ss_dssp EEEEEETTTTEEEEEETTSC-SCEEEEC-------------SS--C---SSEEE--------------------------
T ss_pred eEEEEECCCCEEEEEECCCC-cEEEEEe-------------CC--C---CCccE--------------------------
Confidence 99999999999999998753 2222100 00 0 01123
Q ss_pred cCccccceecCCCceEEEEeCC-CCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEec
Q psy11781 1075 NGTNVDKTIRDDQRYMYFHSLS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLV 1152 (1228)
Q Consensus 1075 ~~~~~di~ls~d~r~LYf~pls-s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~ 1152 (1228)
|+++|.++.|||.-.. ..+++++.. +.+ ..+.+.+.+ -..+.|+++| .+|.||+++.
T Consensus 127 ------iavdp~~g~ly~td~~~~~~I~r~~~----dG~----------~~~~~~~~~-l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 127 ------IALDPSSGFMYWTDWGEVPKIERAGM----DGS----------SRFIIINSE-IYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp ------EEEEGGGTEEEEEECSSSCEEEEEET----TSC----------SCEEEECSS-CSCEEEEEEETTTTEEEEEET
T ss_pred ------EEEeCCCCEEEEEecCCCCEEEEEEc----CCC----------CeEEEEECC-CCCccEEEEeccCCEEEEEEC
Confidence 4555567889998764 567888763 111 112222222 1347899999 5899999999
Q ss_pred CCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1153 TKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1153 ~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
..+.|.+++.+ +. +.+++.. ..+.+|+|++++. +.||++.-.
T Consensus 186 ~~~~I~~~d~d-G~----~~~~~~~--~~~~~P~glav~~-~~lywtd~~ 227 (318)
T 3sov_A 186 KLNFIHKSNLD-GT----NRQAVVK--GSLPHPFALTLFE-DILYWTDWS 227 (318)
T ss_dssp TTTEEEEEETT-SC----SCEEEEC--SCCSCEEEEEEET-TEEEEEETT
T ss_pred CCCEEEEEcCC-CC----ceEEEec--CCCCCceEEEEeC-CEEEEEecC
Confidence 99999999998 53 4455553 4689999999984 578887643
No 63
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.46 E-value=6.3e-06 Score=99.09 Aligned_cols=222 Identities=14% Similarity=0.184 Sum_probs=136.2
Q ss_pred CCCcceEEEEEEEeC--CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEE-----
Q psy11781 463 NCNSLISVFRMSVDK--CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVT----- 535 (1228)
Q Consensus 463 ~c~~lvsV~~v~iD~--~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~V----- 535 (1228)
+|.+|..+.++.+|+ .++|||.|.+. -.|.++|++++++........ ..-....+|++
T Consensus 134 ~~~~~~~p~~la~dp~~~~~Lyv~~~~~------------~~i~~ID~~~~~v~~l~~~~~---~~~~~p~~ia~~~~~~ 198 (496)
T 3kya_A 134 KCCGFSDNGRLAFDPLNKDHLYICYDGH------------KAIQLIDLKNRMLSSPLNINT---IPTNRIRSIAFNKKIE 198 (496)
T ss_dssp SCBCCCSEEEEEEETTEEEEEEEEEETE------------EEEEEEETTTTEEEEEECCTT---SSCSBEEEEEECCCBT
T ss_pred cccccCCCCEEEEccCCCCEEEEEECCC------------CeEEEEECCCCEEEEEEccCc---cccCCCcEEEEeeccc
Confidence 377788999999996 58999999762 249999999998886544322 12234778888
Q ss_pred --EeecCCCCeEEEEecCCC------CeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCC
Q psy11781 536 --EVVEDCDHVFAYVNDVFR------YGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 607 (1228)
Q Consensus 536 --D~~~~c~~~~aYItDs~~------~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~ 607 (1228)
|. ++.++||+|... .++++++...+.. +..-+.. -.+. . ..+..|||+.|
T Consensus 199 ~~d~----~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~-------~~~~~~~--~~v~----~-~~~p~giavdp---- 256 (496)
T 3kya_A 199 GYAD----EAEYMIVAIDYDGKGDESPSVYIIKRNADGT-------FDDRSDI--QLIA----A-YKQCNGATIHP---- 256 (496)
T ss_dssp TTBC----TTCEEEEEECCCTTGGGEEEEEEEECCTTSC-------CSTTSCE--EEEE----E-ESCCCCEEECT----
T ss_pred ccCC----CCCEEEEEeCCCCCcccCceEEEEecCCCCc-------eeecccc--eeec----c-CCCceEEEEcC----
Confidence 62 455899999875 3577787544211 1100000 0111 1 12345566654
Q ss_pred cccCCCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechh----hcCCCCCCCc--cccccceEeecccc
Q psy11781 608 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTD----LRNSSRYVNS--SDIDEYFHYLGSRF 681 (1228)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~----Lr~~~~~~~~--~~~~~~v~~lG~~g 681 (1228)
+++.||+.-.....+|++..+. ...+.+ ++. ......++.+...+
T Consensus 257 ----------------------------~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~-~tp~~~~~~g~~~~l~~~~ 307 (496)
T 3kya_A 257 ----------------------------INGELYFNSYEKGQVFRLDLVDYFKTIKNGGS-WDPIVKNNPNTFKQLFTIA 307 (496)
T ss_dssp ----------------------------TTCCEEEEETTTTEEEEECHHHHHHHHHTTCC-CCCBGGGCTTTEEEEEECS
T ss_pred ----------------------------CCCeEEEEECCCCEEEEEecccccccccCcee-ecccccccccccceeEecC
Confidence 5678999999998999998651 112221 000 00000122222222
Q ss_pred ccccccceEEccCCc-EEEEcCCCCeEEEEeCCCCccCC-CCeeEEEec------------CCceecCC-ceEEc-----
Q psy11781 682 RNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLP-QTQDIVQTS------------RDILNFPN-DLKID----- 741 (1228)
Q Consensus 682 ~~~qs~G~a~D~~G~-LY~t~~~~~aI~~wn~~~~~~~~-~n~~iV~~~------------d~~L~wPd-~l~Id----- 741 (1228)
..+.+-++++|.+|+ ||+++..++.|.+++.+ +.-.. .+..+++-. ..+|..|. +++++
T Consensus 308 ~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d-g~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~ 386 (496)
T 3kya_A 308 DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD-EIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYT 386 (496)
T ss_dssp SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE-TTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCC
T ss_pred CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC-CCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccc
Confidence 223467899999998 89999999999997764 21100 011233322 23688999 88887
Q ss_pred --CCCcEEEEec
Q psy11781 742 --PNDNIWILSN 751 (1228)
Q Consensus 742 --~dg~LyVlsn 751 (1228)
.+|.|||...
T Consensus 387 ~~~~g~lyVaD~ 398 (496)
T 3kya_A 387 GEEEYDFYFVDR 398 (496)
T ss_dssp SSCCEEEEEEEG
T ss_pred ccCCCeEEEEEC
Confidence 6789999874
No 64
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.45 E-value=1e-05 Score=89.50 Aligned_cols=211 Identities=15% Similarity=0.144 Sum_probs=134.0
Q ss_pred eEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEE
Q psy11781 468 ISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 546 (1228)
Q Consensus 468 vsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~a 546 (1228)
..+-++..|+ .++||++.-. +++|+.+|+. +++++++.+... .-+-.|+++ .++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~-g~v~~~i~l~g~-----~D~EGIa~~-----~~g~~ 83 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------------PAAIVEMTTN-GDLIRTIPLDFV-----KDLETIEYI-----GDNQF 83 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------------TEEEEEEETT-CCEEEEEECSSC-----SSEEEEEEC-----STTEE
T ss_pred cCcceeEEeCCCCEEEEEECC------------CCeEEEEeCC-CCEEEEEecCCC-----CChHHeEEe-----CCCEE
Confidence 4588889996 5789987654 2569999998 999999998431 235677886 45677
Q ss_pred EEecCCCCeEEEEEcCCCeE-EEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccccc
Q psy11781 547 YVNDVFRYGLIVYDFFKNTS-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 625 (1228)
Q Consensus 547 YItDs~~~gLIVyDl~~g~s-wRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~ 625 (1228)
+|++.+...|++|++..... |.+....+. + + ...-.-|.-|||.+|
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~---------~-~-~~~~N~g~EGLA~d~---------------------- 130 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIP---------L-Q-ESPTNCGFEGLAYSR---------------------- 130 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECC---------C-S-SCCCSSCCEEEEEET----------------------
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeeccc---------c-c-cccccCCcceEEEeC----------------------
Confidence 89999999999999877553 332211000 0 0 000122445666654
Q ss_pred CccccccccCCCceEEEeeCCCC-ceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEEEcCC
Q psy11781 626 GTNVDKTIRDDQRYMYFHSLSSN-RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVT 703 (1228)
Q Consensus 626 ~~~~~i~is~d~r~LYf~~lss~-~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~t~~~ 703 (1228)
++++||...=.+. .+|.+. ..+....+ + +...-...+.. ......|+++| .+|.||+-.-+
T Consensus 131 ----------~~~~L~va~E~~p~~i~~~~-g~~~~~~l--~---i~~~~~~~~~~-~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 131 ----------QDHTFWFFKEKNPIEVYKVN-GLLSSNEL--H---ISKDKALQRQF-TLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp ----------TTTEEEEEEESSSEEEEEEE-STTCSSCC--E---EEECHHHHHTC-CSSCCCEEEEETTTTEEEEEETT
T ss_pred ----------CCCEEEEEECcCCceEEEEc-ccccCCce--e---eecchhhcccc-ccCCceeEEEcCCCCeEEEEECC
Confidence 5667888777766 688887 22222221 0 00000000111 11247999999 89999999999
Q ss_pred CCeEEEEeCCCCccCCCCeeEEEecC------CceecCCceEEcCCCcEEEEe--cCcccc
Q psy11781 704 KHSVGCWNTKTKVYLPQTQDIVQTSR------DILNFPNDLKIDPNDNIWILS--NKLHQY 756 (1228)
Q Consensus 704 ~~aI~~wn~~~~~~~~~n~~iV~~~d------~~L~wPd~l~Id~dg~LyVls--nrl~~~ 756 (1228)
...|..+|.+ +.. ...+.-.. +.+.=|-||++|++|+|||++ |.|-+|
T Consensus 194 s~~L~~~d~~-g~~----~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f 249 (255)
T 3qqz_A 194 SRALQEVTLV-GEV----IGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRF 249 (255)
T ss_dssp TTEEEEECTT-CCE----EEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEE
T ss_pred CCeEEEEcCC-CCE----EEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEE
Confidence 9999999998 542 12222222 134568999999999999998 444433
No 65
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.43 E-value=1.3e-06 Score=109.34 Aligned_cols=192 Identities=12% Similarity=0.114 Sum_probs=124.1
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCC----cEEEEEECCCcccccCCCceeEEEEeecCC
Q psy11781 467 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSLFSNIVTEVVEDC 541 (1228)
Q Consensus 467 lvsV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td----~vi~~y~~p~~v~~~~S~l~di~VD~~~~c 541 (1228)
+..+.++.+|. .++||+.|.+.- +|..+|+.+. ... ..+.. .......|+||.
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~------------~I~~~~~~g~~~~~~~~--~~i~~----~~~~P~glavD~---- 462 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYD--TVISR----DIQAPDGLAVDW---- 462 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTT------------SBEEEESCCCCC-CCCC--CBCCS----CC--CCCEECCC----
T ss_pred CcceEEEccccccCeEEEEecCCC------------eEEEEecCCCCCCcceE--EEEeC----CCCCcceEEEEe----
Confidence 45567888886 679999998742 3888898751 111 01111 112345788884
Q ss_pred CCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccc
Q psy11781 542 DHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNV 621 (1228)
Q Consensus 542 ~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~ 621 (1228)
.++.+|++|.....|.|+|+.......+... + + ....|||++|
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~--------------~--~---~~P~giavDp------------------ 505 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------Q--G---SKPRAIVVDP------------------ 505 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCC--------------S--S---CCCCCEECCS------------------
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeC--------------C--C---CCcceEEEcc------------------
Confidence 3578999999999999999886543332211 0 0 1123556654
Q ss_pred ccccCccccccccCCCceEEEeeCCC-CceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEc-cCCcEEE
Q psy11781 622 HHYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFY 699 (1228)
Q Consensus 622 ~~~~~~~~~i~is~d~r~LYf~~lss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D-~~G~LY~ 699 (1228)
.+++|||.-... .+++++.. +++ ..+.+...+ ...+.|+++| .+|.||+
T Consensus 506 --------------~~g~ly~td~~~~~~I~~~~~----dG~----------~~~~l~~~~-l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 506 --------------VHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp --------------SSSCCEECCCSSSCCEEBCCS----SSC----------CCCEESCSS-CSSCCCEEECTTTCCEEE
T ss_pred --------------CCCcEEEcccCCCCeEEEEeC----CCC----------CeeEEEeCC-CCCccEEEEeccCCEEEE
Confidence 567899987654 45665542 222 111122211 2468999999 6799999
Q ss_pred EcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecC
Q psy11781 700 NLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 752 (1228)
Q Consensus 700 t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnr 752 (1228)
++...+.|.+++.+ + .+..++......+.+|.+|+++.+ .||++...
T Consensus 557 aD~~~~~I~~~d~d-G----~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~ 603 (699)
T 1n7d_A 557 VDSKLHSISSIDVN-G----GNRKTILEDEKRLAHPFSLAVFED-KVFWTDII 603 (699)
T ss_dssp EETTTTEEEEECSS-S----SCCEEECCCSSSCSSCCCCEEETT-EEEEECST
T ss_pred EecCCCeEEEEccC-C----CceEEEEecCCcCCCceEeEEECC-EEEEEeCC
Confidence 99999999999997 4 234555544567899999999865 78888743
No 66
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=9.9e-06 Score=102.73 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=128.8
Q ss_pred cceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcE--EEEEECCCCcccCCCcceeeEEEeecCCC
Q psy11781 916 SLISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTL--IRKYILPTAQVFEGSLFSNIVTEVVEDCD 992 (1228)
Q Consensus 916 ~lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~l--ir~y~~p~~~~~~~S~l~di~VD~~~~c~ 992 (1228)
.+..+.++.+|. .++|++.|.+.- +|..+++..... ..+..+... ...-..|+||..
T Consensus 422 ~~~~~~gl~~d~~~~~lY~sD~~~~------------~I~~~~l~g~~~~~~~~~vi~~~----l~~P~GLAvD~~---- 481 (791)
T 3m0c_C 422 NLRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYDTVISRD----IQAPDGLAVDWI---- 481 (791)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTT------------EEEEEEC--------CEEEECSS----CSCCCEEEEETT----
T ss_pred CCCceEEEeecccCCeeEEeeccce------------eEEEEeccCCCCCcceeEEEecC----CCCcceeeeeec----
Confidence 356678999997 789999999763 788899876422 111122222 133456999953
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccc
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
++.+|+||.+...|.|+++... ..+++- -.+ + ....|
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~-~~~~l~-------------~~~--l---~~P~g------------------------ 518 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGV-KRKTLF-------------REN--G---SKPRA------------------------ 518 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSS-SEEEEE-------------ECT--T---CCEEE------------------------
T ss_pred CCcEEEEecCCCeEEEEeCCCC-eEEEEE-------------eCC--C---CCcce------------------------
Confidence 5689999999999999999754 333321 000 0 01123
Q ss_pred cccCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEE
Q psy11781 1073 HYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYN 1150 (1228)
Q Consensus 1073 ~~~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t 1150 (1228)
|+|+|.+++|||+-... .+++++.. +.+ ..+.+...+. ..+.|+++| .+|.||++
T Consensus 519 --------IaVDp~~g~LYwtD~g~~~~I~~~~~----dG~----------~~~~lv~~~l-~~P~GLavD~~~~~LYwa 575 (791)
T 3m0c_C 519 --------IVVDPVHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTENI-QWPNGITLDLLSGRLYWV 575 (791)
T ss_dssp --------EEEETTTTEEEEEECSSSCEEEEEET----TSC----------CEEEEECSSC-SCEEEEEEETTTTEEEEE
T ss_pred --------EEEecCCCCEEEecCCCCCeEEEEec----CCC----------ceEEEEeCCC-CCceEEEEecCCCeEEEE
Confidence 45566778999988654 55666542 111 1222333221 357899999 88999999
Q ss_pred ecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCchh
Q psy11781 1151 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKLHQ 1205 (1228)
Q Consensus 1151 ~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l~~ 1205 (1228)
+...+.|.+.+.+ +. +..+++.....|..|-+|+++ +++||++....+.
T Consensus 576 D~~~~~I~~~d~d-G~----~~~~v~~~~~~l~~P~glav~-~~~lYwtD~~~~~ 624 (791)
T 3m0c_C 576 DSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEA 624 (791)
T ss_dssp ETTTTEEEEEETT-SC----SCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTE
T ss_pred eCCCCcEEEEecC-CC----ceEEEecCCCccCCCCEEEEe-CCEEEEEECCCCE
Confidence 9999999999998 54 345565555678888898885 4589999865554
No 67
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.42 E-value=1.6e-05 Score=89.36 Aligned_cols=234 Identities=12% Similarity=0.011 Sum_probs=139.9
Q ss_pred CcccceEEe--CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCcEEEEeC
Q psy11781 859 NLPLGIGIW--RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDT 936 (1228)
Q Consensus 859 ~~p~gv~v~--~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~grLWVLDt 936 (1228)
.++.|+... ++++|++=-. --+|..++.. ++ .++.++. . ..+..+..+.+|++||...
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~-----~~~i~~~d~~--~~--~~~~~~~-----~------~~v~~i~~~~dg~l~v~~~ 108 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNIL-----ERELHELHLA--SG--RKTVHAL-----P------FMGSALAKISDSKQLIASD 108 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGG-----GTEEEEEETT--TT--EEEEEEC-----S------SCEEEEEEEETTEEEEEET
T ss_pred CCCcCCeEeCCCCEEEEEECC-----CCEEEEEECC--CC--cEEEEEC-----C------CcceEEEEeCCCeEEEEEC
Confidence 456777775 4777776322 1267667642 11 2222210 0 1366677889999999862
Q ss_pred CCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC------CCeEEEEE
Q psy11781 937 GVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF------RYGLIVYD 1010 (1228)
Q Consensus 937 G~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~------~~gLIVyd 1010 (1228)
. .|..||++++++.+....+.. .....++++++| .++.+|+++.+ ..+|.++|
T Consensus 109 ---~-----------gl~~~d~~~g~~~~~~~~~~~--~~~~~~~~i~~d-----~~G~l~v~~~~~~~~~~~~~l~~~~ 167 (326)
T 2ghs_A 109 ---D-----------GLFLRDTATGVLTLHAELESD--LPGNRSNDGRMH-----PSGALWIGTMGRKAETGAGSIYHVA 167 (326)
T ss_dssp ---T-----------EEEEEETTTCCEEEEECSSTT--CTTEEEEEEEEC-----TTSCEEEEEEETTCCTTCEEEEEEE
T ss_pred ---C-----------CEEEEECCCCcEEEEeeCCCC--CCCCCCCCEEEC-----CCCCEEEEeCCCcCCCCceEEEEEe
Confidence 1 499999999987543333221 223567888888 34568898763 35677777
Q ss_pred CCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceE
Q psy11781 1011 FFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYM 1090 (1228)
Q Consensus 1011 l~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~L 1090 (1228)
+++..++.. + + ....| |++|+|+++|
T Consensus 168 --~g~~~~~~~---------------~--~---~~~~~--------------------------------i~~s~dg~~l 193 (326)
T 2ghs_A 168 --KGKVTKLFA---------------D--I---SIPNS--------------------------------ICFSPDGTTG 193 (326)
T ss_dssp --TTEEEEEEE---------------E--E---SSEEE--------------------------------EEECTTSCEE
T ss_pred --CCcEEEeeC---------------C--C---cccCC--------------------------------eEEcCCCCEE
Confidence 454433210 0 0 01112 4456689999
Q ss_pred EEEeCCCCceEEEecchhcCC-cccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCcccc
Q psy11781 1091 YFHSLSSNRHYYVSTTDLRNS-SRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLP 1169 (1228)
Q Consensus 1091 Yf~plss~~ly~V~T~~Lr~~-~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~ 1169 (1228)
|+.--....+++++... .+. .+ .. ...+..+... .+..+|+++|++|+||++....+.|.+||++ +..
T Consensus 194 yv~~~~~~~I~~~d~~~-~~Gl~~--~~---~~~~~~~~~~--~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~-g~~-- 262 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLDA-RTGLPT--GK---AEVFIDSTGI--KGGMDGSVCDAEGHIWNARWGEGAVDRYDTD-GNH-- 262 (326)
T ss_dssp EEEETTTCEEEEEEBCT-TTCCBS--SC---CEEEEECTTS--SSEEEEEEECTTSCEEEEEETTTEEEEECTT-CCE--
T ss_pred EEEECCCCEEEEEEccc-ccCCcc--cC---ceEEEECCCC--CCCCCeeEECCCCCEEEEEeCCCEEEEECCC-CCE--
Confidence 99877667788887430 011 11 00 0112222211 1346899999999999999888999999997 532
Q ss_pred CCeeEEEecCCceecCCceEEe-CCC-cEEEEeCCc
Q psy11781 1170 QTQDIVQTSRDILNFPNDLKID-PND-NIWILSNKL 1203 (1228)
Q Consensus 1170 ~n~~~v~~~~~~L~wPd~l~id-~dg-~Lyvlsn~l 1203 (1228)
...+.. . ...|.+++++ +++ .|||.+++-
T Consensus 263 --~~~i~~-~--~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 263 --IARYEV-P--GKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp --EEEEEC-S--CSBEEEEEEESTTSCEEEEEEBCT
T ss_pred --EEEEEC-C--CCCcEEEEEecCCCCEEEEEecCC
Confidence 222321 1 2357889987 664 799998765
No 68
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.38 E-value=3.3e-05 Score=85.91 Aligned_cols=195 Identities=10% Similarity=0.071 Sum_probs=128.7
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
.+++.++++|+||+-.... ..-+|.++|++|+++++++.++.. .+-..+.++ +..+|++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~----------~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~------g~~lyv~ 81 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLY----------GRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLL------NEKLYQV 81 (266)
T ss_dssp EEEEEECSTTEEEEEECST----------TTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEE------TTEEEEE
T ss_pred cccEEEeCCCeEEEECCCC----------CCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEe------CCEEEEE
Confidence 5788898889999975421 123899999999999999998653 223346665 4689999
Q ss_pred cCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccc
Q psy11781 1000 DVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 1079 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~ 1079 (1228)
+-....+.|||.++.+.-+- |.+. . .-|+.
T Consensus 82 t~~~~~v~viD~~t~~v~~~-------------i~~g-~-------~~g~g----------------------------- 111 (266)
T 2iwa_A 82 VWLKNIGFIYDRRTLSNIKN-------------FTHQ-M-------KDGWG----------------------------- 111 (266)
T ss_dssp ETTCSEEEEEETTTTEEEEE-------------EECC-S-------SSCCE-----------------------------
T ss_pred EecCCEEEEEECCCCcEEEE-------------EECC-C-------CCeEE-----------------------------
Confidence 99999999999998765442 1111 0 01222
Q ss_pred cceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccC-CCCcccEEEcCCCcEEEEecCCCeEE
Q psy11781 1080 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSVG 1158 (1228)
Q Consensus 1080 di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~-~sqs~g~~~D~~G~LY~t~~~~~aI~ 1158 (1228)
|++|+++||.+- .|.+++.|+++-++- ...++ +|.+|. -....++.+. +|.||.+....+.|.
T Consensus 112 ---lt~Dg~~l~vs~-gs~~l~viD~~t~~v----------~~~I~-Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~ 175 (266)
T 2iwa_A 112 ---LATDGKILYGSD-GTSILYEIDPHTFKL----------IKKHN-VKYNGHRVIRLNELEYI-NGEVWANIWQTDCIA 175 (266)
T ss_dssp ---EEECSSSEEEEC-SSSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred ---EEECCCEEEEEC-CCCeEEEEECCCCcE----------EEEEE-ECCCCcccccceeEEEE-CCEEEEecCCCCeEE
Confidence 334788899877 567899998744332 12222 444321 1224466666 689999998999999
Q ss_pred EEeCCCCccccCCeeEEEec----------CCceecCCceEEeCCC-cEEEEeCCchh
Q psy11781 1159 CWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPND-NIWILSNKLHQ 1205 (1228)
Q Consensus 1159 ~wn~~~~~~~~~n~~~v~~~----------~~~L~wPd~l~id~dg-~Lyvlsn~l~~ 1205 (1228)
..|++|++-. +.|... .....-|.|++++++| .|||+.-+.++
T Consensus 176 vID~~tg~V~----~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 176 RISAKDGTLL----GWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp EEETTTCCEE----EEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEECCCCcEE----EEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe
Confidence 9999854322 223211 1122467899999887 57777666654
No 69
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=98.37 E-value=8.3e-05 Score=81.91 Aligned_cols=281 Identities=10% Similarity=0.057 Sum_probs=159.0
Q ss_pred cccceEEe--CCeEEEEeccCCC-CCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCc-EEEEe
Q psy11781 860 LPLGIGIW--RSTIFLSFPKWKA-GIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMD 935 (1228)
Q Consensus 860 ~p~gv~v~--~gRiFvt~PR~~~-gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~gr-LWVLD 935 (1228)
-|.++++. .+++|++-..-.. +..-+|..++..... .+.-++. . ..+.++.++.+|+ |||.+
T Consensus 42 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~---~~~~~~~-----~------~~~~~~~~s~dg~~l~v~~ 107 (353)
T 3vgz_A 42 GAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLE---VTQAIHN-----D------LKPFGATINNTTQTLWFGN 107 (353)
T ss_dssp SEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCC---EEEEEEE-----S------SCCCSEEEETTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCe---EEEEEec-----C------CCcceEEECCCCCEEEEEe
Confidence 36677876 4689988755221 113466666542111 2222221 0 1245678888876 99998
Q ss_pred CCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccC---CCcceeeEEEeecCCCceEEEEEcCC-CCeEEEEEC
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE---GSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDF 1011 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~---~S~l~di~VD~~~~c~~~~aYItD~~-~~gLIVydl 1011 (1228)
.+.. +|.+||++++++++++.++...... ......++++. ++.++|+++.+ ...|.+||+
T Consensus 108 ~~~~------------~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~----dg~~l~~~~~~~~~~i~~~d~ 171 (353)
T 3vgz_A 108 TVNS------------AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADD----ATNTVYISGIGKESVIWVVDG 171 (353)
T ss_dssp TTTT------------EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEET----TTTEEEEEEESSSCEEEEEET
T ss_pred cCCC------------EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECC----CCCEEEEEecCCCceEEEEcC
Confidence 7642 7999999999999999986532211 11245677763 46789999954 567999999
Q ss_pred CCCeEEEeec-CCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcccc-ceecCCCce
Q psy11781 1012 FKNTSYRLTH-PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRY 1089 (1228)
Q Consensus 1012 ~~g~swRv~h-~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d-i~ls~d~r~ 1089 (1228)
++++..+... .... |....+.-+|..+-..+.--.+.+-..... .....+.... ........ ++++|++++
T Consensus 172 ~~~~~~~~~~~~~~~--~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~----~~~~~~~~~~-~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 172 GNIKLKTAIQNTGKM--STGLALDSEGKRLYTTNADGELITIDTADN----KILSRKKLLD-DGKEHFFINISLDTARQR 244 (353)
T ss_dssp TTTEEEEEECCCCTT--CCCCEEETTTTEEEEECTTSEEEEEETTTT----EEEEEEECCC-SSSCCCEEEEEEETTTTE
T ss_pred CCCceEEEecCCCCc--cceEEECCCCCEEEEEcCCCeEEEEECCCC----eEEEEEEcCC-CCCCcccceEEECCCCCE
Confidence 9998876543 2111 222223334433322111000111000000 0000000000 00011122 789999999
Q ss_pred EEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCc-EEEEecCCCeEEEEeCCCCccc
Q psy11781 1090 MYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYL 1168 (1228)
Q Consensus 1090 LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~-LY~t~~~~~aI~~wn~~~~~~~ 1168 (1228)
||.....+..++.++.+ ... ....+. ++ +..+++++.+|. ||++.-..+.|..||..+++.
T Consensus 245 l~~~~~~~~~v~~~d~~---~~~-------~~~~~~-~~------~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~- 306 (353)
T 3vgz_A 245 AFITDSKAAEVLVVDTR---NGN-------ILAKVA-AP------ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV- 306 (353)
T ss_dssp EEEEESSSSEEEEEETT---TCC-------EEEEEE-CS------SCCCEEEETTTTEEEEEETTTTEEEEEETTTTEE-
T ss_pred EEEEeCCCCEEEEEECC---CCc-------EEEEEE-cC------CCceEEECCCCCEEEEEECCCCeEEEEECCCCeE-
Confidence 99998877778888742 111 111122 11 235788998886 999998899999999973321
Q ss_pred cCCeeEEEecCCceecCCceEEeCCCc-EEEEeCC
Q psy11781 1169 PQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNK 1202 (1228)
Q Consensus 1169 ~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn~ 1202 (1228)
...+. .-..|.+++++++|. ||+...+
T Consensus 307 ---~~~~~----~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 307 ---VKTFD----TPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp ---EEEEE----CCSEEEEEEECTTSCEEEEEEEC
T ss_pred ---EEEEe----cCCCCCeEEEcCCCCEEEEEEcc
Confidence 12221 123789999999996 7776644
No 70
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.36 E-value=8.6e-06 Score=94.14 Aligned_cols=261 Identities=11% Similarity=0.090 Sum_probs=138.0
Q ss_pred cccceEEe-CCeEEEEcccCCCCCC-------cEEEEEECCCCCCCCcccCCCCcCcCCC-CCCCcceEEEEEEEeC---
Q psy11781 410 LPLGIGIW-RSTIFLSFPKWKAGIP-------FTLASFNMNDPSESPILLPYPNWSYFDD-SNCNSLISVFRMSVDK--- 477 (1228)
Q Consensus 410 ~P~gv~v~-~gRiFvt~PR~~~gvP-------~TL~~v~~~~~~~sp~l~PYP~~~wn~~-~~c~~lvsV~~v~iD~--- 477 (1228)
=|.+|++. +|++|++.--|.+|.+ =.+..++.++.+ +..+....-. . .+ ..--.+.++.+..
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~--~~~~~l~~~g---~~~~-~~~f~PhGi~~~~d~d 124 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE--PAVSELEIIG---NTLD-ISSFNPHGISTFIDDD 124 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS--CCEEECEEEC---SSCC-GGGCCEEEEEEEECTT
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC--CceEEEEccC---CCCC-cCceeeeeeEEEECCC
Confidence 47788876 6999999766665543 235555543211 2222111000 0 01 1123677777743
Q ss_pred -CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCC--
Q psy11781 478 -CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY-- 554 (1228)
Q Consensus 478 -~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~-- 554 (1228)
..||||+|.+..+ ..-.|+.+|..++.+...-.+.. ++-...||+++| .++..|+++..-.
T Consensus 125 g~~~L~Vvnh~~~~--------s~ielf~~d~~~~~~~~~~~~~g---~~~~~pND~~v~-----~~G~fyvt~~~~ftd 188 (355)
T 3sre_A 125 NTVYLLVVNHPGSS--------STVEVFKFQEEEKSLLHLKTIRH---KLLPSVNDIVAV-----GPEHFYATNDHYFID 188 (355)
T ss_dssp CCEEEEEEECSTTC--------CEEEEEEEETTTTEEEEEEEECC---TTCSSEEEEEEE-----ETTEEEEEESCSCSS
T ss_pred CcEEEEEEECCCCC--------CeEEEEEEECCCCEEEEEecccc---CCCCCCceEEEe-----CCCCEEecCCcEeCC
Confidence 3479999998422 12237777776665443334422 244678999999 5677888875210
Q ss_pred ---eEE--EEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccc
Q psy11781 555 ---GLI--VYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 629 (1228)
Q Consensus 555 ---gLI--VyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1228)
++. ......|+.+|+.. .......+| + ...+|||+||
T Consensus 189 ~~~~~~e~~~~~~~g~vyr~d~-------~~~~~~~~~--l---~~pNGia~sp-------------------------- 230 (355)
T 3sre_A 189 PYLKSWEMHLGLAWSFVTYYSP-------NDVRVVAEG--F---DFANGINISP-------------------------- 230 (355)
T ss_dssp HHHHHHHHHTTCCCEEEEEECT-------TCCEEEEEE--E---SSEEEEEECT--------------------------
T ss_pred cccccchhhccCCccEEEEEEC-------CeEEEeecC--C---cccCcceECC--------------------------
Confidence 000 00123344555431 111111111 1 2245777766
Q ss_pred cccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEcc-CCcEEEEc-CCCCeE
Q psy11781 630 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNL-VTKHSV 707 (1228)
Q Consensus 630 ~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~-~G~LY~t~-~~~~aI 707 (1228)
|+++||+.-....++++.+.. .++.+ .. ...+ .+ + +.++|+++|+ +|+||++. .....|
T Consensus 231 ------Dg~~lYvadt~~~~I~~~~~~--~~g~l--~~---~~~~-~~---~--g~PDGi~vD~e~G~lwva~~~~g~~v 291 (355)
T 3sre_A 231 ------DGKYVYIAELLAHKIHVYEKH--ANWTL--TP---LRVL-SF---D--TLVDNISVDPVTGDLWVGCHPNGMRI 291 (355)
T ss_dssp ------TSSEEEEEEGGGTEEEEEEEC--TTSCE--EE---EEEE-EC---S--SEEEEEEECTTTCCEEEEEESCHHHH
T ss_pred ------CCCEEEEEeCCCCeEEEEEEC--CCCcE--ec---CEEE-eC---C--CCCceEEEeCCCCcEEEEecCCceEE
Confidence 789999999888888887642 12332 11 1122 12 2 4689999998 69999965 354455
Q ss_pred EEEeCCCCcc------------CCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 708 GCWNTKTKVY------------LPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 708 ~~wn~~~~~~------------~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
.||+|+ .+- .......+..++.+.....+.++-.+|.||+-+
T Consensus 292 ~~~~P~-~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGs 345 (355)
T 3sre_A 292 FFYDAE-NPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGT 345 (355)
T ss_dssp HSCCTT-SCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEE
T ss_pred EEECCC-CCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEE
Confidence 555554 110 001123334455554445555555678888866
No 71
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.34 E-value=1.8e-05 Score=87.46 Aligned_cols=205 Identities=13% Similarity=0.111 Sum_probs=130.0
Q ss_pred eEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEE
Q psy11781 918 ISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 996 (1228)
Q Consensus 918 vSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~a 996 (1228)
..+-++..|+ .++||++... +++|+.+|+. +++++++++... .-+..|+++ .++..
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~------------~~~I~~ld~~-g~v~~~i~l~g~-----~D~EGIa~~-----~~g~~ 83 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINK------------PAAIVEMTTN-GDLIRTIPLDFV-----KDLETIEYI-----GDNQF 83 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEET------------TEEEEEEETT-CCEEEEEECSSC-----SSEEEEEEC-----STTEE
T ss_pred cCcceeEEeCCCCEEEEEECC------------CCeEEEEeCC-CCEEEEEecCCC-----CChHHeEEe-----CCCEE
Confidence 3577888986 5789997655 2379999998 999999998432 235567776 45667
Q ss_pred EEEcCCCCeEEEEECCCCeE-EEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcccccccccccc
Q psy11781 997 YVNDVFRYGLIVYDFFKNTS-YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 1075 (1228)
Q Consensus 997 YItD~~~~gLIVydl~~g~s-wRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~ 1075 (1228)
+|+|.+...|++|++..... |.+....+.- + ...-.-|.-|
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~----------~-~~~~N~g~EG--------------------------- 125 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIPL----------Q-ESPTNCGFEG--------------------------- 125 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECCC----------S-SCCCSSCCEE---------------------------
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeecccc----------c-cccccCCcce---------------------------
Confidence 89999999999999876543 3221110000 0 0000112233
Q ss_pred CccccceecCCCceEEEEeCCCC-ceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEEEecC
Q psy11781 1076 GTNVDKTIRDDQRYMYFHSLSSN-RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFYNLVT 1153 (1228)
Q Consensus 1076 ~~~~di~ls~d~r~LYf~plss~-~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~t~~~ 1153 (1228)
|+.+|.+.+||-..=.+. .+|.++ ..+....+ + +...-...+.. ......|+++| .+|.||+-.-+
T Consensus 126 -----LA~d~~~~~L~va~E~~p~~i~~~~-g~~~~~~l--~---i~~~~~~~~~~-~~~d~S~l~~dp~tg~lliLS~~ 193 (255)
T 3qqz_A 126 -----LAYSRQDHTFWFFKEKNPIEVYKVN-GLLSSNEL--H---ISKDKALQRQF-TLDDVSGAEFNQQKNTLLVLSHE 193 (255)
T ss_dssp -----EEEETTTTEEEEEEESSSEEEEEEE-STTCSSCC--E---EEECHHHHHTC-CSSCCCEEEEETTTTEEEEEETT
T ss_pred -----EEEeCCCCEEEEEECcCCceEEEEc-ccccCCce--e---eecchhhcccc-ccCCceeEEEcCCCCeEEEEECC
Confidence 455567788998887777 788887 22222111 0 00000000111 11346899999 88999999999
Q ss_pred CCeEEEEeCCCCccccCCeeEEEecC------CceecCCceEEeCCCcEEEEe
Q psy11781 1154 KHSVGCWNTKTKVYLPQTQDIVQTSR------DILNFPNDLKIDPNDNIWILS 1200 (1228)
Q Consensus 1154 ~~aI~~wn~~~~~~~~~n~~~v~~~~------~~L~wPd~l~id~dg~Lyvls 1200 (1228)
...|...|.+ +... ..+.-.. .++.=|-||++|++|+|||++
T Consensus 194 s~~L~~~d~~-g~~~----~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 194 SRALQEVTLV-GEVI----GEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp TTEEEEECTT-CCEE----EEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred CCeEEEEcCC-CCEE----EEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 9999999998 5422 1122111 235678999999999999997
No 72
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.32 E-value=2.7e-06 Score=106.50 Aligned_cols=193 Identities=11% Similarity=0.088 Sum_probs=122.7
Q ss_pred ceEEEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCC----cEEEEEECCCCcccCCCcceeeEEEeecCC
Q psy11781 917 LISVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSLFSNIVTEVVEDC 991 (1228)
Q Consensus 917 lvSV~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td----~lir~y~~p~~~~~~~S~l~di~VD~~~~c 991 (1228)
+..+.+|.+|. .++||+.|.+.- +|..+|+.+. ... ..+... ...-..|+||..
T Consensus 405 ~~~p~gla~d~~~~~Ly~sD~~~~------------~I~~~~~~g~~~~~~~~--~~i~~~----~~~P~glavD~~--- 463 (699)
T 1n7d_A 405 LRNVVALDTEVASNRIYWSDLSQR------------MICSTQLDRAHGVSSYD--TVISRD----IQAPDGLAVDWI--- 463 (699)
T ss_dssp CTTCCCCEEETTTTEEEECCTTTT------------SBEEEESCCCCC-CCCC--CBCCSC----C--CCCEECCCS---
T ss_pred CcceEEEccccccCeEEEEecCCC------------eEEEEecCCCCCCcceE--EEEeCC----CCCcceEEEEee---
Confidence 34466778886 679999998753 5888888762 111 011111 122345888742
Q ss_pred CceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcccccccc
Q psy11781 992 DHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNV 1071 (1228)
Q Consensus 992 ~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~ 1071 (1228)
++.+|++|.....|.|+|+.......+... + + ....|
T Consensus 464 -~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~--------------~--~---~~P~g----------------------- 500 (699)
T 1n7d_A 464 -HSNIYWTDSVLGTVSVADTKGVKRKTLFRE--------------Q--G---SKPRA----------------------- 500 (699)
T ss_dssp -SSBCEECCTTTSCEEEEBSSSCCEEEECCC--------------S--S---CCCCC-----------------------
T ss_pred -CCcEEEEeccCCeEEEEecCCCceEEEEeC--------------C--C---CCcce-----------------------
Confidence 578999999999999999876433222110 0 0 01112
Q ss_pred ccccCccccceecCCCceEEEEeCCC-CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc-CCCcEEE
Q psy11781 1072 HHYNGTNVDKTIRDDQRYMYFHSLSS-NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN-SNGVMFY 1149 (1228)
Q Consensus 1072 ~~~~~~~~di~ls~d~r~LYf~plss-~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D-~~G~LY~ 1149 (1228)
|+++|.+++|||.-... .+++++.. +.+ ..+.+...+ -..+.|+++| .+|.||+
T Consensus 501 ---------iavDp~~g~ly~td~~~~~~I~~~~~----dG~----------~~~~l~~~~-l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 501 ---------IVVDPVHGFMYWTDWGTPAKIKKGGL----NGV----------DIYSLVTEN-IQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp ---------EECCSSSSCCEECCCSSSCCEEBCCS----SSC----------CCCEESCSS-CSSCCCEEECTTTCCEEE
T ss_pred ---------EEEccCCCcEEEcccCCCCeEEEEeC----CCC----------CeeEEEeCC-CCCccEEEEeccCCEEEE
Confidence 45556778899987654 55665542 111 111122211 1357899999 6789999
Q ss_pred EecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCCc
Q psy11781 1150 NLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNKL 1203 (1228)
Q Consensus 1150 t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l 1203 (1228)
++...+.|.+++.+ +. +..+++.....+.+|.+|+++.+ .||++...-
T Consensus 557 aD~~~~~I~~~d~d-G~----~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 557 VDSKLHSISSIDVN-GG----NRKTILEDEKRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp EETTTTEEEEECSS-SS----CCEEECCCSSSCSSCCCCEEETT-EEEEECSTT
T ss_pred EecCCCeEEEEccC-CC----ceEEEEecCCcCCCceEeEEECC-EEEEEeCCC
Confidence 99999999999998 42 44556554567899999999875 788887443
No 73
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.29 E-value=4.2e-05 Score=85.01 Aligned_cols=196 Identities=9% Similarity=0.052 Sum_probs=127.7
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.++++.++++++||+..... ..-+|.++|++|+++++++.++.. .+-..++++ +..+|+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~----------~~s~v~~iD~~tg~v~~~i~l~~~-----~fgeGi~~~------g~~lyv 80 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLY----------GRSSVRQVALQTGKVENIHKMDDS-----YFGEGLTLL------NEKLYQ 80 (266)
T ss_dssp CEEEEEECSTTEEEEEECST----------TTCEEEEEETTTCCEEEEEECCTT-----CCEEEEEEE------TTEEEE
T ss_pred CcccEEEeCCCeEEEECCCC----------CCCEEEEEECCCCCEEEEEecCCC-----cceEEEEEe------CCEEEE
Confidence 35788899889999975421 234599999999999999998653 233457776 468999
Q ss_pred ecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
++-....+.|||.++.+.-+- +.++ . --|++|++
T Consensus 81 ~t~~~~~v~viD~~t~~v~~~-------------i~~g-----~---~~g~glt~------------------------- 114 (266)
T 2iwa_A 81 VVWLKNIGFIYDRRTLSNIKN-------------FTHQ-----M---KDGWGLAT------------------------- 114 (266)
T ss_dssp EETTCSEEEEEETTTTEEEEE-------------EECC-----S---SSCCEEEE-------------------------
T ss_pred EEecCCEEEEEECCCCcEEEE-------------EECC-----C---CCeEEEEE-------------------------
Confidence 999899999999998755431 1111 0 11334443
Q ss_pred ccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccc-cccccceEEccCCcEEEEcCCCCeE
Q psy11781 629 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSV 707 (1228)
Q Consensus 629 ~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~-~~qs~G~a~D~~G~LY~t~~~~~aI 707 (1228)
|+++||.+- .+.+++.++++-++- ...++ +|.+|. .....++++. +|.||.+....+.|
T Consensus 115 -------Dg~~l~vs~-gs~~l~viD~~t~~v----------~~~I~-Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 115 -------DGKILYGSD-GTSILYEIDPHTFKL----------IKKHN-VKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp -------CSSSEEEEC-SSSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred -------CCCEEEEEC-CCCeEEEEECCCCcE----------EEEEE-ECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 678899877 566898888644321 12222 343321 1234567776 78999999999999
Q ss_pred EEEeCCCCccCCCCeeEEEec----------CCceecCCceEEcCCCc-EEEEecCccc
Q psy11781 708 GCWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPNDN-IWILSNKLHQ 755 (1228)
Q Consensus 708 ~~wn~~~~~~~~~n~~iV~~~----------d~~L~wPd~l~Id~dg~-LyVlsnrl~~ 755 (1228)
.+.|+.++. -.+.|... .....-|.|+++++++. |||+-.+.++
T Consensus 175 ~vID~~tg~----V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~ 229 (266)
T 2iwa_A 175 ARISAKDGT----LLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK 229 (266)
T ss_dssp EEEETTTCC----EEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEEECCCCc----EEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe
Confidence 999998432 12333211 11224578999998874 6665544443
No 74
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=98.22 E-value=4.3e-05 Score=88.30 Aligned_cols=259 Identities=10% Similarity=0.085 Sum_probs=136.2
Q ss_pred cccceEEe-CCeEEEEeccCCCCCC-------cEEEEEECCCCCCCCccccCC--CCCcCCCCCCCcceEEEEEEEeC--
Q psy11781 860 LPLGIGIW-RSTIFLSFPKWKAGIP-------FTLASFNMNDPSESPILLPYP--NWSYFDDSNCNSLISVFRMSVDK-- 927 (1228)
Q Consensus 860 ~p~gv~v~-~gRiFvt~PR~~~gvP-------~TLa~v~~~~~~~sP~l~PYP--~~~wn~~~~c~~lvSV~~v~iD~-- 927 (1228)
-|.+|++. +|++|++.--|.+|.+ -.+..++.++.+ +..+... +-++ + ..--.+.+|.+..
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~--~~~~~l~~~g~~~----~-~~~f~PhGi~~~~d~ 123 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKE--PAVSELEIIGNTL----D-ISSFNPHGISTFIDD 123 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSS--CCEEECEEECSSC----C-GGGCCEEEEEEEECT
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCC--CceEEEEccCCCC----C-cCceeeeeeEEEECC
Confidence 47788875 8999999866665543 345556543211 1222111 1001 1 1123677777743
Q ss_pred CC--cEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCC-
Q psy11781 928 CD--RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY- 1004 (1228)
Q Consensus 928 ~g--rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~- 1004 (1228)
.| +|||+|.+..+ ..-.|+.+|..++.+...-.+.. ++-...||+++| .++-.|+++..-.
T Consensus 124 dg~~~L~Vvnh~~~~--------s~ielf~~d~~~~~~~~~~~~~g---~~~~~pND~~v~-----~~G~fyvt~~~~ft 187 (355)
T 3sre_A 124 DNTVYLLVVNHPGSS--------STVEVFKFQEEEKSLLHLKTIRH---KLLPSVNDIVAV-----GPEHFYATNDHYFI 187 (355)
T ss_dssp TCCEEEEEEECSTTC--------CEEEEEEEETTTTEEEEEEEECC---TTCSSEEEEEEE-----ETTEEEEEESCSCS
T ss_pred CCcEEEEEEECCCCC--------CeEEEEEEECCCCEEEEEecccc---CCCCCCceEEEe-----CCCCEEecCCcEeC
Confidence 34 79999998522 11257777777665544334432 234578999999 3577888876310
Q ss_pred ----eEE--EEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 1005 ----GLI--VYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 1005 ----gLI--Vydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
++. ......|+.+|+. |.......+| +. .
T Consensus 188 d~~~~~~e~~~~~~~g~vyr~d-------~~~~~~~~~~--l~------------------------------------~ 222 (355)
T 3sre_A 188 DPYLKSWEMHLGLAWSFVTYYS-------PNDVRVVAEG--FD------------------------------------F 222 (355)
T ss_dssp SHHHHHHHHHTTCCCEEEEEEC-------TTCCEEEEEE--ES------------------------------------S
T ss_pred CcccccchhhccCCccEEEEEE-------CCeEEEeecC--Cc------------------------------------c
Confidence 000 0001223334431 1111111111 11 1
Q ss_pred cc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcC-CCcEEEEe-cCCC
Q psy11781 1079 VD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS-NGVMFYNL-VTKH 1155 (1228)
Q Consensus 1079 ~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~-~G~LY~t~-~~~~ 1155 (1228)
.| |++|||+++||+.--...++++.+.. .+.++ .. ...+ .+ + +.++|+++|+ +|+||++. ..-.
T Consensus 223 pNGia~spDg~~lYvadt~~~~I~~~~~~--~~g~l--~~---~~~~-~~---~--g~PDGi~vD~e~G~lwva~~~~g~ 289 (355)
T 3sre_A 223 ANGINISPDGKYVYIAELLAHKIHVYEKH--ANWTL--TP---LRVL-SF---D--TLVDNISVDPVTGDLWVGCHPNGM 289 (355)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEEC--TTSCE--EE---EEEE-EC---S--SEEEEEEECTTTCCEEEEEESCHH
T ss_pred cCcceECCCCCEEEEEeCCCCeEEEEEEC--CCCcE--ec---CEEE-eC---C--CCCceEEEeCCCCcEEEEecCCce
Confidence 12 66777999999999888888887743 12222 11 1112 12 2 3589999998 69999965 3434
Q ss_pred eEEEEeCCCCcc------------ccCCeeEEEecCCceecCCceEEeCCCcEEEEe
Q psy11781 1156 SVGCWNTKTKVY------------LPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 1200 (1228)
Q Consensus 1156 aI~~wn~~~~~~------------~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvls 1200 (1228)
.|.+++|+ .+- ..-....+..++.+...-.+.++-.+|.||+-+
T Consensus 290 ~v~~~~P~-~~~~s~v~rI~~~~~~~~~v~~v~~ddG~~l~~~T~a~~~~g~L~iGs 345 (355)
T 3sre_A 290 RIFFYDAE-NPPGSEVLRIQDILSEEPKVTVVYAENGTVLQGSTVAAVYKGKLLIGT 345 (355)
T ss_dssp HHHSCCTT-SCCCEEEEEEECTTSSSCEEEEEEEECSSSCCSEEEEEEETTEEEEEE
T ss_pred EEEEECCC-CCCCCEEEEEEccCCCCcEEEEEEEcCCCEEEeeEEEEEECCEEEEEE
Confidence 45555544 110 011234455555655455555655678899865
No 75
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.17 E-value=0.00011 Score=81.46 Aligned_cols=196 Identities=9% Similarity=0.054 Sum_probs=124.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
..+++..+ +++||+--. .- +.-+|.++|++|+++++++.+|+. -|=..|.++ +..+|+
T Consensus 44 ftqGL~~~-~~~LyestG-~~---------g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~------g~~ly~ 101 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTG-LN---------GRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDW------KDKIVG 101 (262)
T ss_dssp EEEEEEEE-TTEEEEEEE-ET---------TEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEE------TTEEEE
T ss_pred ccceEEEE-CCEEEEECC-CC---------CCceEEEEECCCCcEEEEEecCCc-----cceeEEEEe------CCEEEE
Confidence 45777887 689998532 11 223799999999999999999753 222346666 468999
Q ss_pred EcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
++-...-+.|||.++.+.-+- |.+.+ -|.+|.
T Consensus 102 ltw~~~~v~v~D~~t~~~~~t-------------i~~~~---------eG~glt-------------------------- 133 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVRS-------------FNYDG---------EGWGLT-------------------------- 133 (262)
T ss_dssp EESSSSEEEEEETTTCCEEEE-------------EECSS---------CCCCEE--------------------------
T ss_pred EEeeCCEEEEEECccCcEEEE-------------EECCC---------CceEEe--------------------------
Confidence 998889999999998766552 22221 122332
Q ss_pred ccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccC-CCCcccEEEcCCCcEEEEecCCCeE
Q psy11781 1079 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSV 1157 (1228)
Q Consensus 1079 ~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~-~sqs~g~~~D~~G~LY~t~~~~~aI 1157 (1228)
+|++.||-+-- +.+++.++++-++- ...++ ++..|. -.....+... +|.||.+....+.|
T Consensus 134 ------~dg~~L~~SdG-s~~i~~iDp~T~~v----------~~~I~-V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 134 ------HNDQYLIMSDG-TPVLRFLDPESLTP----------VRTIT-VTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp ------ECSSCEEECCS-SSEEEEECTTTCSE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred ------cCCCEEEEECC-CCeEEEEcCCCCeE----------EEEEE-eccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 36778888774 56688887654332 12222 222111 0112234554 78999999999999
Q ss_pred EEEeCCCCccccCCeeEEEec---------CCceecCCceEEeCCC-cEEEEeCCchhhh
Q psy11781 1158 GCWNTKTKVYLPQTQDIVQTS---------RDILNFPNDLKIDPND-NIWILSNKLHQYL 1207 (1228)
Q Consensus 1158 ~~wn~~~~~~~~~n~~~v~~~---------~~~L~wPd~l~id~dg-~Lyvlsn~l~~~~ 1207 (1228)
.+.|++|++-. +.|-.. .....=|+|+++|+++ .|||+.-++++.+
T Consensus 195 ~vIDp~tG~V~----~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~~ 250 (262)
T 3nol_A 195 VRIDPETGKVT----GIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKVF 250 (262)
T ss_dssp EEECTTTCBEE----EEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEEECCCCcEE----EEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCceE
Confidence 99999865432 222211 1122357999999865 6788777777643
No 76
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.10 E-value=0.00018 Score=79.73 Aligned_cols=195 Identities=9% Similarity=0.042 Sum_probs=124.1
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
..+++..+ +++||+-..- .+.-+|.++|++|+++++++.+++. -|-..|+++ +..+|+
T Consensus 44 ftqGL~~~-~~~LyestG~----------~g~S~v~~vD~~Tgkv~~~~~l~~~-----~FgeGit~~------g~~ly~ 101 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGL----------NGRSSIRKVDIESGKTLQQIELGKR-----YFGEGISDW------KDKIVG 101 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEE----------TTEEEEEEECTTTCCEEEEEECCTT-----CCEEEEEEE------TTEEEE
T ss_pred ccceEEEE-CCEEEEECCC----------CCCceEEEEECCCCcEEEEEecCCc-----cceeEEEEe------CCEEEE
Confidence 46788888 6899985321 1234599999999999999998653 223457776 468999
Q ss_pred ecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
++-....+.|||.++.+.-+ .|.+.+ .|.+|++
T Consensus 102 ltw~~~~v~v~D~~t~~~~~-------------ti~~~~---------eG~glt~------------------------- 134 (262)
T 3nol_A 102 LTWKNGLGFVWNIRNLRQVR-------------SFNYDG---------EGWGLTH------------------------- 134 (262)
T ss_dssp EESSSSEEEEEETTTCCEEE-------------EEECSS---------CCCCEEE-------------------------
T ss_pred EEeeCCEEEEEECccCcEEE-------------EEECCC---------CceEEec-------------------------
Confidence 98888899999999876544 222211 2444443
Q ss_pred ccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccc-cccccceEEccCCcEEEEcCCCCeE
Q psy11781 629 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSV 707 (1228)
Q Consensus 629 ~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~-~~qs~G~a~D~~G~LY~t~~~~~aI 707 (1228)
+++.||-+.- +.+++.++++-++- ...++ ++..|. ......+... +|.||.+....+.|
T Consensus 135 -------dg~~L~~SdG-s~~i~~iDp~T~~v----------~~~I~-V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I 194 (262)
T 3nol_A 135 -------NDQYLIMSDG-TPVLRFLDPESLTP----------VRTIT-VTAHGEELPELNELEWV-DGEIFANVWQTNKI 194 (262)
T ss_dssp -------CSSCEEECCS-SSEEEEECTTTCSE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred -------CCCEEEEECC-CCeEEEEcCCCCeE----------EEEEE-eccCCccccccceeEEE-CCEEEEEEccCCeE
Confidence 5677888874 55688776643321 12222 222221 1122235554 78999999999999
Q ss_pred EEEeCCCCccCCCCeeEEEec---------CCceecCCceEEcCCC-cEEEEecCcccc
Q psy11781 708 GCWNTKTKVYLPQTQDIVQTS---------RDILNFPNDLKIDPND-NIWILSNKLHQY 756 (1228)
Q Consensus 708 ~~wn~~~~~~~~~n~~iV~~~---------d~~L~wPd~l~Id~dg-~LyVlsnrl~~~ 756 (1228)
.+.|++++. -.+.|... .+...=|+||++++++ .|||+--+.++.
T Consensus 195 ~vIDp~tG~----V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~Wp~~ 249 (262)
T 3nol_A 195 VRIDPETGK----VTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLWPKV 249 (262)
T ss_dssp EEECTTTCB----EEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTCSEE
T ss_pred EEEECCCCc----EEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCCCce
Confidence 999998443 22333211 1122357899999876 577776666653
No 77
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.10 E-value=0.00033 Score=76.83 Aligned_cols=196 Identities=12% Similarity=0.104 Sum_probs=125.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.++++..|. ++||+-- |.- +.-+|.++|++|+++++++.+|... +=..++++ +..+|+
T Consensus 22 ftqGL~~~~-~~Lyest-G~~---------g~S~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~------~~~ly~ 79 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYEST-GET---------GRSSVRKVDLETGRILQRAEVPPPY-----FGAGIVAW------RDRLIQ 79 (243)
T ss_dssp CEEEEEEET-TEEEEEE-CCT---------TSCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEE------TTEEEE
T ss_pred ccccEEEEC-CEEEEEC-CCC---------CCceEEEEECCCCCEEEEEeCCCCc-----ceeEEEEe------CCEEEE
Confidence 367888886 8999842 221 2348999999999999999998752 22346665 478999
Q ss_pred EcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
.+-...-+.|||.++.+--+- |...+ -|.+|.
T Consensus 80 ltw~~~~v~v~D~~tl~~~~t-------------i~~~~---------~Gwglt-------------------------- 111 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRAR-------------FRYPG---------EGWALT-------------------------- 111 (243)
T ss_dssp EESSSSEEEEEETTTTEEEEE-------------EECSS---------CCCEEE--------------------------
T ss_pred EEeeCCEEEEEECCcCcEEEE-------------EeCCC---------CceEEe--------------------------
Confidence 988888999999998765552 22111 122232
Q ss_pred ccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccC-CCCcccEEEcCCCcEEEEecCCCeE
Q psy11781 1079 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSV 1157 (1228)
Q Consensus 1079 ~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~-~sqs~g~~~D~~G~LY~t~~~~~aI 1157 (1228)
.+++.||-+-- |.+++.++++-++- ...++ ++..|. -.....+... +|.||......+.|
T Consensus 112 ------~dg~~L~vSdg-s~~l~~iDp~t~~~----------~~~I~-V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I 172 (243)
T 3mbr_X 112 ------SDDSHLYMSDG-TAVIRKLDPDTLQQ----------VGSIK-VTAGGRPLDNLNELEWV-NGELLANVWLTSRI 172 (243)
T ss_dssp ------ECSSCEEEECS-SSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTTTEE
T ss_pred ------eCCCEEEEECC-CCeEEEEeCCCCeE----------EEEEE-EccCCcccccceeeEEe-CCEEEEEECCCCeE
Confidence 25677888875 66688887654432 11222 222221 0122334443 78999888899999
Q ss_pred EEEeCCCCccccCCeeEEEec----------CCceecCCceEEeCCC-cEEEEeCCchhhh
Q psy11781 1158 GCWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPND-NIWILSNKLHQYL 1207 (1228)
Q Consensus 1158 ~~wn~~~~~~~~~n~~~v~~~----------~~~L~wPd~l~id~dg-~Lyvlsn~l~~~~ 1207 (1228)
.+.|++|+.-. +.+... .....=|+|++.|+++ .|||+--++++.+
T Consensus 173 ~vIDp~tG~V~----~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~~~ 229 (243)
T 3mbr_X 173 ARIDPASGKVV----AWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPMLY 229 (243)
T ss_dssp EEECTTTCBEE----EEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSEEE
T ss_pred EEEECCCCCEE----EEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCcEE
Confidence 99999865432 222211 1123457899999865 6787777776643
No 78
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=98.08 E-value=0.015 Score=65.19 Aligned_cols=163 Identities=18% Similarity=0.243 Sum_probs=102.1
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCC
Q psy11781 501 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQ 580 (1228)
Q Consensus 501 PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~ 580 (1228)
-+|.+||++++++++++.... ....+++. .++.++|++......|.+||+.+++..+....
T Consensus 12 ~~v~v~d~~~~~~~~~~~~~~-------~~~~~~~s----~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~-------- 72 (391)
T 1l0q_A 12 DNISVIDVTSNKVTATIPVGS-------NPMGAVIS----PDGTKVYVANAHSNDVSIIDTATNNVIATVPA-------- 72 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-------SEEEEEEC----TTSSEEEEEEGGGTEEEEEETTTTEEEEEEEC--------
T ss_pred CEEEEEECCCCeEEEEeecCC-------CcceEEEC----CCCCEEEEECCCCCeEEEEECCCCeEEEEEEC--------
Confidence 359999999999998776533 24566665 24668999988888999999999876553311
Q ss_pred cceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcC
Q psy11781 581 STYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRN 660 (1228)
Q Consensus 581 ~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~ 660 (1228)
...+.+++++| +++.||+.......++.++.+ .
T Consensus 73 ------------~~~v~~~~~sp--------------------------------dg~~l~~~~~~~~~v~v~d~~---~ 105 (391)
T 1l0q_A 73 ------------GSSPQGVAVSP--------------------------------DGKQVYVTNMASSTLSVIDTT---S 105 (391)
T ss_dssp ------------SSSEEEEEECT--------------------------------TSSEEEEEETTTTEEEEEETT---T
T ss_pred ------------CCCccceEECC--------------------------------CCCEEEEEECCCCEEEEEECC---C
Confidence 11244566655 677888876655566666532 1
Q ss_pred CCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceE
Q psy11781 661 SSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLK 739 (1228)
Q Consensus 661 ~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~ 739 (1228)
.. .+..+.. + ....+++++.+|. ||++....+.|..||..++.. ...+.. . ..|.+++
T Consensus 106 ~~----------~~~~~~~-~--~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~----~~~~~~-~---~~~~~~~ 164 (391)
T 1l0q_A 106 NT----------VAGTVKT-G--KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAV----INTVSV-G---RSPKGIA 164 (391)
T ss_dssp TE----------EEEEEEC-S--SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE----EEEEEC-C---SSEEEEE
T ss_pred Ce----------EEEEEeC-C--CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcE----EEEEec-C---CCcceEE
Confidence 11 1111111 1 2356788887776 778888899999999872221 122221 1 2346777
Q ss_pred EcCCCc-EEEEe
Q psy11781 740 IDPNDN-IWILS 750 (1228)
Q Consensus 740 Id~dg~-LyVls 750 (1228)
+.++|. ||+..
T Consensus 165 ~~~dg~~l~~~~ 176 (391)
T 1l0q_A 165 VTPDGTKVYVAN 176 (391)
T ss_dssp ECTTSSEEEEEE
T ss_pred ECCCCCEEEEEe
Confidence 777774 55543
No 79
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.04 E-value=0.00043 Score=75.93 Aligned_cols=194 Identities=12% Similarity=0.100 Sum_probs=124.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.+|++..|. ++||+-- |. .+.-+|.++|++|+++++++.+|... |=..++++ +..+|+
T Consensus 22 ftqGL~~~~-~~Lyest-G~---------~g~S~v~~vD~~tgkv~~~~~l~~~~-----fgeGi~~~------~~~ly~ 79 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYEST-GE---------TGRSSVRKVDLETGRILQRAEVPPPY-----FGAGIVAW------RDRLIQ 79 (243)
T ss_dssp CEEEEEEET-TEEEEEE-CC---------TTSCEEEEEETTTCCEEEEEECCTTC-----CEEEEEEE------TTEEEE
T ss_pred ccccEEEEC-CEEEEEC-CC---------CCCceEEEEECCCCCEEEEEeCCCCc-----ceeEEEEe------CCEEEE
Confidence 468888886 8999852 22 23456999999999999999997642 22456776 468999
Q ss_pred ecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
.+-...-+.|||.++.+.-+ .|...+ -|.+|.+
T Consensus 80 ltw~~~~v~v~D~~tl~~~~-------------ti~~~~---------~Gwglt~------------------------- 112 (243)
T 3mbr_X 80 LTWRNHEGFVYDLATLTPRA-------------RFRYPG---------EGWALTS------------------------- 112 (243)
T ss_dssp EESSSSEEEEEETTTTEEEE-------------EEECSS---------CCCEEEE-------------------------
T ss_pred EEeeCCEEEEEECCcCcEEE-------------EEeCCC---------CceEEee-------------------------
Confidence 98778899999999876554 222211 2334433
Q ss_pred ccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccc-cccccceEEccCCcEEEEcCCCCeE
Q psy11781 629 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSV 707 (1228)
Q Consensus 629 ~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~-~~qs~G~a~D~~G~LY~t~~~~~aI 707 (1228)
+++.||.+-- |.+++.++++-++- ...++ ++..|. ......|.. .+|.||......+.|
T Consensus 113 -------dg~~L~vSdg-s~~l~~iDp~t~~~----------~~~I~-V~~~g~~~~~lNeLe~-~~G~lyanvw~s~~I 172 (243)
T 3mbr_X 113 -------DDSHLYMSDG-TAVIRKLDPDTLQQ----------VGSIK-VTAGGRPLDNLNELEW-VNGELLANVWLTSRI 172 (243)
T ss_dssp -------CSSCEEEECS-SSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEE-ETTEEEEEETTTTEE
T ss_pred -------CCCEEEEECC-CCeEEEEeCCCCeE----------EEEEE-EccCCcccccceeeEE-eCCEEEEEECCCCeE
Confidence 5677888874 66788887644321 11222 222221 112233444 378999999899999
Q ss_pred EEEeCCCCccCCCCeeEEEec----------CCceecCCceEEcCCC-cEEEEecCccc
Q psy11781 708 GCWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPND-NIWILSNKLHQ 755 (1228)
Q Consensus 708 ~~wn~~~~~~~~~n~~iV~~~----------d~~L~wPd~l~Id~dg-~LyVlsnrl~~ 755 (1228)
.+.|+.++. -.+.|... .+...=++||+.++++ .|||+--+.++
T Consensus 173 ~vIDp~tG~----V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~wp~ 227 (243)
T 3mbr_X 173 ARIDPASGK----VVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKRWPM 227 (243)
T ss_dssp EEECTTTCB----EEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETTCSE
T ss_pred EEEECCCCC----EEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCCCCc
Confidence 999998443 22333211 1223457899999865 57776666655
No 80
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.99 E-value=0.00049 Score=75.44 Aligned_cols=220 Identities=13% Similarity=0.133 Sum_probs=125.3
Q ss_pred CCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeE
Q psy11781 927 KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGL 1006 (1228)
Q Consensus 927 ~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gL 1006 (1228)
..+++||.+.+.- +|.+||+.++++++++.++.. .. .++++. ++.++|+++.+...|
T Consensus 8 ~~~~~~v~~~~~~------------~v~~~d~~~~~~~~~~~~~~~------~~-~~~~s~----dg~~l~~~~~~~~~i 64 (331)
T 3u4y_A 8 TSNFGIVVEQHLR------------RISFFSTDTLEILNQITLGYD------FV-DTAITS----DCSNVVVTSDFCQTL 64 (331)
T ss_dssp CCCEEEEEEGGGT------------EEEEEETTTCCEEEEEECCCC------EE-EEEECS----SSCEEEEEESTTCEE
T ss_pred CCCEEEEEecCCC------------eEEEEeCcccceeeeEEccCC------cc-eEEEcC----CCCEEEEEeCCCCeE
Confidence 4578899887643 799999999999998887532 22 556652 356899999988999
Q ss_pred EEEECCCCeE-EE-eecCCcCcCCCc-ceeEEcCEEEEeeCCcc---ceecCccccccccCCCccccccccccccCcccc
Q psy11781 1007 IVYDFFKNTS-YR-LTHPYMYPEPTQ-STYILDNLKFRWVDGIF---GMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD 1080 (1228)
Q Consensus 1007 IVydl~~g~s-wR-v~h~s~~pdP~~-~~~~i~G~~f~~~dGi~---GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d 1080 (1228)
.+||+++++. .+ +.+. ..|.. ..+.-+|+.+....+-- .+.+-.....+ .-. ..+ .+.+..
T Consensus 65 ~~~d~~~~~~~~~~~~~~---~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~----~~~--~~~----~~~~~~ 131 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEG---QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNK----FIS--TIP----IPYDAV 131 (331)
T ss_dssp EEEECSSSSCEEEEEEEC---SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTE----EEE--EEE----CCTTEE
T ss_pred EEEECCCCceeEEecccC---CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCC----eEE--EEE----CCCCcc
Confidence 9999999985 33 3321 01111 11111222211111000 11111110000 000 000 011223
Q ss_pred -ceecCCCceEEEEeCCCCc---eEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCc-EEEEecCCC
Q psy11781 1081 -KTIRDDQRYMYFHSLSSNR---HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKH 1155 (1228)
Q Consensus 1081 -i~ls~d~r~LYf~plss~~---ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~-LY~t~~~~~ 1155 (1228)
++++|++++||.....+.. +|.++. +..+ .+ .. .+.+ ..+ ....+++++.+|. ||++....+
T Consensus 132 ~~~~spdg~~l~~~~~~~~~~i~~~~~~~----~g~~--~~--~~--~~~~-~~~--~~~~~~~~spdg~~l~v~~~~~~ 198 (331)
T 3u4y_A 132 GIAISPNGNGLILIDRSSANTVRRFKIDA----DGVL--FD--TG--QEFI-SGG--TRPFNITFTPDGNFAFVANLIGN 198 (331)
T ss_dssp EEEECTTSSCEEEEEETTTTEEEEEEECT----TCCE--EE--EE--EEEE-CSS--SSEEEEEECTTSSEEEEEETTTT
T ss_pred ceEECCCCCEEEEEecCCCceEEEEEECC----CCcE--ee--cC--Cccc-cCC--CCccceEECCCCCEEEEEeCCCC
Confidence 8999999999999877555 444432 1111 00 01 1112 112 2367899999996 999999899
Q ss_pred eEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEe
Q psy11781 1156 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILS 1200 (1228)
Q Consensus 1156 aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvls 1200 (1228)
.|..||.+++... .....+.. -..|.+++++++|. ||+..
T Consensus 199 ~v~v~d~~~~~~~-~~~~~~~~----~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 199 SIGILETQNPENI-TLLNAVGT----NNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp EEEEEECSSTTSC-EEEEEEEC----SSCCCCEEECTTSSEEEEEC
T ss_pred eEEEEECCCCccc-ceeeeccC----CCCCceEEECCCCCEEEEEE
Confidence 9999999743320 00222221 25789999999997 66664
No 81
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.93 E-value=0.00028 Score=78.34 Aligned_cols=191 Identities=8% Similarity=0.039 Sum_probs=122.5
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
++++..| .++||+-....- +|.++|++|+++++++ +|+.. |=..+.++ +..+|++
T Consensus 57 tqGL~~~-~~~Ly~stG~~g------------~v~~iD~~Tgkv~~~~-l~~~~-----FgeGit~~------g~~Ly~l 111 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQG------------TLRQLSLESAQPVWME-RLGNI-----FAEGLASD------GERLYQL 111 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTT------------EEEECCSSCSSCSEEE-ECTTC-----CEEEEEEC------SSCEEEE
T ss_pred cceEEEE-CCEEEEEcCCCC------------EEEEEECCCCcEEeEE-CCCCc-----ceeEEEEe------CCEEEEE
Confidence 4677777 479998654332 4999999999999999 87642 22346665 5689999
Q ss_pred cCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccc
Q psy11781 1000 DVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 1079 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~ 1079 (1228)
+-...-+.|||.++.+--+- |.+.+ . |.+|.
T Consensus 112 tw~~~~v~V~D~~Tl~~~~t-------------i~~~~------e---GwGLt--------------------------- 142 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQRERT-------------TRYSG------E---GWGLC--------------------------- 142 (268)
T ss_dssp ESSSCEEEEEETTTTEEEEE-------------EECSS------C---CCCEE---------------------------
T ss_pred EccCCEEEEEECCcCcEEEE-------------EeCCC------c---eeEEe---------------------------
Confidence 88888999999999876652 22111 1 22232
Q ss_pred cceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccC-CCCcccEEEcCCCcEEEEecCCCeEE
Q psy11781 1080 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSVG 1158 (1228)
Q Consensus 1080 di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~-~sqs~g~~~D~~G~LY~t~~~~~aI~ 1158 (1228)
+|+++||-+- .+.+++.++++-++- ...++ ++..|. -.....+... +|.||.+....+.|.
T Consensus 143 -----~Dg~~L~vSd-Gs~~l~~iDp~T~~v----------~~~I~-V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 143 -----YWNGKLVRSD-GGTMLTFHEPDGFAL----------VGAVQ-VKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp -----EETTEEEEEC-SSSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred -----cCCCEEEEEC-CCCEEEEEcCCCCeE----------EEEEE-eCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 3678888887 467788887654432 12222 223221 1123345554 789999998999999
Q ss_pred EEeCCCCccccCCeeEEEec----------CCceecCCceEEeCCC-cEEEEeCCchhh
Q psy11781 1159 CWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPND-NIWILSNKLHQY 1206 (1228)
Q Consensus 1159 ~wn~~~~~~~~~n~~~v~~~----------~~~L~wPd~l~id~dg-~Lyvlsn~l~~~ 1206 (1228)
+.|++|++-. +.|-.. .....-++|++.|+++ .|||+=-++++.
T Consensus 205 vIDp~TG~V~----~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~ 259 (268)
T 3nok_A 205 EIDPATGTVV----GVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRL 259 (268)
T ss_dssp EECTTTCBEE----EEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEE
T ss_pred EEeCCCCcEE----EEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCce
Confidence 9999865432 222211 1122357999999865 677766666553
No 82
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.92 E-value=0.0014 Score=76.46 Aligned_cols=93 Identities=11% Similarity=0.124 Sum_probs=62.0
Q ss_pred CccCCCcccceEEeCCeEEEEeccCCCC----CCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCC
Q psy11781 854 FIPENNLPLGIGIWRSTIFLSFPKWKAG----IPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD 929 (1228)
Q Consensus 854 y~p~n~~p~gv~v~~gRiFvt~PR~~~g----vP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~g 929 (1228)
..|+...+.++.-..+|+||++..-..| ..-++..|+..... .++=.|- . ..+.++.++.++
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k---v~~~i~v-----g------~~~~~lavs~D~ 342 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE---RLAKFEM-----G------HEIDSINVSQDE 342 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC---EEEEEEE-----E------EEECEEEECSSS
T ss_pred ccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe---EEEEEEC-----C------CCcceEEECCCC
Confidence 5566666777755689999998531112 23588888863321 2222121 0 256788998887
Q ss_pred c--EEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCC
Q psy11781 930 R--LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTA 972 (1228)
Q Consensus 930 r--LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~ 972 (1228)
+ |++..-+.- .|.+||++|+++++++..+..
T Consensus 343 ~~~ly~tn~~~~------------~VsViD~~t~k~~~~i~~~~~ 375 (386)
T 3sjl_D 343 KPLLYALSTGDK------------TLYIHDAESGEELRSVNQLGH 375 (386)
T ss_dssp SCEEEEEETTTT------------EEEEEETTTCCEEEEECCCCS
T ss_pred CeEEEEEcCCCC------------eEEEEECCCCcEEEEecCCCC
Confidence 5 677775443 799999999999999988653
No 83
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=97.85 E-value=0.0022 Score=70.23 Aligned_cols=221 Identities=14% Similarity=0.137 Sum_probs=133.2
Q ss_pred CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCc-EEEEeCCCCCcccCcC
Q psy11781 418 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDTGVTNILSSIQ 496 (1228)
Q Consensus 418 ~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gR-LWVLDtG~~~~~~~~~ 496 (1228)
.+++|++-.. .-+|..++..... .+.-.+ .+...+ .+.++++|+ ||+.+.+.
T Consensus 9 ~~~~~v~~~~-----~~~v~~~d~~~~~---~~~~~~----------~~~~~~-~~~~s~dg~~l~~~~~~~-------- 61 (331)
T 3u4y_A 9 SNFGIVVEQH-----LRRISFFSTDTLE---ILNQIT----------LGYDFV-DTAITSDCSNVVVTSDFC-------- 61 (331)
T ss_dssp CCEEEEEEGG-----GTEEEEEETTTCC---EEEEEE----------CCCCEE-EEEECSSSCEEEEEESTT--------
T ss_pred CCEEEEEecC-----CCeEEEEeCcccc---eeeeEE----------ccCCcc-eEEEcCCCCEEEEEeCCC--------
Confidence 5788888643 2267777653211 111111 112345 788888886 99998863
Q ss_pred ccCCCEEEEEECCCCcE-EEEEECCCcccccCCCcee-EEEEeecCCCCeEEEEecCCCC--eEEEEEcCCCeEEEEcCC
Q psy11781 497 QLCPPKIMVFDLKTNTL-IRKYILPTAQVFEGSLFSN-IVTEVVEDCDHVFAYVNDVFRY--GLIVYDFFKNTSYRLTHP 572 (1228)
Q Consensus 497 ~~~~PKLvvfDL~td~v-i~~y~~p~~v~~~~S~l~d-i~VD~~~~c~~~~aYItDs~~~--gLIVyDl~~g~swRv~~~ 572 (1228)
-+|.+||+.++++ .+.+.... .... ++++. ++.++|.++.... .|.|||+.+++..+....
T Consensus 62 ----~~i~~~d~~~~~~~~~~~~~~~-------~~~~~~~~s~----dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 62 ----QTLVQIETQLEPPKVVAIQEGQ-------SSMADVDITP----DDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp ----CEEEEEECSSSSCEEEEEEECS-------SCCCCEEECT----TSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred ----CeEEEEECCCCceeEEecccCC-------CCccceEECC----CCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 2599999999997 65554422 2334 67762 5678886554444 899999999876553311
Q ss_pred CCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCc---
Q psy11781 573 YMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNR--- 649 (1228)
Q Consensus 573 s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~--- 649 (1228)
..+..+++++| ++++||+....+..
T Consensus 127 --------------------~~~~~~~~~sp--------------------------------dg~~l~~~~~~~~~~i~ 154 (331)
T 3u4y_A 127 --------------------PYDAVGIAISP--------------------------------NGNGLILIDRSSANTVR 154 (331)
T ss_dssp --------------------CTTEEEEEECT--------------------------------TSSCEEEEEETTTTEEE
T ss_pred --------------------CCCccceEECC--------------------------------CCCEEEEEecCCCceEE
Confidence 01123556655 67889988776555
Q ss_pred eEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCCCeEEEEeCCCCccCCCCeeEEEec
Q psy11781 650 HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS 728 (1228)
Q Consensus 650 ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~ 728 (1228)
+|.+.. ++.+ .+ .. .+.+ ..+ ..+.+++++.+|. ||++....+.|..||..++... ..+..+..
T Consensus 155 ~~~~~~----~g~~--~~--~~--~~~~-~~~--~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~~- 219 (331)
T 3u4y_A 155 RFKIDA----DGVL--FD--TG--QEFI-SGG--TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVGT- 219 (331)
T ss_dssp EEEECT----TCCE--EE--EE--EEEE-CSS--SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEEC-
T ss_pred EEEECC----CCcE--ee--cC--Cccc-cCC--CCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeeccC-
Confidence 444432 1211 00 11 1111 112 2468899998886 9999999999999999733220 00233321
Q ss_pred CCceecCCceEEcCCCc-EEEEe
Q psy11781 729 RDILNFPNDLKIDPNDN-IWILS 750 (1228)
Q Consensus 729 d~~L~wPd~l~Id~dg~-LyVls 750 (1228)
-..|.+++++++|. ||+..
T Consensus 220 ---~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 220 ---NNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp ---SSCCCCEEECTTSSEEEEEC
T ss_pred ---CCCCceEEECCCCCEEEEEE
Confidence 15789999999997 66654
No 84
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.80 E-value=0.00061 Score=75.62 Aligned_cols=191 Identities=9% Similarity=0.030 Sum_probs=121.6
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEe
Q psy11781 470 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 549 (1228)
Q Consensus 470 V~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYIt 549 (1228)
.+++..| .++||+-.... + +|.++|++|+++++++ +|+.. |-..++++ +..+|++
T Consensus 57 tqGL~~~-~~~Ly~stG~~-g-----------~v~~iD~~Tgkv~~~~-l~~~~-----FgeGit~~------g~~Ly~l 111 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQ-G-----------TLRQLSLESAQPVWME-RLGNI-----FAEGLASD------GERLYQL 111 (268)
T ss_dssp EEEEEEE-TTEEEEEETTT-T-----------EEEECCSSCSSCSEEE-ECTTC-----CEEEEEEC------SSCEEEE
T ss_pred cceEEEE-CCEEEEEcCCC-C-----------EEEEEECCCCcEEeEE-CCCCc-----ceeEEEEe------CCEEEEE
Confidence 5777777 48999975432 1 2999999999999999 87542 22356665 4689999
Q ss_pred cCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccc
Q psy11781 550 DVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNV 629 (1228)
Q Consensus 550 Ds~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1228)
+-...-+.|||.++.+.-+ .|.+.+ -|.+|.+
T Consensus 112 tw~~~~v~V~D~~Tl~~~~-------------ti~~~~---------eGwGLt~-------------------------- 143 (268)
T 3nok_A 112 TWTEGLLFTWSGMPPQRER-------------TTRYSG---------EGWGLCY-------------------------- 143 (268)
T ss_dssp ESSSCEEEEEETTTTEEEE-------------EEECSS---------CCCCEEE--------------------------
T ss_pred EccCCEEEEEECCcCcEEE-------------EEeCCC---------ceeEEec--------------------------
Confidence 8878899999999976654 222211 1334433
Q ss_pred cccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccc-cccccceEEccCCcEEEEcCCCCeEE
Q psy11781 630 DKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR-NTQASASAINSNGVMFYNLVTKHSVG 708 (1228)
Q Consensus 630 ~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~-~~qs~G~a~D~~G~LY~t~~~~~aI~ 708 (1228)
+++.||-+. .+.+++.++++-++- ...++ ++..|. ......+... +|.||.+....+.|.
T Consensus 144 ------Dg~~L~vSd-Gs~~l~~iDp~T~~v----------~~~I~-V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~ 204 (268)
T 3nok_A 144 ------WNGKLVRSD-GGTMLTFHEPDGFAL----------VGAVQ-VKLRGQPVELINELECA-NGVIYANIWHSSDVL 204 (268)
T ss_dssp ------ETTEEEEEC-SSSEEEEECTTTCCE----------EEEEE-CEETTEECCCEEEEEEE-TTEEEEEETTCSEEE
T ss_pred ------CCCEEEEEC-CCCEEEEEcCCCCeE----------EEEEE-eCCCCcccccccccEEe-CCEEEEEECCCCeEE
Confidence 567899987 466788887644321 12222 222221 1223445554 889999999999999
Q ss_pred EEeCCCCccCCCCeeEEEec----------CCceecCCceEEcCCC-cEEEEecCcccc
Q psy11781 709 CWNTKTKVYLPQTQDIVQTS----------RDILNFPNDLKIDPND-NIWILSNKLHQY 756 (1228)
Q Consensus 709 ~wn~~~~~~~~~n~~iV~~~----------d~~L~wPd~l~Id~dg-~LyVlsnrl~~~ 756 (1228)
+.|++++.- .+.|-.. .....-++||+.++++ .|||+=-+.++.
T Consensus 205 vIDp~TG~V----~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~Wp~~ 259 (268)
T 3nok_A 205 EIDPATGTV----VGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKLWPRL 259 (268)
T ss_dssp EECTTTCBE----EEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETTCSEE
T ss_pred EEeCCCCcE----EEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCCCCce
Confidence 999984432 2333211 1122357899999865 577765555543
No 85
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.73 E-value=0.0021 Score=71.29 Aligned_cols=251 Identities=11% Similarity=0.099 Sum_probs=134.3
Q ss_pred CCcccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCc-EEEEe
Q psy11781 408 NNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMD 485 (1228)
Q Consensus 408 n~~P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gR-LWVLD 485 (1228)
..-|.+++++ +|++|++--+. -.-++..++... +.++..-.. ......+..+.++++|+ |++.+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~----g~~~~~~~~-------~~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKED---DEGGIAAWQIDG----QTAHKLNTV-------VAPGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEET----TEEEEEEEE-------EEESCCCSEEEEETTTTEEEEEE
T ss_pred cCCcceEEEccCCeEEEEEecC---CCceEEEEEecC----CcEEEeeee-------ecCCCCCEEEEECCCCCEEEEEe
Confidence 3467889987 78888776431 122344444311 111111000 01123456678899886 88877
Q ss_pred CCCCCcccCcCccCCCEEEEEECCC-Cc--EEEEEECCCccc---ccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEE
Q psy11781 486 TGVTNILSSIQQLCPPKIMVFDLKT-NT--LIRKYILPTAQV---FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVY 559 (1228)
Q Consensus 486 tG~~~~~~~~~~~~~PKLvvfDL~t-d~--vi~~y~~p~~v~---~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVy 559 (1228)
.+. .+|.+||+.. ++ .+.++.....-. ...+....++++. ++. +|++|.+...|.||
T Consensus 105 ~~~------------~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp----dg~-l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 105 YHK------------GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP----DNR-LAVIDLGSDKVYVY 167 (347)
T ss_dssp TTT------------TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT----TSC-EEEEETTTTEEEEE
T ss_pred CCC------------CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC----CCc-EEEEeCCCCEEEEE
Confidence 532 2488899853 33 333333321100 0123455677762 234 99999999999999
Q ss_pred EcC-CCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCc
Q psy11781 560 DFF-KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQR 638 (1228)
Q Consensus 560 Dl~-~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r 638 (1228)
|+. +|+.-.+.. +.. ....+..+++++ |+|+
T Consensus 168 ~~~~~g~~~~~~~-----------~~~-----~~g~~p~~~~~s--------------------------------pdg~ 199 (347)
T 3hfq_A 168 NVSDAGQLSEQSV-----------LTM-----EAGFGPRHLVFS--------------------------------PDGQ 199 (347)
T ss_dssp EECTTSCEEEEEE-----------EEC-----CTTCCEEEEEEC--------------------------------TTSS
T ss_pred EECCCCcEEEeee-----------EEc-----CCCCCCceEEEC--------------------------------CCCC
Confidence 998 454332210 000 000123345554 4788
Q ss_pred eEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccc----cccccceEEccCCc-EEEEcCCCCeEEEEeCC
Q psy11781 639 YMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR----NTQASASAINSNGV-MFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 639 ~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~----~~qs~G~a~D~~G~-LY~t~~~~~aI~~wn~~ 713 (1228)
+||+....+..+..+..+. ....+ ..++.+...+. .....+++++.+|. ||++....+.|..|+..
T Consensus 200 ~l~v~~~~~~~v~v~~~~~-~~g~~--------~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~ 270 (347)
T 3hfq_A 200 YAFLAGELSSQIASLKYDT-QTGAF--------TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVT 270 (347)
T ss_dssp EEEEEETTTTEEEEEEEET-TTTEE--------EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEEC
T ss_pred EEEEEeCCCCEEEEEEecC-CCCce--------EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEEC
Confidence 8999766655544333211 00110 01111111110 12367799999996 88998889999999975
Q ss_pred CCccCCCCeeEEEecCCceecCCceEEcCCCc-EEEEe
Q psy11781 714 TKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILS 750 (1228)
Q Consensus 714 ~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~-LyVls 750 (1228)
.. .....+..-...-.+|.+++++++|. ||+..
T Consensus 271 -~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 304 (347)
T 3hfq_A 271 -AD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVN 304 (347)
T ss_dssp -GG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEE
T ss_pred -CC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEE
Confidence 21 12334432222235789999999996 66654
No 86
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.72 E-value=0.0021 Score=73.50 Aligned_cols=250 Identities=7% Similarity=0.038 Sum_probs=129.3
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 465 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 465 ~~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
++|..+.++.++++|||||.|.+ + +|.+++ +++......++ -.......+..|+++... -.++
T Consensus 28 ~~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~i~--~g~~~~~~~~~-v~~~g~~~p~gia~~pdf-~~~g 90 (352)
T 2ism_A 28 GGLEVPWALAFLPDGGMLIAERP--G-----------RIRLFR--EGRLSTYAELS-VYHRGESGLLGLALHPRF-PQEP 90 (352)
T ss_dssp CCCSCEEEEEECTTSCEEEEETT--T-----------EEEEEE--TTEEEEEEECC-CCCSTTCSEEEEEECTTT-TTSC
T ss_pred CCCCCceEEEEcCCCeEEEEeCC--C-----------eEEEEE--CCCccEeecce-EeecCCCCceeEEECCCC-CCCC
Confidence 45888999999999999999975 1 488888 44433223454 112234678899998210 0148
Q ss_pred EEEEecCCC-----CeEEEEEcCCCe--EEEE-cC--C---CCCcCCCCcceEEcCeEeeecCCcceeecCcccCC----
Q psy11781 545 FAYVNDVFR-----YGLIVYDFFKNT--SYRL-TH--P---YMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG---- 607 (1228)
Q Consensus 545 ~aYItDs~~-----~gLIVyDl~~g~--swRv-~~--~---s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~---- 607 (1228)
.+|++++.. ..|..|++..++ ..++ .. + .-...|....|. +||-+-++.+.....
T Consensus 91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~--------pdG~Lyv~~G~~~~~~~~~ 162 (352)
T 2ism_A 91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFG--------PDGMLYVTTGEVYERELAQ 162 (352)
T ss_dssp EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEEC--------TTSCEEEECCCTTCGGGGG
T ss_pred EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEEC--------CCCCEEEEECCCCCCcccc
Confidence 999999864 689999998652 1222 11 1 000111111111 122222222110000
Q ss_pred cccCCCccccccccc---------------c----ccCcc-cc-ccccCCCceEEEeeCCCCc--------eEEEechhh
Q psy11781 608 KYKRHPYEYYHYNVH---------------H----YNGTN-VD-KTIRDDQRYMYFHSLSSNR--------HYYVSTTDL 658 (1228)
Q Consensus 608 ~~~~~~~~~~~~~~~---------------~----~~~~~-~~-i~is~d~r~LYf~~lss~~--------ly~V~T~~L 658 (1228)
.-..+...+++.... . ..++. .. +++++++..||.+-..... +..|..
T Consensus 163 d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~--- 239 (352)
T 2ism_A 163 DLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVP--- 239 (352)
T ss_dssp CTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECT---
T ss_pred CCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEecc---
Confidence 000000112211000 0 00111 22 7888866779998766554 333321
Q ss_pred cCCCCC-CC-------ccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccC---CCCeeEEEe
Q psy11781 659 RNSSRY-VN-------SSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYL---PQTQDIVQT 727 (1228)
Q Consensus 659 r~~~~~-~~-------~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~---~~n~~iV~~ 727 (1228)
+..+ +. .......+..+. ....+.|+++ .+|.||+++...+.|.+.+.+ +.-. ......+..
T Consensus 240 --G~nyGwp~~~g~~~~~~~~~p~~~~~---~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~-~~~~~~~~~~~~~~~~ 312 (352)
T 2ism_A 240 --GGNYGWPRVVGRGNDPRYRDPLYFWP---QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLE-GERGRWRVLRVETALS 312 (352)
T ss_dssp --TCBCCTTTCCSCCCCTTSCCCSEECT---TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEE-EETTEEEEEEEEEEEE
T ss_pred --CCcCCCCcccCCCCCCCCcCCeEecC---CCCCCcceEE-ECCEEEEEECCCCEEEEEEEC-CCCcceeecchheecc
Confidence 1100 00 000011122221 1234688888 689999999999999999876 2210 000111111
Q ss_pred cCCceecCCceEEcCCCcEEEEecC
Q psy11781 728 SRDILNFPNDLKIDPNDNIWILSNK 752 (1228)
Q Consensus 728 ~d~~L~wPd~l~Id~dg~LyVlsnr 752 (1228)
.+.-|.++++++||.|||++..
T Consensus 313 ---~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 313 ---GFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp ---SSCCEEEEEECTTSCEEEEECS
T ss_pred ---cCCCeeEEEECCCCcEEEEEeC
Confidence 2345889999999999999864
No 87
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=97.70 E-value=0.0035 Score=69.45 Aligned_cols=250 Identities=10% Similarity=0.103 Sum_probs=133.7
Q ss_pred CCcccceEEe-CCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCCc-EEEEe
Q psy11781 858 NNLPLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMD 935 (1228)
Q Consensus 858 n~~p~gv~v~-~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~gr-LWVLD 935 (1228)
..-|.++++. +|++|++--.. -.-++..++.. .+ .++..-... .....+..+.++++|+ |++.+
T Consensus 39 ~~~p~~~a~spdg~l~~~~~~~---~~~~v~~~~~~-~g---~~~~~~~~~-------~~~~~p~~~a~spdg~~l~~~~ 104 (347)
T 3hfq_A 39 TQNPTYLALSAKDCLYSVDKED---DEGGIAAWQID-GQ---TAHKLNTVV-------APGTPPAYVAVDEARQLVYSAN 104 (347)
T ss_dssp CSCCCCEEECTTCEEEEEEEET---TEEEEEEEEEE-TT---EEEEEEEEE-------EESCCCSEEEEETTTTEEEEEE
T ss_pred cCCcceEEEccCCeEEEEEecC---CCceEEEEEec-CC---cEEEeeeee-------cCCCCCEEEEECCCCCEEEEEe
Confidence 3457788887 78877775431 12234334321 11 111100000 0123355678888887 78777
Q ss_pred CCCCCccccccccCCCEEEEEECCC-Cc--EEEEEECCCCcc---cCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEE
Q psy11781 936 TGVTNILSSIQQLCPPKIMVFDLKT-NT--LIRKYILPTAQV---FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVY 1009 (1228)
Q Consensus 936 tG~~~~~~~~~~~~~pKLvvfDL~t-d~--lir~y~~p~~~~---~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVy 1009 (1228)
.+.. .|.+||+.. ++ .+.++.....-. ...+....++++. ++. +|++|.+...|.||
T Consensus 105 ~~~~------------~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp----dg~-l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 105 YHKG------------TAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP----DNR-LAVIDLGSDKVYVY 167 (347)
T ss_dssp TTTT------------EEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT----TSC-EEEEETTTTEEEEE
T ss_pred CCCC------------EEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC----CCc-EEEEeCCCCEEEEE
Confidence 5322 688899853 33 334343321100 0123355566652 234 99999999999999
Q ss_pred ECC-CCeEEEeecCCcCcCCCcceeEEcCEEEEeeC--CccceecCccccccccCCCccccccccccccCccccceecCC
Q psy11781 1010 DFF-KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVD--GIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDD 1086 (1228)
Q Consensus 1010 dl~-~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~d--Gi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d 1086 (1228)
|+. +|+...+.. +.... +..+ +++|||
T Consensus 168 ~~~~~g~~~~~~~------------------~~~~~g~~p~~--------------------------------~~~spd 197 (347)
T 3hfq_A 168 NVSDAGQLSEQSV------------------LTMEAGFGPRH--------------------------------LVFSPD 197 (347)
T ss_dssp EECTTSCEEEEEE------------------EECCTTCCEEE--------------------------------EEECTT
T ss_pred EECCCCcEEEeee------------------EEcCCCCCCce--------------------------------EEECCC
Confidence 998 454322210 00000 1111 456678
Q ss_pred CceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccC----CCCcccEEEcCCCc-EEEEecCCCeEEEEe
Q psy11781 1087 QRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFR----NTQASASAINSNGV-MFYNLVTKHSVGCWN 1161 (1228)
Q Consensus 1087 ~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~----~sqs~g~~~D~~G~-LY~t~~~~~aI~~wn 1161 (1228)
+++||+....+..+....... .... + ..++.+...+. .....+++++.+|. ||++....+.|..|+
T Consensus 198 g~~l~v~~~~~~~v~v~~~~~-~~g~-------~-~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~ 268 (347)
T 3hfq_A 198 GQYAFLAGELSSQIASLKYDT-QTGA-------F-TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFA 268 (347)
T ss_dssp SSEEEEEETTTTEEEEEEEET-TTTE-------E-EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEEecC-CCCc-------e-EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEE
Confidence 999999776665554443211 0011 0 01111111110 02356799999996 889988889999999
Q ss_pred CCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEeC
Q psy11781 1162 TKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSN 1201 (1228)
Q Consensus 1162 ~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn 1201 (1228)
.+ .. .....+..-...-.+|.+++++++|. ||+...
T Consensus 269 ~~-~~---g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 305 (347)
T 3hfq_A 269 VT-AD---GHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQ 305 (347)
T ss_dssp EC-GG---GCEEEEEEEECSSSCCCEEEECTTSSEEEEEET
T ss_pred EC-CC---CcEEEeEEEecCCCCcCeEEECCCCCEEEEEEc
Confidence 75 21 12333332222234799999999995 776653
No 88
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.68 E-value=0.0029 Score=72.38 Aligned_cols=258 Identities=9% Similarity=0.033 Sum_probs=130.4
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCce
Q psy11781 915 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 994 (1228)
Q Consensus 915 ~~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~ 994 (1228)
++|..+.+|.++++|+|||.|.+ + +|.+++ +++......+| -.......+..|+++... -.++
T Consensus 28 ~~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~i~--~g~~~~~~~~~-v~~~g~~~p~gia~~pdf-~~~g 90 (352)
T 2ism_A 28 GGLEVPWALAFLPDGGMLIAERP--G-----------RIRLFR--EGRLSTYAELS-VYHRGESGLLGLALHPRF-PQEP 90 (352)
T ss_dssp CCCSCEEEEEECTTSCEEEEETT--T-----------EEEEEE--TTEEEEEEECC-CCCSTTCSEEEEEECTTT-TTSC
T ss_pred CCCCCceEEEEcCCCeEEEEeCC--C-----------eEEEEE--CCCccEeecce-EeecCCCCceeEEECCCC-CCCC
Confidence 45778899999999999999976 2 788898 44433333455 122234678889987311 0147
Q ss_pred EEEEEcCCC-----CeEEEEECCCCe--EEEee---cC---CcCcCCCcceeEEcCEEEEeeCCccc-------------
Q psy11781 995 FAYVNDVFR-----YGLIVYDFFKNT--SYRLT---HP---YMYPEPTQSTYILDNLKFRWVDGIFG------------- 1048 (1228)
Q Consensus 995 ~aYItD~~~-----~gLIVydl~~g~--swRv~---h~---s~~pdP~~~~~~i~G~~f~~~dGi~G------------- 1048 (1228)
++|+++... ..|.+|++..++ ..+++ -+ .-...|....|.-+|. +-..+|-.+
T Consensus 91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G~~~~~~~~~d~~~~~g 169 (352)
T 2ism_A 91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTGEVYERELAQDLASLGG 169 (352)
T ss_dssp EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECCCTTCGGGGGCTTCSSS
T ss_pred EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEECCCCCCccccCCCCCce
Confidence 999999864 689999998653 22222 11 1011121111111231 111111100
Q ss_pred --eecCccccccccCCCccccc----cccccccCc-ccc-ceecCCCceEEEEeCCCCc--------eEEEecchhcCCc
Q psy11781 1049 --MAISPELSGKYKRHPYEYYH----YNVHHYNGT-NVD-KTIRDDQRYMYFHSLSSNR--------HYYVSTTDLRNSS 1112 (1228)
Q Consensus 1049 --iaLsp~~~~~~~~~p~~~~~----~~~~~~~~~-~~d-i~ls~d~r~LYf~plss~~--------ly~V~T~~Lr~~~ 1112 (1228)
+.+.+... --..++|.. -...-..++ +.. |+++++...||.+-..... +..|..-- +-.
T Consensus 170 ~I~ri~~dG~---~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~--nyG 244 (352)
T 2ism_A 170 KILRLTPEGE---PAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGG--NYG 244 (352)
T ss_dssp EEEEECTTSS---BCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTC--BCC
T ss_pred EEEEEcCCCC---CCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCC--cCC
Confidence 00101000 000001000 000000011 123 8899976779988766554 34442110 000
Q ss_pred ---ccC--CccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCccc---cCCeeEEEecCCceec
Q psy11781 1113 ---RYV--NSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYL---PQTQDIVQTSRDILNF 1184 (1228)
Q Consensus 1113 ---~~~--~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~---~~n~~~v~~~~~~L~w 1184 (1228)
... ........+..+.. ...+.|+++ .+|.||+++...+.|.+.+.+ +.-. ......+. + .+..
T Consensus 245 wp~~~g~~~~~~~~~p~~~~~~---~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~-~~~~~~~~~~~~~~~-~--~~~r 316 (352)
T 2ism_A 245 WPRVVGRGNDPRYRDPLYFWPQ---GFPPGNLAF-FRGDLYVAGLRGQALLRLVLE-GERGRWRVLRVETAL-S--GFGR 316 (352)
T ss_dssp TTTCCSCCCCTTSCCCSEECTT---CCCEEEEEE-ETTEEEEEETTTTEEEEEEEE-EETTEEEEEEEEEEE-E--SSCC
T ss_pred CCcccCCCCCCCCcCCeEecCC---CCCCcceEE-ECCEEEEEECCCCEEEEEEEC-CCCcceeecchheec-c--cCCC
Confidence 000 00001111222211 123678888 679999999999999998775 2210 00011122 1 2346
Q ss_pred CCceEEeCCCcEEEEeCCc
Q psy11781 1185 PNDLKIDPNDNIWILSNKL 1203 (1228)
Q Consensus 1185 Pd~l~id~dg~Lyvlsn~l 1203 (1228)
|.++++++||.|||++..-
T Consensus 317 p~~v~~~pdG~lyv~~~~~ 335 (352)
T 2ism_A 317 LREVQVGPDGALYVTTSNR 335 (352)
T ss_dssp EEEEEECTTSCEEEEECST
T ss_pred eeEEEECCCCcEEEEEeCC
Confidence 8999999999999998653
No 89
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.68 E-value=0.056 Score=67.51 Aligned_cols=80 Identities=8% Similarity=0.116 Sum_probs=53.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+..|..|+|||.-. + -|..||.++++. +.+.+|.........+..|..|- .++.+||
T Consensus 147 ~i~~i~~d~~g~lWigt~---~-----------Gl~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~----~~~~lWi 207 (758)
T 3ott_A 147 TIYSIIRTKDNQIYVGTY---N-----------GLCRYIPSNGKF-EGIPLPVHSSQSNLFVNSLLEDT----TRQCVWI 207 (758)
T ss_dssp CEEEEEECTTCCEEEEET---T-----------EEEEEETTTTEE-EEECCCCCTTCSSCCEEEEEEET----TTTEEEE
T ss_pred eEEEEEEcCCCCEEEEeC---C-----------CHhhCccCCCce-EEecCCCccccccceeEEEEEEC----CCCEEEE
Confidence 578889999999999532 1 188999988775 34555543211223456677771 2457888
Q ss_pred ecCCCCeEEEEEcCCCeEEEE
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv 569 (1228)
.-. .||..||..+++..++
T Consensus 208 gt~--~Gl~~~~~~~~~~~~~ 226 (758)
T 3ott_A 208 GTE--GYLFQYFPSTGQIKQT 226 (758)
T ss_dssp EEE--EEEEEEETTTTEEEEE
T ss_pred EEC--CCCeEEcCCCCeEEec
Confidence 653 4899999998876553
No 90
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.55 E-value=0.0018 Score=76.60 Aligned_cols=284 Identities=11% Similarity=0.038 Sum_probs=151.0
Q ss_pred eCCeEEEEeccCCCCCCcEEEEEECCCCCCCCccccCCCCCcCCCCCCCcceEEEEEEEeCCC-cEEEEeCCCCCccccc
Q psy11781 867 WRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSI 945 (1228)
Q Consensus 867 ~~gRiFvt~PR~~~gvP~TLa~v~~~~~~~sP~l~PYP~~~wn~~~~c~~lvSV~~v~iD~~g-rLWVLDtG~~~~~~~~ 945 (1228)
+..|+||+-..+.... -+|..|+..... .+.-.|- +. .. ++.++.+| +|||.+++.....
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~~---vv~~I~v----------G~-~P-gia~SpDgk~lyVan~~~~~~~--- 143 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTGR---ILGMTDG----------GF-LP-HPVAAEDGSFFAQASTVFERIA--- 143 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTTE---EEEEEEE----------CS-SC-EEEECTTSSCEEEEEEEEEETT---
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCCE---EEEEEEC----------CC-CC-ceEECCCCCEEEEEeccccccc---
Confidence 4689999997653222 578888753221 2222221 11 24 77888877 5999987421100
Q ss_pred cccCCCEEEEEECCCCcEEEEEECCC-CcccCCCcceeeEEEeecCCCceEEEEEcCC-CCeEEEEECCCCeEEEee-cC
Q psy11781 946 QQLCPPKIMVFDLKTNTLIRKYILPT-AQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYRLT-HP 1022 (1228)
Q Consensus 946 ~~~~~pKLvvfDL~td~lir~y~~p~-~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-~~gLIVydl~~g~swRv~-h~ 1022 (1228)
.-.....|.+||+.|+++++++.+|. .-...+..-..++++. ++.++|+++.. ...|.|+|+++++.-+-. -+
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp----DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP----DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT----TSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC----CCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 00012379999999999999999972 1111123345677763 57899999875 678999999999875432 11
Q ss_pred C---cCcCCCcceeEEcCEEEEeeCCcc-ceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeCCCC
Q psy11781 1023 Y---MYPEPTQSTYILDNLKFRWVDGIF-GMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSN 1098 (1228)
Q Consensus 1023 s---~~pdP~~~~~~i~G~~f~~~dGi~-GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~ 1098 (1228)
. ..|+... .|. . ...||.. -+.+ ..... ..+. ...++... ..+...++++++++.+||.+..+
T Consensus 220 g~~~~~p~g~~-~~v----~-~~~dG~~~~V~~-~~~~v-~~~~-~~~~~v~~---~p~~~~~~~~~dg~~~~~~s~~g- 286 (426)
T 3c75_H 220 DCYHIFPASPT-VFY----M-NCRDGSLARVDF-ADGET-KVTN-TEVFHTED---ELLINHPAFSLRSGRLVWPTYTG- 286 (426)
T ss_dssp SEEEEEEEETT-EEE----E-EETTSSEEEEEC-CTTCC-EEEE-CCCCSCTT---SCBCSCCEECTTTCEEEEEBTTS-
T ss_pred CceeeccCCCc-EEE----E-EcCCCCEEEEEC-CCCcE-EEEe-eeeeccCC---CceeeEeeecCCCCEEEEEeCCC-
Confidence 0 1111000 000 0 0122211 1111 00000 0000 00010000 00111245688999999999865
Q ss_pred ceEEEecchhcCCcccCCccccccceE-------EeccccCCCCcccEEEcCC-CcEEEEecC---------CCeEEEEe
Q psy11781 1099 RHYYVSTTDLRNSSRYVNSSDIDEYFH-------YLGSRFRNTQASASAINSN-GVMFYNLVT---------KHSVGCWN 1161 (1228)
Q Consensus 1099 ~ly~V~T~~Lr~~~~~~~~~~~~~~v~-------~lG~rg~~sqs~g~~~D~~-G~LY~t~~~---------~~aI~~wn 1161 (1228)
++|.++..- ... .....++ ..|.++ .....++++++ +.||+++-+ .+.|..+|
T Consensus 287 ~V~ViD~~~---~~~-----~v~~~~~~~~~~~i~~g~~p--~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID 356 (426)
T 3c75_H 287 KIFQADLTA---EGA-----TFRAPIEALTEAERADDWRP--GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLN 356 (426)
T ss_dssp EEEEEEECS---SCE-----EECCCEESSCTTTGGGTEEE--CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEE
T ss_pred cEEEEeccC---Cce-----EEeeeeeecccccccccccc--CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEE
Confidence 699998631 110 0001111 122222 11224788855 578988642 35799999
Q ss_pred CCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEeCCch
Q psy11781 1162 TKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNKLH 1204 (1228)
Q Consensus 1162 ~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn~l~ 1204 (1228)
+.|. +++.+= +-=..|.++.+++||. +++++|...
T Consensus 357 ~~T~-------kvv~~I-~vg~~P~gia~spDg~~~lyv~n~~s 392 (426)
T 3c75_H 357 AETG-------ERINKI-ELGHEIDSINVSQDAEPLLYALSAGT 392 (426)
T ss_dssp TTTC-------CEEEEE-EEEEEECEEEECCSSSCEEEEEETTT
T ss_pred CCCC-------eEEEEE-ECCCCcCeEEEccCCCEEEEEEcCCC
Confidence 9833 223211 1112599999999998 888887643
No 91
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.49 E-value=0.023 Score=64.98 Aligned_cols=135 Identities=10% Similarity=-0.001 Sum_probs=75.2
Q ss_pred ccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEcc----CCcEEEEcCC---
Q psy11781 631 KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS----NGVMFYNLVT--- 703 (1228)
Q Consensus 631 i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~----~G~LY~t~~~--- 703 (1228)
|+.+++|+.||+.-+.+ +++++.. +......-.++ ..+..-|+.| .-|++++. +|.||++...
T Consensus 23 i~~~pdG~~l~V~e~~G-~i~~~~~----~g~~~~~~~~~-~~v~~~g~~g----~~gia~~pdf~~~g~lYv~~~~~~~ 92 (353)
T 2g8s_A 23 LAFLPDNHGMLITLRGG-ELRHWQA----GKGLSAPLSGV-PDVWAHGQGG----LLDVVLAPDFAQSRRIWLSYSEVGD 92 (353)
T ss_dssp EEECSTTCCEEEEETTT-EEEEEET----TTEECCCCBSC-CCCCCSTTCS----EEEEEECTTHHHHCEEEEEEEEECS
T ss_pred EEEcCCCCEEEEEeCCc-eEEEEeC----CCceeeEecCC-cccccCCCCC----ceeEEECCCCCCCCEEEEEEeCCCC
Confidence 34445777799998875 6888863 22110000000 0111113333 47899985 7999999765
Q ss_pred ----CCeEEEEeCCCCccCCCCeeEEEecC----CceecCCceEEcCCCcEEEEecCccccccCCCCCccccEEEEEEec
Q psy11781 704 ----KHSVGCWNTKTKVYLPQTQDIVQTSR----DILNFPNDLKIDPNDNIWILSNKLHQYLYGFLDFNVYNYRILVANS 775 (1228)
Q Consensus 704 ----~~aI~~wn~~~~~~~~~n~~iV~~~d----~~L~wPd~l~Id~dg~LyVlsnrl~~~~~~~~d~~e~nfrI~r~~v 775 (1228)
.++|.+++.....-.....++|...- ....++.+|.+++||+|||....-..-- ...|.+...=+|+|++.
T Consensus 93 ~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~-~~q~~~~~~g~I~ri~~ 171 (353)
T 2g8s_A 93 DGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRP-TAQDLDKLQGKLVRLTD 171 (353)
T ss_dssp SSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGG-GGGCTTSCTTEEEEEET
T ss_pred CCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCC-ccCCCCCCCeEEEEECC
Confidence 56899997641110001233333221 2456899999999999999973221100 11133333447889875
Q ss_pred c
Q psy11781 776 N 776 (1228)
Q Consensus 776 ~ 776 (1228)
+
T Consensus 172 d 172 (353)
T 2g8s_A 172 Q 172 (353)
T ss_dssp T
T ss_pred C
Confidence 3
No 92
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.48 E-value=0.018 Score=65.90 Aligned_cols=252 Identities=8% Similarity=0.054 Sum_probs=130.9
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCccc-CCCcceeeEEEeecCCCc
Q psy11781 915 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVF-EGSLFSNIVTEVVEDCDH 993 (1228)
Q Consensus 915 ~~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~-~~S~l~di~VD~~~~c~~ 993 (1228)
.+|..+.+|.++++|+|||.|.. + +|.++| .+++ .....+| +.. ....+..|+++... ..+
T Consensus 26 ~~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~~d-~~G~-~~~~~~~--v~~~g~~g~~gia~~pdf-~~~ 87 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGRYLVTERP--G-----------RLVLIS-PSGK-KLVASFD--VANVGEAGLLGLALHPEF-PKK 87 (354)
T ss_dssp CSCSCEEEEEEEETTEEEEEETT--T-----------EEEEEC-SSCE-EEEEECC--CCCSTTCSEEEEEECTTT-TTS
T ss_pred CCCCCCeEEEEcCCCeEEEEeCC--C-----------EEEEEe-CCCc-eEeeccc--eeecCCCceeeEEeCCCC-CcC
Confidence 45788899999999999999986 2 788887 4555 2223455 222 23568889997321 125
Q ss_pred eEEEEEcCC---C----CeEEEEECCCC--e--EEEee-c--C-CcCcCCCcceeEEcCEEEEeeCCccceecCcccc--
Q psy11781 994 VFAYVNDVF---R----YGLIVYDFFKN--T--SYRLT-H--P-YMYPEPTQSTYILDNLKFRWVDGIFGMAISPELS-- 1056 (1228)
Q Consensus 994 ~~aYItD~~---~----~gLIVydl~~g--~--swRv~-h--~-s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~-- 1056 (1228)
+.+|++++. . ..|..+++..+ + ..+++ . + .-...+....|. +||.+-++.+....
T Consensus 88 g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~--------pDG~Lyvt~G~~~~~~ 159 (354)
T 3a9g_A 88 SWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFG--------PDGMLYITTGDAADPR 159 (354)
T ss_dssp CEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEEC--------TTSCEEEECCCTTCGG
T ss_pred CEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEEC--------CCCcEEEEECCCCCCc
Confidence 899999874 3 67999998765 1 23332 1 1 000011111111 22222222211000
Q ss_pred ----------ccccCCC-------ccccccccccccCc-ccc-ceecCCCceEEEEeCCCCc---eEEEecchhcCCccc
Q psy11781 1057 ----------GKYKRHP-------YEYYHYNVHHYNGT-NVD-KTIRDDQRYMYFHSLSSNR---HYYVSTTDLRNSSRY 1114 (1228)
Q Consensus 1057 ----------~~~~~~p-------~~~~~~~~~~~~~~-~~d-i~ls~d~r~LYf~plss~~---ly~V~T~~Lr~~~~~ 1114 (1228)
.-.|-+| ++|....... .++ +.. |+++++...||.+-....+ +..|..- .+-. |
T Consensus 160 ~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a-~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G--~nyG-w 235 (354)
T 3a9g_A 160 LAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWS-YGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKG--GNYG-W 235 (354)
T ss_dssp GGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEE-ECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTT--CBCC-T
T ss_pred cccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEE-EccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCC--CcCC-C
Confidence 0000000 0000000000 111 223 7888866678887666543 3333210 0100 0
Q ss_pred ---C---CccccccceEEeccccCCCCcccEEE-------cCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCc
Q psy11781 1115 ---V---NSSDIDEYFHYLGSRFRNTQASASAI-------NSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDI 1181 (1228)
Q Consensus 1115 ---~---~~~~~~~~v~~lG~rg~~sqs~g~~~-------D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~ 1181 (1228)
. ........+..++.. .....|+++ +-+|.||+++.....|.+.+.+ +.-.......+.. ..
T Consensus 236 p~~~g~~~~~~~~~p~~~~~~~--~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~-~~g~~~~~~~~~~--~~ 310 (354)
T 3a9g_A 236 PLATGKAGRGEFVDPVIDTGSE--TWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFG-DNMEVRKISTFFK--NV 310 (354)
T ss_dssp TTCCSCCCCTTSCCCSEECTTC--CCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEEC-GGGCEEEEEEECT--TT
T ss_pred CcccCCCCCCCCcCCEeecCCC--CcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEEC-CCCcccceeeecc--CC
Confidence 0 000011222333221 124788888 5789999999999999999887 3210001122221 12
Q ss_pred eecCCceEEeCCCcEEEEeC
Q psy11781 1182 LNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1182 L~wPd~l~id~dg~Lyvlsn 1201 (1228)
...|.++++++||.|||++.
T Consensus 311 ~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 311 FGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp SCCEEEEEECTTSCEEEEEC
T ss_pred CCCeeEEEECCCCcEEEEEe
Confidence 44689999999999999985
No 93
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.45 E-value=0.0039 Score=68.68 Aligned_cols=190 Identities=9% Similarity=-0.009 Sum_probs=116.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.+..+.++++|++++ ++. ..|.+||. +++++.++..+.. ..+.+..+. .++..+|
T Consensus 38 ~~~~~~~~pdG~ilv--s~~------------~~V~~~d~-~G~~~W~~~~~~~-----~~~~~~~~~-----~dG~~lv 92 (276)
T 3no2_A 38 ECNSVAATKAGEILF--SYS------------KGAKMITR-DGRELWNIAAPAG-----CEMQTARIL-----PDGNALV 92 (276)
T ss_dssp CCCEEEECTTSCEEE--ECB------------SEEEEECT-TSCEEEEEECCTT-----CEEEEEEEC-----TTSCEEE
T ss_pred CCcCeEECCCCCEEE--eCC------------CCEEEECC-CCCEEEEEcCCCC-----ccccccEEC-----CCCCEEE
Confidence 355667888999999 221 23999999 8999999998532 123344443 4677889
Q ss_pred ecCC-CCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCc
Q psy11781 549 NDVF-RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 627 (1228)
Q Consensus 549 tDs~-~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1228)
++.+ ...|+.+|......|++.-..-. .+. +.. ..++
T Consensus 93 ~~~~~~~~v~~vd~~Gk~l~~~~~~~~~----------~~~-~~~---~~~v---------------------------- 130 (276)
T 3no2_A 93 AWCGHPSTILEVNMKGEVLSKTEFETGI----------ERP-HAQ---FRQI---------------------------- 130 (276)
T ss_dssp EEESTTEEEEEECTTSCEEEEEEECCSC----------SSG-GGS---CSCC----------------------------
T ss_pred EecCCCCEEEEEeCCCCEEEEEeccCCC----------Ccc-ccc---ccCc----------------------------
Confidence 9887 77888899866666775421000 000 000 0011
Q ss_pred cccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeE
Q psy11781 628 NVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSV 707 (1228)
Q Consensus 628 ~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI 707 (1228)
..+++|+.|+-.. ...+++.++. + .+.+..++.. +.+-+...+.+|+++++....+.|
T Consensus 131 ----~~~~~G~~lv~~~-~~~~v~~~d~----~----------G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v 188 (276)
T 3no2_A 131 ----NKNKKGNYLVPLF-ATSEVREIAP----N----------GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCF 188 (276)
T ss_dssp ----EECTTSCEEEEET-TTTEEEEECT----T----------SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEE
T ss_pred ----eECCCCCEEEEec-CCCEEEEECC----C----------CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeE
Confidence 1233555554332 3334555542 1 1222222221 234567778999999999998899
Q ss_pred EEEeCCCCccCCCCeeEEEec---CCceecCCceEEcCCCcEEEEec
Q psy11781 708 GCWNTKTKVYLPQTQDIVQTS---RDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 708 ~~wn~~~~~~~~~n~~iV~~~---d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
.++|++|++. +-.+... ..+|.||.++.+.++|.+||.+.
T Consensus 189 ~~~d~~tG~~----~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 189 VQLNLESNRI----VRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEECTTTCCE----EEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEeCcCCcE----EEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999985432 2223221 22689999999999999999984
No 94
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.45 E-value=0.0059 Score=66.73 Aligned_cols=74 Identities=14% Similarity=0.111 Sum_probs=55.3
Q ss_pred EEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCC
Q psy11781 474 SVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 553 (1228)
Q Consensus 474 ~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~ 553 (1228)
.....+++||...+. .+|.+||+.++++++++.++.. .....++++. ++.++|++....
T Consensus 6 ~~~~~~~~~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s~----dg~~~~v~~~~~ 64 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYP------------NNLHVVDVASDTVYKSCVMPDK-----FGPGTAMMAP----DNRTAYVLNNHY 64 (349)
T ss_dssp CCCTTCEEEEEEETT------------TEEEEEETTTTEEEEEEECSSC-----CSSCEEEECT----TSSEEEEEETTT
T ss_pred cccCCCEEEEEeCCC------------CeEEEEECCCCcEEEEEecCCC-----CCCceeEECC----CCCEEEEEeCCC
Confidence 345567888877653 3599999999999999888641 1245666652 456899999888
Q ss_pred CeEEEEEcCCCeEEE
Q psy11781 554 YGLIVYDFFKNTSYR 568 (1228)
Q Consensus 554 ~gLIVyDl~~g~swR 568 (1228)
..|.+||+.+++.-+
T Consensus 65 ~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CcEEEEeCCCCcEEE
Confidence 899999999987654
No 95
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.41 E-value=0.012 Score=63.92 Aligned_cols=201 Identities=13% Similarity=0.172 Sum_probs=113.1
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCcCccCCCEEEEEECC--CCcEEEEEECCCcccccCCCceeEEEEeecCCCCeE
Q psy11781 469 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK--TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 545 (1228)
Q Consensus 469 sV~~v~iD~~gR-LWVLDtG~~~~~~~~~~~~~PKLvvfDL~--td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~ 545 (1228)
.+..+.++++|+ |++.+.+. .+|.+||+. ++++...-.++. . .....++++ .++.+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~s----~dg~~ 97 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE------------FRVLAYRIAPDDGALTFAAESAL----P-GSLTHISTD----HQGQF 97 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT------------TEEEEEEECTTTCCEEEEEEEEC----S-SCCSEEEEC----TTSSE
T ss_pred CCceEEECCCCCEEEEeecCC------------CeEEEEEecCCCCceeecccccc----C-CCCcEEEEc----CCCCE
Confidence 355577788876 88887752 247787776 666443323321 1 145667776 25678
Q ss_pred EEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccccccccccc
Q psy11781 546 AYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYN 625 (1228)
Q Consensus 546 aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~ 625 (1228)
+|+++.....|.+||+.+++..+.... +.+ ...+.++++
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~------------~~~-----~~~~~~~~~------------------------ 136 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDV------------VEG-----LDGCHSANI------------------------ 136 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEE------------ECC-----CTTBCCCEE------------------------
T ss_pred EEEEecCCCeEEEEECCCCcccccccc------------ccC-----CCCceEEEE------------------------
Confidence 999998888899999965544433210 100 112333444
Q ss_pred CccccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCC
Q psy11781 626 GTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTK 704 (1228)
Q Consensus 626 ~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~ 704 (1228)
+++++.||........++.++.+. +..+ ... .........| ....+++++.+|. ||++....
T Consensus 137 --------s~dg~~l~~~~~~~~~v~~~d~~~--~~~~----~~~-~~~~~~~~~~--~~~~~~~~~pdg~~l~~~~~~~ 199 (343)
T 1ri6_A 137 --------SPDNRTLWVPALKQDRICLFTVSD--DGHL----VAQ-DPAEVTTVEG--AGPRHMVFHPNEQYAYCVNELN 199 (343)
T ss_dssp --------CTTSSEEEEEEGGGTEEEEEEECT--TSCE----EEE-EEEEEECSTT--CCEEEEEECTTSSEEEEEETTT
T ss_pred --------CCCCCEEEEecCCCCEEEEEEecC--CCce----eee-cccccccCCC--CCcceEEECCCCCEEEEEeCCC
Confidence 447888988875555565554311 1111 000 0001111112 2356789998886 88888888
Q ss_pred CeEEEEeCCC--CccCCCCeeEEEecC---CceecCCceEEcCCCc-EEEEe
Q psy11781 705 HSVGCWNTKT--KVYLPQTQDIVQTSR---DILNFPNDLKIDPNDN-IWILS 750 (1228)
Q Consensus 705 ~aI~~wn~~~--~~~~~~n~~iV~~~d---~~L~wPd~l~Id~dg~-LyVls 750 (1228)
+.|..|+.+. +.+. ....+..-. ....+|.+++++++|. ||+..
T Consensus 200 ~~i~~~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~ 249 (343)
T 1ri6_A 200 SSVDVWELKDPHGNIE--CVQTLDMMPENFSDTRWAADIHITPDGRHLYACD 249 (343)
T ss_dssp TEEEEEESSCTTSCCE--EEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEE
T ss_pred CEEEEEEecCCCCcEE--EEeeccccCccccccCCccceEECCCCCEEEEEe
Confidence 9999999851 2221 112222111 1134666799999884 66544
No 96
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.40 E-value=0.019 Score=65.15 Aligned_cols=225 Identities=14% Similarity=0.148 Sum_probs=127.0
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEE
Q psy11781 918 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 918 vSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
..|..+....++++|+...... +|.+||+++++.++++... ......+.++. ++.++|
T Consensus 170 ~~v~~~~~~~~~~~~~s~~~d~------------~v~~~d~~~~~~~~~~~~~------~~~~~~~~~~~----~~~~l~ 227 (433)
T 3bws_A 170 GFVETISIPEHNELWVSQMQAN------------AVHVFDLKTLAYKATVDLT------GKWSKILLYDP----IRDLVY 227 (433)
T ss_dssp CEEEEEEEGGGTEEEEEEGGGT------------EEEEEETTTCCEEEEEECS------SSSEEEEEEET----TTTEEE
T ss_pred CceeEEEEcCCCEEEEEECCCC------------EEEEEECCCceEEEEEcCC------CCCeeEEEEcC----CCCEEE
Confidence 4567778888999999876432 7999999999999877632 23455666652 467899
Q ss_pred EEcCCCCeEEEEECCCCeEEEeecC-----CcCcCCCcceeEEcCEEEE---eeCCccceecCccccccccCCCcccccc
Q psy11781 998 VNDVFRYGLIVYDFFKNTSYRLTHP-----YMYPEPTQSTYILDNLKFR---WVDGIFGMAISPELSGKYKRHPYEYYHY 1069 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~swRv~h~-----s~~pdP~~~~~~i~G~~f~---~~dGi~GiaLsp~~~~~~~~~p~~~~~~ 1069 (1228)
+++...+.|.+||+++++..+.... .+...|+...+.+.+..-. -.||. |.+-..... ......
T Consensus 228 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~--i~~~d~~~~----~~~~~~-- 299 (433)
T 3bws_A 228 CSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGR--LGIYSMDKE----KLIDTI-- 299 (433)
T ss_dssp EEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEE--EEEEETTTT----EEEEEE--
T ss_pred EEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCe--EEEEECCCC----cEEeec--
Confidence 9998888999999999887654421 1111121111111110000 00000 000000000 000000
Q ss_pred ccccccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCc-E
Q psy11781 1070 NVHHYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-M 1147 (1228)
Q Consensus 1070 ~~~~~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~-L 1147 (1228)
.+. .... ++.+|+++.||+.......++..+.+ ... .++.+... ....+++++.+|. |
T Consensus 300 --~~~--~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~---~~~----------~~~~~~~~---~~~~~~~~s~dg~~l 359 (433)
T 3bws_A 300 --GPP--GNKRHIVSGNTENKIYVSDMCCSKIEVYDLK---EKK----------VQKSIPVF---DKPNTIALSPDGKYL 359 (433)
T ss_dssp --EEE--ECEEEEEECSSTTEEEEEETTTTEEEEEETT---TTE----------EEEEEECS---SSEEEEEECTTSSEE
T ss_pred --cCC--CCcceEEECCCCCEEEEEecCCCEEEEEECC---CCc----------EEEEecCC---CCCCeEEEcCCCCEE
Confidence 000 1122 78899999999987777767776642 111 11222211 2356888998885 7
Q ss_pred EEEecCC--------------CeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEe
Q psy11781 1148 FYNLVTK--------------HSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 1200 (1228)
Q Consensus 1148 Y~t~~~~--------------~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvls 1200 (1228)
|++.... ..|..||..+++. ...+.. -..|.+++++++|...+++
T Consensus 360 ~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~----~~~~~~----~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 360 YVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTV----KEFWEA----GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEE----EEEEEC----SSSEEEEEECTTSCEEEEE
T ss_pred EEEecCCCccccccccccccceEEEEEECCCCcE----EEEecC----CCCCceEEEcCCCCEEEEE
Confidence 7776654 3899999973321 122221 2367889999988644443
No 97
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.39 E-value=0.0072 Score=66.54 Aligned_cols=189 Identities=10% Similarity=0.012 Sum_probs=116.2
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
+..+.++++|++++ ++. ..|..||. +++++.++..+.. ..+.+..+. .++..+|+
T Consensus 39 ~~~~~~~pdG~ilv--s~~------------~~V~~~d~-~G~~~W~~~~~~~-----~~~~~~~~~-----~dG~~lv~ 93 (276)
T 3no2_A 39 CNSVAATKAGEILF--SYS------------KGAKMITR-DGRELWNIAAPAG-----CEMQTARIL-----PDGNALVA 93 (276)
T ss_dssp CCEEEECTTSCEEE--ECB------------SEEEEECT-TSCEEEEEECCTT-----CEEEEEEEC-----TTSCEEEE
T ss_pred CcCeEECCCCCEEE--eCC------------CCEEEECC-CCCEEEEEcCCCC-----ccccccEEC-----CCCCEEEE
Confidence 45667888999999 221 15999999 9999999998632 223344443 35778889
Q ss_pred cCC-CCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 1000 DVF-RYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 1000 D~~-~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
+.+ ...|+.+|......|++.-. + ++.+ ...+.
T Consensus 94 ~~~~~~~v~~vd~~Gk~l~~~~~~--------------~-------~~~~-~~~~~------------------------ 127 (276)
T 3no2_A 94 WCGHPSTILEVNMKGEVLSKTEFE--------------T-------GIER-PHAQF------------------------ 127 (276)
T ss_dssp EESTTEEEEEECTTSCEEEEEEEC--------------C-------SCSS-GGGSC------------------------
T ss_pred ecCCCCEEEEEeCCCCEEEEEecc--------------C-------CCCc-ccccc------------------------
Confidence 887 77888899866656765211 0 0000 00000
Q ss_pred ccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEE
Q psy11781 1079 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVG 1158 (1228)
Q Consensus 1079 ~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~ 1158 (1228)
-.+..+++++.|+-. ....+++.++.+ .+.+-.++.. +..-+...+.+|+++++....+.|.
T Consensus 128 ~~v~~~~~G~~lv~~-~~~~~v~~~d~~--------------G~~~w~~~~~---~~~~~~~~~~~g~~~v~~~~~~~v~ 189 (276)
T 3no2_A 128 RQINKNKKGNYLVPL-FATSEVREIAPN--------------GQLLNSVKLS---GTPFSSAFLDNGDCLVACGDAHCFV 189 (276)
T ss_dssp SCCEECTTSCEEEEE-TTTTEEEEECTT--------------SCEEEEEECS---SCCCEEEECTTSCEEEECBTTSEEE
T ss_pred cCceECCCCCEEEEe-cCCCEEEEECCC--------------CCEEEEEECC---CCccceeEcCCCCEEEEeCCCCeEE
Confidence 002334466655433 333446555421 1112222221 1244577788999999999988999
Q ss_pred EEeCCCCccccCCeeEEEec---CCceecCCceEEeCCCcEEEEeC
Q psy11781 1159 CWNTKTKVYLPQTQDIVQTS---RDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1159 ~wn~~~~~~~~~n~~~v~~~---~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
++|++|++.. -.+... ..+|.||.++.+.++|++||.+.
T Consensus 190 ~~d~~tG~~~----w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 190 QLNLESNRIV----RRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EECTTTCCEE----EEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEeCcCCcEE----EEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999865532 222221 22688999999999999999984
No 98
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=97.39 E-value=0.33 Score=60.51 Aligned_cols=257 Identities=11% Similarity=0.080 Sum_probs=129.0
Q ss_pred cceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCCCC
Q psy11781 412 LGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTN 490 (1228)
Q Consensus 412 ~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG~~~ 490 (1228)
..+..+ +|+|++.. . .| |..++.+ ....+.|+.-. . .....-..|+.+..|..|+|||-=.|. +
T Consensus 376 ~~i~~d~~g~lWigt-~--~G----L~~~~~~----~~~~~~~~~~~--~-~~~~~~~~v~~i~~d~~g~lWigT~~~-G 440 (758)
T 3ott_A 376 RHIYEDKEQQLWIAT-D--GS----INRYDYA----TRQFIHYNIVD--N-TGTYNTNWTYYIFEDTAGQLWISTCLG-G 440 (758)
T ss_dssp EEEEECTTSCEEEEE-T--TE----EEEEETT----TTEEEEEEEEC--C-C--CBSSSEEEEEECTTSEEEEEESSS-C
T ss_pred EEEEECCCCCEEEEe-C--Cc----HhhcCcC----CCcEEEeecCC--C-cCCCCCceEEEEEEcCCCCEEEEECCC-c
Confidence 344443 68999986 2 23 6667643 13455554210 0 000012357888999999999964321 1
Q ss_pred cccCcCccCCCEEEEEECCC------CcEE--EEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcC
Q psy11781 491 ILSSIQQLCPPKIMVFDLKT------NTLI--RKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFF 562 (1228)
Q Consensus 491 ~~~~~~~~~~PKLvvfDL~t------d~vi--~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~ 562 (1228)
|..||.++ .+.. +.|..+..+ +...+..|..| .++.++|.-....||..||.+
T Consensus 441 ------------l~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~i~~i~~d-----~~g~lWi~~~t~~Gl~~~d~~ 501 (758)
T 3ott_A 441 ------------IFVVDKHKLMQSTSGQYIAEQNYSVHNGL--SGMFINQIIPD-----NEGNVWVLLYNNKGIDKINPR 501 (758)
T ss_dssp ------------EEEEEHHHHHHCCSSEEECSEEECGGGTC--SCSCEEEEEEC-----TTSCEEEEETTCSSEEEEETT
T ss_pred ------------eEEEccccccccCCcceeccccccccccc--ccceeeeEEEc-----CCCCEEEEccCCCCcEEEeCC
Confidence 77888653 1222 233322211 22345667776 578899943344799999999
Q ss_pred CCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEE
Q psy11781 563 KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF 642 (1228)
Q Consensus 563 ~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf 642 (1228)
+++..++..... .... .+..|..+ .+ ..|++
T Consensus 502 ~~~~~~~~~~~~-----~~~~-----------~~~~i~~d--------------------------------~~-g~lWi 532 (758)
T 3ott_A 502 TREVTKLFADEL-----TGEK-----------SPNYLLCD--------------------------------ED-GLLWV 532 (758)
T ss_dssp TTEEEEECTTTS-----CGGG-----------CEEEEEEC--------------------------------TT-SCEEE
T ss_pred CCceEEecCCCc-----CCCc-----------ccceEEEC--------------------------------CC-CCEEE
Confidence 987766532110 0000 01122221 12 34677
Q ss_pred eeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCe
Q psy11781 643 HSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQ 722 (1228)
Q Consensus 643 ~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~ 722 (1228)
+.-. -++++...- ..+ ..+..-| .+ .....++..| +|+|+++. .+.|.|+|+.+..+. +.
T Consensus 533 gt~~--Gl~~~~~~~---~~~--------~~~~~~g-l~-~~~i~~i~~~-~g~lWi~t--~~Gl~~~~~~~~~~~--~~ 592 (758)
T 3ott_A 533 GFHG--GVMRINPKD---ESQ--------QSISFGS-FS-NNEILSMTCV-KNSIWVST--TNGLWIIDRKTMDAR--QQ 592 (758)
T ss_dssp EETT--EEEEECC-----CCC--------CBCCCCC-----CCEEEEEEE-TTEEEEEE--SSCEEEEETTTCCEE--EC
T ss_pred EecC--ceEEEecCC---Cce--------EEecccC-CC-ccceEEEEEC-CCCEEEEC--CCCeEEEcCCCceeE--Ee
Confidence 6543 377665321 111 0010001 10 1123445545 89999997 568999999833221 11
Q ss_pred eEEEecCCceecCCceEEcCCCcEEEEe-cCccccccCCC--CCccccEEEEEEecc
Q psy11781 723 DIVQTSRDILNFPNDLKIDPNDNIWILS-NKLHQYLYGFL--DFNVYNYRILVANSN 776 (1228)
Q Consensus 723 ~iV~~~d~~L~wPd~l~Id~dg~LyVls-nrl~~~~~~~~--d~~e~nfrI~r~~v~ 776 (1228)
. ..+ ..+...+..+.+|.||+-+ +.|-.|....+ +...++..|-.+.+.
T Consensus 593 ~---~~~--~~~~~~~~~~~~G~l~fG~~~Gl~~f~p~~~~~~~~~~~v~it~~~v~ 644 (758)
T 3ott_A 593 N---MTN--KRFTSLLFDPKEDCVYLGGADGFGISHSNLEATYQPERPILLTALYIN 644 (758)
T ss_dssp -----CC--CCCSEEEEETTTTEEEEECBSEEEEEEC---CCCCCCCCCEEEEEEET
T ss_pred c---CCC--CceeeeEEECCCCcEEEecCCceEEEChhhcccccCCCCEEEEEEEEC
Confidence 1 111 2343334445799999987 34444433332 334456667676663
No 99
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=97.38 E-value=0.021 Score=62.04 Aligned_cols=244 Identities=10% Similarity=0.056 Sum_probs=121.4
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCccccccccCCCEEEEEECC--CCcEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 919 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK--TNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 919 SV~~v~iD~~gr-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~--td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
.+..+.++.+|+ |++.+.+. .+|.+||+. ++++...-.++.. .....++++. ++.+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~~------------~~v~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~s~----dg~~ 97 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRPE------------FRVLAYRIAPDDGALTFAAESALP-----GSLTHISTDH----QGQF 97 (343)
T ss_dssp CCCCEEECTTSSEEEEEETTT------------TEEEEEEECTTTCCEEEEEEEECS-----SCCSEEEECT----TSSE
T ss_pred CCceEEECCCCCEEEEeecCC------------CeEEEEEecCCCCceeeccccccC-----CCCcEEEEcC----CCCE
Confidence 345577788876 88887753 167888776 6765433333221 1345666652 4678
Q ss_pred EEEEcCCCCeEEEEECCCCeEEEeecC-CcCcCCCcceeEEcCEEEEee---CCccceecCccccccccCCCcccc--cc
Q psy11781 996 AYVNDVFRYGLIVYDFFKNTSYRLTHP-YMYPEPTQSTYILDNLKFRWV---DGIFGMAISPELSGKYKRHPYEYY--HY 1069 (1228)
Q Consensus 996 aYItD~~~~gLIVydl~~g~swRv~h~-s~~pdP~~~~~~i~G~~f~~~---dGi~GiaLsp~~~~~~~~~p~~~~--~~ 1069 (1228)
+|+++...+.|.+||+.+++..+.... .....+....+.-+|..+... +|. +.+...... ....... ..
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~--v~~~d~~~~---~~~~~~~~~~~ 172 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDR--ICLFTVSDD---GHLVAQDPAEV 172 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTE--EEEEEECTT---SCEEEEEEEEE
T ss_pred EEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCE--EEEEEecCC---Cceeeeccccc
Confidence 999998888899999965544433210 000111111122223222111 111 111100000 0000000 00
Q ss_pred ccccccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccc-cCCCCcccEEEcCCC-c
Q psy11781 1070 NVHHYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSR-FRNTQASASAINSNG-V 1146 (1228)
Q Consensus 1070 ~~~~~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~r-g~~sqs~g~~~D~~G-~ 1146 (1228)
. ...+.+.. ++++|++++||.....+..+...+...- ...+ .....+..+... +......+++++.+| .
T Consensus 173 ~--~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~-----~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 173 T--TVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNI-----ECVQTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp E--CSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCC-----EEEEEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred c--cCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcE-----EEEeeccccCccccccCCccceEECCCCCE
Confidence 0 00112233 7899999999998866666666653210 0110 001111111110 001234468999888 5
Q ss_pred EEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEe
Q psy11781 1147 MFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILS 1200 (1228)
Q Consensus 1147 LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvls 1200 (1228)
||++.-..+.|..|+.+ .. ......+..-... ..|.+++++++|. ||+..
T Consensus 245 l~v~~~~~~~i~v~d~~-~~--~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 245 LYACDRTASLITVFSVS-ED--GSVLSKEGFQPTE-TQPRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EEEEETTTTEEEEEEEC-TT--SCCEEEEEEEECS-SSCCCEEECTTSSEEEEEC
T ss_pred EEEEecCCCEEEEEEEc-CC--CCceEEeeeecCC-CccceEEECCCCCEEEEec
Confidence 77788788999999986 21 0112223221111 2388999999986 56554
No 100
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=97.37 E-value=0.014 Score=65.47 Aligned_cols=182 Identities=14% Similarity=0.220 Sum_probs=116.0
Q ss_pred EEEEEEeCCCc-EEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 920 VFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 920 V~~v~iD~~gr-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
+..+...++|+ |++...+. -+|.+||+.++++++++..+. ....+++.. ++.++|+
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d------------~~i~v~d~~~~~~~~~~~~~~-------~v~~~~~sp----dg~~l~~ 90 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHS------------NDVSIIDTATNNVIATVPAGS-------SPQGVAVSP----DGKQVYV 90 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGG------------TEEEEEETTTTEEEEEEECSS-------SEEEEEECT----TSSEEEE
T ss_pred cceEEECCCCCEEEEECCCC------------CeEEEEECCCCeEEEEEECCC-------CccceEECC----CCCEEEE
Confidence 56788888886 55655332 179999999999999887754 345566642 4678999
Q ss_pred EcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcc
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 1078 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~ 1078 (1228)
+......|.|||+++++..+.... + .++.+++
T Consensus 91 ~~~~~~~v~v~d~~~~~~~~~~~~-------------~-------~~~~~~~---------------------------- 122 (391)
T 1l0q_A 91 TNMASSTLSVIDTTSNTVAGTVKT-------------G-------KSPLGLA---------------------------- 122 (391)
T ss_dssp EETTTTEEEEEETTTTEEEEEEEC-------------S-------SSEEEEE----------------------------
T ss_pred EECCCCEEEEEECCCCeEEEEEeC-------------C-------CCcceEE----------------------------
Confidence 998888999999999876554210 0 1122333
Q ss_pred ccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCC-cEEEEecCCCeE
Q psy11781 1079 VDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNG-VMFYNLVTKHSV 1157 (1228)
Q Consensus 1079 ~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G-~LY~t~~~~~aI 1157 (1228)
++|+++.||+..-....++..+.+ ... . +..+.. + ....+++++.+| .||++.-..+.|
T Consensus 123 ----~s~dg~~l~~~~~~~~~v~~~d~~---~~~-------~---~~~~~~-~--~~~~~~~~~~dg~~l~~~~~~~~~v 182 (391)
T 1l0q_A 123 ----LSPDGKKLYVTNNGDKTVSVINTV---TKA-------V---INTVSV-G--RSPKGIAVTPDGTKVYVANFDSMSI 182 (391)
T ss_dssp ----ECTTSSEEEEEETTTTEEEEEETT---TTE-------E---EEEEEC-C--SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred ----ECCCCCEEEEEeCCCCEEEEEECC---CCc-------E---EEEEec-C--CCcceEEECCCCCEEEEEeCCCCEE
Confidence 445788888887766667766532 111 1 111111 1 124678888777 467788888999
Q ss_pred EEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEe
Q psy11781 1158 GCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILS 1200 (1228)
Q Consensus 1158 ~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvls 1200 (1228)
..||..++.. ...+.. -..+.++++.++|. ||+.+
T Consensus 183 ~~~d~~~~~~----~~~~~~----~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 183 SVIDTVTNSV----IDTVKV----EAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEETTTTEE----EEEEEC----SSEEEEEEECTTSSEEEEEE
T ss_pred EEEECCCCeE----EEEEec----CCCccceEECCCCCEEEEEe
Confidence 9999983321 122221 12566778887774 56555
No 101
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.35 E-value=0.045 Score=62.98 Aligned_cols=168 Identities=12% Similarity=0.048 Sum_probs=95.6
Q ss_pred ceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcc
Q psy11781 530 FSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKY 609 (1228)
Q Consensus 530 l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~ 609 (1228)
--.|+++ .++.+||++...+.|.+++..+++.-.+..- |+ ....| ..|.+|||++|.-.
T Consensus 34 P~~ia~~-----pdG~llVter~~G~I~~v~~~~g~~~~v~~~---~~-----v~~~g-----~~GllGia~~Pdf~--- 92 (347)
T 3das_A 34 PWGLAPL-----PGGDLLVSSRDEATITRVDAKTGRKTELGEV---PG-----VSPSG-----EGGLLGIALSPDYA--- 92 (347)
T ss_dssp EEEEEEC-----TTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT-----CCCBT-----TBSEEEEEECTTHH---
T ss_pred ceEEEEc-----CCCcEEEEEecCCEEEEEECCCCcEeeeccc---Cc-----eeecC-----CCCceeeEeccccc---
Confidence 3456665 4566888887566777777666654333210 00 00112 35788999988411
Q ss_pred cCCCccccccccccccCccccccccCCCceEEE--eeCCCCceEEEechhhc-C-CCCCCCccccccceEeecccccccc
Q psy11781 610 KRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYF--HSLSSNRHYYVSTTDLR-N-SSRYVNSSDIDEYFHYLGSRFRNTQ 685 (1228)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf--~~lss~~ly~V~T~~Lr-~-~~~~~~~~~~~~~v~~lG~~g~~~q 685 (1228)
.+++||+ +..+..++.+...+--. + ..+ .. ...-+..+.. +..-.
T Consensus 93 --------------------------~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~--~~--~~~i~~~~p~-~~~H~ 141 (347)
T 3das_A 93 --------------------------SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQL--GA--PDTVFRGIPK-GVIHN 141 (347)
T ss_dssp --------------------------HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCB--CC--CEEEEEEECC-CSSCC
T ss_pred --------------------------cCCEEEEEEecCCCCEEEEEEeCCCCcccccC--CC--cEEEEEcCCC-CCCcc
Confidence 1345554 44555667777532100 0 111 11 1111222221 11123
Q ss_pred ccceEEccCCcEEEEcC-------------CCCeEEEEeCCCCccCCC----CeeEEEecCCceecCCceEEcCCCcEEE
Q psy11781 686 ASASAINSNGVMFYNLV-------------TKHSVGCWNTKTKVYLPQ----TQDIVQTSRDILNFPNDLKIDPNDNIWI 748 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~-------------~~~aI~~wn~~~~~~~~~----n~~iV~~~d~~L~wPd~l~Id~dg~LyV 748 (1228)
...++++.+|.||++.- ...+|.+.+++ +...+. ...+.+. .+.-|.+|+++++|.||+
T Consensus 142 g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~---G~RNp~Gla~dp~G~L~~ 217 (347)
T 3das_A 142 GGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSY---GHRNVQGLAWDDKQRLFA 217 (347)
T ss_dssp CCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEB---CCSBCCEEEECTTCCEEE
T ss_pred CccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEee---CCCCcceEEECCCCCEEE
Confidence 56799999999999953 36899999998 532111 1234442 456799999999999999
Q ss_pred EecCc
Q psy11781 749 LSNKL 753 (1228)
Q Consensus 749 lsnrl 753 (1228)
..+.-
T Consensus 218 ~d~g~ 222 (347)
T 3das_A 218 SEFGQ 222 (347)
T ss_dssp EECCS
T ss_pred EecCC
Confidence 98643
No 102
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.34 E-value=0.0037 Score=73.86 Aligned_cols=284 Identities=12% Similarity=0.014 Sum_probs=150.4
Q ss_pred eCCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCC-cEEEEeCCCCCcccCc
Q psy11781 417 WRSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCD-RLWIMDTGVTNILSSI 495 (1228)
Q Consensus 417 ~~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~g-RLWVLDtG~~~~~~~~ 495 (1228)
+..|+||+-..+.... -+|..|+.... -.+.-.|- +. .. ++.++++| +|||.+++.....
T Consensus 83 ~~~~vyV~n~~~~~~~-~~VsVID~~t~---~vv~~I~v----------G~-~P-gia~SpDgk~lyVan~~~~~~~--- 143 (426)
T 3c75_H 83 DARRVYIQDPAHFAAI-TQQFVIDGSTG---RILGMTDG----------GF-LP-HPVAAEDGSFFAQASTVFERIA--- 143 (426)
T ss_dssp CTTEEEEEECTTTCSS-EEEEEEETTTT---EEEEEEEE----------CS-SC-EEEECTTSSCEEEEEEEEEETT---
T ss_pred CCCEEEEECCCcCCCC-CeEEEEECCCC---EEEEEEEC----------CC-CC-ceEECCCCCEEEEEeccccccc---
Confidence 4689999987653222 57888886421 11211121 11 24 78888877 5999987421000
Q ss_pred CccCCCEEEEEECCCCcEEEEEECCC-cccccCCCceeEEEEeecCCCCeEEEEecCC-CCeEEEEEcCCCeEEEEcCCC
Q psy11781 496 QQLCPPKIMVFDLKTNTLIRKYILPT-AQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYRLTHPY 573 (1228)
Q Consensus 496 ~~~~~PKLvvfDL~td~vi~~y~~p~-~v~~~~S~l~di~VD~~~~c~~~~aYItDs~-~~gLIVyDl~~g~swRv~~~s 573 (1228)
.-.....|.+||+.|.++++++.++. .-...+.....++++. ++.++|+++.. ...|.|+|+++++.-+-..
T Consensus 144 ~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~sp----DGk~lyV~n~~~~~~VsVID~~t~kvv~~I~-- 217 (426)
T 3c75_H 144 RGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTP----DNKNLLFYQFSPAPAVGVVDLEGKTFDRMLD-- 217 (426)
T ss_dssp EEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECT----TSSEEEEEECSSSCEEEEEETTTTEEEEEEE--
T ss_pred cCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcC----CCCEEEEEecCCCCeEEEEECCCCeEEEEEE--
Confidence 00012469999999999999999962 1111123456788872 57799999875 6789999999988754321
Q ss_pred CCcCCCCcceEEcC-eEe--eecCCc-ceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCc
Q psy11781 574 MYPEPTQSTYILDN-LKF--RWVDGI-FGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNR 649 (1228)
Q Consensus 574 ~~pdP~~~~~~i~G-~~f--~~~dGi-~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ 649 (1228)
-|....+.-.| ..| ...||. .-+.+ ...... .+.. .+++....+ +...++++++++.+||.+..+ +
T Consensus 218 ---v~g~~~~~p~g~~~~v~~~~dG~~~~V~~-~~~~v~-~~~~-~~~~v~~~p---~~~~~~~~~dg~~~~~~s~~g-~ 287 (426)
T 3c75_H 218 ---VPDCYHIFPASPTVFYMNCRDGSLARVDF-ADGETK-VTNT-EVFHTEDEL---LINHPAFSLRSGRLVWPTYTG-K 287 (426)
T ss_dssp ---CCSEEEEEEEETTEEEEEETTSSEEEEEC-CTTCCE-EEEC-CCCSCTTSC---BCSCCEECTTTCEEEEEBTTS-E
T ss_pred ---cCCceeeccCCCcEEEEEcCCCCEEEEEC-CCCcEE-EEee-eeeccCCCc---eeeEeeecCCCCEEEEEeCCC-c
Confidence 01000000001 000 012221 11222 110000 0000 001100000 001134588899999999865 6
Q ss_pred eEEEechhhcCCCCCCCccccccceE-------eeccccccccccceEEccC-CcEEEEcCC---------CCeEEEEeC
Q psy11781 650 HYYVSTTDLRNSSRYVNSSDIDEYFH-------YLGSRFRNTQASASAINSN-GVMFYNLVT---------KHSVGCWNT 712 (1228)
Q Consensus 650 ly~V~T~~Lr~~~~~~~~~~~~~~v~-------~lG~~g~~~qs~G~a~D~~-G~LY~t~~~---------~~aI~~wn~ 712 (1228)
+|.++..- ... .....++ ..|.++ .....++++++ +.||++.-. .+.|..+|+
T Consensus 288 V~ViD~~~---~~~-----~v~~~~~~~~~~~i~~g~~p--~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 288 IFQADLTA---EGA-----TFRAPIEALTEAERADDWRP--GGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp EEEEEECS---SCE-----EECCCEESSCTTTGGGTEEE--CSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred EEEEeccC---Cce-----EEeeeeeecccccccccccc--CCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 88887521 110 0011111 122222 11234888855 678998642 357999999
Q ss_pred CCCccCCCCeeEEEecCCceecCCceEEcCCCc-EEEEecCc
Q psy11781 713 KTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNKL 753 (1228)
Q Consensus 713 ~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~-LyVlsnrl 753 (1228)
.+.+ -+..|.. =..|.++.+++||. +++++|..
T Consensus 358 ~T~k----vv~~I~v----g~~P~gia~spDg~~~lyv~n~~ 391 (426)
T 3c75_H 358 ETGE----RINKIEL----GHEIDSINVSQDAEPLLYALSAG 391 (426)
T ss_dssp TTCC----EEEEEEE----EEEECEEEECCSSSCEEEEEETT
T ss_pred CCCe----EEEEEEC----CCCcCeEEEccCCCEEEEEEcCC
Confidence 7321 1222211 12599999999998 88888764
No 103
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.32 E-value=0.014 Score=66.78 Aligned_cols=83 Identities=5% Similarity=0.007 Sum_probs=54.2
Q ss_pred CcceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 465 NSLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 465 ~~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
++|..+.+|.++++|||||.|.. + +|.++|. +++ .....+| -.......+.+|+++... ..++
T Consensus 26 ~~l~~P~~ia~~pdG~l~V~e~~--g-----------~I~~~d~-~G~-~~~~~~~-v~~~g~~g~~gia~~pdf-~~~g 88 (354)
T 3a9g_A 26 SDLEVPWSIAPLGGGRYLVTERP--G-----------RLVLISP-SGK-KLVASFD-VANVGEAGLLGLALHPEF-PKKS 88 (354)
T ss_dssp CSCSCEEEEEEEETTEEEEEETT--T-----------EEEEECS-SCE-EEEEECC-CCCSTTCSEEEEEECTTT-TTSC
T ss_pred CCCCCCeEEEEcCCCeEEEEeCC--C-----------EEEEEeC-CCc-eEeeccc-eeecCCCceeeEEeCCCC-CcCC
Confidence 46888999999999999999975 1 4888873 454 2222454 111233568899998310 1258
Q ss_pred EEEEecCC---C----CeEEEEEcCCC
Q psy11781 545 FAYVNDVF---R----YGLIVYDFFKN 564 (1228)
Q Consensus 545 ~aYItDs~---~----~gLIVyDl~~g 564 (1228)
.+|++++. . ..|..|++..+
T Consensus 89 ~lyv~~~~~~~~~~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 89 WVYLYASYFAEGGHIRNRVIRGRLDGS 115 (354)
T ss_dssp EEEEEEEEECGGGCEEEEEEEEEECSS
T ss_pred EEEEEEeccCCCCCcceEEEEEEECCC
Confidence 99999874 2 45666666543
No 104
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=97.29 E-value=0.028 Score=63.80 Aligned_cols=269 Identities=14% Similarity=0.169 Sum_probs=143.9
Q ss_pred ccceEEe-CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCcEEEEeCCCC
Q psy11781 411 PLGIGIW-RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVT 489 (1228)
Q Consensus 411 P~gv~v~-~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gRLWVLDtG~~ 489 (1228)
|..+++. +++++++--+ +| ++...+.... ..++-.+.-.+ ......|..+...+++++|+.....
T Consensus 125 ~~~~~~s~~~~~~~~~~~--~~---~i~~~d~~~g---~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~s~~~d- 190 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLE--DE---GMDVLDINSG---QTVRLSPPEKY-----KKKLGFVETISIPEHNELWVSQMQA- 190 (433)
T ss_dssp BCCCEESSSSEEEEEBTT--SS---SEEEEETTTC---CEEEECCCHHH-----HTTCCEEEEEEEGGGTEEEEEEGGG-
T ss_pred ceEEEEeCCCeEEEEeCC--CC---eEEEEECCCC---eEeeecCcccc-----cccCCceeEEEEcCCCEEEEEECCC-
Confidence 4566665 5778877633 22 3555554321 11121111011 1223467777888899999987642
Q ss_pred CcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEE
Q psy11781 490 NILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 490 ~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv 569 (1228)
.+|.+||+++++.++++.. .......++++. ++.++|+++.....|.+||+.+++.-+.
T Consensus 191 -----------~~v~~~d~~~~~~~~~~~~------~~~~~~~~~~~~----~~~~l~~~~~~~~~i~~~d~~~~~~~~~ 249 (433)
T 3bws_A 191 -----------NAVHVFDLKTLAYKATVDL------TGKWSKILLYDP----IRDLVYCSNWISEDISVIDRKTKLEIRK 249 (433)
T ss_dssp -----------TEEEEEETTTCCEEEEEEC------SSSSEEEEEEET----TTTEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred -----------CEEEEEECCCceEEEEEcC------CCCCeeEEEEcC----CCCEEEEEecCCCcEEEEECCCCcEEEE
Confidence 3599999999999887763 223456777762 4678999998888999999999887655
Q ss_pred cCCC-----CCcCCCCcceEEcCeEeee---cCCcceeecCcccCCcccCCCccccccccccccCcccc-ccccCCCceE
Q psy11781 570 THPY-----MYPEPTQSTYILDNLKFRW---VDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRYM 640 (1228)
Q Consensus 570 ~~~s-----~~pdP~~~~~~i~G~~f~~---~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~is~d~r~L 640 (1228)
.... +...|....+.+.+..-.. .+|. |.+-.... .+......+. + ... ++.+++++.|
T Consensus 250 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~--i~~~d~~~-------~~~~~~~~~~--~-~~~~~~~~~~g~~l 317 (433)
T 3bws_A 250 TDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGR--LGIYSMDK-------EKLIDTIGPP--G-NKRHIVSGNTENKI 317 (433)
T ss_dssp CCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEE--EEEEETTT-------TEEEEEEEEE--E-CEEEEEECSSTTEE
T ss_pred ecCCCCceEEEEcCCCCEEEEEECCCCccccCCCe--EEEEECCC-------CcEEeeccCC--C-CcceEEECCCCCEE
Confidence 4221 1111111111111100000 0000 00000000 0000000000 0 122 6788999999
Q ss_pred EEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCC--------------C
Q psy11781 641 YFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTK--------------H 705 (1228)
Q Consensus 641 Yf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~--------------~ 705 (1228)
|+.......++..+.+ ... .++.+... ....+++++.+|. ||++.... +
T Consensus 318 ~~~~~~~~~v~v~d~~---~~~----------~~~~~~~~---~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg 381 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLK---EKK----------VQKSIPVF---DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLG 381 (433)
T ss_dssp EEEETTTTEEEEEETT---TTE----------EEEEEECS---SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCC
T ss_pred EEEecCCCEEEEEECC---CCc----------EEEEecCC---CCCCeEEEcCCCCEEEEEecCCCccccccccccccce
Confidence 9987666666666542 111 11222211 2356888988885 77776654 3
Q ss_pred eEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 706 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 706 aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
.|..||..++. -...+. . -..|.++++.++|...+++
T Consensus 382 ~v~~~d~~~~~----~~~~~~-~---~~~~~~~~~s~dg~~l~~~ 418 (433)
T 3bws_A 382 KVYVIDTTTDT----VKEFWE-A---GNQPTGLDVSPDNRYLVIS 418 (433)
T ss_dssp EEEEEETTTTE----EEEEEE-C---SSSEEEEEECTTSCEEEEE
T ss_pred EEEEEECCCCc----EEEEec-C---CCCCceEEEcCCCCEEEEE
Confidence 89999997222 122222 1 2357889999888644443
No 105
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.28 E-value=0.015 Score=64.78 Aligned_cols=166 Identities=16% Similarity=0.225 Sum_probs=98.1
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCccccccccCCCEEEEEECCCCc-------EE-----EEEECCCCcccCCCcceeeEE
Q psy11781 919 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT-------LI-----RKYILPTAQVFEGSLFSNIVT 985 (1228)
Q Consensus 919 SV~~v~iD~~gr-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~-------li-----r~y~~p~~~~~~~S~l~di~V 985 (1228)
.+..+.++++|+ |++.|.|.- +|.+||+..+. +. ....++. ++....+++
T Consensus 156 ~~~~~~~spdg~~l~~~~~~~~------------~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~~ 218 (361)
T 3scy_A 156 HLHCVRITPDGKYLLADDLGTD------------QIHKFNINPNANADNKEKFLTKGTPEAFKVAP-----GSGPRHLIF 218 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTT------------EEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-----TCCEEEEEE
T ss_pred cceEEEECCCCCEEEEEeCCCC------------EEEEEEEcCCCCcccccceeecccccceecCC-----CCCCeEEEE
Confidence 467789999997 999987653 57777766543 32 2334432 344556777
Q ss_pred EeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCcc
Q psy11781 986 EVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYE 1065 (1228)
Q Consensus 986 D~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~ 1065 (1228)
+. ++.++|+++.....|.|||+.+++...+..-...+. + ..+..
T Consensus 219 sp----dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~---------~-----~~~~~------------------ 262 (361)
T 3scy_A 219 NS----DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV---------N-----AQGSG------------------ 262 (361)
T ss_dssp CT----TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS---------C-----CCCEE------------------
T ss_pred cC----CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC---------C-----CCCcc------------------
Confidence 52 456999999888899999999875443321000000 0 00111
Q ss_pred ccccccccccCccccceecCCCceEEEEeCC-CC--ceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEc
Q psy11781 1066 YYHYNVHHYNGTNVDKTIRDDQRYMYFHSLS-SN--RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAIN 1142 (1228)
Q Consensus 1066 ~~~~~~~~~~~~~~di~ls~d~r~LYf~pls-s~--~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D 1142 (1228)
.|++|||+++||..... .. .+|.++.+ ...+ ..+..+.. + ....+++++
T Consensus 263 --------------~i~~spdg~~l~v~~~~~~~~i~v~~~~~~---~g~~--------~~~~~~~~-g--~~~~~~~~s 314 (361)
T 3scy_A 263 --------------DIHLSPDGKYLYASNRLKADGVAIFKVDET---NGTL--------TKVGYQLT-G--IHPRNFIIT 314 (361)
T ss_dssp --------------EEEECTTSSEEEEEECSSSCEEEEEEECTT---TCCE--------EEEEEEEC-S--SCCCEEEEC
T ss_pred --------------cEEECCCCCEEEEECCCCCCEEEEEEEcCC---CCcE--------EEeeEecC-C--CCCceEEEC
Confidence 25677799999987765 33 34444310 1110 11111211 2 246789999
Q ss_pred CCCc-EEEEecCCCeEEE--EeCCCC
Q psy11781 1143 SNGV-MFYNLVTKHSVGC--WNTKTK 1165 (1228)
Q Consensus 1143 ~~G~-LY~t~~~~~aI~~--wn~~~~ 1165 (1228)
++|. ||++....+.|.. ||+.++
T Consensus 315 pdg~~l~~~~~~~~~v~v~~~d~~~g 340 (361)
T 3scy_A 315 PNGKYLLVACRDTNVIQIFERDQATG 340 (361)
T ss_dssp TTSCEEEEEETTTTEEEEEEECTTTC
T ss_pred CCCCEEEEEECCCCCEEEEEEECCCC
Confidence 9886 8888877788777 565533
No 106
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=97.27 E-value=0.0091 Score=65.21 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=55.5
Q ss_pred EEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCC
Q psy11781 924 SVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR 1003 (1228)
Q Consensus 924 ~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~ 1003 (1228)
.....+++||...+.. +|.+||++++++++++.++.. .....++++. ++.++|++....
T Consensus 6 ~~~~~~~~~v~~~~~~------------~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~s~----dg~~~~v~~~~~ 64 (349)
T 1jmx_B 6 ALKAGHEYMIVTNYPN------------NLHVVDVASDTVYKSCVMPDK-----FGPGTAMMAP----DNRTAYVLNNHY 64 (349)
T ss_dssp CCCTTCEEEEEEETTT------------EEEEEETTTTEEEEEEECSSC-----CSSCEEEECT----TSSEEEEEETTT
T ss_pred cccCCCEEEEEeCCCC------------eEEEEECCCCcEEEEEecCCC-----CCCceeEECC----CCCEEEEEeCCC
Confidence 3455678888876642 799999999999999988642 1234566642 356899999888
Q ss_pred CeEEEEECCCCeEEE
Q psy11781 1004 YGLIVYDFFKNTSYR 1018 (1228)
Q Consensus 1004 ~gLIVydl~~g~swR 1018 (1228)
..|.+||+++++.-+
T Consensus 65 ~~i~~~d~~t~~~~~ 79 (349)
T 1jmx_B 65 GDIYGIDLDTCKNTF 79 (349)
T ss_dssp TEEEEEETTTTEEEE
T ss_pred CcEEEEeCCCCcEEE
Confidence 999999999987654
No 107
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.27 E-value=0.019 Score=68.22 Aligned_cols=242 Identities=9% Similarity=0.080 Sum_probs=131.8
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeE
Q psy11781 466 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 545 (1228)
Q Consensus 466 ~lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~ 545 (1228)
+...+..+++-++| |+|--.|..+. ..+..|+++|.+|++++++++.+.. +..+--++.+.. ++..
T Consensus 136 g~s~Ph~~~~~pdG-i~Vs~~g~~~g------~~~g~v~vlD~~T~~v~~~~~~~~~---~~~~~Yd~~~~p----~~~~ 201 (462)
T 2ece_A 136 GYSRLHTVHCGPDA-IYISALGNEEG------EGPGGILMLDHYSFEPLGKWEIDRG---DQYLAYDFWWNL----PNEV 201 (462)
T ss_dssp CEEEEEEEEECSSC-EEEEEEEETTS------CSCCEEEEECTTTCCEEEECCSBCT---TCCCCCCEEEET----TTTE
T ss_pred CCCcccceeECCCe-EEEEcCCCcCC------CCCCeEEEEECCCCeEEEEEccCCC---CccccceEEECC----CCCE
Confidence 45577888888888 88876665431 3567899999999999998887533 222222566653 3568
Q ss_pred EEEec------------------CCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCC
Q psy11781 546 AYVND------------------VFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 607 (1228)
Q Consensus 546 aYItD------------------s~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~ 607 (1228)
+|.++ .....|.|||+.+++.-. ++.+... -.+..+|++
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~-------------tI~vg~~----g~~P~~i~f------ 258 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH-------------SLTLGEE----NRMALELRP------ 258 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE-------------EEESCTT----EEEEEEEEE------
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee-------------EEecCCC----CCccceeEe------
Confidence 88997 236889999999863222 1111100 001112222
Q ss_pred cccCCCccccccccccccCccccccccCCCceEEEeeC-----CCCceEEEechhhcCCCCCCCccccc--cceE---ee
Q psy11781 608 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSL-----SSNRHYYVSTTDLRNSSRYVNSSDID--EYFH---YL 677 (1228)
Q Consensus 608 ~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~l-----ss~~ly~V~T~~Lr~~~~~~~~~~~~--~~v~---~l 677 (1228)
+.+|+++++|...- -+..++...-. ++.+ ...+.. ...+ .+
T Consensus 259 ------------------------~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d---~g~~--~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 259 ------------------------LHDPTKLMGFINMVVSLKDLSSSIWLWFYE---DGKW--NAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp ------------------------CSSTTCCEEEEEEEEETTTCCEEEEEEEEE---TTEE--EEEEEEEECCEECCSSC
T ss_pred ------------------------eECCCCCEEEEEEeeeccCCCceEEEEEec---CCce--eEEEEEeCCCccccccc
Confidence 12457888888763 23245433221 1111 000000 0000 00
Q ss_pred c-----cccccccccceEEccCC-cEEEEcCCCCeEEEEeCCCCccCCCCeeEEEec-----------CCceecCCceEE
Q psy11781 678 G-----SRFRNTQASASAINSNG-VMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS-----------RDILNFPNDLKI 740 (1228)
Q Consensus 678 G-----~~g~~~qs~G~a~D~~G-~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~-----------d~~L~wPd~l~I 740 (1228)
. -.+..+.+.++.++.+| .||++.-..+.|.+++.. .+-+..-++.|... .+--.+|.++.+
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~l 388 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEI 388 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEE
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEE
Confidence 0 00001347889999766 799999999999999985 33222222333221 001127999999
Q ss_pred cCCCc-EEEEecCccccccCCCCCccccEEEEEEec
Q psy11781 741 DPNDN-IWILSNKLHQYLYGFLDFNVYNYRILVANS 775 (1228)
Q Consensus 741 d~dg~-LyVlsnrl~~~~~~~~d~~e~nfrI~r~~v 775 (1228)
++||. |||...-+..+-. ++-+++.+-.++++++
T Consensus 389 SpDGk~LyVaNsl~~~wd~-Qfyp~~~~~~~~~~~v 423 (462)
T 2ece_A 389 SRDGRRVYVTNSLYSTWDN-QFYPEGLKGWMVKLNA 423 (462)
T ss_dssp CTTSSEEEEECCCCHHHHH-HHSTTCCCCEEEEEEE
T ss_pred cCCCCEEEEEcCCcccccc-cccCCCCceEEEEEEe
Confidence 99995 6665532222210 1111234455665554
No 108
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.22 E-value=0.02 Score=68.00 Aligned_cols=220 Identities=10% Similarity=0.112 Sum_probs=121.7
Q ss_pred cceEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 916 SLISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 916 ~lvSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
+......++.-.+| |+|--.|..+. ..+..|+++|.+|++++++++.+.. +..+--++.... ++..
T Consensus 136 g~s~Ph~~~~~pdG-i~Vs~~g~~~g------~~~g~v~vlD~~T~~v~~~~~~~~~---~~~~~Yd~~~~p----~~~~ 201 (462)
T 2ece_A 136 GYSRLHTVHCGPDA-IYISALGNEEG------EGPGGILMLDHYSFEPLGKWEIDRG---DQYLAYDFWWNL----PNEV 201 (462)
T ss_dssp CEEEEEEEEECSSC-EEEEEEEETTS------CSCCEEEEECTTTCCEEEECCSBCT---TCCCCCCEEEET----TTTE
T ss_pred CCCcccceeECCCe-EEEEcCCCcCC------CCCCeEEEEECCCCeEEEEEccCCC---CccccceEEECC----CCCE
Confidence 35577788888888 88866666431 3567899999999999998887533 111222344432 3568
Q ss_pred EEEEcC------------------CCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccc
Q psy11781 996 AYVNDV------------------FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSG 1057 (1228)
Q Consensus 996 aYItD~------------------~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~ 1057 (1228)
+|.++= ....|.|||+.+++--. ++.+.... .+..+|+
T Consensus 202 mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~-------------tI~vg~~g----~~P~~i~------- 257 (462)
T 2ece_A 202 LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH-------------SLTLGEEN----RMALELR------- 257 (462)
T ss_dssp EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE-------------EEESCTTE----EEEEEEE-------
T ss_pred EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee-------------EEecCCCC----CccceeE-------
Confidence 899972 36889999999863222 11111000 0011111
Q ss_pred cccCCCccccccccccccCccccceecCCCceEEEEeC-----CCCceEEEecchhcCCcccCCccccc-cceEEec---
Q psy11781 1058 KYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSL-----SSNRHYYVSTTDLRNSSRYVNSSDID-EYFHYLG--- 1128 (1228)
Q Consensus 1058 ~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~pl-----ss~~ly~V~T~~Lr~~~~~~~~~~~~-~~v~~lG--- 1128 (1228)
++.+|+++++|-..- -|..++...-. +..+ .....+. ..-+..+
T Consensus 258 -----------------------f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d---~g~~-~~~~vIdi~~~~v~~~lp 310 (462)
T 2ece_A 258 -----------------------PLHDPTKLMGFINMVVSLKDLSSSIWLWFYE---DGKW-NAEKVIEIPAEPLEGNLP 310 (462)
T ss_dssp -----------------------ECSSTTCCEEEEEEEEETTTCCEEEEEEEEE---TTEE-EEEEEEEECCEECCSSCC
T ss_pred -----------------------eeECCCCCEEEEEEeeeccCCCceEEEEEec---CCce-eEEEEEeCCCcccccccc
Confidence 122567888887663 22335433221 1110 0000000 0000000
Q ss_pred -----cccCCCCcccEEEcCCC-cEEEEecCCCeEEEEeCCCCccccCCeeEEEec-----------CCceecCCceEEe
Q psy11781 1129 -----SRFRNTQASASAINSNG-VMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTS-----------RDILNFPNDLKID 1191 (1228)
Q Consensus 1129 -----~rg~~sqs~g~~~D~~G-~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~-----------~~~L~wPd~l~id 1191 (1228)
-++..+.+.++.++.+| .||++.-.++.|..++.. .+-+++-.+.|... .+-..+|.+|.++
T Consensus 311 ~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~-d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lS 389 (462)
T 2ece_A 311 EILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS-NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEIS 389 (462)
T ss_dssp GGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS-STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEEC
T ss_pred ccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec-CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEc
Confidence 00001247788999777 799999999999999975 33222122222221 0011279999999
Q ss_pred CCCc-EEEEeC
Q psy11781 1192 PNDN-IWILSN 1201 (1228)
Q Consensus 1192 ~dg~-Lyvlsn 1201 (1228)
+||. |||...
T Consensus 390 pDGk~LyVaNs 400 (462)
T 2ece_A 390 RDGRRVYVTNS 400 (462)
T ss_dssp TTSSEEEEECC
T ss_pred CCCCEEEEEcC
Confidence 9994 676654
No 109
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=97.14 E-value=0.0084 Score=66.88 Aligned_cols=165 Identities=16% Similarity=0.231 Sum_probs=98.2
Q ss_pred eEEEEEEEeCCCc-EEEEeCCCCCcccCcCccCCCEEEEEECCCCc-------EE-----EEEECCCcccccCCCceeEE
Q psy11781 468 ISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNT-------LI-----RKYILPTAQVFEGSLFSNIV 534 (1228)
Q Consensus 468 vsV~~v~iD~~gR-LWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~-------vi-----~~y~~p~~v~~~~S~l~di~ 534 (1228)
-.+..+.++++|+ |++.|.|.- +|.+|++..+. +. ....++ .++....++
T Consensus 155 ~~~~~~~~spdg~~l~~~~~~~~------------~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~ 217 (361)
T 3scy_A 155 PHLHCVRITPDGKYLLADDLGTD------------QIHKFNINPNANADNKEKFLTKGTPEAFKVA-----PGSGPRHLI 217 (361)
T ss_dssp CCEEEEEECTTSSEEEEEETTTT------------EEEEEEECTTCCTTTCCCCEEEEEEEEEECC-----TTCCEEEEE
T ss_pred CcceEEEECCCCCEEEEEeCCCC------------EEEEEEEcCCCCcccccceeecccccceecC-----CCCCCeEEE
Confidence 3467889999996 999987642 37777666433 32 223332 234556777
Q ss_pred EEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCc
Q psy11781 535 TEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPY 614 (1228)
Q Consensus 535 VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~ 614 (1228)
++. ++.++|+++.....|.|||+.+++...+..-...+. + ..+..+|+++
T Consensus 218 ~sp----dg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~---------~-----~~~~~~i~~s------------ 267 (361)
T 3scy_A 218 FNS----DGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTV---------N-----AQGSGDIHLS------------ 267 (361)
T ss_dssp ECT----TSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSS---------C-----CCCEEEEEEC------------
T ss_pred EcC----CCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCC---------C-----CCCcccEEEC------------
Confidence 762 456899999888899999999876543321000000 0 0122344554
Q ss_pred cccccccccccCccccccccCCCceEEEeeCC-CCc--eEEEechhhcCCCCCCCccccccceEeeccccccccccceEE
Q psy11781 615 EYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLS-SNR--HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAI 691 (1228)
Q Consensus 615 ~~~~~~~~~~~~~~~~i~is~d~r~LYf~~ls-s~~--ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~ 691 (1228)
|||++||..... ... +|.++.+ .+.+ ..+..+.. | ....++++
T Consensus 268 --------------------pdg~~l~v~~~~~~~~i~v~~~~~~---~g~~--------~~~~~~~~-g--~~~~~~~~ 313 (361)
T 3scy_A 268 --------------------PDGKYLYASNRLKADGVAIFKVDET---NGTL--------TKVGYQLT-G--IHPRNFII 313 (361)
T ss_dssp --------------------TTSSEEEEEECSSSCEEEEEEECTT---TCCE--------EEEEEEEC-S--SCCCEEEE
T ss_pred --------------------CCCCEEEEECCCCCCEEEEEEEcCC---CCcE--------EEeeEecC-C--CCCceEEE
Confidence 488999987766 333 4544311 1111 11121211 2 24678999
Q ss_pred ccCCc-EEEEcCCCCeEEEE--eCC
Q psy11781 692 NSNGV-MFYNLVTKHSVGCW--NTK 713 (1228)
Q Consensus 692 D~~G~-LY~t~~~~~aI~~w--n~~ 713 (1228)
+.+|. ||++....+.|..| |+.
T Consensus 314 spdg~~l~~~~~~~~~v~v~~~d~~ 338 (361)
T 3scy_A 314 TPNGKYLLVACRDTNVIQIFERDQA 338 (361)
T ss_dssp CTTSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCCCEEEEEECCCCCEEEEEEECC
Confidence 98886 88888777888884 554
No 110
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=97.07 E-value=0.039 Score=59.67 Aligned_cols=84 Identities=11% Similarity=-0.009 Sum_probs=58.3
Q ss_pred EEEEEEeCCC-cEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 920 VFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 920 V~~v~iD~~g-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
+..+.++++| +||+.+.+. .+|.+||+.++++++++.++..-. .+.....++++. ++.++|+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~----dg~~l~~ 98 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS------------ESLVKIDLVTGETLGRIDLSTPEE-RVKSLFGAALSP----DGKTLAI 98 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT------------TEEEEEETTTCCEEEEEECCBTTE-EEECTTCEEECT----TSSEEEE
T ss_pred ccceEEcCCCCEEEEEeCCC------------CeEEEEECCCCCeEeeEEcCCccc-ccccccceEECC----CCCEEEE
Confidence 4456788888 588887543 279999999999999988854110 011344566652 3568999
Q ss_pred EcC-----------CCCeEEEEECCCCeEEEee
Q psy11781 999 NDV-----------FRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 999 tD~-----------~~~gLIVydl~~g~swRv~ 1020 (1228)
++. ....|.|||+++++..+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EecccccccccccccCceEEEEECCCCcEEEEE
Confidence 963 2478999999998876543
No 111
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.98 E-value=0.026 Score=61.60 Aligned_cols=174 Identities=12% Similarity=0.093 Sum_probs=106.0
Q ss_pred EEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecC
Q psy11781 472 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 551 (1228)
Q Consensus 472 ~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs 551 (1228)
.+.+|..|+|||...+ -.|.+||.+ ++++.++.++. .....+.+| .++.+|++.
T Consensus 141 ~~~~~~~g~l~vgt~~-------------~~l~~~d~~-g~~~~~~~~~~------~~~~~~~~d-----~~g~l~v~t- 194 (330)
T 3hxj_A 141 TPIVSEDGTIYVGSND-------------NYLYAINPD-GTEKWRFKTND------AITSAASIG-----KDGTIYFGS- 194 (330)
T ss_dssp CCEECTTSCEEEECTT-------------SEEEEECTT-SCEEEEEECSS------CCCSCCEEC-----TTCCEEEES-
T ss_pred eeEEcCCCEEEEEcCC-------------CEEEEECCC-CCEeEEEecCC------CceeeeEEc-----CCCEEEEEe-
Confidence 4467889999996432 249999999 88888887653 345567776 567899998
Q ss_pred CCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccc
Q psy11781 552 FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDK 631 (1228)
Q Consensus 552 ~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i 631 (1228)
.+|..||......|+..... ..+.++++++
T Consensus 195 --~~l~~~d~~g~~~~~~~~~~--------------------~~~~~~~~~~---------------------------- 224 (330)
T 3hxj_A 195 --DKVYAINPDGTEKWNFYAGY--------------------WTVTRPAISE---------------------------- 224 (330)
T ss_dssp --SSEEEECTTSCEEEEECCSS--------------------CCCSCCEECT----------------------------
T ss_pred --CEEEEECCCCcEEEEEccCC--------------------cceeceEECC----------------------------
Confidence 79999995445667754210 0122233322
Q ss_pred cccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEe
Q psy11781 632 TIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWN 711 (1228)
Q Consensus 632 ~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn 711 (1228)
+ ..||+....+ .++++.. +.. .+..+...+ .....+++|++|+||++.. .+.|.|+|
T Consensus 225 ----~-g~l~v~t~~~-gl~~~~~----~g~----------~~~~~~~~~--~~~~~~~~~~~g~l~v~t~-~ggl~~~d 281 (330)
T 3hxj_A 225 ----D-GTIYVTSLDG-HLYAINP----DGT----------EKWRFKTGK--RIESSPVIGNTDTIYFGSY-DGHLYAIN 281 (330)
T ss_dssp ----T-SCEEEEETTT-EEEEECT----TSC----------EEEEEECSS--CCCSCCEECTTSCEEEECT-TCEEEEEC
T ss_pred ----C-CeEEEEcCCC-eEEEECC----CCC----------EeEEeeCCC--CccccceEcCCCeEEEecC-CCCEEEEC
Confidence 2 2577766544 4777631 111 011111111 1235678899999999865 45899999
Q ss_pred CCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEecC
Q psy11781 712 TKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 752 (1228)
Q Consensus 712 ~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnr 752 (1228)
++ +... ..... .. .....+.++.+|.|||.++.
T Consensus 282 ~~-g~~~----~~~~~-~~--~~~~~~~~d~~g~l~~gt~~ 314 (330)
T 3hxj_A 282 PD-GTEK----WNFET-GS--WIIATPVIDENGTIYFGTRN 314 (330)
T ss_dssp TT-SCEE----EEEEC-SS--CCCSCCEECTTCCEEEECTT
T ss_pred CC-CcEE----EEEEc-CC--ccccceEEcCCCEEEEEcCC
Confidence 86 4321 11111 11 23456788889999998853
No 112
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.95 E-value=0.033 Score=63.38 Aligned_cols=91 Identities=15% Similarity=0.115 Sum_probs=64.7
Q ss_pred EEEEeCCC-cEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEc
Q psy11781 922 RMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVND 1000 (1228)
Q Consensus 922 ~v~iD~~g-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD 1000 (1228)
.+.++++| +|||......... .-...-.|.+||+.|.++++++.++......+..-..|+++. ++.++|++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~---~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp----dg~~l~v~n 126 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERIT---RGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT----DGKFIVLQN 126 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSS---SSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT----TSSEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccc---cCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC----CCCEEEEEC
Confidence 78888887 5999875321100 000112699999999999999998754433345567788873 478999998
Q ss_pred CC-CCeEEEEECCCCeEEEe
Q psy11781 1001 VF-RYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 1001 ~~-~~gLIVydl~~g~swRv 1019 (1228)
.+ ...|-|||+++++.-+.
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEE
T ss_pred CCCCCeEEEEECCCCcEEEE
Confidence 76 57899999999987664
No 113
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.93 E-value=0.039 Score=60.16 Aligned_cols=174 Identities=12% Similarity=0.097 Sum_probs=104.4
Q ss_pred EEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC
Q psy11781 922 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 1001 (1228)
Q Consensus 922 ~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~ 1001 (1228)
.+.+|..|+|||-..+ -.|.+||.+ ++++.++.++.. ....+.+| .++.+|++.
T Consensus 141 ~~~~~~~g~l~vgt~~-------------~~l~~~d~~-g~~~~~~~~~~~------~~~~~~~d-----~~g~l~v~t- 194 (330)
T 3hxj_A 141 TPIVSEDGTIYVGSND-------------NYLYAINPD-GTEKWRFKTNDA------ITSAASIG-----KDGTIYFGS- 194 (330)
T ss_dssp CCEECTTSCEEEECTT-------------SEEEEECTT-SCEEEEEECSSC------CCSCCEEC-----TTCCEEEES-
T ss_pred eeEEcCCCEEEEEcCC-------------CEEEEECCC-CCEeEEEecCCC------ceeeeEEc-----CCCEEEEEe-
Confidence 4467889999995321 169999999 998888887532 35566776 467899998
Q ss_pred CCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccc
Q psy11781 1002 FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDK 1081 (1228)
Q Consensus 1002 ~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di 1081 (1228)
.+|.++|......|+..... ..+.++++
T Consensus 195 --~~l~~~d~~g~~~~~~~~~~--------------------~~~~~~~~------------------------------ 222 (330)
T 3hxj_A 195 --DKVYAINPDGTEKWNFYAGY--------------------WTVTRPAI------------------------------ 222 (330)
T ss_dssp --SSEEEECTTSCEEEEECCSS--------------------CCCSCCEE------------------------------
T ss_pred --CEEEEECCCCcEEEEEccCC--------------------cceeceEE------------------------------
Confidence 79999995445667653210 01112222
Q ss_pred eecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEe
Q psy11781 1082 TIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWN 1161 (1228)
Q Consensus 1082 ~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn 1161 (1228)
++++ .||.....+ .+++++. +.. . +......+ .....+++|++|+||++.- ...|.|+|
T Consensus 223 --~~~g-~l~v~t~~~-gl~~~~~----~g~-------~---~~~~~~~~--~~~~~~~~~~~g~l~v~t~-~ggl~~~d 281 (330)
T 3hxj_A 223 --SEDG-TIYVTSLDG-HLYAINP----DGT-------E---KWRFKTGK--RIESSPVIGNTDTIYFGSY-DGHLYAIN 281 (330)
T ss_dssp --CTTS-CEEEEETTT-EEEEECT----TSC-------E---EEEEECSS--CCCSCCEECTTSCEEEECT-TCEEEEEC
T ss_pred --CCCC-eEEEEcCCC-eEEEECC----CCC-------E---eEEeeCCC--CccccceEcCCCeEEEecC-CCCEEEEC
Confidence 2222 567766544 3776631 111 0 11111111 1234567888999999865 45899999
Q ss_pred CCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1162 TKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1162 ~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
++ +... ..... .. .....+.+|.+|.||+-+++
T Consensus 282 ~~-g~~~----~~~~~-~~--~~~~~~~~d~~g~l~~gt~~ 314 (330)
T 3hxj_A 282 PD-GTEK----WNFET-GS--WIIATPVIDENGTIYFGTRN 314 (330)
T ss_dssp TT-SCEE----EEEEC-SS--CCCSCCEECTTCCEEEECTT
T ss_pred CC-CcEE----EEEEc-CC--ccccceEEcCCCEEEEEcCC
Confidence 86 5421 11111 11 23456788899999998854
No 114
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=96.83 E-value=0.053 Score=58.60 Aligned_cols=84 Identities=11% Similarity=-0.009 Sum_probs=58.5
Q ss_pred EEEEEEeCCC-cEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 470 VFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 470 V~~v~iD~~g-RLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
+..+.++++| +||+.+.+. .+|.+||+.++++++++.++..-. .+.....++++. ++.++|+
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~------------~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~s~----dg~~l~~ 98 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS------------ESLVKIDLVTGETLGRIDLSTPEE-RVKSLFGAALSP----DGKTLAI 98 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT------------TEEEEEETTTCCEEEEEECCBTTE-EEECTTCEEECT----TSSEEEE
T ss_pred ccceEEcCCCCEEEEEeCCC------------CeEEEEECCCCCeEeeEEcCCccc-ccccccceEECC----CCCEEEE
Confidence 4557788887 688887542 359999999999999888854110 112355677762 4558999
Q ss_pred ecC-----------CCCeEEEEEcCCCeEEEEc
Q psy11781 549 NDV-----------FRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 549 tDs-----------~~~gLIVyDl~~g~swRv~ 570 (1228)
++. ....|.|||+.+++.-+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 131 (337)
T 1pby_B 99 YESPVRLELTHFEVQPTRVALYDAETLSRRKAF 131 (337)
T ss_dssp EEEEEEECSSCEEECCCEEEEEETTTTEEEEEE
T ss_pred EecccccccccccccCceEEEEECCCCcEEEEE
Confidence 962 2478999999998765543
No 115
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.82 E-value=0.076 Score=64.19 Aligned_cols=173 Identities=9% Similarity=0.098 Sum_probs=109.8
Q ss_pred EEEEEEeCCC-cEEEEeCCCCCccccccccCCCEEEEEEC--CCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEE
Q psy11781 920 VFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDL--KTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 996 (1228)
Q Consensus 920 V~~v~iD~~g-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL--~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~a 996 (1228)
+..+.++.+| +|++.+.+ + +|.+||+ +|+++++++... .....++++.-++-++.++
T Consensus 181 ~~~v~~spdg~~l~v~~~d--~-----------~V~v~D~~~~t~~~~~~i~~g-------~~p~~va~sp~~~~dg~~l 240 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRD--A-----------RIDMIDLWAKEPTKVAEIKIG-------IEARSVESSKFKGYEDRYT 240 (543)
T ss_dssp EEEEEECTTSCEEEEEETT--S-----------EEEEEETTSSSCEEEEEEECC-------SEEEEEEECCSTTCTTTEE
T ss_pred cceEEECCCCCEEEEECCC--C-----------eEEEEECcCCCCcEEEEEecC-------CCcceEEeCCCcCCCCCEE
Confidence 6788888887 58888765 2 7999999 899999877642 3345566652000036799
Q ss_pred EEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccC
Q psy11781 997 YVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNG 1076 (1228)
Q Consensus 997 YItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~ 1076 (1228)
|++....+.|.|+|.++++..+...- . ...+++..|.-...+.
T Consensus 241 ~v~~~~~~~v~v~D~~t~~~~~~i~~--~------g~~~~~~~~~~~~~v~----------------------------- 283 (543)
T 1nir_A 241 IAGAYWPPQFAIMDGETLEPKQIVST--R------GMTVDTQTYHPEPRVA----------------------------- 283 (543)
T ss_dssp EEEEEESSEEEEEETTTCCEEEEEEC--C------EECSSSCCEESCCCEE-----------------------------
T ss_pred EEEEccCCeEEEEeccccccceeecc--c------CcccCccccccCCceE-----------------------------
Confidence 99998888999999999876664321 0 0001111111000111
Q ss_pred ccccceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCc-EEEEecCCC
Q psy11781 1077 TNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKH 1155 (1228)
Q Consensus 1077 ~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~-LY~t~~~~~ 1155 (1228)
.|..|++++.+|+.-..+.++..++++..+... +..++. + ....++++|.+|. +|.+.-..+
T Consensus 284 ---~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-----------~~~i~~-~--~~~~~~~~spdg~~l~va~~~~~ 346 (543)
T 1nir_A 284 ---AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-----------VTSIGA-A--PFLHDGGWDSSHRYFMTAANNSN 346 (543)
T ss_dssp ---EEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-----------EEEEEC-C--SSCCCEEECTTSCEEEEEEGGGT
T ss_pred ---EEEECCCCCEEEEEECCCCeEEEEEecCCCcce-----------eEEecc-C--cCccCceECCCCCEEEEEecCCC
Confidence 155677888888888777788888765432211 112221 1 2356789999997 666777788
Q ss_pred eEEEEeCCCCc
Q psy11781 1156 SVGCWNTKTKV 1166 (1228)
Q Consensus 1156 aI~~wn~~~~~ 1166 (1228)
.|..||+++++
T Consensus 347 ~v~v~D~~tg~ 357 (543)
T 1nir_A 347 KVAVIDSKDRR 357 (543)
T ss_dssp EEEEEETTTTE
T ss_pred eEEEEECCCCe
Confidence 99999998443
No 116
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.60 E-value=0.3 Score=56.12 Aligned_cols=90 Identities=12% Similarity=-0.029 Sum_probs=60.8
Q ss_pred EEEEeCCC-cEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECC-CCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 922 RMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILP-TAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 922 ~v~iD~~g-rLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p-~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
.+.+..+| +|||..+...... .-...-.|.+||+.|.+++.++.++ ..-...+..-..++++. ++.++|++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~---rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp----DG~~l~v~ 142 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIA---KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP----NNADLLFF 142 (373)
T ss_pred CeEECCCCCEEEEEeccccccc---cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC----CCCEEEEE
Confidence 66777776 6999986532210 0012346889999999999999997 22111122334677763 47899999
Q ss_pred cCC-CCeEEEEECCCCeEEEe
Q psy11781 1000 DVF-RYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 1000 D~~-~~gLIVydl~~g~swRv 1019 (1228)
... ...|.|+| ++++.-+.
T Consensus 143 n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ecCCCCeEEEEE-CCCCEEeE
Confidence 865 57899999 99887654
No 117
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.55 E-value=0.025 Score=67.24 Aligned_cols=165 Identities=12% Similarity=0.157 Sum_probs=96.1
Q ss_pred eeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeec-CCcCcCCCcceeEEcCEEEEeeCCccceecCcccccccc
Q psy11781 982 NIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH-PYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYK 1060 (1228)
Q Consensus 982 di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h-~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~ 1060 (1228)
.|+++ .++.+||++..+..|++++..+|+.-.+.. +.....| .| ..|++|||+.|.-.
T Consensus 31 ~~a~~-----pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~-------~g-----~~Gllgia~~Pdf~---- 89 (454)
T 1cru_A 31 ALLWG-----PDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDA-------DG-----QNGLLGFAFHPDFK---- 89 (454)
T ss_dssp EEEEC-----TTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCT-------TS-----SCSEEEEEECTTTT----
T ss_pred EEEEc-----CCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccccc-------CC-----CCceeEEEECCCcC----
Confidence 46665 457799999877678888877776655432 1100000 11 23777888875211
Q ss_pred CCCccccccccccccCccccceecCCCceEEEEeCC------------CCceEEEecchhcCCcccCCccccccceEEec
Q psy11781 1061 RHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLS------------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG 1128 (1228)
Q Consensus 1061 ~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~pls------------s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG 1128 (1228)
.+++||+..-. ..++++...+. .+..+ ++...-++.+.
T Consensus 90 -------------------------~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~-~~~~~----~~~~~i~~~~p 139 (454)
T 1cru_A 90 -------------------------NNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNK-STDTL----EKPVDLLAGLP 139 (454)
T ss_dssp -------------------------TSCEEEEEEEEECTTC--CCSCEEEEEEEEEEET-TTTEE----EEEEEEEEEEC
T ss_pred -------------------------cCCEEEEEEeccccCCCccccccccEEEEEEECC-CCCCc----CCcEEEEEcCC
Confidence 26788877642 34677765321 01111 00011112222
Q ss_pred cccCCCCcccEEEcCCCcEEEEecC--------------------------------CCeEEEEeCCCCccccCC-----
Q psy11781 1129 SRFRNTQASASAINSNGVMFYNLVT--------------------------------KHSVGCWNTKTKVYLPQT----- 1171 (1228)
Q Consensus 1129 ~rg~~sqs~g~~~D~~G~LY~t~~~--------------------------------~~aI~~wn~~~~~~~~~n----- 1171 (1228)
..+ .-...++++|.+|.||++.-. ..+|.+.+++ +..-+.|
T Consensus 140 ~~~-~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~~~ 217 (454)
T 1cru_A 140 SSK-DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSFNG 217 (454)
T ss_dssp CCS-SCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEETT
T ss_pred CCC-CCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCCCCC
Confidence 111 123788999999999998432 3579999998 5422222
Q ss_pred --eeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1172 --QDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1172 --~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
.++.+. -+.-|.+|++|++|.||+..+.
T Consensus 218 ~~~ei~a~---G~RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 218 VVSHIYTL---GHRNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp EECSEEEB---CCSEEEEEEECTTSCEEEEEEC
T ss_pred CcceEEEE---CCCCcceEEECCCCCEEEEecC
Confidence 234432 3567899999999999999964
No 118
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=96.55 E-value=0.14 Score=61.88 Aligned_cols=185 Identities=11% Similarity=0.021 Sum_probs=111.5
Q ss_pred EeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCC
Q psy11781 925 VDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY 1004 (1228)
Q Consensus 925 iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 1004 (1228)
+|.+++++|.-.+.- .|.+||+.|+++++++..... ...++++. ++.++|+++.. .
T Consensus 145 ~~p~~~~~vs~~~d~------------~V~v~D~~t~~~~~~i~~g~~-------~~~v~~sp----dg~~l~v~~~d-~ 200 (543)
T 1nir_A 145 LDLPNLFSVTLRDAG------------QIALVDGDSKKIVKVIDTGYA-------VHISRMSA----SGRYLLVIGRD-A 200 (543)
T ss_dssp CCGGGEEEEEEGGGT------------EEEEEETTTCCEEEEEECSTT-------EEEEEECT----TSCEEEEEETT-S
T ss_pred cCCCCEEEEEEcCCC------------eEEEEECCCceEEEEEecCcc-------cceEEECC----CCCEEEEECCC-C
Confidence 456778888755432 689999999999998876432 23455542 57899999987 8
Q ss_pred eEEEEEC--CCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccce
Q psy11781 1005 GLIVYDF--FKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKT 1082 (1228)
Q Consensus 1005 gLIVydl--~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ 1082 (1228)
.|.+||+ ++++.-+. +.. | .+..+ ++
T Consensus 201 ~V~v~D~~~~t~~~~~~-------------i~~-g------~~p~~--------------------------------va 228 (543)
T 1nir_A 201 RIDMIDLWAKEPTKVAE-------------IKI-G------IEARS--------------------------------VE 228 (543)
T ss_dssp EEEEEETTSSSCEEEEE-------------EEC-C------SEEEE--------------------------------EE
T ss_pred eEEEEECcCCCCcEEEE-------------Eec-C------CCcce--------------------------------EE
Confidence 9999999 66543321 110 1 11222 34
Q ss_pred ecC----CCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEecccc------CCCCcccEEEcC-CCcEEEEe
Q psy11781 1083 IRD----DQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF------RNTQASASAINS-NGVMFYNL 1151 (1228)
Q Consensus 1083 ls~----d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg------~~sqs~g~~~D~-~G~LY~t~ 1151 (1228)
+|| |+++||.....+..+..+++.-++ ....+...|... +.....+++++. .+.+|++.
T Consensus 229 ~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~----------~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~ 298 (543)
T 1nir_A 229 SSKFKGYEDRYTIAGAYWPPQFAIMDGETLE----------PKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNV 298 (543)
T ss_dssp ECCSTTCTTTEEEEEEEESSEEEEEETTTCC----------EEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred eCCCcCCCCCEEEEEEccCCeEEEEeccccc----------cceeecccCcccCccccccCCceEEEEECCCCCEEEEEE
Confidence 556 789999887655545555543221 111122112100 001234667775 45778888
Q ss_pred cCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEeC
Q psy11781 1152 VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSN 1201 (1228)
Q Consensus 1152 ~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn 1201 (1228)
-+.+.|..||..+. ++..+.... .=.||.++.++++|. ||+.++
T Consensus 299 ~~~g~i~vvd~~~~----~~l~~~~i~--~~~~~~~~~~spdg~~l~va~~ 343 (543)
T 1nir_A 299 KETGKVLLVNYKDI----DNLTVTSIG--AAPFLHDGGWDSSHRYFMTAAN 343 (543)
T ss_dssp TTTTEEEEEECTTS----SSCEEEEEE--CCSSCCCEEECTTSCEEEEEEG
T ss_pred CCCCeEEEEEecCC----CcceeEEec--cCcCccCceECCCCCEEEEEec
Confidence 88999999998732 222211111 125899999999996 665543
No 119
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.54 E-value=0.029 Score=66.68 Aligned_cols=167 Identities=13% Similarity=0.136 Sum_probs=97.8
Q ss_pred ceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEE-cCeEeeecCCcceeecCcccCCc
Q psy11781 530 FSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYIL-DNLKFRWVDGIFGMAISPELSGK 608 (1228)
Q Consensus 530 l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i-~G~~f~~~dGi~GIALsp~~~~~ 608 (1228)
-..|+++ .++.+||++.....|.+++..+|+.-.+..- ++ .+.. .| ..|++|||++|.-.
T Consensus 29 P~~~a~~-----pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~---~~----~~~~~~g-----~~Gllgia~~Pdf~-- 89 (454)
T 1cru_A 29 PHALLWG-----PDNQIWLTERATGKILRVNPESGSVKTVFQV---PE----IVNDADG-----QNGLLGFAFHPDFK-- 89 (454)
T ss_dssp EEEEEEC-----TTSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT----CCCCTTS-----SCSEEEEEECTTTT--
T ss_pred ceEEEEc-----CCCcEEEEEcCCCEEEEEECCCCcEeEEecC---Cc----cccccCC-----CCceeEEEECCCcC--
Confidence 3467776 4678999998766788888776665554420 00 0000 11 25788999988421
Q ss_pred ccCCCccccccccccccCccccccccCCCceEEEeeCC------------CCceEEEechhhcCCCCCCCccccccceEe
Q psy11781 609 YKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLS------------SNRHYYVSTTDLRNSSRYVNSSDIDEYFHY 676 (1228)
Q Consensus 609 ~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~ls------------s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~ 676 (1228)
.+++||+.... ..++++...+ +... .-.+...-++.
T Consensus 90 ---------------------------~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~---~~~~--~~~~~~~i~~~ 137 (454)
T 1cru_A 90 ---------------------------NNPYIYISGTFKNPKSTDKELPNQTIIRRYTYN---KSTD--TLEKPVDLLAG 137 (454)
T ss_dssp ---------------------------TSCEEEEEEEEECTTC--CCSCEEEEEEEEEEE---TTTT--EEEEEEEEEEE
T ss_pred ---------------------------cCCEEEEEEeccccCCCccccccccEEEEEEEC---CCCC--CcCCcEEEEEc
Confidence 35677776542 2457776532 1110 00000111122
Q ss_pred eccccccccccceEEccCCcEEEEcCC--------------------------------CCeEEEEeCCCCccCCCC---
Q psy11781 677 LGSRFRNTQASASAINSNGVMFYNLVT--------------------------------KHSVGCWNTKTKVYLPQT--- 721 (1228)
Q Consensus 677 lG~~g~~~qs~G~a~D~~G~LY~t~~~--------------------------------~~aI~~wn~~~~~~~~~n--- 721 (1228)
+...+ .-...+|++|.+|.||++.-. ..+|.+.+++ +...+.|
T Consensus 138 ~p~~~-~H~~~~l~f~pDG~Lyv~~Gd~~~~~~~~~~~~~~~~~~p~~~~~~aq~~~~~~G~IlRi~~d-G~ip~~Npf~ 215 (454)
T 1cru_A 138 LPSSK-DHQSGRLVIGPDQKIYYTIGDQGRNQLAYLFLPNQAQHTPTQQELNGKDYHTYMGKVLRLNLD-GSIPKDNPSF 215 (454)
T ss_dssp ECCCS-SCCEEEEEECTTSCEEEEECCTTTTSGGGTTSCCCTTCCCCHHHHHTTCCTTCSSEEEEECTT-SCCCTTCCEE
T ss_pred CCCCC-CCCCCeEeECCCCeEEEEECCCCCCCccccccccccccccccccccccCCCCCCeeEEEEeCC-CCCCCCCCCC
Confidence 22111 123689999999999998432 3679999998 5422222
Q ss_pred ----eeEEEecCCceecCCceEEcCCCcEEEEecC
Q psy11781 722 ----QDIVQTSRDILNFPNDLKIDPNDNIWILSNK 752 (1228)
Q Consensus 722 ----~~iV~~~d~~L~wPd~l~Id~dg~LyVlsnr 752 (1228)
..+.+. .+.-|.+|+++++|.||+..+.
T Consensus 216 ~~~~~ei~a~---G~RNp~gla~dp~G~L~~~d~g 247 (454)
T 1cru_A 216 NGVVSHIYTL---GHRNPQGLAFTPNGKLLQSEQG 247 (454)
T ss_dssp TTEECSEEEB---CCSEEEEEEECTTSCEEEEEEC
T ss_pred CCCcceEEEE---CCCCcceEEECCCCCEEEEecC
Confidence 134432 3456899999999999999865
No 120
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=96.53 E-value=0.069 Score=60.71 Aligned_cols=91 Identities=15% Similarity=0.115 Sum_probs=65.1
Q ss_pred EEEEeCCC-cEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEec
Q psy11781 472 RMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVND 550 (1228)
Q Consensus 472 ~v~iD~~g-RLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItD 550 (1228)
.+.++++| +|||......... .-...-.|.+||+.|.++++++.++......+.....|+++. ++.++|++.
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~---~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~sp----dg~~l~v~n 126 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERIT---RGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTT----DGKFIVLQN 126 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSS---SSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECT----TSSEEEEEE
T ss_pred ceEECCCCCEEEEEEecccccc---cCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECC----CCCEEEEEC
Confidence 78888877 5999875311000 000123599999999999999998754333345677899972 577999998
Q ss_pred CC-CCeEEEEEcCCCeEEEE
Q psy11781 551 VF-RYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 551 s~-~~gLIVyDl~~g~swRv 569 (1228)
.+ ...|-|+|+++++.-+-
T Consensus 127 ~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 127 ASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp ESSSEEEEEEETTTTEEEEE
T ss_pred CCCCCeEEEEECCCCcEEEE
Confidence 76 67899999999977654
No 121
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=96.49 E-value=0.1 Score=60.82 Aligned_cols=128 Identities=13% Similarity=-0.013 Sum_probs=80.7
Q ss_pred CCeEEEEcccCCCCCCcEEEEEECCCCCCCCcccCCCCcCcCCCCCCCcceEEEEEEEeCCCc-EEEEeCCCCCc-ccCc
Q psy11781 418 RSTIFLSFPKWKAGIPFTLASFNMNDPSESPILLPYPNWSYFDDSNCNSLISVFRMSVDKCDR-LWIMDTGVTNI-LSSI 495 (1228)
Q Consensus 418 ~gRiFvt~PR~~~gvP~TL~~v~~~~~~~sp~l~PYP~~~wn~~~~c~~lvsV~~v~iD~~gR-LWVLDtG~~~~-~~~~ 495 (1228)
..|+||+=...... --++..|+.... -.+.-.|- +. .+. +.++++|+ |||.++..... .|
T Consensus 44 ~~~vyV~~~~~~~~-~~~V~ViD~~t~---~v~~~I~v----------G~-~P~-va~spDG~~lyVan~~~~r~~~G-- 105 (386)
T 3sjl_D 44 ARRVYVNDPAHFAA-VTQQFVIDGEAG---RVIGMIDG----------GF-LPN-PVVADDGSFIAHASTVFSRIARG-- 105 (386)
T ss_dssp TTEEEEEECGGGCS-SEEEEEEETTTT---EEEEEEEE----------CS-SCE-EEECTTSSCEEEEEEEEEETTEE--
T ss_pred CCEEEEEcCcccCC-CCEEEEEECCCC---eEEEEEEC----------CC-CCc-EEECCCCCEEEEEcccccccccC--
Confidence 68999998652111 137888875321 11111111 11 123 78888775 99998631100 00
Q ss_pred CccCCCEEEEEECCCCcEEEEEECCCc-ccccCCCceeEEEEeecCCCCeEEEEecCC-CCeEEEEEcCCCeEEEE
Q psy11781 496 QQLCPPKIMVFDLKTNTLIRKYILPTA-QVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-RYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 496 ~~~~~PKLvvfDL~td~vi~~y~~p~~-v~~~~S~l~di~VD~~~~c~~~~aYItDs~-~~gLIVyDl~~g~swRv 569 (1228)
...-.|.+||+.|.++++++.+|.. -...+.....++++. ++.++|++... ...+-|+|.++++.-+-
T Consensus 106 --~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~sp----DGk~lyVan~~~~~~VsVID~~t~~vv~t 175 (386)
T 3sjl_D 106 --ERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTP----DGKTLLFYQFSPAPAVGVVDLEGKAFKRM 175 (386)
T ss_dssp --EEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECT----TSSEEEEEECSSSCEEEEEETTTTEEEEE
T ss_pred --CCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcC----CCCEEEEEEcCCCCeEEEEECCCCcEEEE
Confidence 0013499999999999999999752 122234566788872 57899999875 67899999999986553
No 122
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=96.48 E-value=1.7 Score=56.74 Aligned_cols=228 Identities=11% Similarity=0.093 Sum_probs=113.4
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...++|++-+. |.. .-+|.+||+.+++.++++.-.. .....+.+.. ..+..+.+
T Consensus 659 ~v~~~~~s~~~~~l~s--~~~----------d~~v~vwd~~~~~~~~~~~~~~------~~v~~~~~~~---~~~~~~l~ 717 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIAT--CSA----------DKKVKIWDSATGKLVHTYDEHS------EQVNCCHFTN---KSNHLLLA 717 (1249)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCS------SCEEEEEECS---SSSCCEEE
T ss_pred CEEEEEEecCCCEEEE--EeC----------CCeEEEEECCCCceEEEEcCCC------CcEEEEEEec---CCCceEEE
Confidence 4666777777765443 111 1359999999999998776432 2344555531 12344555
Q ss_pred ecCCCCeEEEEEcCCCeEEEEc--CC------CCCcCCCCcceEE---cCeEeeec--CCcceeecCcccCCcccCCCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLT--HP------YMYPEPTQSTYIL---DNLKFRWV--DGIFGMAISPELSGKYKRHPYE 615 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~--~~------s~~pdP~~~~~~i---~G~~f~~~--dGi~GIALsp~~~~~~~~~~~~ 615 (1228)
+-+..+.|.|||+.+++.-+.. |. .|.|+.. .+.. +|.-..|. .|-.-..+..... ..
T Consensus 718 sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~------~~- 788 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE--LLASCSADGTLRLWDVRSANERKSINVKRF------FL- 788 (1249)
T ss_dssp EEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT--EEEEEESSSEEEEEEGGGTEEEEEEECCCC------C--
T ss_pred EEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC--EEEEEECCCeEEEEeCCCCcccceeccccc------cc-
Confidence 5556778999999998866554 21 1223211 1111 12211221 1100000000000 00
Q ss_pred ccccccccccCcccc-ccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccC
Q psy11781 616 YYHYNVHHYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSN 694 (1228)
Q Consensus 616 ~~~~~~~~~~~~~~~-i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~ 694 (1228)
....+... ....+. ++.+++++.+....-. .++..+. .... ....+ ..|.. +....+++..+
T Consensus 789 ~~~~~~~~-~~~~v~~~~~s~dg~~l~~~~~~--~v~~~d~---~~~~-------~~~~~-~~~~~---~~v~~~~~sp~ 851 (1249)
T 3sfz_A 789 SSEDPPED-VEVIVKCCSWSADGDKIIVAAKN--KVLLFDI---HTSG-------LLAEI-HTGHH---STIQYCDFSPY 851 (1249)
T ss_dssp -------C-CCCCBCCCCBCTTSSEEEEEETT--EEEEEET---TTCC-------EEEEE-ECSSS---SCCCEEEECSS
T ss_pred ccCCcccc-ccceEEEEEECCCCCEEEEEcCC--cEEEEEe---cCCC-------ceeEE-cCCCC---CceEEEEEcCC
Confidence 00000000 011233 6788999988887633 3333321 1111 00111 11222 34567888889
Q ss_pred CcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 695 GVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 695 G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
|.+.++-...+.|..|+..++ ..+..-...-.+..++++.++|...+..
T Consensus 852 ~~~l~~~~~dg~v~vwd~~~~-------~~~~~~~~h~~~v~~v~~spdg~~l~s~ 900 (1249)
T 3sfz_A 852 DHLAVIALSQYCVELWNIDSR-------LKVADCRGHLSWVHGVMFSPDGSSFLTA 900 (1249)
T ss_dssp TTEEEEECSSSCEEEEETTTT-------EEEEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCEEEEEeCCCeEEEEEcCCC-------ceeeecCCCccceEEEEECCCCCEEEEE
Confidence 999999889999999999722 1111111222455677777777543433
No 123
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.42 E-value=0.088 Score=60.53 Aligned_cols=160 Identities=13% Similarity=0.062 Sum_probs=91.5
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccc
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVH 1072 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~ 1072 (1228)
++.+||++...+.|.+++..+++.-.+..- |+ ....| ..|.+|||++|.-.
T Consensus 42 dG~llVter~~G~I~~v~~~~g~~~~v~~~---~~-----v~~~g-----~~GllGia~~Pdf~---------------- 92 (347)
T 3das_A 42 GGDLLVSSRDEATITRVDAKTGRKTELGEV---PG-----VSPSG-----EGGLLGIALSPDYA---------------- 92 (347)
T ss_dssp TSCEEEEETTTCEEEEECTTTCCEEEEEEC---TT-----CCCBT-----TBSEEEEEECTTHH----------------
T ss_pred CCcEEEEEecCCEEEEEECCCCcEeeeccc---Cc-----eeecC-----CCCceeeEeccccc----------------
Confidence 466888887666788887766655433210 00 00112 23777888875210
Q ss_pred cccCccccceecCCCceEEE--EeCCCCceEEEecchhc--CCcccCCccccccceEEeccccCCCCcccEEEcCCCcEE
Q psy11781 1073 HYNGTNVDKTIRDDQRYMYF--HSLSSNRHYYVSTTDLR--NSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMF 1148 (1228)
Q Consensus 1073 ~~~~~~~di~ls~d~r~LYf--~plss~~ly~V~T~~Lr--~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY 1148 (1228)
.+++||+ +..+..++.+...+--. ...+ . +...-++.+.. +..-....++++.+|.||
T Consensus 93 -------------~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~--~--~~~~i~~~~p~-~~~H~g~~l~fgpDG~Ly 154 (347)
T 3das_A 93 -------------SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQL--G--APDTVFRGIPK-GVIHNGGRIAFGPDKMLY 154 (347)
T ss_dssp -------------HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCB--C--CCEEEEEEECC-CSSCCCCCEEECTTSCEE
T ss_pred -------------cCCEEEEEEecCCCCEEEEEEeCCCCcccccC--C--CcEEEEEcCCC-CCCccCccccCCCCCCEE
Confidence 1355665 44556677777532100 0111 0 01111222221 211225679999999999
Q ss_pred EEec-------------CCCeEEEEeCCCCccccC----CeeEEEecCCceecCCceEEeCCCcEEEEeCCc
Q psy11781 1149 YNLV-------------TKHSVGCWNTKTKVYLPQ----TQDIVQTSRDILNFPNDLKIDPNDNIWILSNKL 1203 (1228)
Q Consensus 1149 ~t~~-------------~~~aI~~wn~~~~~~~~~----n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~l 1203 (1228)
++.= ...+|.+.+++ +...+. +.++.+. -+.-|-+|+++++|.||+..+.-
T Consensus 155 vt~Gd~~~~~~~qd~~~~~G~IlRi~~d-G~ip~~nPf~~~~i~a~---G~RNp~Gla~dp~G~L~~~d~g~ 222 (347)
T 3das_A 155 AGTGESGDTGLSQDRKSLGGKILRMTPD-GEPAPGNPFPGSPVYSY---GHRNVQGLAWDDKQRLFASEFGQ 222 (347)
T ss_dssp EECBCTTCGGGTTCTTCSTTCEEEECTT-SSBCTTCSSTTCCEEEB---CCSBCCEEEECTTCCEEEEECCS
T ss_pred EEECCCCCCccccCCCCCCCEEEEEeCC-CCccCCCCCCCCeEEee---CCCCcceEEECCCCCEEEEecCC
Confidence 9952 36789999998 542222 2244442 46679999999999999999754
No 124
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.35 E-value=0.023 Score=64.99 Aligned_cols=72 Identities=8% Similarity=-0.004 Sum_probs=46.1
Q ss_pred cceEEEEEEEeCCCc-EEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEE-ECCCcccccCCCceeEEEEeecCCCC
Q psy11781 466 SLISVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKY-ILPTAQVFEGSLFSNIVTEVVEDCDH 543 (1228)
Q Consensus 466 ~lvsV~~v~iD~~gR-LWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y-~~p~~v~~~~S~l~di~VD~~~~c~~ 543 (1228)
+|..+..|..|++|| |||.+.+ -+|.++|.. +++...+ .+|.-.......+.+|+++..-. .+
T Consensus 16 ~l~~P~~i~~~pdG~~l~V~e~~-------------G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~-~~ 80 (353)
T 2g8s_A 16 KLDHPWALAFLPDNHGMLITLRG-------------GELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFA-QS 80 (353)
T ss_dssp EESSEEEEEECSTTCCEEEEETT-------------TEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHH-HH
T ss_pred CCCCcEEEEEcCCCCEEEEEeCC-------------ceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCC-CC
Confidence 577888999999999 9999973 148888853 3332111 23321222345788999973100 16
Q ss_pred eEEEEecCC
Q psy11781 544 VFAYVNDVF 552 (1228)
Q Consensus 544 ~~aYItDs~ 552 (1228)
+++|++++.
T Consensus 81 g~lYv~~~~ 89 (353)
T 2g8s_A 81 RRIWLSYSE 89 (353)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEeC
Confidence 899999865
No 125
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=96.35 E-value=0.29 Score=56.19 Aligned_cols=90 Identities=12% Similarity=-0.029 Sum_probs=61.6
Q ss_pred EEEEeCCC-cEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECC-CcccccCCCceeEEEEeecCCCCeEEEEe
Q psy11781 472 RMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILP-TAQVFEGSLFSNIVTEVVEDCDHVFAYVN 549 (1228)
Q Consensus 472 ~v~iD~~g-RLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p-~~v~~~~S~l~di~VD~~~~c~~~~aYIt 549 (1228)
.+.+.++| +|||..+...... .-...-.|.+||+.|.+++.++.++ ..-...+.....++++. ++.++|++
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~---rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~sp----DG~~l~v~ 142 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIA---KGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTP----NNADLLFF 142 (373)
T ss_pred CeEECCCCCEEEEEeccccccc---cCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECC----CCCEEEEE
Confidence 77788777 6999986432110 0012345889999999999999986 22111123345788873 57899999
Q ss_pred cCC-CCeEEEEEcCCCeEEEE
Q psy11781 550 DVF-RYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 550 Ds~-~~gLIVyDl~~g~swRv 569 (1228)
... ...|.|+| ++++.-+.
T Consensus 143 n~~~~~~v~viD-~t~~~~~~ 162 (373)
T 2mad_H 143 QFAAGPAVGLVV-QGGSSDDQ 162 (373)
T ss_pred ecCCCCeEEEEE-CCCCEEeE
Confidence 865 57899999 99877554
No 126
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.17 E-value=0.072 Score=65.26 Aligned_cols=205 Identities=13% Similarity=0.154 Sum_probs=122.2
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCC--------------CeEEEEECCCCeEE
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR--------------YGLIVYDFFKNTSY 1017 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~--------------~gLIVydl~~g~sw 1017 (1228)
.+-++|..|.+++.++..+.+ ...++++. ++.+||+|.... ..+.|+|..+...
T Consensus 176 ~vtvID~~t~~v~~qI~Vgg~-------pd~~~~sp----dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~- 243 (595)
T 1fwx_A 176 VFTAVDADKWEVAWQVLVSGN-------LDNCDADY----EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK- 243 (595)
T ss_dssp EEEEEETTTTEEEEEEEESSC-------CCCEEECS----SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH-
T ss_pred eEEEEECCCCeEEEEEEeCCC-------ccceEECC----CCCEEEEEecCcccCcchhhccccccceEEEeeccceeE-
Confidence 577889999999998888542 33445543 478999998664 4588888665432
Q ss_pred EeecCCcCcCCCcceeEEcCEEEEeeCCcc--ceecCccccccccCCCccccccccccccCcccc-ceecCCCceEEEEe
Q psy11781 1018 RLTHPYMYPEPTQSTYILDNLKFRWVDGIF--GMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRYMYFHS 1094 (1228)
Q Consensus 1018 Rv~h~s~~pdP~~~~~~i~G~~f~~~dGi~--GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d-i~ls~d~r~LYf~p 1094 (1228)
+.++-.. ..+++..+- |+-- +-. .-.+.+- +...- +.+||||+++|-.-
T Consensus 244 ------~v~~Gk~--~~i~~V~VI--D~~~~~~~~-------------~~~~Ipv-----g~~PhGv~~sPDGk~v~V~~ 295 (595)
T 1fwx_A 244 ------AIAAGDY--QELNGVKVV--DGRKEASSL-------------FTRYIPI-----ANNPHGCNMAPDKKHLCVAG 295 (595)
T ss_dssp ------HHHHTCS--EEETTEEEE--ECSGGGCCS-------------SEEEEEE-----ESSCCCEEECTTSSEEEEEC
T ss_pred ------eccCCCe--eEECcEEEE--eCcccCCce-------------eEEEEec-----CCCceEEEEcCCCCEEEEeC
Confidence 1111111 123443221 2111 100 0001100 01112 78999999999999
Q ss_pred CCCCceEEEecchhc---CCcccCCc-cccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCc---c
Q psy11781 1095 LSSNRHYYVSTTDLR---NSSRYVNS-SDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKV---Y 1167 (1228)
Q Consensus 1095 lss~~ly~V~T~~Lr---~~~~~~~~-~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~---~ 1167 (1228)
+.+.++..++++-++ +..+ .. ......++ +|.. +-++++|.+|++|.++.-.+.|.+||.+ +. |
T Consensus 296 ~~s~~VsVid~~~~~~~~~~~l--~~~~~v~~~v~-vG~g-----P~h~aF~~dG~aY~t~~ldsqV~kwdi~-~a~~~~ 366 (595)
T 1fwx_A 296 KLSPTVTVLDVTRFDAVFYENA--DPRSAVVAEPE-LGLG-----PLHTAFDGRGNAYTSLFLDSQVVKWNIE-DAIRAY 366 (595)
T ss_dssp TTSSBEEEEEGGGHHHHHHSCC--CGGGGEEECCB-CCSC-----EEEEEECTTSEEEEEETTTTEEEEEEHH-HHHHHH
T ss_pred CCCCeEEEEECccccccccccc--CcccceEEEcC-CCCC-----cceEEECCCCeEEEEEecCCcEEEEEhh-Hhhhhh
Confidence 999999999998653 2222 11 11122222 3432 5689999999999999999999999987 31 2
Q ss_pred ccCC-eeEEEecCC-----ceecCCceEEeCCCcEEEEeCCchh
Q psy11781 1168 LPQT-QDIVQTSRD-----ILNFPNDLKIDPNDNIWILSNKLHQ 1205 (1228)
Q Consensus 1168 ~~~n-~~~v~~~~~-----~L~wPd~l~id~dg~Lyvlsn~l~~ 1205 (1228)
..+. ..++.+-+. .+.+.-|+.+.+||.-.+.+|++.+
T Consensus 367 ~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~sk 410 (595)
T 1fwx_A 367 AGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSK 410 (595)
T ss_dssp HTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCT
T ss_pred cccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCc
Confidence 1111 223332222 1556678888899966666777763
No 127
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.09 E-value=0.019 Score=70.35 Aligned_cols=223 Identities=12% Similarity=0.142 Sum_probs=129.2
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCC--------------CeEEEEEcCCCeE
Q psy11781 501 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR--------------YGLIVYDFFKNTS 566 (1228)
Q Consensus 501 PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~--------------~gLIVyDl~~g~s 566 (1228)
-.+-++|..|.+++.++..+.+ +..++++. ++.+||+|.... ..+.|+|+.+.+.
T Consensus 175 ~~vtvID~~t~~v~~qI~Vgg~-------pd~~~~sp----dGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 175 NVFTAVDADKWEVAWQVLVSGN-------LDNCDADY----EGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp EEEEEEETTTTEEEEEEEESSC-------CCCEEECS----SSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred ceEEEEECCCCeEEEEEEeCCC-------ccceEECC----CCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 3588899999999988887542 44556652 578999998664 5588888765432
Q ss_pred EEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCcccc--ccccccccCcccc-ccccCCCceEEEe
Q psy11781 567 YRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYY--HYNVHHYNGTNVD-KTIRDDQRYMYFH 643 (1228)
Q Consensus 567 wRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~--~~~~~~~~~~~~~-i~is~d~r~LYf~ 643 (1228)
+.++-.. ..+++..+- |+.- ++...| ..++ +...- +.++|||+++|-.
T Consensus 244 -------~v~~Gk~--~~i~~V~VI--D~~~--------------~~~~~~~~~Ipv----g~~PhGv~~sPDGk~v~V~ 294 (595)
T 1fwx_A 244 -------AIAAGDY--QELNGVKVV--DGRK--------------EASSLFTRYIPI----ANNPHGCNMAPDKKHLCVA 294 (595)
T ss_dssp -------HHHHTCS--EEETTEEEE--ECSG--------------GGCCSSEEEEEE----ESSCCCEEECTTSSEEEEE
T ss_pred -------eccCCCe--eEECcEEEE--eCcc--------------cCCceeEEEEec----CCCceEEEEcCCCCEEEEe
Confidence 0111000 112222111 1110 000000 0000 00111 6788999999999
Q ss_pred eCCCCceEEEechhhc---CCCCCCCcc-ccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCc---
Q psy11781 644 SLSSNRHYYVSTTDLR---NSSRYVNSS-DIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKV--- 716 (1228)
Q Consensus 644 ~lss~~ly~V~T~~Lr---~~~~~~~~~-~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~--- 716 (1228)
-+.+.++..++++-++ +..+ ... .+...+ .+|. .+-++++|.+|++|.+.-..+.|.+||.+ +.
T Consensus 295 ~~~s~~VsVid~~~~~~~~~~~l--~~~~~v~~~v-~vG~-----gP~h~aF~~dG~aY~t~~ldsqV~kwdi~-~a~~~ 365 (595)
T 1fwx_A 295 GKLSPTVTVLDVTRFDAVFYENA--DPRSAVVAEP-ELGL-----GPLHTAFDGRGNAYTSLFLDSQVVKWNIE-DAIRA 365 (595)
T ss_dssp CTTSSBEEEEEGGGHHHHHHSCC--CGGGGEEECC-BCCS-----CEEEEEECTTSEEEEEETTTTEEEEEEHH-HHHHH
T ss_pred CCCCCeEEEEECccccccccccc--CcccceEEEc-CCCC-----CcceEEECCCCeEEEEEecCCcEEEEEhh-Hhhhh
Confidence 9999999999988653 3333 111 111222 2332 36899999999999999999999999987 31
Q ss_pred cCCCC-eeEEEecC-----CceecCCceEEcCCCcEEEEecCcc--ccccCCCCCccccEEEEEE
Q psy11781 717 YLPQT-QDIVQTSR-----DILNFPNDLKIDPNDNIWILSNKLH--QYLYGFLDFNVYNYRILVA 773 (1228)
Q Consensus 717 ~~~~n-~~iV~~~d-----~~L~wPd~l~Id~dg~LyVlsnrl~--~~~~~~~d~~e~nfrI~r~ 773 (1228)
|..+. ..+|..-+ .-+.+.-|+.+.+||.-.+.+|++. +|+.=+ ...--|..++.+
T Consensus 366 ~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~g-p~~~~~~ql~di 429 (595)
T 1fwx_A 366 YAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVG-PLKPENDQLIDI 429 (595)
T ss_dssp HHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCC-SSCCEEEEEEEC
T ss_pred hcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCC-CCCCCcceEEEc
Confidence 21111 12332111 2256778888899997667778885 365321 223335566554
No 128
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=96.06 E-value=0.75 Score=56.10 Aligned_cols=211 Identities=14% Similarity=0.161 Sum_probs=117.2
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecC-CcCcCCCc
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHP-YMYPEPTQ 1030 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~-s~~pdP~~ 1030 (1228)
+|.++|..+.+-.+.-.++. +.++.++.+| +++.|+|+++.....|.|+|+++++.-....- .-.|.|..
T Consensus 321 ~v~~vd~~~~~~~~v~~i~~-----~~~~~d~~~~----pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~ 391 (567)
T 1qks_A 321 KILLVDYTDLNNLKTTEISA-----ERFLHDGGLD----GSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGR 391 (567)
T ss_dssp EEEEEETTCSSEEEEEEEEC-----CSSEEEEEEC----TTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTT
T ss_pred eEEEEecCCCccceeeeeec-----cccccCceEC----CCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCcc
Confidence 56666666554333333322 3567777776 46889999999999999999999986554333 33455543
Q ss_pred c-eeEE-cCEEEEeeC--CccceecCccccccccCCCcccccc-ccccccCcc-ccceecCCCceEEEEe-CC-----CC
Q psy11781 1031 S-TYIL-DNLKFRWVD--GIFGMAISPELSGKYKRHPYEYYHY-NVHHYNGTN-VDKTIRDDQRYMYFHS-LS-----SN 1098 (1228)
Q Consensus 1031 ~-~~~i-~G~~f~~~d--Gi~GiaLsp~~~~~~~~~p~~~~~~-~~~~~~~~~-~di~ls~d~r~LYf~p-ls-----s~ 1098 (1228)
+ .|.- +|.++-... |--.+++-...+ .+||...... -.+...+.+ +-|..+|++++||-.. |. +.
T Consensus 392 g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~---~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 392 GANFVHPTFGPVWATSHMGDDSVALIGTDP---EGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp CEEEEETTTEEEEEEEBSSSSEEEEEECCT---TTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ceeeECCCCCcEEEeCCCCCCeEEEecCCC---CCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 3 2322 234331111 111233322111 2455443322 111222333 2278999999999965 44 33
Q ss_pred ceEEEecchhcCCcccCCccccccceEEe--------ccccCCCCcccEEEcCCC-cEEEEec----CCCeEEEEeCCCC
Q psy11781 1099 RHYYVSTTDLRNSSRYVNSSDIDEYFHYL--------GSRFRNTQASASAINSNG-VMFYNLV----TKHSVGCWNTKTK 1165 (1228)
Q Consensus 1099 ~ly~V~T~~Lr~~~~~~~~~~~~~~v~~l--------G~rg~~sqs~g~~~D~~G-~LY~t~~----~~~aI~~wn~~~~ 1165 (1228)
.+..++++-|.-... ...++.+ ++.| .....+.++++| .||++.- ..++|..+|.+|.
T Consensus 469 ~v~v~d~~~~~~~g~-------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~ 539 (567)
T 1qks_A 469 SVAVFDIKAMTGDGS-------DPEFKTLPIAEWAGITEGQ--PRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTL 539 (567)
T ss_dssp CEEEEEGGGCCCSSS-------CCCEEEECHHHHHTCCSSC--CEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTT
T ss_pred eEEEEECCccccccc-------CCCcEEeccccccccCCCC--cceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCc
Confidence 677777665521000 0112222 1212 125678899888 7898865 3799999999843
Q ss_pred ccccCCeeEEEecCCceecCCceE
Q psy11781 1166 VYLPQTQDIVQTSRDILNFPNDLK 1189 (1228)
Q Consensus 1166 ~~~~~n~~~v~~~~~~L~wPd~l~ 1189 (1228)
+.. . +.. +.+|.=|+|..
T Consensus 540 ~~~----~-~i~-~~~~~~P~g~f 557 (567)
T 1qks_A 540 ELK----H-VIK-DERLVTPTGKF 557 (567)
T ss_dssp EEE----E-EEC-CTTCCSEEEEE
T ss_pred eEE----E-EeC-CCcccCCCeee
Confidence 321 2 222 45787787744
No 129
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.90 E-value=0.28 Score=56.48 Aligned_cols=63 Identities=11% Similarity=0.112 Sum_probs=41.9
Q ss_pred ccccceEEc-cCCcEEEEcCCCCeEEEEeCCC-CccCCCCeeEEEe-cCCcee-cCCceEEc--CC--CcEEEEe
Q psy11781 684 TQASASAIN-SNGVMFYNLVTKHSVGCWNTKT-KVYLPQTQDIVQT-SRDILN-FPNDLKID--PN--DNIWILS 750 (1228)
Q Consensus 684 ~qs~G~a~D-~~G~LY~t~~~~~aI~~wn~~~-~~~~~~n~~iV~~-~d~~L~-wPd~l~Id--~d--g~LyVls 750 (1228)
+|+.|+++| ++|.||+++-. .+|++++.+- +.. .-.+|+. ..+.|. -+.||+|. .+ |+|++.+
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~---~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGS---NGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCS---CCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred CCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCC---CceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 689999999 79999999887 5699999430 211 1234432 234454 78899995 33 3565555
No 130
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=95.72 E-value=0.2 Score=56.27 Aligned_cols=106 Identities=10% Similarity=0.155 Sum_probs=56.8
Q ss_pred cccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeec-cc-cccccccceEEccCC-cEEEEcCCCCeEE
Q psy11781 632 TIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLG-SR-FRNTQASASAINSNG-VMFYNLVTKHSVG 708 (1228)
Q Consensus 632 ~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG-~~-g~~~qs~G~a~D~~G-~LY~t~~~~~aI~ 708 (1228)
+++|||++||........++..+.+. .+.+ ..+..+. .. | ..+.+++++.+| .||++....+.|.
T Consensus 151 ~~spdG~~l~~~~~~~~~v~~~~~~~--~g~~--------~~~~~~~~~~~g--~~p~~~~~spdg~~l~v~~~~~~~v~ 218 (365)
T 1jof_A 151 VFDPTETYLYSADLTANKLWTHRKLA--SGEV--------ELVGSVDAPDPG--DHPRWVAMHPTGNYLYALMEAGNRIC 218 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECT--TSCE--------EEEEEEECSSTT--CCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred EECCCCCEEEEEcCCCCEEEEEEECC--CCCE--------EEeeeEecCCCC--CCCCEeEECCCCCEEEEEECCCCeEE
Confidence 33457889998877665665554321 1221 0111111 11 2 236788999888 6788877778888
Q ss_pred EEeCC--CCccCCCCeeEEEecCCce---e-------cCCceE-EcCCCc-EEEEe
Q psy11781 709 CWNTK--TKVYLPQTQDIVQTSRDIL---N-------FPNDLK-IDPNDN-IWILS 750 (1228)
Q Consensus 709 ~wn~~--~~~~~~~n~~iV~~~d~~L---~-------wPd~l~-Id~dg~-LyVls 750 (1228)
.|+.+ ++.+.. ....+..-+..+ . +|.+++ +++||. ||+..
T Consensus 219 v~~~~~~~g~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 219 EYVIDPATHMPVY-THHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp EEEECTTTCCEEE-EEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred EEEEeCCCCcEEE-ccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 87643 122210 011122111111 1 688899 999995 66543
No 131
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=95.66 E-value=0.45 Score=58.03 Aligned_cols=192 Identities=10% Similarity=0.026 Sum_probs=108.7
Q ss_pred EeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCC
Q psy11781 925 VDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRY 1004 (1228)
Q Consensus 925 iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~ 1004 (1228)
.|..++++|...+.- .|.+||+.|++++.++..... ...+++.. ++.++|++.. ..
T Consensus 163 ~d~~~~~~V~~~~~~------------~V~viD~~t~~v~~~i~~g~~-------p~~v~~Sp----DGr~lyv~~~-dg 218 (567)
T 1qks_A 163 WDLENLFSVTLRDAG------------QIALIDGSTYEIKTVLDTGYA-------VHISRLSA----SGRYLFVIGR-DG 218 (567)
T ss_dssp CCGGGEEEEEETTTT------------EEEEEETTTCCEEEEEECSSC-------EEEEEECT----TSCEEEEEET-TS
T ss_pred cCCCceEEEEeCCCC------------eEEEEECCCCeEEEEEeCCCC-------ccceEECC----CCCEEEEEcC-CC
Confidence 344567777765543 799999999999998887442 23455542 4789999974 56
Q ss_pred eEEEEECC--CCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccce
Q psy11781 1005 GLIVYDFF--KNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKT 1082 (1228)
Q Consensus 1005 gLIVydl~--~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ 1082 (1228)
.|.+||+. +++.-+ .+.+.. +..+|++++...
T Consensus 219 ~V~viD~~~~t~~~v~-------------~i~~G~-------~P~~ia~s~~~~-------------------------- 252 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVA-------------EIKIGS-------EARSIETSKMEG-------------------------- 252 (567)
T ss_dssp EEEEEETTSSSCCEEE-------------EEECCS-------EEEEEEECCSTT--------------------------
T ss_pred eEEEEECCCCCCcEeE-------------EEecCC-------CCceeEEccccC--------------------------
Confidence 89999995 442221 111111 112334431000
Q ss_pred ecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEecccc------CCCCcccEEEcCC-CcEEEEecCCC
Q psy11781 1083 IRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRF------RNTQASASAINSN-GVMFYNLVTKH 1155 (1228)
Q Consensus 1083 ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg------~~sqs~g~~~D~~-G~LY~t~~~~~ 1155 (1228)
|||++||.....+..+..++++-|+- ...+...|... +.....++..... ..++++.-+.+
T Consensus 253 --pDGk~l~v~n~~~~~v~ViD~~t~~~----------~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g 320 (567)
T 1qks_A 253 --WEDKYAIAGAYWPPQYVIMDGETLEP----------KKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 320 (567)
T ss_dssp --CTTTEEEEEEEETTEEEEEETTTCCE----------EEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTT
T ss_pred --CCCCEEEEEEccCCeEEEEECCCCcE----------EEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCC
Confidence 48999999888877777776533321 11122111100 0001234444433 45666676788
Q ss_pred eEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCc-EEEEeCCch
Q psy11781 1156 SVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWILSNKLH 1204 (1228)
Q Consensus 1156 aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~-Lyvlsn~l~ 1204 (1228)
.|..+|.. .. ++..+..... =.||.++.++++|. +|+.++.-+
T Consensus 321 ~v~~vd~~-~~---~~~~v~~i~~--~~~~~d~~~~pdgr~~~va~~~sn 364 (567)
T 1qks_A 321 KILLVDYT-DL---NNLKTTEISA--ERFLHDGGLDGSHRYFITAANARN 364 (567)
T ss_dssp EEEEEETT-CS---SEEEEEEEEC--CSSEEEEEECTTSCEEEEEEGGGT
T ss_pred eEEEEecC-CC---ccceeeeeec--cccccCceECCCCCEEEEEeCCCC
Confidence 99999986 21 2333222212 24778889999885 566554433
No 132
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.22 E-value=1.3 Score=50.90 Aligned_cols=63 Identities=11% Similarity=0.115 Sum_probs=41.6
Q ss_pred CCcccEEEc-CCCcEEEEecCCCeEEEEeCCC-CccccCCeeEEEec-CCcee-cCCceEEe--CC--CcEEEEe
Q psy11781 1134 TQASASAIN-SNGVMFYNLVTKHSVGCWNTKT-KVYLPQTQDIVQTS-RDILN-FPNDLKID--PN--DNIWILS 1200 (1228)
Q Consensus 1134 sqs~g~~~D-~~G~LY~t~~~~~aI~~wn~~~-~~~~~~n~~~v~~~-~~~L~-wPd~l~id--~d--g~Lyvls 1200 (1228)
+|+.|+++| ++|.||+++-. .+|++++.+. +.. ...+|..- ...|. =+.||+|. .+ |+|++.+
T Consensus 180 sq~EgcvvDd~~g~Lyv~eEd-~GIw~~da~p~~~~---~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSs 250 (355)
T 3amr_A 180 SQTEGMAADDEYGRLYIAEED-EAIWKFSAEPDGGS---NGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASS 250 (355)
T ss_dssp SCEEEEEEETTTTEEEEEETT-TEEEEEECSTTSCS---CCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEE
T ss_pred CCcceEEEcCCCCeEEEeccc-ceEEEEeCCcCCCC---CceEEEEecCCccccCcceEEEEecCCCCEEEEEEc
Confidence 589999999 78999999887 6699999540 211 12334331 23454 78899995 33 3555555
No 133
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=94.22 E-value=1.6 Score=48.86 Aligned_cols=77 Identities=12% Similarity=0.065 Sum_probs=53.7
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCcccCcCccCCCEEEEEECC-CCcEEE--EEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 469 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIR--KYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 469 sV~~v~iD~~gR-LWVLDtG~~~~~~~~~~~~~PKLvvfDL~-td~vi~--~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
.+..+.++++|+ |++.|.|. -+|.+||+. ++++.. .+.+|. .+.....++++. ++.
T Consensus 146 ~~~~~~~spdG~~l~~~~~~~------------~~v~~~~~~~~g~~~~~~~~~~~~----~g~~p~~~~~sp----dg~ 205 (365)
T 1jof_A 146 GIHGMVFDPTETYLYSADLTA------------NKLWTHRKLASGEVELVGSVDAPD----PGDHPRWVAMHP----TGN 205 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTT------------TEEEEEEECTTSCEEEEEEEECSS----TTCCEEEEEECT----TSS
T ss_pred cceEEEECCCCCEEEEEcCCC------------CEEEEEEECCCCCEEEeeeEecCC----CCCCCCEeEECC----CCC
Confidence 467788899885 78888764 248999998 787643 233321 134567788862 456
Q ss_pred EEEEecCCCCeEEEEEcC--CCe
Q psy11781 545 FAYVNDVFRYGLIVYDFF--KNT 565 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~--~g~ 565 (1228)
++|+++.....+.||++. +|+
T Consensus 206 ~l~v~~~~~~~v~v~~~~~~~g~ 228 (365)
T 1jof_A 206 YLYALMEAGNRICEYVIDPATHM 228 (365)
T ss_dssp EEEEEETTTTEEEEEEECTTTCC
T ss_pred EEEEEECCCCeEEEEEEeCCCCc
Confidence 999999877888888765 554
No 134
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.93 E-value=0.18 Score=58.21 Aligned_cols=70 Identities=9% Similarity=-0.179 Sum_probs=53.4
Q ss_pred CcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC-------
Q psy11781 929 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV------- 1001 (1228)
Q Consensus 929 grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~------- 1001 (1228)
.|+||.+.+.-.. .. .|.++|+.|++++++++.+.. + .+++.. ++.++|+++.
T Consensus 32 ~~~yV~~~~~~~~-------~d-~vsvID~~t~~v~~~i~vG~~---P-----~i~~sp----Dg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAG-------TT-ENWVSCAGCGVTLGHSLGAFL---S-----LAVAGH----SGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCS-------SE-EEEEEETTTTEEEEEEEECTT---C-----EEEECT----TSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCc-------cc-eEEEEECCCCeEEEEEeCCCC---C-----ceEECC----CCCEEEEEccccccccc
Confidence 5899999975422 11 799999999999999998643 1 356652 4789999985
Q ss_pred --CCCeEEEEECCCCeEEE
Q psy11781 1002 --FRYGLIVYDFFKNTSYR 1018 (1228)
Q Consensus 1002 --~~~gLIVydl~~g~swR 1018 (1228)
....|-|+|+.+++--+
T Consensus 92 G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp SSEEEEEEEECTTTCCEEE
T ss_pred CCCCCEEEEEECCCCCEEE
Confidence 24679999999988655
No 135
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.84 E-value=4.5 Score=43.65 Aligned_cols=197 Identities=10% Similarity=0.077 Sum_probs=103.2
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEE
Q psy11781 468 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 547 (1228)
Q Consensus 468 vsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aY 547 (1228)
-.|..+...+++++-+. |..+ -.|.+||+.+++.++++.-. ...+..+.+.. ++.+++
T Consensus 33 ~~v~~~~~s~~~~~l~~--~~~d----------g~i~vwd~~~~~~~~~~~~h------~~~v~~~~~~~----~~~~l~ 90 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFS--CSKD----------SSASVWYSLNGERLGTLDGH------TGTIWSIDVDC----FTKYCV 90 (369)
T ss_dssp SCEEEEEECTTSCEEEE--EESS----------SCEEEEETTTCCEEEEECCC------SSCEEEEEECT----TSSEEE
T ss_pred ceEEEEEEcCCCCEEEE--EeCC----------CEEEEEeCCCchhhhhhhhc------CCcEEEEEEcC----CCCEEE
Confidence 34667777777765443 1111 23899999999998766432 23456666641 334454
Q ss_pred EecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCc
Q psy11781 548 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 627 (1228)
Q Consensus 548 ItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1228)
.+. ..+.|.+||+.+++..+.... ...+..++++|
T Consensus 91 s~~-~dg~i~iwd~~~~~~~~~~~~--------------------~~~v~~~~~~~------------------------ 125 (369)
T 3zwl_B 91 TGS-ADYSIKLWDVSNGQCVATWKS--------------------PVPVKRVEFSP------------------------ 125 (369)
T ss_dssp EEE-TTTEEEEEETTTCCEEEEEEC--------------------SSCEEEEEECT------------------------
T ss_pred EEe-CCCeEEEEECCCCcEEEEeec--------------------CCCeEEEEEcc------------------------
Confidence 443 456899999998876554320 11233455554
Q ss_pred cccccccCCCceEEEeeCC------CCceEEEechhhcCCCCCCCccccccce-EeeccccccccccceEEccCCcEEEE
Q psy11781 628 NVDKTIRDDQRYMYFHSLS------SNRHYYVSTTDLRNSSRYVNSSDIDEYF-HYLGSRFRNTQASASAINSNGVMFYN 700 (1228)
Q Consensus 628 ~~~i~is~d~r~LYf~~ls------s~~ly~V~T~~Lr~~~~~~~~~~~~~~v-~~lG~~g~~~qs~G~a~D~~G~LY~t 700 (1228)
+++.|....-. .-.+|.+.+......- . ......+ ...+..+ ......++++.+|.++++
T Consensus 126 --------~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~---~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 126 --------CGNYFLAILDNVMKNPGSINIYEIERDSATHEL---T-KVSEEPIHKIITHEG-LDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp --------TSSEEEEEECCBTTBCCEEEEEEEEECTTTCCE---E-EECSSCSEEEECCTT-CCCEEEEEECGGGCEEEE
T ss_pred --------CCCEEEEecCCccCCCCEEEEEEecCCccceee---c-ccccceeeeccCCcC-ccceeEEEEcCCCCEEEE
Confidence 34444444332 2224444432211100 0 0001111 1222221 114567788888888888
Q ss_pred cCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 701 LVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 701 ~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
-...+.|..||.. ... .....+.... .....+++.++|.+.+..
T Consensus 193 ~~~dg~i~i~d~~-~~~--~~~~~~~~~~---~~v~~~~~~~~~~~l~~~ 236 (369)
T 3zwl_B 193 GHKDGKISKYDVS-NNY--EYVDSIDLHE---KSISDMQFSPDLTYFITS 236 (369)
T ss_dssp EETTSEEEEEETT-TTT--EEEEEEECCS---SCEEEEEECTTSSEEEEE
T ss_pred EcCCCEEEEEECC-CCc--EeEEEEecCC---CceeEEEECCCCCEEEEe
Confidence 7888999999998 321 1112222111 234567777777644433
No 136
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=93.77 E-value=0.18 Score=58.39 Aligned_cols=70 Identities=9% Similarity=-0.193 Sum_probs=52.7
Q ss_pred CcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecC-------
Q psy11781 479 DRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV------- 551 (1228)
Q Consensus 479 gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs------- 551 (1228)
.|+||.+.+.-.. .. .|.++|+.|+++++++..+.. - .+++.. ++.++|+++.
T Consensus 32 ~~~yV~~~~~~~~-------~d-~vsvID~~t~~v~~~i~vG~~-------P-~i~~sp----Dg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAG-------TT-ENWVSCAGCGVTLGHSLGAFL-------S-LAVAGH----SGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCS-------SE-EEEEEETTTTEEEEEEEECTT-------C-EEEECT----TSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCc-------cc-eEEEEECCCCeEEEEEeCCCC-------C-ceEECC----CCCEEEEEccccccccc
Confidence 5899999975321 11 699999999999999888542 2 467752 5789999985
Q ss_pred --CCCeEEEEEcCCCeEEE
Q psy11781 552 --FRYGLIVYDFFKNTSYR 568 (1228)
Q Consensus 552 --~~~gLIVyDl~~g~swR 568 (1228)
....|-|+|+.+++.-+
T Consensus 92 G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp SSEEEEEEEECTTTCCEEE
T ss_pred CCCCCEEEEEECCCCCEEE
Confidence 24679999999987654
No 137
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=93.70 E-value=5.4 Score=43.03 Aligned_cols=79 Identities=9% Similarity=0.040 Sum_probs=49.6
Q ss_pred eEEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEE
Q psy11781 918 ISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 918 vSV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
..|..+....+|++-+. |..+ -.|.+||+.+++.++++.-.. ..+..+.+.. ++.+++
T Consensus 33 ~~v~~~~~s~~~~~l~~--~~~d----------g~i~vwd~~~~~~~~~~~~h~------~~v~~~~~~~----~~~~l~ 90 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFS--CSKD----------SSASVWYSLNGERLGTLDGHT------GTIWSIDVDC----FTKYCV 90 (369)
T ss_dssp SCEEEEEECTTSCEEEE--EESS----------SCEEEEETTTCCEEEEECCCS------SCEEEEEECT----TSSEEE
T ss_pred ceEEEEEEcCCCCEEEE--EeCC----------CEEEEEeCCCchhhhhhhhcC------CcEEEEEEcC----CCCEEE
Confidence 34666777777765443 1111 168999999999988765322 3455566542 244554
Q ss_pred EEcCCCCeEEEEECCCCeEEEe
Q psy11781 998 VNDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~swRv 1019 (1228)
.+. ..+.|.+||+.+++..+.
T Consensus 91 s~~-~dg~i~iwd~~~~~~~~~ 111 (369)
T 3zwl_B 91 TGS-ADYSIKLWDVSNGQCVAT 111 (369)
T ss_dssp EEE-TTTEEEEEETTTCCEEEE
T ss_pred EEe-CCCeEEEEECCCCcEEEE
Confidence 443 356899999998876554
No 138
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.59 E-value=8.5 Score=40.94 Aligned_cols=161 Identities=14% Similarity=0.133 Sum_probs=89.3
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcc
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQS 1031 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~ 1031 (1228)
.|.+||+++++.++++.-.. ..+..+.+.. ++.+++.+. ..+.|.+||+.+++..+...
T Consensus 164 ~v~~~d~~~~~~~~~~~~~~------~~i~~~~~~~----~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~---------- 222 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGHT------DGASCIDISN----DGTKLWTGG-LDNTVRSWDLREGRQLQQHD---------- 222 (337)
T ss_dssp CEEEEETTTTEEEEEECCCS------SCEEEEEECT----TSSEEEEEE-TTSEEEEEETTTTEEEEEEE----------
T ss_pred cEEEEeCCCCceeeeeeccc------CceEEEEECC----CCCEEEEEe-cCCcEEEEECCCCceEeeec----------
Confidence 58899999999887664322 3355555542 234555544 35689999999886554321
Q ss_pred eeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCC
Q psy11781 1032 TYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNS 1111 (1228)
Q Consensus 1032 ~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~ 1111 (1228)
....+..+++ +|+++.|+.....+. ++..+. +..
T Consensus 223 ----------~~~~v~~~~~--------------------------------s~~~~~l~~~~~~~~-i~~~~~---~~~ 256 (337)
T 1gxr_A 223 ----------FTSQIFSLGY--------------------------------CPTGEWLAVGMESSN-VEVLHV---NKP 256 (337)
T ss_dssp ----------CSSCEEEEEE--------------------------------CTTSSEEEEEETTSC-EEEEET---TSS
T ss_pred ----------CCCceEEEEE--------------------------------CCCCCEEEEEcCCCc-EEEEEC---CCC
Confidence 0112223333 345666666554432 433332 111
Q ss_pred cccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEe
Q psy11781 1112 SRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKID 1191 (1228)
Q Consensus 1112 ~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id 1191 (1228)
. ..+..+.. .....++++.+|.++++--....|..|+..++.. ...... -..+..+.+.
T Consensus 257 ~----------~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~----~~~~~~----~~~v~~~~~s 315 (337)
T 1gxr_A 257 D----------KYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGAS----IFQSKE----SSSVLSCDIS 315 (337)
T ss_dssp C----------EEEECCCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCE----EEEEEC----SSCEEEEEEC
T ss_pred C----------eEEEcCCc---cceeEEEECCCCCEEEEecCCCcEEEEECCCCeE----EEEecC----CCcEEEEEEC
Confidence 1 11222222 2356788888998888888889999999873221 111111 1234567777
Q ss_pred CCCcEEEEe
Q psy11781 1192 PNDNIWILS 1200 (1228)
Q Consensus 1192 ~dg~Lyvls 1200 (1228)
++|.+.+..
T Consensus 316 ~~~~~l~~~ 324 (337)
T 1gxr_A 316 VDDKYIVTG 324 (337)
T ss_dssp TTSCEEEEE
T ss_pred CCCCEEEEe
Confidence 777644433
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=92.42 E-value=5.9 Score=41.00 Aligned_cols=81 Identities=6% Similarity=-0.070 Sum_probs=50.4
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCC-CcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKT-NTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~t-d~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
|..+...++|++.+... ..+|.+||+.+ ++..+....+ ....+..+.+... ....++.
T Consensus 44 v~~~~~spdg~~l~~~~-------------~~~i~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~spd---g~~l~~~ 102 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNS-------------EGLLYRLSLAGDPSPEKVDTGF-----ATICNNDHGISPD---GALYAIS 102 (297)
T ss_dssp CEEEEECTTSSEEEEEE-------------TTEEEEEESSSCCSCEECCCTT-----CCCBCSCCEECTT---SSEEEEE
T ss_pred eEeeEECCCCCEEEEEc-------------CCeEEEEeCCCCCCceEecccc-----ccccccceEECCC---CCEEEEE
Confidence 55667778888666631 12799999999 8776432221 1234455666421 3445666
Q ss_pred EcC--CCCeEEEEECCCCeEEEeec
Q psy11781 999 NDV--FRYGLIVYDFFKNTSYRLTH 1021 (1228)
Q Consensus 999 tD~--~~~gLIVydl~~g~swRv~h 1021 (1228)
... +...|.++|+.+++..++.+
T Consensus 103 ~~~~~~~~~l~~~~~~~~~~~~~~~ 127 (297)
T 2ojh_A 103 DKVEFGKSAIYLLPSTGGTPRLMTK 127 (297)
T ss_dssp ECTTTSSCEEEEEETTCCCCEECCS
T ss_pred EeCCCCcceEEEEECCCCceEEeec
Confidence 622 46789999999888777653
No 140
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.10 E-value=14 Score=39.22 Aligned_cols=159 Identities=14% Similarity=0.151 Sum_probs=89.1
Q ss_pred EEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcc
Q psy11781 503 IMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQST 582 (1228)
Q Consensus 503 LvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~ 582 (1228)
|.+||+++++.++++.-. ...+..+.+.. ++.+++.+. ..+.|.+||+.+++.-+...
T Consensus 165 v~~~d~~~~~~~~~~~~~------~~~i~~~~~~~----~~~~l~~~~-~dg~i~~~d~~~~~~~~~~~----------- 222 (337)
T 1gxr_A 165 IAVWDLHNQTLVRQFQGH------TDGASCIDISN----DGTKLWTGG-LDNTVRSWDLREGRQLQQHD----------- 222 (337)
T ss_dssp EEEEETTTTEEEEEECCC------SSCEEEEEECT----TSSEEEEEE-TTSEEEEEETTTTEEEEEEE-----------
T ss_pred EEEEeCCCCceeeeeecc------cCceEEEEECC----CCCEEEEEe-cCCcEEEEECCCCceEeeec-----------
Confidence 889999999988766432 23455666642 234555444 45689999999886554321
Q ss_pred eEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcCCC
Q psy11781 583 YILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSS 662 (1228)
Q Consensus 583 ~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~ 662 (1228)
....+..++++| +++.|+.....+ .++-.+. +...
T Consensus 223 ---------~~~~v~~~~~s~--------------------------------~~~~l~~~~~~~-~i~~~~~---~~~~ 257 (337)
T 1gxr_A 223 ---------FTSQIFSLGYCP--------------------------------TGEWLAVGMESS-NVEVLHV---NKPD 257 (337)
T ss_dssp ---------CSSCEEEEEECT--------------------------------TSSEEEEEETTS-CEEEEET---TSSC
T ss_pred ---------CCCceEEEEECC--------------------------------CCCEEEEEcCCC-cEEEEEC---CCCC
Confidence 112234455554 455666555443 2333332 1111
Q ss_pred CCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcC
Q psy11781 663 RYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDP 742 (1228)
Q Consensus 663 ~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~ 742 (1228)
..+..+.. +....++++.+|.++++-...+.|..|+..++. ...... .. ..+..+.+.+
T Consensus 258 ----------~~~~~~~~---~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~----~~~~~~-~~---~~v~~~~~s~ 316 (337)
T 1gxr_A 258 ----------KYQLHLHE---SCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA----SIFQSK-ES---SSVLSCDISV 316 (337)
T ss_dssp ----------EEEECCCS---SCEEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEE-CS---SCEEEEEECT
T ss_pred ----------eEEEcCCc---cceeEEEECCCCCEEEEecCCCcEEEEECCCCe----EEEEec-CC---CcEEEEEECC
Confidence 11222222 235677888888888888888999999987221 111111 11 2345677777
Q ss_pred CCcEEEE
Q psy11781 743 NDNIWIL 749 (1228)
Q Consensus 743 dg~LyVl 749 (1228)
+|.+.+.
T Consensus 317 ~~~~l~~ 323 (337)
T 1gxr_A 317 DDKYIVT 323 (337)
T ss_dssp TSCEEEE
T ss_pred CCCEEEE
Confidence 7764443
No 141
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=91.70 E-value=5.1 Score=45.98 Aligned_cols=96 Identities=8% Similarity=0.018 Sum_probs=49.7
Q ss_pred CCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccC---CcEEEEcCCCCeEEEEeC
Q psy11781 636 DQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSN---GVMFYNLVTKHSVGCWNT 712 (1228)
Q Consensus 636 d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~---G~LY~t~~~~~aI~~wn~ 712 (1228)
+++.|+.....+ .++.++.. +... . ..... ...|..+ ....+++..+ |.++++--....|..||.
T Consensus 160 ~~~~l~~~~~~g-~v~~~~~~---~~~~--~-~~~~~--~~~~h~~---~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~ 227 (450)
T 2vdu_B 160 DDTTVIIADKFG-DVYSIDIN---SIPE--E-KFTQE--PILGHVS---MLTDVHLIKDSDGHQFIITSDRDEHIKISHY 227 (450)
T ss_dssp TSSEEEEEETTS-EEEEEETT---SCCC--S-SCCCC--CSEECSS---CEEEEEEEECTTSCEEEEEEETTSCEEEEEE
T ss_pred CCCEEEEEeCCC-cEEEEecC---Cccc--c-cccce--eeecccC---ceEEEEEcCCCCCCcEEEEEcCCCcEEEEEC
Confidence 667787776544 46666642 2111 0 00000 1112222 3456677777 877777777789999998
Q ss_pred CCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 713 KTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 713 ~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
.++. .+..+.. ..-.++..+++. +|.+.+..
T Consensus 228 ~~~~----~~~~~~~--~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 228 PQCF----IVDKWLF--GHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCTT----CEEEECC--CCSSCEEEEEEC-STTEEEEE
T ss_pred CCCc----eeeeeec--CCCCceEEEEEC-CCCEEEEE
Confidence 7221 1122111 111345677777 77654443
No 142
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=91.07 E-value=15 Score=41.12 Aligned_cols=73 Identities=10% Similarity=0.033 Sum_probs=45.8
Q ss_pred EEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC
Q psy11781 922 RMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV 1001 (1228)
Q Consensus 922 ~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~ 1001 (1228)
.+..-++|++-++=+|..+ -.|-+||+++++.+..+.-.. -+.++.+.. +..-.|..+|
T Consensus 138 ~v~fSpDg~~la~as~~~d----------~~i~iwd~~~~~~~~~~~~~~-------~V~~v~fsp---dg~~l~s~s~- 196 (365)
T 4h5i_A 138 LVYISREGTVAAIASSKVP----------AIMRIIDPSDLTEKFEIETRG-------EVKDLHFST---DGKVVAYITG- 196 (365)
T ss_dssp EEEECTTSSCEEEEESCSS----------CEEEEEETTTTEEEEEEECSS-------CCCEEEECT---TSSEEEEECS-
T ss_pred EEEEcCCCCEEEEEECCCC----------CEEEEeECCCCcEEEEeCCCC-------ceEEEEEcc---CCceEEeccc-
Confidence 3456677777666565543 268899999999988765322 245555531 1333444443
Q ss_pred CCCeEEEEECCCCeEE
Q psy11781 1002 FRYGLIVYDFFKNTSY 1017 (1228)
Q Consensus 1002 ~~~gLIVydl~~g~sw 1017 (1228)
.++++++..+++.-
T Consensus 197 --~~~~~~~~~~~~~~ 210 (365)
T 4h5i_A 197 --SSLEVISTVTGSCI 210 (365)
T ss_dssp --SCEEEEETTTCCEE
T ss_pred --eeEEEEEeccCcce
Confidence 47888888887654
No 143
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=91.01 E-value=10 Score=43.49 Aligned_cols=158 Identities=14% Similarity=0.145 Sum_probs=86.2
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCe-EEEEecC-CCCeEEEEEcCCCeEEEEcCCCCCcCC
Q psy11781 501 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV-FAYVNDV-FRYGLIVYDFFKNTSYRLTHPYMYPEP 578 (1228)
Q Consensus 501 PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~-~aYItDs-~~~gLIVyDl~~g~swRv~~~s~~pdP 578 (1228)
+.|.+||+++++..+....+ .....+++. + ++. .||.... +...|.+||+.+++..++... +
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-------~~~~~~~~s--p--dg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~-----~ 266 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-------RHNGAPAFS--P--DGSKLAFALSKTGSLNLYVMDLASGQIRQVTDG-----R 266 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-------SCEEEEEEC--T--TSSEEEEEECTTSSCEEEEEETTTCCEEECCCC-----S
T ss_pred cEEEEEECCCCcEEEeecCC-------CcccCEEEc--C--CCCEEEEEEecCCCceEEEEECCCCCEEeCcCC-----C
Confidence 67999999999876422221 224455554 2 333 4545432 346699999999887665421 0
Q ss_pred CCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCC--CceEEEech
Q psy11781 579 TQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSS--NRHYYVSTT 656 (1228)
Q Consensus 579 ~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss--~~ly~V~T~ 656 (1228)
..+..++.+| |+++|+|..-.. ..+|.++.+
T Consensus 267 ---------------~~~~~~~~sp--------------------------------dg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 267 ---------------SNNTEPTWFP--------------------------------DSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp ---------------SCEEEEEECT--------------------------------TSSEEEEEECTTSSCEEEEEETT
T ss_pred ---------------CcccceEECC--------------------------------CCCEEEEEECCCCCcEEEEEECC
Confidence 0112344444 678888877432 257766532
Q ss_pred hhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCC--CCeEEEEeCCCCccCCCCeeEEEecCCcee
Q psy11781 657 DLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVT--KHSVGCWNTKTKVYLPQTQDIVQTSRDILN 733 (1228)
Q Consensus 657 ~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~--~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~ 733 (1228)
... .+.+-..+ .....++.+.+|. |+++... ...|..||..++. ...+. .. .
T Consensus 300 ---~~~-----------~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~-----~~~l~-~~-~-- 354 (415)
T 2hqs_A 300 ---GGA-----------PQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG-----VQVLS-ST-F-- 354 (415)
T ss_dssp ---SSC-----------CEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCC-----EEECC-CS-S--
T ss_pred ---CCC-----------EEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCC-----EEEec-CC-C--
Confidence 111 01111111 1234567777775 5555443 4689999998322 22332 11 1
Q ss_pred cCCceEEcCCCcE
Q psy11781 734 FPNDLKIDPNDNI 746 (1228)
Q Consensus 734 wPd~l~Id~dg~L 746 (1228)
....+++.++|..
T Consensus 355 ~~~~~~~spdg~~ 367 (415)
T 2hqs_A 355 LDETPSLAPNGTM 367 (415)
T ss_dssp SCEEEEECTTSSE
T ss_pred CcCCeEEcCCCCE
Confidence 5667888888863
No 144
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=90.50 E-value=14 Score=38.05 Aligned_cols=58 Identities=14% Similarity=0.153 Sum_probs=38.7
Q ss_pred CCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCC-CeEEEEc
Q psy11781 500 PPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFK-NTSYRLT 570 (1228)
Q Consensus 500 ~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~-g~swRv~ 570 (1228)
..+|.+||+.++++.+.... ...+..+++.. ++.+++.+. ...|.+||+.+ ++..++.
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~-------~~~v~~~~~sp----dg~~l~~~~--~~~i~~~d~~~~~~~~~~~ 79 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQT-------PELFEAPNWSP----DGKYLLLNS--EGLLYRLSLAGDPSPEKVD 79 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEE-------SSCCEEEEECT----TSSEEEEEE--TTEEEEEESSSCCSCEECC
T ss_pred ceeEEEEeCCCCceeeeccC-------CcceEeeEECC----CCCEEEEEc--CCeEEEEeCCCCCCceEec
Confidence 36799999999887754443 23355666652 334444443 45899999999 8877765
No 145
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=90.39 E-value=16 Score=40.98 Aligned_cols=57 Identities=9% Similarity=0.086 Sum_probs=38.1
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEe-cCCceecCCceEEcCCCcEEEE
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQT-SRDILNFPNDLKIDPNDNIWIL 749 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~-~d~~L~wPd~l~Id~dg~LyVl 749 (1228)
-..+++..+|.+..+-...+.|..||..++ ..+.. -..--.+..++++.+||.+.+.
T Consensus 272 V~~~~~Spdg~~lasgs~D~~V~iwd~~~~-------~~~~~~~~gH~~~V~~v~fSpdg~~laS 329 (365)
T 4h5i_A 272 ITSMDVDMKGELAVLASNDNSIALVKLKDL-------SMSKIFKQAHSFAITEVTISPDSTYVAS 329 (365)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEETTTT-------EEEEEETTSSSSCEEEEEECTTSCEEEE
T ss_pred eEeEEECCCCCceEEEcCCCEEEEEECCCC-------cEEEEecCcccCCEEEEEECCCCCEEEE
Confidence 356778899999888888899999999732 22221 1111234678889899875443
No 146
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.32 E-value=5.7 Score=45.58 Aligned_cols=71 Identities=8% Similarity=0.053 Sum_probs=39.9
Q ss_pred ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCC---CcEEEEecCCCeE
Q psy11781 1081 KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSN---GVMFYNLVTKHSV 1157 (1228)
Q Consensus 1081 i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~---G~LY~t~~~~~aI 1157 (1228)
++.+|+++.|+.....+ .++.++..-..... .... ...|..+ ....+++..+ |.++++--....|
T Consensus 155 ~~~sp~~~~l~~~~~~g-~v~~~~~~~~~~~~------~~~~--~~~~h~~---~v~~~~~sp~~~~~~~l~s~~~d~~i 222 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKFG-DVYSIDINSIPEEK------FTQE--PILGHVS---MLTDVHLIKDSDGHQFIITSDRDEHI 222 (450)
T ss_dssp EEECTTSSEEEEEETTS-EEEEEETTSCCCSS------CCCC--CSEECSS---CEEEEEEEECTTSCEEEEEEETTSCE
T ss_pred EEEcCCCCEEEEEeCCC-cEEEEecCCccccc------ccce--eeecccC---ceEEEEEcCCCCCCcEEEEEcCCCcE
Confidence 34455788888776544 36776642221110 0000 1122222 3456777777 8777776677889
Q ss_pred EEEeCC
Q psy11781 1158 GCWNTK 1163 (1228)
Q Consensus 1158 ~~wn~~ 1163 (1228)
..||..
T Consensus 223 ~vwd~~ 228 (450)
T 2vdu_B 223 KISHYP 228 (450)
T ss_dssp EEEEES
T ss_pred EEEECC
Confidence 999987
No 147
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=90.08 E-value=26 Score=38.76 Aligned_cols=67 Identities=6% Similarity=0.013 Sum_probs=42.3
Q ss_pred eEEEEEccCCcEEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeCCcceEEEEEccCCc-eeeeec
Q psy11781 62 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-SYRLTH 131 (1228)
Q Consensus 62 kl~~~dl~t~~~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~~~~g~iv~dl~~~~-swR~~h 131 (1228)
+|.++|++|+++++++.++.........-..+.-- -...++..|+... ...|+.+|..+|+ -|++..
T Consensus 64 ~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~v~~~-~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 64 LVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG--VTVSGGHVYIGSE-KAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE--EEEETTEEEEEET-TSEEEEEETTTCCEEEEEEC
T ss_pred eEEEEEccCCceeeeecCccccccccccCcccccC--ceEeCCEEEEEcC-CCEEEEEECCCCCEEEEEeC
Confidence 89999999999999999976432111100111111 1124667788754 3579999999886 588844
No 148
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=89.96 E-value=24 Score=40.37 Aligned_cols=59 Identities=12% Similarity=0.103 Sum_probs=35.9
Q ss_pred CEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcC-CCCeEEEEECCCCeEEEe
Q psy11781 951 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV-FRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 951 pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~-~~~gLIVydl~~g~swRv 1019 (1228)
+.|.+||+++++..+....+ .....+++.. + ....||.+.. +...|.+||+++++..++
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~-------~~~~~~~~sp--d-g~~la~~~~~~g~~~i~~~d~~~~~~~~l 262 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFP-------RHNGAPAFSP--D-GSKLAFALSKTGSLNLYVMDLASGQIRQV 262 (415)
T ss_dssp CEEEEEETTTCCEEEEECCS-------SCEEEEEECT--T-SSEEEEEECTTSSCEEEEEETTTCCEEEC
T ss_pred cEEEEEECCCCcEEEeecCC-------CcccCEEEcC--C-CCEEEEEEecCCCceEEEEECCCCCEEeC
Confidence 58999999999876422221 1234444431 1 2334555543 346799999999887654
No 149
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=89.94 E-value=10 Score=41.21 Aligned_cols=202 Identities=8% Similarity=-0.008 Sum_probs=104.0
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++++.+.=.. .-+|.+||+.+++....+.+.. ....+..+.+.. ++.+++.
T Consensus 54 ~v~~~~~~~~~~~l~~~~~------------dg~i~vwd~~~~~~~~~~~~~~----~~~~v~~~~~~~----~~~~l~~ 113 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTCGT------------DRNAYVWTLKGRTWKPTLVILR----INRAARCVRWAP----NEKKFAV 113 (372)
T ss_dssp CEEEEEEETTTTEEEEEET------------TSCEEEEEEETTEEEEEEECCC----CSSCEEEEEECT----TSSEEEE
T ss_pred cccEEEEeCCCCEEEEEcC------------CCeEEEEECCCCeeeeeEEeec----CCCceeEEEECC----CCCEEEE
Confidence 4666777777765543111 1238999999998777766533 234456666652 3445555
Q ss_pred ecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
+. ..+.|.+||+.+++.+.+......+. ...+..|+++|
T Consensus 114 ~~-~d~~v~i~d~~~~~~~~~~~~~~~~~---------------~~~i~~~~~~~------------------------- 152 (372)
T 1k8k_C 114 GS-GSRVISICYFEQENDWWVCKHIKKPI---------------RSTVLSLDWHP------------------------- 152 (372)
T ss_dssp EE-TTSSEEEEEEETTTTEEEEEEECTTC---------------CSCEEEEEECT-------------------------
T ss_pred Ee-CCCEEEEEEecCCCcceeeeeeeccc---------------CCCeeEEEEcC-------------------------
Confidence 54 34678899998877544331100000 12244555554
Q ss_pred ccccccCCCceEEEeeCCCC-ceEEEechhhcCCCCCCCc---cccccceEee-ccccccccccceEEccCCcEEEEcCC
Q psy11781 629 VDKTIRDDQRYMYFHSLSSN-RHYYVSTTDLRNSSRYVNS---SDIDEYFHYL-GSRFRNTQASASAINSNGVMFYNLVT 703 (1228)
Q Consensus 629 ~~i~is~d~r~LYf~~lss~-~ly~V~T~~Lr~~~~~~~~---~~~~~~v~~l-G~~g~~~qs~G~a~D~~G~LY~t~~~ 703 (1228)
+++.|......+. ++|.+.+..+......... ......+..+ +.. +....++++.+|.++++-..
T Consensus 153 -------~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~l~~~~~ 222 (372)
T 1k8k_C 153 -------NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSC---GWVHGVCFSANGSRVAWVSH 222 (372)
T ss_dssp -------TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCS---SCEEEEEECSSSSEEEEEET
T ss_pred -------CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCC---CeEEEEEECCCCCEEEEEeC
Confidence 4455555443332 2444332222211100000 0011222222 222 23567888888888888888
Q ss_pred CCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEE
Q psy11781 704 KHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWI 748 (1228)
Q Consensus 704 ~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyV 748 (1228)
.+.|..||..++ +.+..+.... .....+++.++|.+.+
T Consensus 223 d~~i~i~d~~~~----~~~~~~~~~~---~~v~~~~~~~~~~~l~ 260 (372)
T 1k8k_C 223 DSTVCLADADKK----MAVATLASET---LPLLAVTFITESSLVA 260 (372)
T ss_dssp TTEEEEEEGGGT----TEEEEEECSS---CCEEEEEEEETTEEEE
T ss_pred CCEEEEEECCCC----ceeEEEccCC---CCeEEEEEecCCCEEE
Confidence 899999999722 1122222111 1234667777776443
No 150
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.29 E-value=11 Score=41.45 Aligned_cols=60 Identities=12% Similarity=0.049 Sum_probs=34.1
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC----CCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF----RYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~----~~gLIVyDl~~g~swRv~ 570 (1228)
.|+++|+.++++.....- ...+..+.+.. ..++..||+++.. ...|.++|..+++..++.
T Consensus 169 ~l~~~d~~~g~~~~l~~~-------~~~~~~~~~sp--~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQE-------NQWLGHPIYRP--YDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVK 232 (388)
T ss_dssp EEEEEETTTCCEEEEEEE-------SSCEEEEEEET--TEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESC
T ss_pred eEEEEECCCCceEEeecC-------CccccccEECC--CCCCEEEEEEecCCCCCcceEEEEeCCCCceEEee
Confidence 466666666665432211 12345566642 0134567888643 457888888877666554
No 151
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=88.91 E-value=16 Score=39.61 Aligned_cols=80 Identities=10% Similarity=-0.006 Sum_probs=49.7
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+....++++.+.= ..+ -+|.+||+.+++....+.+... ...+..+.+.. ++.+++.
T Consensus 54 ~v~~~~~~~~~~~l~~~--~~d----------g~i~vwd~~~~~~~~~~~~~~~----~~~v~~~~~~~----~~~~l~~ 113 (372)
T 1k8k_C 54 QVTGVDWAPDSNRIVTC--GTD----------RNAYVWTLKGRTWKPTLVILRI----NRAARCVRWAP----NEKKFAV 113 (372)
T ss_dssp CEEEEEEETTTTEEEEE--ETT----------SCEEEEEEETTEEEEEEECCCC----SSCEEEEEECT----TSSEEEE
T ss_pred cccEEEEeCCCCEEEEE--cCC----------CeEEEEECCCCeeeeeEEeecC----CCceeEEEECC----CCCEEEE
Confidence 45666777777655531 111 2689999999998877776332 23455555542 3445555
Q ss_pred EcCCCCeEEEEECCCCeEEEe
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv 1019 (1228)
+.. .+.|.+||+.+++.+.+
T Consensus 114 ~~~-d~~v~i~d~~~~~~~~~ 133 (372)
T 1k8k_C 114 GSG-SRVISICYFEQENDWWV 133 (372)
T ss_dssp EET-TSSEEEEEEETTTTEEE
T ss_pred EeC-CCEEEEEEecCCCccee
Confidence 543 45788999988775543
No 152
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=88.55 E-value=7.2 Score=46.39 Aligned_cols=116 Identities=12% Similarity=0.076 Sum_probs=54.7
Q ss_pred cccCCCCcccCCCCCCcceEEEEEEEecCCeEEEeecCcccccCCC---ce---ecCC-eEEE-EEc-cCCcEEEEEEcC
Q psy11781 10 LLPYPNWSYFDDSNCNSLISVFRMSVDKCDRLWIMDTGVTNILSSI---QQ---LCPP-KIMV-FDL-KTNTLIRKYILP 80 (1228)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~~lw~ldtg~~~~~~~~---~~---~~~p-kl~~-~dl-~t~~~~~~~~~p 80 (1228)
+.+.|.|+...+-|-..|..+-. -|..-+||.+|+|.+.-+... .+ .-.| +|+. -+. ..+...+-|..+
T Consensus 19 ~~~~~~~~~~~~~DG~~la~~s~--~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 19 LIAVEKYSLQGVVDGDKLLVVGF--SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HHHSCEEEEEEEETTTEEEEEEE--ETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEE
T ss_pred HhccchheeecCCCCCeEEEEEc--cCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEe
Confidence 44567776655444444443321 266668999999987653221 11 0112 4433 233 122322333232
Q ss_pred C----cccccCCcccceEEEEeecCCceEEEEeeCCcceEEEEEccCCceeee
Q psy11781 81 T----AQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 129 (1228)
Q Consensus 81 ~----~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~~~~g~iv~dl~~~~swR~ 129 (1228)
. ... .-......+.-...-.+++.+|++.+.+. +++||+.+++--++
T Consensus 97 ~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l 147 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLREL 147 (582)
T ss_dssp TTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEE
T ss_pred ccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEe
Confidence 2 111 00001111211233447788888776543 44889888765444
No 153
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=87.80 E-value=24 Score=45.85 Aligned_cols=226 Identities=12% Similarity=0.122 Sum_probs=113.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+....+|++-+. |.. .-+|.+||+.+++.++++.-.. ..+..+.+.. + .+..+.+
T Consensus 659 ~v~~~~~s~~~~~l~s--~~~----------d~~v~vwd~~~~~~~~~~~~~~------~~v~~~~~~~--~-~~~~~l~ 717 (1249)
T 3sfz_A 659 EVLCCAFSSDDSYIAT--CSA----------DKKVKIWDSATGKLVHTYDEHS------EQVNCCHFTN--K-SNHLLLA 717 (1249)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCS------SCEEEEEECS--S-SSCCEEE
T ss_pred CEEEEEEecCCCEEEE--EeC----------CCeEEEEECCCCceEEEEcCCC------CcEEEEEEec--C-CCceEEE
Confidence 4566777777765443 211 1279999999999998876533 2344444431 1 2333444
Q ss_pred EcCCCCeEEEEECCCCeEEEee--cC------CcCcCCCcceeEE---cCEEEEee--CCccceecCccccccccCCCcc
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLT--HP------YMYPEPTQSTYIL---DNLKFRWV--DGIFGMAISPELSGKYKRHPYE 1065 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~--h~------s~~pdP~~~~~~i---~G~~f~~~--dGi~GiaLsp~~~~~~~~~p~~ 1065 (1228)
+=+..+.|.|||+.+++..+.. |. .|.|+.. .+.. +|.-..|. .+..-..+.. +..
T Consensus 718 sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~--~l~s~s~dg~v~vwd~~~~~~~~~~~~---------~~~ 786 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDE--LLASCSADGTLRLWDVRSANERKSINV---------KRF 786 (1249)
T ss_dssp EEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTT--EEEEEESSSEEEEEEGGGTEEEEEEEC---------CCC
T ss_pred EEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCC--EEEEEECCCeEEEEeCCCCcccceecc---------ccc
Confidence 5445678999999999876654 32 2344322 1211 23222221 1110000000 000
Q ss_pred cc-ccccccccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcC
Q psy11781 1066 YY-HYNVHHYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINS 1143 (1228)
Q Consensus 1066 ~~-~~~~~~~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~ 1143 (1228)
.. +-.........+. ++.+|+++.+....- ..++..+. .... ....+ ..|.. +....+++..
T Consensus 787 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~--~~v~~~d~---~~~~-------~~~~~-~~~~~---~~v~~~~~sp 850 (1249)
T 3sfz_A 787 FLSSEDPPEDVEVIVKCCSWSADGDKIIVAAK--NKVLLFDI---HTSG-------LLAEI-HTGHH---STIQYCDFSP 850 (1249)
T ss_dssp C--------CCCCCBCCCCBCTTSSEEEEEET--TEEEEEET---TTCC-------EEEEE-ECSSS---SCCCEEEECS
T ss_pred ccccCCccccccceEEEEEECCCCCEEEEEcC--CcEEEEEe---cCCC-------ceeEE-cCCCC---CceEEEEEcC
Confidence 00 0000000111233 788999999888763 33333321 1111 01111 11222 3466788889
Q ss_pred CCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEE
Q psy11781 1144 NGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWIL 1199 (1228)
Q Consensus 1144 ~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvl 1199 (1228)
+|.+.++-.....|..||..++. .+..-...-.+..++++.++|...++
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~-------~~~~~~~h~~~v~~v~~spdg~~l~s 899 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRL-------KVADCRGHLSWVHGVMFSPDGSSFLT 899 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCCCc-------eeeecCCCccceEEEEECCCCCEEEE
Confidence 99999888889999999998321 11111122335556666666654333
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=87.45 E-value=21 Score=43.45 Aligned_cols=88 Identities=10% Similarity=0.015 Sum_probs=48.8
Q ss_pred EEEEEEEeCCCc-EEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCc------ccCC------------Cc
Q psy11781 919 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQ------VFEG------------SL 979 (1228)
Q Consensus 919 SV~~v~iD~~gr-LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~------~~~~------------S~ 979 (1228)
++..+....+|+ |........+ .....|.+||+.+++..+....+... ...+ ..
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~-------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSD-------RNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSC-------TTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEE
T ss_pred CCCCceEecCCCEEEEEeccCCC-------CcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 466677777775 5555431100 01247999999999887766543211 0000 11
Q ss_pred ceeeEEEeecCCCceE-EEEEcCCCCeEEEEECCCC---eEEEee
Q psy11781 980 FSNIVTEVVEDCDHVF-AYVNDVFRYGLIVYDFFKN---TSYRLT 1020 (1228)
Q Consensus 980 l~di~VD~~~~c~~~~-aYItD~~~~gLIVydl~~g---~swRv~ 1020 (1228)
+..+++.. ++.+ |+.++ ..|.+||+.++ +..++.
T Consensus 111 v~~~~~Sp----Dg~~l~~~~~---~~i~~~d~~~~~~~~~~~l~ 148 (741)
T 2ecf_A 111 IVDYQWSP----DAQRLLFPLG---GELYLYDLKQEGKAAVRQLT 148 (741)
T ss_dssp SCCCEECT----TSSEEEEEET---TEEEEEESSSCSTTSCCBCC
T ss_pred cceeEECC----CCCEEEEEeC---CcEEEEECCCCCcceEEEcc
Confidence 33444431 3344 45444 78999999998 665554
No 155
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=86.86 E-value=42 Score=37.12 Aligned_cols=69 Identities=7% Similarity=0.100 Sum_probs=49.6
Q ss_pred CCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeE
Q psy11781 927 KCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGL 1006 (1228)
Q Consensus 927 ~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gL 1006 (1228)
..++|||.... -.|++||++|++++-++.++..+ ....+++ ++.+|+.-. .+.|
T Consensus 102 ~~~~v~v~~~~-------------g~l~a~d~~tG~~~W~~~~~~~~------~~~p~~~------~~~v~v~~~-~g~l 155 (376)
T 3q7m_A 102 SGGHVYIGSEK-------------AQVYALNTSDGTVAWQTKVAGEA------LSRPVVS------DGLVLIHTS-NGQL 155 (376)
T ss_dssp ETTEEEEEETT-------------SEEEEEETTTCCEEEEEECSSCC------CSCCEEE------TTEEEEECT-TSEE
T ss_pred eCCEEEEEcCC-------------CEEEEEECCCCCEEEEEeCCCce------EcCCEEE------CCEEEEEcC-CCeE
Confidence 46899996532 27999999999999999886543 2223443 467888653 4589
Q ss_pred EEEECCCCe-EEEeec
Q psy11781 1007 IVYDFFKNT-SYRLTH 1021 (1228)
Q Consensus 1007 IVydl~~g~-swRv~h 1021 (1228)
+.+|.++|+ .|+...
T Consensus 156 ~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 156 QALNEADGAVKWTVNL 171 (376)
T ss_dssp EEEETTTCCEEEEEEC
T ss_pred EEEECCCCcEEEEEeC
Confidence 999998886 577653
No 156
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=86.53 E-value=14 Score=40.70 Aligned_cols=58 Identities=12% Similarity=0.068 Sum_probs=34.2
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEe-ecCCCceEEEEEcCC----CCeEEEEECCCCeEEEe
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEV-VEDCDHVFAYVNDVF----RYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~-~~~c~~~~aYItD~~----~~gLIVydl~~g~swRv 1019 (1228)
.|+++|++++++.....- ...+..+.+.. . ....||+++.. ...|.++|..+++..++
T Consensus 169 ~l~~~d~~~g~~~~l~~~-------~~~~~~~~~sp~d---g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (388)
T 3pe7_A 169 RLMRVDLKTGESTVILQE-------NQWLGHPIYRPYD---DSTVAFCHEGPHDLVDARMWLINEDGTNMRKV 231 (388)
T ss_dssp EEEEEETTTCCEEEEEEE-------SSCEEEEEEETTE---EEEEEEEECSCTTTSSCSEEEEETTSCCCEES
T ss_pred eEEEEECCCCceEEeecC-------CccccccEECCCC---CCEEEEEEecCCCCCcceEEEEeCCCCceEEe
Confidence 577777777765432221 12345555542 1 34577888743 45788888887766554
No 157
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.75 E-value=31 Score=37.74 Aligned_cols=77 Identities=17% Similarity=0.158 Sum_probs=42.9
Q ss_pred EEEEEEeCCCcEEE-EeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcc---------cCCCcceeeEEEeec
Q psy11781 920 VFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV---------FEGSLFSNIVTEVVE 989 (1228)
Q Consensus 920 V~~v~iD~~grLWV-LDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~---------~~~S~l~di~VD~~~ 989 (1228)
|..+....++++.+ ... + -.|.+||+.+++.++++..+.... ..++....+....
T Consensus 152 v~~~~~~~~~~~l~~~~~---d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 216 (425)
T 1r5m_A 152 IVSVKWNKDGTHIISMDV---E----------NVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVD-- 216 (425)
T ss_dssp EEEEEECTTSSEEEEEET---T----------CCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEE--
T ss_pred EEEEEECCCCCEEEEEec---C----------CeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcC--
Confidence 55666666665433 221 1 258899999999999887755421 0111244444431
Q ss_pred CCCceEEEEEcCCCCeEEEEECCCCe
Q psy11781 990 DCDHVFAYVNDVFRYGLIVYDFFKNT 1015 (1228)
Q Consensus 990 ~c~~~~aYItD~~~~gLIVydl~~g~ 1015 (1228)
++.+ ++=...+.|.+||+.+++
T Consensus 217 ---~~~~-~~~~~~g~i~~~d~~~~~ 238 (425)
T 1r5m_A 217 ---DDKF-VIPGPKGAIFVYQITEKT 238 (425)
T ss_dssp ---TTEE-EEECGGGCEEEEETTCSS
T ss_pred ---CCEE-EEEcCCCeEEEEEcCCCc
Confidence 2333 333345689999998864
No 158
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=85.50 E-value=23 Score=42.94 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=20.1
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEee
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~ 1020 (1228)
+..+|.+| ..|.+||+.+++..++.
T Consensus 93 ~~~~~~~~---~~i~~~d~~~~~~~~l~ 117 (706)
T 2z3z_A 93 GLVVLFTQ---GGLVGFDMLARKVTYLF 117 (706)
T ss_dssp TEEEEEET---TEEEEEETTTTEEEEEE
T ss_pred CeEEEEEC---CEEEEEECCCCceEEcc
Confidence 55666666 78999999999888765
No 159
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=85.02 E-value=54 Score=36.68 Aligned_cols=79 Identities=8% Similarity=0.077 Sum_probs=47.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++++.+. |.. .-.|.+||+++++.+.++..... ...+++. + .++...+
T Consensus 167 ~v~~~~~~p~~~~l~s--~s~----------d~~v~iwd~~~~~~~~~~~~~~~-------v~~~~~~--~--~~~~~l~ 223 (393)
T 1erj_A 167 DIYSLDYFPSGDKLVS--GSG----------DRTVRIWDLRTGQCSLTLSIEDG-------VTTVAVS--P--GDGKYIA 223 (393)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTTEEEEEEECSSC-------EEEEEEC--S--TTCCEEE
T ss_pred CEEEEEEcCCCCEEEE--ecC----------CCcEEEEECCCCeeEEEEEcCCC-------cEEEEEE--C--CCCCEEE
Confidence 3566677666665442 211 13589999999998877765332 3344443 1 1333444
Q ss_pred ecCCCCeEEEEEcCCCeEEEEc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~ 570 (1228)
+-+..+.|.+||+.+++.-+..
T Consensus 224 ~~s~d~~v~iwd~~~~~~~~~~ 245 (393)
T 1erj_A 224 AGSLDRAVRVWDSETGFLVERL 245 (393)
T ss_dssp EEETTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCcEEEEECCCCcEEEee
Confidence 4445678999999998765543
No 160
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=84.48 E-value=33 Score=37.62 Aligned_cols=57 Identities=9% Similarity=0.060 Sum_probs=35.2
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
...+++..+| ++++-...+.|..||..++. .+..+.... .....+++.++|.+.++.
T Consensus 292 i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~---~~i~~~~~s~~~~~l~~~ 348 (425)
T 1r5m_A 292 IVSASWVGDD-KVISCSMDGSVRLWSLKQNT----LLALSIVDG---VPIFAGRISQDGQKYAVA 348 (425)
T ss_dssp EEEEEEETTT-EEEEEETTSEEEEEETTTTE----EEEEEECTT---CCEEEEEECTTSSEEEEE
T ss_pred EEEEEECCCC-EEEEEeCCCcEEEEECCCCc----EeEecccCC---ccEEEEEEcCCCCEEEEE
Confidence 4667777788 77777788899999987221 122222111 234567788888655544
No 161
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=83.98 E-value=23 Score=43.11 Aligned_cols=87 Identities=7% Similarity=-0.014 Sum_probs=49.6
Q ss_pred EEEEEEEecCCe-EEEeecCcccccCCCceecCCeEEEEEccCCcEEEEEEcCCcccccC-------------------C
Q psy11781 29 SVFRMSVDKCDR-LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEG-------------------S 88 (1228)
Q Consensus 29 ~v~~~~~d~~~~-lw~ldtg~~~~~~~~~~~~~pkl~~~dl~t~~~~~~~~~p~~~~~~~-------------------s 88 (1228)
.+.++.+.|+++ |..... + .+. .....|..+|+++++..+........ ..+ .
T Consensus 38 ~~~~~~~SpdG~~la~~~~-~-----d~~-~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 109 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRG-K-----DSD-RNQLDLWSYDIGSGQTRLLVDSKVVL-PGTETLSDEEKARRERQRIAAMT 109 (741)
T ss_dssp CCEEEEECTTSSEEEEEEC-C-----SSC-TTEEEEEEEETTTCCEEEEECGGGTC---------------------CCE
T ss_pred CCCCceEecCCCEEEEEec-c-----CCC-CcccEEEEEECCCCceeEccchhhcc-cccccccchhhhhhhhhhhcccc
Confidence 467788888876 444322 0 000 01347899999999887776554321 000 0
Q ss_pred cccceEEEEeecCCceEEEEeeCCcceEEEEEccCC---ceeee
Q psy11781 89 LFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKN---TSYRL 129 (1228)
Q Consensus 89 ~~~~i~~d~~~~~~~~~aYi~D~~~~g~iv~dl~~~---~swR~ 129 (1228)
.+..+.+ .-.|+-+|+..+ ..|.++|+.++ +.-++
T Consensus 110 ~v~~~~~---SpDg~~l~~~~~---~~i~~~d~~~~~~~~~~~l 147 (741)
T 2ecf_A 110 GIVDYQW---SPDAQRLLFPLG---GELYLYDLKQEGKAAVRQL 147 (741)
T ss_dssp ESCCCEE---CTTSSEEEEEET---TEEEEEESSSCSTTSCCBC
T ss_pred CcceeEE---CCCCCEEEEEeC---CcEEEEECCCCCcceEEEc
Confidence 1122222 233566777766 67899999988 55554
No 162
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=83.56 E-value=26 Score=38.92 Aligned_cols=133 Identities=11% Similarity=0.116 Sum_probs=72.9
Q ss_pred ceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcceeEEcCEEEEeeCCc--cceecCccccccccCCCccccccc
Q psy11781 993 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGI--FGMAISPELSGKYKRHPYEYYHYN 1070 (1228)
Q Consensus 993 ~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~~~~i~G~~f~~~dGi--~GiaLsp~~~~~~~~~p~~~~~~~ 1070 (1228)
+..+|-+|.+.+.|.+.++..+...|+... +....+.-.|..+-|.+.- +.|........ +...
T Consensus 156 g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~----~~~~----- 221 (302)
T 3s25_A 156 DRYFYYNNPKNGQLYRYDTASQSEALFYDC-----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNP----NPVV----- 221 (302)
T ss_dssp TTEEEEECTTTCCEEEEETTTTEEEEEECS-----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSC----CCEE-----
T ss_pred CCEEEEEeCCCceEEEEECCCCCEEEEeCC-----CccceeeecCCEEEEEEcCCCcEEEEEECCCC----CeEE-----
Confidence 567888888889999999998887777421 1111122134444443211 11211110000 0000
Q ss_pred cccccCcccc-ceecCCCceEEEEeCC-CCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEE
Q psy11781 1071 VHHYNGTNVD-KTIRDDQRYMYFHSLS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMF 1148 (1228)
Q Consensus 1071 ~~~~~~~~~d-i~ls~d~r~LYf~pls-s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY 1148 (1228)
-+... ..+++++++|||+.-+ ...|++++. |.+. .+.+-+ + +..++.+ ..+.||
T Consensus 222 -----Lt~~~~~~~~~~g~~Iy~~~~~~~~~i~~~~~----DG~~----------r~~l~~-~---~~~~i~i-~~d~Iy 277 (302)
T 3s25_A 222 -----LTEANIEHYNVYGSLIFYQRGGDNPALCVVKN----DGTG----------FKELAK-G---EFCNINV-TSQYVY 277 (302)
T ss_dssp -----CSCSCEEEEEEETTEEEEEECSSSCEEEEEET----TSCC----------CEEEEE-S---CEEEEEE-CSSEEE
T ss_pred -----EeCCCcceEEECCCEEEEEECCCCcEEEEEEC----CCCc----------cEEeeC-C---ccceEEE-eCCEEE
Confidence 00001 2478899999997443 467888864 2221 111111 1 1223444 568999
Q ss_pred EEecCCCeEEEEeCC
Q psy11781 1149 YNLVTKHSVGCWNTK 1163 (1228)
Q Consensus 1149 ~t~~~~~aI~~wn~~ 1163 (1228)
|++....+|.+-+++
T Consensus 278 ~td~~~~~i~~~~~d 292 (302)
T 3s25_A 278 FTDFVSNKEYCTSTQ 292 (302)
T ss_dssp EEETTTCCEEEEESS
T ss_pred EEECCCCeEEEEECC
Confidence 999998999999887
No 163
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=83.05 E-value=57 Score=35.47 Aligned_cols=58 Identities=10% Similarity=0.109 Sum_probs=36.3
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
+|.+||+.+++...++.-. ......+.+.. ++.++.... ..+.|.+||+.+++.-+.+
T Consensus 145 ~v~i~~~~~~~~~~~~~~~------~~~v~~~~~sp----dg~~lasg~-~dg~i~iwd~~~~~~~~~~ 202 (321)
T 3ow8_A 145 KVNIFGVESGKKEYSLDTR------GKFILSIAYSP----DGKYLASGA-IDGIINIFDIATGKLLHTL 202 (321)
T ss_dssp EEEEEETTTCSEEEEEECS------SSCEEEEEECT----TSSEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred cEEEEEcCCCceeEEecCC------CceEEEEEECC----CCCEEEEEc-CCCeEEEEECCCCcEEEEE
Confidence 4888999998877655442 23455566541 234444333 4567999999998765543
No 164
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.93 E-value=60 Score=36.20 Aligned_cols=156 Identities=6% Similarity=0.041 Sum_probs=88.0
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++++.+.=. .+ -.|.+||+++++.++++.- ....+..+.+.. .+..+++
T Consensus 219 ~v~~~~~~~~~~~l~s~~--~d----------~~v~iwd~~~~~~~~~~~~------~~~~v~~~~~~p----~~~~ll~ 276 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGG--ND----------NVVQIWDARSSIPKFTKTN------HNAAVKAVAWCP----WQSNLLA 276 (401)
T ss_dssp CEEEEEECTTSSEEEEEE--TT----------SCEEEEETTCSSEEEEECC------CSSCCCEEEECT----TSTTEEE
T ss_pred CeeEEEEcCCCCEEEEEe--CC----------CeEEEccCCCCCccEEecC------CcceEEEEEECC----CCCCEEE
Confidence 355666666665544311 11 2389999999988865432 223456666642 2344555
Q ss_pred ecC--CCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccC
Q psy11781 549 NDV--FRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNG 626 (1228)
Q Consensus 549 tDs--~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~ 626 (1228)
+-. ....|.+||+.+++..+.... ...+..++++|
T Consensus 277 ~~~gs~d~~i~i~d~~~~~~~~~~~~--------------------~~~v~~~~~s~----------------------- 313 (401)
T 4aez_A 277 TGGGTMDKQIHFWNAATGARVNTVDA--------------------GSQVTSLIWSP----------------------- 313 (401)
T ss_dssp EECCTTTCEEEEEETTTCCEEEEEEC--------------------SSCEEEEEECS-----------------------
T ss_pred EecCCCCCEEEEEECCCCCEEEEEeC--------------------CCcEEEEEECC-----------------------
Confidence 533 577899999998866553311 11234555655
Q ss_pred ccccccccCCCceEEEeeC---CCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCC
Q psy11781 627 TNVDKTIRDDQRYMYFHSL---SSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVT 703 (1228)
Q Consensus 627 ~~~~i~is~d~r~LYf~~l---ss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~ 703 (1228)
+++.|+...- ..-.+|.+++. . .....+.-+.. +....++++.+|.+.++-..
T Consensus 314 ---------~~~~l~~~~g~~dg~i~v~~~~~~-----~-------~~~~~~~~~h~---~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 314 ---------HSKEIMSTHGFPDNNLSIWSYSSS-----G-------LTKQVDIPAHD---TRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp ---------SSSEEEEEECTTTCEEEEEEEETT-----E-------EEEEEEEECCS---SCCCEEEECTTSSEEEEECT
T ss_pred ---------CCCeEEEEeecCCCcEEEEecCCc-----c-------ceeEEEecCCC---CCEEEEEECCCCCEEEEEeC
Confidence 4455554321 11224443321 1 11111222322 23567888889988888888
Q ss_pred CCeEEEEeCC
Q psy11781 704 KHSVGCWNTK 713 (1228)
Q Consensus 704 ~~aI~~wn~~ 713 (1228)
.+.|..|+..
T Consensus 370 dg~i~iw~~~ 379 (401)
T 4aez_A 370 DENLKFWRVY 379 (401)
T ss_dssp TSEEEEEECC
T ss_pred CCcEEEEECC
Confidence 8999999997
No 165
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=82.37 E-value=39 Score=37.74 Aligned_cols=80 Identities=8% Similarity=0.007 Sum_probs=45.4
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECC-CCcEEEEEECCCC-cccCCCcceeeEEEeecCCCceEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIRKYILPTA-QVFEGSLFSNIVTEVVEDCDHVFAY 997 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~-td~lir~y~~p~~-~~~~~S~l~di~VD~~~~c~~~~aY 997 (1228)
|..+....++++.+. | -+ -+|.+||+. +++.++.+.+... .......+..+..... ...++.
T Consensus 180 v~~~~~~~~~~~l~s--~-~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---~~~~l~ 243 (447)
T 3dw8_B 180 INSISINSDYETYLS--A-DD----------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPN---SCNTFV 243 (447)
T ss_dssp CCEEEECTTSSEEEE--E-CS----------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSS---CTTEEE
T ss_pred eEEEEEcCCCCEEEE--e-CC----------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECCC---CCcEEE
Confidence 344555566665553 3 22 178999999 4567776666432 2222344566666521 112333
Q ss_pred EEcCCCCeEEEEECCCCeE
Q psy11781 998 VNDVFRYGLIVYDFFKNTS 1016 (1228)
Q Consensus 998 ItD~~~~gLIVydl~~g~s 1016 (1228)
.+. ..+.|.+||+.+++.
T Consensus 244 s~~-~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 244 YSS-SKGTIRLCDMRASAL 261 (447)
T ss_dssp EEE-TTSCEEEEETTTCSS
T ss_pred EEe-CCCeEEEEECcCCcc
Confidence 333 345899999998763
No 166
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=82.09 E-value=35 Score=41.27 Aligned_cols=56 Identities=13% Similarity=0.087 Sum_probs=37.0
Q ss_pred CeEEEEEccCCcEEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeCCcceEEEEEccC-----Cceeee
Q psy11781 61 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFK-----NTSYRL 129 (1228)
Q Consensus 61 pkl~~~dl~t~~~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~~~~g~iv~dl~~-----~~swR~ 129 (1228)
-+|.++|+++++..+....+. -+..+.+ .-.|+.+||..| ..|.|+|+.+ ++.-++
T Consensus 101 ~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~---SpdG~~la~~~~---~~i~v~~~~~~~~~~g~~~~~ 161 (706)
T 2z3z_A 101 GGLVGFDMLARKVTYLFDTNE-------ETASLDF---SPVGDRVAYVRN---HNLYIARGGKLGEGMSRAIAV 161 (706)
T ss_dssp TEEEEEETTTTEEEEEECCTT-------CCTTCEE---CTTSSEEEEEET---TEEEEEECBCTTSCCCCCEES
T ss_pred CEEEEEECCCCceEEccCCcc-------cccCCcC---CCCCCEEEEEEC---CeEEEEecCcccccCCCcEEe
Confidence 488999998887654433221 2334433 334778999755 6799999998 776655
No 167
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=81.62 E-value=1e+02 Score=37.25 Aligned_cols=66 Identities=12% Similarity=-0.094 Sum_probs=39.3
Q ss_pred EEEEEECCCCcEEEEEECCCcccc-cCCCceeEEEEeecCCCCe--E-EEEecCCCCeEEEEEcCCCeE-EEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVF-EGSLFSNIVTEVVEDCDHV--F-AYVNDVFRYGLIVYDFFKNTS-YRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~-~~S~l~di~VD~~~~c~~~--~-aYItDs~~~gLIVyDl~~g~s-wRv~ 570 (1228)
.|+++|++|++++-++........ -+..-.-+.+|... ++. . +|+.+ ..+.|.++|.++|+. |++.
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~--~G~~~~~v~~~~-~~G~l~~lD~~tG~~~w~~~ 343 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPV--NGKMTPLLSHID-RNGILYTLNRENGNLIVAEK 343 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEE--TTEEEEEEEEEC-TTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEeccc--CCcEEEEEEEeC-CCcEEEEEECCCCCEEeeec
Confidence 499999999999988887532111 11111223344211 121 3 44554 456899999999974 7664
No 168
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.57 E-value=52 Score=35.93 Aligned_cols=56 Identities=9% Similarity=0.169 Sum_probs=34.8
Q ss_pred cccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEE
Q psy11781 1136 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWI 1198 (1228)
Q Consensus 1136 s~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyv 1198 (1228)
...++++.+|.++++--....|..||..++. ....+.. .. .....+++.++|.+.+
T Consensus 273 v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----~~~~~~~-h~--~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKAD----RAGVLAG-HD--NRVSCLGVTDDGMAVA 328 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTCC----EEEEEEC-CS--SCEEEEEECTTSSCEE
T ss_pred eEEEEECCCCCEEEEECCCCeEEEEEcccCc----EeeEeec-CC--CcEEEEEEcCCCCEEE
Confidence 3456778899999998889999999987222 1222221 11 2334566666665433
No 169
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=81.55 E-value=65 Score=35.08 Aligned_cols=56 Identities=7% Similarity=0.088 Sum_probs=36.8
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEE
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 568 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swR 568 (1228)
.|.+||+.+++.++++.-. ......+.+. .++...++=+..+.|.+||+.+++.-+
T Consensus 165 ~i~~wd~~~~~~~~~~~~h------~~~v~~~~~~-----~~~~~l~sg~~d~~v~~wd~~~~~~~~ 220 (340)
T 1got_B 165 TCALWDIETGQQTTTFTGH------TGDVMSLSLA-----PDTRLFVSGACDASAKLWDVREGMCRQ 220 (340)
T ss_dssp CEEEEETTTTEEEEEECCC------SSCEEEEEEC-----TTSSEEEEEETTSCEEEEETTTCSEEE
T ss_pred cEEEEECCCCcEEEEEcCC------CCceEEEEEC-----CCCCEEEEEeCCCcEEEEECCCCeeEE
Confidence 4889999999988765421 1234555554 233345555567789999999876544
No 170
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=81.19 E-value=92 Score=38.30 Aligned_cols=66 Identities=9% Similarity=0.017 Sum_probs=41.1
Q ss_pred CEEEEEECCCCcEEEEEECCCcccc-----cCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeE-EEEc
Q psy11781 501 PKIMVFDLKTNTLIRKYILPTAQVF-----EGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 570 (1228)
Q Consensus 501 PKLvvfDL~td~vi~~y~~p~~v~~-----~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~s-wRv~ 570 (1228)
..|+++|++|++++-++........ ....+.++.+|-. ....+|+.+ ..+-|.++|..+|+. |++.
T Consensus 270 ~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~---~~~~v~~~~-~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK---PRKVLMQAP-KNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE---EEEEEEECC-TTSEEEEEETTTCCEEEEEE
T ss_pred eeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc---EEEEEEEEC-CCCEEEEEECCCCCEecccc
Confidence 3699999999999999987532211 1123344544300 112566666 456888999998875 4443
No 171
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=80.82 E-value=2.2 Score=46.22 Aligned_cols=106 Identities=13% Similarity=0.135 Sum_probs=58.8
Q ss_pred ceecCCCceEEEEeCCCCceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEE
Q psy11781 1081 KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCW 1160 (1228)
Q Consensus 1081 i~ls~d~r~LYf~plss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~w 1160 (1228)
++.+|+++ ||=- ++.+||+++..--.... ....-+.+|+.|-+ .-..+.+|.+|+||.. ....|+++
T Consensus 46 laf~P~G~-LYaV--~~G~Ly~~~~~t~~~~~-------W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav--~dG~iyr~ 112 (236)
T 1tl2_A 46 LFLSPGGE-LYGV--LNDKIYKGTPPTHDNDN-------WMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV--SKDKLYKA 112 (236)
T ss_dssp EEECTTSC-EEEE--ETTEEEEESCCCSTTCC-------HHHHCEEEECSCGG-GCSEEEECTTSCEEEE--ETTEEEEE
T ss_pred EEECCCcc-EEEE--eCCeEEEECCCCCCccc-------ccccccEecccccc-cceEEEECCCCCEEEe--CCCEEEEe
Confidence 45555444 5544 55556666532111111 11224567765533 3678999999999999 55899999
Q ss_pred eCCC-Cc--cccCCeeEEEecCCceecCCceEEeCCCcEEEEeCC
Q psy11781 1161 NTKT-KV--YLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1161 n~~~-~~--~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
++-+ +. .... -..|.+ -.--.+ .-+.++++|.||.+++.
T Consensus 113 ~pP~~~~~~Wl~~-a~~vg~-~gw~~~-~~lff~p~G~Lyav~dg 154 (236)
T 1tl2_A 113 SPPQSDTDNWIAR-ATEVGS-GGWSGF-KFLFFHPNGYLYAVHGQ 154 (236)
T ss_dssp SCCCSTTCCHHHH-SEEEEC-SSGGGE-EEEEECTTSCEEEEETT
T ss_pred CCCcCCCCceecc-ccEecc-CCCCce-EEEEECCCceEEEEeCC
Confidence 8831 10 0000 022221 000112 56678899999988844
No 172
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=80.45 E-value=32 Score=38.22 Aligned_cols=133 Identities=10% Similarity=0.090 Sum_probs=73.3
Q ss_pred CeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCc--ceeecCcccCCcccCCCccccccc
Q psy11781 543 HVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGI--FGMAISPELSGKYKRHPYEYYHYN 620 (1228)
Q Consensus 543 ~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi--~GIALsp~~~~~~~~~~~~~~~~~ 620 (1228)
+..+|.+|.+.+.|.+.++..+...|+... +....+.-.|..+-|.+.- +-|........ +...+.+
T Consensus 156 g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~-----~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~----~~~~Lt~-- 224 (302)
T 3s25_A 156 DRYFYYNNPKNGQLYRYDTASQSEALFYDC-----NCYKPVVLDDTNVYYMDVNRDNAIVHVNINNP----NPVVLTE-- 224 (302)
T ss_dssp TTEEEEECTTTCCEEEEETTTTEEEEEECS-----CEEEEEEEETTEEEEEEGGGTTEEEEECSSSC----CCEECSC--
T ss_pred CCEEEEEeCCCceEEEEECCCCCEEEEeCC-----CccceeeecCCEEEEEEcCCCcEEEEEECCCC----CeEEEeC--
Confidence 567888888889999999999888887532 1111121133334332211 22222211000 0000000
Q ss_pred cccccCcccc-ccccCCCceEEEeeCC-CCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCcEE
Q psy11781 621 VHHYNGTNVD-KTIRDDQRYMYFHSLS-SNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMF 698 (1228)
Q Consensus 621 ~~~~~~~~~~-i~is~d~r~LYf~~ls-s~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY 698 (1228)
-. ..+++++++|||..-+ ...+++++. |++- . +.+-+ + +..++.+ ..+.||
T Consensus 225 --------~~~~~~~~~g~~Iy~~~~~~~~~i~~~~~----DG~~---r-------~~l~~-~---~~~~i~i-~~d~Iy 277 (302)
T 3s25_A 225 --------ANIEHYNVYGSLIFYQRGGDNPALCVVKN----DGTG---F-------KELAK-G---EFCNINV-TSQYVY 277 (302)
T ss_dssp --------SCEEEEEEETTEEEEEECSSSCEEEEEET----TSCC---C-------EEEEE-S---CEEEEEE-CSSEEE
T ss_pred --------CCcceEEECCCEEEEEECCCCcEEEEEEC----CCCc---c-------EEeeC-C---ccceEEE-eCCEEE
Confidence 01 2478889999998543 456888874 4431 1 11111 1 1123444 667999
Q ss_pred EEcCCCCeEEEEeCC
Q psy11781 699 YNLVTKHSVGCWNTK 713 (1228)
Q Consensus 699 ~t~~~~~aI~~wn~~ 713 (1228)
|++....+|.+-+++
T Consensus 278 ~td~~~~~i~~~~~d 292 (302)
T 3s25_A 278 FTDFVSNKEYCTSTQ 292 (302)
T ss_dssp EEETTTCCEEEEESS
T ss_pred EEECCCCeEEEEECC
Confidence 999999999999887
No 173
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=80.11 E-value=1.2e+02 Score=37.24 Aligned_cols=65 Identities=9% Similarity=0.025 Sum_probs=40.8
Q ss_pred CEEEEEECCCCcEEEEEECCCCccc-----CCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeE-EEe
Q psy11781 951 PKIMVFDLKTNTLIRKYILPTAQVF-----EGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRL 1019 (1228)
Q Consensus 951 pKLvvfDL~td~lir~y~~p~~~~~-----~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~s-wRv 1019 (1228)
..|+++|++|++++-++........ ....+.++.+|=+ ....+|+.+. .+-|.++|.++|+. |++
T Consensus 270 ~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~---~~~~v~~~~~-~G~l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 270 SSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK---PRKVLMQAPK-NGFFYVLDRTNGKLISAE 340 (668)
T ss_dssp TEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE---EEEEEEECCT-TSEEEEEETTTCCEEEEE
T ss_pred eeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc---EEEEEEEECC-CCEEEEEECCCCCEeccc
Confidence 3799999999999999998432211 1123344444310 1125666654 56899999999875 444
No 174
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=79.81 E-value=46 Score=36.80 Aligned_cols=179 Identities=8% Similarity=0.085 Sum_probs=96.8
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++++.+. |.. .-.|.+||+.+++.++++.- ....+..+.+.. ++.+++
T Consensus 141 ~v~~~~~~~~~~~l~s--~s~----------d~~i~iwd~~~~~~~~~~~~------h~~~v~~~~~~~----~~~~l~- 197 (420)
T 3vl1_A 141 EITKLKFFPSGEALIS--SSQ----------DMQLKIWSVKDGSNPRTLIG------HRATVTDIAIID----RGRNVL- 197 (420)
T ss_dssp CEEEEEECTTSSEEEE--EET----------TSEEEEEETTTCCCCEEEEC------CSSCEEEEEEET----TTTEEE-
T ss_pred ccEEEEECCCCCEEEE--EeC----------CCeEEEEeCCCCcCceEEcC------CCCcEEEEEEcC----CCCEEE-
Confidence 4666777777764442 211 13599999999988776542 223466677752 233444
Q ss_pred ecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCcc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTN 628 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1228)
+=+..+.|.+||+.+++..+.......+. .++..+++.+.... .+. ....-.
T Consensus 198 s~~~d~~v~iwd~~~~~~~~~~~~~~~~~----------------~~v~~~~~~~~~~~-------~~~-----~~~~~~ 249 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGTTIHTFNRKENPH----------------DGVNSIALFVGTDR-------QLH-----EISTSK 249 (420)
T ss_dssp EEETTSCEEEEETTTTEEEEEECBTTBTT----------------CCEEEEEEEECCCS-------SCG-----GGCCCC
T ss_pred EEcCCCcEEEeECCCCceeEEeecCCCCC----------------CCccEEEEecCCcc-------eee-----ecccCc
Confidence 33345679999999998777653211111 11223333332110 000 000111
Q ss_pred cc-ccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCCCe
Q psy11781 629 VD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHS 706 (1228)
Q Consensus 629 ~~-i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~~a 706 (1228)
+. ++.+++++.|+.....+. +.-.+. +.... ..+... +.......++.+.+|. ++++--..+.
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~-i~i~d~---~~~~~---------~~~~~~--~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGV-ITVHNV---FSKEQ---------TIQLPS--KFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSC-EEEEET---TTCCE---------EEEECC--TTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ccceEEcCCCCEEEEEcCCCe-EEEEEC---CCCce---------eEEccc--ccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 22 667888988877766553 333332 11110 011111 1112356778888887 7777778899
Q ss_pred EEEEeCC
Q psy11781 707 VGCWNTK 713 (1228)
Q Consensus 707 I~~wn~~ 713 (1228)
|..||..
T Consensus 315 i~vwd~~ 321 (420)
T 3vl1_A 315 LAQWDLR 321 (420)
T ss_dssp EEEEETT
T ss_pred EEEEEcC
Confidence 9999997
No 175
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=79.06 E-value=1e+02 Score=39.70 Aligned_cols=60 Identities=18% Similarity=0.197 Sum_probs=36.7
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCC--------CCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF--------RYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~--------~~gLIVyDl~~g~swRv~ 570 (1228)
.|.+||++++++.+...-. ...+..+++. + +++..|+.+... ...|.+||+.+++..++.
T Consensus 401 ~v~~~d~~tg~~~~~~~~~------~~~v~~~~~S--p-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 401 EIMTVDLETGKPTVIERSR------EAMITDFTIS--D-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEEEEETTTCCEEEEEECS------SSCCCCEEEC--T-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred eEEEEECCCCceEEeccCC------CCCccceEEC--C-CCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 6889999998877654321 1234455554 1 133455655422 357999999999855544
No 176
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.61 E-value=72 Score=34.71 Aligned_cols=59 Identities=7% Similarity=0.015 Sum_probs=31.9
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCC----CeEEEEECCCCeEEEe
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----YGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~----~gLIVydl~~g~swRv 1019 (1228)
+|.++|+.++++.....- ...+..+.+.. +.+...+|+++... ..|.++|+++++..++
T Consensus 169 ~l~~~d~~~g~~~~~~~~-------~~~~~~~~~sp--~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l 231 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQD-------TAWLGHPIYRP--FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI 231 (396)
T ss_dssp EEEEEETTTCCEEEEEEE-------SSCEEEEEEET--TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES
T ss_pred eEEEEECCCCcEEeeccC-------CcccccceECC--CCCCEEEEEecCCCCCCCceEEEEECCCCceeEe
Confidence 566666666665433321 12234444432 01234788887433 5788999877654443
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=78.42 E-value=81 Score=34.30 Aligned_cols=60 Identities=7% Similarity=0.053 Sum_probs=32.1
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCC----CeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFR----YGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~----~gLIVyDl~~g~swRv~ 570 (1228)
+|.++|+.+++...... .......+.+.. +.++..+|+++... ..|.++|+.+++..++.
T Consensus 169 ~l~~~d~~~g~~~~~~~-------~~~~~~~~~~sp--~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~ 232 (396)
T 3c5m_A 169 RLIKVDIETGELEVIHQ-------DTAWLGHPIYRP--FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIK 232 (396)
T ss_dssp EEEEEETTTCCEEEEEE-------ESSCEEEEEEET--TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESS
T ss_pred eEEEEECCCCcEEeecc-------CCcccccceECC--CCCCEEEEEecCCCCCCCceEEEEECCCCceeEee
Confidence 46666666666543221 112244555531 01334788887433 57889998876654443
No 178
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=78.00 E-value=92 Score=34.71 Aligned_cols=77 Identities=8% Similarity=0.089 Sum_probs=45.8
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
|..+....++.+-+. |..+ -.|.+||+++++.+.++..... ...+.+.. .++...++
T Consensus 168 v~~~~~~p~~~~l~s--~s~d----------~~v~iwd~~~~~~~~~~~~~~~-------v~~~~~~~----~~~~~l~~ 224 (393)
T 1erj_A 168 IYSLDYFPSGDKLVS--GSGD----------RTVRIWDLRTGQCSLTLSIEDG-------VTTVAVSP----GDGKYIAA 224 (393)
T ss_dssp EEEEEECTTSSEEEE--EETT----------SEEEEEETTTTEEEEEEECSSC-------EEEEEECS----TTCCEEEE
T ss_pred EEEEEEcCCCCEEEE--ecCC----------CcEEEEECCCCeeEEEEEcCCC-------cEEEEEEC----CCCCEEEE
Confidence 556666666654432 2221 2789999999998887765332 33344431 12323333
Q ss_pred cCCCCeEEEEECCCCeEEEe
Q psy11781 1000 DVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~swRv 1019 (1228)
=+..+.|.+||+.+++.-+.
T Consensus 225 ~s~d~~v~iwd~~~~~~~~~ 244 (393)
T 1erj_A 225 GSLDRAVRVWDSETGFLVER 244 (393)
T ss_dssp EETTSCEEEEETTTCCEEEE
T ss_pred EcCCCcEEEEECCCCcEEEe
Confidence 33456799999998876553
No 179
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=77.95 E-value=92 Score=34.65 Aligned_cols=79 Identities=4% Similarity=-0.075 Sum_probs=47.4
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+....++.+.+. |..+ -.|.+||+++++.++++.-. ...+..+.+.. ++..+.+
T Consensus 219 ~v~~~~~~~~~~~l~s--~~~d----------~~v~iwd~~~~~~~~~~~~~------~~~v~~~~~~p----~~~~ll~ 276 (401)
T 4aez_A 219 EVCGLAWRSDGLQLAS--GGND----------NVVQIWDARSSIPKFTKTNH------NAAVKAVAWCP----WQSNLLA 276 (401)
T ss_dssp CEEEEEECTTSSEEEE--EETT----------SCEEEEETTCSSEEEEECCC------SSCCCEEEECT----TSTTEEE
T ss_pred CeeEEEEcCCCCEEEE--EeCC----------CeEEEccCCCCCccEEecCC------cceEEEEEECC----CCCCEEE
Confidence 3555666666655443 1111 16899999999888755422 23455566542 2334455
Q ss_pred EcC--CCCeEEEEECCCCeEEEe
Q psy11781 999 NDV--FRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 999 tD~--~~~gLIVydl~~g~swRv 1019 (1228)
+-. ..+.|.+||+.+++..+.
T Consensus 277 ~~~gs~d~~i~i~d~~~~~~~~~ 299 (401)
T 4aez_A 277 TGGGTMDKQIHFWNAATGARVNT 299 (401)
T ss_dssp EECCTTTCEEEEEETTTCCEEEE
T ss_pred EecCCCCCEEEEEECCCCCEEEE
Confidence 533 467899999998876553
No 180
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=76.56 E-value=1.3e+02 Score=38.76 Aligned_cols=80 Identities=20% Similarity=0.232 Sum_probs=46.7
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
+..+...++|+.-+.=.. ...|.+||++++++.+...-.. ..+..+++.. +.+..||.+
T Consensus 381 ~~~~~~SpDG~~la~~~~------------~~~v~~~d~~tg~~~~~~~~~~------~~v~~~~~Sp---DG~~la~~~ 439 (1045)
T 1k32_A 381 VFAMGVDRNGKFAVVAND------------RFEIMTVDLETGKPTVIERSRE------AMITDFTISD---NSRFIAYGF 439 (1045)
T ss_dssp EEEEEECTTSSEEEEEET------------TSEEEEEETTTCCEEEEEECSS------SCCCCEEECT---TSCEEEEEE
T ss_pred eeeeEECCCCCEEEEECC------------CCeEEEEECCCCceEEeccCCC------CCccceEECC---CCCeEEEEe
Confidence 455667777764442111 1279999999999876553211 2234455431 133455665
Q ss_pred cCC--------CCeEEEEECCCCeEEEee
Q psy11781 1000 DVF--------RYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 1000 D~~--------~~gLIVydl~~g~swRv~ 1020 (1228)
... ...|.+||+++++..++.
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred cCccccccCCCCCeEEEEECCCCcEEEee
Confidence 422 357999999999855543
No 181
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=76.24 E-value=92 Score=33.80 Aligned_cols=193 Identities=11% Similarity=0.043 Sum_probs=95.6
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEee--cC------C
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT--HP------Y 1023 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~--h~------s 1023 (1228)
.|.+||+.+++.++.+..... ....+.+.. ++.++. +=...+.+.+||+.+++.-... |. .
T Consensus 103 ~i~lWd~~~~~~~~~~~~~~~------~~~~~~~sp----dg~~l~-~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAGPV------DAWTLAFSP----DSQYLA-TGTHVGKVNIFGVESGKKEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEEEETTTTEEEEEEECCTT------CCCCEEECT----TSSEEE-EECTTSEEEEEETTTCSEEEEEECSSSCEEEEE
T ss_pred cEEEEECCCCCEEEEEeCCCc------cEEEEEECC----CCCEEE-EEcCCCcEEEEEcCCCceeEEecCCCceEEEEE
Confidence 799999999999988776432 122344431 223333 3334567889999888765543 21 2
Q ss_pred cCcCCCcceeEE---cCEEEEeeCCccceecCccccccccCCCccccccccccccCcccc-ceecCCCceEEEEeCCCCc
Q psy11781 1024 MYPEPTQSTYIL---DNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRYMYFHSLSSNR 1099 (1228)
Q Consensus 1024 ~~pdP~~~~~~i---~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d-i~ls~d~r~LYf~plss~~ 1099 (1228)
+.|+.. .+.. +|.-..|.- ..|-.+. .+.. | ...+. ++.+|+++.|.-....+.
T Consensus 172 ~spdg~--~lasg~~dg~i~iwd~-~~~~~~~---------------~~~~-h--~~~v~~l~~spd~~~l~s~s~dg~- 229 (321)
T 3ow8_A 172 YSPDGK--YLASGAIDGIINIFDI-ATGKLLH---------------TLEG-H--AMPIRSLTFSPDSQLLVTASDDGY- 229 (321)
T ss_dssp ECTTSS--EEEEEETTSCEEEEET-TTTEEEE---------------EECC-C--SSCCCEEEECTTSCEEEEECTTSC-
T ss_pred ECCCCC--EEEEEcCCCeEEEEEC-CCCcEEE---------------EEcc-c--CCceeEEEEcCCCCEEEEEcCCCe-
Confidence 223221 1111 121111110 0000000 0010 1 11233 788899988776655443
Q ss_pred eEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecC
Q psy11781 1100 HYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSR 1179 (1228)
Q Consensus 1100 ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~ 1179 (1228)
+.--+. +.... .-+..|..+ ....+++.++|.++++--....|..||..++. ....+.. .
T Consensus 230 i~iwd~---~~~~~---------~~~~~~h~~---~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~----~~~~~~~-h 289 (321)
T 3ow8_A 230 IKIYDV---QHANL---------AGTLSGHAS---WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRT----CVHTFFD-H 289 (321)
T ss_dssp EEEEET---TTCCE---------EEEECCCSS---CEEEEEECTTSSEEEEEETTSCEEEEETTTTE----EEEEECC-C
T ss_pred EEEEEC---CCcce---------eEEEcCCCC---ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCE----EEEEEcC-C
Confidence 222221 11110 012222222 34567788889888888888999999997322 1122211 1
Q ss_pred CceecCCceEEeCCCcEEEE
Q psy11781 1180 DILNFPNDLKIDPNDNIWIL 1199 (1228)
Q Consensus 1180 ~~L~wPd~l~id~dg~Lyvl 1199 (1228)
-....++++.++|.+.+.
T Consensus 290 --~~~v~~v~~s~~g~~l~s 307 (321)
T 3ow8_A 290 --QDQVWGVKYNGNGSKIVS 307 (321)
T ss_dssp --SSCEEEEEECTTSSEEEE
T ss_pred --CCcEEEEEECCCCCEEEE
Confidence 123346677777764443
No 182
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=76.11 E-value=8.1 Score=41.91 Aligned_cols=114 Identities=11% Similarity=0.162 Sum_probs=68.1
Q ss_pred CceEEEEecccCeeEEEecccccCCcccC-CccchhhhhhhcCccccccccceeeEcCCCeEEEeccCCCeeEEEeCCCC
Q psy11781 197 QRYMYFHSLSSNRHYYVSTTDLRNSSRYV-NSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTK 275 (1228)
Q Consensus 197 ~~~lYf~~lsS~~~~sV~T~~Lr~~~~~~-~~~~~~~~v~~~G~rg~~sqs~~~~~d~~Gvi~f~~v~~~aI~cwn~~~~ 275 (1228)
-+.|.||| --.||.|+...|-.-+... .+......-..+|+.|-+. =.+...|.+|+||.. ...-|..|++-+.
T Consensus 43 ~~~laf~P--~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 43 FKFLFLSP--GGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp CSEEEECT--TSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ceeEEECC--CccEEEEeCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 45777787 3347777766666544322 1122222345666655432 456677999999999 5589999988653
Q ss_pred cccccccceeeccccee---ecC--cceeeeCCCeEEEEeccccchhcccCCC
Q psy11781 276 VYLPQTQDIVQTSRDIL---NFP--NDLKIDPNDNIWILSNKLHQYLYGFLDF 323 (1228)
Q Consensus 276 ~~~~~~~~~v~~~~~~l---~~p--~~l~i~~~g~lw~~sn~l~~~~~~~l~~ 323 (1228)
- ....+.+ ..++ .|- .-|-++.+|.||+.++.- +++.+.+
T Consensus 118 ~----~~~Wl~~-a~~vg~~gw~~~~~lff~p~G~Lyav~dg~---lyr~~~P 162 (236)
T 1tl2_A 118 D----TDNWIAR-ATEVGSGGWSGFKFLFFHPNGYLYAVHGQQ---FYKALPP 162 (236)
T ss_dssp T----TCCHHHH-SEEEECSSGGGEEEEEECTTSCEEEEETTE---EEEECCC
T ss_pred C----CCceecc-ccEeccCCCCceEEEEECCCceEEEEeCCc---EEecCCC
Confidence 3 4444444 2111 111 345568899999999664 4444444
No 183
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=76.02 E-value=21 Score=38.98 Aligned_cols=63 Identities=14% Similarity=-0.023 Sum_probs=36.3
Q ss_pred cccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 685 QASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 685 qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
.-..++++.+|.++++-...+.|..||..++...+..+..+.... .....+++.++|.+.+..
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~~v~~~~~s~~~~~l~~~ 269 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQ---LPLRSLLWANESAIVAAG 269 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSS---SCEEEEEEEETTEEEEEE
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCC---CceEEEEEcCCCCEEEEE
Confidence 356778888898887777888999999873221000012221111 224467777787654443
No 184
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=76.00 E-value=68 Score=34.86 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=38.6
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
++.+||++++++++.+.++.. ..+..+.+.. . .++...++=+..+.|.+||+.+++..++.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~--~-~~~~~l~s~s~dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSA-----NEIIYMYGHN--E-VNTEYFIWADNRGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCS-----SCEEEEECCC------CCEEEEEETTCCEEEEESSSSCEEEEE
T ss_pred ceEEeecCCcceeEEeecCCC-----CCEEEEEcCC--C-CCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 478889999998888877532 2345555541 0 02223344445678999999998876554
No 185
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.43 E-value=76 Score=35.15 Aligned_cols=81 Identities=9% Similarity=0.033 Sum_probs=47.6
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEe
Q psy11781 470 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 549 (1228)
Q Consensus 470 V~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYIt 549 (1228)
|..+...++++|-. |.-+ -.|.+||+.+++.+....+... .-...+..+.+.. ++.++. +
T Consensus 85 v~~~~~s~d~~l~~---~s~d----------g~v~lWd~~~~~~~~~~~~~~~--~H~~~V~~v~~sp----dg~~l~-s 144 (344)
T 4gqb_B 85 VADLTWVGERGILV---ASDS----------GAVELWELDENETLIVSKFCKY--EHDDIVSTVSVLS----SGTQAV-S 144 (344)
T ss_dssp EEEEEEETTTEEEE---EETT----------SEEEEEEECTTSSCEEEEEEEE--CCSSCEEEEEECT----TSSEEE-E
T ss_pred EEEEEEeCCCeEEE---EECC----------CEEEEEeccCCCceeEeecccc--CCCCCEEEEEECC----CCCEEE-E
Confidence 66677767776543 3221 2488999999886554443110 1123455666641 233443 3
Q ss_pred cCCCCeEEEEEcCCCeEEEEc
Q psy11781 550 DVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 550 Ds~~~gLIVyDl~~g~swRv~ 570 (1228)
=+....|.+||+.+++.-+.+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEE
Confidence 345567999999998776654
No 186
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=74.42 E-value=43 Score=35.60 Aligned_cols=58 Identities=10% Similarity=0.072 Sum_probs=37.3
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
.|.+||+.++++++++.-. ...+..+.+.. ++.++..+ +..+.|.+||+.+++.-+..
T Consensus 196 ~i~i~d~~~~~~~~~~~~h------~~~v~~~~~s~----~~~~l~s~-s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGH------TGYLNTVTVSP----DGSLCASG-GKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CEEEEETTTTEEEEEECCC------SSCEEEEEECT----TSSEEEEE-ETTCEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCceeeEecCC------CCcEEEEEECC----CCCEEEEE-eCCCeEEEEEeccCceeeee
Confidence 4889999999988765432 23456666651 23444443 34568999999987765543
No 187
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=74.33 E-value=1.1e+02 Score=33.83 Aligned_cols=60 Identities=18% Similarity=0.200 Sum_probs=36.1
Q ss_pred ccceEEccCCcEEEEc---CCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 686 ASASAINSNGVMFYNL---VTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~---~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
...++...+|.++++- ...+.|..||.. ..-. ...+.... .-.....++++++|.+.+++
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~-~~~~--~~~~~~~~--~~~~v~~~~~s~~~~~l~~~ 285 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTK-HLEE--PLSLQELD--TSSGVLLPFFDPDTNIVYLC 285 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETT-BCSS--CSEEEECC--CCSSCEEEEEETTTTEEEEE
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCc-cccC--CceEEecc--CCCceeEEEEcCCCCEEEEE
Confidence 4567777888877776 678899999997 3211 11222111 11235567888888654443
No 188
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=74.25 E-value=71 Score=35.39 Aligned_cols=81 Identities=9% Similarity=0.014 Sum_probs=46.7
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
|..+....+++|- +|.-+ -.|-+||+.+++.+....+... .....+..+.+.. ++.++...
T Consensus 85 v~~~~~s~d~~l~---~~s~d----------g~v~lWd~~~~~~~~~~~~~~~--~H~~~V~~v~~sp----dg~~l~sg 145 (344)
T 4gqb_B 85 VADLTWVGERGIL---VASDS----------GAVELWELDENETLIVSKFCKY--EHDDIVSTVSVLS----SGTQAVSG 145 (344)
T ss_dssp EEEEEEETTTEEE---EEETT----------SEEEEEEECTTSSCEEEEEEEE--CCSSCEEEEEECT----TSSEEEEE
T ss_pred EEEEEEeCCCeEE---EEECC----------CEEEEEeccCCCceeEeecccc--CCCCCEEEEEECC----CCCEEEEE
Confidence 5666666666654 33322 1688999999976554443110 0123355555531 23444433
Q ss_pred cCCCCeEEEEECCCCeEEEee
Q psy11781 1000 DVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~swRv~ 1020 (1228)
+..+.|.+||+.+++..+.+
T Consensus 146 -s~d~~i~iwd~~~~~~~~~~ 165 (344)
T 4gqb_B 146 -SKDICIKVWDLAQQVVLSSY 165 (344)
T ss_dssp -ETTSCEEEEETTTTEEEEEE
T ss_pred -eCCCeEEEEECCCCcEEEEE
Confidence 23457999999998876643
No 189
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=72.49 E-value=70 Score=35.09 Aligned_cols=58 Identities=10% Similarity=0.177 Sum_probs=37.0
Q ss_pred ccceEEcc-CCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCC-cEEEEe
Q psy11781 686 ASASAINS-NGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPND-NIWILS 750 (1228)
Q Consensus 686 s~G~a~D~-~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg-~LyVls 750 (1228)
...+++.. +|.++++--..+.|..||..++ +.+..+.... .....+++.+++ .+.+..
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~----~~~~~~~~~~---~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESA----EQLSQFPARG---NWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSC----CEEEEEECSS---SCCCCEEECTTCTTEEEEC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC----ccceeecCCC---CceEEEEECCCCCCEEEEE
Confidence 45677776 7888888888899999998722 1222222111 346678888877 554443
No 190
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=71.74 E-value=1.7e+02 Score=34.86 Aligned_cols=222 Identities=12% Similarity=0.101 Sum_probs=0.0
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcc-------------------------
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQV------------------------- 974 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~------------------------- 974 (1228)
|..+...++|++.+ +|..+. .|.+||+.+++.++++..+....
T Consensus 242 V~~v~~spdg~~l~--s~s~D~----------~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~ 309 (611)
T 1nr0_A 242 VFGLTWSPDGTKIA--SASADK----------TIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 309 (611)
T ss_dssp EEEEEECTTSSEEE--EEETTS----------EEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEE
T ss_pred EEEEEECCCCCEEE--EEeCCC----------eEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEE
Q ss_pred ------------cCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEee---cC------CcCcCCCccee
Q psy11781 975 ------------FEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT---HP------YMYPEPTQSTY 1033 (1228)
Q Consensus 975 ------------~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~---h~------s~~pdP~~~~~ 1033 (1228)
.....+..+++. .++..-++=+..+.|.+||+.+++.-++. |. .+.++......
T Consensus 310 ~~~~~~~~~~~~gh~~~v~~l~~s-----pdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~ 384 (611)
T 1nr0_A 310 NPELGSIDQVRYGHNKAITALSSS-----ADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTV 384 (611)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEC-----TTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEE
T ss_pred eCCCCCcceEEcCCCCCEEEEEEe-----CCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEE
Q ss_pred EEcCEEEEee-----------------CCccceecCccccccccCCCccccccccccccC--------------------
Q psy11781 1034 ILDNLKFRWV-----------------DGIFGMAISPELSGKYKRHPYEYYHYNVHHYNG-------------------- 1076 (1228)
Q Consensus 1034 ~i~G~~f~~~-----------------dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~-------------------- 1076 (1228)
..++.--.|. ....+++++| ++
T Consensus 385 s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~---------------------dg~~~~~~~~~~v~~~~~~~~~ 443 (611)
T 1nr0_A 385 SWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSA---------------------DGDIAVAACYKHIAIYSHGKLT 443 (611)
T ss_dssp ETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECT---------------------TSSCEEEEESSEEEEEETTEEE
T ss_pred EcCCceEEeecCCccccccceeeeecCCCCcEEEEeC---------------------CCcEEEEEeCceEEEEeCCcee
Q ss_pred -----cccc-ceecCCCceEEEEeCCCC-ceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEE
Q psy11781 1077 -----TNVD-KTIRDDQRYMYFHSLSSN-RHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFY 1149 (1228)
Q Consensus 1077 -----~~~d-i~ls~d~r~LYf~plss~-~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~ 1149 (1228)
..+. +++|||+++|.-....+. ++|.+.+..++.... .+..+ ....+++.++|.+.+
T Consensus 444 ~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~-------------~~h~~---~v~~v~fspdg~~la 507 (611)
T 1nr0_A 444 EVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKT-------------IVHPA---EITSVAFSNNGAFLV 507 (611)
T ss_dssp EEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEE-------------EECSS---CEEEEEECTTSSEEE
T ss_pred eeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeec-------------cCCCC---ceEEEEECCCCCEEE
Q ss_pred EecCCCeEEEEeCCCCccccCC-eeEEEe-cCC-ceecCCceEEeCCCcEEEEeCC
Q psy11781 1150 NLVTKHSVGCWNTKTKVYLPQT-QDIVQT-SRD-ILNFPNDLKIDPNDNIWILSNK 1202 (1228)
Q Consensus 1150 t~~~~~aI~~wn~~~~~~~~~n-~~~v~~-~~~-~L~wPd~l~id~dg~Lyvlsn~ 1202 (1228)
+--....|..|+.. + ..++.. .-. --.....+++.++|.+.+..+.
T Consensus 508 s~s~d~~v~~w~~~-------~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~ 556 (611)
T 1nr0_A 508 ATDQSRKVIPYSVA-------NNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSL 556 (611)
T ss_dssp EEETTSCEEEEEGG-------GTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEcCCCCEEEEEcC-------CCCceeeeeeeeecccceeEEEECCCCCEEEEEEC
No 191
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=71.64 E-value=28 Score=37.84 Aligned_cols=140 Identities=11% Similarity=0.214 Sum_probs=77.9
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQS 581 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~ 581 (1228)
.|.+||+++.+....+.- ....+..+.+.. ++.++ ++=+..+.|.+||+.+++.-+....
T Consensus 177 ~i~~wd~~~~~~~~~~~~------h~~~v~~~~~sp----~g~~l-~s~~~dg~i~iwd~~~~~~~~~~~~--------- 236 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIG------HNSNINTLTASP----DGTLI-ASAGKDGEIMLWNLAAKKAMYTLSA--------- 236 (319)
T ss_dssp CEEEEETTTTEEEEEECC------CCSCEEEEEECT----TSSEE-EEEETTCEEEEEETTTTEEEEEEEC---------
T ss_pred EEEEEECCcchhheeecC------CCCcEEEEEEcC----CCCEE-EEEeCCCeEEEEECCCCcEEEEecC---------
Confidence 388899998887754432 223455666641 23333 3333467899999998875543311
Q ss_pred ceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCceEEEechhhcCC
Q psy11781 582 TYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNS 661 (1228)
Q Consensus 582 ~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~ 661 (1228)
.+.+..++++| ++++|.-..-.+.++|.+.+..+...
T Consensus 237 -----------~~~v~~~~~sp--------------------------------~~~~la~~~~~~i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 237 -----------QDEVFSLAFSP--------------------------------NRYWLAAATATGIKVFSLDPQYLVDD 273 (319)
T ss_dssp -----------CSCEEEEEECS--------------------------------SSSEEEEEETTEEEEEEETTEEEEEE
T ss_pred -----------CCcEEEEEEcC--------------------------------CCCEEEEEcCCCcEEEEeCcCeeeec
Confidence 12244566665 45566655555555666654332111
Q ss_pred CCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCC
Q psy11781 662 SRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 662 ~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~ 713 (1228)
- ...+.... .........++...+|...++--..+.|..|+..
T Consensus 274 ~--------~~~~~~~~-~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 274 L--------RPEFAGYS-KAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp E--------CCCCTTCC-GGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred c--------Cccccccc-cCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 0 00000000 0001123457778899888888888899999875
No 192
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=71.54 E-value=1.2e+02 Score=32.90 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=34.6
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeE
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 566 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~s 566 (1228)
.|.+||+.+++.++.+.++.. ...+.+... ..++.++..+. ..+.|.+||+.+++.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~-~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET-------VYSHHMSPV-STKHCLVAVGT-RGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC-------EEEEEECSS-CSSCCEEEEEE-SSSSEEEEESSSSCC
T ss_pred eEEEeeCCCCccceeccCCCc-------eeeeEeecC-CCCCcEEEEEc-CCCeEEEEeCCCcce
Confidence 499999999999988876543 223333211 11223444443 456899999987653
No 193
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=71.09 E-value=1.3e+02 Score=33.11 Aligned_cols=55 Identities=13% Similarity=0.316 Sum_probs=35.0
Q ss_pred cceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEE
Q psy11781 687 SASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWI 748 (1228)
Q Consensus 687 ~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyV 748 (1228)
..+++..+|.+.++-...+.|..||..++ ..+..+.... .....+++.++|.+.+
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~----~~~~~l~~h~---~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKG----SRVSILFGHE---NRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTC----SEEEEECCCS---SCEEEEEECTTSSCEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCC----ceEEEEECCC---CcEEEEEECCCCCEEE
Confidence 45667788888888888899999998622 1222332111 3455677777776433
No 194
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=70.70 E-value=99 Score=37.69 Aligned_cols=78 Identities=6% Similarity=0.082 Sum_probs=49.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++++-+.=. . .-.|.+||+.+++.++++.... .....+.+.. ++.++..
T Consensus 15 ~v~~i~~sp~~~~la~~~--~----------~g~v~iwd~~~~~~~~~~~~~~------~~v~~~~~s~----~~~~l~~ 72 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTL--Y----------SGRVEIWNYETQVEVRSIQVTE------TPVRAGKFIA----RKNWIIV 72 (814)
T ss_dssp CEEEEEECSSSSEEEEEE--T----------TSEEEEEETTTTEEEEEEECCS------SCEEEEEEEG----GGTEEEE
T ss_pred ceEEEEECCCCCEEEEEe--C----------CCEEEEEECCCCceEEEEecCC------CcEEEEEEeC----CCCEEEE
Confidence 356667777665433211 1 1349999999999998877533 3456666652 3344444
Q ss_pred ecCCCCeEEEEEcCCCeEEEE
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv 569 (1228)
+.. .+.|.|||+.+++.-+.
T Consensus 73 ~~~-dg~i~vw~~~~~~~~~~ 92 (814)
T 3mkq_A 73 GSD-DFRIRVFNYNTGEKVVD 92 (814)
T ss_dssp EET-TSEEEEEETTTCCEEEE
T ss_pred EeC-CCeEEEEECCCCcEEEE
Confidence 443 56899999998865443
No 195
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=70.33 E-value=1.1e+02 Score=33.22 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=24.3
Q ss_pred CcccEEEcCCCcEEEEecCCCeEEEEeCC
Q psy11781 1135 QASASAINSNGVMFYNLVTKHSVGCWNTK 1163 (1228)
Q Consensus 1135 qs~g~~~D~~G~LY~t~~~~~aI~~wn~~ 1163 (1228)
....++++.+|.++++--....|..||..
T Consensus 293 ~v~~~~~~~~~~~l~~~~~dg~i~iwd~~ 321 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAGWDGKLRFWDVK 321 (397)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETT
T ss_pred cEEEEEECCCCCEEEEEeCCCeEEEEEcC
Confidence 35677888889888888888999999997
No 196
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=70.03 E-value=35 Score=36.28 Aligned_cols=57 Identities=12% Similarity=0.122 Sum_probs=37.0
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEe
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv 1019 (1228)
.|.+||++++++++++.-.. ..+..+.+.. ++.++..+. ..+.|.+||+.+++..+.
T Consensus 196 ~i~i~d~~~~~~~~~~~~h~------~~v~~~~~s~----~~~~l~s~s-~Dg~i~iwd~~~~~~~~~ 252 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGHT------GYLNTVTVSP----DGSLCASGG-KDGQAMLWDLNEGKHLYT 252 (340)
T ss_dssp CEEEEETTTTEEEEEECCCS------SCEEEEEECT----TSSEEEEEE-TTCEEEEEETTTTEEEEE
T ss_pred EEEEEECCCCceeeEecCCC------CcEEEEEECC----CCCEEEEEe-CCCeEEEEEeccCceeee
Confidence 58899999999887654322 3455566542 244544443 346899999998876554
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=69.85 E-value=1.8e+02 Score=35.40 Aligned_cols=28 Identities=11% Similarity=-0.059 Sum_probs=21.1
Q ss_pred CCeEEEEecCCCC---eEEEEEcCCCeEEEE
Q psy11781 542 DHVFAYVNDVFRY---GLIVYDFFKNTSYRL 569 (1228)
Q Consensus 542 ~~~~aYItDs~~~---gLIVyDl~~g~swRv 569 (1228)
++..||..|.++. .|.|+|+.+|+..+.
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCcc
Confidence 4567888775543 899999999987664
No 198
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=69.20 E-value=19 Score=39.33 Aligned_cols=30 Identities=13% Similarity=-0.007 Sum_probs=23.3
Q ss_pred CcccEEEcCCCcEEEEecCCCeEEEEeCCC
Q psy11781 1135 QASASAINSNGVMFYNLVTKHSVGCWNTKT 1164 (1228)
Q Consensus 1135 qs~g~~~D~~G~LY~t~~~~~aI~~wn~~~ 1164 (1228)
....++++.+|.++++--....|..||..+
T Consensus 207 ~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 207 WVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp SEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred eEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 356788888998777777888999999873
No 199
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=69.15 E-value=49 Score=36.56 Aligned_cols=28 Identities=7% Similarity=0.089 Sum_probs=24.3
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCC
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~ 713 (1228)
-..++.+.+|.++++-...+.|..||..
T Consensus 243 v~~~~~s~~~~~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 243 VVDMKWSTDGSKLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp EEEEEECTTSCEEEEEETTCEEEEEESS
T ss_pred EEEEEECCCCCEEEEEECCCEEEEEEcc
Confidence 4677888899999888888999999986
No 200
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=68.41 E-value=1.5e+02 Score=32.80 Aligned_cols=28 Identities=21% Similarity=0.415 Sum_probs=22.3
Q ss_pred cccEEEcCCCcEEEEe---cCCCeEEEEeCC
Q psy11781 1136 ASASAINSNGVMFYNL---VTKHSVGCWNTK 1163 (1228)
Q Consensus 1136 s~g~~~D~~G~LY~t~---~~~~aI~~wn~~ 1163 (1228)
...+++..+|.++++- -....|..||..
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 4567777888877776 678899999997
No 201
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=67.74 E-value=2.2e+02 Score=34.59 Aligned_cols=28 Identities=11% Similarity=-0.059 Sum_probs=21.2
Q ss_pred CceEEEEEcCCCC---eEEEEECCCCeEEEe
Q psy11781 992 DHVFAYVNDVFRY---GLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 992 ~~~~aYItD~~~~---gLIVydl~~g~swRv 1019 (1228)
.+..||..|.++. .|.|+|+++|+..+.
T Consensus 136 g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~ 166 (710)
T 2xdw_A 136 GEYFAYGLSASGSDWVTIKFMKVDGAKELPD 166 (710)
T ss_dssp SSEEEEEEEETTCSCEEEEEEETTTTEEEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCcc
Confidence 4567888876543 899999999987663
No 202
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=67.11 E-value=68 Score=38.88 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=44.1
Q ss_pred eEEEEEccCCcEEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeC-------CcceEEEEEccCCce---eee--
Q psy11781 62 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV-------FRYGLIVYDFFKNTS---YRL-- 129 (1228)
Q Consensus 62 kl~~~dl~t~~~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~-------~~~g~iv~dl~~~~s---wR~-- 129 (1228)
.|..+|+++++..+...-.... +. .+..+. ..-.|+-+||..+. ....|-++|+.+++. .++
T Consensus 37 ~i~~~~~~~g~~~~~~~~~~~~--~~-~~~~~~---~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~ 110 (719)
T 1z68_A 37 NIVLYNIETGQSYTILSNRTMK--SV-NASNYG---LSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPR 110 (719)
T ss_dssp CEEEEESSSCCEEEEECHHHHH--TT-TCSEEE---ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCS
T ss_pred CEEEEEcCCCcEEEEEcccccc--cc-ceeeEE---ECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCc
Confidence 5667777777765443322110 00 011221 23447778888873 357899999999987 665
Q ss_pred --ecCccccCCCcccee
Q psy11781 130 --THPYMYPEPTQSTYI 144 (1228)
Q Consensus 130 --~h~~~~~~p~~~~~~ 144 (1228)
.++.+.||-..+-|.
T Consensus 111 ~~~~~~~SPDG~~la~~ 127 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYV 127 (719)
T ss_dssp SBCCEEECSSTTCEEEE
T ss_pred ccccceECCCCCEEEEE
Confidence 345566665555333
No 203
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=66.75 E-value=88 Score=33.34 Aligned_cols=59 Identities=7% Similarity=-0.016 Sum_probs=37.0
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEE
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 1018 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swR 1018 (1228)
.|.+||+++++.++.+.- .......+..+.+.. ++.++..+.. .+.|.+||+.+++..+
T Consensus 139 ~i~iwd~~~~~~~~~~~~---~~~~~~~v~~~~~~~----~~~~l~~~~~-dg~i~i~d~~~~~~~~ 197 (366)
T 3k26_A 139 ALRLWNIQTDTLVAIFGG---VEGHRDEVLSADYDL----LGEKIMSCGM-DHSLKLWRINSKRMMN 197 (366)
T ss_dssp CEEEEETTTTEEEEEECS---TTSCSSCEEEEEECT----TSSEEEEEET-TSCEEEEESCSHHHHH
T ss_pred eEEEEEeecCeEEEEecc---cccccCceeEEEECC----CCCEEEEecC-CCCEEEEECCCCcccc
Confidence 588999999988876532 111234456666642 2345544433 4689999999876544
No 204
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=66.46 E-value=1.5e+02 Score=32.09 Aligned_cols=56 Identities=13% Similarity=0.103 Sum_probs=35.0
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeE
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS 1016 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~s 1016 (1228)
.|.+||+.+++.++.+.++.. ...+.+... ..++.++..+. ..+.|.+||+.+++.
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~~~~~~~~~-~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEET-------VYSHHMSPV-STKHCLVAVGT-RGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSC-------EEEEEECSS-CSSCCEEEEEE-SSSSEEEEESSSSCC
T ss_pred eEEEeeCCCCccceeccCCCc-------eeeeEeecC-CCCCcEEEEEc-CCCeEEEEeCCCcce
Confidence 799999999999998886543 222333211 11223444443 346799999987753
No 205
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=66.42 E-value=1.5e+02 Score=32.66 Aligned_cols=76 Identities=14% Similarity=0.115 Sum_probs=45.6
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...++|++-+. |..+ -.|.+||+++++.++.+.-.. .....+++.. ++...++
T Consensus 141 ~V~~v~~spdg~~l~s--gs~d----------g~v~iwd~~~~~~~~~~~~h~------~~v~~v~~s~----~~~~~~~ 198 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVS--GGKD----------FSVKVWDLSQKAVLKSYNAHS------SEVNCVAACP----GKDTIFL 198 (357)
T ss_dssp CEEEEEECSSSSEEEE--EETT----------SCEEEEETTTTEEEEEECCCS------SCEEEEEECT----TCSSCEE
T ss_pred CEEEEEECCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEcCCC------CCEEEEEEcc----CCCceee
Confidence 3556667777765442 2111 238899999999987665422 3345555531 2233455
Q ss_pred ecCCCCeEEEEEcCCCeE
Q psy11781 549 NDVFRYGLIVYDFFKNTS 566 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~s 566 (1228)
+-...+.|.+||+.+++.
T Consensus 199 s~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 199 SCGEDGRILLWDTRKPKP 216 (357)
T ss_dssp EEETTSCEEECCTTSSSC
T ss_pred eeccCCceEEEECCCCce
Confidence 555567899999988653
No 206
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=65.76 E-value=48 Score=35.85 Aligned_cols=140 Identities=12% Similarity=0.208 Sum_probs=76.9
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcc
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQS 1031 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~ 1031 (1228)
.|.+||+++.++...+.-. ...+..+.+.. ++.++..+. ..+.|.+||+.+++.-+....
T Consensus 177 ~i~~wd~~~~~~~~~~~~h------~~~v~~~~~sp----~g~~l~s~~-~dg~i~iwd~~~~~~~~~~~~--------- 236 (319)
T 3frx_A 177 MVKAWNLNQFQIEADFIGH------NSNINTLTASP----DGTLIASAG-KDGEIMLWNLAAKKAMYTLSA--------- 236 (319)
T ss_dssp CEEEEETTTTEEEEEECCC------CSCEEEEEECT----TSSEEEEEE-TTCEEEEEETTTTEEEEEEEC---------
T ss_pred EEEEEECCcchhheeecCC------CCcEEEEEEcC----CCCEEEEEe-CCCeEEEEECCCCcEEEEecC---------
Confidence 5788999988877654321 23455555542 233443333 346899999998875543210
Q ss_pred eeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCccccceecCCCceEEEEeCCCCceEEEecchhcCC
Q psy11781 1032 TYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNS 1111 (1228)
Q Consensus 1032 ~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~di~ls~d~r~LYf~plss~~ly~V~T~~Lr~~ 1111 (1228)
.+.+..++++ |++++|.-..-.+.++|.+++..+...
T Consensus 237 -----------~~~v~~~~~s--------------------------------p~~~~la~~~~~~i~v~~~~~~~~~~~ 273 (319)
T 3frx_A 237 -----------QDEVFSLAFS--------------------------------PNRYWLAAATATGIKVFSLDPQYLVDD 273 (319)
T ss_dssp -----------CSCEEEEEEC--------------------------------SSSSEEEEEETTEEEEEEETTEEEEEE
T ss_pred -----------CCcEEEEEEc--------------------------------CCCCEEEEEcCCCcEEEEeCcCeeeec
Confidence 1123334444 356666655555556666654333211
Q ss_pred cccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCeEEEEeCC
Q psy11781 1112 SRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTK 1163 (1228)
Q Consensus 1112 ~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~aI~~wn~~ 1163 (1228)
.. . .+... .+........+++..+|..+++--..+.|..|+..
T Consensus 274 ~~---~-----~~~~~-~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 274 LR---P-----EFAGY-SKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EC---C-----CCTTC-CGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cC---c-----ccccc-ccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 10 0 00000 00101123467788999888888888889999875
No 207
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=65.50 E-value=23 Score=43.96 Aligned_cols=76 Identities=14% Similarity=0.179 Sum_probs=54.0
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeE-EEee-cCCcCcCCC
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT-HPYMYPEPT 1029 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~s-wRv~-h~s~~pdP~ 1029 (1228)
.|.+||++|++++-+++.+.... + ..++. .++.+|+.. ..+.|.+||.++|+- |++. .......|
T Consensus 456 ~l~A~D~~tG~~~W~~~~~~~~~--~---g~~~t------agglvf~gt-~dg~l~a~D~~tG~~lw~~~~~~~~~~~p- 522 (689)
T 1yiq_A 456 KLIAWDPVKQQAAWEVPYVTIFN--G---GTLST------AGNLVFEGS-ADGRVIAYAADTGEKLWEQPAASGVMAAP- 522 (689)
T ss_dssp EEEEEETTTTEEEEEEEESSSCC--C---CEEEE------TTTEEEEEC-TTSEEEEEETTTCCEEEEEECSSCCCSCC-
T ss_pred eEEEEECCCCCeEeEccCCCCcc--C---ccceE------CCCEEEEEC-CCCcEEEEECCCCccceeeeCCCCcccCc-
Confidence 69999999999999888854321 1 12222 467899984 567899999999975 7776 34444555
Q ss_pred cceeEEcCEEEE
Q psy11781 1030 QSTYILDNLKFR 1041 (1228)
Q Consensus 1030 ~~~~~i~G~~f~ 1041 (1228)
..|.++|+.+-
T Consensus 523 -~ty~~~G~qyv 533 (689)
T 1yiq_A 523 -VTYSVDGEQYV 533 (689)
T ss_dssp -EEEEETTEEEE
T ss_pred -eEEEECCEEEE
Confidence 45678998774
No 208
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=65.15 E-value=1.7e+02 Score=32.35 Aligned_cols=80 Identities=9% Similarity=0.098 Sum_probs=46.1
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECC-CCcEEEEEECCCccc-ccCCCceeEEEEeecCCCCeEEE
Q psy11781 470 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLK-TNTLIRKYILPTAQV-FEGSLFSNIVTEVVEDCDHVFAY 547 (1228)
Q Consensus 470 V~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~-td~vi~~y~~p~~v~-~~~S~l~di~VD~~~~c~~~~aY 547 (1228)
|..+...+++++.+. | -+ -+|.+||+. +++.++.+.+..... .....+..+.+.. ++....
T Consensus 180 v~~~~~~~~~~~l~s--~-~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p----~~~~~l 242 (447)
T 3dw8_B 180 INSISINSDYETYLS--A-DD----------LRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP----NSCNTF 242 (447)
T ss_dssp CCEEEECTTSSEEEE--E-CS----------SEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS----SCTTEE
T ss_pred eEEEEEcCCCCEEEE--e-CC----------CeEEEEECCCCCceeeeeecccccccccCcceEEEEECC----CCCcEE
Confidence 445566666665554 3 12 348999998 456666666544222 2234566677752 221233
Q ss_pred EecCCCCeEEEEEcCCCeE
Q psy11781 548 VNDVFRYGLIVYDFFKNTS 566 (1228)
Q Consensus 548 ItDs~~~gLIVyDl~~g~s 566 (1228)
++=+..+.|.+||+.+++.
T Consensus 243 ~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 243 VYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp EEEETTSCEEEEETTTCSS
T ss_pred EEEeCCCeEEEEECcCCcc
Confidence 3333456899999998764
No 209
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=64.95 E-value=1.7e+02 Score=32.17 Aligned_cols=159 Identities=10% Similarity=0.084 Sum_probs=85.1
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEeecCCcCcCCCcc
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQS 1031 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~h~s~~pdP~~~ 1031 (1228)
.|.+||+.+++.++++.-. ...+..+.+.. ++.+++.+. ..+.|.+||+.+++..+.......+.
T Consensus 162 ~i~iwd~~~~~~~~~~~~h------~~~v~~~~~~~----~~~~l~s~~-~d~~v~iwd~~~~~~~~~~~~~~~~~---- 226 (420)
T 3vl1_A 162 QLKIWSVKDGSNPRTLIGH------RATVTDIAIID----RGRNVLSAS-LDGTIRLWECGTGTTIHTFNRKENPH---- 226 (420)
T ss_dssp EEEEEETTTCCCCEEEECC------SSCEEEEEEET----TTTEEEEEE-TTSCEEEEETTTTEEEEEECBTTBTT----
T ss_pred eEEEEeCCCCcCceEEcCC------CCcEEEEEEcC----CCCEEEEEc-CCCcEEEeECCCCceeEEeecCCCCC----
Confidence 7999999999888766532 23455666652 234444333 34579999999998777552111111
Q ss_pred eeEEcCEEEEeeCCccceecCccccccccCCCccccccccccccCcccc-ceecCCCceEEEEeCCCCceEEEecchhcC
Q psy11781 1032 TYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVD-KTIRDDQRYMYFHSLSSNRHYYVSTTDLRN 1110 (1228)
Q Consensus 1032 ~~~i~G~~f~~~dGi~GiaLsp~~~~~~~~~p~~~~~~~~~~~~~~~~d-i~ls~d~r~LYf~plss~~ly~V~T~~Lr~ 1110 (1228)
.++..+++.+.... .... .+ ...+. ++.+|+++.|+.....+. +...+. +.
T Consensus 227 ------------~~v~~~~~~~~~~~-------~~~~---~~--~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~---~~ 278 (420)
T 3vl1_A 227 ------------DGVNSIALFVGTDR-------QLHE---IS--TSKKNNLEFGTYGKYVIAGHVSGV-ITVHNV---FS 278 (420)
T ss_dssp ------------CCEEEEEEEECCCS-------SCGG---GC--CCCCCTTCSSCTTEEEEEEETTSC-EEEEET---TT
T ss_pred ------------CCccEEEEecCCcc-------eeee---cc--cCcccceEEcCCCCEEEEEcCCCe-EEEEEC---CC
Confidence 01111222211000 0000 00 01122 678889998877766554 333332 11
Q ss_pred CcccCCccccccceEEeccccCCCCcccEEEcCCCc-EEEEecCCCeEEEEeCCC
Q psy11781 1111 SSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHSVGCWNTKT 1164 (1228)
Q Consensus 1111 ~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~-LY~t~~~~~aI~~wn~~~ 1164 (1228)
.. .+..+-. +.......++++.+|. ++++--....|..||..+
T Consensus 279 ~~----------~~~~~~~-~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~ 322 (420)
T 3vl1_A 279 KE----------QTIQLPS-KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRS 322 (420)
T ss_dssp CC----------EEEEECC-TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred Cc----------eeEEccc-ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCC
Confidence 11 1111111 1112356778888887 777777889999999973
No 210
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=64.72 E-value=1.6e+02 Score=32.47 Aligned_cols=75 Identities=15% Similarity=0.125 Sum_probs=45.2
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
|..+...++|++-+. |..+ -.|.+||++++++++.+.-.. ..+..+.+.. ++...+++
T Consensus 142 V~~v~~spdg~~l~s--gs~d----------g~v~iwd~~~~~~~~~~~~h~------~~v~~v~~s~----~~~~~~~s 199 (357)
T 4g56_B 142 VKTLSVFSDGTQAVS--GGKD----------FSVKVWDLSQKAVLKSYNAHS------SEVNCVAACP----GKDTIFLS 199 (357)
T ss_dssp EEEEEECSSSSEEEE--EETT----------SCEEEEETTTTEEEEEECCCS------SCEEEEEECT----TCSSCEEE
T ss_pred EEEEEECCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEcCCC------CCEEEEEEcc----CCCceeee
Confidence 556677777765442 2221 158899999999998765432 2344454421 22234444
Q ss_pred cCCCCeEEEEECCCCeE
Q psy11781 1000 DVFRYGLIVYDFFKNTS 1016 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~s 1016 (1228)
-...+.|.+||+++++.
T Consensus 200 ~~~dg~v~~wd~~~~~~ 216 (357)
T 4g56_B 200 CGEDGRILLWDTRKPKP 216 (357)
T ss_dssp EETTSCEEECCTTSSSC
T ss_pred eccCCceEEEECCCCce
Confidence 44556799999988753
No 211
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=64.66 E-value=1.1e+02 Score=35.66 Aligned_cols=73 Identities=14% Similarity=0.149 Sum_probs=44.5
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCC----cEEEEEECCCcccccCCC-ceeEEEEeecCCCCe
Q psy11781 470 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSL-FSNIVTEVVEDCDHV 544 (1228)
Q Consensus 470 V~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td----~vi~~y~~p~~v~~~~S~-l~di~VD~~~~c~~~ 544 (1228)
|..+...++|++.+.=.+ -.|.+||+.++ +.++++.-. ... +..+++.... ++.
T Consensus 21 v~~~~~spdg~~l~~~~~-------------~~v~v~~~~~~~~~~~~~~~~~~h------~~~~v~~~~~sp~~--~~~ 79 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCG-------------KSAFVRCLDDGDSKVPPVVQFTGH------GSSVVTTVKFSPIK--GSQ 79 (615)
T ss_dssp CCCCEEETTTTEEEEEET-------------TEEEEEECCSSCCSSCSEEEECTT------TTSCEEEEEECSST--TCC
T ss_pred eeEEEECCCCCEEEEecC-------------CeEEEEECCCCCCccccceEEecC------CCceEEEEEECcCC--CCC
Confidence 555677788875554221 24999999988 777655432 233 6666765100 234
Q ss_pred EEEEecCCCCeEEEEEcCCC
Q psy11781 545 FAYVNDVFRYGLIVYDFFKN 564 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g 564 (1228)
++..+.. .+.|.|||+.++
T Consensus 80 ~l~s~~~-dg~v~vw~~~~~ 98 (615)
T 1pgu_A 80 YLCSGDE-SGKVIVWGWTFD 98 (615)
T ss_dssp EEEEEET-TSEEEEEEEEEE
T ss_pred EEEEecC-CCEEEEEeCCCC
Confidence 5555543 568999999765
No 212
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=64.60 E-value=70 Score=35.28 Aligned_cols=65 Identities=9% Similarity=0.130 Sum_probs=42.6
Q ss_pred ceecCCCceEEEEeCCCC--ceEEEecchhcCCcccCCccccccceEEe--c-cccCCCCcccEEEcCCCcEEEEecCCC
Q psy11781 1081 KTIRDDQRYMYFHSLSSN--RHYYVSTTDLRNSSRYVNSSDIDEYFHYL--G-SRFRNTQASASAINSNGVMFYNLVTKH 1155 (1228)
Q Consensus 1081 i~ls~d~r~LYf~plss~--~ly~V~T~~Lr~~~~~~~~~~~~~~v~~l--G-~rg~~sqs~g~~~D~~G~LY~t~~~~~ 1155 (1228)
++.||++++|.-...-+. ++|.+.+ .. .+..+ | .. .....++++.+|.++++--...
T Consensus 201 ~~~s~~g~~l~s~s~d~~~v~iwd~~~-----~~----------~~~~~~~g~h~---~~v~~~~~s~~~~~l~s~s~d~ 262 (355)
T 3vu4_A 201 VRLNRKSDMVATCSQDGTIIRVFKTED-----GV----------LVREFRRGLDR---ADVVDMKWSTDGSKLAVVSDKW 262 (355)
T ss_dssp EEECTTSSEEEEEETTCSEEEEEETTT-----CC----------EEEEEECTTCC---SCEEEEEECTTSCEEEEEETTC
T ss_pred EEECCCCCEEEEEeCCCCEEEEEECCC-----Cc----------EEEEEEcCCCC---CcEEEEEECCCCCEEEEEECCC
Confidence 778899988777666553 3443321 11 11111 2 22 2356788889999998888889
Q ss_pred eEEEEeCC
Q psy11781 1156 SVGCWNTK 1163 (1228)
Q Consensus 1156 aI~~wn~~ 1163 (1228)
.|..||..
T Consensus 263 ~v~iw~~~ 270 (355)
T 3vu4_A 263 TLHVFEIF 270 (355)
T ss_dssp EEEEEESS
T ss_pred EEEEEEcc
Confidence 99999986
No 213
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=64.57 E-value=1.5e+02 Score=31.36 Aligned_cols=79 Identities=5% Similarity=0.092 Sum_probs=48.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+....++++.+. |..+ -.|.+||+++++.++++.-.. ..+..+.+.. ++.+++.
T Consensus 67 ~v~~~~~~~~~~~l~s--~~~d----------~~i~vwd~~~~~~~~~~~~~~------~~v~~~~~~~----~~~~l~s 124 (312)
T 4ery_A 67 GISDVAWSSDSNLLVS--ASDD----------KTLKIWDVSSGKCLKTLKGHS------NYVFCCNFNP----QSNLIVS 124 (312)
T ss_dssp CEEEEEECTTSSEEEE--EETT----------SEEEEEETTTCCEEEEEECCS------SCEEEEEECS----SSSEEEE
T ss_pred ceEEEEEcCCCCEEEE--ECCC----------CEEEEEECCCCcEEEEEcCCC------CCEEEEEEcC----CCCEEEE
Confidence 3566777777765543 2111 268999999999988776432 2344444432 2344444
Q ss_pred EcCCCCeEEEEECCCCeEEEee
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~ 1020 (1228)
.. ..+.|.+||+++++.-+..
T Consensus 125 ~~-~d~~i~iwd~~~~~~~~~~ 145 (312)
T 4ery_A 125 GS-FDESVRIWDVKTGKCLKTL 145 (312)
T ss_dssp EE-TTSCEEEEETTTCCEEEEE
T ss_pred Ee-CCCcEEEEECCCCEEEEEe
Confidence 43 3457999999998876654
No 214
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=64.56 E-value=91 Score=35.26 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=45.4
Q ss_pred EEEEEEEeC-CCcEEEEeCCCCCcccCcCccCCCEEEEEECCCC---cEEEEEECCCcccccCCCceeEEEEeecCCCCe
Q psy11781 469 SVFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHV 544 (1228)
Q Consensus 469 sV~~v~iD~-~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td---~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~ 544 (1228)
.|..+...+ .+.+.+...+. -+|.+||++++ +.+..+.- ..+.++.|.+.. .+.
T Consensus 233 ~v~~v~~~p~~~~~l~s~~~d------------g~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~p----~~~ 290 (430)
T 2xyi_A 233 VVEDVAWHLLHESLFGSVADD------------QKLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFNP----YSE 290 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETT------------SEEEEEETTCSCSSSCSEEEEC------CSSCEEEEEECS----SCT
T ss_pred CEeeeEEeCCCCCEEEEEeCC------------CeEEEEECCCCCCCcceeEeec------CCCCeEEEEeCC----CCC
Confidence 356666665 45566554432 34899999987 34444432 224466666652 244
Q ss_pred EEEEecCCCCeEEEEEcCCC
Q psy11781 545 FAYVNDVFRYGLIVYDFFKN 564 (1228)
Q Consensus 545 ~aYItDs~~~gLIVyDl~~g 564 (1228)
+++++=...+.|.|||+.+.
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNL 310 (430)
T ss_dssp TEEEEEETTSEEEEEETTCT
T ss_pred CEEEEEeCCCeEEEEeCCCC
Confidence 56766666778999999873
No 215
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=64.40 E-value=62 Score=38.23 Aligned_cols=76 Identities=11% Similarity=0.051 Sum_probs=44.9
Q ss_pred EEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEe
Q psy11781 470 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 549 (1228)
Q Consensus 470 V~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYIt 549 (1228)
+..+.-|.++.+++..... ++.+||+.++++.+...-+. .+++++.. ++..|+.+
T Consensus 114 ~~~~s~dg~~~~~~s~~~~-------------~~~l~d~~~g~~~~l~~~~~---------~~~~~spD---G~~la~~~ 168 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATED-------------RVALYALDGGGLRELARLPG---------FGFVSDIR---GDLIAGLG 168 (582)
T ss_dssp EEEEEECSSCEEEEEECSS-------------CEEEEEEETTEEEEEEEESS---------CEEEEEEE---TTEEEEEE
T ss_pred eeeeCCCCCeEEEEecCCC-------------CceEEEccCCcEEEeecCCC---------ceEEECCC---CCEEEEEE
Confidence 4466667666666543321 14478998887665433221 56666532 34455555
Q ss_pred cC-CC-CeEEEEEcCCCeEEEEc
Q psy11781 550 DV-FR-YGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 550 Ds-~~-~gLIVyDl~~g~swRv~ 570 (1228)
+. +. ..|.++|+.+++..++.
T Consensus 169 ~~~~~~~~i~~~d~~~g~~~~l~ 191 (582)
T 3o4h_A 169 FFGGGRVSLFTSNLSSGGLRVFD 191 (582)
T ss_dssp EEETTEEEEEEEETTTCCCEEEC
T ss_pred EcCCCCeEEEEEcCCCCCceEee
Confidence 43 22 56999999998876654
No 216
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=64.40 E-value=58 Score=38.96 Aligned_cols=72 Identities=8% Similarity=0.082 Sum_probs=39.2
Q ss_pred ceecCCCceEEEEeCCC-------CceEEEecchhcCCcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecC
Q psy11781 1081 KTIRDDQRYMYFHSLSS-------NRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVT 1153 (1228)
Q Consensus 1081 i~ls~d~r~LYf~plss-------~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~ 1153 (1228)
+++||||++|+|..... ..+|.++.+- +.. .....+..+... ......+...+|.+||+.-.
T Consensus 193 ~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~--~g~-------~~~~~~l~~~~~--~~~~~~~~spdg~l~~~~~~ 261 (662)
T 3azo_A 193 PRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE--DGR-------FADTRTLLGGPE--EAIAQAEWAPDGSLIVATDR 261 (662)
T ss_dssp CEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT--TSC-------EEEEEEEEEETT--BCEEEEEECTTSCEEEEECT
T ss_pred ceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC--CCc-------ccccEEeCCCCC--ceEcceEECCCCeEEEEECC
Confidence 35677999999987543 3466555310 110 011112222111 12345566778888777544
Q ss_pred CC--eEEEEeCC
Q psy11781 1154 KH--SVGCWNTK 1163 (1228)
Q Consensus 1154 ~~--aI~~wn~~ 1163 (1228)
.. .|+.||.+
T Consensus 262 ~~~~~l~~~~~~ 273 (662)
T 3azo_A 262 TGWWNLHRVDPA 273 (662)
T ss_dssp TSSCEEEEECTT
T ss_pred CCCeEEEEEECC
Confidence 44 79999975
No 217
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=64.38 E-value=1.7e+02 Score=31.97 Aligned_cols=58 Identities=12% Similarity=0.165 Sum_probs=34.9
Q ss_pred cccEEEcC-CCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCC-cEEEEe
Q psy11781 1136 ASASAINS-NGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPND-NIWILS 1200 (1228)
Q Consensus 1136 s~g~~~D~-~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg-~Lyvls 1200 (1228)
...+++.. +|.++++--....|..||..++. ....+.. . -.....+++.++| .+.+..
T Consensus 265 v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~----~~~~~~~-~--~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 265 ILSLDWCHQDEHLLLSSGRDNTVLLWNPESAE----QLSQFPA-R--GNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp EEEEEECSSCSSCEEEEESSSEEEEECSSSCC----EEEEEEC-S--SSCCCCEEECTTCTTEEEEC
T ss_pred eeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCc----cceeecC-C--CCceEEEEECCCCCCEEEEE
Confidence 45677776 88888888888999999987322 1222221 1 1244566666666 444443
No 218
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=63.87 E-value=41 Score=40.63 Aligned_cols=65 Identities=11% Similarity=-0.025 Sum_probs=38.0
Q ss_pred eEEEEEccCCcEEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeC--CcceEEEEEccCCceeee
Q psy11781 62 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDV--FRYGLIVYDFFKNTSYRL 129 (1228)
Q Consensus 62 kl~~~dl~t~~~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~--~~~g~iv~dl~~~~swR~ 129 (1228)
+|.++|+++++..+++.-+......+.++..+.+ ...|+-+|+..+. ...-|.++|+.+++.-++
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~---SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~ 295 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKW---ATSTKVAVTWLNRAQNVSILTLCDATTGVCTKK 295 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEE---SSSSEEEEEEEETTSCEEEEEEEETTTCCEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEE---eCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEE
Confidence 7999999999876666544322212223332322 2234555555544 345678889998886665
No 219
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=62.28 E-value=37 Score=40.23 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=39.1
Q ss_pred ccceEEccCCcEEEEcCC-----------------CCeEEEEeCCCCc-------------cCCC---CeeEEEecCCce
Q psy11781 686 ASASAINSNGVMFYNLVT-----------------KHSVGCWNTKTKV-------------YLPQ---TQDIVQTSRDIL 732 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~-----------------~~aI~~wn~~~~~-------------~~~~---n~~iV~~~d~~L 732 (1228)
...++++.+|.||++.-. ..+|.+.|++ +. |... ..+|.+. .+
T Consensus 141 g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~d-g~~~~~~y~iP~dNPf~~~~~~~~eI~a~---G~ 216 (463)
T 2wg3_C 141 GGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVD-TDMCNVPYSIPRSNPHFNSTNQPPEVFAH---GL 216 (463)
T ss_dssp EEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCC-CCCSSCSCBCCTTSTTTTCSSSCTTEEEE---CC
T ss_pred CCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECC-CCcccccCcCCCCCCCcCCCCCcccEEEE---CC
Confidence 567899999999998443 3579999998 41 1100 1133332 34
Q ss_pred ecCCceEEcCC-----CcEEEE
Q psy11781 733 NFPNDLKIDPN-----DNIWIL 749 (1228)
Q Consensus 733 ~wPd~l~Id~d-----g~LyVl 749 (1228)
+=|-+|+++++ |.||+.
T Consensus 217 RNp~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 217 HDPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp SSCCBEEEESSCSSTTCSEEEE
T ss_pred CCcceEEECCCCCCcccceEEE
Confidence 45889999986 666654
No 220
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=61.43 E-value=1.4e+02 Score=34.73 Aligned_cols=73 Identities=12% Similarity=0.114 Sum_probs=45.1
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCC----cEEEEEECCCCcccCCCc-ceeeEEEeecCCCce
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN----TLIRKYILPTAQVFEGSL-FSNIVTEVVEDCDHV 994 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td----~lir~y~~p~~~~~~~S~-l~di~VD~~~~c~~~ 994 (1228)
|..+...++|++-+.=.+ -.|.+||+.++ +.++++.-.. .. +..+.+.... ++.
T Consensus 21 v~~~~~spdg~~l~~~~~-------------~~v~v~~~~~~~~~~~~~~~~~~h~------~~~v~~~~~sp~~--~~~ 79 (615)
T 1pgu_A 21 TTHLSYDPTTNAIAYPCG-------------KSAFVRCLDDGDSKVPPVVQFTGHG------SSVVTTVKFSPIK--GSQ 79 (615)
T ss_dssp CCCCEEETTTTEEEEEET-------------TEEEEEECCSSCCSSCSEEEECTTT------TSCEEEEEECSST--TCC
T ss_pred eeEEEECCCCCEEEEecC-------------CeEEEEECCCCCCccccceEEecCC------CceEEEEEECcCC--CCC
Confidence 555677788876555321 16999999998 7776654322 23 5566664200 245
Q ss_pred EEEEEcCCCCeEEEEECCCC
Q psy11781 995 FAYVNDVFRYGLIVYDFFKN 1014 (1228)
Q Consensus 995 ~aYItD~~~~gLIVydl~~g 1014 (1228)
++..+.. .+.|.|||+.++
T Consensus 80 ~l~s~~~-dg~v~vw~~~~~ 98 (615)
T 1pgu_A 80 YLCSGDE-SGKVIVWGWTFD 98 (615)
T ss_dssp EEEEEET-TSEEEEEEEEEE
T ss_pred EEEEecC-CCEEEEEeCCCC
Confidence 5655554 468999999765
No 221
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=61.34 E-value=81 Score=35.67 Aligned_cols=73 Identities=11% Similarity=0.059 Sum_probs=43.8
Q ss_pred EEEEEEeC-CCcEEEEeCCCCCccccccccCCCEEEEEECCCC---cEEEEEECCCCcccCCCcceeeEEEeecCCCceE
Q psy11781 920 VFRMSVDK-CDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN---TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVF 995 (1228)
Q Consensus 920 V~~v~iD~-~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td---~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~ 995 (1228)
|..+.... .+.+.+...+.. +|.+||++++ +.+..+.- ..+.++.|.+.. .+.+
T Consensus 234 v~~v~~~p~~~~~l~s~~~dg------------~i~i~d~~~~~~~~~~~~~~~------~~~~v~~i~~~p----~~~~ 291 (430)
T 2xyi_A 234 VEDVAWHLLHESLFGSVADDQ------------KLMIWDTRNNNTSKPSHTVDA------HTAEVNCLSFNP----YSEF 291 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTS------------EEEEEETTCSCSSSCSEEEEC------CSSCEEEEEECS----SCTT
T ss_pred EeeeEEeCCCCCEEEEEeCCC------------eEEEEECCCCCCCcceeEeec------CCCCeEEEEeCC----CCCC
Confidence 55566655 455555543322 7899999987 45554432 124456666542 2345
Q ss_pred EEEEcCCCCeEEEEECCCC
Q psy11781 996 AYVNDVFRYGLIVYDFFKN 1014 (1228)
Q Consensus 996 aYItD~~~~gLIVydl~~g 1014 (1228)
++++=...+.|.|||+.+.
T Consensus 292 ~l~tg~~dg~v~vwd~~~~ 310 (430)
T 2xyi_A 292 ILATGSADKTVALWDLRNL 310 (430)
T ss_dssp EEEEEETTSEEEEEETTCT
T ss_pred EEEEEeCCCeEEEEeCCCC
Confidence 6666555678999999863
No 222
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=60.99 E-value=1.9e+02 Score=31.59 Aligned_cols=56 Identities=13% Similarity=0.260 Sum_probs=35.3
Q ss_pred ccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEE
Q psy11781 1137 SASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWIL 1199 (1228)
Q Consensus 1137 ~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvl 1199 (1228)
..+++..+|.+.++--....|..||..++. ....+.. --.+...+++.++|.+.+.
T Consensus 288 ~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~----~~~~l~~---h~~~v~~l~~spdg~~l~s 343 (354)
T 2pbi_B 288 SSVDFSLSGRLLFAGYNDYTINVWDVLKGS----RVSILFG---HENRVSTLRVSPDGTAFCS 343 (354)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCS----EEEEECC---CSSCEEEEEECTTSSCEEE
T ss_pred eEEEEeCCCCEEEEEECCCcEEEEECCCCc----eEEEEEC---CCCcEEEEEECCCCCEEEE
Confidence 456677889888888888999999986222 1222221 1124556777777764443
No 223
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=60.74 E-value=2.9e+02 Score=33.50 Aligned_cols=78 Identities=6% Similarity=0.087 Sum_probs=49.8
Q ss_pred EEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEE
Q psy11781 920 VFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVN 999 (1228)
Q Consensus 920 V~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYIt 999 (1228)
|..+...++|++-+.= .. .-.|.+||+.+++.++++.... ..+..+.... ++.++..+
T Consensus 16 v~~i~~sp~~~~la~~--~~----------~g~v~iwd~~~~~~~~~~~~~~------~~v~~~~~s~----~~~~l~~~ 73 (814)
T 3mkq_A 16 VKGIDFHPTEPWVLTT--LY----------SGRVEIWNYETQVEVRSIQVTE------TPVRAGKFIA----RKNWIIVG 73 (814)
T ss_dssp EEEEEECSSSSEEEEE--ET----------TSEEEEEETTTTEEEEEEECCS------SCEEEEEEEG----GGTEEEEE
T ss_pred eEEEEECCCCCEEEEE--eC----------CCEEEEEECCCCceEEEEecCC------CcEEEEEEeC----CCCEEEEE
Confidence 5566676666643321 11 1279999999999999887543 2355566553 23444444
Q ss_pred cCCCCeEEEEECCCCeEEEee
Q psy11781 1000 DVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 1000 D~~~~gLIVydl~~g~swRv~ 1020 (1228)
.. .+.|.|||+.+++.-+..
T Consensus 74 ~~-dg~i~vw~~~~~~~~~~~ 93 (814)
T 3mkq_A 74 SD-DFRIRVFNYNTGEKVVDF 93 (814)
T ss_dssp ET-TSEEEEEETTTCCEEEEE
T ss_pred eC-CCeEEEEECCCCcEEEEE
Confidence 43 568999999998876544
No 224
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=59.57 E-value=1.8e+02 Score=30.68 Aligned_cols=56 Identities=11% Similarity=0.145 Sum_probs=35.8
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEE
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 568 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swR 568 (1228)
+|.+||+++++.++.+.... ..+..+.+.. ++.++..+ +..+.|.+||+.+++.-+
T Consensus 130 ~i~iwd~~~~~~~~~~~~~~------~~v~~~~~~~----~~~~l~~~-~~d~~i~~wd~~~~~~~~ 185 (312)
T 4ery_A 130 SVRIWDVKTGKCLKTLPAHS------DPVSAVHFNR----DGSLIVSS-SYDGLCRIWDTASGQCLK 185 (312)
T ss_dssp CEEEEETTTCCEEEEECCCS------SCEEEEEECT----TSSEEEEE-ETTSCEEEEETTTCCEEE
T ss_pred cEEEEECCCCEEEEEecCCC------CcEEEEEEcC----CCCEEEEE-eCCCcEEEEECCCCceee
Confidence 48899999999887654322 2345555541 23344444 345689999999876544
No 225
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=58.17 E-value=14 Score=45.17 Aligned_cols=60 Identities=8% Similarity=0.119 Sum_probs=44.1
Q ss_pred ccccceEEccCCcEEE-EcCC-----------CCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCc-EEEE
Q psy11781 684 TQASASAINSNGVMFY-NLVT-----------KHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDN-IWIL 749 (1228)
Q Consensus 684 ~qs~G~a~D~~G~LY~-t~~~-----------~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~-LyVl 749 (1228)
..++++++|++|+||| +|.. .+.|+|.++.+++ +..++ ..+...-|.|+++.+|+. |||.
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe-----l~~fl-~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE-----IRRFM-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC-----EEEEE-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe-----EEEEE-eCCCCccccCCEECCCCCEEEEE
Confidence 5689999999999999 7753 5689999996343 34444 233445689999999986 5553
No 226
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=58.02 E-value=2.1e+02 Score=34.08 Aligned_cols=62 Identities=8% Similarity=-0.001 Sum_probs=35.0
Q ss_pred ccceEEccCCcEEEEcCCCC--eEEEEeCCCCccCCCCeeEEEecCCce---ec---CCceEEcCCCcEEEEecC
Q psy11781 686 ASASAINSNGVMFYNLVTKH--SVGCWNTKTKVYLPQTQDIVQTSRDIL---NF---PNDLKIDPNDNIWILSNK 752 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~--aI~~wn~~~~~~~~~n~~iV~~~d~~L---~w---Pd~l~Id~dg~LyVlsnr 752 (1228)
....+...+|.|||+.-..+ .|+.|+..++.. ..+....... .| ...+++.++|.+++.+++
T Consensus 244 ~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~-----~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~ 313 (662)
T 3azo_A 244 IAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA-----TQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK 313 (662)
T ss_dssp EEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE-----EESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS
T ss_pred EcceEECCCCeEEEEECCCCCeEEEEEECCCCce-----eecccccccccCccccccCceEeEeCCCEEEEEEEc
Confidence 34566677888877755444 899999852321 2221111111 22 235666677888777664
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=57.97 E-value=37 Score=41.90 Aligned_cols=77 Identities=13% Similarity=0.206 Sum_probs=52.4
Q ss_pred CEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeE-EEeec-CCcCcCC
Q psy11781 951 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLTH-PYMYPEP 1028 (1228)
Q Consensus 951 pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~s-wRv~h-~s~~pdP 1028 (1228)
-.|.+||++|++++-++..+.... + ..+.. .++.+|++ +..+.|.++|.++|+. |++.. ......|
T Consensus 457 g~l~A~D~~tG~~~W~~~~~~~~~--~---g~~~~------~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 524 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVEHVSPWN--G---GTLTT------AGNVVFQG-TADGRLVAYHAATGEKLWEAPTGTGVVAAP 524 (677)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCC--C---CEEEE------TTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cEEEEEeCCCCcEEeecCCCCCCc--C---cceEe------CCCEEEEE-CCCCcEEEEECCCCceeeeeeCCCCcccCC
Confidence 479999999999998888753211 1 11222 36789998 4568999999998875 77763 2333344
Q ss_pred CcceeEEcCEEEE
Q psy11781 1029 TQSTYILDNLKFR 1041 (1228)
Q Consensus 1029 ~~~~~~i~G~~f~ 1041 (1228)
..+..+|+.+.
T Consensus 525 --~~y~~~G~~~v 535 (677)
T 1kb0_A 525 --STYMVDGRQYV 535 (677)
T ss_dssp --EEEEETTEEEE
T ss_pred --EEEEeCCEEEE
Confidence 34557887664
No 228
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=57.90 E-value=1.1e+02 Score=32.83 Aligned_cols=37 Identities=16% Similarity=0.280 Sum_probs=23.7
Q ss_pred CCceeEEEEeecCCCCeEEEEecC-------CCCeEEEEEcCCCeEEEE
Q psy11781 528 SLFSNIVTEVVEDCDHVFAYVNDV-------FRYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 528 S~l~di~VD~~~~c~~~~aYItDs-------~~~gLIVyDl~~g~swRv 569 (1228)
..+.++++| ++..||+... ....|.++|+.+++..++
T Consensus 15 ~~~~~~~~d-----G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l 58 (347)
T 2gop_A 15 AYLSDPRTK-----GELVAYVLTKANLKDNKYENTIVIENLKNNARRFI 58 (347)
T ss_dssp CEEEEEEEE-----TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE
T ss_pred EEcccceEC-----CcEEEEEEeecCcccCCccceEEEEeCCCCceEEc
Confidence 445666665 5667777522 245688888888776554
No 229
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=57.21 E-value=71 Score=34.02 Aligned_cols=29 Identities=7% Similarity=0.069 Sum_probs=23.1
Q ss_pred CcccEEEcCCCc-EEEEecCCCeEEEEeCC
Q psy11781 1135 QASASAINSNGV-MFYNLVTKHSVGCWNTK 1163 (1228)
Q Consensus 1135 qs~g~~~D~~G~-LY~t~~~~~aI~~wn~~ 1163 (1228)
....+.+..+|. ++++--....|..||..
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 356677888887 77777788899999986
No 230
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=57.13 E-value=56 Score=40.22 Aligned_cols=142 Identities=11% Similarity=0.089 Sum_probs=74.4
Q ss_pred eEEEEEccC---Cc--EEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeCC--cceEEEEEccCCc-ee------
Q psy11781 62 KIMVFDLKT---NT--LIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF--RYGLIVYDFFKNT-SY------ 127 (1228)
Q Consensus 62 kl~~~dl~t---~~--~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~~--~~g~iv~dl~~~~-sw------ 127 (1228)
+|.++|+++ ++ ..++...|.+....+.++..+.+- .-|+.+|+..... ..-|.++|+.+|+ +|
T Consensus 229 ~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws---pdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~ 305 (740)
T 4a5s_A 229 KFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA---TQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVAR 305 (740)
T ss_dssp EEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE---ETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGG
T ss_pred EEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe---CCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEE
Confidence 689999999 74 345555554433244555555442 2266677777764 4468899999987 22
Q ss_pred ee---ecCcccc--CCCccceeeccceee-e---ccCeeeeecCcCCCCccccCCcccccccccccCCCcccccccCCCc
Q psy11781 128 RL---THPYMYP--EPTQSTYILDNLKFR-W---VDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQR 198 (1228)
Q Consensus 128 R~---~h~~~~~--~p~~~~~~~~~~~f~-~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 198 (1228)
++ .|....- .+....|.=+|..+- | .+|..-+++-....|+.++++.+ .-+|--.++.|++
T Consensus 306 ~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g----------~~~v~~~~~~d~~ 375 (740)
T 4a5s_A 306 QHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKG----------TWEVIGIEALTSD 375 (740)
T ss_dssp CEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCS----------SSCEEEEEEECSS
T ss_pred EeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccC----------CEEEEEEEEEeCC
Confidence 11 1221110 011222334444322 2 24544444433333333444432 1222222345689
Q ss_pred eEEEEecc------cCeeEEEecc
Q psy11781 199 YMYFHSLS------SNRHYYVSTT 216 (1228)
Q Consensus 199 ~lYf~~ls------S~~~~sV~T~ 216 (1228)
.|||..-. .+++|+|+..
T Consensus 376 ~i~f~~~~~~~~~~~~~ly~v~~~ 399 (740)
T 4a5s_A 376 YLYYISNEYKGMPGGRNLYKIQLI 399 (740)
T ss_dssp EEEEEESCGGGCTTCBEEEEEETT
T ss_pred EEEEEEecCCCCCceeEEEEEECC
Confidence 99998754 3689988754
No 231
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=57.06 E-value=2.5e+02 Score=31.50 Aligned_cols=57 Identities=11% Similarity=0.000 Sum_probs=37.8
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~ 1020 (1228)
.|.+||+++++.++++.-. ...+..+... .++.+..+. ..+.|.|||+.+++..+..
T Consensus 143 ~i~vwd~~~~~~~~~~~~h------~~~V~~l~~~-----~~~~l~s~s-~dg~i~vwd~~~~~~~~~~ 199 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSGH------DGGVWALKYA-----HGGILVSGS-TDRTVRVWDIKKGCCTHVF 199 (464)
T ss_dssp CEEEEETTTTEEEEEECCC------SSCEEEEEEC-----STTEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCcEEEEEeCC------CcCEEEEEEc-----CCCEEEEEe-CCCCEEEEECCCCcEEEEE
Confidence 6899999999998866522 2334555553 233444443 4568999999999866644
No 232
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=56.70 E-value=49 Score=39.13 Aligned_cols=60 Identities=17% Similarity=0.179 Sum_probs=39.7
Q ss_pred cccEEEcCCCcEEEEecC-----------------CCeEEEEeCCCCc-------------cccC---CeeEEEecCCce
Q psy11781 1136 ASASAINSNGVMFYNLVT-----------------KHSVGCWNTKTKV-------------YLPQ---TQDIVQTSRDIL 1182 (1228)
Q Consensus 1136 s~g~~~D~~G~LY~t~~~-----------------~~aI~~wn~~~~~-------------~~~~---n~~~v~~~~~~L 1182 (1228)
...++++.+|.||++.=. ..+|.+.|++ +. |... ..+|.+. -+
T Consensus 141 g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~d-g~~~~~~y~iP~dNPf~~~~~~~~eI~a~---G~ 216 (463)
T 2wg3_C 141 GGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVD-TDMCNVPYSIPRSNPHFNSTNQPPEVFAH---GL 216 (463)
T ss_dssp EEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCC-CCCSSCSCBCCTTSTTTTCSSSCTTEEEE---CC
T ss_pred CCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECC-CCcccccCcCCCCCCCcCCCCCcccEEEE---CC
Confidence 567899999999998432 3569999998 51 2110 1234432 35
Q ss_pred ecCCceEEeCC-----CcEEEE
Q psy11781 1183 NFPNDLKIDPN-----DNIWIL 1199 (1228)
Q Consensus 1183 ~wPd~l~id~d-----g~Lyvl 1199 (1228)
+=|-+|++|++ |.||+.
T Consensus 217 RNp~gla~dp~tg~~~G~l~~~ 238 (463)
T 2wg3_C 217 HDPGRCAVDRHPTDININLTIL 238 (463)
T ss_dssp SSCCBEEEESSCSSTTCSEEEE
T ss_pred CCcceEEECCCCCCcccceEEE
Confidence 56889999986 666654
No 233
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=56.56 E-value=2.2e+02 Score=30.88 Aligned_cols=60 Identities=12% Similarity=0.112 Sum_probs=37.1
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEe
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv 1019 (1228)
.|.+||+.+++....+.+.. ....+..+.+... +..+++.+. ..+.|.+||+.++....+
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~----h~~~v~~~~~~~~---~~~~l~s~~-~d~~i~iwd~~~~~~~~~ 156 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMG----PGDAITGMKFNQF---NTNQLFVSS-IRGATTLRDFSGSVIQVF 156 (383)
T ss_dssp CEEEEETTSTTCEEEECCCS----TTCBEEEEEEETT---EEEEEEEEE-TTTEEEEEETTSCEEEEE
T ss_pred eEEEEeCCCcccceeeecCC----cCCceeEEEeCCC---CCCEEEEEe-CCCEEEEEECCCCceEEE
Confidence 68999999998887665422 1234555665420 124454443 456899999997544443
No 234
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=56.02 E-value=2.1e+02 Score=30.30 Aligned_cols=29 Identities=7% Similarity=0.069 Sum_probs=22.8
Q ss_pred cccceEEccCCc-EEEEcCCCCeEEEEeCC
Q psy11781 685 QASASAINSNGV-MFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 685 qs~G~a~D~~G~-LY~t~~~~~aI~~wn~~ 713 (1228)
....+++..+|. ++++--..+.|..|+..
T Consensus 261 ~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 261 TVWQVRHLPQNRELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp CEEEEEEETTEEEEEEEEETTSEEEEEEEE
T ss_pred CEEEEEECCCCCcEEEEEeCCCcEEEeecC
Confidence 356677778887 77777788899999986
No 235
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=51.80 E-value=47 Score=40.27 Aligned_cols=80 Identities=9% Similarity=0.058 Sum_probs=53.9
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCe-EEEeecC-CcCcCCC
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-SYRLTHP-YMYPEPT 1029 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~-swRv~h~-s~~pdP~ 1029 (1228)
.|.+||++|++++-+++.+... .-..+++ .++.+|+.+. .+.|.+||.++|+ -|++.-+ .....|
T Consensus 467 ~l~A~D~~tG~~~W~~~~~~~~-----~~g~~~t------agglvf~g~~-dg~l~A~D~~tG~~lW~~~~~~g~~a~P- 533 (582)
T 1flg_A 467 SLRAMDPVSGKVVWEHKEHLPL-----WAGVLAT------AGNLVFTGTG-DGYFKAFDAKSGKELWKFQTGSGIVSPP- 533 (582)
T ss_dssp EEEEECTTTCCEEEEEEESSCC-----CSCCEEE------TTTEEEEECT-TSEEEEEETTTCCEEEEEECSSCCCSCC-
T ss_pred eEEEEECCCCCEEEEecCCCCC-----cccceEe------CCCEEEEECC-CCcEEEEECCCCCEEEEecCCCCcccCc-
Confidence 7999999999999888775321 1112333 3678999864 5789999999886 5887643 344444
Q ss_pred cceeEEcCEEEEe-eCC
Q psy11781 1030 QSTYILDNLKFRW-VDG 1045 (1228)
Q Consensus 1030 ~~~~~i~G~~f~~-~dG 1045 (1228)
..+.++|+.+-- .+|
T Consensus 534 -~~y~~~G~qYv~~~~G 549 (582)
T 1flg_A 534 -ITWEQDGEQYLGVTVG 549 (582)
T ss_dssp -EEEEETTEEEEEEEEC
T ss_pred -eEEEECCEEEEEEEcc
Confidence 345578887643 444
No 236
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=51.79 E-value=85 Score=37.88 Aligned_cols=65 Identities=11% Similarity=-0.028 Sum_probs=35.5
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEE-EEEcCC--CCeEEEEECCCCeEEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA-YVNDVF--RYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~a-YItD~~--~~gLIVydl~~g~swRv~ 1020 (1228)
+|.+||+.+++..+++..+.........+..+..- + ++.++ +.++.+ ...|.++|+++++..++.
T Consensus 229 ~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~S--p--Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 229 SLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWA--T--STKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp EEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEES--S--SSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCceeEEeeCCccCCCccceeEEEEEe--C--CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 78888888887554444332222122333333332 2 23344 333432 256889999999887764
No 237
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=51.49 E-value=2.4e+02 Score=29.78 Aligned_cols=59 Identities=14% Similarity=0.127 Sum_probs=38.8
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
.|.+||+.+++.++.+.-. ...+..+.+... ++.++.... ..+.|.+||+.+++..+..
T Consensus 96 ~i~v~d~~~~~~~~~~~~~------~~~i~~~~~~~~---~~~~l~s~~-~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 96 IIRIINPITMQCIKHYVGH------GNAINELKFHPR---DPNLLLSVS-KDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEEECTTTCCEEEEEESC------CSCEEEEEECSS---CTTEEEEEE-TTSCEEEEETTTTEEEEEE
T ss_pred EEEEEEchhceEeeeecCC------CCcEEEEEECCC---CCCEEEEEe-CCCeEEEEEeecCeEEEEe
Confidence 5999999999998876532 234556666410 233444333 4568999999998876654
No 238
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=51.32 E-value=2.5e+02 Score=29.81 Aligned_cols=78 Identities=5% Similarity=0.059 Sum_probs=48.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++.+-+. |.. .-+|.+||+.+++.++++..... ....+.+.. ++.++ +
T Consensus 15 ~V~~~~fsp~~~~l~s--~~~----------dg~v~lWd~~~~~~~~~~~~~~~------~v~~~~~~~----~~~~l-~ 71 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLT--TLY----------SGRVELWNYETQVEVRSIQVTET------PVRAGKFIA----RKNWI-I 71 (304)
T ss_dssp CEEEEEECSSSSEEEE--EET----------TSEEEEEETTTTEEEEEEECCSS------CEEEEEEEG----GGTEE-E
T ss_pred ceEEEEECCCCCEEEE--EcC----------CCcEEEEECCCCceeEEeeccCC------cEEEEEEeC----CCCEE-E
Confidence 4667777777765432 211 13589999999999987776432 244455541 22333 3
Q ss_pred ecCCCCeEEEEEcCCCeEEEE
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRL 569 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv 569 (1228)
+=+....|.|||+.+++.-+.
T Consensus 72 s~s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp EEETTSEEEEEETTTCCEEEE
T ss_pred EECCCCEEEEEECCCCcEEEE
Confidence 334567899999998875543
No 239
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=47.58 E-value=35 Score=41.55 Aligned_cols=64 Identities=17% Similarity=0.211 Sum_probs=41.4
Q ss_pred CCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeE-EEeecCCCceEEEEEcCCCCeEEEEECCCC
Q psy11781 949 CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIV-TEVVEDCDHVFAYVNDVFRYGLIVYDFFKN 1014 (1228)
Q Consensus 949 ~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~-VD~~~~c~~~~aYItD~~~~gLIVydl~~g 1014 (1228)
..++|+++|++|+++++++..+.... ..+.|..++ +|...+-.-.+||..|.+ +.|--+|+...
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~~-~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-GnlWRfDl~~~ 285 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRTG-VPNGLSSPRLADNNSDGVADYAYAGDLQ-GNLWRFDLIAG 285 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCSTT-SCCCEEEEEEECTTSSSBCCEEEEEETT-SEEEEEECSCS
T ss_pred CccEEEEEECCCCceEEEEecCCCCc-cCCccccceEEecCCCCceeEEEEEeCC-CcEEEEEcCCC
Confidence 46799999999999999999874322 223455543 553322223589999974 35555555543
No 240
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=47.52 E-value=49 Score=40.45 Aligned_cols=75 Identities=24% Similarity=0.324 Sum_probs=52.6
Q ss_pred CcceEEEEEEEeCCCcEEE-EeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCC
Q psy11781 465 NSLISVFRMSVDKCDRLWI-MDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDH 543 (1228)
Q Consensus 465 ~~lvsV~~v~iD~~gRLWV-LDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~ 543 (1228)
+.|.|+-.+.+|+.|+||| -|.+... .+.....+...++.+|..++++.+...-|. .+-.+.+.+.. ++
T Consensus 473 ~~fnsPDnL~fd~~G~LWf~TD~~~~~-~g~~~~~gnn~v~~~dp~tGel~~fl~~P~-----~aEpnGiafSP----D~ 542 (592)
T 4a9v_A 473 NMFNSPDGLGFDKAGRLWILTDGDSSN-AGDFAGMGNNQMLCADPATGEIRRFMVGPI-----GCEVTGISFSP----DQ 542 (592)
T ss_dssp TCCCCEEEEEECTTCCEEEEECCCCCC-SGGGTTCCSCEEEEECTTTCCEEEEEECCT-----TCEEEEEEECT----TS
T ss_pred CccCCCCceEECCCCCEEEEeCCCcCc-cccccccCCceEEEEeCCCCeEEEEEeCCC-----CccccCCEECC----CC
Confidence 5699999999999999999 7976421 122222355689999999999876544333 34567788762 46
Q ss_pred eEEEEe
Q psy11781 544 VFAYVN 549 (1228)
Q Consensus 544 ~~aYIt 549 (1228)
..+||+
T Consensus 543 ktLfV~ 548 (592)
T 4a9v_A 543 KTLFVG 548 (592)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 677765
No 241
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=47.34 E-value=4.5e+02 Score=31.74 Aligned_cols=25 Identities=16% Similarity=-0.013 Sum_probs=19.3
Q ss_pred CceEEEEEcCCC---CeEEEEECCCCeE
Q psy11781 992 DHVFAYVNDVFR---YGLIVYDFFKNTS 1016 (1228)
Q Consensus 992 ~~~~aYItD~~~---~gLIVydl~~g~s 1016 (1228)
.+..||..|.++ ..|.|+|+++|+.
T Consensus 132 G~~la~~~~~~G~~~~~i~v~dl~tg~~ 159 (695)
T 2bkl_A 132 GKKVAFAQKPNAADEAVLHVIDVDSGEW 159 (695)
T ss_dssp SSEEEEEEEETTCSCCEEEEEETTTCCB
T ss_pred CCEEEEEECCCCCceEEEEEEECCCCCC
Confidence 456788888553 6899999999864
No 242
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=47.28 E-value=2.8e+02 Score=29.26 Aligned_cols=59 Identities=12% Similarity=0.180 Sum_probs=38.9
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEec
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 751 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVlsn 751 (1228)
...++++.+|.+.++--..+.|..||..++ ..+..-...-....++++.++|.+.+.+.
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDAR-------TKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTT-------EEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCC-------cEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 456788888888888788899999999722 12221111123456788888887555553
No 243
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=47.20 E-value=3.8e+02 Score=30.81 Aligned_cols=56 Identities=11% Similarity=0.171 Sum_probs=34.9
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEE
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWIL 749 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVl 749 (1228)
-..+++..+|.+.++--....|..||.. ++. +..+...... ..++++.+||...+.
T Consensus 511 v~~l~~s~dg~~l~s~~~dg~v~lwd~~-~~~----~~~~~~h~~~---v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 511 VRGVAFSPDGQTIASASDDKTVKLWNRN-GQL----LQTLTGHSSS---VWGVAFSPDGQTIAS 566 (577)
T ss_dssp EEEEEECTTSSCEEEEETTSEEEEECTT-SCE----EEEEECCSSC---EEEEEECTTSSCEEE
T ss_pred EEEEEEcCCCCEEEEEECcCEEEEEeCC-CCE----EEEEcCCCCC---EEEEEEcCCCCEEEE
Confidence 4567788888888877778899999976 432 2222211212 346777778764443
No 244
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=46.13 E-value=3.5e+02 Score=30.14 Aligned_cols=79 Identities=6% Similarity=-0.013 Sum_probs=49.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...+++.+.+. |.. .-.|.+||+.+++.++++.-.. ..+..+.+. .++...+
T Consensus 194 ~V~~v~~~p~~~~l~s--~s~----------D~~i~~wd~~~~~~~~~~~~h~------~~v~~~~~~-----~~g~~l~ 250 (410)
T 1vyh_C 194 NVSSVSIMPNGDHIVS--ASR----------DKTIKMWEVQTGYCVKTFTGHR------EWVRMVRPN-----QDGTLIA 250 (410)
T ss_dssp CEEEEEECSSSSEEEE--EET----------TSEEEEEETTTCCEEEEEECCS------SCEEEEEEC-----TTSSEEE
T ss_pred CEEEEEEeCCCCEEEE--EeC----------CCeEEEEECCCCcEEEEEeCCC------ccEEEEEEC-----CCCCEEE
Confidence 4666777777664432 211 2359999999999888765322 234445543 2333445
Q ss_pred ecCCCCeEEEEEcCCCeEEEEc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~ 570 (1228)
+=+....|.+||+.+++.-..+
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~~ 272 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAEL 272 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCeEEEEECCCCceeeEe
Confidence 5455678999999988765543
No 245
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=46.03 E-value=44 Score=41.27 Aligned_cols=63 Identities=11% Similarity=-0.030 Sum_probs=44.6
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-----CCeEEEEECCCCe-EEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDFFKNT-SYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----~~gLIVydl~~g~-swRv~ 1020 (1228)
+|+++|.+|++++-++.++.+...........+|+ ++.+|+...+ .+.|..||.++|+ .|++.
T Consensus 139 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~------~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~ 207 (677)
T 1kb0_A 139 RLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVF------KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWF 207 (677)
T ss_dssp EEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEE------TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEeeecCCcCcCcCcccccCcEEE------CCEEEEEecccccCCCCEEEEEECCCCcEEEEec
Confidence 79999999999999998862211111222334454 4688998764 4789999999887 68876
No 246
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=45.73 E-value=3.2e+02 Score=29.56 Aligned_cols=192 Identities=8% Similarity=0.026 Sum_probs=98.9
Q ss_pred EEEEEEEeCCC-cEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEE
Q psy11781 469 SVFRMSVDKCD-RLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAY 547 (1228)
Q Consensus 469 sV~~v~iD~~g-RLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aY 547 (1228)
.|..+...+++ ++.+.=.. .-.|.+||+.+++....+.+.. ....+..+.+.. .++...
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~------------dg~i~iwd~~~~~~~~~~~~~~----h~~~v~~~~~~~----~~~~~l 134 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSK------------GGDIILWDYDVQNKTSFIQGMG----PGDAITGMKFNQ----FNTNQL 134 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEB------------TSCEEEEETTSTTCEEEECCCS----TTCBEEEEEEET----TEEEEE
T ss_pred CEEEEEECCCCCCEEEEEcC------------CCeEEEEeCCCcccceeeecCC----cCCceeEEEeCC----CCCCEE
Confidence 46666777766 44333111 1238999999998877665421 224466666641 133333
Q ss_pred EecCCCCeEEEEEcCCCeEEEEcCCCCCcCCCCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCc
Q psy11781 548 VNDVFRYGLIVYDFFKNTSYRLTHPYMYPEPTQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGT 627 (1228)
Q Consensus 548 ItDs~~~gLIVyDl~~g~swRv~~~s~~pdP~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1228)
++=+....|.+||+.++....+....-. ...+..++++|
T Consensus 135 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----------------~~~v~~~~~~~------------------------ 173 (383)
T 3ei3_B 135 FVSSIRGATTLRDFSGSVIQVFAKTDSW-----------------DYWYCCVDVSV------------------------ 173 (383)
T ss_dssp EEEETTTEEEEEETTSCEEEEEECCCCS-----------------SCCEEEEEEET------------------------
T ss_pred EEEeCCCEEEEEECCCCceEEEeccCCC-----------------CCCeEEEEECC------------------------
Confidence 3334567899999997555444321000 11234455554
Q ss_pred cccccccCCCceEEEeeCCCCceEEEechhhcCCCCCCCccccccceEeeccccccccccceEEccCCc-EEEEcCCCCe
Q psy11781 628 NVDKTIRDDQRYMYFHSLSSNRHYYVSTTDLRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGV-MFYNLVTKHS 706 (1228)
Q Consensus 628 ~~~i~is~d~r~LYf~~lss~~ly~V~T~~Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~-LY~t~~~~~a 706 (1228)
+++.|......+ .++-.+. +... ..+..+.. +.-..++++.+|. ++++-...+.
T Consensus 174 --------~~~~l~~~~~d~-~i~i~d~---~~~~----------~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d~~ 228 (383)
T 3ei3_B 174 --------SRQMLATGDSTG-RLLLLGL---DGHE----------IFKEKLHK---AKVTHAEFNPRCDWLMATSSVDAT 228 (383)
T ss_dssp --------TTTEEEEEETTS-EEEEEET---TSCE----------EEEEECSS---SCEEEEEECSSCTTEEEEEETTSE
T ss_pred --------CCCEEEEECCCC-CEEEEEC---CCCE----------EEEeccCC---CcEEEEEECCCCCCEEEEEeCCCE
Confidence 444454443333 2333321 1111 01111222 2356677888887 8888788889
Q ss_pred EEEEeCCCCccCCCCeeEEEecCCceecCCceEEcC-CCcEEEEe
Q psy11781 707 VGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDP-NDNIWILS 750 (1228)
Q Consensus 707 I~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~-dg~LyVls 750 (1228)
|..||..+..-...-+..+. . -.....+++.+ +|.+.+..
T Consensus 229 i~iwd~~~~~~~~~~~~~~~-~---~~~v~~~~~s~~~~~~l~~~ 269 (383)
T 3ei3_B 229 VKLWDLRNIKDKNSYIAEMP-H---EKPVNAAYFNPTDSTKLLTT 269 (383)
T ss_dssp EEEEEGGGCCSTTCEEEEEE-C---SSCEEEEEECTTTSCEEEEE
T ss_pred EEEEeCCCCCcccceEEEec-C---CCceEEEEEcCCCCCEEEEE
Confidence 99999972111111112221 1 13456777877 77644433
No 247
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=44.54 E-value=3.7e+02 Score=29.95 Aligned_cols=79 Identities=15% Similarity=0.130 Sum_probs=47.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+...+.+.+-+. |..+ -.|.+||+.++++++++.-.. ..+..+.+.. ++.++ +
T Consensus 110 ~V~~~~~~p~~~~l~s--~s~D----------g~i~vwd~~~~~~~~~l~~h~------~~V~~v~~~~----~~~~l-~ 166 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVS--ASED----------ATIKVWDYETGDFERTLKGHT------DSVQDISFDH----SGKLL-A 166 (410)
T ss_dssp CEEEEEECSSSSEEEE--EESS----------SCEEEEETTTCCCCEEECCCS------SCEEEEEECT----TSSEE-E
T ss_pred cEEEEEEcCCCCEEEE--EeCC----------CeEEEEECCCCcEEEEEeccC------CcEEEEEEcC----CCCEE-E
Confidence 4666667666664332 2222 268899999998887665432 2345555542 23333 3
Q ss_pred EcCCCCeEEEEECCCCeEEEee
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~ 1020 (1228)
+=+..+.|.|||+.+++.-+..
T Consensus 167 sgs~D~~i~iwd~~~~~~~~~~ 188 (410)
T 1vyh_C 167 SCSADMTIKLWDFQGFECIRTM 188 (410)
T ss_dssp EEETTSCCCEEETTSSCEEECC
T ss_pred EEeCCCeEEEEeCCCCceeEEE
Confidence 3334567889999988776654
No 248
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=44.04 E-value=90 Score=37.64 Aligned_cols=62 Identities=13% Similarity=0.114 Sum_probs=44.5
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-----CCeEEEEECCCCe-EEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDFFKNT-SYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----~~gLIVydl~~g~-swRv~ 1020 (1228)
+|+++|++|++++-++.++.... ........+|+ ++.+|+...+ .+.|..+|.++|+ .||+.
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~-~~~~~~~P~v~------~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKV-GSTLTQAPFVA------KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGG-TCBCCSCCEEE------TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCc-cceeccCCEEE------CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 79999999999999999865211 11222334444 4678998764 5789999999876 68875
No 249
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=43.75 E-value=3.2e+02 Score=28.91 Aligned_cols=78 Identities=6% Similarity=0.070 Sum_probs=48.1
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+...++|.+-+. |..+ -+|.+||+.+++.++.+..... ....+.+.. ++.++..
T Consensus 15 ~V~~~~fsp~~~~l~s--~~~d----------g~v~lWd~~~~~~~~~~~~~~~------~v~~~~~~~----~~~~l~s 72 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLT--TLYS----------GRVELWNYETQVEVRSIQVTET------PVRAGKFIA----RKNWIIV 72 (304)
T ss_dssp CEEEEEECSSSSEEEE--EETT----------SEEEEEETTTTEEEEEEECCSS------CEEEEEEEG----GGTEEEE
T ss_pred ceEEEEECCCCCEEEE--EcCC----------CcEEEEECCCCceeEEeeccCC------cEEEEEEeC----CCCEEEE
Confidence 3666777777765432 2222 2799999999999988876443 233344431 2334433
Q ss_pred EcCCCCeEEEEECCCCeEEEe
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv 1019 (1228)
+ +..+.|.|||+.+++..+.
T Consensus 73 ~-s~d~~i~vwd~~~~~~~~~ 92 (304)
T 2ynn_A 73 G-SDDFRIRVFNYNTGEKVVD 92 (304)
T ss_dssp E-ETTSEEEEEETTTCCEEEE
T ss_pred E-CCCCEEEEEECCCCcEEEE
Confidence 3 3356899999998876543
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=43.74 E-value=78 Score=38.66 Aligned_cols=81 Identities=14% Similarity=0.082 Sum_probs=54.3
Q ss_pred CEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCe-EEEeecC-CcCcCC
Q psy11781 951 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-SYRLTHP-YMYPEP 1028 (1228)
Q Consensus 951 pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~-swRv~h~-s~~pdP 1028 (1228)
-.|.+||++|++++-+++.+.... + .-+++ .++.+|+... .+.|..||.++|+ -|+..-+ .....|
T Consensus 453 G~l~A~D~~tG~~~W~~~~~~~~~---~--g~~~t------agg~vf~gt~-dg~l~A~D~~tG~~lW~~~l~~g~~~~P 520 (599)
T 1w6s_A 453 GQIKAYNAITGDYKWEKMERFAVW---G--GTMAT------AGDLVFYGTL-DGYLKARDSDTGDLLWKFKIPSGAIGYP 520 (599)
T ss_dssp EEEEEECTTTCCEEEEEEESSCCC---S--BCEEE------TTTEEEEECT-TSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred CeEEEEECCCCCEEeEecCCCCcc---C--cceEe------cCCEEEEECC-CCeEEEEECCCCCEEEEeeCCCCcEecc
Confidence 379999999999998887643210 1 11333 3688999754 5689999999988 5777632 334444
Q ss_pred CcceeEEcCEEEEe-eCC
Q psy11781 1029 TQSTYILDNLKFRW-VDG 1045 (1228)
Q Consensus 1029 ~~~~~~i~G~~f~~-~dG 1045 (1228)
..+.++|+.+-. .+|
T Consensus 521 --~~y~~~G~qyv~~~~G 536 (599)
T 1w6s_A 521 --MTYTHKGTQYVAIYYG 536 (599)
T ss_dssp --EEEEETTEEEEEEEEC
T ss_pred --EEEEeCCEEEEEEEcc
Confidence 345589987643 445
No 251
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=43.50 E-value=2.7e+02 Score=31.25 Aligned_cols=27 Identities=11% Similarity=0.294 Sum_probs=22.3
Q ss_pred cceEEccCCcEEEEcCCCCeEEEEeCC
Q psy11781 687 SASAINSNGVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 687 ~G~a~D~~G~LY~t~~~~~aI~~wn~~ 713 (1228)
..++++.+|...++-...+.|..||..
T Consensus 300 ~~~~~spdg~~l~s~~~D~~i~iwd~~ 326 (435)
T 4e54_B 300 NAACFSPDGARLLTTDQKSEIRVYSAS 326 (435)
T ss_dssp EECCBCTTSSEEEEEESSSCEEEEESS
T ss_pred cceeECCCCCeeEEEcCCCEEEEEECC
Confidence 455667888888888888999999987
No 252
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.18 E-value=47 Score=40.65 Aligned_cols=119 Identities=14% Similarity=0.218 Sum_probs=75.6
Q ss_pred ceecCCCceEEEEeCCCCceEEEecchhcC----CcccCCccccccceEEeccccCCCCcccEEEcCCCcEEEEecCCCe
Q psy11781 1081 KTIRDDQRYMYFHSLSSNRHYYVSTTDLRN----SSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHS 1156 (1228)
Q Consensus 1081 i~ls~d~r~LYf~plss~~ly~V~T~~Lr~----~~~~~~~~~~~~~v~~lG~rg~~sqs~g~~~D~~G~LY~t~~~~~a 1156 (1228)
+-++|||+++|-.-.-|.++..++.+-+.+ .-+ ...+.+..+++ +|.. +--.++|.+|+.|.++.-.+.
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~-~~~~~~~ae~e-~GlG-----PlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA-DPRDVIVGEPE-LGLG-----PLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS-CGGGGEEECCB-CCSC-----EEEEEECSSSEEEEEETTTTE
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc-CcccceEeecc-CCCc-----ccEEEECCCCceEeeeeecce
Confidence 468899999999999999999999876543 111 01122333444 4532 345789999999999999999
Q ss_pred EEEEeCCCCc---cccCCeeEEEecCCceec-CCceEE------eCCCcEEEEeCCchh--hhc
Q psy11781 1157 VGCWNTKTKV---YLPQTQDIVQTSRDILNF-PNDLKI------DPNDNIWILSNKLHQ--YLY 1208 (1228)
Q Consensus 1157 I~~wn~~~~~---~~~~n~~~v~~~~~~L~w-Pd~l~i------d~dg~Lyvlsn~l~~--~~~ 1208 (1228)
|.+||.+ +. |..+...-|.+. -...+ |-.+.. +++|.-.+.-|+|-+ |+.
T Consensus 401 vvkWni~-~a~~~~~g~~~~~v~~k-~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~ 462 (638)
T 3sbq_A 401 VVKWNME-EAVRAYKGEKVNYIKQK-LDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLP 462 (638)
T ss_dssp EEEEEHH-HHHHHHTTCCCCCEEEE-EECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCC
T ss_pred EEEEecc-HHHHHhcCccCCeeeec-cccccCCcccccCCCccCCCCccEEEEecccccccCcC
Confidence 9999987 43 433333222211 11222 222322 567776677788874 653
No 253
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=42.63 E-value=3.6e+02 Score=29.18 Aligned_cols=58 Identities=9% Similarity=-0.001 Sum_probs=34.0
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEE
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWI 748 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyV 748 (1228)
-..++...+|.++++-...+.|..|+..++. ...+..-...-....++++.++|.+.+
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~-----~~~~~~~~~h~~~v~~l~~sp~g~~l~ 210 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDD-----WVCCATLEGHESTVWSLAFDPSGQRLA 210 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCC-----EEEEEEecCCCCceEEEEECCCCCEEE
Confidence 3556777788888887788889999986221 111111111112345677888876433
No 254
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=42.45 E-value=3.3e+02 Score=28.69 Aligned_cols=59 Identities=12% Similarity=0.180 Sum_probs=39.3
Q ss_pred cccEEEcCCCcEEEEecCCCeEEEEeCCCCccccCCeeEEEecCCceecCCceEEeCCCcEEEEeC
Q psy11781 1136 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILSN 1201 (1228)
Q Consensus 1136 s~g~~~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~~v~~~~~~L~wPd~l~id~dg~Lyvlsn 1201 (1228)
...++++.+|.++++--....|..||..++. .+..-...-....++++.++|.+.++++
T Consensus 276 v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 276 VNGIAFHPVHGTLATVGSDGRFSFWDKDART-------KLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEETTTTE-------EEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred eEEEEEecCCCEEEEEccCCeEEEEECCCCc-------EEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 4567888888877777788899999998321 2221112223567788889987655553
No 255
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=41.79 E-value=85 Score=34.25 Aligned_cols=80 Identities=9% Similarity=-0.032 Sum_probs=48.0
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCccccc---------------CCCceeE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFE---------------GSLFSNI 533 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~---------------~S~l~di 533 (1228)
.|..+...+++++.+.=. . .-+|.+||+++++.++++..+..-... ...+..+
T Consensus 293 ~v~~~~~~~~~~~l~~~~--~----------dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~ 360 (397)
T 1sq9_A 293 WVMSLSFNDSGETLCSAG--W----------DGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV 360 (397)
T ss_dssp CEEEEEECSSSSEEEEEE--T----------TSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE
T ss_pred cEEEEEECCCCCEEEEEe--C----------CCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE
Confidence 455667776666544311 1 125999999999999988853221111 4556677
Q ss_pred EEEeecCCCCe----------EEEEecCCCCeEEEEEcCCCe
Q psy11781 534 VTEVVEDCDHV----------FAYVNDVFRYGLIVYDFFKNT 565 (1228)
Q Consensus 534 ~VD~~~~c~~~----------~aYItDs~~~gLIVyDl~~g~ 565 (1228)
.+.. ++ ...++=...+.|.|||+.+|+
T Consensus 361 ~~~~-----~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 361 KFLK-----KGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEC-----TTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred Eecc-----ccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 7762 22 233444456789999998874
No 256
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=41.36 E-value=3.9e+02 Score=29.29 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=38.4
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEe-cCCceecCCceEEcCCCcEEEEe
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQT-SRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~-~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
...+++..+|.+.++-...+.|..||..+++ ....+.. ...--.....+++.++|.+.+..
T Consensus 301 v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~----~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 301 VTSVAFSISGRLLFAGYSNGDCYVWDTLLAE----MVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp CSEEEECSSSSEEEEECTTSCEEEEETTTCC----EEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred eEEEEECCCCCEEEEEECCCCEEEEECCCCc----eEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 4567888899999998889999999986222 1111110 01112346678888888654443
No 257
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=39.30 E-value=3.1e+02 Score=33.27 Aligned_cols=16 Identities=19% Similarity=0.335 Sum_probs=14.5
Q ss_pred cccccCCCceEEEEec
Q psy11781 190 DKTIRDDQRYMYFHSL 205 (1228)
Q Consensus 190 ~~~~~~~~~~lYf~~l 205 (1228)
+++.|+||+.|||+..
T Consensus 172 ~~~wspDg~~l~~~~~ 187 (695)
T 2bkl_A 172 TPKWTPDSKGFYYEWL 187 (695)
T ss_dssp CCEECTTSSEEEEEEC
T ss_pred ceEEecCCCEEEEEEe
Confidence 7899999999999876
No 258
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=39.13 E-value=6.1e+02 Score=30.89 Aligned_cols=27 Identities=7% Similarity=-0.025 Sum_probs=19.9
Q ss_pred CCeEEEEecCCC---CeEEEEEcCCCeEEE
Q psy11781 542 DHVFAYVNDVFR---YGLIVYDFFKNTSYR 568 (1228)
Q Consensus 542 ~~~~aYItDs~~---~gLIVyDl~~g~swR 568 (1228)
++..||.+|.++ ..|.|+|+.+|+..+
T Consensus 174 G~~la~~~~~~G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 174 GRLLAYSVQDGGSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp SSEEEEEEEETTCSEEEEEEEETTTCCEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCC
Confidence 456788877543 479999999987644
No 259
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=39.07 E-value=4.5e+02 Score=29.29 Aligned_cols=57 Identities=12% Similarity=0.036 Sum_probs=38.4
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
.|.+||+++++.++++.- ....+..+.+. .++.+ ++=+..+.|.|||+.+++.-+..
T Consensus 143 ~i~vwd~~~~~~~~~~~~------h~~~V~~l~~~-----~~~~l-~s~s~dg~i~vwd~~~~~~~~~~ 199 (464)
T 3v7d_B 143 MIRVYDSINKKFLLQLSG------HDGGVWALKYA-----HGGIL-VSGSTDRTVRVWDIKKGCCTHVF 199 (464)
T ss_dssp CEEEEETTTTEEEEEECC------CSSCEEEEEEC-----STTEE-EEEETTSCEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCcEEEEEeC------CCcCEEEEEEc-----CCCEE-EEEeCCCCEEEEECCCCcEEEEE
Confidence 389999999998876642 22345566653 33443 44445678999999998766554
No 260
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=39.06 E-value=1.8e+02 Score=35.22 Aligned_cols=56 Identities=9% Similarity=0.061 Sum_probs=36.4
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEE
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYR 568 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swR 568 (1228)
.|.+||++++++++++.- ....+..+.+. .++...++=+..+.|.+||+.+++.-+
T Consensus 542 ~v~vwd~~~~~~~~~~~~------h~~~v~~v~~s-----pdg~~l~sg~~Dg~i~iwd~~~~~~~~ 597 (694)
T 3dm0_A 542 TVKVWNLSNCKLRSTLAG------HTGYVSTVAVS-----PDGSLCASGGKDGVVLLWDLAEGKKLY 597 (694)
T ss_dssp CEEEEETTTCCEEEEECC------CSSCEEEEEEC-----TTSSEEEEEETTSBCEEEETTTTEEEE
T ss_pred eEEEEECCCCcEEEEEcC------CCCCEEEEEEe-----CCCCEEEEEeCCCeEEEEECCCCceEE
Confidence 488899999888765432 12345666665 233344454556789999999987543
No 261
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=38.10 E-value=5.1e+02 Score=29.69 Aligned_cols=57 Identities=11% Similarity=0.191 Sum_probs=36.6
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEEe
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWILS 750 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVls 750 (1228)
-..++++.+|.+..+--....|..||.. +.. +..+..... -...+++.++|.+.+..
T Consensus 470 v~~~~~spd~~~las~~~d~~i~iw~~~-~~~----~~~~~~h~~---~v~~l~~s~dg~~l~s~ 526 (577)
T 2ymu_A 470 VRGVAFSPDGQTIASASDDKTVKLWNRN-GQL----LQTLTGHSS---SVRGVAFSPDGQTIASA 526 (577)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETT-SCE----EEEEECCSS---CEEEEEECTTSSCEEEE
T ss_pred EEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCE----EEEEeCCCC---CEEEEEEcCCCCEEEEE
Confidence 4567888889888888888899999986 432 222221121 23567777888644443
No 262
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=37.77 E-value=1e+02 Score=38.09 Aligned_cols=63 Identities=11% Similarity=-0.014 Sum_probs=42.5
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-----CCeEEEEECCCCe-EEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDFFKNT-SYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----~~gLIVydl~~g~-swRv~ 1020 (1228)
+|+++|.+|++++-++....+...........+|. ++.+|+.-.+ .+.|+.+|.++|+ .|++.
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~------~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 132 RLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV------NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE------TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE------CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 79999999999999888851111111112233343 4678886543 4689999999988 58875
No 263
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=36.50 E-value=68 Score=39.27 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=54.7
Q ss_pred ccccCCCceEEEeeCCCCceEEEechhhcC----CCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCe
Q psy11781 631 KTIRDDQRYMYFHSLSSNRHYYVSTTDLRN----SSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHS 706 (1228)
Q Consensus 631 i~is~d~r~LYf~~lss~~ly~V~T~~Lr~----~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~a 706 (1228)
+-++|||+++|..-.-|.++..++.+-+.+ +-+ ...+.+..+++ +| .| +--.++|.+|+.|.++.-...
T Consensus 328 v~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~-~~~~~~~ae~e-~G-lG----PlHt~Fd~~G~aYTtlfidSq 400 (638)
T 3sbq_A 328 CNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLA-DPRDVIVGEPE-LG-LG----PLHTTFDGRGNAYTTLFIDSQ 400 (638)
T ss_dssp EEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCS-CGGGGEEECCB-CC-SC----EEEEEECSSSEEEEEETTTTE
T ss_pred eeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhcccc-CcccceEeecc-CC-Cc----ccEEEECCCCceEeeeeecce
Confidence 347899999999999999988888775433 211 01111233444 44 23 467899999999999999999
Q ss_pred EEEEeCC
Q psy11781 707 VGCWNTK 713 (1228)
Q Consensus 707 I~~wn~~ 713 (1228)
|.+||.+
T Consensus 401 vvkWni~ 407 (638)
T 3sbq_A 401 VVKWNME 407 (638)
T ss_dssp EEEEEHH
T ss_pred EEEEecc
Confidence 9999997
No 264
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=36.47 E-value=6.7e+02 Score=30.55 Aligned_cols=27 Identities=7% Similarity=-0.025 Sum_probs=19.8
Q ss_pred CceEEEEEcCCC---CeEEEEECCCCeEEE
Q psy11781 992 DHVFAYVNDVFR---YGLIVYDFFKNTSYR 1018 (1228)
Q Consensus 992 ~~~~aYItD~~~---~gLIVydl~~g~swR 1018 (1228)
.+..||..|.++ ..|.|+|+++|+..+
T Consensus 174 G~~la~~~~~~G~e~~~i~v~dl~tg~~~~ 203 (741)
T 1yr2_A 174 GRLLAYSVQDGGSDWRTVKFVGVADGKPLA 203 (741)
T ss_dssp SSEEEEEEEETTCSEEEEEEEETTTCCEEE
T ss_pred CCEEEEEEcCCCCceEEEEEEECCCCCCCC
Confidence 356788877643 469999999987644
No 265
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=36.28 E-value=49 Score=38.13 Aligned_cols=64 Identities=11% Similarity=0.071 Sum_probs=47.1
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcc-eeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLF-SNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l-~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~ 1020 (1228)
+|.++||++.+++++|+|..+=-..-..+ ..+-+ . +...+||++-..++|..+|.+.....++.
T Consensus 53 ~i~~iDL~~~kl~k~i~~ekEGPNgi~~~~~~~~i--~---~~DsI~i~~~~~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 53 DIVIFDIENQQIAKRIPLHKTGPNGLPAVFGSRPS--P---DSQYILVAQNNISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp EEEEEETTTTEEEEEEECBSSSTTBCTTCCCEEES--S---STTSEEEEEGGGTEEEEECTTCCEEEEEE
T ss_pred cEEEEECCCCceeeeeccccCCCCCcccceeeEEe--c---CCCEEEEEeCCcceEEEECCCceEEEEEe
Confidence 89999999999999999966521111112 12222 1 35678999998999999999999888875
No 266
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=35.60 E-value=4.2e+02 Score=28.00 Aligned_cols=76 Identities=7% Similarity=0.016 Sum_probs=41.5
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCC--cEEEEEECCCcccccCCCceeEEEEeecCCCCeEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTN--TLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 546 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td--~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~a 546 (1228)
.|..+...+++++-+. |..+ -.|.+||+.++ +.++++.- .......+.+.. +.++.++
T Consensus 13 ~v~~~~~s~~~~~l~~--~~~d----------g~i~iw~~~~~~~~~~~~~~~------h~~~v~~~~~~~--~~~~~~l 72 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLAT--CSSD----------KTIKIFEVEGETHKLIDTLTG------HEGPVWRVDWAH--PKFGTIL 72 (379)
T ss_dssp CEEEEEECSSSSEEEE--EETT----------SCEEEEEEETTEEEEEEEECC------CSSCEEEEEECC--GGGCSEE
T ss_pred cEEEEEEcCCCCEEEE--EECC----------CcEEEEecCCCcceeeeEecC------CCCcEEEEEeCC--CCCCCEE
Confidence 4666777777765442 2111 13888888743 44443322 123345555531 1113455
Q ss_pred EEecCCCCeEEEEEcCCCe
Q psy11781 547 YVNDVFRYGLIVYDFFKNT 565 (1228)
Q Consensus 547 YItDs~~~gLIVyDl~~g~ 565 (1228)
+.+. ..+.|.|||+.+++
T Consensus 73 ~s~~-~dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 73 ASCS-YDGKVLIWKEENGR 90 (379)
T ss_dssp EEEE-TTSCEEEEEEETTE
T ss_pred EEec-cCCEEEEEEcCCCc
Confidence 5544 35689999999986
No 267
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=35.46 E-value=2.1e+02 Score=30.47 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=48.3
Q ss_pred ceEEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEE
Q psy11781 467 LISVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 546 (1228)
Q Consensus 467 lvsV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~a 546 (1228)
+..+..+.+|..-.+|+....... .......|.++|+.+++..+ + .....+++. + .++..|
T Consensus 14 ~~~~~~~~~dG~~i~~~~~~~~~~-----~~~~~~~l~~~d~~~~~~~~-l----------~~~~~~~~S--p-Dg~~la 74 (347)
T 2gop_A 14 FAYLSDPRTKGELVAYVLTKANLK-----DNKYENTIVIENLKNNARRF-I----------ENATMPRIS--P-DGKKIA 74 (347)
T ss_dssp SCEEEEEEEETTEEEEEEEEEETT-----TTEEEEEEEEEETTTCCEEE-E----------ESCEEEEEC--T-TSSEEE
T ss_pred eEEcccceECCcEEEEEEeecCcc-----cCCccceEEEEeCCCCceEE-c----------ccCCCeEEC--C-CCCEEE
Confidence 444555555554445665443211 00123569999999987542 2 112334443 2 134577
Q ss_pred EEecCC---CCeEEEEEcCCCeEEEEc
Q psy11781 547 YVNDVF---RYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 547 YItDs~---~~gLIVyDl~~g~swRv~ 570 (1228)
|+++.. ...|.++|+.+++..++.
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~g~~~~l~ 101 (347)
T 2gop_A 75 FMRANEEKKVSEIWVADLETLSSKKIL 101 (347)
T ss_dssp EEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEeccCCCcceEEEEECCCCceEEEE
Confidence 777653 456999999998877765
No 268
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=34.89 E-value=6.6e+02 Score=30.06 Aligned_cols=79 Identities=11% Similarity=0.180 Sum_probs=47.2
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+.+.+++++-+ +|.. .-.|.+||+.+++.++++.-.. ..+..+.+.. ++.+ .+
T Consensus 432 ~v~~v~~s~~g~~l~--sgs~----------Dg~v~vwd~~~~~~~~~~~~h~------~~v~~~~~s~----~~~~-l~ 488 (694)
T 3dm0_A 432 FVEDVVLSSDGQFAL--SGSW----------DGELRLWDLAAGVSTRRFVGHT------KDVLSVAFSL----DNRQ-IV 488 (694)
T ss_dssp CEEEEEECTTSSEEE--EEET----------TSEEEEEETTTTEEEEEEECCS------SCEEEEEECT----TSSC-EE
T ss_pred cEEEEEECCCCCEEE--EEeC----------CCcEEEEECCCCcceeEEeCCC------CCEEEEEEeC----CCCE-EE
Confidence 355666666666544 2221 1359999999999887765322 2345555541 2222 34
Q ss_pred ecCCCCeEEEEEcCCCeEEEEc
Q psy11781 549 NDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~swRv~ 570 (1228)
|=+....|.|||......+.+.
T Consensus 489 s~s~D~~i~iwd~~~~~~~~~~ 510 (694)
T 3dm0_A 489 SASRDRTIKLWNTLGECKYTIS 510 (694)
T ss_dssp EEETTSCEEEECTTSCEEEEEC
T ss_pred EEeCCCEEEEEECCCCcceeec
Confidence 4445678899998776666554
No 269
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=32.96 E-value=4.6e+02 Score=27.67 Aligned_cols=76 Identities=7% Similarity=-0.021 Sum_probs=41.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCC--CcEEEEEECCCCcccCCCcceeeEEEeecCCCceEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKT--NTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFA 996 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~t--d~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~a 996 (1228)
.|..+....++++-+. |..+ -.|.+||+.+ .++++.+.-. ...+..+..... .++.++
T Consensus 13 ~v~~~~~s~~~~~l~~--~~~d----------g~i~iw~~~~~~~~~~~~~~~h------~~~v~~~~~~~~--~~~~~l 72 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLAT--CSSD----------KTIKIFEVEGETHKLIDTLTGH------EGPVWRVDWAHP--KFGTIL 72 (379)
T ss_dssp CEEEEEECSSSSEEEE--EETT----------SCEEEEEEETTEEEEEEEECCC------SSCEEEEEECCG--GGCSEE
T ss_pred cEEEEEEcCCCCEEEE--EECC----------CcEEEEecCCCcceeeeEecCC------CCcEEEEEeCCC--CCCCEE
Confidence 4666777777765442 2211 1588888874 4455443321 123444544311 113555
Q ss_pred EEEcCCCCeEEEEECCCCe
Q psy11781 997 YVNDVFRYGLIVYDFFKNT 1015 (1228)
Q Consensus 997 YItD~~~~gLIVydl~~g~ 1015 (1228)
+.+.. .+.|.|||+.+++
T Consensus 73 ~s~~~-dg~v~iwd~~~~~ 90 (379)
T 3jrp_A 73 ASCSY-DGKVLIWKEENGR 90 (379)
T ss_dssp EEEET-TSCEEEEEEETTE
T ss_pred EEecc-CCEEEEEEcCCCc
Confidence 55543 4679999999886
No 270
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=32.84 E-value=5.2e+02 Score=28.25 Aligned_cols=28 Identities=14% Similarity=0.238 Sum_probs=24.1
Q ss_pred ccceEEccCCcEEEEcCCCCeEEEEeCC
Q psy11781 686 ASASAINSNGVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 686 s~G~a~D~~G~LY~t~~~~~aI~~wn~~ 713 (1228)
-..+++..+|.+.++--..+.|..|+..
T Consensus 347 v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 347 ISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred eEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 4667888899999988889999999987
No 271
>3hx6_A Type 4 fimbrial biogenesis protein PILY1; beta propeller, pilus protein, cell adhesion; 2.10A {Pseudomonas aeruginosa}
Probab=32.76 E-value=81 Score=38.44 Aligned_cols=61 Identities=16% Similarity=0.201 Sum_probs=41.0
Q ss_pred CCCEEEEEECCCCcEEEEEECCCcccccCCCceeEE-EEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEcC
Q psy11781 499 CPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIV-TEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLTH 571 (1228)
Q Consensus 499 ~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~-VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~~ 571 (1228)
..++|+++|++|+++++++..+... ...+.|..++ +|...+---.+||..|.+ |..||+.-
T Consensus 221 ~~~~Lyv~d~~tG~li~~i~~~~~~-~~~~Gls~~~~~D~d~Dg~~D~~YaGDl~-----------GnlWRfDl 282 (570)
T 3hx6_A 221 DKAALLIIDMETGAITRKLEVTGRT-GVPNGLSSPRLADNNSDGVADYAYAGDLQ-----------GNLWRFDL 282 (570)
T ss_dssp CCEEEEEEETTTCCEEEEEEECCST-TSCCCEEEEEEECTTSSSBCCEEEEEETT-----------SEEEEEEC
T ss_pred CccEEEEEECCCCceEEEEecCCCC-ccCCccccceEEecCCCCceeEEEEEeCC-----------CcEEEEEc
Confidence 4689999999999999999987432 1234566554 553222223579999864 57777764
No 272
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=32.44 E-value=5e+02 Score=27.94 Aligned_cols=28 Identities=4% Similarity=0.055 Sum_probs=21.4
Q ss_pred cccEEEcCCCcEEEEecCCCeEEEEeCC
Q psy11781 1136 ASASAINSNGVMFYNLVTKHSVGCWNTK 1163 (1228)
Q Consensus 1136 s~g~~~D~~G~LY~t~~~~~aI~~wn~~ 1163 (1228)
...+++..+|.++++--....|..|+..
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 4456777788877777777889999876
No 273
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=32.15 E-value=1.7e+02 Score=35.45 Aligned_cols=77 Identities=8% Similarity=0.055 Sum_probs=51.0
Q ss_pred CEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCe-EEEEcCC-CCCcCC
Q psy11781 501 PKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNT-SYRLTHP-YMYPEP 578 (1228)
Q Consensus 501 PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~-swRv~~~-s~~pdP 578 (1228)
-.|.+||++|++++-++..+... .-..+++ .++.+|+.+. .+.|.+||.++|+ .|++..+ .....|
T Consensus 466 G~l~A~D~~tG~~~W~~~~~~~~-----~~g~~~t------agglvf~g~~-dg~l~A~D~~tG~~lW~~~~~~g~~a~P 533 (582)
T 1flg_A 466 GSLRAMDPVSGKVVWEHKEHLPL-----WAGVLAT------AGNLVFTGTG-DGYFKAFDAKSGKELWKFQTGSGIVSPP 533 (582)
T ss_dssp EEEEEECTTTCCEEEEEEESSCC-----CSCCEEE------TTTEEEEECT-TSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred ceEEEEECCCCCEEEEecCCCCC-----cccceEe------CCCEEEEECC-CCcEEEEECCCCCEEEEecCCCCcccCc
Confidence 36999999999999877764321 1112333 3678999764 5789999999885 6888754 223332
Q ss_pred CCcceEEcCeEee
Q psy11781 579 TQSTYILDNLKFR 591 (1228)
Q Consensus 579 ~~~~~~i~G~~f~ 591 (1228)
..+..+|+.+-
T Consensus 534 --~~y~~~G~qYv 544 (582)
T 1flg_A 534 --ITWEQDGEQYL 544 (582)
T ss_dssp --EEEEETTEEEE
T ss_pred --eEEEECCEEEE
Confidence 13447887654
No 274
>3s9j_A Member of DUF4221 family; 6-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.75A {Bacteroides vulgatus}
Probab=32.02 E-value=59 Score=37.46 Aligned_cols=78 Identities=12% Similarity=0.115 Sum_probs=56.1
Q ss_pred EeCCCcEEEEeCCCCCcccCcCccCCC--EEEEEECCCCcEEEEEECCCcccccCCCceeE--EEEeecCCCCeEEEEec
Q psy11781 475 VDKCDRLWIMDTGVTNILSSIQQLCPP--KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNI--VTEVVEDCDHVFAYVND 550 (1228)
Q Consensus 475 iD~~gRLWVLDtG~~~~~~~~~~~~~P--KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di--~VD~~~~c~~~~aYItD 550 (1228)
.|...-|..++.= .+ +|.+|||++.+++++|+|..+= ++ .+..+ .+.+. +..-+||++
T Consensus 36 ~~~k~yL~~~N~~------------~~~~~i~~iDL~~~kl~k~i~~ekEG--PN-gi~~~~~~~~i~---~~DsI~i~~ 97 (369)
T 3s9j_A 36 ENGKEYLHFENTQ------------KSLYDIVIFDIENQQIAKRIPLHKTG--PN-GLPAVFGSRPSP---DSQYILVAQ 97 (369)
T ss_dssp ETTEEEEEEEECS------------TTCCEEEEEETTTTEEEEEEECBSSS--TT-BCTTCCCEEESS---STTSEEEEE
T ss_pred cCCcEEEEEeCCC------------CCcCcEEEEECCCCceeeeeccccCC--CC-CcccceeeEEec---CCCEEEEEe
Confidence 4555567777763 24 6999999999999999997652 21 12222 23322 355699999
Q ss_pred CCCCeEEEEEcCCCeEEEEc
Q psy11781 551 VFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 551 s~~~gLIVyDl~~g~swRv~ 570 (1228)
-..++|.++|.......++.
T Consensus 98 ~~~~~i~l~n~~G~~~~k~~ 117 (369)
T 3s9j_A 98 NNISRLSSINSQGEIIRNYN 117 (369)
T ss_dssp GGGTEEEEECTTCCEEEEEE
T ss_pred CCcceEEEECCCceEEEEEe
Confidence 88899999999999888875
No 275
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=31.78 E-value=2.8e+02 Score=29.83 Aligned_cols=180 Identities=16% Similarity=0.223 Sum_probs=0.0
Q ss_pred EEEEEECCCCcEEEEEECCCccccc-CCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc--CCCCCcCC
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFE-GSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT--HPYMYPEP 578 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~-~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~--~~s~~pdP 578 (1228)
.|.+||+.+++....+..+...+.. ......+++. .++...++=+....|.+||+.+++..+.. |.
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~-----~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~------ 118 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALS-----QENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQ------ 118 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEEC-----SSTTEEEEEETTSEEEEEETTSSCEEEEEECCC------
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEEC-----CCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCC------
Q ss_pred CCcceEEcCeEeeecCCcceeecCcccCCcccCCCccccccccccccCccccccccCCCceEEEeeCCCCc-eEEEechh
Q psy11781 579 TQSTYILDNLKFRWVDGIFGMAISPELSGKYKRHPYEYYHYNVHHYNGTNVDKTIRDDQRYMYFHSLSSNR-HYYVSTTD 657 (1228)
Q Consensus 579 ~~~~~~i~G~~f~~~dGi~GIALsp~~~~~~~~~~~~~~~~~~~~~~~~~~~i~is~d~r~LYf~~lss~~-ly~V~T~~ 657 (1228)
..+..++++| +++.|.-...-+.- +|.+....
T Consensus 119 ---------------~~v~~v~~sp--------------------------------~~~~l~s~~~d~~i~~wd~~~~~ 151 (343)
T 2xzm_R 119 ---------------SEVYSVAFSP--------------------------------DNRQILSAGAEREIKLWNILGEC 151 (343)
T ss_dssp ---------------SCEEEEEECS--------------------------------STTEEEEEETTSCEEEEESSSCE
T ss_pred ---------------CcEEEEEECC--------------------------------CCCEEEEEcCCCEEEEEeccCCc
Q ss_pred hcCCCCCCCccccccceEeeccccccccccceEEccCCcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCc
Q psy11781 658 LRNSSRYVNSSDIDEYFHYLGSRFRNTQASASAINSNGVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPND 737 (1228)
Q Consensus 658 Lr~~~~~~~~~~~~~~v~~lG~~g~~~qs~G~a~D~~G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~ 737 (1228)
..... ........+..+.-.+ .......+...+.++++-...+.|..||.. ...+..-...-.....
T Consensus 152 ~~~~~---~~~~~~~~v~~~~~~~--~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~--------~~~~~~~~~h~~~v~~ 218 (343)
T 2xzm_R 152 KFSSA---EKENHSDWVSCVRYSP--IMKSANKVQPFAPYFASVGWDGRLKVWNTN--------FQIRYTFKAHESNVNH 218 (343)
T ss_dssp EEECC---TTTSCSSCEEEEEECC--CCCSCSCCCSSCCEEEEEETTSEEEEEETT--------TEEEEEEECCSSCEEE
T ss_pred eeeee---cccCCCceeeeeeecc--ccccccccCCCCCEEEEEcCCCEEEEEcCC--------CceeEEEcCccccceE
Q ss_pred eEEcCCCcEEEEecC
Q psy11781 738 LKIDPNDNIWILSNK 752 (1228)
Q Consensus 738 l~Id~dg~LyVlsnr 752 (1228)
+++.++|.+.+....
T Consensus 219 ~~~s~~g~~l~sgs~ 233 (343)
T 2xzm_R 219 LSISPNGKYIATGGK 233 (343)
T ss_dssp EEECTTSSEEEEEET
T ss_pred EEECCCCCEEEEEcC
No 276
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=31.46 E-value=1.2e+02 Score=31.72 Aligned_cols=60 Identities=7% Similarity=0.156 Sum_probs=41.1
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeEEEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~swRv~ 570 (1228)
+|.+||+.|+++++.+.+... ......+++.. ++.++ ++=+..+.|.+||+.+++.-+..
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~~----~~~~l-~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQP----GEYISSVAWIK----EGNYL-AVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEETTTCCEEEEEECCST----TCCEEEEEECT----TSSEE-EEEETTSEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCC----CCeEEEEEECC----CCCEE-EEEECCCcEEEeecCCceeEEEe
Confidence 489999999999998877432 23456666651 23333 34445678999999999876644
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=30.25 E-value=46 Score=37.47 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=34.5
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeE-EEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~s-wRv~ 1020 (1228)
.|.+||++|++++.++.. ..+. ...+++ ++.+|++.+..+.|..+|.++|+. |+..
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~~~~------s~p~~~------~g~~~v~~s~dg~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-DPVL------QVPTHV------EEPAFLPDPNDGSLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CCSC------CCC-----------CCEEECTTTCCEEEC-----CCSEECS
T ss_pred EEEEEECCCCCEEEEecC-CCce------ecceEc------CCCEEEEeCCCCEEEEEECCCCceeeeee
Confidence 799999999999998887 3321 122222 355778777778899999988864 7764
No 278
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=29.72 E-value=1.4e+02 Score=30.96 Aligned_cols=72 Identities=7% Similarity=0.017 Sum_probs=47.4
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCcccCcCccCCCEEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEE
Q psy11781 469 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 548 (1228)
Q Consensus 469 sV~~v~iD~~gRLWVLDtG~~~~~~~~~~~~~PKLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYI 548 (1228)
.|..+...++++|..... .-+|.+||++++++++++..+.. ....+.+. .++. ++
T Consensus 227 ~i~~~~~~~~~~l~~~~~-------------dg~v~iwd~~~~~~~~~~~~~~~------~i~~~~~~-----~~~~-~~ 281 (313)
T 3odt_A 227 FVYCIKLLPNGDIVSCGE-------------DRTVRIWSKENGSLKQVITLPAI------SIWSVDCM-----SNGD-II 281 (313)
T ss_dssp CEEEEEECTTSCEEEEET-------------TSEEEEECTTTCCEEEEEECSSS------CEEEEEEC-----TTSC-EE
T ss_pred eEEEEEEecCCCEEEEec-------------CCEEEEEECCCCceeEEEeccCc------eEEEEEEc-----cCCC-EE
Confidence 356777777777554332 13499999999999988876542 35556664 2222 44
Q ss_pred ecCCCCeEEEEEcCCCe
Q psy11781 549 NDVFRYGLIVYDFFKNT 565 (1228)
Q Consensus 549 tDs~~~gLIVyDl~~g~ 565 (1228)
+=...+.|.+||+.+++
T Consensus 282 ~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEETTSCEEEEESCGGG
T ss_pred EEeCCCcEEEEeCCCCc
Confidence 44456789999998864
No 279
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=28.55 E-value=1.5e+02 Score=30.94 Aligned_cols=60 Identities=8% Similarity=0.176 Sum_probs=41.3
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv~ 1020 (1228)
+|.+||+.|+++++.+.+... ......+.... ++.++..+ +..+.|.+||+++++..+..
T Consensus 46 tV~iWd~~tg~~~~~~~~~~~----~~~V~~v~~~~----~~~~l~sg-s~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQP----GEYISSVAWIK----EGNYLAVG-TSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp EEEEEETTTCCEEEEEECCST----TCCEEEEEECT----TSSEEEEE-ETTSEEEEEETTTTEEEEEE
T ss_pred EEEEEECCCCCEEEEEEecCC----CCeEEEEEECC----CCCEEEEE-ECCCcEEEeecCCceeEEEe
Confidence 689999999999998887442 23355555542 23444333 34568999999999887755
No 280
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=28.15 E-value=1.7e+02 Score=30.28 Aligned_cols=73 Identities=7% Similarity=0.029 Sum_probs=46.9
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+...++++|..... + -+|.+||++++++++++..+.. .+..+.+.. ++. ++
T Consensus 227 ~i~~~~~~~~~~l~~~~~---d----------g~v~iwd~~~~~~~~~~~~~~~------~i~~~~~~~----~~~--~~ 281 (313)
T 3odt_A 227 FVYCIKLLPNGDIVSCGE---D----------RTVRIWSKENGSLKQVITLPAI------SIWSVDCMS----NGD--II 281 (313)
T ss_dssp CEEEEEECTTSCEEEEET---T----------SEEEEECTTTCCEEEEEECSSS------CEEEEEECT----TSC--EE
T ss_pred eEEEEEEecCCCEEEEec---C----------CEEEEEECCCCceeEEEeccCc------eEEEEEEcc----CCC--EE
Confidence 356677777776554321 1 2799999999999998877543 345555532 122 34
Q ss_pred EcCCCCeEEEEECCCCeE
Q psy11781 999 NDVFRYGLIVYDFFKNTS 1016 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~s 1016 (1228)
+=...+.|.+||+.+++.
T Consensus 282 ~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 282 VGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp EEETTSCEEEEESCGGGC
T ss_pred EEeCCCcEEEEeCCCCce
Confidence 433456899999987643
No 281
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=27.88 E-value=8.8e+02 Score=29.30 Aligned_cols=41 Identities=10% Similarity=0.202 Sum_probs=30.6
Q ss_pred cceEEEEEEEeCCCc--EEEEeCCCCCccccccccCCCEEEEEECCCCcEEE
Q psy11781 916 SLISVFRMSVDKCDR--LWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIR 965 (1228)
Q Consensus 916 ~lvSV~~v~iD~~gr--LWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir 965 (1228)
+..++-++.+-++|+ +|.+|.+-.+ ...|.++|+.|++.+.
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~---------~~~i~v~dl~tg~~~~ 169 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSD---------WREIHLMDVESKQPLE 169 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCC---------EEEEEEEETTTCSEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCc---------eEEEEEEECCCCCCCc
Confidence 445888888988887 6678865432 1389999999999764
No 282
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=27.74 E-value=51 Score=37.09 Aligned_cols=56 Identities=11% Similarity=0.011 Sum_probs=33.8
Q ss_pred EEEEEECCCCcEEEEEECCCcccccCCCceeEEEEeecCCCCeEEEEecCCCCeEEEEEcCCCeE-EEEc
Q psy11781 502 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTS-YRLT 570 (1228)
Q Consensus 502 KLvvfDL~td~vi~~y~~p~~v~~~~S~l~di~VD~~~~c~~~~aYItDs~~~gLIVyDl~~g~s-wRv~ 570 (1228)
.|.+||++|++++.++.. ..+. ...+++ ++.+|++.+..+.|..+|.++|+. |+..
T Consensus 20 ~v~a~d~~tG~~~W~~~~-~~~~------s~p~~~------~g~~~v~~s~dg~l~a~d~~tG~~~w~~~ 76 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE-DPVL------QVPTHV------EEPAFLPDPNDGSLYTLGSKNNEGLTKLP 76 (369)
T ss_dssp EEEEEETTTCCEEEEEEC-CCSC------CCC-----------CCEEECTTTCCEEEC-----CCSEECS
T ss_pred EEEEEECCCCCEEEEecC-CCce------ecceEc------CCCEEEEeCCCCEEEEEECCCCceeeeee
Confidence 499999999999988887 3321 222332 345778777778899999988764 6654
No 283
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=26.31 E-value=6.2e+02 Score=27.01 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=37.6
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCCCCeEEEEECCCCeEEEe
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVFRYGLIVYDFFKNTSYRL 1019 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~~~gLIVydl~~g~swRv 1019 (1228)
++.+||++++++++.+.++.. ..+..+.+... .++.++. +=+..+.|.+||+.+++..++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~-----~~v~~~~~~~~--~~~~~l~-s~s~dg~i~~wd~~~~~~~~~ 164 (343)
T 3lrv_A 105 QITILDSKTNKVLREIEVDSA-----NEIIYMYGHNE--VNTEYFI-WADNRGTIGFQSYEDDSQYIV 164 (343)
T ss_dssp EEEEEETTTCCEEEEEECCCS-----SCEEEEECCC-----CCEEE-EEETTCCEEEEESSSSCEEEE
T ss_pred ceEEeecCCcceeEEeecCCC-----CCEEEEEcCCC--CCCCEEE-EEeCCCcEEEEECCCCcEEEE
Confidence 677889999999988887542 23444544320 0223333 323456899999999887554
No 284
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=26.18 E-value=1.5e+02 Score=36.26 Aligned_cols=62 Identities=13% Similarity=0.053 Sum_probs=43.7
Q ss_pred EEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEEEcCC-----CCeEEEEECCCCe-EEEee
Q psy11781 952 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-----RYGLIVYDFFKNT-SYRLT 1020 (1228)
Q Consensus 952 KLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYItD~~-----~~gLIVydl~~g~-swRv~ 1020 (1228)
+|+++|.+|++++-++.++..- .........+|. ++.+|+.-.+ .+.|..||.++|+ .||..
T Consensus 132 ~l~AlDa~TG~~~W~~~~~~~~-~~~~~~ssP~v~------~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 132 NVAALNAETGETVWKVENSDIK-VGSTLTIAPYVV------KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp EEEEEETTTCCEEEEEECCCGG-GTCBCCSCCEEE------TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEeecCCCCC-ccceeecCCEEE------CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 7999999999999999886521 111222334443 3578887642 5789999999887 58876
No 285
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=23.04 E-value=1.1e+03 Score=28.74 Aligned_cols=62 Identities=8% Similarity=0.086 Sum_probs=36.7
Q ss_pred ccceEEccC---CcEEEEcCCCCeEEEEeCCCCccCCCCeeEEEecCCceecCCceEEcCCCcEEEE
Q psy11781 686 ASASAINSN---GVMFYNLVTKHSVGCWNTKTKVYLPQTQDIVQTSRDILNFPNDLKIDPNDNIWIL 749 (1228)
Q Consensus 686 s~G~a~D~~---G~LY~t~~~~~aI~~wn~~~~~~~~~n~~iV~~~d~~L~wPd~l~Id~dg~LyVl 749 (1228)
-.++++..+ |.++++-...+.|..||..++.- ... ..+......-....++++.++|.+.++
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~-~~~-~~~~~~~~~~~~v~~l~~spdg~~l~s 271 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQG-PWK-KTLLKEEKFPDVLWRASWSLSGNVLAL 271 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSS-CCB-CCBSSSSCCSSCCCCEEECTTTCCEEE
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCC-cce-eEEeccCCCCCceEEEEEcCCCCEEEE
Confidence 566777777 88888888889999999972211 000 111111111234567788888764443
No 286
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=21.24 E-value=1.2e+03 Score=28.45 Aligned_cols=20 Identities=15% Similarity=0.200 Sum_probs=16.4
Q ss_pred CCcEEEEcCCCCeEEEEeCC
Q psy11781 694 NGVMFYNLVTKHSVGCWNTK 713 (1228)
Q Consensus 694 ~G~LY~t~~~~~aI~~wn~~ 713 (1228)
+|.++++-...+.|..||..
T Consensus 169 d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEE
T ss_pred CCCEEEEEECCCeEEEEecc
Confidence 57777777788889999986
No 287
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=20.71 E-value=3.1e+02 Score=33.52 Aligned_cols=79 Identities=14% Similarity=0.103 Sum_probs=42.7
Q ss_pred eEEEEEccCCcEEEEEEcCCcccccCCcccceEEEEeecCCceEEEEeeCC-------cceEEEEEccCCceeee-ec--
Q psy11781 62 KIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYVNDVF-------RYGLIVYDFFKNTSYRL-TH-- 131 (1228)
Q Consensus 62 kl~~~dl~t~~~~~~~~~p~~~~~~~s~~~~i~~d~~~~~~~~~aYi~D~~-------~~g~iv~dl~~~~swR~-~h-- 131 (1228)
.|..+|++|++....+.-......... .+++. ..--|+-+||-++.. .--+.+||+.+|+..++ .|
T Consensus 37 ~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~ 112 (740)
T 4a5s_A 37 NILVFNAEYGNSSVFLENSTFDEFGHS-INDYS---ISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPN 112 (740)
T ss_dssp EEEEEETTTCCEEEEECTTTTTTCCSC-CCEEE---ECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCT
T ss_pred cEEEEECCCCceEEEEechhhhhhccc-ccceE---ECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCC
Confidence 677788888876444332221111110 11121 233366778877742 24566999999998877 32
Q ss_pred ----CccccCCCcccee
Q psy11781 132 ----PYMYPEPTQSTYI 144 (1228)
Q Consensus 132 ----~~~~~~p~~~~~~ 144 (1228)
+.+.||-..+-|.
T Consensus 113 ~~~~~~~SPdG~~la~~ 129 (740)
T 4a5s_A 113 NTQWVTWSPVGHKLAYV 129 (740)
T ss_dssp TEEEEEECSSTTCEEEE
T ss_pred cceeeEECCCCCEEEEE
Confidence 4455665555333
No 288
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=20.46 E-value=4.3e+02 Score=29.15 Aligned_cols=84 Identities=18% Similarity=0.241 Sum_probs=52.3
Q ss_pred EEEEEEEeCCCcEEEEeCCCCCccccccccCCCEEEEEECCCCcEEEEEECCCCcccCCCcceeeEEEeecCCCceEEEE
Q psy11781 919 SVFRMSVDKCDRLWIMDTGVTNILSSIQQLCPPKIMVFDLKTNTLIRKYILPTAQVFEGSLFSNIVTEVVEDCDHVFAYV 998 (1228)
Q Consensus 919 SV~~v~iD~~grLWVLDtG~~~~~~~~~~~~~pKLvvfDL~td~lir~y~~p~~~~~~~S~l~di~VD~~~~c~~~~aYI 998 (1228)
.|..+..++++++-+. |..+ -.|.+||+++++.++++.++.. ..+..+.+..... .++...+
T Consensus 216 ~v~~~~~s~~~~~l~s--~~~d----------g~i~iwd~~~~~~~~~~~~~~~-----~~v~~~~~~~~~s-~~~~~l~ 277 (437)
T 3gre_A 216 AVSSICIDEECCVLIL--GTTR----------GIIDIWDIRFNVLIRSWSFGDH-----APITHVEVCQFYG-KNSVIVV 277 (437)
T ss_dssp CEEEEEECTTSCEEEE--EETT----------SCEEEEETTTTEEEEEEBCTTC-----EEEEEEEECTTTC-TTEEEEE
T ss_pred ceEEEEECCCCCEEEE--EcCC----------CeEEEEEcCCccEEEEEecCCC-----CceEEEEeccccC-CCccEEE
Confidence 4666677777765543 2211 1589999999999998877543 2344454432111 2343444
Q ss_pred EcCCCCeEEEEECCCCeEEEee
Q psy11781 999 NDVFRYGLIVYDFFKNTSYRLT 1020 (1228)
Q Consensus 999 tD~~~~gLIVydl~~g~swRv~ 1020 (1228)
+=+..+.|.|||+.+++.-+..
T Consensus 278 s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 278 GGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EESTTEEEEEEETTTTEEEEEE
T ss_pred EEcCCCcEEEEEcCCCcEEEEE
Confidence 4444567999999998876654
Done!