RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy11783
         (189 letters)



>d1uoza_ c.6.1.1 (A:) Putative cellulase Rv0062 (Cel6, CelA1)
           {Mycobacterium tuberculosis [TaxId: 1773]}
          Length = 301

 Score = 24.8 bits (54), Expect = 8.2
 Identities = 8/35 (22%), Positives = 15/35 (42%)

Query: 69  LLILRCVDPSDKAMALGLIQFAIGLFGNVPCPIVY 103
           L +  C+ P  +     L+++A+      P   VY
Sbjct: 129 LAMADCLSPDQRQERFDLVRYAVDTLTRDPAAAVY 163


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.139    0.451 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 726,791
Number of extensions: 31634
Number of successful extensions: 67
Number of sequences better than 10.0: 1
Number of HSP's gapped: 67
Number of HSP's successfully gapped: 5
Length of query: 189
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 109
Effective length of database: 1,309,196
Effective search space: 142702364
Effective search space used: 142702364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.5 bits)