Query psy11784
Match_columns 284
No_of_seqs 277 out of 1834
Neff 8.6
Searched_HMMs 46136
Date Fri Aug 16 18:53:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy11784.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/11784hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0160 GabT 4-aminobutyrate a 100.0 2.7E-66 6E-71 475.1 29.3 267 1-268 127-446 (447)
2 COG4992 ArgD Ornithine/acetylo 100.0 3.1E-63 6.8E-68 443.5 25.6 246 1-270 110-401 (404)
3 PRK06938 diaminobutyrate--2-ox 100.0 2.3E-57 5.1E-62 426.6 29.4 266 1-268 137-461 (464)
4 COG0161 BioA Adenosylmethionin 100.0 2E-57 4.3E-62 414.4 26.1 265 1-270 115-446 (449)
5 PRK05965 hypothetical protein; 100.0 1.1E-56 2.4E-61 422.0 30.0 266 1-269 117-449 (459)
6 KOG1404|consensus 100.0 3.1E-57 6.8E-62 397.8 24.3 260 1-261 119-432 (442)
7 PRK06931 diaminobutyrate--2-ox 100.0 2E-56 4.3E-61 420.0 30.0 268 1-270 131-457 (459)
8 PRK07678 aminotransferase; Val 100.0 3.9E-56 8.5E-61 417.6 29.4 267 1-268 115-450 (451)
9 PRK08742 adenosylmethionine--8 100.0 9.8E-56 2.1E-60 415.8 29.9 264 1-268 139-468 (472)
10 PRK05639 4-aminobutyrate amino 100.0 1.4E-55 3E-60 413.9 29.6 268 1-269 123-445 (457)
11 PRK07483 hypothetical protein; 100.0 1.7E-55 3.6E-60 412.3 29.9 268 1-269 100-439 (443)
12 PRK07482 hypothetical protein; 100.0 1.7E-55 3.7E-60 414.2 29.4 266 1-268 121-455 (461)
13 PRK06943 adenosylmethionine--8 100.0 1.9E-55 4.2E-60 412.7 29.5 264 1-268 124-447 (453)
14 PRK07481 hypothetical protein; 100.0 1.7E-55 3.7E-60 413.1 29.1 264 1-268 114-446 (449)
15 PRK06062 hypothetical protein; 100.0 2.4E-55 5.2E-60 412.1 29.1 265 1-269 122-447 (451)
16 PRK07030 adenosylmethionine--8 100.0 4.6E-55 1E-59 411.2 29.4 265 1-269 117-448 (466)
17 PRK06148 hypothetical protein; 100.0 3.9E-55 8.5E-60 443.2 30.4 268 1-268 690-1011(1013)
18 PRK06917 hypothetical protein; 100.0 1.7E-54 3.8E-59 405.9 30.2 273 1-274 101-444 (447)
19 PRK06916 adenosylmethionine--8 100.0 1.5E-54 3.3E-59 407.6 28.8 265 1-269 126-457 (460)
20 TIGR00709 dat 2,4-diaminobutyr 100.0 3.1E-54 6.7E-59 404.2 29.7 267 1-269 112-437 (442)
21 PRK06058 4-aminobutyrate amino 100.0 2.5E-54 5.3E-59 405.2 28.8 264 1-267 127-442 (443)
22 PRK07480 putative aminotransfe 100.0 4.6E-54 1E-58 403.7 29.7 266 1-270 121-451 (456)
23 PRK07036 hypothetical protein; 100.0 7.8E-54 1.7E-58 403.2 30.4 265 1-269 122-454 (466)
24 TIGR03372 putres_am_tran putre 100.0 3E-54 6.6E-59 402.4 27.2 246 1-265 144-442 (442)
25 PRK08593 4-aminobutyrate amino 100.0 9.9E-54 2.1E-58 400.8 29.8 268 1-271 113-433 (445)
26 PRK06082 4-aminobutyrate amino 100.0 1.6E-53 3.5E-58 400.3 29.6 265 1-271 140-455 (459)
27 PRK11522 putrescine--2-oxoglut 100.0 1.1E-53 2.4E-58 400.9 27.9 251 1-270 151-454 (459)
28 PLN02760 4-aminobutyrate:pyruv 100.0 3.8E-53 8.1E-58 401.0 29.2 266 1-270 161-494 (504)
29 PRK06105 aminotransferase; Pro 100.0 6E-53 1.3E-57 396.8 30.2 266 1-270 119-452 (460)
30 PRK06541 hypothetical protein; 100.0 7.2E-53 1.6E-57 396.1 30.2 268 1-269 122-457 (460)
31 PRK13360 omega amino acid--pyr 100.0 6E-53 1.3E-57 395.0 29.3 264 1-268 116-441 (442)
32 PRK09221 beta alanine--pyruvat 100.0 1.7E-52 3.8E-57 392.2 28.9 264 1-268 119-444 (445)
33 PRK12403 putative aminotransfe 100.0 3.1E-52 6.7E-57 392.0 30.3 266 1-270 125-455 (460)
34 PRK06149 hypothetical protein; 100.0 2E-52 4.4E-57 423.1 30.3 265 1-267 651-970 (972)
35 PRK08117 4-aminobutyrate amino 100.0 4.8E-52 1E-56 389.2 30.4 268 1-269 113-431 (433)
36 PRK06173 adenosylmethionine--8 100.0 3.4E-52 7.4E-57 388.3 28.4 259 1-270 114-428 (429)
37 TIGR02407 ectoine_ectB diamino 100.0 2.1E-52 4.5E-57 388.9 26.6 254 1-266 109-411 (412)
38 PRK07495 4-aminobutyrate amino 100.0 5.3E-52 1.2E-56 387.0 28.9 261 1-269 111-423 (425)
39 PRK09264 diaminobutyrate--2-ox 100.0 3.3E-52 7.2E-57 389.0 27.5 259 1-271 113-420 (425)
40 PRK05769 4-aminobutyrate amino 100.0 9E-52 1.9E-56 387.2 29.5 265 1-268 125-440 (441)
41 TIGR00700 GABAtrnsam 4-aminobu 100.0 2.3E-51 4.9E-56 383.1 29.5 264 1-266 104-419 (420)
42 KOG1402|consensus 100.0 3.9E-52 8.5E-57 358.2 22.2 244 1-266 126-426 (427)
43 PRK07986 adenosylmethionine--8 100.0 7.4E-52 1.6E-56 385.7 25.0 256 1-267 113-423 (428)
44 PRK06777 4-aminobutyrate amino 100.0 3.3E-51 7.2E-56 381.7 29.4 258 1-266 111-420 (421)
45 PRK06918 4-aminobutyrate amino 100.0 5.1E-51 1.1E-55 383.7 30.2 270 1-271 125-447 (451)
46 PRK05630 adenosylmethionine--8 100.0 3.2E-51 6.9E-56 381.3 27.0 254 1-267 110-420 (422)
47 PRK08360 4-aminobutyrate amino 100.0 3E-50 6.6E-55 376.9 30.9 267 1-270 111-429 (443)
48 PRK09792 4-aminobutyrate trans 100.0 1.6E-50 3.4E-55 377.2 27.5 258 1-266 111-420 (421)
49 PRK05964 adenosylmethionine--8 100.0 4.1E-49 8.8E-54 368.3 28.1 254 1-268 112-423 (423)
50 PRK08297 L-lysine aminotransfe 100.0 5.4E-49 1.2E-53 368.4 28.3 258 1-268 120-442 (443)
51 TIGR00699 GABAtrns_euk 4-amino 100.0 2.2E-49 4.7E-54 370.6 24.8 255 1-265 132-464 (464)
52 PRK12389 glutamate-1-semialdeh 100.0 3.1E-49 6.7E-54 369.2 25.7 252 1-267 119-427 (428)
53 PRK04612 argD acetylornithine 100.0 2.1E-48 4.5E-53 361.1 27.9 248 1-270 108-406 (408)
54 KOG1403|consensus 100.0 1.4E-49 2.9E-54 339.0 18.2 273 1-273 112-443 (452)
55 PLN02482 glutamate-1-semialdeh 100.0 1.5E-48 3.3E-53 366.8 25.8 253 1-268 165-474 (474)
56 COG0001 HemL Glutamate-1-semia 100.0 9.9E-49 2.1E-53 353.6 23.5 250 1-269 119-430 (432)
57 PLN02974 adenosylmethionine-8- 100.0 2.1E-48 4.6E-53 382.8 27.4 261 1-265 437-816 (817)
58 KOG1401|consensus 100.0 9.3E-49 2E-53 346.6 20.7 247 1-268 126-431 (433)
59 PRK04013 argD acetylornithine/ 100.0 2.6E-48 5.7E-53 354.7 24.3 238 1-269 91-362 (364)
60 TIGR03246 arg_catab_astC succi 100.0 7.6E-48 1.6E-52 357.1 27.3 245 1-268 102-396 (397)
61 PLN00144 acetylornithine trans 100.0 1.1E-47 2.5E-52 353.9 26.1 244 1-268 82-381 (382)
62 PRK03715 argD acetylornithine 100.0 1.3E-47 2.8E-52 354.7 24.9 244 1-268 103-394 (395)
63 TIGR00508 bioA adenosylmethion 100.0 4.3E-47 9.3E-52 354.4 27.7 256 1-267 115-426 (427)
64 TIGR03251 LAT_fam L-lysine 6-t 100.0 3.6E-47 7.9E-52 355.4 26.7 254 1-264 113-431 (431)
65 PRK00615 glutamate-1-semialdeh 100.0 4.8E-47 1E-51 353.7 25.7 250 1-268 120-429 (433)
66 PRK12381 bifunctional succinyl 100.0 8.6E-47 1.9E-51 351.0 27.1 248 1-271 106-403 (406)
67 PRK07046 aminotransferase; Val 100.0 3E-46 6.5E-51 350.4 25.8 246 1-269 140-452 (453)
68 PLN02624 ornithine-delta-amino 100.0 8.2E-45 1.8E-49 343.0 27.8 248 1-268 142-445 (474)
69 PF00202 Aminotran_3: Aminotra 100.0 1.2E-45 2.5E-50 335.4 17.2 203 1-211 86-338 (339)
70 PRK08088 4-aminobutyrate amino 100.0 3E-43 6.5E-48 329.0 28.9 260 1-268 112-424 (425)
71 PRK04073 rocD ornithine--oxo-a 100.0 1.7E-42 3.6E-47 321.4 26.1 239 1-265 107-395 (396)
72 PRK05093 argD bifunctional N-s 100.0 3.7E-42 8E-47 319.7 27.0 246 1-268 107-401 (403)
73 PRK00062 glutamate-1-semialdeh 100.0 1.2E-42 2.6E-47 324.8 23.5 253 1-268 116-425 (426)
74 PRK01278 argD acetylornithine 100.0 4.9E-42 1.1E-46 317.5 26.8 241 1-267 98-388 (389)
75 TIGR01885 Orn_aminotrans ornit 100.0 5.9E-42 1.3E-46 318.1 27.3 245 1-265 104-400 (401)
76 TIGR00713 hemL glutamate-1-sem 100.0 2.5E-42 5.5E-47 322.7 24.0 253 1-268 114-423 (423)
77 PRK03244 argD acetylornithine 100.0 2.8E-41 6.1E-46 313.3 26.8 242 1-268 113-395 (398)
78 PRK02936 argD acetylornithine 100.0 6.2E-41 1.3E-45 308.8 25.9 240 1-265 96-377 (377)
79 KOG1405|consensus 100.0 1.3E-40 2.8E-45 289.3 19.9 261 1-267 150-483 (484)
80 PRK00854 rocD ornithine--oxo-a 100.0 1.8E-39 3.9E-44 301.5 27.2 243 1-266 108-400 (401)
81 PRK04260 acetylornithine amino 100.0 2.5E-39 5.3E-44 298.1 25.8 240 1-264 94-374 (375)
82 PTZ00125 ornithine aminotransf 100.0 6.8E-39 1.5E-43 297.4 27.7 247 1-269 98-397 (400)
83 PRK06209 glutamate-1-semialdeh 100.0 1.1E-38 2.3E-43 298.4 24.1 238 1-270 114-408 (431)
84 PRK02627 acetylornithine amino 100.0 2E-37 4.4E-42 286.9 26.4 242 1-268 106-395 (396)
85 cd00610 OAT_like Acetyl ornith 100.0 5.7E-37 1.2E-41 285.3 26.5 256 1-265 106-413 (413)
86 TIGR00707 argD acetylornithine 100.0 1.1E-30 2.4E-35 240.5 25.2 239 1-264 94-378 (379)
87 PRK07505 hypothetical protein; 99.9 1E-24 2.2E-29 202.7 23.5 231 1-267 115-399 (402)
88 PRK13393 5-aminolevulinate syn 99.9 1.5E-24 3.3E-29 201.8 23.3 229 1-268 115-397 (406)
89 PLN02822 serine palmitoyltrans 99.9 1.5E-23 3.4E-28 198.5 23.4 223 11-269 186-479 (481)
90 TIGR01821 5aminolev_synth 5-am 99.9 2.9E-23 6.3E-28 192.9 23.6 231 1-268 115-397 (402)
91 PRK09064 5-aminolevulinate syn 99.9 3.4E-23 7.3E-28 192.7 23.5 183 77-268 164-398 (407)
92 COG0156 BioF 7-keto-8-aminopel 99.9 2.1E-23 4.6E-28 190.1 20.6 228 16-264 98-387 (388)
93 PLN02955 8-amino-7-oxononanoat 99.9 3E-23 6.5E-28 193.3 18.1 187 61-269 229-463 (476)
94 PLN03227 serine palmitoyltrans 99.9 2.4E-22 5.2E-27 186.1 20.0 174 90-269 138-384 (392)
95 KOG1359|consensus 99.9 3E-20 6.5E-25 159.1 18.2 235 9-267 120-412 (417)
96 PRK13392 5-aminolevulinate syn 99.9 9.5E-20 2.1E-24 169.8 21.8 183 77-268 164-398 (410)
97 PRK07179 hypothetical protein; 99.8 3.9E-19 8.4E-24 165.6 22.1 181 77-268 170-399 (407)
98 TIGR01825 gly_Cac_T_rel pyrido 99.8 9.9E-19 2.1E-23 161.3 23.8 182 77-267 149-381 (385)
99 PRK05958 8-amino-7-oxononanoat 99.8 1.1E-18 2.4E-23 160.7 23.5 182 77-265 155-385 (385)
100 PRK05937 8-amino-7-oxononanoat 99.8 1.8E-17 3.8E-22 152.6 23.4 182 77-269 127-352 (370)
101 TIGR01822 2am3keto_CoA 2-amino 99.8 1E-17 2.3E-22 155.0 21.7 184 77-268 154-390 (393)
102 PRK06939 2-amino-3-ketobutyrat 99.8 3.5E-17 7.6E-22 151.4 25.2 184 77-268 158-394 (397)
103 PLN02483 serine palmitoyltrans 99.8 1.1E-17 2.4E-22 158.9 20.2 170 91-269 241-468 (489)
104 TIGR00858 bioF 8-amino-7-oxono 99.8 2E-16 4.4E-21 144.1 23.6 178 77-262 132-360 (360)
105 cd00613 GDC-P Glycine cleavage 99.7 2.2E-16 4.8E-21 146.3 21.7 228 2-261 92-398 (398)
106 PRK07682 hypothetical protein; 99.7 4.7E-16 1E-20 143.4 19.9 185 77-268 144-377 (378)
107 KOG1360|consensus 99.7 4.8E-16 1E-20 138.3 18.8 238 10-269 225-526 (570)
108 cd00609 AAT_like Aspartate ami 99.7 3.5E-15 7.6E-20 134.9 21.6 170 88-262 130-349 (350)
109 PLN02721 threonine aldolase 99.7 7E-15 1.5E-19 133.9 23.2 185 77-267 120-352 (353)
110 PRK06225 aspartate aminotransf 99.7 4.8E-15 1E-19 136.8 22.0 185 77-270 147-379 (380)
111 PRK03317 histidinol-phosphate 99.7 8.6E-15 1.9E-19 134.5 21.1 176 77-267 149-364 (368)
112 cd06454 KBL_like KBL_like; thi 99.7 2.2E-14 4.9E-19 130.3 22.5 181 77-264 117-348 (349)
113 PRK06108 aspartate aminotransf 99.7 2.5E-14 5.4E-19 131.9 22.4 183 77-266 148-381 (382)
114 PLN00175 aminotransferase fami 99.6 5E-14 1.1E-18 131.5 21.2 183 77-266 177-412 (413)
115 PRK13520 L-tyrosine decarboxyl 99.6 6.9E-14 1.5E-18 128.3 21.7 173 77-266 141-370 (371)
116 PRK07324 transaminase; Validat 99.6 8.6E-14 1.9E-18 128.3 22.3 183 77-267 143-370 (373)
117 PRK07777 aminotransferase; Val 99.6 7.9E-14 1.7E-18 129.0 21.4 183 77-265 149-384 (387)
118 PRK06207 aspartate aminotransf 99.6 1.2E-13 2.6E-18 128.6 22.7 185 77-268 168-403 (405)
119 TIGR02539 SepCysS Sep-tRNA:Cys 99.6 2.5E-13 5.5E-18 125.0 22.7 176 77-267 129-368 (370)
120 PRK02731 histidinol-phosphate 99.6 1.6E-13 3.4E-18 126.0 20.9 181 77-266 144-365 (367)
121 PRK05764 aspartate aminotransf 99.6 4.3E-13 9.3E-18 124.2 23.1 185 77-267 154-391 (393)
122 PF00155 Aminotran_1_2: Aminot 99.6 2E-13 4.2E-18 124.9 20.4 180 77-261 132-363 (363)
123 TIGR03301 PhnW-AepZ 2-aminoeth 99.6 4E-13 8.6E-18 122.3 22.1 179 77-264 113-354 (355)
124 COG0436 Aspartate/tyrosine/aro 99.6 7.6E-14 1.6E-18 129.2 17.5 185 77-268 153-392 (393)
125 PRK07309 aromatic amino acid a 99.6 1.2E-12 2.6E-17 121.4 23.4 187 77-268 153-389 (391)
126 TIGR03402 FeS_nifS cysteine de 99.6 5.3E-13 1.1E-17 123.1 20.8 177 77-269 126-374 (379)
127 PRK06348 aspartate aminotransf 99.6 8.4E-13 1.8E-17 122.1 22.0 181 77-264 152-382 (384)
128 PRK08960 hypothetical protein; 99.5 1.9E-12 4.2E-17 119.8 23.5 181 77-266 155-386 (387)
129 PRK05957 aspartate aminotransf 99.5 2E-12 4.4E-17 119.7 23.7 186 77-268 150-386 (389)
130 KOG1357|consensus 99.5 9.4E-14 2E-18 125.5 13.7 232 16-267 196-502 (519)
131 PRK00950 histidinol-phosphate 99.5 5.5E-13 1.2E-17 122.1 18.9 175 77-265 148-360 (361)
132 cd06451 AGAT_like Alanine-glyo 99.5 1.5E-12 3.2E-17 119.0 21.6 175 77-265 113-355 (356)
133 PRK08361 aspartate aminotransf 99.5 6.9E-13 1.5E-17 122.9 19.7 185 77-267 156-390 (391)
134 PRK07681 aspartate aminotransf 99.5 1.3E-12 2.9E-17 121.3 21.3 179 77-263 156-384 (399)
135 TIGR03537 DapC succinyldiamino 99.5 2.6E-12 5.5E-17 117.4 22.1 179 77-263 126-349 (350)
136 PRK07683 aminotransferase A; V 99.5 3.3E-12 7.2E-17 118.2 22.7 184 77-267 151-383 (387)
137 PRK07568 aspartate aminotransf 99.5 3.9E-12 8.4E-17 118.0 23.2 185 77-269 152-394 (397)
138 TIGR03392 FeS_syn_CsdA cystein 99.5 2.8E-12 6.2E-17 119.0 22.1 176 77-268 147-396 (398)
139 PRK08153 histidinol-phosphate 99.5 9E-13 1.9E-17 121.3 18.2 171 90-269 155-367 (369)
140 TIGR03576 pyridox_MJ0158 pyrid 99.5 3.8E-13 8.3E-18 122.7 15.4 166 90-265 136-345 (346)
141 PRK08912 hypothetical protein; 99.5 3.2E-12 7E-17 118.2 21.8 184 77-266 149-385 (387)
142 TIGR01140 L_thr_O3P_dcar L-thr 99.5 1.4E-12 2.9E-17 118.3 18.5 170 77-261 116-329 (330)
143 PRK12414 putative aminotransfe 99.5 4E-12 8.6E-17 117.6 21.9 181 77-263 152-383 (384)
144 TIGR03540 DapC_direct LL-diami 99.5 3.5E-12 7.6E-17 117.8 21.3 180 77-263 154-382 (383)
145 PRK09331 Sep-tRNA:Cys-tRNA syn 99.5 6E-12 1.3E-16 116.6 22.5 181 77-268 141-382 (387)
146 PRK08175 aminotransferase; Val 99.5 2.2E-12 4.8E-17 119.8 19.5 188 77-267 151-389 (395)
147 PRK09082 methionine aminotrans 99.5 1.5E-12 3.2E-17 120.5 18.3 181 77-263 153-385 (386)
148 PRK08068 transaminase; Reviewe 99.5 5.5E-12 1.2E-16 116.8 22.0 179 77-263 157-385 (389)
149 PRK07366 succinyldiaminopimela 99.5 3.5E-12 7.6E-17 118.0 20.5 172 90-264 165-387 (388)
150 PRK15481 transcriptional regul 99.5 1.8E-12 3.9E-17 121.7 18.7 179 77-266 201-430 (431)
151 PRK03158 histidinol-phosphate 99.5 3.2E-12 6.9E-17 117.1 19.9 177 77-264 141-358 (359)
152 PRK08636 aspartate aminotransf 99.5 1.7E-11 3.7E-16 114.1 25.0 188 78-268 163-401 (403)
153 PRK10874 cysteine sulfinate de 99.5 5.9E-12 1.3E-16 117.0 21.9 176 77-268 150-399 (401)
154 PRK09276 LL-diaminopimelate am 99.5 3.9E-12 8.5E-17 117.6 20.5 180 77-263 156-384 (385)
155 PLN02607 1-aminocyclopropane-1 99.5 1.7E-11 3.6E-16 115.6 25.0 191 77-269 184-439 (447)
156 PRK06290 aspartate aminotransf 99.5 5.1E-12 1.1E-16 117.9 21.3 187 77-269 169-407 (410)
157 cd06502 TA_like Low-specificit 99.5 6.1E-12 1.3E-16 113.9 21.2 177 77-263 110-337 (338)
158 PRK06425 histidinol-phosphate 99.5 1.9E-12 4E-17 117.5 17.4 166 90-265 122-331 (332)
159 PRK07550 hypothetical protein; 99.5 7.3E-12 1.6E-16 115.8 21.4 181 77-264 153-384 (386)
160 PRK05942 aspartate aminotransf 99.5 7.4E-12 1.6E-16 116.2 21.3 179 77-262 160-387 (394)
161 PRK09148 aminotransferase; Val 99.5 2.8E-12 6.2E-17 119.4 18.4 190 78-270 153-393 (405)
162 PRK06107 aspartate aminotransf 99.5 1.8E-11 3.9E-16 113.9 22.3 186 77-268 156-401 (402)
163 TIGR01814 kynureninase kynuren 99.5 7.2E-12 1.6E-16 116.7 19.6 173 77-265 158-405 (406)
164 TIGR01141 hisC histidinol-phos 99.5 2.1E-12 4.5E-17 117.5 15.7 169 77-261 132-345 (346)
165 cd06453 SufS_like Cysteine des 99.5 1.6E-11 3.5E-16 112.8 21.3 169 77-261 129-373 (373)
166 TIGR01264 tyr_amTase_E tyrosin 99.4 3E-11 6.4E-16 112.4 22.8 183 77-267 158-399 (401)
167 PTZ00433 tyrosine aminotransfe 99.4 3.6E-11 7.9E-16 112.3 23.4 187 77-269 167-410 (412)
168 PRK09147 succinyldiaminopimela 99.4 1.9E-11 4.2E-16 113.4 21.4 181 77-266 156-395 (396)
169 PRK05664 threonine-phosphate d 99.4 3.8E-11 8.2E-16 108.9 22.6 163 92-267 127-328 (330)
170 COG1167 ARO8 Transcriptional r 99.4 1.4E-11 2.9E-16 116.6 20.2 188 77-269 215-457 (459)
171 PRK06836 aspartate aminotransf 99.4 3.4E-11 7.4E-16 111.8 22.5 182 77-268 158-392 (394)
172 TIGR02326 transamin_PhnW 2-ami 99.4 3.7E-11 8.1E-16 110.1 22.5 176 77-265 117-360 (363)
173 PLN02376 1-aminocyclopropane-1 99.4 8.7E-11 1.9E-15 112.1 25.7 190 77-268 183-439 (496)
174 PRK08363 alanine aminotransfer 99.4 3.5E-11 7.5E-16 111.8 22.5 184 77-267 156-394 (398)
175 PRK08056 threonine-phosphate d 99.4 1.2E-11 2.5E-16 113.3 18.6 169 89-265 141-353 (356)
176 PRK07337 aminotransferase; Val 99.4 3.9E-11 8.4E-16 111.1 22.1 180 77-265 153-387 (388)
177 PTZ00376 aspartate aminotransf 99.4 3.1E-11 6.6E-16 112.5 21.3 177 77-267 163-403 (404)
178 PRK06855 aminotransferase; Val 99.4 6.8E-11 1.5E-15 111.1 23.7 187 77-268 159-430 (433)
179 COG0520 csdA Selenocysteine ly 99.4 4.1E-11 8.8E-16 111.2 21.8 175 77-266 152-404 (405)
180 PRK06959 putative threonine-ph 99.4 1.6E-11 3.6E-16 111.7 18.6 165 92-269 133-335 (339)
181 cd06450 DOPA_deC_like DOPA dec 99.4 1.4E-11 3.1E-16 111.9 18.2 182 77-263 132-344 (345)
182 PLN00145 tyrosine/nicotianamin 99.4 8E-11 1.7E-15 110.6 23.7 188 77-270 180-427 (430)
183 PRK13034 serine hydroxymethylt 99.4 4.8E-11 1E-15 111.6 22.1 178 77-268 157-393 (416)
184 PRK03321 putative aminotransfe 99.4 4.1E-12 8.8E-17 116.0 14.5 175 77-266 135-350 (352)
185 PLN00143 tyrosine/nicotianamin 99.4 7.9E-11 1.7E-15 109.9 23.3 186 77-268 160-405 (409)
186 PF00266 Aminotran_5: Aminotra 99.4 3.9E-11 8.5E-16 110.4 20.9 220 2-257 72-371 (371)
187 TIGR03538 DapC_gpp succinyldia 99.4 4.3E-11 9.2E-16 111.0 21.1 179 77-264 155-392 (393)
188 PRK09295 bifunctional cysteine 99.4 5.9E-11 1.3E-15 110.6 21.9 174 77-266 154-403 (406)
189 PRK14809 histidinol-phosphate 99.4 8.9E-12 1.9E-16 114.1 16.1 168 90-266 154-356 (357)
190 PLN02450 1-aminocyclopropane-1 99.4 4.2E-11 9E-16 113.6 20.9 191 77-269 175-432 (468)
191 PLN02656 tyrosine transaminase 99.4 1.7E-10 3.7E-15 107.6 24.4 187 77-269 159-405 (409)
192 PRK13355 bifunctional HTH-doma 99.4 4.9E-11 1.1E-15 114.6 21.2 183 77-268 271-515 (517)
193 PRK09265 aminotransferase AlaT 99.4 1E-10 2.3E-15 108.8 22.6 184 77-268 158-402 (404)
194 PRK06358 threonine-phosphate d 99.4 3.8E-11 8.2E-16 109.9 19.1 167 90-265 141-353 (354)
195 PRK02610 histidinol-phosphate 99.4 7E-11 1.5E-15 109.0 21.0 178 77-268 154-372 (374)
196 TIGR01979 sufS cysteine desulf 99.4 9.5E-11 2.1E-15 108.9 22.0 176 77-268 149-402 (403)
197 PLN02231 alanine transaminase 99.4 1E-10 2.3E-15 112.4 22.7 192 77-272 255-532 (534)
198 PRK07865 N-succinyldiaminopime 99.4 2.1E-11 4.5E-16 111.9 17.3 168 89-262 147-363 (364)
199 PLN03026 histidinol-phosphate 99.4 8.3E-11 1.8E-15 108.7 20.8 173 77-263 164-378 (380)
200 TIGR03539 DapC_actino succinyl 99.4 2.3E-11 5.1E-16 111.4 16.8 166 89-261 141-356 (357)
201 PLN02187 rooty/superroot1 99.4 1.7E-10 3.6E-15 109.4 22.9 189 77-271 194-442 (462)
202 PTZ00377 alanine aminotransfer 99.4 2E-10 4.3E-15 109.4 23.5 191 77-271 202-479 (481)
203 TIGR03812 tyr_de_CO2_Arch tyro 99.4 1.5E-10 3.2E-15 106.4 21.9 176 77-263 143-372 (373)
204 PRK02948 cysteine desulfurase; 99.4 5.4E-11 1.2E-15 109.8 18.6 178 77-269 128-376 (381)
205 PRK13479 2-aminoethylphosphona 99.4 3.4E-10 7.3E-15 104.0 23.7 180 77-268 119-364 (368)
206 PRK09440 avtA valine--pyruvate 99.4 4.6E-11 1E-15 111.6 18.1 176 89-269 178-413 (416)
207 PLN02855 Bifunctional selenocy 99.4 1.6E-10 3.6E-15 108.2 21.9 177 77-269 163-420 (424)
208 PRK14807 histidinol-phosphate 99.4 1.8E-10 4E-15 105.2 21.6 172 77-265 137-350 (351)
209 TIGR01265 tyr_nico_aTase tyros 99.4 2.9E-10 6.3E-15 105.9 22.8 185 77-267 159-401 (403)
210 PRK04781 histidinol-phosphate 99.3 2.5E-10 5.4E-15 104.9 21.6 165 89-265 151-361 (364)
211 KOG0259|consensus 99.3 7E-11 1.5E-15 105.1 16.9 188 75-269 187-435 (447)
212 TIGR02006 IscS cysteine desulf 99.3 1.5E-10 3.2E-15 107.8 20.2 175 77-269 132-379 (402)
213 PRK07590 L,L-diaminopimelate a 99.3 5.5E-11 1.2E-15 110.9 17.0 170 90-264 176-408 (409)
214 PRK13580 serine hydroxymethylt 99.3 1.7E-10 3.7E-15 108.4 20.1 180 77-268 209-446 (493)
215 TIGR01976 am_tr_V_VC1184 cyste 99.3 1E-10 2.2E-15 108.5 17.9 168 77-261 146-397 (397)
216 TIGR03403 nifS_epsilon cystein 99.3 3.3E-10 7.2E-15 104.6 21.2 178 77-270 130-378 (382)
217 PRK00011 glyA serine hydroxyme 99.3 8.3E-10 1.8E-14 103.1 24.0 177 77-267 154-389 (416)
218 cd06452 SepCysS Sep-tRNA:Cys-t 99.3 5.4E-10 1.2E-14 102.4 22.3 178 77-265 122-360 (361)
219 PRK01533 histidinol-phosphate 99.3 3.1E-11 6.8E-16 111.0 14.0 179 77-270 141-358 (366)
220 TIGR03542 DAPAT_plant LL-diami 99.3 7.9E-11 1.7E-15 109.6 16.7 171 90-264 173-401 (402)
221 cd00614 CGS_like CGS_like: Cys 99.3 1.2E-10 2.6E-15 107.3 17.7 171 77-265 115-368 (369)
222 cd00616 AHBA_syn 3-amino-5-hyd 99.3 2.3E-10 5E-15 104.1 19.4 169 77-262 96-352 (352)
223 COG0079 HisC Histidinol-phosph 99.3 1.1E-10 2.4E-15 106.6 17.2 175 77-267 135-354 (356)
224 cd00378 SHMT Serine-glycine hy 99.3 5.6E-10 1.2E-14 103.7 22.2 177 77-267 150-385 (402)
225 KOG1368|consensus 99.3 2.9E-10 6.2E-15 98.4 18.4 242 4-268 59-370 (384)
226 PLN02409 serine--glyoxylate am 99.3 8.6E-10 1.9E-14 102.7 23.2 181 77-269 123-374 (401)
227 COG1168 MalY Bifunctional PLP- 99.3 2.8E-10 6E-15 101.7 18.5 185 77-268 147-387 (388)
228 PRK05839 hypothetical protein; 99.3 1E-10 2.2E-15 107.9 15.3 169 90-266 155-373 (374)
229 PRK09105 putative aminotransfe 99.3 5.2E-10 1.1E-14 103.1 19.9 161 93-265 169-368 (370)
230 PRK10534 L-threonine aldolase; 99.3 2.3E-10 4.9E-15 103.7 17.0 175 77-266 113-332 (333)
231 PRK01688 histidinol-phosphate 99.3 1.4E-10 3E-15 106.1 15.7 169 77-261 136-350 (351)
232 TIGR01977 am_tr_V_EF2568 cyste 99.3 6.9E-10 1.5E-14 102.0 19.9 172 77-263 127-375 (376)
233 PLN02397 aspartate transaminas 99.2 1.4E-09 3.1E-14 101.9 21.1 176 77-266 181-420 (423)
234 TIGR01325 O_suc_HS_sulf O-succ 99.2 4E-10 8.7E-15 104.2 17.1 134 77-225 129-319 (380)
235 PRK05166 histidinol-phosphate 99.2 1E-09 2.2E-14 101.1 19.5 178 77-265 149-369 (371)
236 PRK05387 histidinol-phosphate 99.2 3.8E-10 8.2E-15 103.0 16.4 160 93-266 148-352 (353)
237 PRK07392 threonine-phosphate d 99.2 2.3E-09 5E-14 98.3 21.4 161 92-265 151-357 (360)
238 PRK09257 aromatic amino acid a 99.2 2.1E-09 4.6E-14 99.8 21.3 174 77-264 159-395 (396)
239 PRK08354 putative aminotransfe 99.2 1.1E-09 2.3E-14 98.5 18.6 172 77-264 108-309 (311)
240 KOG0256|consensus 99.2 1.6E-09 3.6E-14 97.3 19.3 187 77-267 210-461 (471)
241 PRK07908 hypothetical protein; 99.2 7.3E-10 1.6E-14 101.1 17.6 162 90-266 139-346 (349)
242 PRK04870 histidinol-phosphate 99.2 1.2E-09 2.6E-14 99.9 18.6 172 77-264 142-355 (356)
243 PTZ00094 serine hydroxymethylt 99.2 3.9E-09 8.5E-14 99.8 22.4 178 77-267 171-408 (452)
244 PLN02672 methionine S-methyltr 99.2 2.9E-09 6.2E-14 108.2 21.6 186 77-266 817-1079(1082)
245 PRK14012 cysteine desulfurase; 99.2 1.8E-09 3.9E-14 100.6 18.6 175 77-269 134-381 (404)
246 PRK04366 glycine dehydrogenase 99.1 9E-09 2E-13 98.0 21.8 183 77-271 198-452 (481)
247 TIGR01437 selA_rel uncharacter 99.1 3E-09 6.4E-14 97.8 17.9 171 77-264 138-362 (363)
248 PLN02651 cysteine desulfurase 99.1 1.9E-09 4.2E-14 98.9 16.5 161 77-255 128-364 (364)
249 PRK13238 tnaA tryptophanase/L- 99.1 5.5E-09 1.2E-13 98.8 19.7 192 77-269 163-435 (460)
250 COG2008 GLY1 Threonine aldolas 99.1 7.4E-09 1.6E-13 92.2 19.1 237 6-265 39-341 (342)
251 PRK08637 hypothetical protein; 99.1 7E-09 1.5E-13 96.1 19.2 186 77-268 132-387 (388)
252 PRK14808 histidinol-phosphate 99.1 2.4E-09 5.1E-14 97.4 15.8 157 92-263 140-333 (335)
253 PLN03226 serine hydroxymethylt 99.1 9.8E-09 2.1E-13 97.4 20.3 177 77-267 172-419 (475)
254 PRK09275 aspartate aminotransf 99.1 2.6E-09 5.7E-14 102.0 15.4 90 77-176 231-328 (527)
255 PLN02242 methionine gamma-lyas 99.1 1.6E-08 3.4E-13 94.7 19.8 172 77-268 152-416 (418)
256 PRK06084 O-acetylhomoserine am 99.1 2.1E-08 4.5E-13 94.0 20.1 83 77-173 133-218 (425)
257 PRK08249 cystathionine gamma-s 99.1 1.3E-08 2.9E-13 94.6 18.4 176 77-270 139-396 (398)
258 TIGR01326 OAH_OAS_sulfhy OAH/O 99.1 7.9E-09 1.7E-13 96.7 16.9 85 77-175 132-219 (418)
259 PRK04635 histidinol-phosphate 99.1 3.1E-09 6.8E-14 97.2 13.8 161 90-263 147-351 (354)
260 TIGR01324 cysta_beta_ly_B cyst 99.1 1.4E-08 3E-13 93.8 17.9 172 78-267 126-376 (377)
261 PRK00451 glycine dehydrogenase 99.0 2.5E-08 5.4E-13 94.1 19.8 170 77-265 194-446 (447)
262 TIGR01328 met_gam_lyase methio 99.0 2.2E-08 4.8E-13 92.9 19.0 173 77-267 134-390 (391)
263 TIGR03801 asp_4_decarbox aspar 99.0 4.6E-09 1E-13 100.2 14.7 90 77-176 230-327 (521)
264 PRK05367 glycine dehydrogenase 99.0 3.8E-08 8.3E-13 100.0 22.0 238 2-270 569-878 (954)
265 COG1104 NifS Cysteine sulfinat 99.0 3.2E-08 6.9E-13 89.9 19.0 180 77-271 131-381 (386)
266 PRK06767 methionine gamma-lyas 99.0 9E-09 2E-13 95.4 16.0 173 77-267 136-385 (386)
267 PRK05994 O-acetylhomoserine am 99.0 2.5E-08 5.4E-13 93.6 19.0 83 77-173 138-223 (427)
268 TIGR00461 gcvP glycine dehydro 99.0 9.6E-08 2.1E-12 96.0 23.9 233 6-270 561-870 (939)
269 PRK03967 histidinol-phosphate 99.0 8.8E-09 1.9E-13 93.7 15.2 152 94-266 145-333 (337)
270 PLN02414 glycine dehydrogenase 99.0 1.2E-07 2.6E-12 96.2 24.2 222 18-270 616-910 (993)
271 KOG0257|consensus 99.0 1.1E-09 2.5E-14 98.8 8.6 156 77-236 162-381 (420)
272 PRK06460 hypothetical protein; 99.0 1.4E-08 3.1E-13 93.7 15.8 165 89-268 129-375 (376)
273 PRK07811 cystathionine gamma-s 99.0 8.6E-08 1.9E-12 88.9 20.2 172 77-266 136-387 (388)
274 PRK08133 O-succinylhomoserine 99.0 3.7E-08 7.9E-13 91.5 17.5 172 77-266 136-389 (390)
275 PRK12566 glycine dehydrogenase 99.0 1.2E-07 2.6E-12 94.9 22.0 184 77-270 628-879 (954)
276 PRK08861 cystathionine gamma-s 99.0 6.8E-08 1.5E-12 89.5 19.1 175 77-270 128-386 (388)
277 PRK07504 O-succinylhomoserine 99.0 4.8E-08 1E-12 90.9 18.1 174 77-268 140-396 (398)
278 cd01494 AAT_I Aspartate aminot 99.0 8.7E-09 1.9E-13 83.1 11.6 79 88-174 90-170 (170)
279 PRK09028 cystathionine beta-ly 98.9 1.2E-07 2.7E-12 87.8 19.9 173 78-268 137-388 (394)
280 PRK08045 cystathionine gamma-s 98.9 1.1E-07 2.4E-12 88.1 19.0 175 77-269 127-384 (386)
281 PRK07050 cystathionine beta-ly 98.9 1.8E-07 3.8E-12 87.0 19.4 172 78-267 141-391 (394)
282 TIGR02080 O_succ_thio_ly O-suc 98.9 1.4E-07 2.9E-12 87.4 18.5 92 77-182 126-222 (382)
283 PRK07503 methionine gamma-lyas 98.9 1.7E-07 3.7E-12 87.4 19.0 92 77-182 140-235 (403)
284 PRK06234 methionine gamma-lyas 98.9 1.1E-07 2.3E-12 88.6 17.5 174 77-268 139-398 (400)
285 PRK08247 cystathionine gamma-s 98.9 2E-07 4.4E-12 85.8 18.8 171 77-267 126-364 (366)
286 PRK08114 cystathionine beta-ly 98.9 1.8E-07 3.8E-12 86.7 18.4 174 77-268 137-394 (395)
287 PRK05968 hypothetical protein; 98.9 2E-07 4.4E-12 86.5 18.8 171 77-267 138-386 (389)
288 PLN02880 tyrosine decarboxylas 98.9 5.1E-07 1.1E-11 86.1 21.9 189 77-270 223-487 (490)
289 COG3977 Alanine-alpha-ketoisov 98.9 1.3E-07 2.9E-12 82.2 16.0 176 89-269 178-413 (417)
290 cd00617 Tnase_like Tryptophana 98.9 6.9E-08 1.5E-12 90.5 15.5 192 77-270 138-411 (431)
291 PRK08776 cystathionine gamma-s 98.9 2.7E-07 5.7E-12 86.1 18.8 91 77-181 135-230 (405)
292 TIGR01329 cysta_beta_ly_E cyst 98.9 2.1E-07 4.6E-12 86.0 17.9 172 77-267 121-375 (378)
293 PRK07810 O-succinylhomoserine 98.9 2.2E-07 4.7E-12 86.6 18.1 89 77-179 145-237 (403)
294 PRK08064 cystathionine beta-ly 98.9 4.4E-07 9.5E-12 84.3 19.9 93 77-183 128-225 (390)
295 TIGR03531 selenium_SpcS O-phos 98.8 4.1E-07 9E-12 85.3 19.5 183 77-265 191-444 (444)
296 PRK07049 methionine gamma-lyas 98.8 1.5E-07 3.4E-12 88.3 16.5 174 78-266 160-425 (427)
297 PRK05967 cystathionine beta-ly 98.8 4.2E-07 9.1E-12 84.3 19.1 173 78-268 140-392 (395)
298 PRK07582 cystathionine gamma-l 98.8 2E-07 4.4E-12 85.8 16.5 158 89-262 131-364 (366)
299 KOG0634|consensus 98.8 6.9E-07 1.5E-11 81.2 19.2 189 77-268 184-467 (472)
300 PRK08574 cystathionine gamma-s 98.8 3.1E-07 6.8E-12 85.1 17.7 92 77-182 126-223 (385)
301 PRK06176 cystathionine gamma-s 98.8 3.1E-07 6.8E-12 85.0 17.5 91 77-181 124-219 (380)
302 PLN02590 probable tyrosine dec 98.8 2.7E-06 5.9E-11 81.7 24.0 189 77-270 271-535 (539)
303 PRK07812 O-acetylhomoserine am 98.8 7.3E-07 1.6E-11 83.8 19.4 74 77-164 145-220 (436)
304 TIGR03235 DNA_S_dndA cysteine 98.8 9.3E-08 2E-12 87.3 13.1 87 77-177 128-216 (353)
305 PRK08248 O-acetylhomoserine am 98.8 5.5E-07 1.2E-11 84.6 18.5 83 77-173 139-224 (431)
306 COG1103 Archaea-specific pyrid 98.8 1.6E-06 3.5E-11 74.6 19.2 181 75-267 141-380 (382)
307 PF01053 Cys_Met_Meta_PP: Cys/ 98.8 7.1E-07 1.5E-11 82.5 17.9 172 77-266 130-386 (386)
308 PRK05939 hypothetical protein; 98.7 8.2E-07 1.8E-11 82.6 17.8 83 77-173 121-206 (397)
309 PRK02769 histidine decarboxyla 98.7 6.1E-06 1.3E-10 76.3 22.7 171 77-267 147-372 (380)
310 TIGR03588 PseC UDP-4-keto-6-de 98.7 4E-06 8.6E-11 77.5 21.2 176 77-265 107-380 (380)
311 PRK08134 O-acetylhomoserine am 98.7 2.1E-06 4.5E-11 80.8 19.1 81 77-171 139-222 (433)
312 TIGR03799 NOD_PanD_pyr putativ 98.7 8.7E-06 1.9E-10 78.2 23.1 94 77-175 249-348 (522)
313 TIGR02379 ECA_wecE TDP-4-keto- 98.7 6.1E-06 1.3E-10 76.3 21.4 90 77-181 109-203 (376)
314 PLN02509 cystathionine beta-ly 98.6 7.9E-07 1.7E-11 84.1 15.0 171 77-266 207-460 (464)
315 KOG0633|consensus 98.6 4.5E-06 9.8E-11 71.5 17.7 178 77-264 148-374 (375)
316 KOG1358|consensus 98.6 5.9E-07 1.3E-11 80.7 13.0 170 91-268 234-466 (467)
317 TIGR01788 Glu-decarb-GAD gluta 98.6 4.3E-06 9.2E-11 78.5 19.5 183 77-268 176-430 (431)
318 PRK05613 O-acetylhomoserine am 98.6 2E-06 4.3E-11 80.9 17.3 83 77-173 145-230 (437)
319 PRK07269 cystathionine gamma-s 98.6 1.2E-06 2.6E-11 80.6 15.4 171 77-266 126-363 (364)
320 PLN03032 serine decarboxylase; 98.6 1E-05 2.3E-10 74.5 21.4 168 77-263 148-372 (374)
321 PRK04311 selenocysteine syntha 98.6 3.5E-06 7.6E-11 79.7 18.6 178 77-266 206-463 (464)
322 PRK03080 phosphoserine aminotr 98.6 1.7E-06 3.7E-11 80.0 16.1 161 94-269 140-375 (378)
323 PRK11658 UDP-4-amino-4-deoxy-L 98.6 4.5E-06 9.7E-11 77.2 18.1 87 77-179 111-201 (379)
324 COG0075 Serine-pyruvate aminot 98.6 7.8E-06 1.7E-10 74.8 19.0 177 77-268 119-364 (383)
325 COG2873 MET17 O-acetylhomoseri 98.6 1.3E-06 2.8E-11 78.3 13.2 84 77-174 137-223 (426)
326 PRK07671 cystathionine beta-ly 98.5 2.5E-06 5.5E-11 78.8 15.2 134 77-225 124-315 (377)
327 PRK15407 lipopolysaccharide bi 98.5 1.3E-05 2.8E-10 75.6 19.9 81 77-175 149-235 (438)
328 TIGR00474 selA seryl-tRNA(sec) 98.5 8E-06 1.7E-10 77.1 17.9 94 77-181 201-308 (454)
329 COG3844 Kynureninase [Amino ac 98.5 1.4E-05 2.9E-10 70.7 16.9 175 79-269 158-404 (407)
330 PLN02263 serine decarboxylase 98.5 3.4E-05 7.3E-10 72.7 20.4 226 1-268 162-444 (470)
331 TIGR02617 tnaA_trp_ase tryptop 98.5 1.8E-05 3.9E-10 73.5 17.9 191 77-270 169-444 (467)
332 PRK11706 TDP-4-oxo-6-deoxy-D-g 98.5 3.8E-05 8.2E-10 70.9 20.4 86 77-179 109-200 (375)
333 KOG1549|consensus 98.4 9.2E-06 2E-10 74.6 15.5 85 77-175 171-257 (428)
334 TIGR02618 tyr_phenol_ly tyrosi 98.4 1.9E-05 4.2E-10 73.7 17.8 189 77-270 156-429 (450)
335 TIGR01366 serC_3 phosphoserine 98.4 1.1E-05 2.4E-10 74.1 15.3 162 89-267 127-360 (361)
336 PF12897 Aminotran_MocR: Alani 98.3 8.1E-05 1.8E-09 67.5 18.7 187 77-268 160-416 (425)
337 PRK13237 tyrosine phenol-lyase 98.3 8.8E-05 1.9E-09 69.5 18.6 190 77-270 163-436 (460)
338 PRK06702 O-acetylhomoserine am 98.3 2.8E-05 6.1E-10 73.0 15.5 74 77-164 137-212 (432)
339 cd00615 Orn_deC_like Ornithine 98.3 4.4E-06 9.6E-11 74.5 9.2 78 77-163 142-223 (294)
340 COG0626 MetC Cystathionine bet 98.2 0.00017 3.7E-09 66.6 18.3 164 89-268 148-395 (396)
341 KOG2862|consensus 98.2 0.00017 3.7E-09 63.4 17.1 180 77-267 131-382 (385)
342 PLN02368 alanine transaminase 98.2 3.3E-05 7.2E-10 72.1 13.6 104 77-182 194-318 (407)
343 KOG0053|consensus 98.2 0.00013 2.8E-09 67.0 16.7 93 77-183 152-249 (409)
344 KOG0258|consensus 98.2 6.8E-05 1.5E-09 67.7 14.4 186 77-269 200-471 (475)
345 TIGR01364 serC_1 phosphoserine 98.1 0.00015 3.3E-09 66.3 15.9 140 118-266 149-347 (349)
346 KOG3846|consensus 98.1 0.00015 3.3E-09 63.7 14.7 178 77-269 201-463 (465)
347 PRK05355 3-phosphoserine/phosp 98.1 0.00017 3.6E-09 66.4 15.7 133 123-266 165-357 (360)
348 PLN02271 serine hydroxymethylt 98.1 0.0007 1.5E-08 64.9 19.8 178 77-266 287-539 (586)
349 COG1003 GcvP Glycine cleavage 98.1 0.00095 2.1E-08 61.3 19.5 232 7-271 141-451 (496)
350 PF00464 SHMT: Serine hydroxym 98.0 0.00045 9.8E-09 64.0 16.8 170 77-259 158-397 (399)
351 COG3033 TnaA Tryptophanase [Am 98.0 0.00054 1.2E-08 61.5 16.2 56 77-132 171-227 (471)
352 PRK05367 glycine dehydrogenase 97.9 0.00051 1.1E-08 70.4 16.9 158 90-262 206-437 (954)
353 PLN02414 glycine dehydrogenase 97.9 0.0012 2.7E-08 67.6 19.6 158 90-263 234-465 (993)
354 PLN02724 Molybdenum cofactor s 97.9 0.00089 1.9E-08 67.9 18.3 168 90-267 192-488 (805)
355 PF01041 DegT_DnrJ_EryC1: DegT 97.9 0.0026 5.5E-08 58.5 19.6 170 77-262 103-363 (363)
356 PF01212 Beta_elim_lyase: Beta 97.8 9.2E-05 2E-09 66.0 8.3 96 77-179 108-213 (290)
357 cd00611 PSAT_like Phosphoserin 97.8 0.00081 1.8E-08 61.6 14.8 160 89-264 137-353 (355)
358 COG1448 TyrB Aspartate/tyrosin 97.8 0.0014 3.1E-08 59.4 15.4 169 78-264 160-395 (396)
359 PRK06434 cystathionine gamma-l 97.8 0.00099 2.1E-08 61.8 14.7 122 90-225 148-321 (384)
360 COG0112 GlyA Glycine/serine hy 97.7 0.0062 1.3E-07 55.5 19.0 178 77-267 155-390 (413)
361 COG0399 WecE Predicted pyridox 97.7 0.0065 1.4E-07 55.9 18.8 90 77-182 112-206 (374)
362 PF05889 SLA_LP_auto_ag: Solub 97.6 0.0082 1.8E-07 55.0 17.8 183 77-266 141-389 (389)
363 PF02347 GDC-P: Glycine cleava 97.5 0.0072 1.6E-07 56.4 17.1 157 88-261 195-429 (429)
364 PRK15029 arginine decarboxylas 97.5 0.005 1.1E-07 61.6 16.9 46 219-266 558-603 (755)
365 TIGR00461 gcvP glycine dehydro 97.4 0.032 6.9E-07 57.0 20.7 156 90-262 194-426 (939)
366 COG0403 GcvP Glycine cleavage 97.3 0.071 1.5E-06 49.3 19.9 170 77-264 200-447 (450)
367 KOG2040|consensus 97.3 0.039 8.4E-07 53.4 18.3 231 7-269 614-920 (1001)
368 PF00282 Pyridoxal_deC: Pyrido 97.1 0.013 2.7E-07 54.3 13.8 95 77-176 178-278 (373)
369 COG0076 GadB Glutamate decarbo 97.1 0.009 2E-07 56.7 13.0 93 77-176 195-292 (460)
370 PF01276 OKR_DC_1: Orn/Lys/Arg 97.1 0.018 3.9E-07 53.7 14.6 88 78-174 154-254 (417)
371 PF03841 SelA: L-seryl-tRNA se 96.8 0.0029 6.3E-08 57.5 6.5 97 77-183 126-235 (367)
372 PRK15399 lysine decarboxylase 96.8 0.12 2.7E-06 51.4 17.6 48 217-266 511-558 (713)
373 PRK13578 ornithine decarboxyla 96.8 0.079 1.7E-06 52.8 16.3 49 217-267 517-565 (720)
374 KOG0629|consensus 96.7 0.019 4.1E-07 52.8 11.0 177 77-264 237-506 (510)
375 PRK15400 lysine decarboxylase 96.5 0.056 1.2E-06 53.8 13.6 48 217-266 511-558 (714)
376 PLN02452 phosphoserine transam 96.1 0.23 5.1E-06 45.7 14.6 135 125-266 171-362 (365)
377 TIGR01365 serC_2 phosphoserine 95.7 0.32 6.9E-06 45.0 13.5 51 217-267 321-373 (374)
378 PRK12462 phosphoserine aminotr 95.7 0.78 1.7E-05 42.3 15.8 139 119-266 163-361 (364)
379 PF04864 Alliinase_C: Allinase 95.6 0.066 1.4E-06 48.3 8.0 44 218-263 315-361 (363)
380 PRK12566 glycine dehydrogenase 95.5 2.4 5.2E-05 43.7 19.9 155 89-262 207-439 (954)
381 COG1921 SelA Selenocysteine sy 94.9 0.16 3.5E-06 46.8 8.8 98 77-183 146-245 (395)
382 KOG0628|consensus 94.8 0.81 1.7E-05 42.9 12.9 63 207-269 408-473 (511)
383 KOG1412|consensus 93.8 4.8 0.0001 36.1 16.2 154 100-269 188-407 (410)
384 TIGR03811 tyr_de_CO2_Ent tyros 92.2 3.2 7E-05 40.9 13.0 57 77-137 262-326 (608)
385 PF06838 Met_gamma_lyase: Meth 91.7 11 0.00023 34.8 16.1 97 77-182 144-246 (403)
386 COG1932 SerC Phosphoserine ami 91.7 6.1 0.00013 36.1 13.2 112 153-267 191-363 (365)
387 COG1982 LdcC Arginine/lysine/o 91.6 14 0.0003 35.9 18.4 80 77-164 153-236 (557)
388 KOG2467|consensus 90.6 3.8 8.3E-05 37.5 10.7 148 113-266 206-425 (477)
389 KOG1383|consensus 89.7 19 0.0004 34.1 14.7 87 184-271 356-450 (491)
390 KOG1411|consensus 80.4 18 0.00039 33.1 9.5 46 94-141 201-247 (427)
391 PF13481 AAA_25: AAA domain; P 74.1 8.7 0.00019 31.4 5.6 52 77-129 129-184 (193)
392 COG0352 ThiE Thiamine monophos 65.3 15 0.00033 31.1 5.2 48 77-131 24-72 (211)
393 PF12310 Elf-1_N: Transcriptio 62.5 5.6 0.00012 29.8 1.8 32 89-136 29-60 (108)
394 cd01821 Rhamnogalacturan_acety 61.7 29 0.00062 28.4 6.3 55 74-128 90-150 (198)
395 COG2159 Predicted metal-depend 60.8 33 0.00072 30.5 6.9 54 77-138 115-168 (293)
396 COG1105 FruK Fructose-1-phosph 59.7 1E+02 0.0022 27.8 9.7 23 108-130 143-165 (310)
397 smart00642 Aamy Alpha-amylase 59.1 44 0.00096 27.0 6.8 48 89-136 31-95 (166)
398 cd00984 DnaB_C DnaB helicase C 58.8 28 0.00062 29.5 6.0 40 90-129 123-168 (242)
399 cd01123 Rad51_DMC1_radA Rad51_ 58.1 31 0.00066 29.1 6.0 54 76-130 102-166 (235)
400 cd07571 ALP_N-acyl_transferase 57.9 38 0.00082 29.5 6.7 53 77-129 25-77 (270)
401 TIGR03712 acc_sec_asp2 accesso 55.0 2E+02 0.0043 27.8 11.0 167 91-266 316-505 (511)
402 COG4100 Cystathionine beta-lya 52.9 1.1E+02 0.0024 27.6 8.5 147 78-234 156-314 (416)
403 PRK05409 hypothetical protein; 51.8 19 0.00042 31.9 3.8 33 100-132 65-97 (281)
404 COG0296 GlgB 1,4-alpha-glucan 48.2 22 0.00049 35.2 3.9 33 109-141 212-244 (628)
405 cd04915 ACT_AK-Ectoine_2 ACT d 48.1 49 0.0011 22.0 4.6 49 215-265 16-64 (66)
406 PF08543 Phos_pyr_kin: Phospho 47.0 30 0.00064 29.8 4.2 28 107-134 69-96 (246)
407 COG0648 Nfo Endonuclease IV [D 46.8 62 0.0014 28.7 6.1 62 70-134 117-179 (280)
408 PF02082 Rrf2: Transcriptional 46.2 52 0.0011 23.0 4.7 43 215-257 40-82 (83)
409 COG0062 Uncharacterized conser 46.0 67 0.0015 27.1 5.9 65 91-160 119-185 (203)
410 PF03796 DnaB_C: DnaB-like hel 45.8 49 0.0011 28.6 5.4 53 77-129 114-175 (259)
411 PF04909 Amidohydro_2: Amidohy 45.7 71 0.0015 27.1 6.4 50 77-130 87-136 (273)
412 KOG3843|consensus 45.6 50 0.0011 29.1 5.2 54 76-133 142-196 (432)
413 TIGR03849 arch_ComA phosphosul 44.7 33 0.00072 29.6 4.0 47 77-128 11-58 (237)
414 cd01393 recA_like RecA is a b 44.0 82 0.0018 26.3 6.4 41 89-129 113-164 (226)
415 TIGR02236 recomb_radA DNA repa 41.7 1E+02 0.0022 27.4 6.9 58 77-134 179-248 (310)
416 PF13167 GTP-bdg_N: GTP-bindin 41.3 1.4E+02 0.003 21.8 6.5 59 76-134 9-68 (95)
417 PF07905 PucR: Purine cataboli 41.3 65 0.0014 24.5 4.9 34 89-129 71-104 (123)
418 cd07576 R-amidase_like Pseudom 41.0 74 0.0016 27.1 5.8 22 109-130 60-81 (254)
419 PF03853 YjeF_N: YjeF-related 40.4 42 0.00091 27.1 3.9 63 92-159 100-164 (169)
420 PF13872 AAA_34: P-loop contai 39.3 21 0.00045 32.0 2.0 26 109-134 157-183 (303)
421 COG0616 SppA Periplasmic serin 38.9 2.9E+02 0.0064 24.8 9.5 45 89-134 96-140 (317)
422 PF13401 AAA_22: AAA domain; P 38.9 32 0.0007 25.7 2.9 27 108-134 71-98 (131)
423 cd01121 Sms Sms (bacterial rad 38.4 49 0.0011 30.6 4.4 52 77-130 147-206 (372)
424 PRK04301 radA DNA repair and r 37.9 1.1E+02 0.0024 27.3 6.6 57 77-134 186-254 (317)
425 cd01125 repA Hexameric Replica 37.8 87 0.0019 26.6 5.7 42 89-130 110-155 (239)
426 PRK11633 cell division protein 37.0 2.6E+02 0.0056 24.0 8.2 62 203-264 147-213 (226)
427 TIGR00665 DnaB replicative DNA 36.6 86 0.0019 29.4 5.9 40 90-129 305-350 (434)
428 cd04918 ACT_AK1-AT_2 ACT domai 36.1 84 0.0018 20.7 4.3 49 215-265 15-63 (65)
429 cd04922 ACT_AKi-HSDH-ThrA_2 AC 36.0 70 0.0015 20.6 3.9 50 214-265 15-64 (66)
430 COG0108 RibB 3,4-dihydroxy-2-b 35.1 79 0.0017 26.5 4.6 36 89-129 155-190 (203)
431 KOG3974|consensus 34.9 87 0.0019 27.6 5.0 47 77-130 92-138 (306)
432 cd01394 radB RadB. The archaea 34.7 1E+02 0.0022 25.6 5.6 45 90-134 103-159 (218)
433 cd04920 ACT_AKiii-DAPDC_2 ACT 34.7 1.3E+02 0.0029 19.6 5.5 47 215-265 15-61 (63)
434 cd01122 GP4d_helicase GP4d_hel 34.6 66 0.0014 27.8 4.5 41 90-130 140-187 (271)
435 smart00545 JmjN Small domain f 34.4 43 0.00093 20.5 2.3 21 109-129 15-35 (42)
436 PRK09485 mmuM homocysteine met 34.0 3.4E+02 0.0074 24.2 9.8 33 89-129 152-186 (304)
437 PRK09461 ansA cytoplasmic aspa 33.9 1.1E+02 0.0023 27.9 5.8 55 78-139 224-278 (335)
438 PF06153 DUF970: Protein of un 33.8 82 0.0018 23.7 4.1 51 214-268 10-67 (109)
439 smart00518 AP2Ec AP endonuclea 33.6 1.4E+02 0.0029 25.8 6.3 9 77-85 83-91 (273)
440 KOG2170|consensus 33.5 77 0.0017 28.6 4.6 13 16-32 108-120 (344)
441 cd01840 SGNH_hydrolase_yrhL_li 33.4 1.3E+02 0.0027 23.5 5.6 50 77-130 66-115 (150)
442 TIGR02238 recomb_DMC1 meiotic 33.1 1.4E+02 0.003 27.0 6.3 46 89-134 190-247 (313)
443 PLN03244 alpha-amylase; Provis 33.0 65 0.0014 33.0 4.5 32 109-140 439-470 (872)
444 PF05114 DUF692: Protein of un 32.8 43 0.00094 29.6 3.0 39 94-132 56-95 (274)
445 TIGR00259 thylakoid_BtpA membr 32.8 2.4E+02 0.0051 24.7 7.5 64 52-120 8-71 (257)
446 TIGR02237 recomb_radB DNA repa 32.7 1.5E+02 0.0032 24.4 6.2 56 77-134 86-151 (209)
447 cd01827 sialate_O-acetylestera 32.7 1.6E+02 0.0035 23.4 6.3 52 77-128 92-152 (188)
448 PF12138 Spherulin4: Spherulat 32.6 1.3E+02 0.0028 26.3 5.8 51 78-128 19-71 (253)
449 TIGR00789 flhB_rel flhB C-term 32.3 40 0.00086 24.0 2.2 23 112-134 28-50 (82)
450 PF00586 AIRS: AIR synthase re 32.1 53 0.0012 23.5 2.9 19 110-128 74-92 (96)
451 cd07581 nitrilase_3 Uncharacte 31.3 1.1E+02 0.0023 26.1 5.2 20 110-129 60-79 (255)
452 cd01822 Lysophospholipase_L1_l 30.8 1.3E+02 0.0027 23.7 5.3 52 76-128 86-139 (177)
453 cd02691 PurM-like2 AIR synthas 30.8 80 0.0017 28.9 4.5 53 111-165 106-175 (346)
454 PLN02438 inositol-3-phosphate 30.5 34 0.00074 32.8 2.0 57 77-135 247-310 (510)
455 PRK09505 malS alpha-amylase; R 30.4 1.8E+02 0.0039 29.4 7.1 29 109-137 290-318 (683)
456 PRK06512 thiamine-phosphate py 30.1 58 0.0013 27.7 3.2 48 77-131 29-78 (221)
457 TIGR03156 GTP_HflX GTP-binding 30.0 1.6E+02 0.0034 27.0 6.2 57 77-133 19-76 (351)
458 PF13407 Peripla_BP_4: Peripla 30.0 1.4E+02 0.0031 25.0 5.8 41 77-129 45-85 (257)
459 PF07505 Gp37_Gp68: Phage prot 29.7 88 0.0019 27.5 4.3 43 88-130 164-227 (261)
460 COG0542 clpA ATP-binding subun 29.6 41 0.00089 34.3 2.5 26 111-136 246-275 (786)
461 PRK08760 replicative DNA helic 29.6 1.3E+02 0.0028 28.9 5.8 41 89-129 338-384 (476)
462 PF08423 Rad51: Rad51; InterP 29.2 1.5E+02 0.0033 25.7 5.8 59 76-136 121-191 (256)
463 PF00128 Alpha-amylase: Alpha 29.2 51 0.0011 28.6 2.9 29 110-138 51-79 (316)
464 cd04501 SGNH_hydrolase_like_4 29.2 1.7E+02 0.0036 23.3 5.8 19 110-128 124-142 (183)
465 TIGR02403 trehalose_treC alpha 29.1 1.5E+02 0.0033 28.9 6.3 49 89-137 39-101 (543)
466 TIGR00416 sms DNA repair prote 29.1 1E+02 0.0022 29.4 5.0 51 77-129 159-217 (454)
467 TIGR03600 phage_DnaB phage rep 29.1 1.5E+02 0.0034 27.6 6.2 41 90-130 305-350 (421)
468 COG3964 Predicted amidohydrola 28.6 69 0.0015 28.9 3.4 55 94-156 211-271 (386)
469 cd01834 SGNH_hydrolase_like_2 28.5 2.1E+02 0.0045 22.6 6.3 53 76-128 87-151 (191)
470 PRK14105 selenophosphate synth 28.3 1.1E+02 0.0025 27.7 5.0 52 110-164 116-179 (345)
471 cd01838 Isoamyl_acetate_hydrol 28.3 1.2E+02 0.0025 24.3 4.7 53 76-128 90-160 (199)
472 PF02679 ComA: (2R)-phospho-3- 28.2 47 0.001 28.8 2.3 49 77-130 24-73 (244)
473 PLN02978 pyridoxal kinase 28.1 1.1E+02 0.0024 27.3 4.9 33 94-126 120-153 (308)
474 cd07579 nitrilase_1_R2 Second 27.8 1.3E+02 0.0029 26.3 5.3 53 77-129 17-76 (279)
475 cd01828 sialate_O-acetylestera 27.7 2.3E+02 0.0051 22.1 6.4 52 77-128 71-128 (169)
476 PLN02361 alpha-amylase 27.6 1.6E+02 0.0034 27.6 5.9 57 78-134 29-99 (401)
477 PRK11823 DNA repair protein Ra 27.6 1E+02 0.0022 29.3 4.7 51 77-129 145-203 (446)
478 PRK13600 putative ribosomal pr 27.4 49 0.0011 23.6 1.9 30 109-138 40-69 (84)
479 cd04924 ACT_AK-Arch_2 ACT doma 27.4 1.2E+02 0.0027 19.3 3.9 49 215-265 16-64 (66)
480 PRK11920 rirA iron-responsive 27.0 1.2E+02 0.0027 24.0 4.5 20 248-267 105-124 (153)
481 cd04937 ACT_AKi-DapG-BS_2 ACT 26.6 1.9E+02 0.0041 18.8 5.3 48 214-265 15-62 (64)
482 TIGR02012 tigrfam_recA protein 26.5 1.5E+02 0.0032 26.9 5.3 56 77-134 122-193 (321)
483 PF00926 DHBP_synthase: 3,4-di 26.4 2.2E+02 0.0047 23.8 5.9 37 88-129 150-186 (194)
484 PLN03186 DNA repair protein RA 26.3 1.6E+02 0.0035 26.9 5.6 46 89-134 217-274 (342)
485 KOG2040|consensus 26.2 7.1E+02 0.015 25.3 16.8 45 216-262 434-478 (1001)
486 TIGR02239 recomb_RAD51 DNA rep 26.1 1.8E+02 0.0039 26.2 5.9 46 89-134 190-247 (316)
487 cd07578 nitrilase_1_R1 First n 26.1 1.8E+02 0.0038 24.9 5.7 19 111-129 65-83 (258)
488 PRK09311 bifunctional 3,4-dihy 26.1 1E+02 0.0022 29.0 4.3 34 91-129 159-192 (402)
489 cd04440 DEP_2_P-Rex DEP (Dishe 26.0 1.1E+02 0.0023 22.4 3.5 50 185-234 3-76 (93)
490 PRK05380 pyrG CTP synthetase; 25.9 1.5E+02 0.0033 28.8 5.6 45 78-124 120-164 (533)
491 TIGR00197 yjeF_nterm yjeF N-te 25.6 1.2E+02 0.0026 25.4 4.3 63 92-159 115-179 (205)
492 PRK09165 replicative DNA helic 25.3 1.7E+02 0.0037 28.2 5.9 42 89-130 340-389 (497)
493 PRK10785 maltodextrin glucosid 25.2 2.3E+02 0.0049 28.1 6.8 61 77-137 178-252 (598)
494 TIGR03381 agmatine_aguB N-carb 25.2 1.7E+02 0.0036 25.3 5.4 19 111-129 66-84 (279)
495 smart00839 ELFV_dehydrog Gluta 25.1 2.8E+02 0.0061 20.3 5.9 51 219-269 39-96 (102)
496 cd04916 ACT_AKiii-YclM-BS_2 AC 25.1 1.5E+02 0.0033 18.9 4.1 49 215-265 16-64 (66)
497 PRK00014 ribB 3,4-dihydroxy-2- 25.1 1.1E+02 0.0024 26.3 4.0 38 91-133 173-211 (230)
498 cd01841 NnaC_like NnaC (CMP-Ne 25.1 2.7E+02 0.0059 21.8 6.3 20 109-128 115-134 (174)
499 PRK13602 putative ribosomal pr 25.0 84 0.0018 22.1 2.8 24 109-132 38-61 (82)
500 TIGR02810 agaZ_gatZ D-tagatose 24.9 3.5E+02 0.0075 25.5 7.4 63 70-134 190-259 (420)
No 1
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-66 Score=475.10 Aligned_cols=267 Identities=28% Similarity=0.463 Sum_probs=240.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc---CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS---SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||.||||+.||+|.++|||+|.+++++|++..... ..+++.++++|+|++||+++..+.++....+.
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 699999999999999999999999999999999999998765543 44566688899999999998765556666778
Q ss_pred HHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 78 QAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 78 ~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
+.+++.+.. .+.++||||+|||||+||.++||++||++|+++|+|||++||+|||||||||||+ ||+++++|+.||
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PD 285 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCC
Confidence 888886652 2345999999999999999999999999999999999999999999999999997 999999999999
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
|+|+||++++|+|+|++++++++++.... ++++.++|++++++|.++
T Consensus 286 ivt~aK~ig~G~Pl~avv~r~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e~L~~~a~~~G~~l~~~L~~l~~~~~ 365 (447)
T COG0160 286 IVTLAKSLGGGLPLSAVVGRAEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEENLLERAAELGEYLRDRLEELQEKHP 365 (447)
T ss_pred EEEecccccCCCceeEEeccHHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999984332 558999999999999988
Q ss_pred -------cCceeEEEEe-------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILL-------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~-------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+|++++++ |+.+.+.+++++|+++|+++..++.++|+|||.|||++|++++|+++++|++++++
T Consensus 366 ~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~~nviRi~PPL~is~e~~d~~l~il~~al~~ 445 (447)
T COG0160 366 LIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPHGNVLRILPPLTISDEELDEGLDILEEALKE 445 (447)
T ss_pred ceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCCCcEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 8899999998 34567899999999999999999988999999999999999999999999999986
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 446 ~ 446 (447)
T COG0160 446 A 446 (447)
T ss_pred h
Confidence 4
No 2
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-63 Score=443.49 Aligned_cols=246 Identities=30% Similarity=0.554 Sum_probs=218.0
Q ss_pred CcHHHHHHHHHHHccC---CccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTG---RQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~---r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
+||||+|+|+||+|++ |.+||+|.+||||+|++++|+++.. ++.+ .++.+.+.++| |++
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vp--------fnD-------- 173 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVP--------FND-------- 173 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecC--------CCC--------
Confidence 6999999999999997 8999999999999999999998754 4442 22333333444 444
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++++++++ +++||||+|||||+||+++++++||+++|+||++||+|||+||||||+||||+ +|+++|+|+.|||
T Consensus 174 -i~al~~ai~---~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk-~fA~e~~gV~PDI 248 (404)
T COG4992 174 -IEALEAAID---EDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGK-LFAYEHYGVEPDI 248 (404)
T ss_pred -HHHHHHHhc---cCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccch-HHHHHHhCCCCCE
Confidence 789999997 48999999999999999999999999999999999999999999999999998 9999999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|++|+||||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 249 ~tlaK~LgGG~PigA~la~~~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~ll~~v~~~g~~~~~~L~~l~~~~~ 328 (404)
T COG4992 249 LTLAKALGGGFPIGAMLATEEIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEGLLENVREKGEYLLQRLRELKRRYP 328 (404)
T ss_pred EEeeccccCCccceeeEEchhhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 9999999999999999999777776654 669999999999999996
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|+|+++++.++ ..+..+++.|+++||++.+.+ .+++||.|||++|++|||+++++|+++++.+..
T Consensus 329 ~v~~vRG~GLmiGiel~~~-~~a~~~~~~~~~~gvL~~~a~--~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 329 LVKEVRGRGLMIGIELKEP-YRARDIVRALREEGVLVLPAG--PNVIRFLPPLVITEEEIDEALDALERALAAASA 401 (404)
T ss_pred ceeeeecceeEEEEEecCc-ccHHHHHHHHHHCCeEEecCC--CCeEEecCCccCCHHHHHHHHHHHHHHHHHhhh
Confidence 899999999632 257899999999999999754 679999999999999999999999999987643
No 3
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-57 Score=426.59 Aligned_cols=266 Identities=23% Similarity=0.369 Sum_probs=226.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc-cc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM-LS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||.||||++||+|++||||+|++++++++.... .. .+....+.++|+|+.++++++...++....+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 7999999999999999999999999999999999988754221 11 223334566788888777765443445556788
Q ss_pred HHHHHHHhcC---CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~~~~---~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++++++... +++||||+|||||++|+++||++||++|+++|++||++||+|||||||||||+ +|+++++|+.|||
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~-~~a~e~~gv~PDi 295 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGK-MFAFEHAGIIPDV 295 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcH-HHHHHhcCCCCCE
Confidence 8999997432 36999999999999999999999999999999999999999999999999998 8999999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||+++||+|+|++++++++ +.+.. +++++++|++|+++|+++
T Consensus 296 v~~gKglggG~PlsAv~~~~~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 374 (464)
T PRK06938 296 VVLSKAIGGSLPLAVVVYREWL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERLREHLRQLQRDYP 374 (464)
T ss_pred EEeeccccCCCceEEEeehhHh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999885 65422 458999999999999887
Q ss_pred -------cCceeEEEEecc-------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI-------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~~-------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|+|++++++.+ ...+..+++.|+++|+++.+.+..+++|||.||+++|++|+|+++++|
T Consensus 375 ~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g~~~~~l~~~Ppl~it~~eid~~~~~l 454 (464)
T PRK06938 375 QLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELGGRHGSVVRFLPPLIITAEQIDEVAEIF 454 (464)
T ss_pred CeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHH
Confidence 699999999621 123567889999999999876555789999999999999999999999
Q ss_pred HHHHHHH
Q psy11784 262 NRIFTSL 268 (284)
Q Consensus 262 ~~~l~~~ 268 (284)
++++.++
T Consensus 455 ~~~l~~~ 461 (464)
T PRK06938 455 AEAVAAA 461 (464)
T ss_pred HHHHHHH
Confidence 9999875
No 4
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2e-57 Score=414.40 Aligned_cols=265 Identities=28% Similarity=0.442 Sum_probs=229.8
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcccc---cCCCCCceEEccCCCCcCCCCCCC-ch
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFML---SSEKKPWVHVIPFPDTYRGEFSAD-DP 70 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~ 70 (284)
|||||.|+|||++|+ +|++||++++||||.|.+++|+++..... .+.+.....++|.|+.|+.....+ ++
T Consensus 115 SeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~ 194 (449)
T COG0161 115 SEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDE 194 (449)
T ss_pred hHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChH
Confidence 899999999999995 47789999999999999999998743222 134445556789998887666433 33
Q ss_pred HHHHHHHHHHHHHHHhcC-CCeeEEEEcceecC-CCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc
Q psy11784 71 QAAQKYAQAARNIMEAHR-DNIATLICEPVFVV-HGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT 148 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~ 148 (284)
+. .+++++||++|.+++ ++|||||+|||++. ||+++||++||++++++|++||+|||+|||.|||||||+ +|++++
T Consensus 195 ~~-~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~-~FA~e~ 272 (449)
T COG0161 195 EF-AEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGK-MFACEH 272 (449)
T ss_pred HH-HHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCch-hhhhhh
Confidence 34 577999999999777 66999999999776 999999999999999999999999999999999999998 899999
Q ss_pred cCCCCcEEEecccccCC-cceeEEEecHHHHHhchh----------------------------------hhhHHHHHHH
Q psy11784 149 QGAVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC----------------------------------LDDNRPSGKY 193 (284)
Q Consensus 149 ~g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~----------------------------------l~~~~~~~~~ 193 (284)
+|++|||+|+||+|+|| +|+|++++++++.+.+.. ++++++++.+
T Consensus 273 ~gi~PDi~~~aKGLT~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~~~~~~~~~~ 352 (449)
T COG0161 273 AGIVPDILCLAKGLTGGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLLERVAEIGAY 352 (449)
T ss_pred cCCCCCeeeecccccccchhhHhHhhhHHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 99999999999999999 599999999999998765 4589999999
Q ss_pred HHHHHHh-c-----------cCceeEEEEeccc--------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 194 LVRPLGI-N-----------LHIFWCLILLSIT--------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 194 l~~~L~~-~-----------~G~~~~i~~~~~~--------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
|.++|++ + .|++.+++++.+. .....+.+.++++|++++|. ++.+.+.||+++|++|
T Consensus 353 l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~---g~~i~~~PPliit~~e 429 (449)
T COG0161 353 LQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL---GDVIYLMPPLIITREE 429 (449)
T ss_pred HHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec---CCEEEEcCCccCCHHH
Confidence 9999998 3 8999999998332 23667888999999999974 6899999999999999
Q ss_pred HHHHHHHHHHHHHHHhh
Q psy11784 254 VLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 254 id~~~~~l~~~l~~~~~ 270 (284)
||++++++.+++++...
T Consensus 430 id~l~~~l~~al~~~~~ 446 (449)
T COG0161 430 IDELVDALREALDETLA 446 (449)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987643
No 5
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-56 Score=422.05 Aligned_cols=266 Identities=27% Similarity=0.486 Sum_probs=225.9
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| ++|++||+|++||||+|.+++++++... +.. .....+..++|.|+.++++++++.++.
T Consensus 117 SEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (459)
T PRK05965 117 SDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAI 196 (459)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHH
Confidence 79999999999999 4589999999999999999888875432 211 112233456777877777665554555
Q ss_pred HHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.++++++... +++||||+|||||++|+++||++||++|+++|++||++||+|||+|||||||+ +|+++++|+
T Consensus 197 ~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~gv 275 (459)
T PRK05965 197 IAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP-LFACEAEGV 275 (459)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch-hhhHhhcCC
Confidence 6677889999998554 56999999999999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~l 194 (284)
.|||+|+||+|+||+ |+|++++++++++.+. . ++++++++++|
T Consensus 276 ~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~g~~l 355 (459)
T PRK05965 276 VPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGGLLANGQKAGPRF 355 (459)
T ss_pred CCCeEEechhhccCCcceeEEEEcHHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 999999999999995 9999999999987552 1 45899999999
Q ss_pred HHHHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
+++|+++ .|+|+++++..+. .....+.+.++++||++.+.+ .++||+.||+++|++|
T Consensus 356 ~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g--~~~i~~~PpL~it~~e 433 (459)
T PRK05965 356 AAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRAFG--DGVLGFAPALCCTEGE 433 (459)
T ss_pred HHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEecC--CcEEEEECCCcCCHHH
Confidence 9999886 8999999996211 235678899999999998643 5789999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
||+++++|+++++++.
T Consensus 434 i~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 434 FDLIFERTRKTLDDVL 449 (459)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999874
No 6
>KOG1404|consensus
Probab=100.00 E-value=3.1e-57 Score=397.76 Aligned_cols=260 Identities=35% Similarity=0.597 Sum_probs=229.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCC-chHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSAD-DPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 77 (284)
|||||.|+||||.|||+..||++.+||||+|..++++++...... ++...++++.+.|+.+|+.+..+ .++..+++.
T Consensus 119 sEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a 198 (442)
T KOG1404|consen 119 SEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYA 198 (442)
T ss_pred chHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHH
Confidence 799999999999999999999999999999999998886543332 34444566788899999998765 445678889
Q ss_pred HHHHHHHHhcCC-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 78 QAARNIMEAHRD-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 78 ~~l~~~i~~~~~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++++.+....+ .+||+|.|||||.||.+.+|++||++++++|+++|.++|+|||||||||||. +|+++..|+.|||+
T Consensus 199 ~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~-~wgfe~h~v~PDIv 277 (442)
T KOG1404|consen 199 KELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGH-MWGFESHGVVPDIV 277 (442)
T ss_pred HHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccc-cccccccCCCccHH
Confidence 999999874444 4999999999999999999999999999999999999999999999999995 99999999999999
Q ss_pred EecccccCCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
|++|++|+|+|+||+++++||++.+.+ .++..+.|.+|+++|.++
T Consensus 278 TmAKgiGnG~Pl~AVvtt~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~vG~yl~~~l~~l~d~h~ 357 (442)
T KOG1404|consen 278 TMAKGIGNGFPLGAVVTTPEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAEVGSYLLEKLAALKDKHP 357 (442)
T ss_pred HHHhhccCCCcceeeecCHHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999998766 347888999999999988
Q ss_pred -------cCceeEEEEec--------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS--------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~--------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
+|||+++|++. .......+.+.++++|+++..++..++++|+.||+++|++|+|.+++.+
T Consensus 358 iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 358 IIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGNVFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred ceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccceEEEecCCeeccHHHHHHHHHHH
Confidence 89999999982 2345677899999999999888888999999999999999998888766
No 7
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2e-56 Score=420.02 Aligned_cols=268 Identities=22% Similarity=0.391 Sum_probs=222.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++.. ++.. .+....+.++|+|+.++++++...++..+.+.+
T Consensus 131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (459)
T PRK06931 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 79999999999999999999999999999999999877542 2211 223344566899998888876432233333344
Q ss_pred HHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++.++. ..+++||||+|||||++|++++|++||++|+++|++||++||+|||||||||||+ +|+++++|++|||
T Consensus 211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~-~~a~~~~gv~PDi 289 (459)
T PRK06931 211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK-MFAFEHAGIEPDI 289 (459)
T ss_pred HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch-HHHhhhcCCCCCE
Confidence 45555542 3345999999999999999999999999999999999999999999999999998 8999999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||+++||+|+|++++++++ +.+.. ++++++++++|+++|+++
T Consensus 290 vt~gK~l~gG~Pi~av~~~~~~-~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 368 (459)
T PRK06931 290 IVMSKAVGGGLPLAVLGIKKEF-DAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLKAQLAELQKRYP 368 (459)
T ss_pred EEecccccCCcceeeeeeHHHH-hhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999998774 65532 458999999999999887
Q ss_pred -------cCceeEEEEecc-------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI-------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~~-------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|+|+++++..+ ......+.+.|+++|+++.+.+..++++||.||+++|++|||+++++|
T Consensus 369 ~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~eid~~~~~l 448 (459)
T PRK06931 369 CIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLPPLLITQAECEEFIDRF 448 (459)
T ss_pred CeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCCCcCHHHHHHHHHHH
Confidence 899999999621 123567888999999999876556789999999999999999999999
Q ss_pred HHHHHHHhh
Q psy11784 262 NRIFTSLQM 270 (284)
Q Consensus 262 ~~~l~~~~~ 270 (284)
+++++++.+
T Consensus 449 ~~~l~~~~~ 457 (459)
T PRK06931 449 EQALLAAVK 457 (459)
T ss_pred HHHHHHHHh
Confidence 999987643
No 8
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=3.9e-56 Score=417.65 Aligned_cols=267 Identities=26% Similarity=0.454 Sum_probs=224.9
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||.|| +|++||+|+++|||+|++++++++...... .+....+.++|.|+.++.++....+..
T Consensus 115 seA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (451)
T PRK07678 115 SEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIY 194 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHH
Confidence 799999999999996 688999999999999999998876432211 223344556788888877665433444
Q ss_pred HHHHHHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
..++++.++++++ ..++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+
T Consensus 195 ~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~~~~~~gv 273 (451)
T PRK07678 195 DLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK-AFGFMNYGV 273 (451)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch-hHHHHhcCC
Confidence 5566788888887 34567999999999999999999999999999999999999999999999999998 889999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhch---------h--------------------------hhhHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLN---------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~---------~--------------------------l~~~~~~~~~l~ 195 (284)
.|||+|+||+|+|| +|+|++++++++++.+. . ++++++++++|+
T Consensus 274 ~PDivt~gK~lggG~~Pi~av~~~~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 353 (451)
T PRK07678 274 KPDIITMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLL 353 (451)
T ss_pred CCCEEEeecccccCCcceeEEEEcHHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999 69999999999988653 1 458899999999
Q ss_pred HHHHhc------------cCceeEEEEec--------ccHHHHHHHHHHHHCCcEEeecCC----CCCEEEEEcCCCCCH
Q psy11784 196 RPLGIN------------LHIFWCLILLS--------ITYYLYRYTRRMKEAKIIVANEGE----YGNVLLFLPAMCLTT 251 (284)
Q Consensus 196 ~~L~~~------------~G~~~~i~~~~--------~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~lr~~p~l~~t~ 251 (284)
+.|+++ .|+|+++++.. +...+..+++.|+++||++.+.++ .+++|||+||+++|+
T Consensus 354 ~~l~~~~~~~~~v~~vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~~~~g~~v~~~~~~lrl~Ppl~it~ 433 (451)
T PRK07678 354 EQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNVLTLSPPLVISS 433 (451)
T ss_pred HHHHHHHhcCCCEEEEEeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEEeecCccccCCCCEEEEECCCcCCH
Confidence 999754 79999999962 123467889999999999976432 248999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~ 268 (284)
+|||+++++|+++++++
T Consensus 434 ~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 434 EEIAFIVGTLKTALERI 450 (451)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999765
No 9
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=9.8e-56 Score=415.84 Aligned_cols=264 Identities=21% Similarity=0.366 Sum_probs=223.1
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| ++|++||+|++||||+|.+++++++.. ++.. .+....+.++|+|+.++..+....++.
T Consensus 139 SEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~ 218 (472)
T PRK08742 139 SAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDY 218 (472)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHH
Confidence 79999999999999 568999999999999999999987543 2211 222334556788888877665544455
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.++++++...+++||||+|| +||++|++++|++||++|+++|++||++||+|||||||||||+ +|+++++|+
T Consensus 219 ~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~-~~a~e~~gv 297 (472)
T PRK08742 219 ALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT-LFACEQAGV 297 (472)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chHHHhcCC
Confidence 55678888888876566799999999 6999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCCc-ceeEEEecHHHHHhch---------h--------------------------hhhHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGM-PIGAVITSRKIAESLN---------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~---------~--------------------------l~~~~~~~~~l~ 195 (284)
.|||+|+||+|+||+ |+|++++++++++.+. . ++++++++++|+
T Consensus 298 ~PDiv~~gKgl~gG~~Plaav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~l~~~~~~~g~~l~ 377 (472)
T PRK08742 298 MPDLLCLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIARNQPTAARMT 377 (472)
T ss_pred CCCEEEEcccccCCCCCcceeeccHHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 999999999999995 9999999999988652 0 458888999998
Q ss_pred HHHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENV 254 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~i 254 (284)
+.++.+ .|+|++++++.+. .....+.+.++++||++.+. +++|||.||+++|++||
T Consensus 378 ~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g~vi~~~PpL~it~~ei 454 (472)
T PRK08742 378 QLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL---GDVLYWMPPYCVDEAQL 454 (472)
T ss_pred HHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHH
Confidence 777664 8999999996211 12467888999999999864 48999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy11784 255 LFIVSTLNRIFTSL 268 (284)
Q Consensus 255 d~~~~~l~~~l~~~ 268 (284)
|+++++|+++++++
T Consensus 455 ~~~~~~l~~~l~~~ 468 (472)
T PRK08742 455 ALLADTTRHAIDEA 468 (472)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999875
No 10
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-55 Score=413.85 Aligned_cols=268 Identities=24% Similarity=0.368 Sum_probs=225.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCC----CchHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSA----DDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 73 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++.. .+.. ......+.++|+|+.++.++.. +.++..
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 79999999999999999999999999999999998876531 1111 2233445567888877765432 223445
Q ss_pred HHHHHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 74 QKYAQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 74 ~~~~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
+.+++.+++.+.. .++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~g 281 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK-WFASEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCch-HHHHHhcC
Confidence 5667788887743 2456999999999999999999999999999999999999999999999999998 88999999
Q ss_pred CCCcEEEecccccCCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 151 AVPDIITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
+.|||+|+||+++||+|+|++++++++++.... ++++++++++|+++|+++
T Consensus 282 v~PDiv~~gK~l~gG~pi~av~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~ 361 (457)
T PRK05639 282 VKPDLIIFGKGVASGMGLSGVIGRKELMDLTSGSALLTPAANPVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMK 361 (457)
T ss_pred CCCCEEEechhhcCCCcceeEEehHHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999984321 458889999999999885
Q ss_pred -----------cCceeEEEEec-----ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 -----------LHIFWCLILLS-----ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 -----------~G~~~~i~~~~-----~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|+|+++++.. +...+..+++.|+++|+++.+.+..+++|||.||+++|++|+|+++++|++++
T Consensus 362 ~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~g~~~~~lr~~Ppl~it~~~id~~~~~l~~~l 441 (457)
T PRK05639 362 ESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSYGMFGNVIRITPPLVITKEIAEKGLEIMERAI 441 (457)
T ss_pred HhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHH
Confidence 78999999862 22356789999999999998765556899999999999999999999999999
Q ss_pred HHHh
Q psy11784 266 TSLQ 269 (284)
Q Consensus 266 ~~~~ 269 (284)
+++.
T Consensus 442 ~~~~ 445 (457)
T PRK05639 442 KDAL 445 (457)
T ss_pred HHHH
Confidence 8874
No 11
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-55 Score=412.34 Aligned_cols=268 Identities=28% Similarity=0.427 Sum_probs=221.2
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCC-CCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFS-ADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~-~~~~~ 71 (284)
|||||+|||+||+| ++|++||+|+++|||+|.+++++++..... . .+......++|.|+.|+.... .+.++
T Consensus 100 sEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (443)
T PRK07483 100 SEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEA 179 (443)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHH
Confidence 79999999999999 789999999999999999999987643221 1 122223345666666665432 22234
Q ss_pred HHHHHHHHHHHHHHh-cCCCeeEEEEcceec-CCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc
Q psy11784 72 AAQKYAQAARNIMEA-HRDNIATLICEPVFV-VHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ 149 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~-~~~~vaavi~Epv~~-~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~ 149 (284)
....+++++++++.. ..+++||||+||||| .+|+++||++||++|+++|++||++||+|||||||||||+ +|+++++
T Consensus 180 ~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~-~~a~~~~ 258 (443)
T PRK07483 180 YGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGT-LFACEED 258 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcH-HHHHhhc
Confidence 455667888887763 445699999999999 5899999999999999999999999999999999999998 8999999
Q ss_pred CCCCcEEEecccccCCc-ceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHH
Q psy11784 150 GAVPDIITVGKPMGNGM-PIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 150 g~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~ 195 (284)
|++|||+|+||+++||+ |+|++++++++++.+.. ++++++++++|+
T Consensus 259 gv~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~~~~~~g~~l~ 338 (443)
T PRK07483 259 GVAPDLVTIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLR 338 (443)
T ss_pred CCCCCeeeehhhhccCccccEEEEEcHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999996 99999999999876521 458999999999
Q ss_pred HHHHhc------------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCC
Q psy11784 196 RPLGIN------------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMC 248 (284)
Q Consensus 196 ~~L~~~------------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~ 248 (284)
++|+++ .|+|+++++..+ ......+++.++++||++.+.+. .+++|||.||++
T Consensus 339 ~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~~~~~~~~l~~~PpL~ 418 (443)
T PRK07483 339 ARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGVRGDHVLLAPPFI 418 (443)
T ss_pred HHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccccCCCCCEEEEECCCC
Confidence 999874 899999999621 12356789999999999986532 258999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHh
Q psy11784 249 LTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~~ 269 (284)
+|++|||+++++|+++++++.
T Consensus 419 it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 419 ITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred CCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998764
No 12
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-55 Score=414.18 Aligned_cols=266 Identities=23% Similarity=0.336 Sum_probs=221.0
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccc-cc-CCCCCceEEccCCCCcCCCC-CCCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFM-LS-SEKKPWVHVIPFPDTYRGEF-SADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 71 (284)
|||||+|||+||+|+ +|++||+|++||||+|.+++++++.... .. ......+.++|.|+.+++++ +...++
T Consensus 121 SEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (461)
T PRK07482 121 SDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQ 200 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHH
Confidence 799999999999884 5899999999999999999988764321 11 22233345577777766543 222234
Q ss_pred HHHHHHHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+++.+++++++. ++++||||+|||||++|++++|++||++|+++|++||++||+|||+|||||||+ +|+++++|
T Consensus 201 ~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~-~~a~~~~g 279 (461)
T PRK07482 201 FSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS-MFGSDHYG 279 (461)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc-hhhHHhcC
Confidence 4556788999988643 456999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
++||++|+||+++||+ |+|++++++++++.+. . ++++++++++
T Consensus 280 v~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~l~~~~~~~g~~ 359 (461)
T PRK07482 280 IEPDLITVAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAY 359 (461)
T ss_pred CCCCEEEEccccccCccccceeeecHHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999996 9999999999987653 1 4589999999
Q ss_pred HHHHHHhc------------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCH
Q psy11784 194 LVRPLGIN------------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTT 251 (284)
Q Consensus 194 l~~~L~~~------------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 251 (284)
|+++|+++ .|+|++++++.+. ..+..++..|+++||++.+. +.++++||.||+++|+
T Consensus 360 l~~~L~~l~~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-~~~~~i~~~Ppl~it~ 438 (461)
T PRK07482 360 FRARLRAAFGDHPLVGEVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVIARAM-PHGDILGFAPPLVLTR 438 (461)
T ss_pred HHHHHHHHHhcCCCEEEEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcEEecC-CCCCEEEEeCCCCCCH
Confidence 99999865 8999999996211 13567899999999998653 2368999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~ 268 (284)
+|||+++++|+++++++
T Consensus 439 ~ei~~~~~~l~~~l~~~ 455 (461)
T PRK07482 439 AEADEIVAIAKDAVDEV 455 (461)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999876
No 13
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-55 Score=412.73 Aligned_cols=264 Identities=20% Similarity=0.350 Sum_probs=223.7
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| ++|++||+|++||||+|.+++++++..... . ........++|+|+.++.++....++.
T Consensus 124 seAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (453)
T PRK06943 124 ASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADV 203 (453)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHH
Confidence 79999999999876 478999999999999999999988643221 1 222333455788876665554433445
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.++++++.+++++||||+|| +||++|++++|++||++|+++|++||++||+|||||||||||+ +|+++++|+
T Consensus 204 ~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~-~fa~~~~gv 282 (453)
T PRK06943 204 AARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT-FFACEQAGV 282 (453)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc-hhHHHhCCC
Confidence 55678889999986667799999999 5999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhch---------h--------------------------hhhHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLN---------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~---------~--------------------------l~~~~~~~~~l~ 195 (284)
.|||+|+||+|+|| +|+|++++++++++.+. . ++++++++++|+
T Consensus 283 ~PDivt~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~G~~l~ 362 (453)
T PRK06943 283 WPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLARNARKSARLR 362 (453)
T ss_pred CCCeEeeehhhccCcccceEEEEcHHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999 59999999999998653 1 458899999999
Q ss_pred HHHHhc-----------cCceeEEEEecc----cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSI----TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVST 260 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~ 260 (284)
++|+++ .|+|+++++..+ ......+.+.++++||++.+. ++++||.||+++|++|||+++++
T Consensus 363 ~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~---g~~l~~~Ppl~it~~eid~~~~~ 439 (453)
T PRK06943 363 AALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEAALERELLLRPI---GTTVYLMPPYVLDDDEIAWLAER 439 (453)
T ss_pred HHHHHHhcCCCEEeEeccccEEEEEEccCCCcchHHHHHHHHHHHHCCcEEEec---CCEEEEeCCCcCCHHHHHHHHHH
Confidence 999886 899999999622 124667889999999999864 36899999999999999999999
Q ss_pred HHHHHHHH
Q psy11784 261 LNRIFTSL 268 (284)
Q Consensus 261 l~~~l~~~ 268 (284)
|+++++++
T Consensus 440 l~~al~~~ 447 (453)
T PRK06943 440 TRATLDAT 447 (453)
T ss_pred HHHHHHHH
Confidence 99999886
No 14
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-55 Score=413.11 Aligned_cols=264 Identities=26% Similarity=0.420 Sum_probs=222.9
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCC-CchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSA-DDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~ 71 (284)
|||||+|||+||+|+ +|++||+|++||||+|.+++++++...... .+....+.++|.|+.++++++. +.+.
T Consensus 114 sEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~ 193 (449)
T PRK07481 114 SDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEE 193 (449)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHH
Confidence 699999999999995 789999999999999999998875432211 2233345567888888888773 3334
Q ss_pred HHHHHHHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+.+.+|+++. ..++++||||+|||||++|.++||++||++|+++|++||++||+|||+|||||+|+ +|+++++|
T Consensus 194 ~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~g 272 (449)
T PRK07481 194 LARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS-WFGSRGWG 272 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch-hhHhhhcC
Confidence 44556778888887 34567999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
+.|||+|+||+++||+ |+|++++++++++.+. . ++++++++++
T Consensus 273 v~PDiv~~gKgl~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~ 352 (449)
T PRK07481 273 VKPDIMCLAKGITSGYVPLGATMVNARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPANAAKRGAY 352 (449)
T ss_pred CCCCEEEEeecccCCCcCceEEEEcHHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 9999999999999995 9999999999988753 1 4588899999
Q ss_pred HHHHHHhc------------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCH
Q psy11784 194 LVRPLGIN------------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTT 251 (284)
Q Consensus 194 l~~~L~~~------------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 251 (284)
|++.|+++ .|+|+++++..+ ......+.+.|+++||++.+. ++.+||.||+++|+
T Consensus 353 l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g~~i~l~Ppl~it~ 429 (449)
T PRK07481 353 LLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRPS---GTKIILSPPLVIQR 429 (449)
T ss_pred HHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEec---CCEEEEECCCCCCH
Confidence 99999886 899999999621 124567888999999999864 35799999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~ 268 (284)
+|||+++++|+++++++
T Consensus 430 ~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 430 EDVDRIVDALDAGLSAV 446 (449)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999875
No 15
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=2.4e-55 Score=412.12 Aligned_cols=265 Identities=27% Similarity=0.423 Sum_probs=222.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc-CCCCCceEEccCCCCcCCCCCC-CchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS-SEKKPWVHVIPFPDTYRGEFSA-DDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++||+|+++|||+|.+++++++...... ......+..+|.|+.++.++.. ++++....+++
T Consensus 122 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 201 (451)
T PRK06062 122 ADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALA 201 (451)
T ss_pred HHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHH
Confidence 699999999999999999999999999999999998875432221 1222334456777777766531 22345566788
Q ss_pred HHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 79 AARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 79 ~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
.++++++.. ++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+.|||+|
T Consensus 202 ~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~-~~a~~~~gv~PDi~t 280 (451)
T PRK06062 202 HLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGK-WFAIEHFGVVPDLIT 280 (451)
T ss_pred HHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcH-HHHHHhcCCCCCeee
Confidence 999999754 356999999999999999999999999999999999999999999999999998 889999999999999
Q ss_pred ecccccCCc-ceeEEEecHHHHHhchh-------------------------------hhhHHHHH-HHHHHHHHhc---
Q psy11784 158 VGKPMGNGM-PIGAVITSRKIAESLNC-------------------------------LDDNRPSG-KYLVRPLGIN--- 201 (284)
Q Consensus 158 ~sK~l~~G~-p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~-~~l~~~L~~~--- 201 (284)
+||+++||+ |+|++++++++++.+.. +++++++| ++|++.|+++
T Consensus 281 ~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l~~~L~~l~~~ 360 (451)
T PRK06062 281 FAKGVNSGYVPLGGVAISEAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAER 360 (451)
T ss_pred echhhhcCCcCcEEEEEcHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999995 99999999999987632 45788888 5888888876
Q ss_pred ---------cCceeEEEEeccc-------------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSIT-------------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 202 ---------~G~~~~i~~~~~~-------------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.|+|+++++..+. .....+++.|+++||++.+ .++++||.||+++|++|||++++
T Consensus 361 ~~~v~~vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl~~~---~~~~lrl~ppl~~t~~eid~~~~ 437 (451)
T PRK06062 361 HPSVGEVRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLLPFV---NGNRIHVVPPCTVTEDEVREGLA 437 (451)
T ss_pred CCcEEeEeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcEEee---cCCEEEEECCccCCHHHHHHHHH
Confidence 8999999986211 1356789999999999875 25799999999999999999999
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
+|+++++++.
T Consensus 438 ~l~~~l~~~~ 447 (451)
T PRK06062 438 ILDAALAVAD 447 (451)
T ss_pred HHHHHHHHhh
Confidence 9999998864
No 16
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.6e-55 Score=411.25 Aligned_cols=265 Identities=21% Similarity=0.348 Sum_probs=225.7
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||+| |+|++||+|++||||+|.+++++++... +.. .+......++|+|++++..++...++.
T Consensus 117 sEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~ 196 (466)
T PRK07030 117 SSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEH 196 (466)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHH
Confidence 79999999999998 5789999999999999999998876432 111 222233456788888777665544455
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.++++++.+++++||||+|| |||++|++++|++||++|+++|++||++||+|||+|||||||+ +|+++++|+
T Consensus 197 ~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~-~~a~~~~gv 275 (466)
T PRK07030 197 SRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT-MFACEQAGI 275 (466)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc-chHHHhcCC
Confidence 56678889999986667799999999 7999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~l 194 (284)
.|||+|+||+|+||+ |+|++++++++++.+. . ++++++++++|
T Consensus 276 ~PDiv~~gKgl~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~G~~l 355 (466)
T PRK07030 276 RPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRM 355 (466)
T ss_pred CCCEEeeehhccCCcccceEEEecHHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999995 9999999999988652 1 45899999999
Q ss_pred HHHHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
++.|+++ .|+|+++++..+. .....+.+.|+++||++.+. ++++||.||+++|++|
T Consensus 356 ~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g~~i~~~Ppl~it~~e 432 (466)
T PRK07030 356 AEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL---GSVVYFLPPYVITPEQ 432 (466)
T ss_pred HHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEec---CCEEEEECCccCCHHH
Confidence 9999886 8999999996211 12357889999999999863 4799999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
||+++++|+++++++.
T Consensus 433 id~~~~~l~~al~~~~ 448 (466)
T PRK07030 433 IDFLAEVASEGIDIAT 448 (466)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999983
No 17
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-55 Score=443.20 Aligned_cols=268 Identities=37% Similarity=0.635 Sum_probs=233.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++..++.. .+.++.++..+.|+.++.+++.++.+....+.+
T Consensus 690 sEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 769 (1013)
T PRK06148 690 SEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAE 769 (1013)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHH
Confidence 799999999999999999999999999999999999887544432 233455666788888888887654555666777
Q ss_pred HHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++.++ ..++++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+++|+++++|+.|||
T Consensus 770 ~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDi 849 (1013)
T PRK06148 770 SVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDI 849 (1013)
T ss_pred HHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCcce
Confidence 7887775 2345699999999999999999999999999999999999999999999999999657899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+|+||++|||+|+|++++++++++.+.. +++++++|++|+++|+++
T Consensus 850 vt~gK~lggG~Plgav~~~~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~~ 929 (1013)
T PRK06148 850 VTMGKPIGNGHPMGAVVTTREIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRF 929 (1013)
T ss_pred eeecccccCCcceEEEEEcHHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999987632 458999999999999886
Q ss_pred --------cCceeEEEEec-------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLS-------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --------~G~~~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++.. +...+..+++.|+++||++.+.++.++++||.||+++|++|||+++++|+++++
T Consensus 930 ~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g~~~~vlr~~Ppl~it~~~id~~l~~l~~~l~ 1009 (1013)
T PRK06148 930 DIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHLLEVLDDVLA 1009 (1013)
T ss_pred CCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHH
Confidence 79999999962 123467789999999999998777779999999999999999999999999998
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
++
T Consensus 1010 ~~ 1011 (1013)
T PRK06148 1010 AA 1011 (1013)
T ss_pred HH
Confidence 75
No 18
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-54 Score=405.88 Aligned_cols=273 Identities=23% Similarity=0.356 Sum_probs=227.7
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc--cCCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML--SSEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| |+|++|++|+++|||+|++++++++..... ...+...+.++|.|+.++++++++.+..
T Consensus 101 sEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 180 (447)
T PRK06917 101 SEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTC 180 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHH
Confidence 79999999999887 679999999999999999999877543211 1222233445677777776665544455
Q ss_pred HHHHHHHHHHHHHhcC-CCeeEEEEcceecC-CCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 73 AQKYAQAARNIMEAHR-DNIATLICEPVFVV-HGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
...+++.++++++.+. +++||||+||+||+ ||+++||++||++|+++|++||++||+|||+|||||+|+ +|+++++|
T Consensus 181 ~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~-~~a~~~~g 259 (447)
T PRK06917 181 QLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA-MFAMEHWG 259 (447)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc-hhhHHhcC
Confidence 5567788999888654 46999999999995 779999999999999999999999999999999999998 89999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~ 196 (284)
+.||++|+||+++||+ |+|++++++++++.+.. ++++++++++|++
T Consensus 260 v~PDi~~~gK~l~~G~~Pi~a~~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~ 339 (447)
T PRK06917 260 VEPDIMTLGKGLGAGYTPIAATVVSDRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIK 339 (447)
T ss_pred CCCCEEEeeehhccCCcceEEEEEcHHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 9999999999999996 99999999999886531 4589999999999
Q ss_pred HHHhc------------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEEcCCCC
Q psy11784 197 PLGIN------------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEG-----EYGNVLLFLPAMCL 249 (284)
Q Consensus 197 ~L~~~------------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~lr~~p~l~~ 249 (284)
.|+++ .|+|++++++.+ ......+++.|+++||++.+.+ ..++++|+.||+++
T Consensus 340 ~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~g~~~~~i~l~Ppl~i 419 (447)
T PRK06917 340 GLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDGKEGDAVIIAPPMTI 419 (447)
T ss_pred HHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEecccccCCCCCCEEEEECCCcC
Confidence 99886 899999999621 1346778999999999998752 23689999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhhccch
Q psy11784 250 TTENVLFIVSTLNRIFTSLQMDSSP 274 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~~~~~~ 274 (284)
|++|||+++++|+++++++.++.++
T Consensus 420 t~~eid~~~~~l~~~l~~~~~~~~~ 444 (447)
T PRK06917 420 TYSELDELLSIFAKSVEEMMQKGGH 444 (447)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999998765544
No 19
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.5e-54 Score=407.60 Aligned_cols=265 Identities=22% Similarity=0.412 Sum_probs=225.6
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||+| |+|++||+|++||||+|.+++++++..... . .+......++|+|+.++++++.+.++.
T Consensus 126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 205 (460)
T PRK06916 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI 205 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 79999999999985 679999999999999999999887643221 1 222333456788888877665444455
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.+++.++.+++++||||+|| |||++|++++|++||++|+++|++||++||+|||+|||||+|+ +|+++++|+
T Consensus 206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~-~~a~~~~gv 284 (460)
T PRK06916 206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGK-MFACEHENV 284 (460)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCch-hhHHHhcCC
Confidence 66678889999986667899999999 6999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKYL 194 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~l 194 (284)
.|||+|+||+|+|| +|+|++++++++++.+. . ++++++++++|
T Consensus 285 ~PDiv~~gK~l~gG~~Pi~av~~~~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~l~~~~~~~g~~l 364 (460)
T PRK06916 285 TPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYV 364 (460)
T ss_pred CCCeeeeehhhhcCccccceeeecHHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 99999999999999 59999999999987542 0 45899999999
Q ss_pred HHHHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
++.|+++ .|+|+++++..+. .....+++.|+++||++.+. ++++||.||+++|++|
T Consensus 365 ~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g~~l~~~Ppl~it~~~ 441 (460)
T PRK06916 365 ATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLTRPL---GNTIVFMPPLASTIDE 441 (460)
T ss_pred HHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEEEec---CCEEEEeCCcccCHHH
Confidence 9999876 8999999996211 12467889999999999864 4799999999999999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
||+++++|+++++++.
T Consensus 442 id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 442 LDEMLRILYKAISDVT 457 (460)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999998764
No 20
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=100.00 E-value=3.1e-54 Score=404.24 Aligned_cols=267 Identities=21% Similarity=0.372 Sum_probs=222.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++||+|+++|||+|.+++++++.. ++.. ......+.++|+|+.++.+++...+...+.+.+
T Consensus 112 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (442)
T TIGR00709 112 ADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIE 191 (442)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 69999999999999999999999999999999999887632 1111 122334456788888888776443333334444
Q ss_pred HHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++.++. ..+++||||+||+||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|+.|||
T Consensus 192 ~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv~PDi 270 (442)
T TIGR00709 192 YFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGT-MFAFEHAGIEPDF 270 (442)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHHcCCCCcE
Confidence 55665542 2356999999999999999999999999999999999999999999999999998 8999999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||++++|+|+|+++++++ ++.+.. ++++++++++|++.|+++
T Consensus 271 v~~gK~l~~G~Pigav~~~~~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 349 (442)
T TIGR00709 271 VVMSKAVGGGLPLAVLLIAPE-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFLDDMIKEHP 349 (442)
T ss_pred EEEcccccCCcccEEEEEchH-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999988 454421 458899999999999876
Q ss_pred -------cCceeEEEEecc-------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI-------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~~-------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|+|+++++..+ ...+..+...|+++||++.+.+..+++|||.||+++|++|+|+++++|
T Consensus 350 ~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~~~l~~~Ppl~it~~ei~~~~~~l 429 (442)
T TIGR00709 350 CIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGREGEVFRLLCPITIDQEECEEGISRF 429 (442)
T ss_pred CeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCCCCHHHHHHHHHHH
Confidence 899999999622 123567888999999999876656799999999999999999999999
Q ss_pred HHHHHHHh
Q psy11784 262 NRIFTSLQ 269 (284)
Q Consensus 262 ~~~l~~~~ 269 (284)
+++++++.
T Consensus 430 ~~~l~~~~ 437 (442)
T TIGR00709 430 KQAVEEAL 437 (442)
T ss_pred HHHHHHHH
Confidence 99998764
No 21
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-54 Score=405.19 Aligned_cols=264 Identities=29% Similarity=0.462 Sum_probs=217.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCC--CchHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSA--DDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 75 (284)
|||||+|+|+||+||||++||+|.++|||+|.+++++++.. +... ..........|.|+.++.+... +.++....
T Consensus 127 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (443)
T PRK06058 127 AEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAAR 206 (443)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHH
Confidence 79999999999999999999999999999999999887532 1211 1223334445666555433111 11233334
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++.+++.+. ++++||||+||+||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+.||+
T Consensus 207 ~~~~l~~~~~--~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~-~fa~~~~gv~PDi 283 (443)
T PRK06058 207 AITVIEKQVG--ADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGA-WFACEHEGIVPDL 283 (443)
T ss_pred HHHHHHHhhC--CCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChh-hhHHHhcCCCCCE
Confidence 4555555442 456999999999999999999999999999999999999999999999999998 8899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||+++||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 284 v~~gK~l~~G~Pi~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 363 (443)
T PRK06058 284 ITTAKGIAGGLPLSAVTGRAEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEEDDLVARARQIEALMTDRLRALAAEDD 363 (443)
T ss_pred EEEcccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999987753 458889999999999876
Q ss_pred -------cCceeEEEEecc------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~~~------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+|+++++.++ ......+.+.|+++||++.+.+.++++|||.||+++|++|||+++++|++++++
T Consensus 364 ~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 364 RIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGTYGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred cEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 789999999632 234677889999999999987666789999999999999999999999999865
No 22
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=4.6e-54 Score=403.72 Aligned_cols=266 Identities=22% Similarity=0.335 Sum_probs=220.3
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| ++|++||+|+++|||+|.+++++++..... . +.....+.++|+|++++++.+.+.++.
T Consensus 121 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 200 (456)
T PRK07480 121 SEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEF 200 (456)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHH
Confidence 79999999999999 568899999999999999988887543211 1 122233445777887776654333444
Q ss_pred HHHHHHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.+++.+. ..++++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|+
T Consensus 201 ~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~a~~~~gv 279 (456)
T PRK07480 201 GLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE-WFGSQHFGI 279 (456)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc-hhhhhhcCC
Confidence 4555778876665 34456999999999999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCCc-ceeEEEecHHHHHhch--h-------------------------------hhhH-HHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNGM-PIGAVITSRKIAESLN--C-------------------------------LDDN-RPSGKYLVR 196 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~--~-------------------------------l~~~-~~~~~~l~~ 196 (284)
.|||+|+||+++||+ |+|++++++++++.+. . ++++ ++++++|++
T Consensus 280 ~PDiv~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~~g~~l~~ 359 (456)
T PRK07480 280 KPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQK 359 (456)
T ss_pred CCCeeeeehhhccCCccceEEEEcHHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999995 9999999999998772 1 4578 589999999
Q ss_pred HHHhc-----------cCceeEEEEeccc----------HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 197 PLGIN-----------LHIFWCLILLSIT----------YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 197 ~L~~~-----------~G~~~~i~~~~~~----------~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
+|+++ .|+|++++++.+. .....+.+.|+++||++.+. ++++||.||+++|++|||
T Consensus 360 ~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~~~l~~~Ppl~it~~eid 436 (456)
T PRK07480 360 RLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV---GDRMIISPPLVITHAEID 436 (456)
T ss_pred HHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec---CCEEEEECCCCCCHHHHH
Confidence 99876 8999999996221 12356778899999999853 479999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy11784 256 FIVSTLNRIFTSLQM 270 (284)
Q Consensus 256 ~~~~~l~~~l~~~~~ 270 (284)
+++++|+++++++.+
T Consensus 437 ~~~~~l~~al~~~~~ 451 (456)
T PRK07480 437 ELVEKARKALDATAA 451 (456)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988754
No 23
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=7.8e-54 Score=403.16 Aligned_cols=265 Identities=26% Similarity=0.422 Sum_probs=222.0
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| |+|++||+|++||||+|.+++++++...... ......+.++|.|+.++.+.+...++.
T Consensus 122 seAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 201 (466)
T PRK07036 122 STAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAF 201 (466)
T ss_pred hHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHH
Confidence 79999999999999 4689999999999999999988876432211 222334556788887776655433444
Q ss_pred HHHHHHHHHHHHHh-cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc-ccC
Q psy11784 73 AQKYAQAARNIMEA-HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ-TQG 150 (284)
Q Consensus 73 ~~~~~~~l~~~i~~-~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~-~~g 150 (284)
...+++.+++.+.. .++++||||+|||||++|+++||++||++|+++|++||++||+|||+|||||+|+ +|+++ ++|
T Consensus 202 ~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-~~~~~~~~g 280 (466)
T PRK07036 202 CDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH-FFASEAVFG 280 (466)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch-hhhhhhhcC
Confidence 55567788888764 4566999999999999999999999999999999999999999999999999998 78888 789
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
+.|||+|+||+++||+ |+|++++++++++.+. . ++++++++++
T Consensus 281 v~PDivt~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~~l~~~~~~~g~~ 360 (466)
T PRK07036 281 IQPDIITFAKGLTSGYQPLGAVIISERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMEREGLCEHVREVGPY 360 (466)
T ss_pred CCCCEEEEccccccCccccEEEEEcHHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999995 9999999999988642 0 4589999999
Q ss_pred HHHHHHhc-----------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
|+++|+++ .|+|+++++..+ ......+.+.|+++||++.+. ++.+|+.||+++|++
T Consensus 361 l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---~~~~~l~Ppl~it~~ 437 (466)
T PRK07036 361 FEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL---EHLCVLSPPLIITRA 437 (466)
T ss_pred HHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEeec---CCEEEEeCCCcCCHH
Confidence 99999875 899999999621 123567888999999999863 378999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy11784 253 NVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~ 269 (284)
|||+++++|+++++++.
T Consensus 438 ~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 438 QIDEIVAILRAAIEETA 454 (466)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998874
No 24
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=3e-54 Score=402.42 Aligned_cols=246 Identities=26% Similarity=0.466 Sum_probs=207.3
Q ss_pred CcHHHHHHHHHHHcc---CCccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYT---GRQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~---~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|||||+|+|+||.|| ||++||+|+++|||+|.+++++++.. ++.. .++.+.+.++|+|+
T Consensus 144 sEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d---------------- 207 (442)
T TIGR03372 144 TESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGD---------------- 207 (442)
T ss_pred hHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCC----------------
Confidence 799999999999996 89999999999999999999987642 2111 11223334445443
Q ss_pred HHHHHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 76 YAQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 76 ~~~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+.+++.++ .+++++||||+||+||++|+++||++||++++++|++||++||+|||||||||+|+ +|+++++|+.
T Consensus 208 -~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~ 285 (442)
T TIGR03372 208 -IEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGK-MFACEHEGVQ 285 (442)
T ss_pred -HHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCcccc-chhhhhcCCC
Confidence 334444443 24456999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred CcEEEecccccCC-cceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMGNG-MPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
|||+|+||+++|| +|+|++++++++++.+.. +++++++|++|++.|++
T Consensus 286 PDivt~gK~lg~G~~Pigavv~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~ 365 (442)
T TIGR03372 286 PDILCLAKALGGGVMPIGATIATEAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQ 365 (442)
T ss_pred CCeeeehhhhcCCcccceEEEecHHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 699999999999887621 44788999999999987
Q ss_pred c-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|+|+++++. +......+++.|+++||++.+.++.++++||.||+++|++|+|+++++|++++
T Consensus 366 l~~~~~~~i~~vRG~Gl~~giel~-~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~~~~l~~~~ 442 (442)
T TIGR03372 366 LAAEYPDLIIEARGKGLLMAIEFR-DNEIGYAFAKELFQQNILVAGTLNNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred HHHhCCCceEEEecceEEEEEEeC-ChHHHHHHHHHHHHCCcEEeecCCCCCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 5 6889999996 33456789999999999998765567899999999999999999999998764
No 25
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.9e-54 Score=400.79 Aligned_cols=268 Identities=28% Similarity=0.488 Sum_probs=228.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcc--ccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF--MLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||.||||++||+|+++|||+|.+++++++... +.. ......+.++|+|+.+++++....++..+.++
T Consensus 113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 192 (445)
T PRK08593 113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL 192 (445)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence 699999999999999999999999999999999988875321 111 22233455678898888766555455667778
Q ss_pred HHHHHHHHhc--CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~~--~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.++++++.. .+++||||+||+||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+.||+
T Consensus 193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~-~~a~~~~gv~pDi 271 (445)
T PRK08593 193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGK-WSSISHFNITPDL 271 (445)
T ss_pred HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch-HHHHHhcCCCCCE
Confidence 8888888643 356999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||+++||+|+|++++++++++.+.. ++++++++++|++.|+++
T Consensus 272 ~t~gK~l~~G~p~gav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 351 (445)
T PRK08593 272 MSFGKSLAGGMPMSAIVGRKEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYN 351 (445)
T ss_pred eeecccccCCcccEEEEEcHHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987742 458889999999999875
Q ss_pred -------cCceeEEEEec-------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS-------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+|+++++.. +...+..+++.|+++||++.+. .++++||.||+++|++|||+++++|++++++
T Consensus 352 ~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 352 FVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV--AGNVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred cEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc--CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 78899999862 1234678999999999999753 3589999999999999999999999999998
Q ss_pred Hhhc
Q psy11784 268 LQMD 271 (284)
Q Consensus 268 ~~~~ 271 (284)
+...
T Consensus 430 ~~~~ 433 (445)
T PRK08593 430 LEAG 433 (445)
T ss_pred Hhcc
Confidence 8653
No 26
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-53 Score=400.31 Aligned_cols=265 Identities=25% Similarity=0.381 Sum_probs=223.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|+|+||+||||.+||+|+++|||+|.+++++++..... . ......+.++|.|+.++.+++++ +.....+++
T Consensus 140 seAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 218 (459)
T PRK06082 140 TSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDA-DGSDVHYAD 218 (459)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCCh-hHHHHHHHH
Confidence 69999999999999999999999999999999988877543221 1 22334455678888888776543 344566788
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
.++++++. .+++||||+|||||+ |.++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+.|||+|+
T Consensus 219 ~l~~~i~~-~~~vAavIvEPv~g~-g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~-~fa~e~~gv~PDiv~~ 295 (459)
T PRK06082 219 YLEYVIEK-EGGIGAFIAEAVRNT-DVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGE-WFTHQAYGIEPDILCI 295 (459)
T ss_pred HHHHHHhc-CCCEEEEEECCccCC-CCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hhHhHhhCCCCCEEEe
Confidence 89998874 346999999999998 47789999999999999999999999999999999998 8999999999999999
Q ss_pred cccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-------
Q psy11784 159 GKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN------- 201 (284)
Q Consensus 159 sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~------- 201 (284)
||+++|| +|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 296 gKgl~gG~~P~~av~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~i 375 (459)
T PRK06082 296 GKGLGGGLVPIAAMITKDKYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLI 375 (459)
T ss_pred cccccCCCCcceEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 9999999 599999999998765321 458999999999999886
Q ss_pred -----cCceeEEEEecc-------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -----LHIFWCLILLSI-------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -----~G~~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|+|+++++..+ ...+..+...++++||++.+. .++++||.||+++|++|||++++++++++.++.
T Consensus 376 ~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~--~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~~~ 453 (459)
T PRK06082 376 GDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS--QGNVIQLSPPLIITREELTQALAILEEAIAKIC 453 (459)
T ss_pred eeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec--CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHHh
Confidence 899999999621 123567888999999999874 368999999999999999999999999999875
Q ss_pred hc
Q psy11784 270 MD 271 (284)
Q Consensus 270 ~~ 271 (284)
++
T Consensus 454 ~~ 455 (459)
T PRK06082 454 QD 455 (459)
T ss_pred hh
Confidence 43
No 27
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-53 Score=400.95 Aligned_cols=251 Identities=25% Similarity=0.462 Sum_probs=210.9
Q ss_pred CcHHHHHHHHHHHccC---CccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTG---RQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~---r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|||||+|+|+||.||+ |.+||+|+++|||+|.+++++++..... + .+..+.+.++| +++
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~--------~~d-------- 214 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVP--------FGN-------- 214 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccC--------CCC--------
Confidence 7999999999999994 7899999999999999999887543211 1 11111122223 332
Q ss_pred HHHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 76 YAQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 76 ~~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+++++.++. .++++||||+||+||++|+++||++||++++++|++||++||+|||||||||+|+ +|+++++|+.
T Consensus 215 -~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~-~~a~e~~gv~ 292 (459)
T PRK11522 215 -IEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGK-MFACEHENVQ 292 (459)
T ss_pred -HHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccch-hhhhhccCCC
Confidence 4556666652 3456999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred CcEEEecccccCC-cceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMGNG-MPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
|||+|+||++||| +|+|++++++++++.+.. ++++++++++|+++|++
T Consensus 293 PDivt~gK~lggG~~Pigav~~~~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~~l~~~~~~~g~~l~~~L~~ 372 (459)
T PRK11522 293 PDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDYLLDGFRQ 372 (459)
T ss_pred CCEEEechhhhCCCccceeEEEcHHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 699999999999886621 45899999999999987
Q ss_pred c-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+ .|+|+++++. +...+..+++.|+++||++.+...+++++||.||+++|++|||+++++|++++++
T Consensus 373 l~~~~~~~i~~VrG~Gl~~giel~-~~~~~~~i~~~l~~~Gvl~~~~~~~~~~lr~~Ppl~~t~~~id~~l~~l~~~l~~ 451 (459)
T PRK11522 373 LAREYPDLVQEARGKGMLMAIEFV-DNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKALAA 451 (459)
T ss_pred HHHhCCCceeeEEeceeEEEEEec-CchHHHHHHHHHHHCCeEEEecCCCCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 5 5889999996 3345678999999999999876556789999999999999999999999999988
Q ss_pred Hhh
Q psy11784 268 LQM 270 (284)
Q Consensus 268 ~~~ 270 (284)
+.+
T Consensus 452 ~~~ 454 (459)
T PRK11522 452 MRV 454 (459)
T ss_pred HHH
Confidence 754
No 28
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=100.00 E-value=3.8e-53 Score=400.96 Aligned_cols=266 Identities=20% Similarity=0.349 Sum_probs=220.0
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCC-CchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSA-DDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 71 (284)
|||||+|||+||+|+ +|++||+|+++|||+|.+++++++..... . ......+.+.|.|+.+++.... +.++
T Consensus 161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 240 (504)
T PLN02760 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEE 240 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHH
Confidence 699999999999883 57899999999999999988877543211 1 2222334557778777654322 2233
Q ss_pred HHHHHHHHHHHHHHh-cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEA-HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~-~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+.+++++++.. .++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 241 ~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~-~~a~e~~g 319 (504)
T PLN02760 241 FSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT-MFGCDKYN 319 (504)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch-hhHHHhcC
Confidence 345567788888763 3456999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
++|||+|+||+++||+ |+|++++++++++.+. . ++++++++++
T Consensus 320 v~PDivtlgK~lggG~~PigAv~~~~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~~l~~~~~~~g~~ 399 (504)
T PLN02760 320 IKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPR 399 (504)
T ss_pred CCCcEEEecccccCCccccceEeecHHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999999999999995 9999999999998653 1 4589999999
Q ss_pred HHHHHHhc-----------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
|+++|+++ .|+|+++++..+ ...+..+++.|+++||++.+. ++.+||.||+++|++
T Consensus 400 l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~---g~~lrl~Ppl~it~e 476 (504)
T PLN02760 400 FQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVA---GDNIMMSPPLIITPE 476 (504)
T ss_pred HHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEec---CCEEEEECCCCCCHH
Confidence 99999876 789999999621 123567889999999999863 478999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy11784 253 NVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~~ 270 (284)
|||+++++|+++++++.+
T Consensus 477 eid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 477 EVDELISIYGKALKATEE 494 (504)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 29
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=6e-53 Score=396.79 Aligned_cols=266 Identities=23% Similarity=0.369 Sum_probs=221.3
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCC-CchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSA-DDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~ 71 (284)
|||||+|||+||.| ++|++||+|+++|||+|.+++++++... +.. ......+.++|+|+.+++.... ..+.
T Consensus 119 seAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 198 (460)
T PRK06105 119 SEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEA 198 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHH
Confidence 79999999999987 4689999999999999999988875332 211 2222334557888776653222 2234
Q ss_pred HHHHHHHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+++++++++... .+++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 199 ~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~-~f~~~~~~ 277 (460)
T PRK06105 199 FATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN-MFGCETFG 277 (460)
T ss_pred HHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch-hhhHHhcC
Confidence 4556678899988643 456999999999999999999999999999999999999999999999999998 88999999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
+.|||+|+||+++|| +|+|++++++++++.+. . ++++++++++
T Consensus 278 v~PDi~~~gK~lggG~~P~~av~~~~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~v~~~g~~ 357 (460)
T PRK06105 278 IKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEERDLVGNAAERGAR 357 (460)
T ss_pred CCCCeeeeecccccCcccceEEEEcHHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999 69999999999987653 0 4589999999
Q ss_pred HHHHHHhc-----------cCceeEEEEecc----------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSI----------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~----------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
|+++|+++ .|+|+++++.++ ...+..+.+.++++||++.+. ++++||.||+++|++
T Consensus 358 l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~~~~---g~~i~l~Ppl~it~~ 434 (460)
T PRK06105 358 LQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAM---GDTLAFCPPLIITAA 434 (460)
T ss_pred HHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEEEec---CCEEEEECCCccCHH
Confidence 99999886 899999999621 123467888999999999863 479999999999999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q psy11784 253 NVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~~ 270 (284)
|||+++++|+++++++..
T Consensus 435 eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 435 QVDEMVDRFGRALDDVAA 452 (460)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999988753
No 30
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=7.2e-53 Score=396.06 Aligned_cols=268 Identities=25% Similarity=0.358 Sum_probs=224.0
Q ss_pred CcHHHHHHHHHHHc---c---CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCC-CCCCchH
Q psy11784 1 SEANDLALQLARAY---T---GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGE-FSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~---~---~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~ 71 (284)
|||||+|||+||.| + +|++||+|+++|||+|.+++++++...... ......+.++|.|+.++++ ++++.++
T Consensus 122 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 201 (460)
T PRK06541 122 SEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEA 201 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHH
Confidence 79999999999999 3 589999999999999999998875432211 2233445567888888776 5444445
Q ss_pred HHHHHHHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+++.++++++.. ++++|+||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 202 ~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~-~~a~~~~g 280 (460)
T PRK06541 202 FGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE-MFGCERFG 280 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch-hhhhhhcC
Confidence 5667788999998753 456999999999999999999999999999999999999999999999999998 78999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~ 196 (284)
+.||++|+||+++||+ |+|++++++++++.+.. ++++++++++|++
T Consensus 281 v~PDivt~gK~l~~G~~pigav~~~~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~~~~~~~~~~g~~l~~ 360 (460)
T PRK06541 281 YVPDIITCAKGITSGYSPLGAMIASDRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFEREGLLDHVRDNEPAFRA 360 (460)
T ss_pred CCCCEEEecccccCCccceeEEEEcHHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 9999999999999997 99999999999876521 3488899999999
Q ss_pred HHHhc-----------cCceeEEEEeccc--------H-----HHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 197 PLGIN-----------LHIFWCLILLSIT--------Y-----YLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 197 ~L~~~-----------~G~~~~i~~~~~~--------~-----~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
+|+++ .|+|+++++..+. . ....+++.|+++||++.+.+.+.++|||.||+++|++
T Consensus 361 ~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~g~~~lrl~Ppl~~t~~ 440 (460)
T PRK06541 361 TLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADDRGDPVVQLAPPLISGQE 440 (460)
T ss_pred HHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecCCCCCEEEEECCCCCCHH
Confidence 99875 7899999985211 0 1135778999999999875444589999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy11784 253 NVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~ 269 (284)
|||+++++|+++++++.
T Consensus 441 ~id~~~~~l~~~l~~~~ 457 (460)
T PRK06541 441 EFDEIEQILRSVLTEAW 457 (460)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998753
No 31
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=6e-53 Score=395.00 Aligned_cols=264 Identities=25% Similarity=0.373 Sum_probs=219.4
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCC-CcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPD-TYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 71 (284)
|||||+|+|+||.|+ +|.+||+|++||||+|.+++++++...... ......+.++|+++ .++.++....++
T Consensus 116 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 195 (442)
T PRK13360 116 SESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPE 195 (442)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHH
Confidence 799999999999995 588999999999999999998876432221 22223344567664 355555444445
Q ss_pred HHHHHHHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++++++++.. .+++||||+||+||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 196 ~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~g 274 (442)
T PRK13360 196 HGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA-PFAAQYFG 274 (442)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chhhhhcC
Confidence 5666788999998754 356999999999999999999999999999999999999999999999999998 78999999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
+.|||+|+||+++|| +|+|++++++++++.+. . ++++++++++
T Consensus 275 v~PDivt~gK~l~gG~~P~gav~~~~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~~l~~~~~~~g~~ 354 (442)
T PRK13360 275 VTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPY 354 (442)
T ss_pred CCCceeeeeeccccCccceEEEEEcHHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999 79999999999987542 1 4588899999
Q ss_pred HHHHHHhc-----------cCceeEEEEecc----cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSI----TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
+++.|+++ .|+++++++.+. ...+..+++.|+++||++.+. ++++||+||+++|++|||+++
T Consensus 355 l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l~~~Gvl~~~~---~~~lr~~Ppl~~t~~eid~~~ 431 (442)
T PRK13360 355 WEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKCFEKGLMIRYT---GDILALSPPLIIEEAQIDELF 431 (442)
T ss_pred HHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHHHHCCcEEEec---CCEEEEeCCCccCHHHHHHHH
Confidence 99999865 578889998631 234567888999999999853 478999999999999999999
Q ss_pred HHHHHHHHHH
Q psy11784 259 STLNRIFTSL 268 (284)
Q Consensus 259 ~~l~~~l~~~ 268 (284)
++|+++++++
T Consensus 432 ~~l~~~l~~~ 441 (442)
T PRK13360 432 DILAQALKET 441 (442)
T ss_pred HHHHHHHHHh
Confidence 9999999764
No 32
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=1.7e-52 Score=392.17 Aligned_cols=264 Identities=25% Similarity=0.369 Sum_probs=219.8
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCC-CcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPD-TYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~ 71 (284)
|||||+|+|+||.|+ +|.+||+|++||||+|.+++++++...... ......+.++|+|+ .+++++....++
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE 198 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence 799999999999996 578999999999999999998875432211 22223344567665 555545444445
Q ss_pred HHHHHHHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+.++++++++..+ +++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 199 ~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~~~~~~g 277 (445)
T PRK09221 199 HGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA-AFAAERFG 277 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch-hhHHHhcC
Confidence 55667788999888554 56999999999999999999999999999999999999999999999999998 88999999
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhch----------h--------------------------hhhHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLN----------C--------------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~----------~--------------------------l~~~~~~~~~ 193 (284)
+.||++|+||+++|| +|+|++++++++++.+. . ++++++++++
T Consensus 278 v~PDi~~~gK~l~gG~~Pi~av~~~~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 357 (445)
T PRK09221 278 VTPDIITFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPY 357 (445)
T ss_pred CCCCEEEeccccccCcccceeeEEcHHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 999999999999999 69999999999988642 0 4588899999
Q ss_pred HHHHHHhc-----------cCceeEEEEecc----cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 194 LVRPLGIN-----------LHIFWCLILLSI----TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 194 l~~~L~~~-----------~G~~~~i~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
|++.|+++ .|+|.++++.+. ...+..+++.|+++||++.+. ++++||+||+++|++|||+++
T Consensus 358 l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---~~~lr~~Ppl~~t~~eid~~~ 434 (445)
T PRK09221 358 FEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCFEKGLLVRYT---GDTIALSPPLIIEKAQIDELV 434 (445)
T ss_pred HHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHHHCCeEEeec---CCEEEEECCccCCHHHHHHHH
Confidence 99999875 688999998631 123567889999999999753 579999999999999999999
Q ss_pred HHHHHHHHHH
Q psy11784 259 STLNRIFTSL 268 (284)
Q Consensus 259 ~~l~~~l~~~ 268 (284)
++|+++++++
T Consensus 435 ~~l~~~l~~~ 444 (445)
T PRK09221 435 DALGDALRAV 444 (445)
T ss_pred HHHHHHHHhh
Confidence 9999999765
No 33
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.1e-52 Score=391.96 Aligned_cols=266 Identities=21% Similarity=0.303 Sum_probs=217.6
Q ss_pred CcHHHHHHHHHHHcc---C---CccEEEEcCCCcccchhhhcCCCCcccc-cCCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYT---G---RQNIVVVDAAYHGTVNLLLDISPRAFML-SSEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~---~---r~~il~~~~~yHG~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
|||||+|||+||+|+ | |.+|++|.+||||+|.+++++++..... ..+....+.++|.|+.++.+++....+..
T Consensus 125 seA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 204 (460)
T PRK12403 125 SEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFG 204 (460)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 699999999999983 4 5678999999999999999887644222 12233345567888877655433333445
Q ss_pred HHHHHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 74 QKYAQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 74 ~~~~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
+.+++++++.+. ...+++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|++
T Consensus 205 ~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~-~~a~e~~gv~ 283 (460)
T PRK12403 205 RRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE-WFAHEHFGFE 283 (460)
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhhhhhcCCC
Confidence 556777877665 33456999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred CcEEEecccccCCc-ceeEEEecHHHHHhchh---------------------------------hhhHH-HHHHHHHHH
Q psy11784 153 PDIITVGKPMGNGM-PIGAVITSRKIAESLNC---------------------------------LDDNR-PSGKYLVRP 197 (284)
Q Consensus 153 pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~---------------------------------l~~~~-~~~~~l~~~ 197 (284)
|||+|+||+++||+ |+|++++++++++.+.. +++++ +++++|++.
T Consensus 284 PDiv~~gK~lggG~~Piga~v~~~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~ 363 (460)
T PRK12403 284 PDTLSIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRC 363 (460)
T ss_pred CCeEEEcccccccccceEEEEECHHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 99999999999995 99999999999887621 45785 899999999
Q ss_pred HHhc------------cCceeEEEEecc-------c---HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 198 LGIN------------LHIFWCLILLSI-------T---YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 198 L~~~------------~G~~~~i~~~~~-------~---~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
|+++ .|+|++++++.+ . .....+.+.++++|+++.+. ++.+||.||+++|++|+|
T Consensus 364 L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---~~~~~l~Ppl~it~~eid 440 (460)
T PRK12403 364 LREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST---LGRMIMAPALVAGRAEID 440 (460)
T ss_pred HHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEec---CCEEEEECCCCCCHHHHH
Confidence 9865 899999999621 1 12345667789999999853 367999999999999999
Q ss_pred HHHHHHHHHHHHHhh
Q psy11784 256 FIVSTLNRIFTSLQM 270 (284)
Q Consensus 256 ~~~~~l~~~l~~~~~ 270 (284)
+++++|+++++++.+
T Consensus 441 ~~~~~l~~al~~~~~ 455 (460)
T PRK12403 441 ELVDKTRIAVDRTAR 455 (460)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998754
No 34
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2e-52 Score=423.08 Aligned_cols=265 Identities=40% Similarity=0.649 Sum_probs=223.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc---CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS---SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||+||||++||+|+++|||+|.++.+++....... ...+++++.++.|+.++++++.++ ...++.
T Consensus 651 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~--~~~~~~ 728 (972)
T PRK06149 651 SEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGAD--SAADYV 728 (972)
T ss_pred hHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcc--cHHHHH
Confidence 799999999999999999999999999999999877754321111 233456677788888887775332 123344
Q ss_pred HHHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 78 QAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 78 ~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
+++++.++ ..++++||||+|||||++|++++|++||++|+++|++||+++|+|||||||||+|+.+|+++++|+.||
T Consensus 729 ~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PD 808 (972)
T PRK06149 729 RDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPD 808 (972)
T ss_pred HHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCC
Confidence 55555443 244569999999999999999999999999999999999999999999999999975679999999999
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|+|+||++|||+|+|++++++++++.+.. +++++++|++|+++|+++
T Consensus 809 ivt~gK~lg~G~Pl~av~~~~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~l~~~~~~~G~~l~~~L~~l~~~ 888 (972)
T PRK06149 809 IITMAKGMGNGHPLGAVITRREIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEKLQENARRVGDHLKARLEALADR 888 (972)
T ss_pred EEEecccccCCeeeEEEEEcHHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999987641 458999999999999886
Q ss_pred ---------cCceeEEEEec-------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLS-------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ---------~G~~~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|+|+++++.. ....+..+++.|+++||++.+.+...++|||.||+++|++|||+++++|++++
T Consensus 889 ~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~~~~vl~~~Ppl~it~~~id~~~~~l~~~l 968 (972)
T PRK06149 889 HPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGDHLNILKIKPPLCLDRESADFFVDMLDRVL 968 (972)
T ss_pred CCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCCCCCEEEEECCCcCCHHHHHHHHHHHHHHH
Confidence 89999999962 23456789999999999999877667999999999999999999999999998
Q ss_pred HH
Q psy11784 266 TS 267 (284)
Q Consensus 266 ~~ 267 (284)
++
T Consensus 969 ~~ 970 (972)
T PRK06149 969 TE 970 (972)
T ss_pred Hh
Confidence 75
No 35
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-52 Score=389.16 Aligned_cols=268 Identities=25% Similarity=0.397 Sum_probs=224.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCC--ccccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPR--AFMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||.||||++||+|+++|||+|.++++++.. .+... ....+.+.++|+|+.++.+...+.++....++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (433)
T PRK08117 113 AEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECL 192 (433)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHH
Confidence 6999999999999999999999999999999998877643 12211 22334456678888776654433333444567
Q ss_pred HHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++++++++ .++++||||+|||||++|+++++++||++|+++|++||++||+|||||||||+|+ +|+++++|+.||+
T Consensus 193 ~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~-~~~~~~~gv~pDi 271 (433)
T PRK08117 193 RDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGE-WFAAQTFGVVPDI 271 (433)
T ss_pred HHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcccc-chhHhhcCCCCCE
Confidence 888888874 3456999999999999999999999999999999999999999999999999998 7888899999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 272 ~t~sK~lg~G~pigav~~~~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 351 (433)
T PRK08117 272 MTIAKGIASGLPLSAVVASKELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHP 351 (433)
T ss_pred eehhhhccCCCcceeEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999987643 347888899999998875
Q ss_pred -------cCceeEEEEec-----ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -------LHIFWCLILLS-----ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -------~G~~~~i~~~~-----~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|+|+++++.+ +......+.+.|+++||++.+.+..++++||.||+++|+++|++++++|+++++++.
T Consensus 352 ~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~~~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~ 431 (433)
T PRK08117 352 VIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEALTEYE 431 (433)
T ss_pred ceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCCCCCEEEEeCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 67899999962 223467788999999999987655568999999999999999999999999998764
No 36
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.4e-52 Score=388.33 Aligned_cols=259 Identities=23% Similarity=0.354 Sum_probs=215.5
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
|||||+|||+||+| ++|++||+|++||||+|.+++++++.. ++.. ........++|+|+... . +.
T Consensus 114 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~---~~ 187 (429)
T PRK06173 114 SVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKF---G---EE 187 (429)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCccc---c---hh
Confidence 79999999999998 478999999999999999998886532 1111 11222334566665421 1 23
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....+++.+++.++.+++++||||+||+ ||+||+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 188 ~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~g 266 (429)
T PRK06173 188 WNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGK-LFALEHAG 266 (429)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCc-chHHHhcC
Confidence 3445678888988766667999999997 999999999999999999999999999999999999999998 88999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch--------h--------------------------hhhHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN--------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~--------~--------------------------l~~~~~~~~~l~ 195 (284)
+.|||+|+||+++||+ |++++++++++++.+. . ++++++++++|+
T Consensus 267 v~PDiv~~gK~l~gG~~p~~a~~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~ 346 (429)
T PRK06173 267 VVPDIMCIGKALTGGYLTLSATITTEAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLK 346 (429)
T ss_pred CCCCEEEeehhhhCCccccceEEecHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999995 9999999999988652 1 458889999999
Q ss_pred HHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+.|+++ .|+|+++++. +...+..+++.|+++||++.+. +++|||.||+++|++|+|+++++|+++
T Consensus 347 ~~L~~~~~~~~v~~vRg~Gl~~~iel~-~~~~~~~i~~~l~e~Gi~v~~~---g~~l~~~Ppl~it~~ei~~~~~~l~~~ 422 (429)
T PRK06173 347 QELAPAAEFDSVAEVRVLGAIGVVEMK-EPVNMATLQPRFVEHGIWVRPF---GKLVYIMPPFIISPDELSQLTSGLLRV 422 (429)
T ss_pred HHHHHhhcCCCeeeeeccceEEEEEeC-CcccHHHHHHHHHHCCeEEEec---CCEEEEeCCccCCHHHHHHHHHHHHHH
Confidence 999854 5899999995 3334678899999999999864 479999999999999999999999999
Q ss_pred HHHHhh
Q psy11784 265 FTSLQM 270 (284)
Q Consensus 265 l~~~~~ 270 (284)
++++.+
T Consensus 423 l~~~~~ 428 (429)
T PRK06173 423 LKQEYN 428 (429)
T ss_pred HHHHhc
Confidence 987643
No 37
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=100.00 E-value=2.1e-52 Score=388.85 Aligned_cols=254 Identities=22% Similarity=0.321 Sum_probs=211.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|+|+||+||||++||+|++||||+|.+++++++... +.. ......+.++|+|+.... ...+++
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~---------~~~~~~ 179 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGG---------DVDTIA 179 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCcccc---------chhHHH
Confidence 799999999999999999999999999999999998875432 211 112233445666643211 012367
Q ss_pred HHHHHHHhcC---CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~~~~---~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++++++++. +++||||+||+||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++++.||+
T Consensus 180 ~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~-~~a~~~~~v~PDi 258 (412)
T TIGR02407 180 YFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT-FFSFEPAGIEPDI 258 (412)
T ss_pred HHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hHHhcccCCCCCE
Confidence 7888887543 35899999999999999999999999999999999999999999999999998 8899999999999
Q ss_pred EEecccccC-CcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 156 ITVGKPMGN-GMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 v~~sK~l~~-G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++||++++ |+|+|++++++++ +.+.. .+++++++++++++|+++
T Consensus 259 ~~~~K~lg~~G~pigav~~~~~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~~~ 337 (412)
T TIGR02407 259 VCLSKSISGYGLPLALTLIKPEL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIVAE 337 (412)
T ss_pred EEechhccCCccceeEEEEchhh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999 8999999999886 44321 347888899999988763
Q ss_pred ----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++. +......+.+.|+++||++.+.++++++|||.||+++|++|+|+++++|+++++
T Consensus 338 ~~~~~~~vrg~Gl~~~l~l~-~~~~~~~~~~~~~~~Gv~v~~~~~~~~~lr~~p~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 338 YPELIKQVRGRGLMQGIECG-DGDLAGKIAKAAFENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred CCCceEeeecceeEEEEEec-ChHHHHHHHHHHHHCCCEEeccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHh
Confidence 6889999994 445577899999999999987766678999999999999999999999999885
No 38
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-52 Score=387.00 Aligned_cols=261 Identities=22% Similarity=0.364 Sum_probs=218.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||.||||++||+|+++|||+|.+++++++.. +... ......+.++|+|+.+++. + .+.++
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~----~~~~~ 183 (425)
T PRK07495 111 AEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGV---S----VEQSL 183 (425)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccc---c----HHHHH
Confidence 69999999999999999999999999999999988876531 2211 2222334567777654432 1 12346
Q ss_pred HHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.++++++. .++++||||+||+|+++|++++|++|+++|+++|++||++||+|||||||||+|+ +|+++++|+.|||
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~a~~~~gv~pDi 262 (425)
T PRK07495 184 AALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGK-LFAMEHHEVAADL 262 (425)
T ss_pred HHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCC-ceeecccCCCCCE
Confidence 777888763 3456999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||++++|+|+|++++++++++.+.. .+++++++++|+++|+++
T Consensus 263 ~tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 342 (425)
T PRK07495 263 TTMAKGLAGGFPLAAVTGRAEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEEDLCERANQLGNRLKQRLASLRETVP 342 (425)
T ss_pred EeehhhhcCCccceEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999987643 347889999999999876
Q ss_pred -------cCceeEEEEecc------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -------~G~~~~i~~~~~------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+|+++++.+. ...+..+.+.++++|+++.+.+..++++||.||+++|++|+|+++++|+++++++
T Consensus 343 ~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g~~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 343 EIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTCGVHGNVIRFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred CeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeecCCCCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 789999999621 2346678899999999998766667999999999999999999999999999876
Q ss_pred h
Q psy11784 269 Q 269 (284)
Q Consensus 269 ~ 269 (284)
.
T Consensus 423 ~ 423 (425)
T PRK07495 423 S 423 (425)
T ss_pred h
Confidence 4
No 39
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=3.3e-52 Score=389.05 Aligned_cols=259 Identities=22% Similarity=0.338 Sum_probs=215.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++... +.. ......+.++|+|+.++.. ..+++
T Consensus 113 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~---------~~~~~ 183 (425)
T PRK09264 113 TNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGD---------VDTLA 183 (425)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccc---------hhHHH
Confidence 699999999999999999999999999999999998875432 211 1222345567777543211 11267
Q ss_pred HHHHHHHhcC---CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 79 AARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 79 ~l~~~i~~~~---~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+++++++++. +++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++++.||+
T Consensus 184 ~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~-~~~~~~~~v~PDi 262 (425)
T PRK09264 184 YLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGT-FFSFERAGITPDI 262 (425)
T ss_pred HHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccH-HHHHhhcCCCCCE
Confidence 8888887432 35999999999999999999999999999999999999999999999999997 8899999999999
Q ss_pred EEecccccC-CcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 156 ITVGKPMGN-GMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 v~~sK~l~~-G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+|+||++++ |+|+|++++++++. .+.. ++++++++++|+++|+++
T Consensus 263 ~t~~K~l~~~G~pigav~~~~~i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~~l~~~~~~~g~~l~~~l~~l~~~ 341 (425)
T PRK09264 263 VTLSKSISGYGLPMALVLIKPELD-VWKPGEHNGTFRGNNLAFVTATAALEEYWSDDAFEKEVKAKGELVRERLEEIAAK 341 (425)
T ss_pred EEeccccCCCccceEEEEEchhhh-ccCCCccCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999998 89999999998874 3321 347888899998888663
Q ss_pred ----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 202 ----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 202 ----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
.|+++++++. +......+++.|+++||++.+.+.+.++|||.||+++|+++|++++++|+++++++.++
T Consensus 342 ~~~~~~~vrg~Gl~~~i~l~-~~~~~~~l~~~~~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ei~~~~~~l~~~l~~~~~~ 420 (425)
T PRK09264 342 YPGLGAEVRGRGMMQGIDFG-DGELAGKIAAEAFENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVAEVLAE 420 (425)
T ss_pred CCCceecceecccEEEEEec-ChHHHHHHHHHHHHCCCEEeccCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 5788899884 44567789999999999998876667899999999999999999999999999887544
No 40
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9e-52 Score=387.15 Aligned_cols=265 Identities=25% Similarity=0.415 Sum_probs=222.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--ccc-cCCCCCceEEccCCCCcCCCCC-CCchHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FML-SSEKKPWVHVIPFPDTYRGEFS-ADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 76 (284)
|||||+|||+||+||||++|++|++||||+|.+++++++.. .+. .......+.++|+|+.++.+++ .+.++..+.+
T Consensus 125 sEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (441)
T PRK05769 125 TESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAV 204 (441)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHH
Confidence 79999999999999999999999999999999998876432 111 1223345666888888888776 3334445566
Q ss_pred HHHHHH-HHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 77 AQAARN-IMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~-~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
++.+++ +++. .++++||||+||+||++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++|+.|
T Consensus 205 ~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~-~~a~~~~gv~p 283 (441)
T PRK05769 205 LDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGK-MFAIEHFGVEP 283 (441)
T ss_pred HHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-eehhhccCCCC
Confidence 788888 4443 3456999999999999999999999999999999999999999999999999998 78999999999
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
|++|+||++++|+|+|++++++++++.+.. ++++++++++|++.|+++
T Consensus 284 Divt~~K~l~~G~p~gav~~~~~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~~~~~~~~~~g~~l~~~L~~l~~~~~ 363 (441)
T PRK05769 284 DIITLAKAIAGGLPLGAVIGRAELMFLPPGSHANTFGGNPVAAAAALATLEELEEGLLENAQKLGEYLRKELKELKEKYE 363 (441)
T ss_pred CEEEEcccccCCcccEEEEEehhhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999999999999999999865432 247888999999999876
Q ss_pred -------cCceeEEEEecc-----cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI-----TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -------~G~~~~i~~~~~-----~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+|+++++..+ ......+.+.|+++||++.+.+ .+++||+||+++|++|||+++++|+++++++
T Consensus 364 ~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 364 FIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLGAG--KSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred CeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 688999999622 2356778899999999997643 4899999999999999999999999998764
No 41
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.3e-51 Score=383.12 Aligned_cols=264 Identities=28% Similarity=0.473 Sum_probs=220.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||.||||++||+|++||||+|.+++++++.. +... ..+++...++|+|+.++.+.... +.....++
T Consensus 104 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 182 (420)
T TIGR00700 104 AEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDK-QLSTDGEL 182 (420)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCcccccccccc-chhHHHHH
Confidence 79999999999999999999999999999999999877532 2221 22334455678887776543321 12233457
Q ss_pred HHHHHHHH--hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIME--AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~--~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.+++++. ..++++||||+|||||++|..+++++|+++|+++|++||++||+|||||||||+|+ +|+++++++.||+
T Consensus 183 ~~~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~-~~a~~~~~~~pDi 261 (420)
T TIGR00700 183 AAARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGA-MFACEHEGPEPDL 261 (420)
T ss_pred HHHHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccch-hHHHhhcCCCCCE
Confidence 78888774 34567999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+++||++++|+|+|++++++++++.+.. .++++++++++++.|+++
T Consensus 262 ~~lsK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~ 341 (420)
T TIGR00700 262 ITTAKSLADGLPLSGVTGRAEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDP 341 (420)
T ss_pred EEeeccccCCcceEEEEecHHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999987742 347888889999888775
Q ss_pred -------cCceeEEEEec------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 -------~G~~~~i~~~~------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++.. +......+.+.|+++||++.|++.+++++||.||+++|+++|++++++|+++++
T Consensus 342 ~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f~~~lRl~p~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 342 RIGDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMFGNIIRFLPPLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CEEEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCCCCEEEEECCCCcCHHHHHHHHHHHHHHhh
Confidence 78899998841 224567788889999999998776779999999999999999999999998874
No 42
>KOG1402|consensus
Probab=100.00 E-value=3.9e-52 Score=358.17 Aligned_cols=244 Identities=23% Similarity=0.408 Sum_probs=209.8
Q ss_pred CcHHHHHHHHHHHcc--------CCccEEEEcCCCcccchhhhcCCCCc--ccccCCC-CCceEEccCCCCcCCCCCCCc
Q psy11784 1 SEANDLALQLARAYT--------GRQNIVVVDAAYHGTVNLLLDISPRA--FMLSSEK-KPWVHVIPFPDTYRGEFSADD 69 (284)
Q Consensus 1 seA~e~AlklAr~~~--------~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 69 (284)
.||+|.|+||||.|. .+.+|++-.++|||+|.++.+++... +....++ ++.+..+| |++
T Consensus 126 aEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~--------Y~d-- 195 (427)
T KOG1402|consen 126 AEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVP--------YGD-- 195 (427)
T ss_pred hhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeec--------cCC--
Confidence 489999999999762 46789999999999999999887543 2211222 22233333 343
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc
Q psy11784 70 PQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ 149 (284)
Q Consensus 70 ~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~ 149 (284)
+++|+..++ .+.+|++|+|||||++|+++||++||+++++||++|++++|.||||||+||||+ +|++++.
T Consensus 196 -------~eale~~l~--~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk-~la~d~e 265 (427)
T KOG1402|consen 196 -------AEALEVALK--SPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGK-LLACDYE 265 (427)
T ss_pred -------HHHHHHHhc--CCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCc-EEEeehh
Confidence 788999887 366999999999999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHH
Q psy11784 150 GAVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 150 g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~ 199 (284)
++.||++.|+|+++|| +|++++++++++|..+.. .++.+.+|..|+.+|+
T Consensus 266 nv~PDivilgKalSGG~~Pvsavl~~~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~ 345 (427)
T KOG1402|consen 266 NVRPDIVILGKALSGGVYPVSAVLADDDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLN 345 (427)
T ss_pred hcCCCeEEEeccccCCeeeeEEEEecHHHHhccCCCccccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999 699999999999988765 4588899999999999
Q ss_pred hc-------------cCceeEEEEecc---cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 200 IN-------------LHIFWCLILLSI---TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 200 ~~-------------~G~~~~i~~~~~---~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
++ +|++.++++.+. ...+..+|-.|.++|++..| ..++.|||.||++++++|+++.++++.+
T Consensus 346 ~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp--tH~~IiRfaPPL~I~e~dl~eg~e~i~k 423 (427)
T KOG1402|consen 346 KLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP--THGNIIRFAPPLVISEEDLREGIEAIEK 423 (427)
T ss_pred hccccccchhheeeccceEEEEEeccccccchhHHHHHHcccccccccCC--CCCCeEEecCCcccCHHHHHHHHHHHHH
Confidence 88 899999999743 25678899999999999997 4578999999999999999999999988
Q ss_pred HHH
Q psy11784 264 IFT 266 (284)
Q Consensus 264 ~l~ 266 (284)
++.
T Consensus 424 ~i~ 426 (427)
T KOG1402|consen 424 TIA 426 (427)
T ss_pred Hhc
Confidence 764
No 43
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=7.4e-52 Score=385.71 Aligned_cols=256 Identities=23% Similarity=0.359 Sum_probs=212.3
Q ss_pred CcHHHHHHHHHHHc-----cCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY-----TGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~-----~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||+| ++|++||+|++||||+|.+++++++.. .+.. .+......++|.|+.+.. ++.
T Consensus 113 sEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~ 186 (428)
T PRK07986 113 SVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFD------GEW 186 (428)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccc------hhh
Confidence 79999999999998 689999999999999999999886532 1111 222233334566643211 112
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++++++.++..+++++|||+||+ ||.+|+++++++||++|+++|++||++||+|||||||||+|+ +|+++++|+
T Consensus 187 ~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~-~fa~~~~gv 265 (428)
T PRK07986 187 DERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGK-LFACEHAGI 265 (428)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCC-eeeecccCC
Confidence 233477888888766667999999996 999999999999999999999999999999999999999998 889999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhch--------h--------------------------hhhHHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLN--------C--------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~--------~--------------------------l~~~~~~~~~l~~ 196 (284)
.|||+|+||+++|| +|+|++++++++++.+. . ++++++++++|++
T Consensus 266 ~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 266 APDILCLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLRE 345 (428)
T ss_pred CCCEEEechhhhCCcccCcchhchHHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 99999999999999 59999999999988652 1 4588899999999
Q ss_pred HHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 197 PLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 197 ~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|+++ .|+|+++++. +...+..+.+.|+++||++.+. +++|||.||+++|++||++++++|++++
T Consensus 346 ~l~~l~~~~~i~~vRg~Gl~~~ve~~-~~~~~~~~~~~l~~~Gl~~~~~---g~~i~~~Ppl~it~~ei~~~~~~l~~~l 421 (428)
T PRK07986 346 ELAPLRDAPMVADVRVLGAIGVVETT-RPVNMAALQRFFVEQGVWIRPF---GKLIYLMPPYIILPEQLQRLTAAVNRAV 421 (428)
T ss_pred HHHHHhcCCCEEeEeccceEEEEEeC-CcccHHHHHHHHHHCCcEEEec---CCEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 99875 5999999995 2234668899999999999864 4799999999999999999999999998
Q ss_pred HH
Q psy11784 266 TS 267 (284)
Q Consensus 266 ~~ 267 (284)
++
T Consensus 422 ~~ 423 (428)
T PRK07986 422 QD 423 (428)
T ss_pred hh
Confidence 54
No 44
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.3e-51 Score=381.73 Aligned_cols=258 Identities=25% Similarity=0.420 Sum_probs=216.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||+||||++||+|+++|||+|.+++++++.. ++.. ..+++.+.++|+|+..++.. ...++
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-------~~~~~ 183 (421)
T PRK06777 111 AEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVS-------VEEAL 183 (421)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcC-------HHHHH
Confidence 79999999999999999999999999999999999887532 2221 22333445567676443211 12346
Q ss_pred HHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.++++++. .++++||||+||+||++|+.++|++||++|+++|++||++||+|||||||||+|+ +|+++++++.||+
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~-~~~~~~~~~~pDi 262 (421)
T PRK06777 184 SSVERLFKADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGK-LFAMEYYDVKPDL 262 (421)
T ss_pred HHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCc-hhhhhhcCCCCCE
Confidence 778888863 3466999999999999999999999999999999999999999999999999997 7899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||++++|+|+|++++++++++.+.. ++++++++++++++|+++
T Consensus 263 v~~sK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 342 (421)
T PRK06777 263 ITMAKSLGGGMPISAVVGRAEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKASCP 342 (421)
T ss_pred EeeehhhcCCCceEEEEEcHHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987753 458889999999999875
Q ss_pred -------cCceeEEEEecc------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 -------~G~~~~i~~~~~------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++... .+....+.+.++++||++.+++.+++++||.||+++|++++++++++|++++.
T Consensus 343 ~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~~g~~lr~~ppl~i~~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 343 AIVDIRARGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGVHGNVIRFLYPLTIPDAQFSKALNILTRLLA 420 (421)
T ss_pred CeEEecCceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 789999888521 23456778888999999998877778999999999999999999999998874
No 45
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=5.1e-51 Score=383.70 Aligned_cols=270 Identities=25% Similarity=0.400 Sum_probs=223.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++.. .+.. ....+.+.++|+|+.++.+.....+.....++
T Consensus 125 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (451)
T PRK06918 125 AEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMI 204 (451)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHH
Confidence 69999999999999999999999999999999999876532 2211 22334455678887776554332233444556
Q ss_pred HHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.+++.+.. .++++||||+||+||++|.++++++|+++|+++|++||++||+|||||||||+|+ +++++++++.||+
T Consensus 205 ~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~-~~a~~~~~v~pDi 283 (451)
T PRK06918 205 EEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGK-YFAIEHFDVVPDL 283 (451)
T ss_pred HHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCc-eehhHhcCCCCCE
Confidence 677776642 3456999999999999999999999999999999999999999999999999997 7888999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+++||++++|+|+|++++++++++.+.. .+++++++++++++|+++
T Consensus 284 ~t~sK~l~~G~pig~v~~~~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~l~~~~~ 363 (451)
T PRK06918 284 ITVSKSLGAGVPISGVIGRKEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYN 363 (451)
T ss_pred EeeehhhcCCCccEEEEEcHHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9999999999999999999999987643 347888899999888765
Q ss_pred -------cCceeEEEEe-------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILL-------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~-------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+|+++++. ++......+.+.|+++||++.+++.+++++||.||+++|+++||+++++|++++++
T Consensus 364 ~~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 364 CIGDVRGLGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred CceeeccceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCCCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 6788888884 12345678888999999999987666799999999999999999999999999988
Q ss_pred Hhhc
Q psy11784 268 LQMD 271 (284)
Q Consensus 268 ~~~~ 271 (284)
+.++
T Consensus 444 ~~~~ 447 (451)
T PRK06918 444 CYEK 447 (451)
T ss_pred HHHh
Confidence 7543
No 46
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.2e-51 Score=381.26 Aligned_cols=254 Identities=20% Similarity=0.309 Sum_probs=208.8
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
|||||+|||+||+|+ +|.+||+|++||||+|.+++++++.. .+.. .+......++|.|..... ..+
T Consensus 110 seA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~ 184 (422)
T PRK05630 110 SVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGS-----SPQ 184 (422)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCC-----ChH
Confidence 799999999999995 68899999999999999999887532 1111 112223344566642111 112
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
..+.+++.+++++. +++||||+||+ ||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|
T Consensus 185 ~~~~~~~~~~~~~~---~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~-~~a~~~~g 260 (422)
T PRK05630 185 EISEYLRSLELLID---ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGE-LFATLAAG 260 (422)
T ss_pred HHHHHHHHHHHHHh---hceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCch-hhHHHhcC
Confidence 23456777887775 57999999996 999999999999999999999999999999999999999998 89999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhch----------h-------------------------hhhHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLN----------C-------------------------LDDNRPSGKYL 194 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~----------~-------------------------l~~~~~~~~~l 194 (284)
+.|||+|+||+++||+ |+|++++++++++.+. . ++++++++++|
T Consensus 261 v~PDi~t~gK~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~~~~~~~~~g~~l 340 (422)
T PRK05630 261 VTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGMWRKQVKRIEAEL 340 (422)
T ss_pred CCCCeeeeechhhcCccccceeeccHHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 9999999999999995 9999999999987652 0 35888999999
Q ss_pred HHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 195 VRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 195 ~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
++.|+.+ .|+|+++++. +...+..+.+.|+++||++.+. ++++||.||+++|++|||+++++|++
T Consensus 341 ~~~L~~l~~~~~v~~vRg~Gl~~~ie~~-~~~~~~~~~~~~~~~Gl~~~~~---g~~l~~~PpL~it~~~i~~~~~~l~~ 416 (422)
T PRK05630 341 IAGLSPLAHLPGVADVRVLGAIGVVEME-QPVDMEEATQAAVDHGVWLRPF---GRLVYVMPPYITTSEQIAQICAALAA 416 (422)
T ss_pred HHHHHHhhcCCCeeeeeccccEEEEEEC-CcccHHHHHHHHHHCCeEEEec---CCEEEEECCccCCHHHHHHHHHHHHH
Confidence 9988764 5999999995 2223568889999999999864 48999999999999999999999999
Q ss_pred HHHH
Q psy11784 264 IFTS 267 (284)
Q Consensus 264 ~l~~ 267 (284)
++++
T Consensus 417 al~~ 420 (422)
T PRK05630 417 AVKA 420 (422)
T ss_pred HHhc
Confidence 9864
No 47
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3e-50 Score=376.85 Aligned_cols=267 Identities=28% Similarity=0.435 Sum_probs=224.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--ccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||||+|||+||+||||++|++|.++|||+|.+++++++.. .+...+....+.++|+|+.++.++.....+....+++
T Consensus 111 sEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (443)
T PRK08360 111 SDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVE 190 (443)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHH
Confidence 69999999999999999999999999999999988876532 1111111334566788888776664433344445677
Q ss_pred HHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 79 AARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 79 ~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.++++++. ..+++||||+||+|+.+|.++++++|+++|+++|++||++||+||||+||||+|+ +|+++++++.||++
T Consensus 191 ~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~-~~a~~~~~~~pDii 269 (443)
T PRK08360 191 YIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK-WFAIEHFGVEPDII 269 (443)
T ss_pred HHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-chhhhhcCCCCCEE
Confidence 78888864 2456999999999999999999999999999999999999999999999999998 78888899999999
Q ss_pred EecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|+||++++|+|+|++++++++++.+.. ++++++++++|++.|+++
T Consensus 270 tlsK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 349 (443)
T PRK08360 270 TLGKPLGGGLPISATIGRAEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHEL 349 (443)
T ss_pred EecccccCCceeEEEEEcHHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999987743 458889999999999875
Q ss_pred ------cCceeEEEEecc-------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI-------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ------~G~~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+|+++++..+ ...+..+++.|+++|+++.+. .++++||.||+++|++|||+++++|+++++++
T Consensus 350 v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~--~~~~lr~~P~l~~t~~~id~~~~~l~~~l~~~ 427 (443)
T PRK08360 350 IGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF--SGNVLRIQPPLTIEKEVLDEGLDILEEAIEDV 427 (443)
T ss_pred eeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec--CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 699999999622 134668899999999998753 36899999999999999999999999999988
Q ss_pred hh
Q psy11784 269 QM 270 (284)
Q Consensus 269 ~~ 270 (284)
.+
T Consensus 428 ~~ 429 (443)
T PRK08360 428 EE 429 (443)
T ss_pred Hh
Confidence 64
No 48
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=100.00 E-value=1.6e-50 Score=377.16 Aligned_cols=258 Identities=23% Similarity=0.386 Sum_probs=216.0
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||+|||+||+||||++||+|++||||+|.+++++++.. ++.. ...+..+.++|+|+.+++. ....++
T Consensus 111 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~-------~~~~~~ 183 (421)
T PRK09792 111 AEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGI-------STQDSL 183 (421)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccc-------cHHHHH
Confidence 79999999999999999999999999999999999886532 2221 2223334556777544321 112346
Q ss_pred HHHHHHHHh--cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEA--HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~--~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.++++++. ..+++||||+||+|+++|..++|++|+++|+++|++||++||+|||+|||||+|+ +|+++++++.||+
T Consensus 184 ~~l~~~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~-~~a~~~~~~~pDi 262 (421)
T PRK09792 184 DAIERLFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGK-LFAMDHYADKPDL 262 (421)
T ss_pred HHHHHHHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCc-hhHHHhcCCCCcE
Confidence 788888874 2456999999999999999999999999999999999999999999999999998 7899999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
+|+||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 263 ~t~gK~l~~G~pigav~~~~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~l~~l~~~~p 342 (421)
T PRK09792 263 MTMAKSLAGGMPLSGVVGNANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERANQLGQRLKNTLIDAKESVP 342 (421)
T ss_pred EEeehhhcCCCceEEEEEcHHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987643 457888899999988876
Q ss_pred -------cCceeEEEEecc------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSI------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 -------~G~~~~i~~~~~------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+|+++++.+. ......+++.|+++||++.+.+..++.|||.||+++|++||++++++|+++++
T Consensus 343 ~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g~~~~~irl~P~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 343 AIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCGAYGNVIRFLYPLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred CcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecCCCCCEEEEeCCCcCCHHHHHHHHHHHHHHHh
Confidence 689999999622 13567899999999999986555579999999999999999999999999874
No 49
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.1e-49 Score=368.32 Aligned_cols=254 Identities=24% Similarity=0.339 Sum_probs=211.4
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+||+| |+|++||+|+++|||+|.+++++++...... .+......++|+|+ + +.
T Consensus 112 seA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~------~----d~ 181 (423)
T PRK05964 112 SVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPP------D----GY 181 (423)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCc------c----hh
Confidence 79999999999999 7899999999999999999998875432211 11222233444442 1 12
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcc-eecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEP-VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Ep-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+++.+++.++.+++++||||+|| +|+++|++++|++||++|+++|++||++||+|||||||||+|+ +|+++++++
T Consensus 182 ~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~-~~a~~~~~v 260 (423)
T PRK05964 182 EQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGT-LFACEQAGV 260 (423)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc-hhHHHhcCC
Confidence 34457888888876667799999999 6999999999999999999999999999999999999999997 789999999
Q ss_pred CCcEEEecccccCC-cceeEEEecHHHHHhch---------h--------------------------hhhHHHHHHHHH
Q psy11784 152 VPDIITVGKPMGNG-MPIGAVITSRKIAESLN---------C--------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~---------~--------------------------l~~~~~~~~~l~ 195 (284)
.||++++||+++|| +|+|++++++++++.+. . ++++++++++++
T Consensus 261 ~pDi~~~~K~l~gG~~p~~av~~~~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~~~~~~~~~~g~~l~ 340 (423)
T PRK05964 261 SPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLA 340 (423)
T ss_pred CCCeeeeehhhhcCcccceEEEEcHHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999998 79999999999988652 0 458888999999
Q ss_pred HHHHhc-----------cCceeEEEEeccc--HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSIT--YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+.|+++ .|+|+++++.... .....+.+.|+++||++.+. ++.+||+||+++|++|||+++++|+
T Consensus 341 ~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~~Gv~v~~~---~~~lR~~p~l~~t~edId~~v~~l~ 417 (423)
T PRK05964 341 EGLEPFRDLPGVADVRVLGAIGAVELDRPVLERDGPALRAFALERGVLLRPL---GNTIYLMPPYIITAEELDRITDAIV 417 (423)
T ss_pred HHHHhhccCCCeEEeecccEEEEEEeccCcchhHHHHHHHHHHHCCeEEEec---CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 998775 5788899885322 24678999999999999864 4799999999999999999999999
Q ss_pred HHHHHH
Q psy11784 263 RIFTSL 268 (284)
Q Consensus 263 ~~l~~~ 268 (284)
++++++
T Consensus 418 ~al~~~ 423 (423)
T PRK05964 418 EVADEL 423 (423)
T ss_pred HHHhhC
Confidence 998763
No 50
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=5.4e-49 Score=368.43 Aligned_cols=258 Identities=25% Similarity=0.386 Sum_probs=203.0
Q ss_pred CcHHHHHHHHHHHcc-------C-----CccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCC
Q psy11784 1 SEANDLALQLARAYT-------G-----RQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFS 66 (284)
Q Consensus 1 seA~e~AlklAr~~~-------~-----r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~ 66 (284)
|||||+|||+||+|+ | |++||+|++||||+|++++++++... ... ....+.. .+|.|.. .+++.
T Consensus 120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 197 (443)
T PRK08297 120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWP-RIDNPKL-RFPLP 197 (443)
T ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCcc-ccCCCCC-CCCCc
Confidence 799999999999984 3 58899999999999999998875321 111 1111111 1333332 12221
Q ss_pred C-C---chHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc
Q psy11784 67 A-D---DPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH 142 (284)
Q Consensus 67 ~-~---~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~ 142 (284)
. + .......+++++++++..+++++||||+|||||++|+++||++||++|+++|++||++||+|||||||||+|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~- 276 (443)
T PRK08297 198 GEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGT- 276 (443)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccch-
Confidence 1 1 1223345578888888877778999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCcEEEecccccCCcceeEEEecHHHHH----hch----h--------------------------hhhHH
Q psy11784 143 FWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAE----SLN----C--------------------------LDDNR 188 (284)
Q Consensus 143 ~~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~----~~~----~--------------------------l~~~~ 188 (284)
+|+++++|+.|||+|+||+++ ++++++++++.+ .+. . +++++
T Consensus 277 ~~a~~~~gv~PDiv~~gK~l~----~~a~l~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 352 (443)
T PRK08297 277 AWAYQQLGVRPDIVAFGKKTQ----VCGIMAGRRVDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEEDGLVENAA 352 (443)
T ss_pred HHHHHhcCCCCCEEEeccccc----ccceecchHHHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 899999999999999999984 466666655432 121 0 45899
Q ss_pred HHHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 189 PSGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 189 ~~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
+++++|+++|+++ .|+|+++++. +......+++.|+++||++.+.+ .+.+||+||+++|++|||
T Consensus 353 ~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~~~i~~~-~~~~~~~~~~~l~~~Gvl~~~~~--~~~lr~~P~l~~t~~eid 429 (443)
T PRK08297 353 RQGEYLLARLEELAAEFPAVVSNVRGRGLMCAFDLP-TTADRDEVIRRLWEEGVLVLPCG--ERSIRFRPALTVTTEEID 429 (443)
T ss_pred HHHHHHHHHHHHHHHHCCCcceeeeccceEEEEEec-CHHHHHHHHHHHHHCCEEEecCC--CCeEEEECCccCCHHHHH
Confidence 9999999999875 6889999994 44456789999999999998743 478999999999999999
Q ss_pred HHHHHHHHHHHHH
Q psy11784 256 FIVSTLNRIFTSL 268 (284)
Q Consensus 256 ~~~~~l~~~l~~~ 268 (284)
+++++|+++++++
T Consensus 430 ~~l~~l~~~l~~~ 442 (443)
T PRK08297 430 AAIDALRRALPEV 442 (443)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999765
No 51
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=100.00 E-value=2.2e-49 Score=370.62 Aligned_cols=255 Identities=18% Similarity=0.279 Sum_probs=199.1
Q ss_pred CcHHHHHHHHHHHccC---------------------------CccEEEEcCCCcccchhhhcCCCCcc-cccCCCCCce
Q psy11784 1 SEANDLALQLARAYTG---------------------------RQNIVVVDAAYHGTVNLLLDISPRAF-MLSSEKKPWV 52 (284)
Q Consensus 1 seA~e~AlklAr~~~~---------------------------r~~il~~~~~yHG~t~~~~~~~~~~~-~~~~~~~~~~ 52 (284)
|||||+|||+||+|++ |.+||+|++||||+|.+++++++... ..........
T Consensus 132 sEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~ 211 (464)
T TIGR00699 132 SDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDW 211 (464)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCc
Confidence 7999999999998832 33899999999999999998876432 2111111223
Q ss_pred EEccCCCCcCCCCC---CCchHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 53 HVIPFPDTYRGEFS---ADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 53 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.++|+|+ ++++.. ...+.....+++.++++++++.+++||||+|||||++|+++++++||++|+++|++||++||+
T Consensus 212 ~~~p~p~-~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 212 PQAPFPS-LKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred eecCCCC-cccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 4567775 333321 111233455688899999866667999999999999999999999999999999999999999
Q ss_pred ecccccCccccCccccccccCCC--CcEEEeccccc-CCcceeEEEecHHHHHh---------chh--------------
Q psy11784 130 DEIQCGMGRSGSHFWAFQTQGAV--PDIITVGKPMG-NGMPIGAVITSRKIAES---------LNC-------------- 183 (284)
Q Consensus 130 DEv~tG~gr~G~~~~a~~~~g~~--pDiv~~sK~l~-~G~p~gav~~~~~i~~~---------~~~-------------- 183 (284)
|||||||||+|. +|+++++|+. |||+|+||+++ ||++++ ++ .+.. +..
T Consensus 291 DEV~tGfGrtG~-~fa~e~~gv~~~PDi~t~gK~lg~gG~~~~----~~-~~~~~~~~~~~~T~~gnp~~~aaa~a~L~~ 364 (464)
T TIGR00699 291 DEVQTGVGATGK-FWAHEHWNLDDPPDMVTFSKKFQTAGYFFH----DP-AFRPNKPYRQFNTWMGDPSRALILREIIQE 364 (464)
T ss_pred eeeeeCCCCCcc-hhHHHhcCCCCCCCEEEehhhhccCCcccc----ch-hccCCCCcccccCCCCCHHHHHHHHHHHHH
Confidence 999999999998 8999999997 99999999996 575432 11 1110 000
Q ss_pred ------hhhHHHHHHHHHHHHHhc---------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEE
Q psy11784 184 ------LDDNRPSGKYLVRPLGIN---------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLL 242 (284)
Q Consensus 184 ------l~~~~~~~~~l~~~L~~~---------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr 242 (284)
++++++++++|+++|+++ .|+|+++++ ++...+..+.+.++++|+++.+.+ .++||
T Consensus 365 l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~-~~~~~~~~i~~~~~~~Gvl~~~~g--~~~ir 441 (464)
T TIGR00699 365 IKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDT-PDEAKRDKLLKKARNNGVNIGGCG--VKAIR 441 (464)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEec-CCHHHHHHHHHHHHHCCcEEecCC--CCeEE
Confidence 458889999999999765 466788887 344457889999999999998642 48999
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l 265 (284)
|.||+++|++|||+++++|++++
T Consensus 442 ~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 442 LRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred EeCCCCCCHHHHHHHHHHHHHhC
Confidence 99999999999999999998764
No 52
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=3.1e-49 Score=369.23 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=203.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc-ccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM-LSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||||+|+|+||+||||++||+|+++|||+|.++++.++.... ........+...+.|+.++.++++ .+.
T Consensus 119 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 189 (428)
T PRK12389 119 TEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFND---------IEA 189 (428)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCC---------HHH
Confidence 6999999999999999999999999999999999988653211 100000111101224445555654 677
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.++.+++++||||+||+||++|+++||++||++|+++|++||++||+||||||| |+|. +|+++++|+.|||+|+|
T Consensus 190 l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~-~~a~~~~gv~PDivt~g 267 (428)
T PRK12389 190 LKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMY-GGAQDLLGVEPDLTALG 267 (428)
T ss_pred HHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCc-chhhHHhCCCCCeeeec
Confidence 888887666679999999999999999999999999999999999999999999999 9986 67888999999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|+++||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 268 K~lggG~Pi~av~~~~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~ 347 (428)
T PRK12389 268 KIIGGGLPIGAYGGRKDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKLDRLGAMLEEGILEAAEKHGI 347 (428)
T ss_pred hhhcCCCceeEEeEHHHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999999987731 458999999999999874
Q ss_pred ------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.+.++++++..+ ......+.+.|+++||++.+.+ .+. +.||+++|++|||++++++++
T Consensus 348 ~~~v~r~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~--~~~~l~~t~e~id~~~~~l~~ 423 (428)
T PRK12389 348 TITINRLKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAPSK--YEA--WFLTTAHTEEDIEETLEAVDR 423 (428)
T ss_pred CEEEEecCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeecCC--CCC--eeecCCCCHHHHHHHHHHHHH
Confidence 123667877521 1235678899999999998753 233 468999999999999999999
Q ss_pred HHHH
Q psy11784 264 IFTS 267 (284)
Q Consensus 264 ~l~~ 267 (284)
++++
T Consensus 424 ~l~~ 427 (428)
T PRK12389 424 AFAQ 427 (428)
T ss_pred HHHh
Confidence 9865
No 53
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.1e-48 Score=361.13 Aligned_cols=248 Identities=24% Similarity=0.396 Sum_probs=207.3
Q ss_pred CcHHHHHHHHHHHcc---C----CccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAYT---G----RQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~---~----r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
|||||+|||+||+|+ | |++||+|++||||+|.+++++++..... . ...+..+.++| +++
T Consensus 108 seA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~--------~~d---- 175 (408)
T PRK04612 108 TEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVD--------FND---- 175 (408)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcC--------CCC----
Confidence 699999999999994 3 6789999999999999999887543211 1 11112222233 332
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
.+.+++.++ .++++|||+||+|+.||+++++++|+++|+++|++||++||+|||||||||+|+ +|+.+++++
T Consensus 176 -----~~~l~~~~~--~~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~-~~a~~~~~~ 247 (408)
T PRK04612 176 -----VEALEAAMA--GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGT-LFAHWQEQV 247 (408)
T ss_pred -----HHHHHHhhC--CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-hhhhhhcCC
Confidence 567777774 456999999999999999999999999999999999999999999999999997 788888899
Q ss_pred CCcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 152 VPDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
.||++|+||++++|+|+|++++++++++.+.. .+++++++++|+++|+++
T Consensus 248 ~pdi~t~~K~l~~G~piga~~~~~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~l~~l~ 327 (408)
T PRK04612 248 TPDIVTLAKALGGGFPIGAMLAGPKVAETMQFGAHGTTFGGNPLAAAVARVALRKLASPQIAANVARQSAALRAGLEALN 327 (408)
T ss_pred CCCEEEEcchhcCCCceEEEEECHHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998876543 447889999999999886
Q ss_pred -----------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -----------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -----------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|+|+++++.+. ...+..+++.|+++||++.+.+ .+++|+.||+++|++|||+++++|+++++++.
T Consensus 328 ~~~~~i~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~g--~~~lRl~Ppl~it~eeid~~l~~l~~~l~~~~ 405 (408)
T PRK04612 328 AEFGVFAQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQAG--PDVLRFVPALNLTDAELADGLARLRLALADYV 405 (408)
T ss_pred hhCCCeeeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeCC--CCEEEEcCCccCCHHHHHHHHHHHHHHHHHHh
Confidence 699999999632 3456789999999999998643 48999999999999999999999999998764
Q ss_pred h
Q psy11784 270 M 270 (284)
Q Consensus 270 ~ 270 (284)
.
T Consensus 406 ~ 406 (408)
T PRK04612 406 A 406 (408)
T ss_pred h
Confidence 3
No 54
>KOG1403|consensus
Probab=100.00 E-value=1.4e-49 Score=339.03 Aligned_cols=273 Identities=37% Similarity=0.645 Sum_probs=244.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCch---HHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDP---QAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 75 (284)
||||+.|+||||.||+++.+|+++.+|||+....+-+|++++..+ ...++++|..|.|+.||+.|.++.. +....
T Consensus 112 SEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~ 191 (452)
T KOG1403|consen 112 SEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGAL 191 (452)
T ss_pred chhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhh
Confidence 799999999999999999999999999999999999999998886 3457999999999999998876432 23457
Q ss_pred HHHHHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 76 YAQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 76 ~~~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
|.+.++++++ ..+.++||+|.|..|+-||.+.||++|++.+.+..+.+|-+.|.||||+||||.|+++|+++.|++.
T Consensus 192 Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fi 271 (452)
T KOG1403|consen 192 YADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFI 271 (452)
T ss_pred hhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccc
Confidence 7888888887 2344599999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
|||+|++|.+|+|.|+++++.++++.++|.. .++..++|++|...|+++
T Consensus 272 PDIVtmgKpmGNGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~ 351 (452)
T KOG1403|consen 272 PDIVTMGKPMGNGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRL 351 (452)
T ss_pred cchheecccCCCCCeeeEEeccHHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998865 347888899999988877
Q ss_pred ------------cCceeEEEEe-------cccHHHHHHHHHHHH-CCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 ------------LHIFWCLILL-------SITYYLYRYTRRMKE-AKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 ------------~G~~~~i~~~-------~~~~~~~~~~~~l~~-~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|+|++|+++ |+...+..++.+|++ +||++...+|..|.|.|.||++.+++++++++..|
T Consensus 352 k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGPh~NilKiKPPmCFneena~e~v~~l 431 (452)
T KOG1403|consen 352 KQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGPHRNILKIKPPMCFNEENADEFVLGL 431 (452)
T ss_pred hhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCCCCceeecCCCcccChhhHHHHHHHH
Confidence 7999999998 556677788888986 58999999999999999999999999999999999
Q ss_pred HHHHHHHhhccc
Q psy11784 262 NRIFTSLQMDSS 273 (284)
Q Consensus 262 ~~~l~~~~~~~~ 273 (284)
+++|.-+.+...
T Consensus 432 d~iLT~mee~~~ 443 (452)
T KOG1403|consen 432 DEILTVMEERLA 443 (452)
T ss_pred HHHHHHHHHHHh
Confidence 999987765443
No 55
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=100.00 E-value=1.5e-48 Score=366.78 Aligned_cols=253 Identities=26% Similarity=0.378 Sum_probs=200.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcc-cccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAF-MLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||||+|||+||+||||++||+|+|+|||++++....+.... .............+.++.+..+|++ ++.
T Consensus 165 sEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd---------~~~ 235 (474)
T PLN02482 165 TEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYND---------LEA 235 (474)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCC---------hHH
Confidence 699999999999999999999999999999865443321110 0000001111111123444556664 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++++++.+++++||||+||+||++|+++|+++||++|+++|++||++||+||||||| |+|. +|+++++|+.||++|+|
T Consensus 236 l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~-~ga~~~~gv~PDi~t~g 313 (474)
T PLN02482 236 VKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAY-GGAQEYFGITPDLTTLG 313 (474)
T ss_pred HHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCc-chHhHHhCCCCCEEEec
Confidence 888887666779999999999999999999999999999999999999999999999 9997 78999999999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|+++||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 314 K~lggG~Pigav~g~~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~g~ 393 (474)
T PLN02482 314 KVIGGGLPVGAYGGRREIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEYLDKITKKLIQGILEAGKKAGH 393 (474)
T ss_pred chhhCCCceEEEEEcHHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987641 458889999999999876
Q ss_pred ------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.+.|+++++.. +......+.+.|+++||++.+.++.. + .||++||++|||++++++++
T Consensus 394 ~~~~~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~~~~~~---~-~psl~ht~~dId~~l~al~~ 469 (474)
T PLN02482 394 EMCGGYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAPSQFEA---G-FTSLAHTEEDIDFTIAAAER 469 (474)
T ss_pred CEEEcccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEeccCCCC---C-cCCCCCCHHHHHHHHHHHHH
Confidence 13356776641 11235678899999999998753311 1 49999999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 470 ~l~~~ 474 (474)
T PLN02482 470 VLARI 474 (474)
T ss_pred HHHhC
Confidence 98753
No 56
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=9.9e-49 Score=353.56 Aligned_cols=250 Identities=26% Similarity=0.323 Sum_probs=203.8
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc---cc--CCCCCceEEccCCCCcCCCCCCCchHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM---LS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQK 75 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (284)
|||+..|||+||.||||++|+.|+|+|||++++++.-.++... .+ ++.+.. ...+....+||+
T Consensus 119 TEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~----~a~~ti~~~yND-------- 186 (432)
T COG0001 119 TEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPAD----VAKHTLVLPYND-------- 186 (432)
T ss_pred hHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChh----hhccEEEecCCC--------
Confidence 7999999999999999999999999999999887743221111 01 222211 011222345665
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
++.+++++++.+++|||||+|||+|+.|.++|.++||+.|+++|++||++||+|||+||| |... .+++.+||++||+
T Consensus 187 -~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGF-R~~~-gGaq~~~gi~PDl 263 (432)
T COG0001 187 -LEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGF-RVAL-GGAQGYYGVEPDL 263 (432)
T ss_pred -HHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhc-ccCC-cccccccCcCcch
Confidence 899999999888899999999999999999999999999999999999999999999999 7775 5788999999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
.||||.+|||+|+|++.+++++|+.+.. .+++.+.+++|++.|++.
T Consensus 264 ttlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~ 343 (432)
T COG0001 264 TTLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAA 343 (432)
T ss_pred hhhhhhhcCCcceeeeccHHHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999997655 347888899999999887
Q ss_pred -----------cCceeEEEEec------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHH
Q psy11784 202 -----------LHIFWCLILLS------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 202 -----------~G~~~~i~~~~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~ 258 (284)
.|.|+.+.+.. +.+...++.+.|+++||++.|.... ....+..||+++||+.+
T Consensus 344 ~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~e----a~flS~ahte~di~~~~ 419 (432)
T COG0001 344 ERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFE----AGFLSTAHTEEDIDRTL 419 (432)
T ss_pred HHhCCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcccCCcccc----ceeeecccCHHHHHHHH
Confidence 67788877762 1223456777999999999975321 23447899999999999
Q ss_pred HHHHHHHHHHh
Q psy11784 259 STLNRIFTSLQ 269 (284)
Q Consensus 259 ~~l~~~l~~~~ 269 (284)
++++++++++.
T Consensus 420 ~a~~~~~~~~~ 430 (432)
T COG0001 420 EAADEAFKELA 430 (432)
T ss_pred HHHHHHHHHhh
Confidence 99999998874
No 57
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=100.00 E-value=2.1e-48 Score=382.78 Aligned_cols=261 Identities=21% Similarity=0.260 Sum_probs=201.9
Q ss_pred CcHHHHHHHHHHH-cc------------------CCccEEEEcCCCcccchhhhcCCCCc-cccc--CC-CCCceEEccC
Q psy11784 1 SEANDLALQLARA-YT------------------GRQNIVVVDAAYHGTVNLLLDISPRA-FMLS--SE-KKPWVHVIPF 57 (284)
Q Consensus 1 seA~e~AlklAr~-~~------------------~r~~il~~~~~yHG~t~~~~~~~~~~-~~~~--~~-~~~~~~~~~~ 57 (284)
|||||+||||||+ |+ +|.+||+|+|||||.|.+++++++.. ++.. .. ......+++.
T Consensus 437 SeAvE~AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~ 516 (817)
T PLN02974 437 STAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDP 516 (817)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCC
Confidence 7999999999964 62 48899999999999999999987532 2111 11 1112223333
Q ss_pred CCCc-CC-------CCC--C--------------------CchHHHHHHHHHHHHHHHh-----cCCCeeEEEEcce-ec
Q psy11784 58 PDTY-RG-------EFS--A--------------------DDPQAAQKYAQAARNIMEA-----HRDNIATLICEPV-FV 101 (284)
Q Consensus 58 ~~~~-~~-------~~~--~--------------------~~~~~~~~~~~~l~~~i~~-----~~~~vaavi~Epv-~~ 101 (284)
|..+ +. ++. + +.++....|++.+++.|+. .++++||||+||+ ||
T Consensus 517 P~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqG 596 (817)
T PLN02974 517 PTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHG 596 (817)
T ss_pred CccccccccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccC
Confidence 4321 10 000 0 1223455677888888863 2356999999995 99
Q ss_pred CCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecccccCC-cceeEEEecHHHHHh
Q psy11784 102 VHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNG-MPIGAVITSRKIAES 180 (284)
Q Consensus 102 ~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~ 180 (284)
.||+++++++|+++|+++|++||++||+|||+|||||+|+ +|+++++|+.|||+|+||+|+|| +|+|++++++++++.
T Consensus 597 aGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~-~fa~e~~gv~PDIi~~gKgLtgG~~Plaa~l~~~~I~~~ 675 (817)
T PLN02974 597 AGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV-ESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEA 675 (817)
T ss_pred CCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc-hhhHHhcCCCCCEEeecccccCCCCccEEEEEcHHHHHh
Confidence 9999999999999999999999999999999999999998 89999999999999999999999 599999999999997
Q ss_pred chh---------------------------------------hhhHHHHHHHHHHHHH-hc-----------cCceeEEE
Q psy11784 181 LNC---------------------------------------LDDNRPSGKYLVRPLG-IN-----------LHIFWCLI 209 (284)
Q Consensus 181 ~~~---------------------------------------l~~~~~~~~~l~~~L~-~~-----------~G~~~~i~ 209 (284)
+.. .++.+++++++.+.|. .+ .|+|++++
T Consensus 676 f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VRg~Gl~~~ie 755 (817)
T PLN02974 676 FRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVVSLGTVLALE 755 (817)
T ss_pred hccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEEeeeeEEEEE
Confidence 731 1134445555666662 22 89999999
Q ss_pred Eecc-------cHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 210 LLSI-------TYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 210 ~~~~-------~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++.+ ...+..+.+.++ ++||++++. +++|++.||+.+++++++++++++.+.+
T Consensus 756 l~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~---Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 756 LDAEGSGSGYSSLYARSVVRRLRREDGIYARPL---GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred EecCCcccccchHHHHHHHHHHHHhCCEEEEec---CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 9732 123567888899 999999864 5899999999999999999999998765
No 58
>KOG1401|consensus
Probab=100.00 E-value=9.3e-49 Score=346.55 Aligned_cols=247 Identities=28% Similarity=0.478 Sum_probs=199.8
Q ss_pred CcHHHHHHHHHHHccCC------ccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYTGR------QNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~~r------~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||.|||+||+++.+ .+||.|+|||||+|.++++++++. ++.+ ++ -.|+...+.+++
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p--------~~p~v~~~~ynd----- 192 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDP--------IAPDVVTAEYND----- 192 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCC--------CCCceeecccCC-----
Confidence 79999999999999754 459999999999999999987442 2221 11 124444455565
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
..+++++++.+.++|||||+||+||+||..+++++||..|+.+|+++|++||+|||||||||+|. .|++++++++
T Consensus 193 ----~t~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~-~~a~e~~~~~ 267 (433)
T KOG1401|consen 193 ----STALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGY-GWAQEYFGVT 267 (433)
T ss_pred ----HHHHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccch-HHHHHHhCcC
Confidence 78999999988888999999999999999999999999999999999999999999999999998 8999999999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
|||.|++|.|+||+|+||+++++++++.+.. ++++.+.++.|++.|.+
T Consensus 268 PDI~t~aK~L~gGlPigA~~v~~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e 347 (433)
T KOG1401|consen 268 PDITTVAKPLGGGLPIGATGVRDKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDE 347 (433)
T ss_pred CcceeehhhccCCceeEEEeehHHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998865 55889999999999987
Q ss_pred c-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEc--CCCCC--HHHHHHHHHHH
Q psy11784 201 N-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLP--AMCLT--TENVLFIVSTL 261 (284)
Q Consensus 201 ~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p--~l~~t--~~~id~~~~~l 261 (284)
. .|+++++++. ....++.....+.|.+..+.+. -...+|+.| ++++. +|.++++++++
T Consensus 348 ~~~~~~~~i~g~~grgl~ig~~~~---~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~i~ 424 (433)
T KOG1401|consen 348 YLKKTPNSICGGVGRGLVIGFEFE---GPVYKFADAAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLTIL 424 (433)
T ss_pred HhccCCCceeeeeeeEEEEEEEEe---echhhhhhhhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHHHH
Confidence 6 5677777765 1233344444444444433211 013577777 55554 99999999999
Q ss_pred HHHHHHH
Q psy11784 262 NRIFTSL 268 (284)
Q Consensus 262 ~~~l~~~ 268 (284)
.+.++++
T Consensus 425 ~~~l~~~ 431 (433)
T KOG1401|consen 425 EKVLSAL 431 (433)
T ss_pred HHHHHHh
Confidence 9998876
No 59
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.6e-48 Score=354.66 Aligned_cols=238 Identities=24% Similarity=0.450 Sum_probs=191.2
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||+|+|+|+||.|+||++||+|+++|||+|.+++++++...... ......+.++|+ ++ .+
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~--------~d---------~~ 153 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF--------ND---------VE 153 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC--------CC---------HH
Confidence 699999999999999999999999999999999998875432211 111112222333 22 45
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
.+++.+. +++||||+||+||++|++++|++||++|+++|++||++||+||||||| |+|+ +|+++++++.|||+|+
T Consensus 154 ~l~~~i~---~~~aAvivEpi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~-~~a~~~~gv~PDiv~~ 228 (364)
T PRK04013 154 AAKEAIT---KETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGK-FLAIEHYKVEPDIVTM 228 (364)
T ss_pred HHHHHhc---CCcEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCc-hhHHHhcCCCCCEEEe
Confidence 6676664 579999999999999999999999999999999999999999999999 9998 8999999999999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-------------------------hhhHHHHHHHHHHHHH-h----c--cCcee
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-------------------------LDDNRPSGKYLVRPLG-I----N--LHIFW 206 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-------------------------l~~~~~~~~~l~~~L~-~----~--~G~~~ 206 (284)
||+++||+|+|+++.++++...... +++++++ +. .+. . . .|+|+
T Consensus 229 gK~lggG~P~~a~~~~~~~~~~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~---l~-~l~~~~v~~vRG~Gl~~ 304 (364)
T PRK04013 229 GKGIGNGVPVSLTLTNFDVERGKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGEK---FI-EIKGERVVTTRGRGLMI 304 (364)
T ss_pred cccccCCceeEEEEecccccCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH---HH-HhccCcceeeeeCcEEE
Confidence 9999999999999999876322111 2233322 21 221 1 1 89999
Q ss_pred EEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 207 CLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 207 ~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
++++.. .+..+.+.++++|+++.+.+ .+++||.||+++|++|+|+++++|+++++++.
T Consensus 305 gve~~~---~~~~i~~~~~~~Gll~~~~g--~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 305 GIVLKK---PVGKYVEELQNRGYLVHTAG--QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred EEEeCC---cHHHHHHHHHhCCcEEeeCC--CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 999962 24678899999999998643 48999999999999999999999999998754
No 60
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=7.6e-48 Score=357.09 Aligned_cols=245 Identities=24% Similarity=0.427 Sum_probs=205.7
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||+|| +|.+||+++++|||+|.+++++++..... . ...+..+.++ +|++
T Consensus 102 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d----- 168 (397)
T TIGR03246 102 AEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHA--------PYND----- 168 (397)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEe--------CCCC-----
Confidence 699999999999995 89999999999999999888876532111 0 1112222222 3333
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
++++++.+. +++++||+||+++++|.++|+++||++|+++|++||++||+|||||||||+|+ +|+++++|+.
T Consensus 169 ----~~~l~~~l~---~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~-~~a~~~~gv~ 240 (397)
T TIGR03246 169 ----LAAAKALIS---DKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVT 240 (397)
T ss_pred ----HHHHHHHhc---cCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcccc-chhhhhcCCC
Confidence 677888775 46999999999999999999999999999999999999999999999999998 7888999999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
||++|+||+++||+|+|++++++++++.+.. ++++++++++++++|+++
T Consensus 241 pDi~t~~K~lggG~pigav~~~~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~ 320 (397)
T TIGR03246 241 PDILTSAKALGGGFPIGAMLTTTEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINA 320 (397)
T ss_pred CCEEEeehhhhCCcceeEEEEcHHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999887643 458889999999999875
Q ss_pred ----------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ----------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ----------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++++.+. ......+++.|+++|+++.+.+ .+++|+.||+++|++|||+++++|+++++++
T Consensus 321 ~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~g--~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 321 RYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIAG--PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred cCCCeEeeecCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeecC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 577888887532 2457789999999999998643 4799999999999999999999999998764
No 61
>PLN00144 acetylornithine transaminase
Probab=100.00 E-value=1.1e-47 Score=353.90 Aligned_cols=244 Identities=26% Similarity=0.482 Sum_probs=205.1
Q ss_pred CcHHHHHHHHHHHccC-------------CccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCC
Q psy11784 1 SEANDLALQLARAYTG-------------RQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEF 65 (284)
Q Consensus 1 seA~e~AlklAr~~~~-------------r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 65 (284)
|||||+|+|+||.||+ |++||+|+++|||+|.+++++++..... . ......+.++|+
T Consensus 82 seA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-------- 153 (382)
T PLN00144 82 TEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY-------- 153 (382)
T ss_pred HHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCC--------
Confidence 7999999999999986 5789999999999999999887643211 1 111112223333
Q ss_pred CCCchHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc
Q psy11784 66 SADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA 145 (284)
Q Consensus 66 ~~~~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a 145 (284)
++ .+.+++.++ .++++|||+||+|+.+|..+++++|+++|+++|++||++||+|||||||||+|+ +|+
T Consensus 154 ~d---------~~~l~~~~~--~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~-~~~ 221 (382)
T PLN00144 154 GN---------LEAARKLIQ--KGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGY-LWA 221 (382)
T ss_pred CC---------HHHHHHhcC--CCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-Hhh
Confidence 32 577777774 356999999999999999999999999999999999999999999999999998 788
Q ss_pred ccccCCCCcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHH
Q psy11784 146 FQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 146 ~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~ 196 (284)
++++++.||++||||++++|+|+|++++++++++.+.. .++++++++++++
T Consensus 222 ~~~~~~~PDi~t~sK~l~~G~pig~v~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 301 (382)
T PLN00144 222 HEAYGVEPDIMTLAKPLAGGLPIGAVLVTEKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRE 301 (382)
T ss_pred hhhcCCCCCEEEecccccCCcceEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999999987753 3478888999888
Q ss_pred HHHhc------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 197 PLGIN------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 197 ~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|+++ .|+|+++++. .....+++.++++||++.+.+. ++.|||.||+++|++++++++++|+++
T Consensus 302 ~l~~~~~~~~~~~~vrg~G~~~~l~l~---~~~~~~~~~~~~~Gv~i~~~~~-~~~lrl~p~~~~~~~~i~~~~~~l~~~ 377 (382)
T PLN00144 302 LLRRKLGGNPHVKEVRGVGLLVGIQLD---VPAGPLVDACRDSGLLVLTAGK-GDVVRLVPPLVISEAELEQAVEILADC 377 (382)
T ss_pred HHHHHHhhCCCceeeecCceEEEEEec---CccHHHHHHHHHCCeEEeecCC-CCEEEEeCCCccCHHHHHHHHHHHHHH
Confidence 88764 7889999983 2346789999999999988643 589999999999999999999999999
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 378 l~~~ 381 (382)
T PLN00144 378 LPAL 381 (382)
T ss_pred HHhc
Confidence 8764
No 62
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.3e-47 Score=354.69 Aligned_cols=244 Identities=25% Similarity=0.417 Sum_probs=197.7
Q ss_pred CcHHHHHHHHHHHcc-----CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCC-CCcCCCCCCCchHHHH
Q psy11784 1 SEANDLALQLARAYT-----GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFP-DTYRGEFSADDPQAAQ 74 (284)
Q Consensus 1 seA~e~AlklAr~~~-----~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 74 (284)
|||||+|+|+||+|+ +|.+||+|+++|||+|.+++++++...... . +.|.+ .....++++
T Consensus 103 seA~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~-~------~~~~~~~~~~~~~~d------- 168 (395)
T PRK03715 103 AEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDT-I------FAPQVPGFPKAELND------- 168 (395)
T ss_pred HHHHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCccccc-C------CCCCCCCceeeCCch-------
Confidence 699999999999984 678999999999999999988875431110 0 01111 111112232
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 75 KYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
++.+++.+. +++++||+||+||++|+++||++||++|+++|++||++||+|||||||||+|+ +|+++++|+.||
T Consensus 169 --~~~l~~~l~---~~~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~-~~a~~~~gv~PD 242 (395)
T PRK03715 169 --IASVEKLIT---DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGT-LFAYELSGIEPD 242 (395)
T ss_pred --HHHHHHHcC---CCceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcc-hhhHhhcCCCCc
Confidence 567777774 46999999999999999999999999999999999999999999999999998 889999999999
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
|+|+||+++||+|+|+++++++++..... ++++++++++|+++|+++
T Consensus 243 i~t~gK~lg~G~p~~av~~~~~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~ 322 (395)
T PRK03715 243 IMTLGKGIGGGVPLAALLAKAEVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLAPGFLEGVRARGEYLKEKLLELSEERG 322 (395)
T ss_pred eeeehhhhhCCcceEEEEEccccccccCCCcCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 99999999999999999999998632111 458889999999999865
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHC---CcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEA---KIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~---Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+|+++++..+ ....+.+.+++. |+++.+. .+++|||.||+++|++|||+++++|+++++++
T Consensus 323 i~~vrG~Glm~~i~l~~~--~~~~~~~~~~~~~~~Gi~~~~~--~~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 323 LEGERGEGLLRALLLGKD--IGPQIVEKARDMQPDGLLLNAP--RPNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred cCeEEcceeEEEEEecCc--hHHHHHHHHHhccCCCEEEeec--CCCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 689999999521 234455555555 9999754 35899999999999999999999999998765
No 63
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=100.00 E-value=4.3e-47 Score=354.39 Aligned_cols=256 Identities=24% Similarity=0.364 Sum_probs=209.1
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcc--ccc-CCCCCceEEccCCCCcCCCCCCCchH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAF--MLS-SEKKPWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
|||||+|+|+||.|+ +|.+||+|+++|||+|.+++++++... ... .+..+...+.|.|... +.. +
T Consensus 115 seA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~~---~ 188 (427)
T TIGR00508 115 SVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNR---FDE---E 188 (427)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCcc---ccc---h
Confidence 699999999999985 688999999999999999998875421 110 1112222334555431 110 1
Q ss_pred HHHHHHHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 72 AAQKYAQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
....++++++++++++.+++||||+||+ |++||.++++++||++|+++|++||++||+|||||||||+|+ +|++++++
T Consensus 189 ~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~-~~~~~~~~ 267 (427)
T TIGR00508 189 WNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGK-LFACEHAG 267 (427)
T ss_pred hHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-cchhhhcC
Confidence 1122367788888766667999999998 999999999999999999999999999999999999999998 78999999
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhchh----------------------------------hhhHHHHHHHHH
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLNC----------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~----------------------------------l~~~~~~~~~l~ 195 (284)
+.|||+|+||+++||+ |++++++++++++.+.. ++++++++++|+
T Consensus 268 v~pDi~~~gK~l~gG~~p~~a~~~~~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 268 VVPDILCVGKALTGGYMTLSATVTTDKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLK 347 (427)
T ss_pred CCCCEEEechhhhcCcccceEEEEcHHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 9999999999999995 99999999999876531 458889999999
Q ss_pred HHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 196 ~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
++|+++ .|+++++++. +......+.+.|+++||++.+. ++.+|+.||+++|++|||+++++|+++
T Consensus 348 ~~L~~l~~~~~i~~vrg~G~~~~i~~~-~~~~~~~~~~~l~~~Gv~~~~~---~~~l~~~ppl~~t~~~id~~~~~l~~~ 423 (427)
T TIGR00508 348 RELSPLRKNPVVKDVRVLGAIGVVEMY-KPVNVEELQKKFVEQGVWIRPF---GKLIYVMPPYIITTEQLQKLTAALIEA 423 (427)
T ss_pred HHHHHhhcCCCEEeEeccccEEEEEEC-CccCHHHHHHHHHHCCeEEEec---CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 999876 4889999985 3334678999999999999864 468999999999999999999999999
Q ss_pred HHH
Q psy11784 265 FTS 267 (284)
Q Consensus 265 l~~ 267 (284)
+++
T Consensus 424 l~~ 426 (427)
T TIGR00508 424 LHE 426 (427)
T ss_pred Hhc
Confidence 854
No 64
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=3.6e-47 Score=355.42 Aligned_cols=254 Identities=22% Similarity=0.338 Sum_probs=197.9
Q ss_pred CcHHHHHHHHHHHccC------------CccEEEEcCCCcccchhhhcCCCCc-cccc-CCCCCceEEccCCCCcCCCCC
Q psy11784 1 SEANDLALQLARAYTG------------RQNIVVVDAAYHGTVNLLLDISPRA-FMLS-SEKKPWVHVIPFPDTYRGEFS 66 (284)
Q Consensus 1 seA~e~AlklAr~~~~------------r~~il~~~~~yHG~t~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 66 (284)
|||||+|||+||+||+ |++||+|++||||+|.+++++++.. .... .+..+.. +++.|+. +++++
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~-~~~~p~~-~~~~~ 190 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWP-RIDNPKL-TFPLD 190 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCc-cCCCCcc-cCCcc
Confidence 7999999999999973 4789999999999999999887642 2111 1111111 2334433 22222
Q ss_pred CC----chHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc
Q psy11784 67 AD----DPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH 142 (284)
Q Consensus 67 ~~----~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~ 142 (284)
.+ .......+++++++.++.+++++||||+|||||++|++++|++||++|+++|++||++||+|||||||||+|+
T Consensus 191 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~- 269 (431)
T TIGR03251 191 APNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGT- 269 (431)
T ss_pred ccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccch-
Confidence 11 1223345678888888866677999999999999999999999999999999999999999999999999998
Q ss_pred cccccccCCCCcEEEecccccCCcceeEEEecHHH---HH-hch------h------------------------hhhHH
Q psy11784 143 FWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKI---AE-SLN------C------------------------LDDNR 188 (284)
Q Consensus 143 ~~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i---~~-~~~------~------------------------l~~~~ 188 (284)
+|+++++|+.||++|+||++ |+++++.++++ ++ .+. . +++++
T Consensus 270 ~~a~~~~gv~PDi~~~gK~~----~~~g~~~~~~i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~ 345 (431)
T TIGR03251 270 AWAYQQLGVQPDIVAFGKKT----QVCGIMAGRRVDEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEERLVDNAR 345 (431)
T ss_pred HHHHHhcCCCCCEEEecccC----ccceEEecchHHHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 88999999999999999997 45566665543 22 111 0 35888
Q ss_pred HHHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 189 PSGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 189 ~~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
+++++|+++|+++ .|+|+++++. .......+++.|+++||++.+.+ .+.+||+||+++|++|||
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~-~~~~~~~~~~~l~~~Gvl~~~~g--~~~lr~~P~l~~t~~eid 422 (431)
T TIGR03251 346 VQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLP-STADRDEVIRQLYREGVLLLGCG--ERSIRFRPPLTVTREEID 422 (431)
T ss_pred HHHHHHHHHHHHHHHhCccceecccccceeEEEEeC-CHHHHHHHHHHHHhCCeEEecCC--CCeEEEECCccCCHHHHH
Confidence 9999999988764 6789999984 44456789999999999998643 478999999999999999
Q ss_pred HHHHHHHHH
Q psy11784 256 FIVSTLNRI 264 (284)
Q Consensus 256 ~~~~~l~~~ 264 (284)
+++++|+++
T Consensus 423 ~~l~~l~~~ 431 (431)
T TIGR03251 423 AAIDAIRRV 431 (431)
T ss_pred HHHHHHHhC
Confidence 999999763
No 65
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=4.8e-47 Score=353.69 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=199.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccch---hhhcCCCCcccccCCCCCceE-EccCCCCcCCCCCCCchHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVN---LLLDISPRAFMLSSEKKPWVH-VIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
|||||+|+|+||+||||++|++|++||||+|+ ++++.++.... ..+.... ..+.++....+|++
T Consensus 120 sEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~d--------- 187 (433)
T PRK00615 120 TEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLD---TLTHLVDTDLAHPLTLSLPYND--------- 187 (433)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcC---cCCCCCCCCCCCCCeEeCCCCC---------
Confidence 69999999999999999999999999999984 44444432100 0000000 01112222334543
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++++.+++|+||+||+||++|+++|+++||++|+++|++||++||+||||||| |+|. +|+++++|+.||++
T Consensus 188 ~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~-~ga~~~~gv~PDi~ 265 (433)
T PRK00615 188 FQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQ-GGAAAIYHVKPDIT 265 (433)
T ss_pred HHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccH-hHHHHhcCCCCCeE
Confidence 677888887666679999999999999999999999999999999999999999999999 9997 88999999999999
Q ss_pred EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|+||+++||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 266 ~~gK~lggG~p~~av~~~~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~ 345 (433)
T PRK00615 266 VYGKILGGGLPAAAVVAHKSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRS 345 (433)
T ss_pred EEcccccCCcceeeeeecHHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987631 458888999998887764
Q ss_pred ---------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVST 260 (284)
Q Consensus 202 ---------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~ 260 (284)
.|+|+++++..+ ......+.+.|+++||++.+..+... ..+..||++|||+++++
T Consensus 346 ~g~~v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~----~ls~~ht~~did~~~~a 421 (433)
T PRK00615 346 QGFPVSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSPSPFEAS----FLSSAHSMENLDYAQNV 421 (433)
T ss_pred cCCCeEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecCcccccc----ceecCCCHHHHHHHHHH
Confidence 688999999621 22345789999999999987543222 34779999999999999
Q ss_pred HHHHHHHH
Q psy11784 261 LNRIFTSL 268 (284)
Q Consensus 261 l~~~l~~~ 268 (284)
++++++.+
T Consensus 422 ~~~~~~~~ 429 (433)
T PRK00615 422 LIDSLEKV 429 (433)
T ss_pred HHHHHHHH
Confidence 99999876
No 66
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=8.6e-47 Score=350.98 Aligned_cols=248 Identities=25% Similarity=0.433 Sum_probs=207.5
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||+|+ +|.+|++|+++|||+|.+++++++...... .+++. +..+.++++
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~d----- 172 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPP--------DIRHAAYND----- 172 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCC--------CeeEeCCCC-----
Confidence 699999999999995 789999999999999998888775432110 11111 122233443
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
++++++.+. +++++||+||+++++|+++++++|+++|+++|++||++||+|||||||||+|+ +|+++++++.
T Consensus 173 ----~~~l~~~l~---~~~aaviiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~-~~~~~~~~v~ 244 (406)
T PRK12381 173 ----LNSASALID---DQTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGE-LYAYMHYGVT 244 (406)
T ss_pred ----HHHHHHhcc---CCeeEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcc-hhhhHhhCCC
Confidence 677787774 46999999999999999999999999999999999999999999999999998 7888899999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
||++++||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 245 pDi~t~sK~l~gG~~ig~~~~~~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~ 324 (406)
T PRK12381 245 PDVLTTAKALGGGFPIGAMLTTEKCASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINA 324 (406)
T ss_pred CCEEEehhhhhCCCceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999987643 347888999999998875
Q ss_pred ----------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 202 ----------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 202 ----------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|+|+++++.+. ...+..+.+.|+++||++.+.+ .+++||.||+++|+++|++++++|+++++++..
T Consensus 325 ~~~~~~~vrg~Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~~~ 402 (406)
T PRK12381 325 RYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIAG--PNVVRFAPALNISEEEITTGLDRFARACERFVS 402 (406)
T ss_pred hCCCEEEEecCeEEEEEEecCchhhHHHHHHHHHHHCCcEEeeCC--CCEEEEeCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 578888888522 2356788999999999998643 479999999999999999999999999988765
Q ss_pred c
Q psy11784 271 D 271 (284)
Q Consensus 271 ~ 271 (284)
+
T Consensus 403 ~ 403 (406)
T PRK12381 403 R 403 (406)
T ss_pred c
Confidence 4
No 67
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=3e-46 Score=350.39 Aligned_cols=246 Identities=23% Similarity=0.304 Sum_probs=194.9
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcC--CCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDI--SPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
|||||+|||+||.||||++|++|+|+|||++++++.. ++...... .+.+.. . .++....+|++
T Consensus 140 tEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~---~-~~~~~~~~~nd--------- 206 (453)
T PRK07046 140 TDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHD---L-TATTRVVEFND--------- 206 (453)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCcc---c-cCceEeeCCCC---------
Confidence 6999999999999999999999999999998776643 11110110 111110 0 11223344554
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+. .+++||||+||+||++|.++|+++||++|+++|++||++||+|||+| | |+|. +.+.+++|++||++
T Consensus 207 ~~~l~~~l~--~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-f-r~g~-Gg~~~~~gv~PDi~ 281 (453)
T PRK07046 207 LAALEAALA--DGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-I-SSGP-GGYTRAHGLEPDFL 281 (453)
T ss_pred HHHHHHHhC--CCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-C-ccCC-cchhHHhCCCccce
Confidence 678888884 45699999999999999999999999999999999999999999999 6 5775 34567789999999
Q ss_pred EecccccCCcceeEEEecHHHHHhch---------h-----------------------------hhhHHHHHHHHHHHH
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLN---------C-----------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~---------~-----------------------------l~~~~~~~~~l~~~L 198 (284)
|+||+++||+|+|++++++++++.+. . ++++++++++|+++|
T Consensus 282 t~gK~lggG~Pi~av~g~~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L 361 (453)
T PRK07046 282 VVGKPIAGGVPCAVYGFSAELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGL 361 (453)
T ss_pred eehhhhcCCCcceeeeehHHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998763 0 458889999999999
Q ss_pred Hhc------------cCceeEEEEec-------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 199 GIN------------LHIFWCLILLS-------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 199 ~~~------------~G~~~~i~~~~-------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
+++ .|+++.+.+.+ +......++..|+++||++.+. ++.++++|+ +|++|
T Consensus 362 ~~l~~~~~~~~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---~~~~~~~p~--~t~~d 436 (453)
T PRK07046 362 RAVIARHGLPWHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLITPF---HNMMLVCPA--TTAAD 436 (453)
T ss_pred HHHHHhCCCCeEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEecc---cCcEEEeCC--CCHHH
Confidence 875 67788887641 1123456788899999999862 467888886 89999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
||+++++++++++++.
T Consensus 437 id~~~~~~~~~l~~~~ 452 (453)
T PRK07046 437 VDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998763
No 68
>PLN02624 ornithine-delta-aminotransferase
Probab=100.00 E-value=8.2e-45 Score=343.02 Aligned_cols=248 Identities=22% Similarity=0.383 Sum_probs=202.7
Q ss_pred CcHHHHHHHHHHHcc--------CCccEEEEcCCCcccchhhhcCCCCcccc-c-CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAYT--------GRQNIVVVDAAYHGTVNLLLDISPRAFML-S-SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~~--------~r~~il~~~~~yHG~t~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||||+|||+||.|+ +|.+|++|.++|||+|.+++++++..... . .+.. |.....+|++
T Consensus 142 seA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~--------~~~~~~~~~d--- 210 (474)
T PLN02624 142 AEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLL--------PGHLKVDFGD--- 210 (474)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCC--------CCceEeCCCC---
Confidence 699999999999974 45689999999999999999887532111 1 1111 1111223333
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
++.+++.++...+++++||+||+++++|.++++++||++|+++|++||++||+||||+||||+|+ +|++++++
T Consensus 211 ------~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~-~~a~~~~~ 283 (474)
T PLN02624 211 ------LDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGK-MLACDWEE 283 (474)
T ss_pred ------HHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcc-hhhHHhcC
Confidence 57788888755567999999999999999999999999999999999999999999999999998 78888899
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++| +|+|++++++++++.+.. .+++.++++++++.|++
T Consensus 284 i~pDiv~lsK~lggG~~pigav~~~~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~l~~~~~~~~~~l~~~L~~ 363 (474)
T PLN02624 284 VRPDVVILGKALGGGVIPVSAVLADKDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEKLAERSAKLGQELRDQLQK 363 (474)
T ss_pred CCCCEEEecccccCCCCcceeeeecHHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 999999999999988 799999999998876542 22567788888888876
Q ss_pred c-------------cCceeEEEEecc---cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 201 N-------------LHIFWCLILLSI---TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 201 ~-------------~G~~~~i~~~~~---~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+ .|+|+++++... ...+.++++.|+++||++.+.+ +++|||.||+++|+++|++++++|+++
T Consensus 364 l~~~~~~~i~~vrg~G~~~~i~l~~~~~~~~~a~~~~~~L~e~GV~v~p~~--~~~lR~~p~l~~t~e~id~~l~~L~~~ 441 (474)
T PLN02624 364 IQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLKLKERGLLAKPTH--DTIIRLAPPLSISEDELQECSKALSDV 441 (474)
T ss_pred HHHhCCCceEEEEeeEEEEEEEecCCCcChHHHHHHHHHHHhCCeEEecCC--CCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 4 477888877421 2456789999999999998753 589999999999999999999999999
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
+..-
T Consensus 442 l~~~ 445 (474)
T PLN02624 442 LEHD 445 (474)
T ss_pred HHHH
Confidence 8654
No 69
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=100.00 E-value=1.2e-45 Score=335.36 Aligned_cols=203 Identities=35% Similarity=0.562 Sum_probs=168.1
Q ss_pred CcHHHHHHHHHH------HccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLAR------AYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr------~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|||+|| ..++|++|++|+++|||+|.+++++++...... ........++|+|+... ++.
T Consensus 86 seAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~-------~~~ 158 (339)
T PF00202_consen 86 SEAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAA-------DEE 158 (339)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHH-------HHH
T ss_pred hHHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccch-------hhh
Confidence 699999999999 778999999999999999999998875532221 22334455567776433 223
Q ss_pred HHHHHHHHHHHHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC
Q psy11784 73 AQKYAQAARNIME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA 151 (284)
Q Consensus 73 ~~~~~~~l~~~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~ 151 (284)
...+.+.+++.+. ...+++||||+|||||++|.+++|++||++|+++|++||++||+|||||||||+|+ +|+++++|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~-~~a~~~~gv 237 (339)
T PF00202_consen 159 EQACLNALEELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGK-FFASEHYGV 237 (339)
T ss_dssp HHHHHHHHHHHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSS-SSGHHHHTS
T ss_pred HHHHHHHHHHHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCC-ccceecccc
Confidence 3444566666555 34566999999999999999999999999999999999999999999999999998 899999999
Q ss_pred CCcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 152 VPDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 152 ~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
.||++|+||+++||+|+|++++++++++.+.. ++++++++++|+++|+++
T Consensus 238 ~PDiv~~gK~l~gG~p~sav~~~~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~~~~~~~~~g~~l~~~L~~l~ 317 (339)
T PF00202_consen 238 DPDIVTFGKGLGGGLPISAVLGSEEIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEEDLLERVRELGERLREGLRELA 317 (339)
T ss_dssp SSSEEEEEGGGGTTSSEEEEEEEHHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcccccccchhhhhhcccccccchhhccccccccccccccchHhhhhhhhHHHhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999998843 448899999999999987
Q ss_pred -----------cCceeEEEEe
Q psy11784 202 -----------LHIFWCLILL 211 (284)
Q Consensus 202 -----------~G~~~~i~~~ 211 (284)
.|+|++++++
T Consensus 318 ~~~~~i~~vrg~Gl~~~ie~~ 338 (339)
T PF00202_consen 318 ARYPLIGEVRGIGLMIGIELV 338 (339)
T ss_dssp HHTTTEEEEEEETTEEEEEES
T ss_pred HhCCCeEEEeeeCeEEEEEEE
Confidence 7999999884
No 70
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=3e-43 Score=328.97 Aligned_cols=260 Identities=23% Similarity=0.370 Sum_probs=212.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCc--cccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRA--FMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
|||||.|||+||.+++|.+||+|+++|||++.+++++++.. +..+ ...+..+...|+|..++. . ..+.++
T Consensus 112 sea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~----~---~~~~~~ 184 (425)
T PRK08088 112 SEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHG----V---SEDDAI 184 (425)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccC----c---cHHHHH
Confidence 68999999999999999999999999999999988876431 1111 111222333444432221 1 122346
Q ss_pred HHHHHHHH--hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIME--AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~--~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.++++++ ..++++++||+||+|+++|.++++++|+++|+++|++||+++|.||+|+||||+|+ +++++++++.||+
T Consensus 185 ~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~-~~~~~~~~~~pdi 263 (425)
T PRK08088 185 ASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGT-LFAMEQMGVAADL 263 (425)
T ss_pred HHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhHHhhcCCCCCE
Confidence 77888886 23466999999999999999999999999999999999999999999999999997 7788888999999
Q ss_pred EEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
.+|||++++|+|+|++++++++++.+.. ++++++.++++++.|+++
T Consensus 264 ~s~sK~l~~G~rig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~ 343 (425)
T PRK08088 264 TTFAKSIAGGFPLAGVTGRAEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIAEKHP 343 (425)
T ss_pred EEEeccccCCCcceeeEecHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999987754 447888888888888766
Q ss_pred -------cCceeEEEEe-------cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILL-------SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~-------~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+|+++++. +.......+++.|+++||++.+++..++.+||.||+.+|+++|++++++|.+++..
T Consensus 344 ~~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 344 EIGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CeEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecCCCCCCEEEEECCCCcCHHHHHHHHHHHHHHHHh
Confidence 4899999984 22345788999999999998876666799999999999999999999999999875
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 424 ~ 424 (425)
T PRK08088 424 A 424 (425)
T ss_pred h
Confidence 4
No 71
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.7e-42 Score=321.36 Aligned_cols=239 Identities=24% Similarity=0.419 Sum_probs=197.1
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCcc-ccc-CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAF-MLS-SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||||+|||+||+| +||.+||++.++|||++.+++++++... ... ......+.++ ++++
T Consensus 107 seA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d--- 175 (396)
T PRK04073 107 AEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKI--------PYGD--- 175 (396)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEe--------CCCC---
Confidence 69999999999998 5889999999999999999888775321 110 1111111222 2332
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
++.+++.+. +++++||+||+++++|.+.++++||++|+++|++||++||+||||+||||+|+ ++++++++
T Consensus 176 ------~~~l~~~i~---~~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~~ 245 (396)
T PRK04073 176 ------LEALKAAIT---PNTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGK-LFACDWDN 245 (396)
T ss_pred ------HHHHHHhcc---cCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcH-HHHhhhcC
Confidence 567777664 46899999999999999999999999999999999999999999999999997 77888889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++| +|+|++++++++++.+.. .++++++++++.+.|++
T Consensus 246 ~~pdi~~~sK~lg~gg~~ig~~~~~~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~ 325 (396)
T PRK04073 246 VTPDMYILGKALGGGVFPISCVAANRDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKE 325 (396)
T ss_pred CCCCEEEecccccCCCCcceEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHh
Confidence 999999999999987 899999999999987642 24677889999999877
Q ss_pred c----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|+|+++++. ..+..+++.|+++||++.+. .+++|||+||+++|++|+++++++|++++
T Consensus 326 l~~~~i~~~~~~g~~~~~~~~---~~~~~~~~~l~~~Gv~~~~~--~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 326 IDNPMIKEVRGRGLFIGVELN---EPARPYCEALKEEGLLCKET--HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred hcCCcccceecceEEEEEEec---chHHHHHHHHHHCCeEEecC--CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 4 5777888774 24568899999999999864 24799999999999999999999998875
No 72
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=3.7e-42 Score=319.70 Aligned_cols=246 Identities=23% Similarity=0.419 Sum_probs=201.9
Q ss_pred CcHHHHHHHHHHHcc------CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccC-CCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYT------GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPF-PDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 73 (284)
|||||+|+|+||.|+ +|.+||+|+++|||++.+++++++..... .+. .|. ++..+.++++
T Consensus 107 seA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~d------ 173 (403)
T PRK05093 107 AEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYS-DGF------GPKPADITHVPFND------ 173 (403)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhh-hcC------CCCCCCcEEeCCCC------
Confidence 689999999999995 68899999999999999887776432111 111 011 1122333443
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
++.+++.+. +++++||+||+++++|+.+++++|+++|+++|++||+++|+||||+||||+|+ +++++++++.|
T Consensus 174 ---~~~l~~~l~---~~~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~p 246 (403)
T PRK05093 174 ---LAAVKAVID---DHTCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGD-LFAYMHYGVTP 246 (403)
T ss_pred ---HHHHHHHhc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc-chhhhhcCCCC
Confidence 677777774 46999999999999999999999999999999999999999999999999997 67778889999
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|+++|||++++|+|+|++++++++++.+.. .++++++++++.+.|+++
T Consensus 247 di~s~sK~l~~G~rig~vv~~~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 326 (403)
T PRK05093 247 DILTSAKALGGGFPIGAMLTTAEIASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQK 326 (403)
T ss_pred CEEEecccccCCcceEEEEEcHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999887653 337778899999999875
Q ss_pred ---------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ---------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++++.+. .....++++.|+++||++.+.+ .+.+|+.||+.+|+++|++++++|+++++++
T Consensus 327 ~~~~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~g--~~~lRl~~~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 327 YGVFSEIRGMGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVAG--PDVLRFAPSLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred CCCeEeEeeCceEEEEEecCcchhHHHHHHHHHHHCCeEEecCC--CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 377888887422 1356789999999999998743 4799999999999999999999999998754
No 73
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=1.2e-42 Score=324.82 Aligned_cols=253 Identities=28% Similarity=0.374 Sum_probs=202.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccc-ccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFM-LSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||||+|+|+||.++||++||+|.++|||+|.++.+.++.... ..............++.++.+|++ ++.
T Consensus 116 seA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 186 (426)
T PRK00062 116 TEATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYND---------LEA 186 (426)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCC---------HHH
Confidence 6999999999999999999999999999999877766432111 000111110000012344555554 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+++..+++++||+||+||++|.++++++||++|+++|++||+++|+||||||| |+|. +++++++++.||++++|
T Consensus 187 l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~-r~g~-~~~~~~~~~~pDi~~~g 264 (426)
T PRK00062 187 VEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGF-RVAL-GGAQGYYGVTPDLTTLG 264 (426)
T ss_pred HHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhcc-ccCC-ccHHHHhCCCcchHhhh
Confidence 888887656679999999999999999999999999999999999999999999999 8987 77888899999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 265 K~l~~G~p~ga~~~~~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 344 (426)
T PRK00062 265 KIIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKAGI 344 (426)
T ss_pred hHhhCCCcceeeeEHHHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999987631 347778899999988754
Q ss_pred ------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+|+++++.++ ...+..+++.|+++||++.+.+ .+.+++ ++++|++|||+++++|++
T Consensus 345 ~~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~--~~~~~~--~~~~t~~ei~~~~~~l~~ 420 (426)
T PRK00062 345 PLTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQ--FEAGFV--SAAHTDEDIEKTLEAARK 420 (426)
T ss_pred ceEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCC--cCceee--eccCCHHHHHHHHHHHHH
Confidence 688999988622 1235689999999999998754 245565 689999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++.+
T Consensus 421 ~l~~~ 425 (426)
T PRK00062 421 AFAAL 425 (426)
T ss_pred HHHhh
Confidence 98764
No 74
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.9e-42 Score=317.45 Aligned_cols=241 Identities=27% Similarity=0.449 Sum_probs=198.0
Q ss_pred CcHHHHHHHHHHHc------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHH
Q psy11784 1 SEANDLALQLARAY------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQA 72 (284)
Q Consensus 1 seA~e~AlklAr~~------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (284)
|||||+|+|+||.| ++|++||+++++|||++.++.+.+....... ......+.++| +++
T Consensus 98 seA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d----- 164 (389)
T PRK01278 98 AEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVP--------FGD----- 164 (389)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeC--------CCC-----
Confidence 68999999999998 6788999999999999999887765321110 01111111122 232
Q ss_pred HHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 73 AQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 73 ~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+.+++.+. +++++||+||+++.+|+.++|++|+++|+++|++||++||+||||+||||+|+ +++++++++.
T Consensus 165 ----~~~l~~~l~---~~~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~~~ 236 (389)
T PRK01278 165 ----IEALKAAIT---PNTAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGK-LFAHEWAGVT 236 (389)
T ss_pred ----HHHHHHhhC---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCc-ceeecccCCC
Confidence 577787775 47999999999999999999999999999999999999999999999999998 7788888999
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
||++++||++++|+|+|++++++++++.+.. .+++++++++++++|+++
T Consensus 237 pdi~t~sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~~ 316 (389)
T PRK01278 237 PDIMAVAKGIGGGFPLGACLATEEAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLVD 316 (389)
T ss_pred CCEEEEehhccCCcceEEEEEcHHHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999887643 235777888888888764
Q ss_pred -----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|+++++++. .....+++.|+++||++.|++ .+++||.||+++|+++|++++++|++++++
T Consensus 317 ~~~~~~~~v~g~G~~~~i~~~---~~~~~~~~~l~~~GV~~~p~~--~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 317 RFPDVIEEVRGKGLLLGLKCV---VPNRDLVQALRDEGLLTVGAG--DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred hCCCceeeEecccEEEEEEEe---cCHHHHHHHHHHCCeEEeecC--CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 3566777663 246789999999999998754 589999999999999999999999998865
No 75
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=100.00 E-value=5.9e-42 Score=318.13 Aligned_cols=245 Identities=22% Similarity=0.384 Sum_probs=201.4
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||||+|+|+||.| ++|++|++++++|||++.+.+++++...... .... |.....+|++
T Consensus 104 s~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~d--- 172 (401)
T TIGR01885 104 AEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYV--------PGFKKIPYNN--- 172 (401)
T ss_pred HHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCC--------CCceEeCCCC---
Confidence 58999999999997 3688999999999999998888764321110 1111 1122233443
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.++++++++..++++++||+||+++++|.+.++++||++|+++|++||+++|+||||+||||+|+ +++.++++
T Consensus 173 ------~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~-~~~~~~~~ 245 (401)
T TIGR01885 173 ------LEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGK-LLCVDHEN 245 (401)
T ss_pred ------HHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch-hhHHhhcC
Confidence 67888888765567999999999999999999999999999999999999999999999999997 77778889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++| +|+|++++++++++.+.. .++++++++++++.|++
T Consensus 246 ~~~di~~~gK~l~~g~~~ig~v~~~~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~~l~~~~~~~~~~~~~~L~~ 325 (401)
T TIGR01885 246 VKPDIVLLGKALSGGVYPVSAVLADDDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEEKLAENAEKLGEIFRDQLKK 325 (401)
T ss_pred CCCCEEEeeccccCCCCCcEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHh
Confidence 999999999999987 799999999999887643 23677888999999987
Q ss_pred c----------cCceeEEEEeccc--HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSIT--YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|+|+++.+.... ..+.++++.|.++||++.+.+ .+++||.||+++|+++|++++++|++++
T Consensus 326 l~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~--~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 326 LPKPIITEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPTH--GNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ccCCceeEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEecC--CCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 5 5777777774221 257889999999999998753 5899999999999999999999998876
No 76
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=100.00 E-value=2.5e-42 Score=322.71 Aligned_cols=253 Identities=26% Similarity=0.337 Sum_probs=198.5
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc-CCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS-SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||+|+|+|+||.|+||++||+|+++|||++.++.+.+....... ..........+.++.++.++++ .++
T Consensus 114 seA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~~ 184 (423)
T TIGR00713 114 TEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYND---------LEA 184 (423)
T ss_pred HHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCC---------HHH
Confidence 699999999999999999999999999999887776543211000 0000000001123334444543 678
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+..+.+++++||+||+++++|.++++++|+++|+++|++||++||+||||+|| |+|. +++++++++.||++|||
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~-r~g~-~~~~~~~~~~pDi~t~s 262 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVAL-GGAQEYFGVEPDLTTLG 262 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccc-ccCc-chhHHHhCCCcchhhhh
Confidence 888887555679999999999999999888999999999999999999999999999 9987 67888899999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 263 K~l~~G~pig~v~~~~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 342 (423)
T TIGR00713 263 KIIGGGLPVGAFGGRREIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDTGI 342 (423)
T ss_pred hhhcCCCceeeeeEHHHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999999887741 346778888888887653
Q ss_pred ------cCceeEEEEecc------------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI------------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~~------------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+|+++++..+ ......+++.|+++||++.+.+ .+.+|++|+ +|+++|++++++|++
T Consensus 343 ~~~v~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~--~~~~~l~~~--~t~~~i~~~~~~l~~ 418 (423)
T TIGR00713 343 PHTVNRVGSMFSLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ--FEACFLSAA--HTEEDIENTIEAAEE 418 (423)
T ss_pred CeEEEeeccEEEEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC--ccceeeECC--CCHHHHHHHHHHHHH
Confidence 578888877521 1234578889999999987543 256889887 799999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 419 ~l~~~ 423 (423)
T TIGR00713 419 VFAEL 423 (423)
T ss_pred HHhhC
Confidence 98753
No 77
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.8e-41 Score=313.26 Aligned_cols=242 Identities=27% Similarity=0.451 Sum_probs=201.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
+||++.|+|++|. +||.+|+.++++|||++.+++++++...... ......+.++| +++ .+
T Consensus 113 sea~~~al~~~~~-~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~d---------~~ 174 (398)
T PRK03244 113 AEANEAAFKLARL-TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVP--------YGD---------VD 174 (398)
T ss_pred HHHHHHHHHHHHH-HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeC--------CCC---------HH
Confidence 5899999999999 5899999999999999998887764321110 11111112222 222 56
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
.+++.+. +++++||+||+++++|.++++++|+++|+++|++||++||+||||+||||+|+ +++++++++.||++||
T Consensus 175 ~l~~~~~---~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~~~pDi~t~ 250 (398)
T PRK03244 175 ALAAAVD---DDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGA-WFAHQHDGVTPDVVTL 250 (398)
T ss_pred HHHHhhc---CCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccch-HHhhhhhCCCCCEEEE
Confidence 7777664 46999999999999999999999999999999999999999999999999998 7788889999999999
Q ss_pred cccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-------- 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-------- 201 (284)
||++++|+|+|++++++++++.+.. .+++++++++|++.|+++
T Consensus 251 sK~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~v 330 (398)
T PRK03244 251 AKGLGGGLPIGACLAFGPAADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRAGIEALGHPLVDHV 330 (398)
T ss_pred chhhhCCcccEEEEEcHHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHhcCCCceeeE
Confidence 9999999999999999999887653 347888999999999874
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++++. . ..+..+.+.|+++||++.+.+ .+.|||+||+.+|++||++++++|+++++++
T Consensus 331 ~g~g~~~~i~~~-~-~~~~~~~~~l~~~Gv~~~~~~--~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 331 RGRGLLLGIVLT-A-PVAKAVEAAAREAGFLVNAVA--PDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred eeccEEEEEEEe-c-cHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 4778888884 2 256789999999999998743 5899999999999999999999999999765
No 78
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=6.2e-41 Score=308.78 Aligned_cols=240 Identities=27% Similarity=0.487 Sum_probs=196.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccC-CCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPF-PDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+||||+|+|+||.++||.+|++++++|||++.+.+++++..... .+. .|. ++....++++ .++
T Consensus 96 ~~a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~d---------~~~ 159 (377)
T PRK02936 96 AEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIK-EGF------GPLLPGFTHVPFND---------IKA 159 (377)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCcccc-ccC------CCCCCCceEeCCCC---------HHH
Confidence 68999999999999999999999999999998888776432111 000 010 1112223332 567
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+. +++++||+||+++++|.++++++||++|+++|++||+++|+||||+||||+|+ +++++++++.||++++|
T Consensus 160 l~~~~~---~~~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~-~~~~~~~~~~~di~t~s 235 (377)
T PRK02936 160 LKEVMN---EEVAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGT-LFAYEQFGLDPDIVTVA 235 (377)
T ss_pred HHHhcc---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhhCCCCcEEEEc
Confidence 777664 45999999999999999999999999999999999999999999999999997 67778889999999999
Q ss_pred ccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc---------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN--------- 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~--------- 201 (284)
|++++|+|+|++++++++++.+.. +++++++++++++.|++.
T Consensus 236 K~l~~G~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 315 (377)
T PRK02936 236 KGLGNGIPVGAMIGKKELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEELEHLECVKN 315 (377)
T ss_pred ccccCCCccEEEEEcHHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCcEEe
Confidence 999999999999999999887643 347778888888888763
Q ss_pred ---cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ---LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ---~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|+++++++. . ....+.+.|+++||++.+.+ .+++||+||+.+|++++++++++|++++
T Consensus 316 v~~~g~~~~i~~~-~--~~~~~~~~l~~~gv~v~~~g--~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 316 IRGKGLMIGIECT-E--EVAPVIEQLREEGLLVLSAG--PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EeecceEEEEEec-c--hHHHHHHHHHHCCeEEecCC--CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 4667777774 2 26678889999999998743 4799999999999999999999998753
No 79
>KOG1405|consensus
Probab=100.00 E-value=1.3e-40 Score=289.28 Aligned_cols=261 Identities=19% Similarity=0.299 Sum_probs=205.7
Q ss_pred CcHHHHHHHHHHHcc--------------------------CCccEEEEcCCCcccchhhhcCCCCcccccCCCC--Cce
Q psy11784 1 SEANDLALQLARAYT--------------------------GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKK--PWV 52 (284)
Q Consensus 1 seA~e~AlklAr~~~--------------------------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~--~~~ 52 (284)
|+|||.|+|.|..|. ..-.|++|.|+|||+++++++.+.++....-.++ +|.
T Consensus 150 s~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpIHKldiPaFdWP 229 (484)
T KOG1405|consen 150 SCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPIHKLDIPAFDWP 229 (484)
T ss_pred ccccHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHhcCCCCCCceeeeeeccccccccccccccccCccccccCCCCCCCC
Confidence 689999999998763 1345999999999999999999877655432222 222
Q ss_pred EEccCCCCcCCCCCCC---chHHHHHHHHHHHHHHHhcC---CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCE
Q psy11784 53 HVIPFPDTYRGEFSAD---DPQAAQKYAQAARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGV 126 (284)
Q Consensus 53 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~i~~~~---~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~l 126 (284)
..++|. |+++..++ +....+.|++++|++|..+. ..|||+||||||++||+...+++|++.|+++|++||+.
T Consensus 230 -iA~fP~-ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~ 307 (484)
T KOG1405|consen 230 -IAPFPR-YKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVA 307 (484)
T ss_pred -CCCCcc-ccCChhhhhhhhhhhhhhHHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeE
Confidence 134442 34443322 23456788999999998544 35999999999999999999999999999999999999
Q ss_pred EEEecccccCccccCccccccccCC--CCcEEEeccccc-CCcceeEEEecHHHHHhchh--------------------
Q psy11784 127 VIADEIQCGMGRSGSHFWAFQTQGA--VPDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------- 183 (284)
Q Consensus 127 lI~DEv~tG~gr~G~~~~a~~~~g~--~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------- 183 (284)
+|+||||||-|-||+ +|+++++++ .||+|||||-+- |||--.--.-..+-+..+..
T Consensus 308 fivDEVQTGgGaTGk-~WaHehw~l~~PpD~vTFSKK~q~gGffh~~~frpn~pYrifNTWmGdP~k~lll~~vv~~I~~ 386 (484)
T KOG1405|consen 308 FIVDEVQTGGGATGK-FWAHEHWNLDSPPDVVTFSKKFQTGGFFHDEEFRPNEPYRIFNTWMGDPSKNLLLEEVVQEIKR 386 (484)
T ss_pred EEeeeeecCCCccCc-eeeehhcCCCCCccceehhhhhhcCccccCcccCCCchHHHhhhhcCChHHHHHHHHHHHHHhH
Confidence 999999999999998 999999987 589999999986 44321111111111222111
Q ss_pred ---hhhHHHHHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCC
Q psy11784 184 ---LDDNRPSGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAM 247 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l 247 (284)
++++...|++|..+|.++ +|.++++++ ++.....+++..++-+|+.+..|+ ...|||+|++
T Consensus 387 ~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~-ps~~~Rdk~i~~~~~nGv~~GGCg--~~siRfRPsL 463 (484)
T KOG1405|consen 387 EDLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDC-PSGSIRDKLILIARLNGVNLGGCG--DKSIRFRPSL 463 (484)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeC-CChHHHHHHHHHHHHcCceecccc--cceeeeccce
Confidence 568899999999999888 788999998 677788899999999999998655 5789999999
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy11784 248 CLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~ 267 (284)
+.++.+.+.++++|+++++.
T Consensus 464 vf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 464 VFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred eehhhhHHHHHHHHHHHhcc
Confidence 99999999999999998864
No 80
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=1.8e-39 Score=301.46 Aligned_cols=243 Identities=21% Similarity=0.412 Sum_probs=198.1
Q ss_pred CcHHHHHHHHHHHc--------cCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAY--------TGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~--------~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||||+|+|+||.| +||.+||+|.++|||++.++.+++....... ......+.++ ++++
T Consensus 108 s~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~d--- 176 (401)
T PRK00854 108 AEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVV--------PFGD--- 176 (401)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEe--------CCCC---
Confidence 68999999999998 3678999999999999988776654321110 1111112222 3333
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
.+.+++.+. +++++||+||+++++|.+.++++||++|+++|++||++||+||||+||||+|+ +++.++++
T Consensus 177 ------~~~le~~i~---~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~-~~~~~~~g 246 (401)
T PRK00854 177 ------AEALEAAIT---PNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGK-LLAEEHEG 246 (401)
T ss_pred ------HHHHHHHhC---CCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCch-HhHHhhcC
Confidence 577777774 46899999999999999999999999999999999999999999999999997 67777889
Q ss_pred CCCcEEEecccccCC-cceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++| +|+|++++++++++.+.. .++++++++++.+.|++
T Consensus 247 ~~~D~~~~~K~l~gg~~~ig~v~~~~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~~~l~~~L~~ 326 (401)
T PRK00854 247 IEADVTLIGKALSGGFYPVSAVLSNSEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMGAYFLEGLRS 326 (401)
T ss_pred CCCCEEEecccccCCccCeEEEEEcHHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHh
Confidence 999999999999998 699999999999887653 34677888999998877
Q ss_pred c----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ .|+|+.+.+.+.......+++.|+++||++.+. ..+++||+||+.+|+++|++++++|++++.
T Consensus 327 ~~~~~~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~--~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 327 IRSNIVREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDT--HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred hccCceEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecC--CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 4 477778777543345678999999999999753 357999999999999999999999998763
No 81
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.5e-39 Score=298.08 Aligned_cols=240 Identities=26% Similarity=0.444 Sum_probs=194.7
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
||||++|+|+||.+++|.+|+++.++|||++..+++.++..... ...... .+.....++++ ++.+
T Consensus 94 seA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~d---------l~~l 158 (375)
T PRK04260 94 AEANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIK-DGFGDG-----VPHFSYAIFND---------LNSV 158 (375)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccC-CCCCCC-----CCCeEEeCCCC---------HHHH
Confidence 59999999999999999999999999999998888776432211 010000 00000011232 6777
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecc
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGK 160 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK 160 (284)
++.+. +++++|++||+++++|.++++++||++++++|++||+++|+||+|+||||+|. +++++.+++.||++||||
T Consensus 159 ~~~l~---~~~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~-~~~~~~~~~~pdi~t~sK 234 (375)
T PRK04260 159 KALVN---KNTAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGK-LYAFEHYGIEPDIFTLAK 234 (375)
T ss_pred HHhcC---CCeEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhHhhCCCCCEEEecc
Confidence 77664 46899999999999999999999999999999999999999999999999997 678778899999999999
Q ss_pred cccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc----------
Q psy11784 161 PMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN---------- 201 (284)
Q Consensus 161 ~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~---------- 201 (284)
++++|+|+|++++++++++.+.. +++++++++++++.|.++
T Consensus 235 ~l~~G~~ig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 314 (375)
T PRK04260 235 GLANGVPVGAMLAKSSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV 314 (375)
T ss_pred cccCCcceEEEEEcHHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE
Confidence 99999999999999999887643 346777788888877664
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|+++++++. .....+.+.|+++||++.+.+ .+.+|+.||+.+|++|+++++++|+++
T Consensus 315 ~~~g~~~~~~~~---~~~~~~~~~l~~~Gi~v~~~~--~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 315 RGLGYMIGIETT---ADLSQLVEAARDKGLIVLTAG--TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred eccceEEEEEec---CcHHHHHHHHHhCCCEEecCC--CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 4778888873 235689999999999998653 478999999999999999999999875
No 82
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=100.00 E-value=6.8e-39 Score=297.37 Aligned_cols=247 Identities=21% Similarity=0.407 Sum_probs=199.9
Q ss_pred CcHHHHHHHHHHHcc--------CCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCch
Q psy11784 1 SEANDLALQLARAYT--------GRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDP 70 (284)
Q Consensus 1 seA~e~AlklAr~~~--------~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (284)
|||||+|||++|.++ ++.+||+++++|||++.+.++.+....... ........ ..++++
T Consensus 98 s~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~d--- 166 (400)
T PTZ00125 98 AEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFE--------LVDYND--- 166 (400)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCce--------EeCCCC---
Confidence 689999999999762 467899999999999998887764321110 01111111 122332
Q ss_pred HHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC
Q psy11784 71 QAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 71 ~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
++++++.++ .+++++|++||+++++|.+.++++|+++|+++|++||++||+||||+||||+|+ +++.++++
T Consensus 167 ------~~~le~~l~--~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~-~~~~~~~~ 237 (400)
T PTZ00125 167 ------VEALEKLLQ--DPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGK-LLAHDHEG 237 (400)
T ss_pred ------HHHHHHHhC--CCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhHHHhcC
Confidence 678888885 346999999999999999999999999999999999999999999999999997 67778889
Q ss_pred CCCcEEEecccccCCc-ceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 151 AVPDIITVGKPMGNGM-PIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 151 ~~pDiv~~sK~l~~G~-p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.||++++||++++|+ |+|++++++++++.+.. .++++++++++++.|++
T Consensus 238 ~~pd~~~~sK~l~~g~~~ig~v~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~~~~~~~~~~~l~~~l~~ 317 (400)
T PTZ00125 238 VKPDIVLLGKALSGGLYPISAVLANDDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKLAENAQRLGEVFRDGLKE 317 (400)
T ss_pred CCCCEEEEcccccCCCcCcEEEEEcHHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999985 99999999999887643 23567788888888876
Q ss_pred c------------cCceeEEEEec-ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N------------LHIFWCLILLS-ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~------------~G~~~~i~~~~-~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+ .|+++++++.. +......+++.|+++||++.|. .++++||.|++.++++++++++++|++++++
T Consensus 318 l~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~--~~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 318 LLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPT--HDNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred HHhcCCCeEEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeec--CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 4 47778887742 2345778999999999999874 3589999999999999999999999999988
Q ss_pred Hh
Q psy11784 268 LQ 269 (284)
Q Consensus 268 ~~ 269 (284)
+.
T Consensus 396 ~~ 397 (400)
T PTZ00125 396 FD 397 (400)
T ss_pred Hh
Confidence 74
No 83
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=1.1e-38 Score=298.42 Aligned_cols=238 Identities=21% Similarity=0.309 Sum_probs=181.3
Q ss_pred CcHHHHHHHHHHHccCCccEEEE-cCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVV-DAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~-~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
|||||+|+|+||+||||++|++| .++|||+..+....+... .+.+... . +....++|++ +++
T Consensus 114 seA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~----~~~~~~~--~--~~~~~~~~~d---------~~~ 176 (431)
T PRK06209 114 SDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMS----AGIPASV--S--ALTVTFRYND---------IAS 176 (431)
T ss_pred HHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCC----CCCChhH--h--ccccccCCCC---------HHH
Confidence 69999999999999999999999 789998654433222110 0111000 0 1122334554 688
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++++++++.+++|+||+||++|+ .++++||++|+++|++||++||+|||||||++++ +++.+++|+.||++|+|
T Consensus 177 l~~~l~~~~~~~aavi~Epv~g~----~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~--~g~~~~~gv~PDi~t~g 250 (431)
T PRK06209 177 LEALFEDHPGRIACVILEPATAD----EPQDGFLHEVRRLCHENGALFILDEMITGFRWHM--RGAQKLYGIVPDLSCFG 250 (431)
T ss_pred HHHHHHhCCCCEEEEEEccccCC----CCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCc--chhhHHhCCCcceeeeh
Confidence 88888766667999999999987 7889999999999999999999999999997754 34445689999999999
Q ss_pred ccccCCcceeEEEecHHHHHh--c-----h-----h-------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 160 KPMGNGMPIGAVITSRKIAES--L-----N-----C-------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~--~-----~-----~-------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
|++|||+|+|++++++++++. + . . ++++++++++|++.|+++
T Consensus 251 K~lggG~p~~av~~~~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~ 330 (431)
T PRK06209 251 KALGNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAA 330 (431)
T ss_pred hhhcCCcccEEEEEHHHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999886 2 0 0 347889999999999774
Q ss_pred -----------cCceeEEEEec-----c--cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 -----------LHIFWCLILLS-----I--TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 -----------~G~~~~i~~~~-----~--~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|.++.+.+.. . ......+.+.|+++|+++.+ ++.+..||++|||+++++|++
T Consensus 331 ~~~~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~~ 401 (431)
T PRK06209 331 AEHGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQETIRRGVLMPS---------LVVSYAHGDADIERTIDAVHG 401 (431)
T ss_pred HhCCCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHHHHHCCccccc---------ccccccCCHHHHHHHHHHHHH
Confidence 35666666641 1 12234688899999998732 233567899999999999999
Q ss_pred HHHHHhh
Q psy11784 264 IFTSLQM 270 (284)
Q Consensus 264 ~l~~~~~ 270 (284)
+++++.+
T Consensus 402 ~l~~~~~ 408 (431)
T PRK06209 402 ALGVYRK 408 (431)
T ss_pred HHHHHHH
Confidence 9998853
No 84
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2e-37 Score=286.93 Aligned_cols=242 Identities=27% Similarity=0.438 Sum_probs=196.8
Q ss_pred CcHHHHHHHHHHHccCC-----ccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHH
Q psy11784 1 SEANDLALQLARAYTGR-----QNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAA 73 (284)
Q Consensus 1 seA~e~AlklAr~~~~r-----~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 73 (284)
+||+++|+|+||.++++ .+|+++.++|||.+..+.+.+....... ......+.. .++++
T Consensus 106 ~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~d------ 171 (396)
T PRK02627 106 AEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIY--------VPFND------ 171 (396)
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceE--------eCCCC------
Confidence 58999999999999887 8899999999999988877654321110 011111111 12232
Q ss_pred HHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 74 QKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 74 ~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
++++++.+. +++++|++||+++.+|..+++++++++|+++|++||++||+||+|+||||+|+ +++++.+++.|
T Consensus 172 ---~~~l~~~i~---~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~-~~~~~~~~~~p 244 (396)
T PRK02627 172 ---IEALKAAIT---DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGK-LFAYQHYGIEP 244 (396)
T ss_pred ---HHHHHHhcC---CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCc-eeeehhcCCCC
Confidence 677777773 56999999999999998899999999999999999999999999999999997 67888889999
Q ss_pred cEEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 154 DIITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 154 Div~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|+++|||++++|+|+|++++++++++.+.. +++++++++++++.|+++
T Consensus 245 di~t~sK~~~~G~rig~~~~~~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (396)
T PRK02627 245 DIMTLAKGLGGGVPIGAVLAKEKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEK 324 (396)
T ss_pred CEEEEcchhhCCcccEEEEEcHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999887653 336777788888877664
Q ss_pred ---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++++. ....++++.|+++||++.+.+ .+++|++||+.+|++++++++++|+++++++
T Consensus 325 ~~~~~~~~~~g~~~~i~~~---~~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 325 YPGIKEVRGLGLMIGIELD---RPAAEIVKKALEKGLLINVTG--DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred CCCeeeeccCcEEEEEEec---CcHHHHHHHHHHCCeEEeecC--CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 3667777762 246789999999999999754 4789999999999999999999999988654
No 85
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=5.7e-37 Score=285.25 Aligned_cols=256 Identities=32% Similarity=0.549 Sum_probs=203.4
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCccccc--CCCCCceEEccCCCCcCCCCCCCchHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLS--SEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQ 78 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (284)
|||+++|++++|.++++.+|++++++|||++...++.+....... ......+..+|.+...+. .+.....++
T Consensus 106 sea~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~ 179 (413)
T cd00610 106 TEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRP------PAELADDLE 179 (413)
T ss_pred HHHHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccc------hhhHHHHHH
Confidence 589999999999999999999999999999988887764321111 111112223343321110 011223367
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV 158 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~ 158 (284)
.|++.++.+++.+++|++||+++++|...++++|+++|+++|++||+++|+||+|+||||+|. +++++++++.||++++
T Consensus 180 ~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~-~~~~~~~~~~~d~~t~ 258 (413)
T cd00610 180 ALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGK-MFAFEHFGVEPDIVTL 258 (413)
T ss_pred HHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcc-hhhHhhcCCCCCeEEE
Confidence 888888755557999999999999999999999999999999999999999999999999997 6778888999999999
Q ss_pred cccccCCcceeEEEecHHHHHhc--hh-----------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 159 GKPMGNGMPIGAVITSRKIAESL--NC-----------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 159 sK~l~~G~p~gav~~~~~i~~~~--~~-----------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
||++++|+|+|++++++++++.+ .. .++++++++++++.|+++
T Consensus 259 sK~l~~g~~~g~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 338 (413)
T cd00610 259 GKGLGGGLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAEKHPL 338 (413)
T ss_pred cccccCccccEEEEEcHHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhhCCc
Confidence 99999999999999999999875 21 236777888888888764
Q ss_pred ------cCceeEEEEecc-------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSI-------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ------~G~~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+.+. ......+++.|+++||++.+++ ++.+|+.|++.+|+++|++++++|++++
T Consensus 339 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~--~~~lR~~~~~~~t~~~i~~~~~~l~~~l 413 (413)
T cd00610 339 VGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG--GNVIRLLPPLIITEEEIDEGLDALDEAL 413 (413)
T ss_pred EEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC--CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 466777777422 1456789999999999999864 5899999999999999999999998763
No 86
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.98 E-value=1.1e-30 Score=240.52 Aligned_cols=239 Identities=28% Similarity=0.488 Sum_probs=187.1
Q ss_pred CcHHHHHHHHHHHccC-----CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccC-CCCcCCCCCCCchHHHH
Q psy11784 1 SEANDLALQLARAYTG-----RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPF-PDTYRGEFSADDPQAAQ 74 (284)
Q Consensus 1 seA~e~AlklAr~~~~-----r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 74 (284)
+||++.|++++|.+++ +.+|+++..+|||.+..+...+........ ..|. ++....++++
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~d------- 159 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKG-------FEPLVPGFSYAPYND------- 159 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhcc-------CCCCCCCceeeCCCC-------
Confidence 5899999999998876 689999999999998877655432211000 0010 1111112232
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 75 KYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.+. +.+++|++||+++++|..+++.+++++|.++|++||+++|+||+|+|||++|. ++.....++.||
T Consensus 160 --~~~l~~~~~---~~~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~-~~~~~~~~~~~d 233 (379)
T TIGR00707 160 --IESLKKAID---DETAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGK-FFAYEHYGIEPD 233 (379)
T ss_pred --HHHHHHHhh---hCeeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hhhHHhcCCCCC
Confidence 567777775 35789999999999998888999999999999999999999999999999886 556666788999
Q ss_pred EEEecccccCCcceeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 155 IITVGKPMGNGMPIGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 155 iv~~sK~l~~G~p~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
++++||++++|+|+|++++++++++.+.. .+++++++++++++|+++
T Consensus 234 ~~t~sK~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (379)
T TIGR00707 234 IITLAKGLGGGVPIGATLAKEEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGKNY 313 (379)
T ss_pred EEEEcccccCCcccEEEEEcHHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999887653 236667778888877764
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+. . ....+.+.|+++||++.+.+ .+.+|++|++++|++++++++++|+++
T Consensus 314 ~~~~~~~~g~~~~~~~~-~--~~~~~~~~l~~~Gv~v~~~~--~~~lRi~~~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 314 PNKEVRGKGLMLGIELE-A--PCKDIVKKALEKGLLVNCAG--PKVLRFLPPLIITKEEIDEAVSALEEA 378 (379)
T ss_pred CCCccccCceEEEEEec-C--cHHHHHHHHHHCCcEEeeCC--CCEEEEECCCcCCHHHHHHHHHHHHHh
Confidence 3456666663 2 25788999999999999753 479999999999999999999999875
No 87
>PRK07505 hypothetical protein; Provisional
Probab=99.94 E-value=1e-24 Score=202.74 Aligned_cols=231 Identities=15% Similarity=0.160 Sum_probs=158.4
Q ss_pred CcHHHHHHHHHHHc--c-CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHH
Q psy11784 1 SEANDLALQLARAY--T-GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYA 77 (284)
Q Consensus 1 seA~e~AlklAr~~--~-~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (284)
+||++.|+|+++.. + +|.++|++.++|||........ .. . . ..+..+|.+ + .
T Consensus 115 ~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~-----~~-~-~-~~v~~~~~~--------d---------~ 169 (402)
T PRK07505 115 SAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGI-----CA-D-E-TEVETIDHN--------D---------L 169 (402)
T ss_pred HHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhh-----hh-c-C-CeEEEeCCC--------C---------H
Confidence 58999999998753 4 6788999999999843211111 00 0 0 112233332 2 5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccc--ccCccccCccccccccCC-CCc
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQ--CGMGRSGSHFWAFQTQGA-VPD 154 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~--tG~gr~G~~~~a~~~~g~-~pD 154 (284)
+.+++.+.. ...+++|+||++++|+. .+ +++|+++|++||++||+||+| +||||+|. +++.++++. .||
T Consensus 170 ~~l~~~~~~--~~~~~vl~~p~~~~G~~-~~----~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~-~~~~~~~~~~~~d 241 (402)
T PRK07505 170 DALEDICKT--NKTVAYVADGVYSMGGI-AP----VKELLRLQEKYGLFLYIDDAHGLSIYGKNGE-GYVRSELDYRLNE 241 (402)
T ss_pred HHHHHHHhc--CCCEEEEEecccccCCc-CC----HHHHHHHHHHcCCEEEEECcccccCcCCCCC-chHHHHcCCCCCC
Confidence 677777752 34789999999988554 44 899999999999999999998 67899997 667778887 788
Q ss_pred EE----EecccccCCcceeEEEe-cHHHHHhchh----------------------hh-----hHHHHHHHHHHHHHhc-
Q psy11784 155 II----TVGKPMGNGMPIGAVIT-SRKIAESLNC----------------------LD-----DNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 155 iv----~~sK~l~~G~p~gav~~-~~~i~~~~~~----------------------l~-----~~~~~~~~l~~~L~~~- 201 (284)
.+ ++||+++++ .|+++. ++++.+.+.. ++ .+.++.+++++.++.+
T Consensus 242 ~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~ 319 (402)
T PRK07505 242 RTIIAASLGKAFGAS--GGVIMLGDAEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFD 319 (402)
T ss_pred CeEEEEechhhhhcc--CeEEEeCCHHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHH
Confidence 54 799999853 255554 6777665432 11 1223344444444322
Q ss_pred ---------cCcee-EEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ---------LHIFW-CLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ---------~G~~~-~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.++++ .+.+ +....+.++.+.|+++||++.+... ..++|||+|++.+|++|+++++++|+++++
T Consensus 320 ~~~~~~~~g~~~~i~~~~~-~~~~~~~~~~~~l~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 320 SLIPTEQSGSFLPIRLIYI-GDEDTAIKAAKQLLDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred HHHHhcCCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 23333 2222 2223567899999999999987521 236899999999999999999999998875
Q ss_pred H
Q psy11784 267 S 267 (284)
Q Consensus 267 ~ 267 (284)
+
T Consensus 399 ~ 399 (402)
T PRK07505 399 E 399 (402)
T ss_pred h
Confidence 4
No 88
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.93 E-value=1.5e-24 Score=201.80 Aligned_cols=229 Identities=17% Similarity=0.231 Sum_probs=168.3
Q ss_pred CcHHHHHHH-HHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 1 SEANDLALQ-LARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 1 seA~e~Alk-lAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
++||++|++ +++.+++ .+|.+...|||.+......++.. ...+| +++ .+.
T Consensus 115 ~~An~~ai~~l~~~~~g--~~I~~~~~~H~s~~~~~~~~g~~----------~~~~~--------~~d---------~~~ 165 (406)
T PRK13393 115 YVSNWAALSTLGSRLPG--CVILSDELNHASMIEGIRHSRAE----------KRIFR--------HND---------PAD 165 (406)
T ss_pred HHHHHHHHHHhhcCCCC--CEEEEccchhHHHHHHHHHcCCe----------EEEeC--------CCC---------HHH
Confidence 478999999 6776644 57888899999876655433211 11222 222 456
Q ss_pred HHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCCC--Cc
Q psy11784 80 ARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGAV--PD 154 (284)
Q Consensus 80 l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~~--pD 154 (284)
+++.++... +.+++|++|++++++|.+.+ +++|.++|++||+++|+||+|+ |+ |++|. ++ .++.++. +|
T Consensus 166 l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~G~-g~-~~~~~~~~~~~ 239 (406)
T PRK13393 166 LERKLSDLDPHRPKLVAFESVYSMDGDIAP----IAEICDVAEKHGAMTYLDEVHAVGLYGPRGG-GI-AEREGLADRLT 239 (406)
T ss_pred HHHHHHhccCCCCEEEEEcCCCCCCCchhC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-ch-hhhcCCCCCCe
Confidence 677776432 35789999999999999988 9999999999999999999998 76 88886 44 3666665 57
Q ss_pred EE--EecccccC-CcceeEEEecHHHHHhchh----------------------h----------hhHHHHHHHHHHHHH
Q psy11784 155 II--TVGKPMGN-GMPIGAVITSRKIAESLNC----------------------L----------DDNRPSGKYLVRPLG 199 (284)
Q Consensus 155 iv--~~sK~l~~-G~p~gav~~~~~i~~~~~~----------------------l----------~~~~~~~~~l~~~L~ 199 (284)
++ +|||+++. | |++++++++++.+.. + ++++++++++++.|+
T Consensus 240 i~~~tlsKa~g~~G---G~~~~~~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~ 316 (406)
T PRK13393 240 IIEGTLAKAFGVMG---GYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLD 316 (406)
T ss_pred EEEEeCchhhcccC---ceeeCCHHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 77 99999984 3 677778777665432 1 234567788888887
Q ss_pred hc-------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecC----C-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 200 IN-------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEG----E-YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 200 ~~-------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~----~-~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++ .|.++.+.+ ++...+..+.+.|++ +||++.+.. + +.+++|++|++.+|++|+|+++++|+++++
T Consensus 317 ~~g~~~~~~~~~i~~v~~-~~~~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~ 395 (406)
T PRK13393 317 KAGIPHLPNPSHIVPVMV-GDPVLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWA 395 (406)
T ss_pred HcCCCcCCCCCCeEEEEe-CCHHHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHH
Confidence 64 455666654 333456789999987 599998642 1 237899999999999999999999999887
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
++
T Consensus 396 ~~ 397 (406)
T PRK13393 396 RL 397 (406)
T ss_pred hc
Confidence 64
No 89
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=1.5e-23 Score=198.53 Aligned_cols=223 Identities=20% Similarity=0.246 Sum_probs=162.6
Q ss_pred HHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHHHHHHhc---
Q psy11784 11 ARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAH--- 87 (284)
Q Consensus 11 Ar~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--- 87 (284)
.+.+++|..++.+...||+.+.....+++.. +.+++ +++ .++++..+++.
T Consensus 186 i~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~----------~~~~~--------~nd---------~~~l~~~l~~~~~~ 238 (481)
T PLN02822 186 IPAFCKKGDIIVADEGVHWGIQNGLYLSRST----------IVYFK--------HND---------MESLRNTLEKLTAE 238 (481)
T ss_pred HHHhCCCCCEEEEeCCccHHHHHHHHHcCCe----------EEEEC--------CCC---------HHHHHHHHHHHhhh
Confidence 3466788888888899998775544443211 11222 332 23344444311
Q ss_pred ---CCCe-eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc--cCccccCccccccccCC---CCcEEE-
Q psy11784 88 ---RDNI-ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC--GMGRSGSHFWAFQTQGA---VPDIIT- 157 (284)
Q Consensus 88 ---~~~v-aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--G~gr~G~~~~a~~~~g~---~pDiv~- 157 (284)
.+.+ ++||+|+++++.|.+.+ |++|+++|++||++||+||+|+ .+|++|. +..+++++ .||+++
T Consensus 239 ~~~~~~~~~~Ivve~i~~~~G~i~~----L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~--G~~e~~~v~~~~~dii~~ 312 (481)
T PLN02822 239 NKRKKKLRRYIVVEAIYQNSGQIAP----LDEIVRLKEKYRFRVLLDESNSFGVLGKSGR--GLSEHFGVPIEKIDIITA 312 (481)
T ss_pred hcccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCC--ChHHHcCCCCCCCeEEEe
Confidence 1234 89999999999999888 9999999999999999999998 4688886 36788888 789987
Q ss_pred -ecccccC-CcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 158 -VGKPMGN-GMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 158 -~sK~l~~-G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
|||+++. | |++++++++++.+.. .++++++++++++.|++.
T Consensus 313 s~sKalg~~G---G~i~g~~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~g 389 (481)
T PLN02822 313 AMGHALATEG---GFCTGSARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIPG 389 (481)
T ss_pred cchhhhhhCC---eEEEcCHHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 7799972 3 788899999887653 236778889999999874
Q ss_pred -------cCceeEEEEec-------ccHHHHHHHHHHH-HCCcEEeecCC--C-----CCEEEEEcCCCCCHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLS-------ITYYLYRYTRRMK-EAKIIVANEGE--Y-----GNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 202 -------~G~~~~i~~~~-------~~~~~~~~~~~l~-~~Gv~~~~~~~--~-----~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.+.++.+.+.. +.....++++.|+ ++||++.+..+ + ...+|++.+..+|++||+++++
T Consensus 390 ~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~ 469 (481)
T PLN02822 390 LSIGSNTLSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASE 469 (481)
T ss_pred cccCCCCCCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHH
Confidence 23344455531 1123568999998 88999997522 1 2469999999999999999999
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
+|++++.++.
T Consensus 470 ~l~~~~~~~~ 479 (481)
T PLN02822 470 SLKRVAASVL 479 (481)
T ss_pred HHHHHHHHHh
Confidence 9999988764
No 90
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.92 E-value=2.9e-23 Score=192.91 Aligned_cols=231 Identities=18% Similarity=0.195 Sum_probs=164.1
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
++||+.|+++++.+. +..++.....||+.+......++.. ....+ +++ .+++
T Consensus 115 ~~an~~ai~~l~~~~-~~~~v~~~~~~h~s~~~~~~~~g~~----------~~~~~--------~~d---------~~~l 166 (402)
T TIGR01821 115 YVANDATLATLAKII-PGCVIFSDELNHASMIEGIRHSGAE----------KFIFR--------HND---------VAHL 166 (402)
T ss_pred HHHHHHHHHHhhCCC-CCCEEEEcchHhHHHHHHHHHcCCe----------EEEEC--------CCC---------HHHH
Confidence 478899999887542 3456666777998765444332211 01111 222 5667
Q ss_pred HHHHHhcCC-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCC--CCcE
Q psy11784 81 RNIMEAHRD-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGA--VPDI 155 (284)
Q Consensus 81 ~~~i~~~~~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~--~pDi 155 (284)
+++++...+ .+++|++|+++++.|.+.+ +++|+++|++||++||+||+|+ | +|+.|. + ..++.++ .||+
T Consensus 167 ~~~l~~~~~~~~~~v~~e~~~~~~G~~~~----l~~i~~l~~~~~~~livDea~~~G~~g~~g~-g-~~~~~~~~~~~di 240 (402)
T TIGR01821 167 EKLLQSVDPNRPKIIAFESVYSMDGDIAP----IEEICDLADKYGALTYLDEVHAVGLYGPRGG-G-IAERDGLMHRIDI 240 (402)
T ss_pred HHHHHhccCCCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEeCcccccccCCCCC-c-cchhccCCCCCeE
Confidence 777764433 4789999999999999887 9999999999999999999998 5 366665 2 2355565 4788
Q ss_pred E--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+ ||||+++. +.|++++++++++.+.. .++.+++++++++.|+++
T Consensus 241 v~~t~sKa~g~--~GG~i~~~~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (402)
T TIGR01821 241 IEGTLAKAFGV--VGGYIAASRKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEAL 318 (402)
T ss_pred EEEechhhhcc--CCceeecCHHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHc
Confidence 7 99999984 12678888888776532 113456777888888764
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+.++.+.+ +....+..+++.|++ +||++.+..+ +.+++|++|++.+|++|+|+++++|+++++++
T Consensus 319 g~~~~~~~~~i~~i~~-~~~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 319 GIPVIPNPSHIVPVII-GDAALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCCcCCCCCCEEEEEe-CCHHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 344555554 333456788899875 5999986421 23689999999999999999999999988764
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.92 E-value=3.4e-23 Score=192.73 Aligned_cols=183 Identities=18% Similarity=0.226 Sum_probs=141.1
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCC--
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGA-- 151 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~-- 151 (284)
.++++++++... +++++|++|+++++.|.+.+ +++|+++|++||++||+||+|+ | ||++|. ++ .++.++
T Consensus 164 ~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~----l~~i~~l~~~~~~~livDEa~~~G~~g~~g~-g~-~~~~~~~~ 237 (407)
T PRK09064 164 VAHLEELLAAADPDRPKLIAFESVYSMDGDIAP----IAEICDLADKYNALTYLDEVHAVGMYGPRGG-GI-AERDGLMD 237 (407)
T ss_pred HHHHHHHHHhccCCCCeEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEECCCcccccCCCCC-Ch-HHhcCCCC
Confidence 577788876433 45889999999999999887 9999999999999999999998 7 588886 43 456665
Q ss_pred CCcEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHH
Q psy11784 152 VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 152 ~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~ 197 (284)
.||++ ||||++|. +.|++++++++++.+.. .++++++++++.+.
T Consensus 238 ~~div~~t~sKa~g~--~GG~~~~~~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~ 315 (407)
T PRK09064 238 RIDIIEGTLAKAFGV--MGGYIAGSAALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAA 315 (407)
T ss_pred CCeEEEEecchhhhc--cCceEecCHHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 57888 99999973 12778888888775432 23566788888888
Q ss_pred HHhc-------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 198 LGIN-------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 198 L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
|+++ .+.++.+.+ ++...+..+.+.|++ +||++.+..+ +.+++|++|++.+|++|++++++.|+++
T Consensus 316 L~~~g~~~~~~~~~iv~i~~-~~~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 316 LDAAGIPVMPNESHIVPVMV-GDPEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred HHHcCCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 8874 233445544 333456789998875 5999986432 2368999999999999999999999999
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 395 ~~~~ 398 (407)
T PRK09064 395 WARL 398 (407)
T ss_pred HHHc
Confidence 8765
No 92
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.92 E-value=2.1e-23 Score=190.11 Aligned_cols=228 Identities=18% Similarity=0.263 Sum_probs=171.6
Q ss_pred CCccEEEEcCCCcccchhhhcCCCCcccc------cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHHHHHHhcC-
Q psy11784 16 GRQNIVVVDAAYHGTVNLLLDISPRAFML------SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHR- 88 (284)
Q Consensus 16 ~r~~il~~~~~yHG~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~- 88 (284)
|+...|.|..||+.+.....++....... +.++.+++. .......++.|++ +++||+++++..
T Consensus 98 g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~r-ls~a~~~~f~HnD---------~~~Le~~l~~~~~ 167 (388)
T COG0156 98 GAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIR-LSRAEVRRFKHND---------LDHLEALLEEARE 167 (388)
T ss_pred CCCcEEEEcccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHH-hCCCcEEEecCCC---------HHHHHHHHHhhhc
Confidence 78899999999999988777665432111 122233333 3344556677876 799999998532
Q ss_pred -C-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCCc---E--EEec
Q psy11784 89 -D-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVPD---I--ITVG 159 (284)
Q Consensus 89 -~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~pD---i--v~~s 159 (284)
. +-..|++|.|++|.|++.| |++|.+||++||++|++||+|+ | +|..|. +..+++|+.|+ | .|||
T Consensus 168 ~~~~~~~IvtegVfSMdGdiAp----L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~Gr--G~~e~~g~~~~~vdi~~gTls 241 (388)
T COG0156 168 NGARRKLIVTEGVFSMDGDIAP----LPELVELAEKYGALLYVDEAHAVGVLGPNGR--GLAEHFGLEPEEVDIIVGTLG 241 (388)
T ss_pred cCCCceEEEEeccccCCCCcCC----HHHHHHHHHHhCcEEEEEccccccccCCCCc--cHHHHhCCCCccceEEEEEch
Confidence 1 3578999999999999999 9999999999999999999997 4 466675 45678888755 3 4899
Q ss_pred ccccC-CcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhccCc--
Q psy11784 160 KPMGN-GMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGINLHI-- 204 (284)
Q Consensus 160 K~l~~-G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~~G~-- 204 (284)
|++|+ | |++.+++.+.+.+.. .++++++..++++.++.. |+
T Consensus 242 KAlGs~G---g~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~-~~~~ 317 (388)
T COG0156 242 KALGSSG---GYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKAL-GLVL 317 (388)
T ss_pred hhhcccC---ceeeCcHHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhc-CCcc
Confidence 99995 6 889999999988766 235666666776555542 22
Q ss_pred ------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 205 ------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 205 ------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
++.+.+ .++..+.++...|+++||++.+..+ +..+||++|+..||++||+.+++.|.++
T Consensus 318 ~~s~s~I~pv~~-gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 318 LPSESPIIPVIL-GDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCCCCeeeeEe-CCHHHHHHHHHHHHHCCeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 223333 5667789999999999999986532 3479999999999999999999998764
No 93
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.91 E-value=3e-23 Score=193.28 Aligned_cols=187 Identities=13% Similarity=0.141 Sum_probs=143.3
Q ss_pred cCCCCCCCchHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc--Ccc
Q psy11784 61 YRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG--MGR 138 (284)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr 138 (284)
++++|++ +++|+++++...++.+.||+|+|++|.|+++| |++|+++|++||++||+||+|+. +|.
T Consensus 229 ~~f~HND---------~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap----L~eL~~L~~~~ga~LiVDEAH~~Gv~G~ 295 (476)
T PLN02955 229 FVYRHCD---------MYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP----MEELSQLRKKYGFLLVIDDAHGTFVCGE 295 (476)
T ss_pred EEeCCCC---------HHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCcEEEEcccccCceecC
Confidence 3456776 89999999866666788999999999999998 99999999999999999999973 355
Q ss_pred ccCccccccccCCCCcE----EEecccccCCcceeEEEecHHHHHhchh----------------------h--------
Q psy11784 139 SGSHFWAFQTQGAVPDI----ITVGKPMGNGMPIGAVITSRKIAESLNC----------------------L-------- 184 (284)
Q Consensus 139 ~G~~~~a~~~~g~~pDi----v~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------l-------- 184 (284)
+|. +..+++|+.||+ .||||++|. ..|++++++++++.+.. +
T Consensus 296 ~G~--G~~e~~g~~~di~ii~~TLsKA~G~--~GGfi~gs~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~ 371 (476)
T PLN02955 296 NGG--GVAEEFNCEADVDLCVGTLSKAAGC--HGGFIACSKKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKW 371 (476)
T ss_pred CCC--cHHHHhCCCCCCcEEEEeCccchhc--cCceeecHHHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHH
Confidence 554 466788988876 689999983 12678999988887764 1
Q ss_pred --hhHHHHHHHHHHHHHhccCc-----eeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHH
Q psy11784 185 --DDNRPSGKYLVRPLGINLHI-----FWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTE 252 (284)
Q Consensus 185 --~~~~~~~~~l~~~L~~~~G~-----~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~ 252 (284)
++++++.++|++. .|+ ++.+.+ ++...+..++++|+++|+++.+..+ +..++|++.+..||++
T Consensus 372 ~r~~L~~n~~~fr~~----~G~~~~sPI~pI~i-g~~~~a~~~~~~L~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~e 446 (476)
T PLN02955 372 RRKAIWERVKEFKAL----SGVDISSPIISLVV-GNQEKALKASRYLLKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTE 446 (476)
T ss_pred HHHHHHHHHHHHHHh----cCCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCceEEEeeCCCCCHH
Confidence 1333333344332 232 333333 5667788999999999999985432 3458999999999999
Q ss_pred HHHHHHHHHHHHHHHHh
Q psy11784 253 NVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 253 ~id~~~~~l~~~l~~~~ 269 (284)
||+.++++|.++.+.+.
T Consensus 447 dId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 447 DVKKLITALSSCLDFDN 463 (476)
T ss_pred HHHHHHHHHHHHHhhhc
Confidence 99999999998877653
No 94
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.90 E-value=2.4e-22 Score=186.11 Aligned_cols=174 Identities=18% Similarity=0.203 Sum_probs=134.9
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc--cCccccCccccccccCCCC----cEEEeccccc
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC--GMGRSGSHFWAFQTQGAVP----DIITVGKPMG 163 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t--G~gr~G~~~~a~~~~g~~p----Div~~sK~l~ 163 (284)
+...|++||+++++|.+++ +++++++|++||++||+||+|+ ++|++|. ++++++|+.| |++++|++-+
T Consensus 138 ~t~~vi~E~v~~~~G~i~~----l~~i~~l~~~~g~~livDe~~~~g~~g~~G~--g~~~~~g~~p~~~~Div~~slsk~ 211 (392)
T PLN03227 138 QRRFLVVEGLYKNTGTLAP----LKELVALKEEFHYRLILDESFSFGTLGKSGR--GSLEHAGLKPMVHAEIVTFSLENA 211 (392)
T ss_pred CcEEEEEcCCcCCCCcccC----HHHHHHHHHHcCCEEEEECcccccccCCCCC--cHHHHcCCCCCCCceEEEeechhh
Confidence 4788999999999999888 9999999999999999999998 4566665 5789999999 9998773322
Q ss_pred CCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc----------
Q psy11784 164 NGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN---------- 201 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~---------- 201 (284)
.|.+.|++++++++++.+.. ++++++++++|++.|++.
T Consensus 212 ~g~~gg~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~rg 291 (392)
T PLN03227 212 FGSVGGMTVGSEEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSSHPYALKLRN 291 (392)
T ss_pred hhccCcEEecCHHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 23344677789888765532 346788999999999752
Q ss_pred --------cCceeEEEEecccH--------HHHHHHHHHHHCCcEEeecCC---------CCCEEEEEcCCCCCHHHHHH
Q psy11784 202 --------LHIFWCLILLSITY--------YLYRYTRRMKEAKIIVANEGE---------YGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~--------~~~~~~~~l~~~Gv~~~~~~~---------~~~~lr~~p~l~~t~~~id~ 256 (284)
.|.++++++.+... ....+++.|+++|+++.+.+. -...||++.+..+|++|||+
T Consensus 292 ~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~eei~~ 371 (392)
T PLN03227 292 RLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTREDIDK 371 (392)
T ss_pred ccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHHHHH
Confidence 14468888842111 235899999999999864221 13567888888889999999
Q ss_pred HHHHHHHHHHHHh
Q psy11784 257 IVSTLNRIFTSLQ 269 (284)
Q Consensus 257 ~~~~l~~~l~~~~ 269 (284)
++++|+++++++.
T Consensus 372 ~~~~l~~~~~~~~ 384 (392)
T PLN03227 372 LLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998874
No 95
>KOG1359|consensus
Probab=99.86 E-value=3e-20 Score=159.08 Aligned_cols=235 Identities=14% Similarity=0.197 Sum_probs=165.4
Q ss_pred HHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc------cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHHH
Q psy11784 9 QLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML------SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARN 82 (284)
Q Consensus 9 klAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 82 (284)
|+|+. ++|...|.+..+|..+....-.+-..+... +.+..+++.. +.|+.+.+ +-+++.
T Consensus 120 kiAqf-h~rED~ilypscfdANag~feail~pedAvfSDeLNhASIIdGirL-----ckry~h~d---------v~~l~~ 184 (417)
T KOG1359|consen 120 KIAQF-HGREDTILYPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRL-----CKRYRHVD---------VFDLEH 184 (417)
T ss_pred HHHHH-hCCCceEEeccccccchHHHHHhcChhhhhhccccccchhhhhhHH-----Hhhhccch---------hHHHHH
Confidence 45554 378888888888888865554432211110 1122222211 11222222 445554
Q ss_pred HHH-hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC--CCcEE-
Q psy11784 83 IME-AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA--VPDII- 156 (284)
Q Consensus 83 ~i~-~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~--~pDiv- 156 (284)
-+. ..+.....|+.|.+++|.|++.| |++|.+|+++||+||.+||.|. || |.+|. +..+.+|+ .+|++
T Consensus 185 ~l~~a~k~r~klv~TDg~FSMDGdiaP----l~ei~~La~kYgaLlfiDecHaTgf~G~tGr--Gt~E~~~vm~~vdiin 258 (417)
T KOG1359|consen 185 CLISACKMRLKLVVTDGVFSMDGDIAP----LEEISQLAKKYGALLFIDECHATGFFGETGR--GTAEEFGVMGDVDIIN 258 (417)
T ss_pred HHHHhhhheEEEEEecceeccCCCccc----HHHHHHHHHhcCcEEEEeecccceeecCCCC--ChHHHhCCCCcceehh
Confidence 443 33345889999999999999999 9999999999999999999996 54 77885 45677885 57776
Q ss_pred -EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhccC
Q psy11784 157 -TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGINLH 203 (284)
Q Consensus 157 -~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~~G 203 (284)
|+||++||. .-|++.+++.+.+.+++ +++.+.+-+++++.+... |
T Consensus 259 sTLgKAlGga-~GGyttgp~~li~llrqr~RpylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~a-G 336 (417)
T KOG1359|consen 259 STLGKALGGA-SGGYTTGPKPLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAA-G 336 (417)
T ss_pred hhhhhhhcCC-CCCCccCChhHHHHHHhcCCceeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc-C
Confidence 899999851 22788889988887765 346677778888887763 3
Q ss_pred cee--------EEEEecccHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 204 IFW--------CLILLSITYYLYRYTRRMKEAKIIVANEG-----EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 204 ~~~--------~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+-+ .+-+ .+.+.+.+++++|+++|+++...+ ++..+||+..+..||++|||+++++|.++.+.
T Consensus 337 ftIsg~~hPI~pv~l-Gda~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~ 412 (417)
T KOG1359|consen 337 FTISGASHPICPVML-GDARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRF 412 (417)
T ss_pred ceecCCCCCccceec-ccHHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHh
Confidence 322 2222 567788999999999999986332 25579999999999999999999999888764
No 96
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.85 E-value=9.5e-20 Score=169.81 Aligned_cols=183 Identities=18% Similarity=0.231 Sum_probs=134.2
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC--
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA-- 151 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~-- 151 (284)
.+.+++.++... +++.+|++|+++++.|.+.+ +++|.++|++||+++|+||+|+ |+ |+.|. ++ .++.++
T Consensus 164 ~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~----l~~i~~l~~~~~~~livDea~~~g~~g~~g~-g~-~~~~~~~~ 237 (410)
T PRK13392 164 LADLEEQLASVDPDRPKLIAFESVYSMDGDIAP----IEAICDLADRYNALTYVDEVHAVGLYGARGG-GI-AERDGLMD 237 (410)
T ss_pred HHHHHHHHHhccCCCCEEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCccccCcCCCCC-ch-hhhccCCC
Confidence 345566665333 45889999999999998887 9999999999999999999998 54 66665 33 344444
Q ss_pred CCcEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHH
Q psy11784 152 VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 152 ~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~ 197 (284)
.+|++ ++||+++. +.|++++++++++.+.. .++++++.+++++.
T Consensus 238 ~~div~~tlsK~~g~--~GG~~~~~~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~ 315 (410)
T PRK13392 238 RIDMIQGTLAKAFGC--LGGYIAASADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAK 315 (410)
T ss_pred CCcEEEEEChHhhhc--ccchhhcCHHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 46776 89999974 22777788888774432 12456777788888
Q ss_pred HHhc-------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 198 LGIN-------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 198 L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
|+++ .+.++.+.+ +......++++.|+ ++||++.+..+ +..++|+++++.+|++|+|+++++|+++
T Consensus 316 L~~~g~~~~~~~~~~~~i~~-~~~~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~ 394 (410)
T PRK13392 316 LNANGIPVMPSPSHIVPVMV-GDPTLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAI 394 (410)
T ss_pred HHHcCCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 8764 222333433 33335678999887 67999986421 2368999999999999999999999988
Q ss_pred HHHH
Q psy11784 265 FTSL 268 (284)
Q Consensus 265 l~~~ 268 (284)
++++
T Consensus 395 ~~~~ 398 (410)
T PRK13392 395 WDRL 398 (410)
T ss_pred HHHc
Confidence 7654
No 97
>PRK07179 hypothetical protein; Provisional
Probab=99.84 E-value=3.9e-19 Score=165.56 Aligned_cols=181 Identities=17% Similarity=0.203 Sum_probs=138.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc--CccccCccccccccCCC--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG--MGRSGSHFWAFQTQGAV-- 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr~G~~~~a~~~~g~~-- 152 (284)
.+++++.++. .+.++|++|+++++.|.+.+ +++|.++|++||++||+||+|+. +|++|. . ....+++.
T Consensus 170 ~~~l~~~l~~--~~~~lV~v~~v~n~tG~i~p----l~~I~~l~~~~~~~livDea~~~g~~g~~g~-g-~~~~~~~~~~ 241 (407)
T PRK07179 170 VDHLRRQIER--HGPGIIVVDSVYSTTGTIAP----LADIVDIAEEFGCVLVVDESHSLGTHGPQGA-G-LVAELGLTSR 241 (407)
T ss_pred HHHHHHHHHh--cCCeEEEECCCCCCCCcccc----HHHHHHHHHHcCCEEEEECcccccCcCCCCC-c-hHHhcCCCCC
Confidence 6778888863 23678999999999999888 99999999999999999999983 355664 2 23456664
Q ss_pred CcEEE--ecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHH
Q psy11784 153 PDIIT--VGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 153 pDiv~--~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L 198 (284)
+|+++ ++|++++ ++|++++++++++.+.. .++++++++++++.|
T Consensus 242 vdi~~~S~sK~~g~--~~G~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L 319 (407)
T PRK07179 242 VHFITASLAKAFAG--RAGIITCPRELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVIESADDRRARLHANARFLREGL 319 (407)
T ss_pred CCEEEeechHhhhc--cCeEEEeCHHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 48764 6899975 58999999888766531 236677788888888
Q ss_pred Hhc------cCceeEEEEecccHHHHHHHHHHHHCCcEEe----ecCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 199 GIN------LHIFWCLILLSITYYLYRYTRRMKEAKIIVA----NEGE-YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 199 ~~~------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~----~~~~-~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+++ .+.++++.+ +.......+.+.|.++||++. |..+ ..+.+||+++..+|++|+++++++|++++++
T Consensus 320 ~~~g~~v~~~~~i~~l~~-~~~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 320 SELGYNIRSESQIIALET-GSERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDE 398 (407)
T ss_pred HHcCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHh
Confidence 875 345666665 333356778889999999843 2211 2479999999999999999999999998876
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
.
T Consensus 399 ~ 399 (407)
T PRK07179 399 V 399 (407)
T ss_pred h
Confidence 4
No 98
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.84 E-value=9.9e-19 Score=161.33 Aligned_cols=182 Identities=15% Similarity=0.214 Sum_probs=131.7
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCC
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~p 153 (284)
.+++++.+.... ..+++|+++++++..|.+.+ +++|.++|++||+++|+||+|+ | ++++|. +...++++.+
T Consensus 149 ~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~----~~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~ 222 (385)
T TIGR01825 149 MDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAP----LPEIVELAERYGAVTYVDDAHGSGVMGEAGR--GTVHHFGLED 222 (385)
T ss_pred HHHHHHHHHhhccCCCeEEEEecCCcCCCCccC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC--ccHhhcCCCc
Confidence 456677666333 35889999999999898776 8999999999999999999996 3 455553 2334455555
Q ss_pred c----EEEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHH
Q psy11784 154 D----IITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 154 D----iv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~ 197 (284)
| +.++||+++. +.|++++++++++.+.. .+++.++++++.+.
T Consensus 223 ~~~i~~~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 300 (385)
T TIGR01825 223 KVDIQVGTLSKAIGV--VGGYAAGHKELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAG 300 (385)
T ss_pred CCcEEEEeccHHhhc--CCCEEecCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 5 3689999963 44788888888765532 22456677778887
Q ss_pred HHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 198 LGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-----EYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 198 L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
|+++ .+.++++.+ +.......+++.|+++||++.+.. .+.+++|++|++.+|++++++++++|++++
T Consensus 301 L~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~ 379 (385)
T TIGR01825 301 LGKLGYDTGGSETPITPVVI-GDEKAAQEFSRRLFDEGIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVG 379 (385)
T ss_pred HHHcCCCCCCCCCCEEEEEE-CCHHHHHHHHHHHHHCCcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHH
Confidence 8764 123444443 222346789999999999985321 123789999999999999999999999988
Q ss_pred HH
Q psy11784 266 TS 267 (284)
Q Consensus 266 ~~ 267 (284)
++
T Consensus 380 ~~ 381 (385)
T TIGR01825 380 KE 381 (385)
T ss_pred HH
Confidence 65
No 99
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.83 E-value=1.1e-18 Score=160.67 Aligned_cols=182 Identities=19% Similarity=0.203 Sum_probs=131.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.++..++..++++++++++..|...+ +++|.++|++||+++|+||+|+ | ++++|..+.........+|
T Consensus 155 ~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~----l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~ 230 (385)
T PRK05958 155 VDALEALLAKWRAGRALIVTESVFSMDGDLAP----LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPD 230 (385)
T ss_pred HHHHHHHHHhccCCCeEEEEEecccCCCCcCC----HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCc
Confidence 56778877643334788999999998887666 9999999999999999999995 3 4555541111111223566
Q ss_pred ---EEEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHH
Q psy11784 155 ---IITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 155 ---iv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~ 199 (284)
+.++||+++. +.|++++++++++.+.. .+++.++++++.+.|+
T Consensus 231 ~i~~~s~sK~~~~--~Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~ 308 (385)
T PRK05958 231 VILVGTLGKALGS--SGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLR 308 (385)
T ss_pred eEEEEechhhccc--CCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 5688999974 33888888887765432 1255566677777777
Q ss_pred hc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 200 IN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 200 ~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++ .|.++.+.+ +......++++.|+++||++.+.+. +.+++|++|+..+|++++++++++|++++
T Consensus 309 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 309 ALGFQLMDSQSAIQPLIV-GDNERALALAAALQEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred HcCCCcCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 63 455666666 3334567899999999999986322 23689999999999999999999998753
No 100
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.80 E-value=1.8e-17 Score=152.57 Aligned_cols=182 Identities=18% Similarity=0.225 Sum_probs=126.7
Q ss_pred HHHHHHHHHhcC---CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCcccccccc--
Q psy11784 77 AQAARNIMEAHR---DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQ-- 149 (284)
Q Consensus 77 ~~~l~~~i~~~~---~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~-- 149 (284)
+++|+++++... +...+|++++++++.|.+.| +++|.++|+++|++|++||+|+ | +|++|. ++. ..+
T Consensus 127 ~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~p----l~eI~~l~~~~~~~livDea~~~G~~g~~g~-g~~-~~~~~ 200 (370)
T PRK05937 127 LDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAP----LEQIIALSKKYHAHLIVDEAHAMGIFGDDGK-GFC-HSLGY 200 (370)
T ss_pred HHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-chH-HhhCC
Confidence 677888887322 23557889999999999998 9999999999999999999998 5 677765 222 122
Q ss_pred -CCCCcEEEecccccC-CcceeEEEecHHHHHhchh----------------------hh-----------hHHHHHHHH
Q psy11784 150 -GAVPDIITVGKPMGN-GMPIGAVITSRKIAESLNC----------------------LD-----------DNRPSGKYL 194 (284)
Q Consensus 150 -g~~pDiv~~sK~l~~-G~p~gav~~~~~i~~~~~~----------------------l~-----------~~~~~~~~l 194 (284)
+..+|+.|+||++|. | +++++.+++.+.+.. ++ ++++..+++
T Consensus 201 ~~~~~~~~tlsK~~g~~G---~~vl~~~~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l 277 (370)
T PRK05937 201 ENFYAVLVTYSKALGSMG---AALLSSSEVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYF 277 (370)
T ss_pred CCCcEEEEechhhhhcCc---eEEEcCHHHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHH
Confidence 233678999999975 4 556666665443321 11 233333444
Q ss_pred HHHHHhc-cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 195 VRPLGIN-LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 195 ~~~L~~~-~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.|... .+....+.+ +. .....+.+.|.++||++.... +..+.+|++++..+|++|||.+++.|+++++++.
T Consensus 278 ~~~l~~~~~~~~~~i~~-~~-~~~~~~~~~L~~~gi~v~~~~~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 278 AQKFSSAAPGCVQPIFL-PG-ISEQELYSKLVETGIRVGVVCFPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred HHhcCCCCCCCEEEEEe-CC-hhHHHHHHHHHHCCeeEEeeCCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 4444321 233344444 22 235678888999999887432 2346899999999999999999999999988763
No 101
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.80 E-value=1e-17 Score=154.97 Aligned_cols=184 Identities=21% Similarity=0.267 Sum_probs=133.0
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~ 151 (284)
.+++++.+... +.++..|++++++++.|.+.+ +++|.++|++||++||+||+|. |+ |..|. ......++
T Consensus 154 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~----l~~i~~la~~~~~~li~De~~~~g~~~~~~~--~~~~~~~~ 227 (393)
T TIGR01822 154 MADLEAQLKEARAAGARHRLIATDGVFSMDGVIAP----LDEICDLADKYDALVMVDECHATGFLGPTGR--GSHELCGV 227 (393)
T ss_pred HHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCC----HHHHHHHHHHcCCEEEEECCccccCcCCCCC--chHHhcCC
Confidence 56777777632 225789999999999998877 9999999999999999999994 43 33443 12233444
Q ss_pred --CCcEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHH
Q psy11784 152 --VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 --~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~ 195 (284)
.+|++ +++|+++| +++|++++++++++.+.. .++++++.+++.
T Consensus 228 ~~~~di~~~s~sK~l~g-~r~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~ 306 (393)
T TIGR01822 228 MGRVDIITGTLGKALGG-ASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFR 306 (393)
T ss_pred CCCCeEEEEEChHHhhC-CCcEEEEeCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 36777 78999974 688999999988875532 124566677777
Q ss_pred HHHHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-----CCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-----EYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 196 ~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-----~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+.|++. .+.++.+.+ ++......+++.|.++||++.... ....++|+++++.+|++||++++++|.+
T Consensus 307 ~~L~~~g~~~~~~~~~~~~i~~-~~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~ 385 (393)
T TIGR01822 307 ERMEAAGFDIKPADHPIIPVML-YDAVLAQRFARRLLEEGIYVTGFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTR 385 (393)
T ss_pred HHHHHcCCCCCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 777753 122334433 233456789999999999987321 1235799999999999999999999998
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 386 ~~~~~ 390 (393)
T TIGR01822 386 IGREL 390 (393)
T ss_pred HHHHh
Confidence 87654
No 102
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.80 E-value=3.5e-17 Score=151.38 Aligned_cols=184 Identities=17% Similarity=0.234 Sum_probs=132.4
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~ 151 (284)
.+++++.++. ...++++|+++++++..|...+ +++|.++|++||++||+||+|+ |+ ++.|. +.....++
T Consensus 158 ~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~----~~~l~~la~~~~~~li~De~~~~g~~~~~~~--~~~~~~~~ 231 (397)
T PRK06939 158 MADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAP----LPEICDLADKYDALVMVDDSHAVGFVGENGR--GTVEHFGV 231 (397)
T ss_pred HHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCC----HHHHHHHHHHhCCEEEEECcccccCcCCCCC--CHHHHcCC
Confidence 4666666653 2225889999999998887555 9999999999999999999995 53 33443 12333454
Q ss_pred --CCcEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHH
Q psy11784 152 --VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 --~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~ 195 (284)
.+|++ ++||+++| .++|++++++++++.+.. .++++++.+++.
T Consensus 232 ~~~~~i~~~S~sK~~~g-~r~G~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~ 310 (397)
T PRK06939 232 MDRVDIITGTLGKALGG-ASGGYTAGRKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFR 310 (397)
T ss_pred CCCCcEEEEECHHHhCc-cCceEEEeCHHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 45777 88999965 488999999888776532 124555666677
Q ss_pred HHHHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 196 RPLGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 196 ~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+.|+++ .+.++.+.+ +......++++.|.++||.+.+... ..+.+|+.+++.++++++++++++|.+
T Consensus 311 ~~L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~ 389 (397)
T PRK06939 311 EGMTAAGFTLGPGEHPIIPVML-GDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEK 389 (397)
T ss_pred HHHHHcCCCcCCCCCCEEEEEE-CCHHHHHHHHHHHHHCCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHH
Confidence 777653 233443333 2333567899999999999875321 236899999999999999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
+++++
T Consensus 390 ~~~~~ 394 (397)
T PRK06939 390 VGKEL 394 (397)
T ss_pred HHHHh
Confidence 88664
No 103
>PLN02483 serine palmitoyltransferase
Probab=99.79 E-value=1.1e-17 Score=158.93 Aligned_cols=170 Identities=16% Similarity=0.224 Sum_probs=128.2
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCC---cEE--Eeccccc
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVP---DII--TVGKPMG 163 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~p---Div--~~sK~l~ 163 (284)
-..|++|++.++.|.+.+ +++|.++|++||++||+||+|+ | +|++|. +..+++++.| |++ +|||+++
T Consensus 241 k~livve~v~s~~G~~~~----l~~I~~la~~~~~~livDEa~s~g~~G~~G~--g~~~~~~v~~~~~dI~~~SfSKs~g 314 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCK----LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGR--GVCELLGVDPADVDIMMGTFTKSFG 314 (489)
T ss_pred eEEEEECCCCCCCCcccC----HHHHHHHHHHcCCEEEEECcCccCccCCCCC--chHHhcCCCcccCcEEEEecchhcc
Confidence 358889999999998887 9999999999999999999997 2 466775 3456667654 666 8999997
Q ss_pred CCcceeEEEecHHHHHhchh----------------------h----------------hhHHHHHHHHHHHHHhc----
Q psy11784 164 NGMPIGAVITSRKIAESLNC----------------------L----------------DDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~~~----------------------l----------------~~~~~~~~~l~~~L~~~---- 201 (284)
. +.|++++++++++.+.. + ++++++.+++++.|+++
T Consensus 315 ~--~GG~i~~~~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G~~v 392 (489)
T PLN02483 315 S--CGGYIAGSKELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMGFEV 392 (489)
T ss_pred c--CceEEEcCHHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence 4 23888889888876643 1 13445566777777764
Q ss_pred c----CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 L----HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 ~----G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
. +.+.++.+ ........+++.|+++||.+.+.++ ..+.+||+++..+|++||++++++|+++++.+.
T Consensus 393 ~~~~~sp~~~l~l-~~~~~~~~~~~~Ll~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 393 LGDNDSPVMPIML-YNPAKIPAFSRECLKQNVAVVVVGFPATPLLLARARICISASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred cCCCCCCEEEEEE-CCHHHHHHHHHHHHHCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 1 22333333 2334566899999999999986432 126899999999999999999999999988764
No 104
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.76 E-value=2e-16 Score=144.13 Aligned_cols=178 Identities=15% Similarity=0.168 Sum_probs=128.4
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc-cccccccCCCCc
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH-FWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~~a~~~~g~~pD 154 (284)
.+.+++.++... .++++|+++++.+..|...+ +++|.++|++||+++|+||+|+ +|..+.. ......+++.||
T Consensus 132 ~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~ 206 (360)
T TIGR00858 132 VEHLERLLEKNRGERRKLIVTDGVFSMDGDIAP----LPQLVALAERYGAWLMVDDAHG-TGVLGEDGRGTLEHFGLKPE 206 (360)
T ss_pred HHHHHHHHHHcccCCCeEEEEeCCccCCCCCcC----HHHHHHHHHHcCcEEEEECccc-ccCcCCCCCchHHhcCCCcc
Confidence 567788776433 34789999999988887766 9999999999999999999997 3333311 112334556555
Q ss_pred -----EEEecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHH
Q psy11784 155 -----IITVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 155 -----iv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~ 197 (284)
+.++||+++. +.|++++++++++.+.. .++++++.+++.+.
T Consensus 207 ~~~i~i~s~sK~~~~--~gG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~ 284 (360)
T TIGR00858 207 PVDIQVGTLSKALGS--YGAYVAGSQALIDYLINRARTLIFSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAG 284 (360)
T ss_pred CCcEEEEechhhhhc--cCcEEEcCHHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 5689999975 33888888887765432 22566667777777
Q ss_pred HHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 198 LGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 198 L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
|+++ .|.++++.+ +......++++.|.++||++.+... ..+.+|++++..+|++|+++++++|+
T Consensus 285 L~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 285 LEALGFTLMPSCTPIVPVII-GDNASALALAEELQQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHcCCccCCCCCCEEEEEe-CCHHHHHHHHHHHHHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 7664 344666665 3333567899999999999975322 23689999999999999999998863
No 105
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.75 E-value=2.2e-16 Score=146.27 Aligned_cols=228 Identities=17% Similarity=0.157 Sum_probs=148.3
Q ss_pred cHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 2 EANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 2 eA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
++.+.+++.++...++...|.+..+|||.+.......+.... ..+..+|.++. + ..+ .++++
T Consensus 92 ~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g------~~~~~v~~~~~--~--~~d--------~~~l~ 153 (398)
T cd00613 92 AAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLG------IEVVEVPSDEG--G--TVD--------LEALK 153 (398)
T ss_pred HHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCC------cEEEEeccCCC--C--CcC--------HHHHH
Confidence 456788888887654455666788899998776655432110 01223333221 0 111 56677
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE--ec
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT--VG 159 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~--~s 159 (284)
+.+. +++++|++++.. ..|.+ .++|++|+++|++||+++|+|++|+.....+. ...+ .+|+++ ++
T Consensus 154 ~~i~---~~t~~viv~~~~-~~G~~---~~~l~~i~~la~~~g~~livD~~~~~~~~~~~----~~~~--~~d~~~~s~~ 220 (398)
T cd00613 154 EEVS---EEVAALMVQYPN-TLGVF---EDLIKEIADIAHSAGALVYVDGDNLNLTGLKP----PGEY--GADIVVGNLQ 220 (398)
T ss_pred HhcC---CCeEEEEEECCC-CCcee---cchHHHHHHHHHhcCCEEEEEeccccccCCCC----hHHc--CCCEEEeecc
Confidence 6663 568999999864 56766 36789999999999999999998863211111 1112 378876 45
Q ss_pred ccc---cC-CcceeEEEecHHHHHhc---------------------h---------h----------------------
Q psy11784 160 KPM---GN-GMPIGAVITSRKIAESL---------------------N---------C---------------------- 183 (284)
Q Consensus 160 K~l---~~-G~p~gav~~~~~i~~~~---------------------~---------~---------------------- 183 (284)
|.+ ++ |...|+++.++++.+.+ . .
T Consensus 221 K~~~p~g~Ggp~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~ 300 (398)
T cd00613 221 KTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVY 300 (398)
T ss_pred ccCCCCCCCCCceeEEEEhhhhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHH
Confidence 665 33 45677888887776653 0 0
Q ss_pred ---------hhhHHHHHHHHHHHHHhcc------Ccee---EEEEecc--cHHHHHHHHHHHHCCcEEeecC-CCCCEEE
Q psy11784 184 ---------LDDNRPSGKYLVRPLGINL------HIFW---CLILLSI--TYYLYRYTRRMKEAKIIVANEG-EYGNVLL 242 (284)
Q Consensus 184 ---------l~~~~~~~~~l~~~L~~~~------G~~~---~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr 242 (284)
.++.++++++++++|+++. +.+. .+.+ +. .....++++.|+++|+++.... ...+.+|
T Consensus 301 ~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~-~~~~~~~~~~~~~~L~~~gi~~~~~~~~~~~~lR 379 (398)
T cd00613 301 LGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRL-PPLYGIRAEDLAKALIDGGFHAPTMYLPVDGTLM 379 (398)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEc-CCcchHHHHHHHHhhhhcCccccccccCCCCeEE
Confidence 2367778888898888751 1111 2222 22 2357789999999999876421 1357999
Q ss_pred EEcCCCCCHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l 261 (284)
++|++.+|++|||++++.|
T Consensus 380 is~~~~~t~edid~~~~~L 398 (398)
T cd00613 380 IEPTETETKEELDALLEAL 398 (398)
T ss_pred EEcCCCCCHHHHHHHHHhC
Confidence 9999999999999998764
No 106
>PRK07682 hypothetical protein; Validated
Probab=99.72 E-value=4.7e-16 Score=143.36 Aligned_cols=185 Identities=14% Similarity=0.126 Sum_probs=128.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pD- 154 (284)
.+++++.+. +++.++++...++..|. .++++.+++|.++|++|++++|+||+|..|...+. +... ...+..+.
T Consensus 144 ~~~l~~~~~---~~~~~v~~~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~ 218 (378)
T PRK07682 144 PAQIEAAIT---AKTKAILLCSPNNPTGA-VLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERT 218 (378)
T ss_pred HHHHHhhcC---cccEEEEEECCCCCcCc-CcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCE
Confidence 566776654 35666655544666665 66899999999999999999999999998755443 2111 11222222
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.+|||.++ .|+++|++++++++++.+.. .++++++.+++.+.|++
T Consensus 219 i~~~S~SK~~~~~GlR~G~~~~~~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 298 (378)
T PRK07682 219 ILISGFSKGFAMTGWRLGFIAAPVYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNE 298 (378)
T ss_pred EEEecCcccccChhhhhhhhhcCHHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 447899998 79999999999998887653 11345556667777765
Q ss_pred c--------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
. .|+++++.+.+......++++.++ ++||.+.|+.. ..+++|++.. .+++++++++++|.+++++
T Consensus 299 ~~~~~~~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 299 IGLTCHVPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYA--TSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred CCCccCCCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeC--CCHHHHHHHHHHHHHHHhh
Confidence 4 234445554322234667888876 68999998643 2478999754 5799999999999998865
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 377 ~ 377 (378)
T PRK07682 377 K 377 (378)
T ss_pred c
Confidence 4
No 107
>KOG1360|consensus
Probab=99.72 E-value=4.8e-16 Score=138.26 Aligned_cols=238 Identities=18% Similarity=0.226 Sum_probs=164.7
Q ss_pred HHHHccCCccEEEEcCCCcccc--hhhhcC--CC----CcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 10 LARAYTGRQNIVVVDAAYHGTV--NLLLDI--SP----RAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 10 lAr~~~~r~~il~~~~~yHG~t--~~~~~~--~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
||-. ++|...+.|..+|-.+- ..+++- .+ +....+.++..++.. +.-..+.+.||+ +++|+
T Consensus 225 LA~L-HqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrn-s~v~K~IFrHND---------~~hL~ 293 (570)
T KOG1360|consen 225 LADL-HQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRN-SRVPKHIFRHND---------LDHLE 293 (570)
T ss_pred HHHH-hcCcceeeeeeeeeccchHHHHHHHHCCCcEEeccccchHHHHHHhhh-cCCcceeeccCC---------HHHHH
Confidence 3433 37889999999999974 333321 10 000111222223321 111233456676 89999
Q ss_pred HHHHhcCCC-eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cC-ccccCccccccccCC--CCcEE
Q psy11784 82 NIMEAHRDN-IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GM-GRSGSHFWAFQTQGA--VPDII 156 (284)
Q Consensus 82 ~~i~~~~~~-vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~-gr~G~~~~a~~~~g~--~pDiv 156 (284)
+++++.+.. ...|-+|.|.+|.|.+.| |++|++++++||++..+||||. |+ |-.|. +.-++.|+ +.||+
T Consensus 294 ~lL~~~~~svPKivAFEtVhSM~Gavcp----leelcDvah~yGAiTFlDEVHAVGlYG~rGa--GvgerdGvm~kvDiI 367 (570)
T KOG1360|consen 294 QLLQSSPKSVPKIVAFETVHSMDGAVCP----LEELCDVAHKYGAITFLDEVHAVGLYGPRGA--GVGERDGVMHKVDII 367 (570)
T ss_pred HHHHhCCCCCCceEEEeeeeccCCCcCC----HHHHHHHHHHhCceeeeehhhhhccccCCCC--CccccCCcchhhhhc
Confidence 999976655 566779999999999999 9999999999999999999998 43 33332 33456676 45776
Q ss_pred --EecccccC-CcceeEEEecHHHHHhchh-------------------hh---------------hHHHHHHHHHHHHH
Q psy11784 157 --TVGKPMGN-GMPIGAVITSRKIAESLNC-------------------LD---------------DNRPSGKYLVRPLG 199 (284)
Q Consensus 157 --~~sK~l~~-G~p~gav~~~~~i~~~~~~-------------------l~---------------~~~~~~~~l~~~L~ 199 (284)
|+||++|. | |++.++..+++.++. ++ .-++.-+++++.|.
T Consensus 368 sGTLgKafGcVG---GYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~ 444 (570)
T KOG1360|consen 368 SGTLGKAFGCVG---GYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLM 444 (570)
T ss_pred ccchhhhccccc---ceehhhhhHHHHHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 79999986 5 889999999998876 11 12233455666666
Q ss_pred hccCce--------eEEEEecccHHHHHHHHHHH-HCCcEEeecC-----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 200 INLHIF--------WCLILLSITYYLYRYTRRMK-EAKIIVANEG-----EYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 200 ~~~G~~--------~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-----~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|+- +.+.+ .+...+.+++..|+ ++|+++...- .+...+|++|.-.||++-++.+++.+..++
T Consensus 445 ~-~GiPVi~~pSHIiPv~v-gda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw 522 (570)
T KOG1360|consen 445 E-LGIPVIPNPSHIIPVRV-GDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVW 522 (570)
T ss_pred H-cCCcccCCCcceeeeec-cCHHHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHH
Confidence 6 3442 22222 45567788888888 6799997542 245789999999999999999999999999
Q ss_pred HHHh
Q psy11784 266 TSLQ 269 (284)
Q Consensus 266 ~~~~ 269 (284)
+++.
T Consensus 523 ~~v~ 526 (570)
T KOG1360|consen 523 NEVG 526 (570)
T ss_pred HHcC
Confidence 8863
No 108
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.70 E-value=3.5e-15 Score=134.90 Aligned_cols=170 Identities=19% Similarity=0.106 Sum_probs=122.2
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc----ccccCCCCcEEEeccccc
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA----FQTQGAVPDIITVGKPMG 163 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a----~~~~g~~pDiv~~sK~l~ 163 (284)
.+++++|++++.++..|. ..|.+.+++|.++|+++|+++|+||++++++..+. ... ....+....+.+++|.++
T Consensus 130 ~~~~~~v~i~~~~~~tG~-~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~K~~~ 207 (350)
T cd00609 130 TPKTKLLYLNNPNNPTGA-VLSEEELEELAELAKKHGILIISDEAYAELVYDGE-PPPALALLDAYERVIVLRSFSKTFG 207 (350)
T ss_pred CccceEEEEECCCCCCCc-ccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc-ccccccCcCccCcEEEEeecccccC
Confidence 356999999997777786 45788999999999999999999999998765554 221 111222222347899999
Q ss_pred -CCcceeEEEecH-HHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc---------
Q psy11784 164 -NGMPIGAVITSR-KIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN--------- 201 (284)
Q Consensus 164 -~G~p~gav~~~~-~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~--------- 201 (284)
+|+++|++++++ ++.+.+.. .+++.++.+++++.|++.
T Consensus 208 ~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 287 (350)
T cd00609 208 LPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPS 287 (350)
T ss_pred CcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCC
Confidence 789999999998 78777654 124555666777777764
Q ss_pred cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 202 LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 202 ~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
.|.+..+.+. .......+.+.|.++|+.+.++.. .++++|+.|+.. ++|++.++++|+
T Consensus 288 ~g~~~~~~~~-~~~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 288 GGFFLWLDLP-EGDDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred ccEEEEEecC-CCChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 2444455542 222355566677788999987532 357999999887 999999999885
No 109
>PLN02721 threonine aldolase
Probab=99.69 E-value=7e-15 Score=133.92 Aligned_cols=185 Identities=11% Similarity=0.139 Sum_probs=126.8
Q ss_pred HHHHHHHHHhcC----CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 77 AQAARNIMEAHR----DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~----~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+.+++.+++.. +++++|++++++++.|...++.+.+++|.++|++||+++|+||+|. ++-..............
T Consensus 120 ~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~-~~~~~~~~~~~~~~~~~ 198 (353)
T PLN02721 120 LDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARI-FNASVALGVPVHRLVKA 198 (353)
T ss_pred HHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhh-hcchhhhCCCHHHHhhh
Confidence 577777776321 3578999999988866677799999999999999999999999985 32111000001101112
Q ss_pred Cc--EEEecccccCCcceeE-EEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PD--IITVGKPMGNGMPIGA-VITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pD--iv~~sK~l~~G~p~ga-v~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
.| +++++|++++ |+|+ +++++++++.+.. +++..++.+++.+.|++
T Consensus 199 ~d~~~~s~sK~l~~--~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 276 (353)
T PLN02721 199 ADSVSVCLSKGLGA--PVGSVIVGSKSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGLNQ 276 (353)
T ss_pred CCEEEEecccccCC--ceeeEEecCHHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34 4578999874 5665 5677877665322 12333455677777766
Q ss_pred ccCc----------eeEEEEeccc--HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 NLHI----------FWCLILLSIT--YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~~G~----------~~~i~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.|+ ++.+.+ +.. .....+++.|.++||.+.+.+ .+.+|+++++.++++|+++++++|++++..
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~L~~~gi~v~~~~--~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 277 IKGLRVNVAAVETNIVYFDI-TDGSRITAEKLCKSLEEHGVLLMPGN--SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred CCCcEEecCCccceEEEEEc-cCCccccHHHHHHHHHhCCcEEecCC--CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 4122 334444 221 346789999999999999854 578999999999999999999999987653
No 110
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.69 E-value=4.8e-15 Score=136.78 Aligned_cols=185 Identities=13% Similarity=0.137 Sum_probs=125.9
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc-cCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT-QGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~-~g~~pD 154 (284)
.+.+++.+. +++.+|+ +.| ++..|. .++++.+++|.++|++||+++|+||+|..|. .+. ...... .....+
T Consensus 147 ~~~l~~~~~---~~~~~v~l~~p-~NptG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~-~~~-~~~~~~~~~~~i~ 219 (380)
T PRK06225 147 PELVKENMD---ENTRLIYLIDP-LNPLGS-SYTEEEIKEFAEIARDNDAFLLHDCTYRDFA-REH-TLAAEYAPEHTVT 219 (380)
T ss_pred HHHHHhhcC---CCceEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHHCCcEEEEehhHHHHh-ccC-CchhhcCCCCEEE
Confidence 456666554 3455554 566 445565 4588899999999999999999999998763 222 111111 112234
Q ss_pred EEEeccccc-CCcceeEEEecHHHHHhchh-------------------h-------hh----HHHHHHHHHHHHHhc--
Q psy11784 155 IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------L-------DD----NRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 155 iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------l-------~~----~~~~~~~l~~~L~~~-- 201 (284)
+.++||.+| .|+++|++++++++++.+.. + ++ .+++.+.+.+.|+++
T Consensus 220 ~~s~SK~~g~~G~RiG~i~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~ 299 (380)
T PRK06225 220 SYSFSKIFGMAGLRIGAVVATPDLIEVVKSIVINDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEG 299 (380)
T ss_pred EeechhhcCCccceeEEEecCHHHHHHHHHHHhcccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 668999998 68999999999998877544 1 11 223334455566552
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++.+.+......++++.|.++||.+.++.. +.+.+|++ +..+++++++++++|.++++++
T Consensus 300 ~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~~~~~~~~iR~s--~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 300 VFLPVYPSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTSKRFGDRYIRVS--FSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred CccccCCCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccCcCCCCceEEEE--eCCCHHHHHHHHHHHHHHHHHh
Confidence 34456666532223567899999999999987521 23588996 4568999999999999999887
Q ss_pred hh
Q psy11784 269 QM 270 (284)
Q Consensus 269 ~~ 270 (284)
+.
T Consensus 378 ~~ 379 (380)
T PRK06225 378 RT 379 (380)
T ss_pred hc
Confidence 53
No 111
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=8.6e-15 Score=134.53 Aligned_cols=176 Identities=16% Similarity=0.174 Sum_probs=123.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+... +..+|++...++..|...+ .++++++|+.+++++|+||+|++|++.|. .......+..|+++
T Consensus 149 ~~~l~~~~~~~--~~~~i~l~~p~NPtG~~~~----~~~l~~l~~~~~~~lI~DE~y~~~~~~~~-~~~~~~~~~~~~~i 221 (368)
T PRK03317 149 VDAAVAAIAEH--RPDVVFLTSPNNPTGTALP----LDDVEAILDAAPGIVVVDEAYAEFRRSGT-PSALTLLPEYPRLV 221 (368)
T ss_pred HHHHHHHHhcc--CCCEEEEeCCCCCCCCCCC----HHHHHHHHHHCCceEEEeCCchhhcccCC-cCHHHHHHhCCCEE
Confidence 56777777632 3444555555777888776 77778888888999999999999976664 33344445567777
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+|||++| .|+++|++++++++++.+.. +++++++.+++.+.|++.
T Consensus 222 ~~~SfSK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 301 (368)
T PRK03317 222 VSRTMSKAFAFAGGRLGYLAAAPAVVDALRLVRLPYHLSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELGLR 301 (368)
T ss_pred EEEechhhhccchhhhhhhhCCHHHHHHHHhcCCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCE
Confidence 8999998 69999999999999887653 113344445555555543
Q ss_pred ----cCceeEE-EEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 ----LHIFWCL-ILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 ----~G~~~~i-~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.++.+ .+ .....+++.|+++||++.+.+ ..+++|++. .++++++.++++|+++++.
T Consensus 302 ~~~~~~~~~~~~~~----~~~~~~~~~l~~~Gv~v~~~~-~~~~iRi~~---~~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 302 VAPSDANFVLFGRF----ADRHAVWQGLLDRGVLIRDVG-IPGWLRVTI---GTPEENDAFLAALAEVLAT 364 (368)
T ss_pred eCCCCCcEEEEecc----CCHHHHHHHHHHCCEEEEeCC-CCCeEEEec---CCHHHHHHHHHHHHHHHHH
Confidence 1122211 11 245778999999999998754 357999973 3788999999999888753
No 112
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.66 E-value=2.2e-14 Score=130.29 Aligned_cols=181 Identities=18% Similarity=0.221 Sum_probs=122.3
Q ss_pred HHHHHHHHHhc--CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc---CC
Q psy11784 77 AQAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ---GA 151 (284)
Q Consensus 77 ~~~l~~~i~~~--~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~---g~ 151 (284)
.+.++++++.. +..+++|+++++++..|...+ +++|.++|++||+++|+||+|. +|..+......... ..
T Consensus 117 ~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~livD~a~~-~g~~~~~~~~~~~~~~~~~ 191 (349)
T cd06454 117 MEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP----LPELVDLAKKYGAILFVDEAHS-VGVYGPHGRGVEEFGGLTD 191 (349)
T ss_pred HHHHHHHHHHhhccCCCeEEEEeccccCCCCccC----HHHHHHHHHHcCCEEEEEcccc-ccccCCCCCChhhhccccc
Confidence 45677777643 245788999999998898766 8999999999999999999996 33222100011111 12
Q ss_pred CCcEE--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHH
Q psy11784 152 VPDII--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 152 ~pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~ 197 (284)
.+|++ +++|.++. +.|++++++++++.+.. .+++.++.+++.+.
T Consensus 192 ~~~i~~~s~sK~~~~--~gG~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 269 (349)
T cd06454 192 DVDIIMGTLGKAFGA--VGGYIAGSKELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRG 269 (349)
T ss_pred cCcEEEeechhhhcc--cCCEEECCHHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 35665 68899975 44788888887654422 12445566666666
Q ss_pred HHhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 198 LGIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 198 L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
|.++ .+.++.....++.....++.+.|.++||.+.+.+. .++.+|+.++...+++++++++++|+++
T Consensus 270 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 270 LKELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred HHhcCCcccCCCCCcEEEEeCCChHHHHHHHHHHHhCCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 6654 11222111112234567899999999999986432 2478999999989999999999999764
No 113
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.66 E-value=2.5e-14 Score=131.85 Aligned_cols=183 Identities=15% Similarity=0.091 Sum_probs=125.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc-cCccccc-cccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS-GSHFWAF-QTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G~~~~a~-~~~g~~pD 154 (284)
.+.+++.+. +++.+|++...++..|.. .+.+.+++|.++|++||+++|+||+|.+|... +.....+ ......+.
T Consensus 148 ~~~l~~~~~---~~~~~i~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 223 (382)
T PRK06108 148 LDRLLAAIT---PRTRALFINSPNNPTGWT-ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDR 223 (382)
T ss_pred HHHHHHhcC---ccceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCC
Confidence 566666654 356667766556666764 58999999999999999999999999987432 2101111 11111122
Q ss_pred ---EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHH
Q psy11784 155 ---IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 155 ---iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~ 199 (284)
+.+|||.++ .|+++|++++++++++.+.. .++++++.+++.+.|+
T Consensus 224 ~i~~~S~SK~~g~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 303 (382)
T PRK06108 224 IIFVNSFSKNWAMTGWRLGWLVAPPALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALR 303 (382)
T ss_pred EEEEeechhhccCcccceeeeeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 237899997 58999999999988776543 1245556666777766
Q ss_pred hc---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 200 IN---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 200 ~~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++ .|+++++.+ +......++++.|+ ++||++.++.. ..+++|+++.. +++++++++++|.+++
T Consensus 304 ~~~~~~~~~p~~g~~~~~~l-~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~--~~~~l~~~l~~l~~~l 380 (382)
T PRK06108 304 ALPGVEVAKPDGAMYAFFRI-PGVTDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFAR--DPARLDEAVERLRRFL 380 (382)
T ss_pred hCCCCcccCCCeeEEEEEeC-CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecC--CHHHHHHHHHHHHHHH
Confidence 53 244455555 23234567888886 57999988643 24689998776 8999999999998876
Q ss_pred H
Q psy11784 266 T 266 (284)
Q Consensus 266 ~ 266 (284)
+
T Consensus 381 ~ 381 (382)
T PRK06108 381 A 381 (382)
T ss_pred h
Confidence 4
No 114
>PLN00175 aminotransferase family protein; Provisional
Probab=99.63 E-value=5e-14 Score=131.53 Aligned_cols=183 Identities=13% Similarity=0.126 Sum_probs=127.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pD- 154 (284)
.+.|++.+. +++.+|++...++..|. +++++.+++|.++|++||+++|.||+|..|-..+. .... ...+..+.
T Consensus 177 ~~~l~~~~~---~~~k~i~i~~p~NPtG~-~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~v 251 (413)
T PLN00175 177 EDELKAAFT---SKTRAILINTPHNPTGK-MFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERT 251 (413)
T ss_pred HHHHHHhcC---cCceEEEecCCCCCCCc-CCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcE
Confidence 566776664 35677777766666776 56899999999999999999999999987633332 1111 11222222
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+-+|||.++ .|+++|++++++++++.+.. .+.++++.+.+.+.|++
T Consensus 252 i~i~SfSK~~~~~G~RiG~~v~~~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 331 (413)
T PLN00175 252 VTMNSLGKTFSLTGWKIGWAIAPPHLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKE 331 (413)
T ss_pred EEEecchhhccCcchheeeeEeCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 237899998 79999999999988876644 12455566667777766
Q ss_pred c--------cCceeEEEEeccc-HHHHHHHHHHH-HCCcEEeecCCC-------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSIT-YYLYRYTRRMK-EAKIIVANEGEY-------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~-~~~~~~~~~l~-~~Gv~~~~~~~~-------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+.+.. ....++++.|+ ++||.+.|+..+ .+.+||+.. .+++++++++++|.+
T Consensus 332 ~g~~~~~p~g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~--~~~e~l~~~~~rL~~ 409 (413)
T PLN00175 332 VGFKVYPSSGTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFC--KDEETLRAAVERMKT 409 (413)
T ss_pred CCCeecCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEc--CCHHHHHHHHHHHHH
Confidence 4 3445566653212 13568888887 569999987432 368999754 589999999999988
Q ss_pred HHH
Q psy11784 264 IFT 266 (284)
Q Consensus 264 ~l~ 266 (284)
+++
T Consensus 410 ~~~ 412 (413)
T PLN00175 410 KLK 412 (413)
T ss_pred HHh
Confidence 765
No 115
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.63 E-value=6.9e-14 Score=128.28 Aligned_cols=173 Identities=15% Similarity=0.150 Sum_probs=115.7
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc----cccCccccccccCC
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG----RSGSHFWAFQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g----r~G~~~~a~~~~g~ 151 (284)
.++|++.++ +++.+|+ +.+ .+..|.+.+ +++|.++|++||+++++||+|+++. +.+. .+.... .
T Consensus 141 ~~~l~~~i~---~~~~~vi~~~~-~~~tG~~~~----l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~-~~~~~~--~ 209 (371)
T PRK13520 141 VKAVEDLID---DNTIGIVGIAG-TTELGQVDP----IPELSKIALENGIFLHVDAAFGGFVIPFLDDPP-NFDFSL--P 209 (371)
T ss_pred HHHHHHHHh---hCCEEEEEEcC-CcCCcccCC----HHHHHHHHHHcCCCEEEEecchhHHHHhhcCCC-CccccC--C
Confidence 678888886 2344444 333 345788777 9999999999999999999998652 1111 122111 2
Q ss_pred CCcEEEe--cccccCCcceeEEEe-cHHHHHhch------------------h----------------------hhhHH
Q psy11784 152 VPDIITV--GKPMGNGMPIGAVIT-SRKIAESLN------------------C----------------------LDDNR 188 (284)
Q Consensus 152 ~pDiv~~--sK~l~~G~p~gav~~-~~~i~~~~~------------------~----------------------l~~~~ 188 (284)
..|.+++ .|.+.+|+|+|+++. ++++.+.+. . .++..
T Consensus 210 ~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~ 289 (371)
T PRK13520 210 GVDSITIDPHKMGLAPIPAGGILFRDESYLDALAVDTPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCM 289 (371)
T ss_pred CCceEEECCccccCccCCceEEEEcCHHHHHhhcccCccccCCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHH
Confidence 3466654 365555688988886 444544321 0 23556
Q ss_pred HHHHHHHHHHHhccCce---------eEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 189 PSGKYLVRPLGINLHIF---------WCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 189 ~~~~~l~~~L~~~~G~~---------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
++++++.+.|+++ |+- +.+.+ + ...++.+.|.++||.+.++. .++++|++++..+|++|++.+++
T Consensus 290 ~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~-~---~~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edi~~~~~ 363 (371)
T PRK13520 290 ENTRWLAEELKER-GFEPVIEPVLNIVAFDD-P---NPDEVREKLRERGWRVSVTR-CPEALRIVCMPHVTREHIENFLE 363 (371)
T ss_pred HHHHHHHHHHHhC-CCEEecCCCceEEEEec-C---CHHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHH
Confidence 6777787877764 432 12222 1 36688999999999998753 35789998877889999999999
Q ss_pred HHHHHHH
Q psy11784 260 TLNRIFT 266 (284)
Q Consensus 260 ~l~~~l~ 266 (284)
.|+++++
T Consensus 364 ~l~~~~~ 370 (371)
T PRK13520 364 DLKEVKK 370 (371)
T ss_pred HHHHHhh
Confidence 9988764
No 116
>PRK07324 transaminase; Validated
Probab=99.63 E-value=8.6e-14 Score=128.25 Aligned_cols=183 Identities=13% Similarity=0.147 Sum_probs=122.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pDi 155 (284)
.+++++.+. +++.+|++...++..|. ..+++.+++|.++|++||+++|+||+|.++...+. .... +.++-.-.+
T Consensus 143 ~~~l~~~~~---~~~kli~i~~p~NPtG~-~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~~~~~I~~ 217 (373)
T PRK07324 143 LDELRRLVR---PNTKLICINNANNPTGA-LMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADLYEKGIST 217 (373)
T ss_pred HHHHHHhCC---CCCcEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhccCCEEEE
Confidence 456665553 45667777655666665 55899999999999999999999999998754332 1111 111111123
Q ss_pred EEeccccc-CCcceeEEEecHHHHHhchh--------------------hh-----------hHHHHHHHHHHHHHhc--
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------LD-----------DNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l~-----------~~~~~~~~l~~~L~~~-- 201 (284)
-++||.++ .|+++|++++++++++.+.. ++ .++++.+.+.+.|++.
T Consensus 218 ~s~SK~~~~~G~RiG~i~~~~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~ 297 (373)
T PRK07324 218 NSMSKTYSLPGIRVGWIAANEEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPR 297 (373)
T ss_pred ecchhhcCCccceeEEEecCHHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 47899998 69999999999988876654 11 1223333444444432
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.|.+..+.+ +......+++++|+ ++||++.|+..+ .+++|++ +..+++.+.+++++|.+++++
T Consensus 298 ~~~~~p~gg~~~~i~~-~~~~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis--~~~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 298 VSYVKPKAVSTSFVKL-DVDMPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIG--YCCDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred ceEECCCceEEEEEEe-CCCCCHHHHHHHHHHhcCEEEECccccCCCCeEEEE--ecCCHHHHHHHHHHHHHHHHh
Confidence 122334444 22234667888876 679999987643 3689996 456799999999999998865
No 117
>PRK07777 aminotransferase; Validated
Probab=99.62 E-value=7.9e-14 Score=129.00 Aligned_cols=183 Identities=16% Similarity=0.165 Sum_probs=126.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCC-c
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVP-D 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~p-D 154 (284)
++++++.+. +++.+|++.+.++..|.. .+.+.+++|.++|++|++++|+||+|.++...+........+ +... +
T Consensus 149 ~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK07777 149 LDALRAAVT---PRTRALIVNSPHNPTGTV-LTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERT 224 (387)
T ss_pred HHHHHHhcC---cccEEEEEcCCCCCCCcc-CCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcE
Confidence 566666654 356677777667777764 488999999999999999999999998764323211111111 2111 2
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.++||.++ .|+++|++++++++.+.+.. .+.++++.+++.+.|++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 304 (387)
T PRK07777 225 VTISSAAKTFNVTGWKIGWACGPAPLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAALRDSLQAKRDRLAAGLAE 304 (387)
T ss_pred EEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347899998 69999999999988765543 12456667777777766
Q ss_pred c--------cCceeEEEEecc-cHHHHHHHHHHH-HCCcEEeecCCC-------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSI-TYYLYRYTRRMK-EAKIIVANEGEY-------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~-~~~~~~~~~~l~-~~Gv~~~~~~~~-------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+.+. .....++++.|+ ++||.+.|+..+ .+.+|++. ..+++++++++++|.+
T Consensus 305 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~--~~~~~~l~~~l~~l~~ 382 (387)
T PRK07777 305 AGFEVHDSAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAF--CKRDDTLDEAIRRLRA 382 (387)
T ss_pred CCCCccCCCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEe--cCCHHHHHHHHHHHHH
Confidence 4 234555565311 124678999997 579999887432 35799965 4589999999999977
Q ss_pred HH
Q psy11784 264 IF 265 (284)
Q Consensus 264 ~l 265 (284)
+.
T Consensus 383 ~~ 384 (387)
T PRK07777 383 LR 384 (387)
T ss_pred Hh
Confidence 54
No 118
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.62 E-value=1.2e-13 Score=128.63 Aligned_cols=185 Identities=12% Similarity=0.202 Sum_probs=125.3
Q ss_pred HHHHHHHHHhcCCCeeEE-EEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATL-ICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaav-i~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD- 154 (284)
.+.+++.++ +++.+| +.-| ++-.|. ..+.+.+++|.++|++||+++|.||+|..|-..|...-........+|
T Consensus 168 ~~~l~~~~~---~~~k~v~l~~P-~NPTG~-~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~ 242 (405)
T PRK06207 168 LDQLEEAFK---AGVRVFLFSNP-NNPAGV-VYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPEN 242 (405)
T ss_pred HHHHHHhhh---hcCeEEEECCC-CCCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCc
Confidence 566777665 234555 4556 555665 458899999999999999999999999976433421111111222233
Q ss_pred E---EEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHH
Q psy11784 155 I---ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLG 199 (284)
Q Consensus 155 i---v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~ 199 (284)
+ .+|||.++ .|+++|++++++++++.+.. + +..+++.+++.+.|+
T Consensus 243 vi~i~SfSK~~~lpGlRiG~ii~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~ 322 (405)
T PRK06207 243 VITIMGPSKTESLSGYRLGVAFGSPAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLR 322 (405)
T ss_pred EEEEecchhhccCcccceEEEEcCHHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2 36899998 79999999999988877644 1 122233444555554
Q ss_pred hc---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 200 IN---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 200 ~~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++ .|+++++.+.+.......+++.|+ ++||.+.|+..+ .+++|++.. .+++++++++++|.+++
T Consensus 323 ~~~~~~~~~p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~--~~~~~l~~al~rl~~~l 400 (405)
T PRK06207 323 GVEGVFVRAPQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFS--QDHAAAVAAAERIAQLI 400 (405)
T ss_pred cCCCceecCCCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Confidence 42 355666766321224577888887 689999987543 468999755 48999999999999988
Q ss_pred HHH
Q psy11784 266 TSL 268 (284)
Q Consensus 266 ~~~ 268 (284)
+++
T Consensus 401 ~~~ 403 (405)
T PRK06207 401 ERY 403 (405)
T ss_pred HHh
Confidence 764
No 119
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.60 E-value=2.5e-13 Score=125.02 Aligned_cols=176 Identities=14% Similarity=0.098 Sum_probs=122.1
Q ss_pred HHHHHHHHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 77 AQAARNIMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
++++++.++.. ..++.+|+++.+.+..|...+ +++|.++|++||+++|+||+|. +|..+. ... ...
T Consensus 129 ~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~----l~~i~~la~~~~~~livDea~~-~g~~~~---~~~--~~~ 198 (370)
T TIGR02539 129 PEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD----AGKVAKVCREKGVPLLLNCAYT-VGRMPV---SAK--EIG 198 (370)
T ss_pred HHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC----HHHHHHHHHHcCCeEEEECccc-cCCcCC---CHH--HcC
Confidence 67777777531 124667888877777888887 9999999999999999999997 433332 111 123
Q ss_pred CcEE--EecccccCCcceeEEEecHHHHHhchh----------------------------hh----------hHHHHHH
Q psy11784 153 PDII--TVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LD----------DNRPSGK 192 (284)
Q Consensus 153 pDiv--~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~----------~~~~~~~ 192 (284)
+|++ +++|++++|.|+|++++++++++.+.. ++ +..++.+
T Consensus 199 ~di~v~s~sK~~~~~g~~G~l~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~ 278 (370)
T TIGR02539 199 ADFIVGSGHKSMAASGPCGVLGMSEEWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTR 278 (370)
T ss_pred CCEEEeeCcccccCCCCEEEEEECHHHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5654 789999877789999999998875433 11 1123356
Q ss_pred HHHHHHHhccCce-----------eEEEEecc--------cHHHHHHHHHHHHCCcE-EeecCCCCCEEEEEcCCCCCHH
Q psy11784 193 YLVRPLGINLHIF-----------WCLILLSI--------TYYLYRYTRRMKEAKII-VANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 193 ~l~~~L~~~~G~~-----------~~i~~~~~--------~~~~~~~~~~l~~~Gv~-~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
++++.|+++ |+- +.+++ +. ...+..+.+.|+++||+ ++++ ..+++|++. ..+|++
T Consensus 279 ~l~~~L~~~-g~~~~~~~~s~t~~v~~~~-~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~--~~~~iRis~-~~~t~e 353 (370)
T TIGR02539 279 WFVAELEDI-GFIQLGQKPKEHDLVKFET-PGFHEIAQKHKRRGYFLYEELKKRGIHGIRSG--QTKYFKLSV-YGLTKE 353 (370)
T ss_pred HHHHHHHhC-CcEEEccCCCcCceEEEEC-CchhHHhhhhccccHHHHHHHHhCCCccccCC--cceEEEEEe-cCCCHH
Confidence 777778774 432 22222 21 11244689999999998 5542 246899986 468999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11784 253 NVLFIVSTLNRIFTS 267 (284)
Q Consensus 253 ~id~~~~~l~~~l~~ 267 (284)
|+++++++|++++++
T Consensus 354 ~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 354 QVEYVVDSFEEIVEE 368 (370)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988765
No 120
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.60 E-value=1.6e-13 Score=126.01 Aligned_cols=181 Identities=16% Similarity=0.124 Sum_probs=122.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+. +++.+|++...++..|...+ .+.+.++.+.|+ +|+++|+||+|..+...+....+....+..++++
T Consensus 144 ~~~l~~~~~---~~~~~v~l~~p~nptG~~~~-~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i 218 (367)
T PRK02731 144 LDAMLAAVT---PRTRLVFIANPNNPTGTYLP-AEEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVV 218 (367)
T ss_pred HHHHHHHhC---CCCcEEEEeCCCCCCCcCCC-HHHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEE
Confidence 566766664 35667777666777887664 444444444443 4999999999987644332111222233334554
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
++||.++ .|+++|++++++++++.+.. .+..+++.+++.+.|++.
T Consensus 219 ~~~S~SK~~g~~G~RiG~l~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~ 298 (367)
T PRK02731 219 VTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQPFNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELGLE 298 (367)
T ss_pred EEeeehHhhcCcccceeeeeCCHHHHHHHHHccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCCCc
Confidence 7899997 68999999999998876653 113344455566666553
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|.++++.+ +......++++.|.++||++.++..+ .+++|+++. ++++++.+++.|+++++
T Consensus 299 ~~~~~g~~~~i~~-~~~~~~~~~~~~L~~~gI~v~~~~~~~~~~~iRis~~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 299 YIPSVGNFILVDF-DDGKDAAEAYQALLKRGVIVRPVAGYGLPNALRITIG---TEEENRRFLAALKEFLA 365 (367)
T ss_pred cCCCCceEEEEEC-CCCCCHHHHHHHHHHCCEEEEeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHh
Confidence 456667776 33345778999999999999987543 368999753 78999999999988764
No 121
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.59 E-value=4.3e-13 Score=124.23 Aligned_cols=185 Identities=16% Similarity=0.145 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc--cCCCC-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT--QGAVP- 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~--~g~~p- 153 (284)
.+.+++.++ +++.+|++...++..|. ..|.+.+++|.++|++||+++|+||+|..+...|..+..... .+..+
T Consensus 154 ~~~l~~~l~---~~~~~v~~~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 229 (393)
T PRK05764 154 VEQLEAAIT---PKTKALILNSPSNPTGA-VYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDR 229 (393)
T ss_pred HHHHHHhhC---ccceEEEEECCCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCC
Confidence 456666664 34555555433444555 467889999999999999999999999866332321111111 12222
Q ss_pred cE--EEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHH
Q psy11784 154 DI--ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLG 199 (284)
Q Consensus 154 Di--v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~ 199 (284)
++ .++||.++ .|+++|++++++++++.+.. + ++++++.+++++.|+
T Consensus 230 ~i~~~s~SK~~~~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 309 (393)
T PRK05764 230 TITVNGFSKAYAMTGWRLGYAAGPKELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLN 309 (393)
T ss_pred EEEEecCcccccCccceeEEEecCHHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHh
Confidence 22 35899998 79999999999998877643 1 123344555566665
Q ss_pred hc---------cCceeEEEEecccH----HHHHHHHHHH-HCCcEEeecCCCC--CEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 200 IN---------LHIFWCLILLSITY----YLYRYTRRMK-EAKIIVANEGEYG--NVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 200 ~~---------~G~~~~i~~~~~~~----~~~~~~~~l~-~~Gv~~~~~~~~~--~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+. .|.++++.+.+... ...++++.++ ++||.+.++..++ +++|++ +..+++++++++++|.+
T Consensus 310 ~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis--~~~~~~~~~~~i~~l~~ 387 (393)
T PRK05764 310 EIPGLECPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLS--YATSLEDLEEGLERIER 387 (393)
T ss_pred hCCCCcccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEE--ecCCHHHHHHHHHHHHH
Confidence 53 23444555531111 2467887776 5799998875443 789996 55689999999999999
Q ss_pred HHHH
Q psy11784 264 IFTS 267 (284)
Q Consensus 264 ~l~~ 267 (284)
++++
T Consensus 388 ~~~~ 391 (393)
T PRK05764 388 FLES 391 (393)
T ss_pred HHHh
Confidence 8864
No 122
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.59 E-value=2e-13 Score=124.94 Aligned_cols=180 Identities=15% Similarity=0.140 Sum_probs=129.8
Q ss_pred HHHHHHHHHhcC-C--CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc-ccc-ccccCC
Q psy11784 77 AQAARNIMEAHR-D--NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH-FWA-FQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~-~--~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~~a-~~~~g~ 151 (284)
.++|++.+++.. . ...+|++...++..|. .++.+.+++|.++|++||+++|+||+|..+. .+.. ++. .....-
T Consensus 132 ~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~-~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~ 209 (363)
T PF00155_consen 132 PEALEEALDELPSKGPRPKAVLICNPNNPTGS-VLSLEELRELAELAREYNIIIIVDEAYSDLI-FGDPDFGPIRSLLDE 209 (363)
T ss_dssp HHHHHHHHHTSHTTTETEEEEEEESSBTTTTB-B--HHHHHHHHHHHHHTTSEEEEEETTTTGB-SSSSHTHHHHGHHTT
T ss_pred ccccccccccccccccccceeeeccccccccc-ccccccccchhhhhcccccceeeeeceeccc-cCCCccCcccccccc
Confidence 678888888432 2 3567777777777787 5589999999999999999999999998763 3321 111 111223
Q ss_pred CCc-EE--Eeccccc-CCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHH
Q psy11784 152 VPD-II--TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 ~pD-iv--~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~ 195 (284)
.++ ++ ++||.++ .|+++|++++++++++.+.. .+.++++.+++.
T Consensus 210 ~~~vi~~~S~SK~~g~~GlRvG~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~ 289 (363)
T PF00155_consen 210 DDNVIVVGSLSKSFGLPGLRVGYIVAPPELIERLRRFQRSGLSSSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLR 289 (363)
T ss_dssp TSTEEEEEESTTTTTSGGGTEEEEEEEHHHHHHHHHHHHHTTSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeeeeccccccccccccccccchhhhhhhhhhccccccccchhhHHHHHhhhcccccccccccchhhHHHHHHHHH
Confidence 333 32 6889998 68999999999999887765 124555666677
Q ss_pred HHHHhc--------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 196 RPLGIN--------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 196 ~~L~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
+.|++. .|++.++.+.. ....++++.|+++ ||.+.|+.. ..+++|++. ..++++++++++++|
T Consensus 290 ~~L~~~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~-a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 290 EALEEIGITVLPPEAGFFLWVRLDP--NDAEELAQELLEEYGILVRPGSYFGVPGYIRISL-ASHSEEDLEEALERL 363 (363)
T ss_dssp HHHHHTTSEEEHHSBSSEEEEEESH--HHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG-GCSCHHHHHHHHHHH
T ss_pred HHHHHhhhheeeccCccEEEEEccc--chHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe-ccCCHHHHHHHHhhC
Confidence 777654 46666666632 2578899999988 999998643 257899987 688999999999886
No 123
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.58 E-value=4e-13 Score=122.29 Aligned_cols=179 Identities=13% Similarity=0.143 Sum_probs=118.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+..+ .++..|++-......|...+ +++|.++|++||+++|+|++++ +|.. .+....+++..-+.
T Consensus 113 ~~~l~~~l~~~-~~~~~v~~~~~~~~~G~~~~----~~~i~~l~~~~~~~livD~~~s-~g~~---~~~~~~~~~d~~~~ 183 (355)
T TIGR03301 113 LNRIEEALAAD-PDITHVATVHHETTTGILNP----LEAIAKVARSHGAVLIVDAMSS-FGAI---PIDIEELDVDALIA 183 (355)
T ss_pred HHHHHHHHHhC-CCceEEEEEecCCcccchhH----HHHHHHHHHHcCCEEEEEeccc-cCCc---ccchhhcCccEEEe
Confidence 57788887643 34444443223344677666 8999999999999999999886 5422 22333333322234
Q ss_pred EecccccCCcceeEEEecHHHHHhch--------------------------h------------------------hhh
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLN--------------------------C------------------------LDD 186 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~--------------------------~------------------------l~~ 186 (284)
+++|+++++..+|++++++++++.+. . .++
T Consensus 184 s~~K~l~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~ 263 (355)
T TIGR03301 184 SANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIAR 263 (355)
T ss_pred cCCcccccCCceeEEEECHHHHHHhhCCCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 67899976545799999988765533 0 124
Q ss_pred HHHHHHHHHHHHHhc-----------cCceeEEEEecc-cHHHHHHHHHHHHCCcEEeecCCC-CCEEEEEcCCCCCHHH
Q psy11784 187 NRPSGKYLVRPLGIN-----------LHIFWCLILLSI-TYYLYRYTRRMKEAKIIVANEGEY-GNVLLFLPAMCLTTEN 253 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~-~~~~~~~~~~l~~~Gv~~~~~~~~-~~~lr~~p~l~~t~~~ 253 (284)
.+++.+++.+.|+++ .++++++.+... .....++.+.|.++||++.++... .+.+|+++...++++|
T Consensus 264 ~~~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~~~iRis~~~~~~~~~ 343 (355)
T TIGR03301 264 YRRNRELLVDGLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLTLADTFRIGTIGEIDAAD 343 (355)
T ss_pred HHHHHHHHHHHHHHcCCeeecCCCCCCCcEEEEECCCCCcchHHHHHHHHHHCCEEEECCccccccEEEEecCCCCCHHH
Confidence 455666777777664 112233333211 124568999999999999876422 3689999988889999
Q ss_pred HHHHHHHHHHH
Q psy11784 254 VLFIVSTLNRI 264 (284)
Q Consensus 254 id~~~~~l~~~ 264 (284)
++++++.|+++
T Consensus 344 i~~~~~~l~~~ 354 (355)
T TIGR03301 344 IERLLEAIKDA 354 (355)
T ss_pred HHHHHHHHHhh
Confidence 99999999865
No 124
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.58 E-value=7.6e-14 Score=129.23 Aligned_cols=185 Identities=19% Similarity=0.244 Sum_probs=133.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-ccccccccCC---C
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQTQGA---V 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~~g~---~ 152 (284)
.+.+++.+. +++.+|++..=.+-.|. ++++++|++|.++|++||+++|+||+|.+|-..|. .....+..+. .
T Consensus 153 ~~~l~~~i~---~ktk~i~ln~P~NPTGa-v~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~ 228 (393)
T COG0436 153 LEDLEAAIT---PKTKAIILNSPNNPTGA-VYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRT 228 (393)
T ss_pred HHHHHhhcC---ccceEEEEeCCCCCcCc-CCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceE
Confidence 677777776 36777877654555565 56999999999999999999999999999877663 1112222221 1
Q ss_pred CcEEEeccccc-CCcceeEEEec-HHHHHhchh--------------------h-------------hhHHHHHHHHHHH
Q psy11784 153 PDIITVGKPMG-NGMPIGAVITS-RKIAESLNC--------------------L-------------DDNRPSGKYLVRP 197 (284)
Q Consensus 153 pDiv~~sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------l-------------~~~~~~~~~l~~~ 197 (284)
-.+-.|||..+ .||++|+++++ +++.+.+.. + +.++++.+.+.+.
T Consensus 229 i~i~s~SK~~~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~ 308 (393)
T COG0436 229 ITINSFSKTYGMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEA 308 (393)
T ss_pred EEEecccccccccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHH
Confidence 22336899999 69999999999 877776653 1 1366777788888
Q ss_pred HHhc---------cCcee-EEEEecccHHHHHHHHHHHH-CCcEEeecCCCC-----CEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 198 LGIN---------LHIFW-CLILLSITYYLYRYTRRMKE-AKIIVANEGEYG-----NVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 198 L~~~---------~G~~~-~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~~-----~~lr~~p~l~~t~~~id~~~~~l 261 (284)
|++. .|.|+ .+.+ +...+..+|+..|++ .||.+.|+..++ +++|+ ++..++++++++++++
T Consensus 309 l~~~~g~~~~~~p~Ga~Y~~~~i-~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRi--s~~~~~~~l~~a~~rl 385 (393)
T COG0436 309 LNEIGGLSVVKPPEGAFYLFPKI-PELLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRL--SLATSEETLEEALRRL 385 (393)
T ss_pred HHhcCCeeeccCCCeeEEEEeec-CCCCCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEE--EEecCHHHHHHHHHHH
Confidence 8865 23333 3333 332467889998885 589999986544 47998 5777889999999999
Q ss_pred HHHHHHH
Q psy11784 262 NRIFTSL 268 (284)
Q Consensus 262 ~~~l~~~ 268 (284)
.+.++..
T Consensus 386 ~~~~~~~ 392 (393)
T COG0436 386 ARFLAEY 392 (393)
T ss_pred HHHHHhc
Confidence 9988653
No 125
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.56 E-value=1.2e-12 Score=121.38 Aligned_cols=187 Identities=12% Similarity=0.173 Sum_probs=127.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.+.+++.++...+++.+|++...++..|. ..+.+.+++|.++|++||+++|+||++..|-..|......... .++
T Consensus 153 ~~~l~~~~~~~~~~~~~i~l~~P~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~--~~~~~ 229 (391)
T PRK07309 153 PEMLEKAILEQGDKLKAVILNYPANPTGV-TYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEY--LPDQT 229 (391)
T ss_pred HHHHHHHhhccCCCeEEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHh--ccCCE
Confidence 57777777644445777776622555565 5578889999999999999999999998763333211121111 223
Q ss_pred E--EEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 155 I--ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 i--v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
+ -++||.++ .|+++|++++++++++.+.. + ++++++.+++.+.|++
T Consensus 230 i~~~S~SK~~g~~GlRvG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 309 (391)
T PRK07309 230 ILINGLSKSHAMTGWRIGLIFAPAEFTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTD 309 (391)
T ss_pred EEEecChhhccCccceeEEEEeCHHHHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 36899998 79999999999998876654 1 1344555666666665
Q ss_pred c--------cCceeEEEEec-ccHHHHHHHHHH-HHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLS-ITYYLYRYTRRM-KEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~--------~G~~~~i~~~~-~~~~~~~~~~~l-~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
. .|+++++.+.+ ......++++.+ .++||.+.|+..+ ++++|+..+ .+++++++++++|.++++
T Consensus 310 ~~~~~~~p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~i~~l~~~~~ 387 (391)
T PRK07309 310 LGFKIIKPDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYA--ASMETIKEAMKRLKEYME 387 (391)
T ss_pred CCCeecCCCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 3 34455555521 112356777665 4789999987532 468999754 478999999999999887
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
+.
T Consensus 388 ~~ 389 (391)
T PRK07309 388 EH 389 (391)
T ss_pred hh
Confidence 64
No 126
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.56 E-value=5.3e-13 Score=123.08 Aligned_cols=177 Identities=14% Similarity=0.107 Sum_probs=123.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++..|++..+++..|...+ +++|.++|++||+++|+|++|+ +|. ...+......|++
T Consensus 126 ~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~~~~-~g~-----~~~~~~~~~~D~~ 192 (379)
T TIGR03402 126 LEELRAAIT---DDTALVSVMWANNETGTIFP----IEEIGEIAKERGALFHTDAVQA-VGK-----IPIDLKEMNIDML 192 (379)
T ss_pred HHHHHHhcC---CCcEEEEEEcccCCeeeccc----HHHHHHHHHHcCCEEEEECccc-ccc-----cccCcccCCCCEE
Confidence 567777765 45778888888888898887 8899999999999999999997 432 1222334568999
Q ss_pred Eec--ccccCCcceeEEEecHHHHH--hc---------hh-------------------------hhhHHHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAE--SL---------NC-------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~--~~---------~~-------------------------l~~~~~~~~~l~~~L 198 (284)
++| | +.|...+|++..+++..- .+ .. .++.+++.+++++.|
T Consensus 193 ~~s~~K-~~gp~G~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~l 271 (379)
T TIGR03402 193 SLSGHK-LHGPKGVGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGL 271 (379)
T ss_pred EEcHHH-cCCCCceEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 998 9 655445788777754310 00 00 135566667777777
Q ss_pred Hh-c-----cC-------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEEE
Q psy11784 199 GI-N-----LH-------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLFL 244 (284)
Q Consensus 199 ~~-~-----~G-------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~~ 244 (284)
++ + .| ..+.+.+. ......+.+.|.++||.+..+.. ..+.+|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S 349 (379)
T TIGR03402 272 LARIPDARLNGDPTKRLPNTVNISFE--YIEGEAILLLLDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFS 349 (379)
T ss_pred HhhCCCEEEeCCCccCCCCEEEEEec--CCCHHHHHHhhccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEE
Confidence 64 3 11 11222221 12356788888889999985421 13679999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 245 PAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 245 p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
|+...|++|||++++.|+++++.+.
T Consensus 350 ~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 350 LSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988764
No 127
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.56 E-value=8.4e-13 Score=122.11 Aligned_cols=181 Identities=15% Similarity=0.174 Sum_probs=120.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pD- 154 (284)
.+.+++.+. +++.+|++..-++..|. ..+.+.+++|.++|++||+++|.||+|..|-..+. ....... +..+.
T Consensus 152 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~v 226 (384)
T PRK06348 152 VKKLEALIT---SKTKAIILNSPNNPTGA-VFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERT 226 (384)
T ss_pred HHHHHHhhC---cCccEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcE
Confidence 567777664 24455555433555565 55899999999999999999999999997732222 1111111 22222
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
+.+|||.++ .|+++|++++++++.+.+.. + +.++++.+++.+.|++
T Consensus 227 i~~~SfSK~~~l~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~ 306 (384)
T PRK06348 227 ITFGSFSKDFAMTGWRIGYVIAPDYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIES 306 (384)
T ss_pred EEEecchhccCCccccceeeecCHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 237899998 79999999999988776543 1 1234444555566654
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+ .|+++++.+........++++.|+ ++||.+.|+..+ .+.+|++. ..+++++++++++|.+.
T Consensus 307 ~~~~~~~~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 307 IPNLSLHPPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC--TVGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCCceeccCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe--cCCHHHHHHHHHHHHhh
Confidence 3 344556666312234667888886 579999987543 36899975 45899999999988653
No 128
>PRK08960 hypothetical protein; Provisional
Probab=99.55 E-value=1.9e-12 Score=119.78 Aligned_cols=181 Identities=14% Similarity=0.185 Sum_probs=120.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++. .....++..| ++..|. ..+.+.+++|.++|++||+++|+||+|..|-..+. .. ......++++
T Consensus 155 ~~~l~~~~~~--~~~~i~i~~p-~NPtG~-~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~--~~~~~~~~vi 227 (387)
T PRK08960 155 PALVERHWNA--DTVGALVASP-ANPTGT-LLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AA--SVLEVDDDAF 227 (387)
T ss_pred HHHHHHHhCc--cceEEEEECC-CCCCCc-CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CC--ChhhccCCEE
Confidence 5666666541 2244455666 455665 45889999999999999999999999987732222 11 1123445655
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh--------------------h------------hhHHHHHHHHHHHHHh
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L------------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l------------~~~~~~~~~l~~~L~~ 200 (284)
+|||.++ .|+++|++++++++++.+.. + +.++++.+.+.+.|++
T Consensus 228 ~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~ 307 (387)
T PRK08960 228 VLNSFSKYFGMTGWRLGWLVAPPAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRE 307 (387)
T ss_pred EEeecccccCCcccEEEEEEcCHHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4899997 79999999999988876643 1 1234445555555554
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
. .|+++++++........++++.|+ ++||.+.|+..+ ++++|++... +.+.+.+++++|.+++
T Consensus 308 ~~~~~~~~p~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 308 LGFGIAVEPQGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQ--SLPRLQEAVERIARGL 385 (387)
T ss_pred cCCcCCcCCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecC--CHHHHHHHHHHHHHHH
Confidence 2 334555555211124567888876 689999986332 3689997663 7888888888887766
Q ss_pred H
Q psy11784 266 T 266 (284)
Q Consensus 266 ~ 266 (284)
+
T Consensus 386 ~ 386 (387)
T PRK08960 386 R 386 (387)
T ss_pred h
Confidence 4
No 129
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.55 E-value=2e-12 Score=119.74 Aligned_cols=186 Identities=15% Similarity=0.181 Sum_probs=127.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pD- 154 (284)
.+++++.+. +++.+|++-..+...|. ..|++.+++|.++|++||+++|+||++..|-..+...... ...+..+.
T Consensus 150 ~~~l~~~i~---~~~klv~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 225 (389)
T PRK05957 150 PEAIEQAIT---PKTRAIVTISPNNPTGV-VYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHT 225 (389)
T ss_pred HHHHHHhcC---cCceEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcE
Confidence 566777664 34566665554666675 4578899999999999999999999998763322111111 11122222
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+.++||.++ .|+++|++++++++++.+.. .++++++.+++.+.|++
T Consensus 226 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~ 305 (389)
T PRK05957 226 ISLYSLSKAYGFASWRIGYMVIPIHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQ 305 (389)
T ss_pred EEEecchhhccCccceeEEEecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 347899997 68999999999999887754 12344555556666654
Q ss_pred c----------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N----------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~----------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ .|+++++.+ +......++++.|+ ++||.+.|+..+ ++++|++... .+++++++++++|.+.+
T Consensus 306 ~~~~~~~~~~~gg~~~~~~~-~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~l~~~~~~l~~~~ 383 (389)
T PRK05957 306 LQDRCTLHPANGAFYCFLKV-NTDLNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGA-LQKATAKEGIERLVQGL 383 (389)
T ss_pred cCCCccccCCCeeEEEEEeC-CCCCChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEec-CCHHHHHHHHHHHHHHH
Confidence 3 245556666 33345678989987 589999987432 3589997543 47999999999999888
Q ss_pred HHH
Q psy11784 266 TSL 268 (284)
Q Consensus 266 ~~~ 268 (284)
+.+
T Consensus 384 ~~~ 386 (389)
T PRK05957 384 KTI 386 (389)
T ss_pred Hhh
Confidence 765
No 130
>KOG1357|consensus
Probab=99.54 E-value=9.4e-14 Score=125.51 Aligned_cols=232 Identities=16% Similarity=0.199 Sum_probs=160.5
Q ss_pred CCccEEEEcCCCcccchhhhcCCCCcccc------cCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHHHHHHh---
Q psy11784 16 GRQNIVVVDAAYHGTVNLLLDISPRAFML------SSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEA--- 86 (284)
Q Consensus 16 ~r~~il~~~~~yHG~t~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~--- 86 (284)
|+...++|.-||--++....++-+..... +.++..+.. .+......+.||+ .++||++|+.
T Consensus 196 g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaR-LSgAtiRVfkHNd---------m~~LEr~Lrd~I~ 265 (519)
T KOG1357|consen 196 GVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGAR-LSGATTRVFRHND---------MQGLERLLRDAIV 265 (519)
T ss_pred CCcceEEEeccccccccCcceeecCCcceeeccccchheecccc-ccCceEEEEecCC---------HHHHHHHHHHHHh
Confidence 78889999999888876665543222111 122222221 2333333456665 6677777651
Q ss_pred c-CC------CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCC---c
Q psy11784 87 H-RD------NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVP---D 154 (284)
Q Consensus 87 ~-~~------~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~p---D 154 (284)
. .+ +.-.||+|.+.+|.|.++. |+++.+++|+|.+.|++||+|+ | .|++|. ..++++|+.| |
T Consensus 266 ~gqP~Thrp~kki~iivegiysmEg~iv~----Lp~vvalkkkykayl~lDEAHSiGA~g~tGr--gvce~~g~d~~dvD 339 (519)
T KOG1357|consen 266 YGQPKTHRPWKKILICVEGIYSMEGTIVD----LPEVVALKKKYKAYLYLDEAHSIGAMGATGR--GVCEYFGVDPEDVD 339 (519)
T ss_pred cCCCCcCCcchheeeeeccceeccCeecc----cHHHHHhhccccEEEEeeccccccccCCCCc--ceeeccCCCchhhe
Confidence 1 11 2567899999999999998 9999999999999999999998 3 478886 5778888876 4
Q ss_pred EE--EecccccC-CcceeEEEecHHHHHhchh--------------------------------------hhhHHHHHHH
Q psy11784 155 II--TVGKPMGN-GMPIGAVITSRKIAESLNC--------------------------------------LDDNRPSGKY 193 (284)
Q Consensus 155 iv--~~sK~l~~-G~p~gav~~~~~i~~~~~~--------------------------------------l~~~~~~~~~ 193 (284)
|+ |+.|.+++ | |++.+++++++.+.. +++++++..+
T Consensus 340 ImMGtftKSfga~G---Gyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~y 416 (519)
T KOG1357|consen 340 IMMGTFTKSFGAAG---GYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRY 416 (519)
T ss_pred eecceehhhccccc---ceecCcHHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHH
Confidence 43 78898875 5 788889999987765 4578888888
Q ss_pred HHHHHHhccCceeE-EEEe-------cccHHHHHHHHHHHHCCcEEeecCC-----CCCEEEEEcCCCCCHHHHHHHHHH
Q psy11784 194 LVRPLGINLHIFWC-LILL-------SITYYLYRYTRRMKEAKIIVANEGE-----YGNVLLFLPAMCLTTENVLFIVST 260 (284)
Q Consensus 194 l~~~L~~~~G~~~~-i~~~-------~~~~~~~~~~~~l~~~Gv~~~~~~~-----~~~~lr~~p~l~~t~~~id~~~~~ 260 (284)
++..|+. .|+++. .+.. -.......+.+.|+++++-+...++ -..+.||.-+..+|.|++|.+++.
T Consensus 417 fr~~l~~-~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~ 495 (519)
T KOG1357|consen 417 FRWELQK-MGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEV 495 (519)
T ss_pred HHHhhhc-CcEEEecCCCCCcceeeecCcccccHHHHHHHhcCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHH
Confidence 8888887 444432 1110 0123455688889988766553322 124679999999999999999999
Q ss_pred HHHHHHH
Q psy11784 261 LNRIFTS 267 (284)
Q Consensus 261 l~~~l~~ 267 (284)
++++=+.
T Consensus 496 i~~~g~~ 502 (519)
T KOG1357|consen 496 IDRVGDE 502 (519)
T ss_pred Hhhhchh
Confidence 8877543
No 131
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.54 E-value=5.5e-13 Score=122.07 Aligned_cols=175 Identities=13% Similarity=0.119 Sum_probs=115.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pDi 155 (284)
++++++.+. +++.++++...++..|.+.+ .+++.++|+++|+++|+||+|.+|. .+. .... ...+-.--+
T Consensus 148 ~~~l~~~~~---~~~~~v~~~~p~nptG~~~~----~~~l~~l~~~~~~~li~De~y~~~~-~~~-~~~~~~~~~~vi~~ 218 (361)
T PRK00950 148 VDSVLNAIT---EKTKVIFLCTPNNPTGNLIP----EEDIRKILESTDALVFVDEAYVEFA-EYD-YTPLALEYDNLIIG 218 (361)
T ss_pred HHHHHHHhc---cCCCEEEEeCCCCCCCCCcC----HHHHHHHHHHCCcEEEEECchhhhC-ccc-hHHHHHhcCCEEEE
Confidence 566666654 34555555544677888777 6788899999999999999998773 121 1111 111111123
Q ss_pred EEeccccc-CCcceeEEEecHHHHHhchh------------------------hh----hHHHHHHHHHHHHH-hc---c
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------LD----DNRPSGKYLVRPLG-IN---L 202 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------l~----~~~~~~~~l~~~L~-~~---~ 202 (284)
.+|||.++ .|+++|++++++++++.+.. ++ +++++.+++.+.|. .. .
T Consensus 219 ~S~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~ 298 (361)
T PRK00950 219 RTFSKVFGLAGLRIGYGFVPEWLIDYYMRAKTPFSLTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELPFKVYPSE 298 (361)
T ss_pred EeehHhhcCchhhcchhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcCeeECCCc
Confidence 38899998 68999999999998876644 11 22233333333332 00 3
Q ss_pred CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 203 HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 203 G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
|.++++.+. .....++++.|.++||++.++..+ .+.+|++.. +++++++++++|++++
T Consensus 299 ~~~i~~~~~--~~~~~~~~~~l~~~gv~v~~~~~f~~~~~~~lRis~~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 299 ANFVLVDVT--PMTAKEFCEELLKRGVIVRDCTSFRGLGDYYIRVSIG---TFEENERFLEILKEIV 360 (361)
T ss_pred ceEEEEECC--CCCHHHHHHHHHHCCEEEeeCCccCCCCCCeEEEECC---CHHHHHHHHHHHHHHh
Confidence 445555552 234678999999999999875432 358999744 7889999999998765
No 132
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.54 E-value=1.5e-12 Score=118.99 Aligned_cols=175 Identities=17% Similarity=0.171 Sum_probs=123.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+.. .++++|++-..++..|.+.+ +++|.++|++||+++++|++|. +|.. .+....+ .+|++
T Consensus 113 ~~~l~~~i~~--~~~~~v~i~~~~~~~G~~~~----~~~i~~~a~~~~~~li~D~~~~-~g~~---~~~~~~~--~~d~~ 180 (356)
T cd06451 113 PEEIAEALEQ--HDIKAVTLTHNETSTGVLNP----LEGIGALAKKHDALLIVDAVSS-LGGE---PFRMDEW--GVDVA 180 (356)
T ss_pred HHHHHHHHhc--cCCCEEEEeccCCCcccccC----HHHHHHHHHhcCCEEEEeeehh-ccCc---ccccccc--CccEE
Confidence 5677777752 24667776666677888776 9999999999999999999986 5421 1222222 35766
Q ss_pred Ee--cccccCCcceeEEEecHHHHHhch-----------------------h----------------------------
Q psy11784 157 TV--GKPMGNGMPIGAVITSRKIAESLN-----------------------C---------------------------- 183 (284)
Q Consensus 157 ~~--sK~l~~G~p~gav~~~~~i~~~~~-----------------------~---------------------------- 183 (284)
+. +|.++++..+|+++.+++.++.+. .
T Consensus 181 ~~s~~K~l~~p~g~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~ 260 (356)
T cd06451 181 YTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENR 260 (356)
T ss_pred EecCchhccCCCCcceeEECHHHHHHHHhcCCCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHH
Confidence 54 699997667899999888765432 0
Q ss_pred hhhHHHHHHHHHHHHHhccCce------------eEEEEecccHHHHHHHHHHHHC-CcEEeecCC--CCCEEEEEcCCC
Q psy11784 184 LDDNRPSGKYLVRPLGINLHIF------------WCLILLSITYYLYRYTRRMKEA-KIIVANEGE--YGNVLLFLPAMC 248 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~~G~~------------~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--~~~~lr~~p~l~ 248 (284)
.++.+++.+++.+.|++. |+- ..+.+ +.......+++.|.++ ||.+.++.. .++++|++|+..
T Consensus 261 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~ 338 (356)
T cd06451 261 WARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAVLV-PEGVDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGE 338 (356)
T ss_pred HHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEEEC-CCCCCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCC
Confidence 124455667777777764 221 11222 2223467899999998 999986532 346999999999
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIF 265 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l 265 (284)
+|++|+++++++|++++
T Consensus 339 ~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 339 ATREDVLGVLSALEEAL 355 (356)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 99999999999998875
No 133
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.54 E-value=6.9e-13 Score=122.92 Aligned_cols=185 Identities=10% Similarity=0.130 Sum_probs=122.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. .++.+|++...++..|. ..+.+.+++|.++|+++++++|+||++..|-..+.............+++
T Consensus 156 ~~~l~~~i~---~~~~~v~i~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~ 231 (391)
T PRK08361 156 PDELLELIT---KRTRMIVINYPNNPTGA-TLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTIL 231 (391)
T ss_pred HHHHHHhcc---cccEEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEE
Confidence 566766665 34556666544666675 55788899999999999999999999987632221111111111122333
Q ss_pred --Eeccccc-CCcceeEEEecHHHHHhchh--------------------h-------------hhHHHHHHHHHHHHHh
Q psy11784 157 --TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-------------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 157 --~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-------------~~~~~~~~~l~~~L~~ 200 (284)
++||.++ .|+++|++++++++++.+.. + +.++++.+.+.+.|++
T Consensus 232 ~~s~SK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 311 (391)
T PRK08361 232 ANSFSKTFAMTGWRLGFVIAPEQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKE 311 (391)
T ss_pred EecCchhcCCcHhhhhhhccCHHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899998 78999999999888776533 1 1234445556666655
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ .|+++++.+.+......++++.|+ ++||++.|+..+ .+++|++. ..+++++++++++|.++++
T Consensus 312 ~~~~~~~~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~al~~l~~~l~ 389 (391)
T PRK08361 312 MPHIKVFEPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISY--ATSKEKLIEAMERMEKALE 389 (391)
T ss_pred CCCCeecCCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHHHHHh
Confidence 3 244556666321234667888887 579999986432 36899964 4578899999999988875
Q ss_pred H
Q psy11784 267 S 267 (284)
Q Consensus 267 ~ 267 (284)
+
T Consensus 390 ~ 390 (391)
T PRK08361 390 E 390 (391)
T ss_pred c
Confidence 4
No 134
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.53 E-value=1.3e-12 Score=121.35 Aligned_cols=179 Identities=14% Similarity=0.149 Sum_probs=121.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCC---
Q psy11784 77 AQAARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGA--- 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~--- 151 (284)
.+.+++.+. +++.+|++- | ++-.|. ..+++-+++|.++|++||+++|.||+|..|-..+...... ...+.
T Consensus 156 ~~~l~~~~~---~~~k~v~l~~P-~NPTG~-~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T PRK07681 156 LELIPEEIA---DKAKMMILNFP-GNPVPA-MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEV 230 (399)
T ss_pred HHHHHHhcc---ccceEEEEeCC-CCCcCc-CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCccc
Confidence 455555553 345666655 6 555665 5589999999999999999999999998763223211111 11111
Q ss_pred CCcEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHH
Q psy11784 152 VPDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 152 ~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~ 199 (284)
.-.+-+|||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|+
T Consensus 231 ~i~~~S~SK~~~~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 310 (399)
T PRK07681 231 GVEINSLSKSYSLAGSRIGYMIGNEEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFR 310 (399)
T ss_pred EEEEeecccccCCccceeEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 112347899998 79999999999998877643 1134455556666666
Q ss_pred hc--------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 200 IN--------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 200 ~~--------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+. .|.++++.+ +......++++.+++ +||.+.|+..+ .+++|++.. .+++++++++++|.+
T Consensus 311 ~~g~~~~~p~~g~f~~~~l-~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~--~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 311 TFGWNVDKPAGSMFVWAEI-PKGWTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALV--QDEEVLQQAVENIRN 384 (399)
T ss_pred HCCCcccCCCeeeEEEEEC-CCCCCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 53 355666666 333346788888887 89999986432 368999654 678999999999987
No 135
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.53 E-value=2.6e-12 Score=117.39 Aligned_cols=179 Identities=15% Similarity=0.110 Sum_probs=120.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.++++.+-.+..|. ..+.+-+++|.++|++||+++|+||+|..+. .+.........+....++
T Consensus 126 ~~~l~~~~~---~~~~~i~i~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~-~~~~~~~~~~~~~~~~i~ 200 (350)
T TIGR03537 126 LEKVEKSIL---EETKIVWINYPHNPTGA-TAPRSYLKETIAMCREHGIILCSDECYTEIY-FGEPPHSALEVGIENVLA 200 (350)
T ss_pred HHHHHHhhh---hccEEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHcCcEEEEeccccccc-cCCCCCchhhcCcCCEEE
Confidence 566777665 24556666654555664 5689999999999999999999999997542 221111111112111122
Q ss_pred --Eeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 157 --TVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 157 --~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
++||.++ .|+++|++++++++.+.+.. .++++++.+.+.+.|++.
T Consensus 201 ~~s~SK~~g~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g~ 280 (350)
T TIGR03537 201 FHSLSKRSGMTGYRSGFVAGDEKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVGL 280 (350)
T ss_pred EeecccccCCccccceeeecCHHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 5799996 58999999999888776554 113444455555555543
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+++++++ +......++++.|.++||++.++..+ .+.+|++. ..+++++++++++|.+
T Consensus 281 ~~~~~~g~~~~~~~~-~~~~~~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~--~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 281 EYLYPDATFYLWVKV-PSGIDAKDYALRLLENGIVVAPGENFGSGEEGYVRVAL--VPTLEECEEALRLWER 349 (350)
T ss_pred cccCCCeEEEEEEEC-CCCCCHHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe--cCCHHHHHHHHHHHhc
Confidence 345566666 33335678999999999999986433 46899964 4688999999988864
No 136
>PRK07683 aminotransferase A; Validated
Probab=99.52 E-value=3.3e-12 Score=118.25 Aligned_cols=184 Identities=14% Similarity=0.119 Sum_probs=120.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pD- 154 (284)
.+.+++.+. .++.++++...++..|. .++++.+++|.++|+++|+++|+||+|..+-..+. ......+ +....
T Consensus 151 ~~~l~~~~~---~~~~~i~i~~p~NPtG~-~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~v 225 (387)
T PRK07683 151 AEALENAIT---EKTRCVVLPYPSNPTGV-TLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQP-HTSIAHFPEMREKT 225 (387)
T ss_pred HHHHHHhcC---cCceEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHcCeEEEEecccccceeCCC-cCChhhccCCcCCe
Confidence 355666554 34455555544555665 55889999999999999999999999987632222 1111111 22222
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
+.++||.++ .|+++|++++++++++.+.. + ++++++.+++.+.|++
T Consensus 226 i~~~s~SK~~~~pGlRiG~i~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (387)
T PRK07683 226 IVINGLSKSHSMTGWRIGFLFAPSYLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLIS 305 (387)
T ss_pred EEEeeccccccCccceeEEEEcCHHHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 236899999 79999999999998876643 1 1334555566666654
Q ss_pred c--------cCceeEEEEecccHHHHHHHHH-HHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRR-MKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~-l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
. .|+++++.+.+......+++.. +.++||.+.|+..+ .+++|++. ..+++++.+++++|.+++++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~--~~~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 306 MGLDVEKPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSY--AYSIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred cCCcccCCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHh
Confidence 3 2344444442112234566665 45789999986432 46899964 45899999999999988764
No 137
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.52 E-value=3.9e-12 Score=117.98 Aligned_cols=185 Identities=14% Similarity=0.173 Sum_probs=123.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pDi 155 (284)
.+.+++.+. .++.+|++...+...|. ..+.+.+++|.++|+++|+++|+||++.+|...+........+ +..+.+
T Consensus 152 ~~~l~~~~~---~~~~~v~i~~p~NPtG~-~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~ 227 (397)
T PRK07568 152 KEEIEKLIT---PKTKAILISNPGNPTGV-VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRV 227 (397)
T ss_pred HHHHHHhcC---ccceEEEEECCCCCCCc-cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCE
Confidence 456666654 34556654433455564 6688889999999999999999999999885444311121111 223344
Q ss_pred E---Eeccccc-CCcceeEEEec-HHHHHhchh-------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 156 I---TVGKPMG-NGMPIGAVITS-RKIAESLNC-------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 156 v---~~sK~l~-~G~p~gav~~~-~~i~~~~~~-------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
+ ++||.++ .|+++|+++++ +++++.+.. + +.++++.+.+.+.|++
T Consensus 228 i~~~S~SK~~~~~G~R~G~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 307 (397)
T PRK07568 228 IIIDSVSKRYSACGARIGCLISKNKELIAAAMKLCQARLSPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNK 307 (397)
T ss_pred EEEecchhhccCCCcceEEEecCCHHHHHHHHHHhhccCCCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3 7899998 49999999985 667654322 1 1345556666677765
Q ss_pred c---------cCceeEEEEecccHHHHHHHHHHHH------CCcEEeecCCC-------CCEEEEEcCCCCCHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLSITYYLYRYTRRMKE------AKIIVANEGEY-------GNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 201 ~---------~G~~~~i~~~~~~~~~~~~~~~l~~------~Gv~~~~~~~~-------~~~lr~~p~l~~t~~~id~~~ 258 (284)
. .|+++++.+. . ....++++.|.+ +||++.|+..+ .+.+|++. ..+++++++++
T Consensus 308 ~~~~~~~~p~g~~~~~~~l~-~-~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~--~~~~~~~~~~~ 383 (397)
T PRK07568 308 IPGVVCEKPKGAFYIIAKLP-V-DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAY--VLNEEDLKRAM 383 (397)
T ss_pred CCCceecCCCcceEEEEecC-C-CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEE--eCCHHHHHHHH
Confidence 3 3344566663 2 135677777765 69999986432 36899974 46789999999
Q ss_pred HHHHHHHHHHh
Q psy11784 259 STLNRIFTSLQ 269 (284)
Q Consensus 259 ~~l~~~l~~~~ 269 (284)
++|.+++++..
T Consensus 384 ~~l~~~l~~~~ 394 (397)
T PRK07568 384 EILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 138
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.52 E-value=2.8e-12 Score=119.01 Aligned_cols=176 Identities=15% Similarity=0.086 Sum_probs=122.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++..|++.-+++..|.+.+ +++|.++|++||+++|+|++|+ +|.. ........+|+.
T Consensus 147 ~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~~~-----~~~~~~~~~d~~ 213 (398)
T TIGR03392 147 IRQLPELLT---PRTRILALGQMSNVTGGCPD----LARAITLAHQYGAVVVVDGAQG-VVHG-----PPDVQALDIDFY 213 (398)
T ss_pred HHHHHHHhc---cCceEEEEECccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCC-----CCChhhcCCCEE
Confidence 567777764 35677777777888888877 8999999999999999999996 3221 111123457999
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhch------------------------h---------------------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLN------------------------C--------------------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~------------------------~--------------------------- 183 (284)
++| |.++. ..+|++++++++.+.+. .
T Consensus 214 ~~s~~K~~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~ 292 (398)
T TIGR03392 214 AFSGHKLYGP-TGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIA 292 (398)
T ss_pred EEecccccCC-CceEEEEEcHHHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHH
Confidence 888 96642 24889989888765431 0
Q ss_pred --hhhHHHHHHHHHHHHHhccC---------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CCCEEE
Q psy11784 184 --LDDNRPSGKYLVRPLGINLH---------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YGNVLL 242 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G---------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~lr 242 (284)
.++..++.+++.+.|+++.| .++.+.+ + ......+.+.|.++||.++++.. ..+.+|
T Consensus 293 ~i~~~~~~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~-~-~~~~~~l~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iR 370 (398)
T TIGR03392 293 AAEAWSVSLADLAEERLAQLPGFRSFRCPGSSLLAFDF-A-GVHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLR 370 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCCCCCcEEEEEe-C-CcCHHHHHHHHHhCCEEEecCccchHHHHHHhCCCCEEE
Confidence 12344455666666665412 2333333 1 22356788889999999986531 146899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+++....|++|++.+++.|+++++.+
T Consensus 371 vS~~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 371 ASFAPYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEeeccCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999987754
No 139
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.52 E-value=9e-13 Score=121.31 Aligned_cols=171 Identities=13% Similarity=0.139 Sum_probs=115.3
Q ss_pred CeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-C
Q psy11784 90 NIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-N 164 (284)
Q Consensus 90 ~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~ 164 (284)
++.++++ .| ++..|. ..|.+.++++.++|++ |++||+||++..|+..|. ..... ...|++ -+|||.++ .
T Consensus 155 ~~~~i~l~~P-~NPtG~-~~~~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~--~~~~~~i~~~SfSK~~g~~ 228 (369)
T PRK08153 155 NAPLVYLANP-DNPMGS-WHPAADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPID--TDDPNVIRMRTFSKAYGLA 228 (369)
T ss_pred CCcEEEEeCC-CCCCCC-CCCHHHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhh--hcCCCEEEEecchHhccCc
Confidence 4555544 56 443565 4577778888888874 999999999998865443 21111 123453 37899998 7
Q ss_pred CcceeEEEecHHHHHhchh------------------------h----hhHHHHHHHHHHHHHhc-------cCceeEEE
Q psy11784 165 GMPIGAVITSRKIAESLNC------------------------L----DDNRPSGKYLVRPLGIN-------LHIFWCLI 209 (284)
Q Consensus 165 G~p~gav~~~~~i~~~~~~------------------------l----~~~~~~~~~l~~~L~~~-------~G~~~~i~ 209 (284)
|+++|++++++++++.+.. + +.++++.+++.+.|++. .|.++.++
T Consensus 229 GlRiG~~v~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g~~~~p~~~~f~~~~ 308 (369)
T PRK08153 229 GARVGYAIGAPGTIKAFDKVRNHFGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANGLTPLPSATNFVAID 308 (369)
T ss_pred chheeeeecCHHHHHHHHHhhcCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCccCCCcCcEEEEE
Confidence 9999999999999876654 1 13334444555555543 34455555
Q ss_pred EecccHHHHHHHHHHHHCCcEEe-ecCC-CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 210 LLSITYYLYRYTRRMKEAKIIVA-NEGE-YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 210 ~~~~~~~~~~~~~~l~~~Gv~~~-~~~~-~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+..+...+..+.++|+++||.++ |+.. ..+++|++.. ++++++.+++.|++++..++
T Consensus 309 ~~~~~~~a~~l~~~l~~~Gi~v~~p~~~~~~~~iRis~~---~~~~~~~~~~al~~~~~~~~ 367 (369)
T PRK08153 309 CGRDGAFARAVLDGLIARDIFVRMPGVAPLDRCIRVSCG---PDEELDLFAEALPEALEAAR 367 (369)
T ss_pred CCCCcccHHHHHHHHHHCCeEEeeCCCCCCCCeEEEecC---CHHHHHHHHHHHHHHHHHhh
Confidence 42223457789999999999996 4322 2468999743 89999999999999987654
No 140
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.51 E-value=3.8e-13 Score=122.68 Aligned_cols=166 Identities=13% Similarity=0.087 Sum_probs=105.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC--ccccCccccccccCCCCcEE--EecccccCC
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM--GRSGSHFWAFQTQGAVPDII--TVGKPMGNG 165 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~--gr~G~~~~a~~~~g~~pDiv--~~sK~l~~G 165 (284)
+...|++++ .++.|.+. +++.|++|.++|++||+++|+||+|..+ |..|. . ....++ +|++ ++||+++ |
T Consensus 136 ~~~lIiitg-~s~~G~v~-~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~-~-~~~~~~--~divv~s~SKala-G 208 (346)
T TIGR03576 136 GTSLVVITG-STMDLKVV-SEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ-P-PALDLG--ADLVVTSTDKLMD-G 208 (346)
T ss_pred CceEEEEEC-CCCCCccc-CHHHHHHHHHHHHHcCCEEEEECCccccccccCCC-C-CHHHcC--CcEEEeccchhcc-c
Confidence 355677776 47777754 5788999999999999999999999732 21232 1 112233 4554 7899775 4
Q ss_pred cceeEEEecHHHHHhchh--------------------h---------hhHHHHHHHHHHHHHhc-----cCceeEEEEe
Q psy11784 166 MPIGAVITSRKIAESLNC--------------------L---------DDNRPSGKYLVRPLGIN-----LHIFWCLILL 211 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~~--------------------l---------~~~~~~~~~l~~~L~~~-----~G~~~~i~~~ 211 (284)
+.+|++++++++++.+.. + +.++++.+++.+.++.+ .+-++.+.+.
T Consensus 209 ~r~G~v~~~~~li~~l~~~~~~~~~s~~~~~~~aa~~aL~~~~~~~~~~~l~~r~~~~~~~l~~~~~~~~~~~f~~~~~~ 288 (346)
T TIGR03576 209 PRGGLLAGRKELVDKIKSVGEQFGLEAQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKLNVERTPTGFVIKGVE 288 (346)
T ss_pred cceEEEEeCHHHHHHHHHhhcCcccCccHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhCCCCcCCCeEEEEeCC
Confidence 578999999999887765 1 13444444455555443 1113444442
Q ss_pred cccHHHHHHHHHHHHCCcEEeecCCC---CCEEEEEcCCCCCHH---HHHHHHHHHHHHH
Q psy11784 212 SITYYLYRYTRRMKEAKIIVANEGEY---GNVLLFLPAMCLTTE---NVLFIVSTLNRIF 265 (284)
Q Consensus 212 ~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~~lr~~p~l~~t~~---~id~~~~~l~~~l 265 (284)
.........+.|.++||++.|+..+ .+++||+. ...++ +.+.+++.|++.+
T Consensus 289 -~~~~~~~~~~ll~~~gV~v~~~~~f~~~~~~vRis~--~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 289 -EEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDL--AAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred -CCCHHHHHHHHHHhCCEEEeCCcccCCCCCeEEEEE--ecChHHhcCHHHHHHHHHhcc
Confidence 1111234445566789999986432 57899963 43443 6899998887654
No 141
>PRK08912 hypothetical protein; Provisional
Probab=99.51 E-value=3.2e-12 Score=118.24 Aligned_cols=184 Identities=18% Similarity=0.136 Sum_probs=123.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCC-Cc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAV-PD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~-pD 154 (284)
.+.+++.+. +++.+|++...++..|. ..+.+.+++|.++|++|++++|+||+|..+-..+...-. ....+.. .+
T Consensus 149 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 224 (387)
T PRK08912 149 RAALAAAFS---PRTKAVLLNNPLNPAGK-VFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERT 224 (387)
T ss_pred HHHHHHHhC---ccceEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCce
Confidence 466666664 34555555433565665 557889999999999999999999999765322310111 1111221 22
Q ss_pred E--EEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 155 I--ITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 i--v~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+ -++||.++ .|+++|++++++++++.+.. .++++++.+++.+.|++
T Consensus 225 i~~~S~SK~~g~~GlRiG~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 304 (387)
T PRK08912 225 VKIGSAGKIFSLTGWKVGFVCAAPPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRR 304 (387)
T ss_pred EEEeechhhccCcCceeEEEecCHHHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3 36899999 89999999999998876643 12455566666666665
Q ss_pred c--------cCceeEEEEec-c-cHHHHHHHHHHH-HCCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLS-I-TYYLYRYTRRMK-EAKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~-~-~~~~~~~~~~l~-~~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+.+ . .....++++.|+ ++||++.|+..+ .+++|++.. .+++++++++++|.+
T Consensus 305 ~g~~~~~~~g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~--~~~~~l~~~l~rl~~ 382 (387)
T PRK08912 305 IGFPVLPSQGTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFA--KRDATLDEAVERLAA 382 (387)
T ss_pred CCCcccCCCcceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEe--CCHHHHHHHHHHHHH
Confidence 3 34556666632 1 234677888876 579999986432 368999755 578999999999988
Q ss_pred HHH
Q psy11784 264 IFT 266 (284)
Q Consensus 264 ~l~ 266 (284)
+++
T Consensus 383 ~l~ 385 (387)
T PRK08912 383 ARR 385 (387)
T ss_pred HHh
Confidence 775
No 142
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.51 E-value=1.4e-12 Score=118.34 Aligned_cols=170 Identities=16% Similarity=0.210 Sum_probs=115.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +.-+.+++.| .+..|. .++.+.+++|.++|++||+++|+||+|.+|..... ... ..+..++++
T Consensus 116 ~~~l~~~~~---~~~~v~i~~p-~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~--~~~~~~~~i 187 (330)
T TIGR01140 116 LDRLPAALE---ELDVLVLCNP-NNPTGR-LIPPETLLALAARLRARGGWLVVDEAFIDFTPDAS-LAP--QAARFPGLV 187 (330)
T ss_pred HHHHHhhcc---cCCEEEEeCC-CCCCCC-CCCHHHHHHHHHHhHhcCCEEEEECcccccCCccc-hhh--HhccCCCEE
Confidence 466666653 1124445566 455565 56899999999999999999999999987743211 111 112223333
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
++||.++ .|+++|++++++++++.+.. .++++++.+++.+.|++.
T Consensus 188 ~~~S~SK~~g~~G~R~G~i~~~~~~~~~l~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 267 (330)
T TIGR01140 188 VLRSLTKFFGLAGLRLGFVVAHPALLARLREALGPWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGL 267 (330)
T ss_pred EEEecchhhcCchhhhhheeCCHHHHHHHHhcCCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 7899998 78999999999998887654 224556666666666654
Q ss_pred -----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|.+.++.+. ...+++++|+++||++.++..+ .+.+|+..+ ...++ +.++++|
T Consensus 268 ~~~~~~~~f~~~~~~----~~~~l~~~l~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~-~~~~~~l 329 (330)
T TIGR01140 268 EVVGGTALFLLVRTP----DAAALHEALARRGILIRDFDNFPGLDPRYLRFALP--TDEEN-DRLEEAL 329 (330)
T ss_pred eECCCCCeEEEEEcC----CHHHHHHHHHHCCEEEEECCCCCCCCCCEEEEEec--CHHHH-HHHHHhh
Confidence 4556666652 2467999999999999987554 268999654 33344 7666655
No 143
>PRK12414 putative aminotransferase; Provisional
Probab=99.51 E-value=4e-12 Score=117.62 Aligned_cols=181 Identities=10% Similarity=0.092 Sum_probs=119.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~~pDi 155 (284)
.+.+++.++ +++.+|++...++-.|. ..+++.+++|.++|++||+++|+||+|..|-..|...-.. ...+....+
T Consensus 152 ~~~l~~~l~---~~~~~v~i~~p~NPTG~-~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 227 (384)
T PRK12414 152 WDEVAAAIT---PRTRMIIVNTPHNPSAT-VFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERS 227 (384)
T ss_pred HHHHHhhcC---cccEEEEEcCCCCCCCc-CCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcE
Confidence 456666654 35666766544666676 4578899999999999999999999998653233211011 111222222
Q ss_pred ---EEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 156 ---ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 156 ---v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
.+|||.++ .|+++|++++++++++.+.. .+.++++.+.+.+.|++.
T Consensus 228 i~~~SfSK~~~~pGlRiG~~v~~~~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~ 307 (384)
T PRK12414 228 VIVSSFGKSYHVTGWRVGYCLAPAELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS 307 (384)
T ss_pred EEEecccccccCccceEEEEecCHHHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 36899997 79999999999998776544 124556666677777653
Q ss_pred --------cCceeEEEEecc-cHHHHHHH-HHHHHCCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSI-TYYLYRYT-RRMKEAKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 --------~G~~~~i~~~~~-~~~~~~~~-~~l~~~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+++++.+.+. .....+++ +.|.++||.+.|+..+ .+.+|++.. .+++++++++++|.+
T Consensus 308 g~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~--~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 308 RFELLPSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFS--KDDATLVEGARRLCS 383 (384)
T ss_pred CCeecCCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 344555555310 11234555 4566889999987532 368999755 479999999998864
No 144
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.50 E-value=3.5e-12 Score=117.81 Aligned_cols=180 Identities=13% Similarity=0.146 Sum_probs=119.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc----CCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ----GAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~----g~~ 152 (284)
++++++.+. +++.+|++..-++-.|. .++.+.+++|.++|++||+++|+||+|..+...+......... +..
T Consensus 154 ~~~l~~~~~---~~~~~v~i~~P~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~ 229 (383)
T TIGR03540 154 FDAIPEDIA---KKAKLMFINYPNNPTGA-VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVG 229 (383)
T ss_pred HHHHHhhcc---ccceEEEEeCCCCCcCc-cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCE
Confidence 455655553 34666666533555665 5689999999999999999999999998653333111111111 112
Q ss_pred CcEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
-.+.+|||.+| .|+++|++++++++++.+.. .+.++++.+.+.+.|++
T Consensus 230 i~~~SfSK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (383)
T TIGR03540 230 IEFHSLSKTYNMTGWRIGMAVGNADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK 309 (383)
T ss_pred EEEEecccccCCccceeeEEeCCHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 23458999997 68999999999988876643 11344555566666665
Q ss_pred c--------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+ ++.....++++.|+ ++||.+.++..+ .+.+|++. ..+++++.+++++|.+
T Consensus 310 ~~~~~~~~~~~~~~~~~l-~~~~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 310 IGIDVEKPKATFYVWVPV-PEGYTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISL--TVPDERLEEAVARIKK 382 (383)
T ss_pred CCCEecCCCcceEEEEEC-CCCCCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEe--cCCHHHHHHHHHHHhh
Confidence 3 344566666 33335678888876 689999986432 35899975 4678888888887753
No 145
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.50 E-value=6e-12 Score=116.60 Aligned_cols=181 Identities=16% Similarity=0.094 Sum_probs=121.1
Q ss_pred HHHHHHHHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 77 AQAARNIMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+++++.++.. .+++.+|+++.+.++.|...+ +++|.++|++||+++|+|++|+ +|..+ +....+|+.
T Consensus 141 ~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~----l~~I~~la~~~g~~livD~a~~-~g~~~---~~~~~~g~D 212 (387)
T PRK09331 141 PEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD----AKKVAKVAHEYGIPFLLNGAYT-VGRMP---VDGKKLGAD 212 (387)
T ss_pred HHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCcc-cCCcC---CCHHHcCCC
Confidence 56777777632 245888999988888888777 9999999999999999999996 33222 122233443
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh----------------------------h----------hhHHHHHHHH
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------L----------DDNRPSGKYL 194 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l----------~~~~~~~~~l 194 (284)
-.+.+++|+++++.++|++++++++++.+.. + ++..++.+++
T Consensus 213 ~~~~s~~K~l~~~~~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~~~~~~~~~~~~~~~~~l 292 (387)
T PRK09331 213 FIVGSGHKSMAASAPSGVLATTEEYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHVVERVKRWDEEVKKARWF 292 (387)
T ss_pred EEEeeCcccccCCCCEEEEEECHHHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344678999877789999999987765311 1 1234556667
Q ss_pred HHHHHhccCceeE-----------EEEecc--------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 195 VRPLGINLHIFWC-----------LILLSI--------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 195 ~~~L~~~~G~~~~-----------i~~~~~--------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
++.|+++.|+-+. ++. +. ...+..+.+.|.++||...+.+ .+..+|+. ++.+|++|++
T Consensus 293 ~~~L~~l~g~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~-~~~i~ri~-~~g~t~~di~ 369 (387)
T PRK09331 293 VDELEKIEGFKQLGEKPRNHDLMKFET-PSFDEIAKKHKRRGFFLYEELKKRGIHGIKPG-ATKEFKLS-TYGLTWEQVE 369 (387)
T ss_pred HHHHhcCCCEEEeccCcCcCCeEEEeC-CchhHHhhhccccchhHHHHHHHcCceEEccC-CceEEEEE-eccCCHHHHH
Confidence 7777764343211 111 10 1123568899999999854322 12344554 5668999999
Q ss_pred HHHHHHHHHHHHH
Q psy11784 256 FIVSTLNRIFTSL 268 (284)
Q Consensus 256 ~~~~~l~~~l~~~ 268 (284)
.+++.|++++++.
T Consensus 370 ~l~~aL~~i~~~~ 382 (387)
T PRK09331 370 YVADAFKEIAEKY 382 (387)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887653
No 146
>PRK08175 aminotransferase; Validated
Probab=99.50 E-value=2.2e-12 Score=119.75 Aligned_cols=188 Identities=11% Similarity=0.102 Sum_probs=127.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.+++++.++...+.+.+|++...++..|. ..+.+.+++|.++|++||+++|+||++..+-..|..........-.+|
T Consensus 151 ~~~l~~~l~~~~~~~~~v~i~~p~NPtG~-~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~ 229 (395)
T PRK08175 151 FNELERAIRESYPKPKMMILGFPSNPTAQ-CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVA 229 (395)
T ss_pred HHHHHHHHhhccCCceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCE
Confidence 56677777644445777777644555664 568899999999999999999999999866322321111111111123
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
+.+|||.++ .|+++|++++++++++.+.. + +.++++.+++.+.|+.
T Consensus 230 i~~~S~SK~~g~pGlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (395)
T PRK08175 230 VEFFTLSKSYNMAGWRIGFMVGNPELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGLHE 309 (395)
T ss_pred EEEeeccccccCcchhheeeeCCHHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 347899996 68999999999999887644 1 1233445556666655
Q ss_pred c--------cCceeEEEEecc--cHHHHHHHHHHH-HCCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSI--TYYLYRYTRRMK-EAKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~--~~~~~~~~~~l~-~~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
. .|+++++++... .....+++++++ ++||.+.++.. ..+.+|++. ..+++.+.+++++|.+++
T Consensus 310 ~~~~~~~p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~--~~~~~~~~~al~~l~~~l 387 (395)
T PRK08175 310 AGWMVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFAL--IENRDRIRQAIRGIKAMF 387 (395)
T ss_pred cCCcccCCCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEe--CCCHHHHHHHHHHHHHHH
Confidence 3 456677776321 113577888776 67999998633 236899975 468899999999998888
Q ss_pred HH
Q psy11784 266 TS 267 (284)
Q Consensus 266 ~~ 267 (284)
++
T Consensus 388 ~~ 389 (395)
T PRK08175 388 RA 389 (395)
T ss_pred Hh
Confidence 64
No 147
>PRK09082 methionine aminotransferase; Validated
Probab=99.50 E-value=1.5e-12 Score=120.53 Aligned_cols=181 Identities=11% Similarity=0.071 Sum_probs=122.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~pDi 155 (284)
.+++++.+. +++.+|++...++..|.. ++++.+++|.++|++||+++|+||+|..+-..+...-+ ....+..+.+
T Consensus 153 ~~~l~~~~~---~~~~~v~l~~p~NPtG~~-~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~ 228 (386)
T PRK09082 153 WQRFAAAIS---PRTRLIILNTPHNPSGTV-WSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERA 228 (386)
T ss_pred HHHHHHhcC---ccceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcE
Confidence 466666664 356667776556666764 47889999999999999999999999765322221111 1122222232
Q ss_pred ---EEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 156 ---ITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 156 ---v~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
-+|||.++ .|+++|++++++++++.+.. + +.++++.+++.+.|++
T Consensus 229 i~~~S~SK~~~~~G~RiG~iv~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 308 (386)
T PRK09082 229 FVVSSFGKTYHVTGWKVGYCVAPAALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALAN 308 (386)
T ss_pred EEEeechhhccchhhhhhhhhCCHHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 37899997 68999999999998876654 1 1234556666667665
Q ss_pred c--------cCceeEEEEec-ccHHHHHHHHHH-HHCCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLS-ITYYLYRYTRRM-KEAKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~-~~~~~~~~~~~l-~~~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+.. ......++++.| .++||.+.|+..+ .+++|++.. .+++++++++++|.+
T Consensus 309 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~--~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 309 SRFKLLPCEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFA--KQEETLDAAAERLCQ 385 (386)
T ss_pred CCCcccCCCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEec--CCHHHHHHHHHHHhh
Confidence 3 35566667631 123467788876 4779999987532 368999754 589999999998864
No 148
>PRK08068 transaminase; Reviewed
Probab=99.50 E-value=5.5e-12 Score=116.84 Aligned_cols=179 Identities=14% Similarity=0.141 Sum_probs=119.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCCC-
Q psy11784 77 AQAARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAVP- 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~p- 153 (284)
++++++.+. .++.+|++- | .+-.|. .++.+.+++|.++|++||+++|+||+|..|...+..... ....+..+
T Consensus 157 ~~~l~~~~~---~~~~~v~l~~P-~NPTG~-~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~ 231 (389)
T PRK08068 157 YTKIPEEVA---EKAKLMYLNYP-NNPTGA-VATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDV 231 (389)
T ss_pred HHHHHHhcc---ccceEEEEECC-CCCCCC-cCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCC
Confidence 455555553 345555554 6 455665 668999999999999999999999999866444421111 12122222
Q ss_pred --cEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHH
Q psy11784 154 --DIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 154 --Div~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~ 199 (284)
.+.+|||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|+
T Consensus 232 ~i~~~S~SK~~g~~GlRiG~~~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~ 311 (389)
T PRK08068 232 GIELYTLSKTFNMAGWRVAFAVGNESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACR 311 (389)
T ss_pred EEEEecchhccCCccceeEeEecCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2347899997 79999999999998877654 1234555566666666
Q ss_pred hc--------cCceeEEEEecccHHHHHHHHHHHH-CCcEEeecCC----CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 200 IN--------LHIFWCLILLSITYYLYRYTRRMKE-AKIIVANEGE----YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 200 ~~--------~G~~~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~----~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+. .|+++++.+ +......++++.|++ +||++.++.. ..+++|++.. .+++.+.+++++|.+
T Consensus 312 ~~g~~~~~~~g~~~~~v~~-~~~~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 312 EIGWEVDAPKGSFFAWMPV-PKGYTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLL--TDEERLREAVERIGK 385 (389)
T ss_pred HCCCcccCCCeeEEEEEEC-CCCCCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEc--CCHHHHHHHHHHHHH
Confidence 53 234456666 333356789999986 6999988632 2468999764 567777777777754
No 149
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.49 E-value=3.5e-12 Score=118.04 Aligned_cols=172 Identities=10% Similarity=0.085 Sum_probs=116.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc-cccccccCCC-Cc---EEEeccccc-
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH-FWAFQTQGAV-PD---IITVGKPMG- 163 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~~a~~~~g~~-pD---iv~~sK~l~- 163 (284)
++.+|++-+-++-.|. ..+.+.+++|.++|++||+++|.||+|..|-..+.. .-......-. +. +-+|||.++
T Consensus 165 ~~k~i~l~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~ 243 (388)
T PRK07366 165 QARLMVLSYPHNPTTA-IAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNM 243 (388)
T ss_pred cceEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCC
Confidence 4556666665666676 568999999999999999999999999877333320 1111111111 12 238999997
Q ss_pred CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc--------cCc
Q psy11784 164 NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN--------LHI 204 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~--------~G~ 204 (284)
.|+++|++++++++++.+.. .+.++++.+++.+.|++. .|+
T Consensus 244 ~GlRiG~~v~~~~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~ 323 (388)
T PRK07366 244 GGFRIGFAIGNAQLIQALRQVKAVVDFNQYRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQIGWPVPLPEATM 323 (388)
T ss_pred cchhheehcCCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCCeeE
Confidence 79999999999998876643 113445555666666553 455
Q ss_pred eeEEEEecc-cHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 205 FWCLILLSI-TYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 205 ~~~i~~~~~-~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
++++.+.+. .....++++.++ ++||.+.|+..+ .+++|++. ..+++++++++++|.++
T Consensus 324 f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~--~~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 324 YVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL--VHDPDILEEAVERIAAF 387 (388)
T ss_pred EEEEECCcccCCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe--cCCHHHHHHHHHHHHHh
Confidence 666766311 113567777775 679999987432 36899964 45799999999999765
No 150
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.49 E-value=1.8e-12 Score=121.72 Aligned_cols=179 Identities=12% Similarity=0.077 Sum_probs=125.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceec-CCCcccCChhHHHHHHHHHHHh-CCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFV-VHGAVVPPPGWLSLMYDYIHEI-GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~-~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.++ .++.++++-|-+. -.|. ..+.+.+++|.++|++| ++++|.||+|..|...+. ... .....+.
T Consensus 201 ~~~l~~~~~---~~~k~i~~~p~p~NPTG~-~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~-~~~~~~~ 273 (431)
T PRK15481 201 PEKLERALA---QGARAVILTPRAHNPTGC-SLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSV-IPQTTQR 273 (431)
T ss_pred HHHHHHHHh---cCCCEEEECCCCCCCCCc-cCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC--CCC-CcCCCCC
Confidence 567777775 2466677766544 4565 55899999999999999 999999999987732221 111 0011233
Q ss_pred E---EEecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHH
Q psy11784 155 I---ITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 155 i---v~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L 198 (284)
+ -+|||.++.|+++|++++++++++.+.. .+.++++.+++.+.|
T Consensus 274 vi~~~SfSK~~~~GlRiG~~i~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L 353 (431)
T PRK15481 274 WALIRSVSKALGPDLRLAFVASDSATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARAL 353 (431)
T ss_pred EEEEeeeccccCCCceeEEEeCCHHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 3789999999999999999988776643 113444555566666
Q ss_pred Hhc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 199 GIN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 199 ~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
++. .|+++++.+. . ...++++.|.++||.+.|+..+ ++.+|++... .+++++++++++|.+++
T Consensus 354 ~~~~~~~~~p~gg~f~~~~l~-~--~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~-~~~~~i~~~~~~l~~~~ 429 (431)
T PRK15481 354 QQYGIAIPSPGDGLNLWLPLD-T--DSQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST-LNDAEINRLAADLHQAL 429 (431)
T ss_pred HHcCCccccCCCeEEEEEECC-C--CHHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC-CChHHHHHHHHHHHHHh
Confidence 543 4566677663 2 3567888899999999986543 2579997654 47999999999999886
Q ss_pred H
Q psy11784 266 T 266 (284)
Q Consensus 266 ~ 266 (284)
+
T Consensus 430 ~ 430 (431)
T PRK15481 430 N 430 (431)
T ss_pred c
Confidence 4
No 151
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.49 E-value=3.2e-12 Score=117.06 Aligned_cols=177 Identities=14% Similarity=0.009 Sum_probs=114.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCC-cE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP-DI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p-Di 155 (284)
++.+++.+. +++.++++...++..|...+ .+.+.++.+.|+ +|+++|+||+|..|-..+.........+-.+ .+
T Consensus 141 ~~~l~~~~~---~~~~~v~i~~p~NPtG~~~~-~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 215 (359)
T PRK03158 141 LEAMLKAID---EQTKIVWICNPNNPTGTYVN-HEELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLI 215 (359)
T ss_pred HHHHHHhcC---CCCCEEEEeCCCCCCCCCCC-HHHHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEE
Confidence 455655553 35666776666888888665 444445544442 6999999999986632221001111111112 23
Q ss_pred --EEeccccc-CCcceeEEEecHHHHHhchh------------------------h----hhHHHHHHHHHHHHHhc---
Q psy11784 156 --ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------L----DDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------l----~~~~~~~~~l~~~L~~~--- 201 (284)
.+|||.++ .|+++|++++++++++.+.. + +..++..+++.+.|++.
T Consensus 216 ~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 295 (359)
T PRK03158 216 VLRTFSKAYGLAALRVGYGIASEELIEKLNIARPPFNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYGLF 295 (359)
T ss_pred EEEechHhhcCcchhhehhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCe
Confidence 38999998 69999999999998887654 1 12334444555555542
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+. ....++++.|.++||++.++..+ .+++|++. .++++.+.++++|+++
T Consensus 296 ~~~~~g~~i~~~~~---~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 296 YYPSQTNFIFVDTG---RDANELFEALLKKGYIVRSGAALGFPTGVRITI---GLKEQNDKIIELLKEL 358 (359)
T ss_pred eCCCcCcEEEEECC---CCHHHHHHHHHHCCeEEeeCCCCCCCCeEEEec---CCHHHHHHHHHHHHHh
Confidence 4556666552 23568899999999999986433 47899963 3899999999999875
No 152
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.49 E-value=1.7e-11 Score=114.08 Aligned_cols=188 Identities=11% Similarity=0.116 Sum_probs=126.3
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc---
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD--- 154 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD--- 154 (284)
+.++++++....++.++++-.-+.-.|. .+|.+-+++|.++|++|++++|.||+|..+-..+..........-.+|
T Consensus 163 ~~l~~~~~~~~~~~~~i~~~~P~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i 241 (403)
T PRK08636 163 ENLEKALRESSPKPKYVVVNFPHNPTTA-TVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAV 241 (403)
T ss_pred hHHHHHHhhccCCceEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEE
Confidence 4567777654455666666532555565 568999999999999999999999999876322321111111111223
Q ss_pred -EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 155 -IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 155 -iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+.+|||.++ .|+++|++++++++++.+.. .+.++++.+.+.+.|++.
T Consensus 242 ~~~S~SK~~~~~GlRiG~iv~~~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (403)
T PRK08636 242 ESYTLSKSYNMAGWRVGFVVGNKKLVGALKKIKSWLDYGMFTPIQVAATIALDGDQSCVEEIRETYRKRRDVLIESFANA 321 (403)
T ss_pred EEEecccccCCccceeeeeeCCHHHHHHHHHHHHHhcccCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 235899996 79999999999998876543 112344455566666552
Q ss_pred --------cCceeEEEEecc--cHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSI--TYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --------~G~~~~i~~~~~--~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+++++.+.+. .....++++.++ ++||.+.|+..+ .+.+|++.. .+++++++++++|.++++
T Consensus 322 ~~~~~~p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~--~~~~~l~~~~~rl~~~l~ 399 (403)
T PRK08636 322 GWELQKPRASMFVWAKIPEPARHLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALI--ENENRIRQAARNIKKFLK 399 (403)
T ss_pred CCcccCCCcceEEEEECCCccCCCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 566777777311 113567877755 689999987432 468999764 689999999999999886
Q ss_pred HH
Q psy11784 267 SL 268 (284)
Q Consensus 267 ~~ 268 (284)
..
T Consensus 400 ~~ 401 (403)
T PRK08636 400 EL 401 (403)
T ss_pred hh
Confidence 63
No 153
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.49 E-value=5.9e-12 Score=116.99 Aligned_cols=176 Identities=16% Similarity=0.088 Sum_probs=122.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++++++.+. +++.+|++..+.+..|...+ +++|.++|+++|+++|+|++|+ +|.. ........+|++
T Consensus 150 ~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~i~~l~~~~g~~~ivD~a~~-~g~~-----~~~~~~~~~d~~ 216 (401)
T PRK10874 150 VDLLPELIT---PRTRILALGQMSNVTGGCPD----LARAITLAHQAGMVVMVDGAQG-AVHF-----PADVQALDIDFY 216 (401)
T ss_pred HHHHHHhcC---cCcEEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEECCcc-cccc-----cCCchhcCCCEE
Confidence 567777664 45677888878888888887 8999999999999999999996 3221 112223458887
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhch----------------------------------h-----------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLN----------------------------------C----------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~----------------------------------~----------------- 183 (284)
++| |.+|. -.+|++++++++.+.+. .
T Consensus 217 ~~s~~K~~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~ 295 (401)
T PRK10874 217 AFSGHKLYGP-TGIGVLYGKSELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDIN 295 (401)
T ss_pred EEecccccCC-CccEEEEEchHHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHH
Confidence 766 96542 23688889888766432 0
Q ss_pred --hhhHHHHHHHHHHHHHhccCc---------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CCCEEE
Q psy11784 184 --LDDNRPSGKYLVRPLGINLHI---------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YGNVLL 242 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G~---------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~lr 242 (284)
.++.++..+++.+.|+++.|+ ++.+.+. .....++.+.|.++||.++++.. ..+.+|
T Consensus 296 ~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~iR 373 (401)
T PRK10874 296 QAESWSRSLATLAEDALAKLPGFRSFRCQDSSLLAFDFA--GVHHSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTLR 373 (401)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEEC--CcCHHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEEE
Confidence 123344566666777654222 3334432 12346788889999999987532 136899
Q ss_pred EEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 243 FLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 243 ~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+++....|++|+|.+++.|+++++.+
T Consensus 374 iS~~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 374 ASFAPYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EEecccCCHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999987754
No 154
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.49 E-value=3.9e-12 Score=117.57 Aligned_cols=180 Identities=12% Similarity=0.129 Sum_probs=119.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cc---cCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QT---QGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~---~g~~ 152 (284)
++++++.+. .++.+|++.+-++-.|. ..+.+.+++|.++|++||+++|+||+|..|...|...-.. .. .+..
T Consensus 156 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (385)
T PRK09276 156 LDAIPEDVA---KKAKLMFINYPNNPTGA-VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVG 231 (385)
T ss_pred HHHHHHhcc---ccceEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCE
Confidence 445555443 34566666643555666 5689999999999999999999999998763223211111 11 1122
Q ss_pred CcEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
-.+.+|||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|++
T Consensus 232 i~~~S~SK~~g~~GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 311 (385)
T PRK09276 232 IEFHSLSKTYNMTGWRIGFAVGNADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK 311 (385)
T ss_pred EEEecchhhcCCcchhheeeeCCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 33458999997 68999999999988876643 11344555666666665
Q ss_pred c--------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
. .|+++++.+ +......+++++|+ ++||++.++..+ .+++|++.+ .+++++.+++++|.+
T Consensus 312 ~~~~~~~~~~~~~~~v~~-~~~~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 312 LGLEVEPPKATFYVWAPV-PKGYTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALT--VPDERIEEAVERIKK 384 (385)
T ss_pred CCCcccCCCcceEEEEEC-CCCCCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeC--CCHHHHHHHHHHHhh
Confidence 3 344456665 33335677888887 579999986422 368999754 578888888888753
No 155
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.49 E-value=1.7e-11 Score=115.59 Aligned_cols=191 Identities=14% Similarity=0.170 Sum_probs=124.3
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc----cc
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ----TQ 149 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~----~~ 149 (284)
.+.+++.++. .+.++.++++-.-++-.|. .+|++.+++|.++|++|++++|+||+|..+-..+..+-+.. ..
T Consensus 184 ~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~-~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~ 262 (447)
T PLN02607 184 PQALEAAYQEAEAANIRVRGVLITNPSNPLGA-TVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEAR 262 (447)
T ss_pred HHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhc
Confidence 5666766652 2335776666322444554 67899999999999999999999999986321221111111 11
Q ss_pred CC-C-Cc-E---EEeccccc-CCcceeEEEe-cHHHHHhchh--------------------------------hhhHHH
Q psy11784 150 GA-V-PD-I---ITVGKPMG-NGMPIGAVIT-SRKIAESLNC--------------------------------LDDNRP 189 (284)
Q Consensus 150 g~-~-pD-i---v~~sK~l~-~G~p~gav~~-~~~i~~~~~~--------------------------------l~~~~~ 189 (284)
+. . ++ + ..+||.++ .|+++|++++ ++++.+.+.. .+++++
T Consensus 263 ~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~~~~~~~~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~ 342 (447)
T PLN02607 263 GYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVVTTARRMSSFTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRK 342 (447)
T ss_pred CCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHH
Confidence 11 1 33 2 36899998 7999999998 6667554432 112334
Q ss_pred HHHHHHHHHHhc--------cCceeEEEEecc-----cHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCH
Q psy11784 190 SGKYLVRPLGIN--------LHIFWCLILLSI-----TYYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTT 251 (284)
Q Consensus 190 ~~~~l~~~L~~~--------~G~~~~i~~~~~-----~~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~ 251 (284)
+.+.+.+.|++. .|+++++++... .+...++++.+++ .||.+.|+..+ .+++|++... .++
T Consensus 343 ~~~~~~~~L~~~gi~~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~-~~~ 421 (447)
T PLN02607 343 RYEMIVQGLRRAGIECLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN-MSE 421 (447)
T ss_pred HHHHHHHHHHhCCCCcccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc-CCH
Confidence 444555566554 577888887411 1223567777775 69999987543 4799996442 479
Q ss_pred HHHHHHHHHHHHHHHHHh
Q psy11784 252 ENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~~~ 269 (284)
+++++++++|.+++++-.
T Consensus 422 ~~l~~gl~Ri~~~l~~~~ 439 (447)
T PLN02607 422 DTLEVALKRIHRFMDRRK 439 (447)
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999997644
No 156
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.49 E-value=5.1e-12 Score=117.90 Aligned_cols=187 Identities=15% Similarity=0.172 Sum_probs=126.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccC---C
Q psy11784 77 AQAARNIMEAHRDNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQG---A 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g---~ 151 (284)
++.+++.+. .++.+|++. | ++-.|. +.+.+.+++|.++|++||++||.||+|..+-..+. .-.+ ...+ .
T Consensus 169 ~~~l~~~~~---~~~k~i~l~nP-~NPTG~-v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~-~~s~~~~~~~~~~ 242 (410)
T PRK06290 169 LDSIPKDIK---EKAKLLYLNYP-NNPTGA-VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGK-PLSFLSVPGAKEV 242 (410)
T ss_pred HHHHHHhhc---ccceEEEEECC-CCCCCc-CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCC-CcChhcCCCcccc
Confidence 455655553 356667666 6 555665 55899999999999999999999999987632222 1111 1111 1
Q ss_pred CCcEEEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 152 VPDIITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 152 ~pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
.--+-+|||.++ .|+++|++++++++++.+.. .++++++.+++.+.|++
T Consensus 243 ~I~i~SfSK~~g~~GlRiG~ii~~~~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~ 322 (410)
T PRK06290 243 GVEIHSLSKAYNMTGWRLAFVVGNELIVKAFATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNE 322 (410)
T ss_pred EEEEeechhhcCCchhheEeEEeCHHHHHHHHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 112347899997 69999999999999887653 12345556666666665
Q ss_pred c--------cCceeEEEEeccc------HHHHHHHHHHHHCCc-EEeecCCCCCEEEEEcC-CCCCHHHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSIT------YYLYRYTRRMKEAKI-IVANEGEYGNVLLFLPA-MCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~------~~~~~~~~~l~~~Gv-~~~~~~~~~~~lr~~p~-l~~t~~~id~~~~~l~~~ 264 (284)
. .|+++++.+.+.. ....++++.|+++|+ ++.|+..+++++|++.+ ...++++-+++++.|.+.
T Consensus 323 ~g~~~~~p~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~~~lRi~~~~~~~~~~~~~~~~~~l~~~ 402 (410)
T PRK06290 323 VGFKAEMPGGTFYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDDAGHFLRFSVTFEAKDEEEEDRILEEIKRR 402 (410)
T ss_pred CCCeecCCCeeeEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCccccCeEEEEEEcccccccchhHHHHHHHHH
Confidence 4 3445556653111 246789999998764 55565445678999754 235889999999999999
Q ss_pred HHHHh
Q psy11784 265 FTSLQ 269 (284)
Q Consensus 265 l~~~~ 269 (284)
|.++.
T Consensus 403 ~~~~~ 407 (410)
T PRK06290 403 LSDVE 407 (410)
T ss_pred Hhhcc
Confidence 98764
No 157
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.49 E-value=6.1e-12 Score=113.85 Aligned_cols=177 Identities=16% Similarity=0.103 Sum_probs=114.8
Q ss_pred HHHHHHHHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC--ccccCccccccccC
Q psy11784 77 AQAARNIMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM--GRSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~--gr~G~~~~a~~~~g 150 (284)
.+++++.+... ..++++|+++...+.||. . +.+.+++|.++|++||+++|+||+|.-+ +-.|. ......
T Consensus 110 ~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~-~-~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~ 184 (338)
T cd06502 110 PEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTV-Y-PLDELKAISALAKENGLPLHLDGARLANAAAALGV---ALKTYK 184 (338)
T ss_pred HHHHHHHhhccCCCcCCcceEEEEEeecCCccc-c-CHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCC---CHHHHH
Confidence 57777777632 125778888876655443 3 8889999999999999999999987411 11121 111122
Q ss_pred CCCcEE--EecccccCCcceeE-EEecHHHHHhchh-------------------------------hhhHHHHHHHHHH
Q psy11784 151 AVPDII--TVGKPMGNGMPIGA-VITSRKIAESLNC-------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 151 ~~pDiv--~~sK~l~~G~p~ga-v~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~ 196 (284)
..+|++ +++|.++. |.|+ +++++++++.+.. .++..++.+++.+
T Consensus 185 ~~~d~~~~s~sK~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~ 262 (338)
T cd06502 185 SGVDSVSFCLSKGGGA--PVGAVVVGNRDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAE 262 (338)
T ss_pred hcCCEEEEeccccCCC--ccceEEECCHHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH
Confidence 345655 67898863 3355 4567877665432 2355566778888
Q ss_pred HHHhccCc--------eeEEEEecccHHHHHHHHHHH---HCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 197 PLGINLHI--------FWCLILLSITYYLYRYTRRMK---EAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 197 ~L~~~~G~--------~~~i~~~~~~~~~~~~~~~l~---~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|+++ |. ++.+.+.........+.+.+. ++|+++.+.+ .+.+|++|++.+|++|++++++++++
T Consensus 263 ~L~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~~--~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 263 ALEEL-GGLESEVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAWG--EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHhc-CCCcccccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEecC--CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 88774 22 223332112233344555554 6899998754 38999999999999999999998864
No 158
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.48 E-value=1.9e-12 Score=117.52 Aligned_cols=166 Identities=14% Similarity=0.132 Sum_probs=115.8
Q ss_pred CeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-C
Q psy11784 90 NIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-N 164 (284)
Q Consensus 90 ~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~ 164 (284)
++.+|+ ..| ++-.|. ..+.+.+++|.++|++||+++|.||++..|...+. .-.....+-.+.+ -+|||.++ .
T Consensus 122 ~~k~v~l~nP-~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~l~ 198 (332)
T PRK06425 122 NFDLIFIVSP-DNPLGN-LISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVLLNRSYGNVIIGRSLTKILGIP 198 (332)
T ss_pred CCCEEEEeCC-CCCcCC-ccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHHHhccCCCEEEEeecHHhcCCc
Confidence 344444 444 555676 56899999999999999999999999987743221 1111111112333 37899999 8
Q ss_pred CcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--------cCceeEEE
Q psy11784 165 GMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--------LHIFWCLI 209 (284)
Q Consensus 165 G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~i~ 209 (284)
|+++|++++++++++.+.. .+.++++.+++.+.|++. .|.++++.
T Consensus 199 GlRiGy~v~~~~li~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~g~f~~~~ 278 (332)
T PRK06425 199 SLRIGYIATDDYNMKISRKITEPWSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMGFRAAGDPSANFITFM 278 (332)
T ss_pred hhhheeeecCHHHHHHHHHcCCCCccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCceEEEEE
Confidence 9999999999999887654 113444555666666653 34455555
Q ss_pred EecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 210 LLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 210 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+ + ...++++.|+++||.+.++..+ .+++|++ ..++++.+.+++.|++++
T Consensus 279 ~-~---~~~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis---~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 279 I-P---DAHDFYSYLLKNGILVRLLDDYECLGEQYIRIA---IRRRSFNIKLVNALRNFL 331 (332)
T ss_pred c-C---CHHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 4 2 3678899999999999987544 3689996 447899999999998764
No 159
>PRK07550 hypothetical protein; Provisional
Probab=99.48 E-value=7.3e-12 Score=115.85 Aligned_cols=181 Identities=18% Similarity=0.165 Sum_probs=120.0
Q ss_pred HHHHHHHHHhcCCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccc-cccccCCC--
Q psy11784 77 AQAARNIMEAHRDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFW-AFQTQGAV-- 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~-a~~~~g~~-- 152 (284)
.+++++.++ .++.+ +++.| .+..|. .++.+.+++|.++|++||+++|.||++..|...+.... .....+..
T Consensus 153 ~~~l~~~~~---~~~~~v~~~~P-~NPtG~-~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~ 227 (386)
T PRK07550 153 PAAAEALIT---PRTRAIALVTP-NNPTGV-VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDT 227 (386)
T ss_pred HHHHHHHhc---ccCcEEEEeCC-CCCCCc-ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCcccc
Confidence 566777775 24444 44445 444565 45789999999999999999999999987732211000 11111111
Q ss_pred -CcEEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHH
Q psy11784 153 -PDIITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 153 -pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~ 199 (284)
..+.++||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|+
T Consensus 228 ~i~~~S~SK~~g~~G~RiG~i~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 307 (386)
T PRK07550 228 LVHLYSFSKSYALTGHRVGAVVASPARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFA 307 (386)
T ss_pred EEEEecchhhccCcccceEeeecCHHHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22347899998 78999999999988776544 1134455556666665
Q ss_pred hc--------cCceeEEEEecc-cHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 200 IN--------LHIFWCLILLSI-TYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 200 ~~--------~G~~~~i~~~~~-~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.. .|.+.++.+ +. .....++++.|. ++||.+.|+..+ .+.+|++... .+++++++++++|.++
T Consensus 308 ~~~~~~~~~~g~~~~~~~~-~~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~-~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 308 RLPGWELLASGAYFAYVRH-PFPDRPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFAN-ADVAGIGELVERLRAF 384 (386)
T ss_pred hCCCceeCCCceEEEEecC-CCCCCCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeec-CCHHHHHHHHHHHHhh
Confidence 42 233445554 22 345678888875 679999986432 4689998753 4799999999999764
No 160
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.48 E-value=7.4e-12 Score=116.18 Aligned_cols=179 Identities=11% Similarity=0.164 Sum_probs=114.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc---cccccc-cCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH---FWAFQT-QGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~---~~a~~~-~g~~ 152 (284)
.+++++.+. +++.+|++-..++-.|. ..+++.+++|.++|++||+++|+||+|..|-..+.. ...... .+..
T Consensus 160 ~~~l~~~~~---~~~k~i~l~~P~NPtG~-~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T PRK05942 160 LSSIPEEVA---QQAKILYFNYPSNPTTA-TAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIG 235 (394)
T ss_pred HHHHHHhcc---ccceEEEEcCCCCCCCC-cCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccE
Confidence 456666554 35666766533666675 568999999999999999999999999866333321 111111 1122
Q ss_pred CcEEEeccccc-CCcceeEEEecHHHHHhchh--------------------h-----------hhHHHHHHHHHHHHHh
Q psy11784 153 PDIITVGKPMG-NGMPIGAVITSRKIAESLNC--------------------L-----------DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 153 pDiv~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------l-----------~~~~~~~~~l~~~L~~ 200 (284)
-.+-+|||.++ .|+++|++++++++++.+.. + ++++++.+++.+.|++
T Consensus 236 i~~~SfSK~~~~~GlRiG~i~~~~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 315 (394)
T PRK05942 236 VEFHTLSKTYNMAGWRVGFVVGNRHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQERYRTRRDFLIQGLGE 315 (394)
T ss_pred EEEecchhccCChhhheeeeecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 23457899996 68999999999999877654 1 1344555566666654
Q ss_pred c--------cCceeEEEEecccHHHHHHHHHH-HHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 201 N--------LHIFWCLILLSITYYLYRYTRRM-KEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 201 ~--------~G~~~~i~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
. .|+++++.+. ......++...+ .++||.+.++..+ .+++|++.+ .+.+.+.++++++.
T Consensus 316 ~~~~~~~~~~~~f~~~~~~-~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~--~~~~~l~~~l~~l~ 387 (394)
T PRK05942 316 LGWNIPPTKATMYLWVPCP-VGMGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLI--ADCDRLGEALDRLK 387 (394)
T ss_pred CCCeecCCCeeeEEEEECC-CCCCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEec--CCHHHHHHHHHHHH
Confidence 3 3445666663 222345566654 4789999886432 468999864 34555666665554
No 161
>PRK09148 aminotransferase; Validated
Probab=99.48 E-value=2.8e-12 Score=119.44 Aligned_cols=190 Identities=11% Similarity=0.102 Sum_probs=127.2
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc---
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD--- 154 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD--- 154 (284)
+.+++.++.+..+..++++..-++-.|. .++.+.+++|.++|++||+++|+||+|..|-..+...-......-.++
T Consensus 153 ~~l~~~~~~~~~~~~~v~l~~P~NPtG~-~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i 231 (405)
T PRK09148 153 PALERAVRHSIPKPIALIVNYPSNPTAY-VADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTV 231 (405)
T ss_pred cCHHHHHhhccccceEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEE
Confidence 4455556544345555555433555665 558999999999999999999999999876322221111111111122
Q ss_pred -EEEeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 155 -IITVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 155 -iv~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+-+|||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|++.
T Consensus 232 ~~~SfSK~~~~pGlR~G~~v~~~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 311 (405)
T PRK09148 232 EFTSMSKTFSMAGWRMGFAVGNERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA 311 (405)
T ss_pred EEeccccccCCcchheeeeeCCHHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 347899998 79999999999999876643 113455556666666553
Q ss_pred --------cCceeEEEEecc--cHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSI--TYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 --------~G~~~~i~~~~~--~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|+++++.+.+. .....++++.++ ++||.+.|+..+ .+++|+..+ .+++++++++++|.++++
T Consensus 312 ~~~~~~p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~--~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 312 GWDIPPPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALV--ENEQRIRQAARNIKRFLS 389 (405)
T ss_pred CCccCCCCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Confidence 455666666311 112467888776 689999987432 368999764 689999999999999998
Q ss_pred HHhh
Q psy11784 267 SLQM 270 (284)
Q Consensus 267 ~~~~ 270 (284)
+..+
T Consensus 390 ~~~~ 393 (405)
T PRK09148 390 SADE 393 (405)
T ss_pred HHHH
Confidence 7643
No 162
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.46 E-value=1.8e-11 Score=113.93 Aligned_cols=186 Identities=14% Similarity=0.077 Sum_probs=124.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh-CCEEEEecccccCccccCccccccc--cCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI-GGVVIADEIQCGMGRSGSHFWAFQT--QGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~~~a~~~--~g~~p 153 (284)
.+.+++.+. .++.+|++...++..|. .++.+.+++|.++|++| |+++|+||+|..+...+..+..... .+...
T Consensus 156 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~ 231 (402)
T PRK06107 156 PEALEAAIT---PRTRWLILNAPSNPTGA-VYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRD 231 (402)
T ss_pred HHHHHhhcC---cCceEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccC
Confidence 456666554 34555554433555564 66899999999999998 9999999999866333321111111 11222
Q ss_pred cEE---Eeccccc-CCcceeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHH
Q psy11784 154 DII---TVGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 154 Div---~~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L 198 (284)
.++ ++||.++ .|+++|++++++++.+.+.. .+.++++.+.+.+.|
T Consensus 232 ~vi~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L 311 (402)
T PRK06107 232 RVLVTNGVSKTYAMTGWRIGYAAGPADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALL 311 (402)
T ss_pred CEEEEeccchhhcCcccceeeeecCHHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHH
Confidence 344 4689998 79999999999999887654 123555666666777
Q ss_pred Hhc---------cCceeEEEEe-------ccc---HHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHH
Q psy11784 199 GIN---------LHIFWCLILL-------SIT---YYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 199 ~~~---------~G~~~~i~~~-------~~~---~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~ 256 (284)
++. .|+++++.+. +.. .....+++.+. ++||.+.|+..+ .+++|++.. .+++++++
T Consensus 312 ~~~~g~~~~~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~--~~~e~l~~ 389 (402)
T PRK06107 312 NAIPGLSCLVPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA--TSLETLEE 389 (402)
T ss_pred hcCCCCcccCCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHH
Confidence 553 4555666552 111 13456676554 689999988655 368999655 58999999
Q ss_pred HHHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTSL 268 (284)
Q Consensus 257 ~~~~l~~~l~~~ 268 (284)
++++|.++++++
T Consensus 390 ~l~~l~~~l~~~ 401 (402)
T PRK06107 390 ACARIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHhc
Confidence 999999988765
No 163
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.46 E-value=7.2e-12 Score=116.74 Aligned_cols=173 Identities=16% Similarity=0.124 Sum_probs=118.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++...+++++|+++.+.+..|.+.+ +++|.++|++||+++++|++|+ +|.. .+..+.+| +|++
T Consensus 158 ~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~----~~~i~~~~~~~g~~~~vD~aq~-~G~~---~id~~~~g--vD~~ 227 (406)
T TIGR01814 158 LEDILDTIEKNGDDIAVILLSGVQYYTGQLFD----MAAITRAAHAKGALVGFDLAHA-VGNV---PLDLHDWG--VDFA 227 (406)
T ss_pred HHHHHHHHHhcCCCeEEEEEeccccccceecC----HHHHHHHHHHcCCEEEEEcccc-cCCc---ccccccCC--CCEE
Confidence 46677777644567899999999999999998 9999999999999999999997 4432 12333334 5665
Q ss_pred E--ecccccCCcceeEEEecHHHHHhc----------------------h----------h-------------------
Q psy11784 157 T--VGKPMGNGMPIGAVITSRKIAESL----------------------N----------C------------------- 183 (284)
Q Consensus 157 ~--~sK~l~~G~p~gav~~~~~i~~~~----------------------~----------~------------------- 183 (284)
+ ..|+|.+|.. ++++.+++..+.+ . .
T Consensus 228 ~~s~hK~l~g~pG-~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g 306 (406)
T TIGR01814 228 CWCTYKYLNAGPG-AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAG 306 (406)
T ss_pred EEcCccccCCCCC-eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcC
Confidence 4 4599977633 4444433221100 0 0
Q ss_pred ----hhhHHHHHHHHHHHHHhcc-----------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEE
Q psy11784 184 ----LDDNRPSGKYLVRPLGINL-----------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLL 242 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~~-----------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr 242 (284)
.++.+++.+++++.|+++. +.++.+.+ + .....+.+.|.++||++... .++.+|
T Consensus 307 ~~~i~~~~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~-~--~~~~~~~~~L~~~gi~v~~~--~~~~iR 381 (406)
T TIGR01814 307 MEALRKKSLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTH-P--VPGKAVFQALIKRGVIGDKR--EPSVIR 381 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEe-c--CCHHHHHHHHHHCCEEEecc--CCCeEE
Confidence 1245566667777665421 12333333 2 24567888999999988642 246899
Q ss_pred EEc-CCCCCHHHHHHHHHHHHHHH
Q psy11784 243 FLP-AMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 243 ~~p-~l~~t~~~id~~~~~l~~~l 265 (284)
++| ++..|++|||.+++.|++++
T Consensus 382 iS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 382 VAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EechhccCCHHHHHHHHHHHHHHh
Confidence 999 78999999999999998764
No 164
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.46 E-value=2.1e-12 Score=117.55 Aligned_cols=169 Identities=19% Similarity=0.176 Sum_probs=115.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
++.+++.+ .+++++|++....+..|...+ ++++.++|+.+ |+++|+||+|..+...+. ... .....++
T Consensus 132 ~~~l~~~~---~~~~~~v~l~~p~NptG~~~~----~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~-~~~--~~~~~~~ 201 (346)
T TIGR01141 132 LEDILVAI---DDKPKLVFLCSPNNPTGNLLS----RSDIEAVLERTPEDALVVVDEAYGEFSGEPS-TLP--LLAEYPN 201 (346)
T ss_pred HHHHHHhc---CCCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCCcEEEEECchhhhcCCcc-HHH--HHhhCCC
Confidence 45666544 345777877766777787665 44555555544 999999999997743222 111 1112245
Q ss_pred EE---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 155 II---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 155 iv---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
++ ++||.++ .|+++|++++++++.+.+.. .++++++.+++++.|+++
T Consensus 202 ~i~~~S~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 281 (346)
T TIGR01141 202 LIVLRTLSKAFGLAGLRIGYAIANAEIIDALNKVRAPFNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLP 281 (346)
T ss_pred EEEEehhhHhhhchhhhceeeecCHHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 44 6789996 58999999999998877643 124555566677777653
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC---CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY---GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~---~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|.++++++ +. ...++++.|.++||++.++..+ .+.+|++++ +++|++++++.|
T Consensus 282 g~~~~~~~g~~~~~~~-~~--~~~~~~~~L~~~gI~v~~g~~f~~~~~~iRls~~---~~~~i~~~~~~l 345 (346)
T TIGR01141 282 GLEVYPSDANFVLIRF-PR--DADALFEALLEKGIIVRDLNSYPGLPNCLRITVG---TREENDRFLAAL 345 (346)
T ss_pred CCEECCCcCCEEEEec-CC--CHHHHHHHHHHCCeEEEeCCCcCCCCCeEEEecC---CHHHHHHHHHHh
Confidence 355666666 32 5678999999999999987544 578999754 899999998876
No 165
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.45 E-value=1.6e-11 Score=112.80 Aligned_cols=169 Identities=17% Similarity=0.140 Sum_probs=119.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++.-+....|...+ +++|.++|++||+++++|++++ +|... + ......+|++
T Consensus 129 ~~~l~~~l~---~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~li~D~a~~-~~~~~---~--~~~~~~~d~~ 195 (373)
T cd06453 129 LEALEKLLT---ERTKLVAVTHVSNVLGTINP----VKEIGEIAHEAGVPVLVDGAQS-AGHMP---V--DVQDLGCDFL 195 (373)
T ss_pred HHHHHHHhc---CCceEEEEeCcccccCCcCC----HHHHHHHHHHcCCEEEEEhhhh-cCcee---e--eccccCCCEE
Confidence 567777775 36778888777777888776 8999999999999999999986 33221 1 1123457999
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhchh---------------------------------------------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~~--------------------------------------------------- 183 (284)
+++ |.+++ ..+|++++++++.+.+..
T Consensus 196 ~~s~~K~~~~-~g~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~ 274 (373)
T cd06453 196 AFSGHKMLGP-TGIGVLYGKEELLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGME 274 (373)
T ss_pred EeccccccCC-CCcEEEEEchHHhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHH
Confidence 888 99986 567899898887653220
Q ss_pred --hhhHHHHHHHHHHHHHhc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CCCE
Q psy11784 184 --LDDNRPSGKYLVRPLGIN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YGNV 240 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~ 240 (284)
.++.+++.+++.+.|+++ .+.++.+.+ + .....++.+.|.++||.+.++.. ..+.
T Consensus 275 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~i~~~l~~~gi~i~~g~~~~~~~~~~~~~~~~ 352 (373)
T cd06453 275 AIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNL-E-GIHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGT 352 (373)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEE-C-CcCHHHHHHHHHHCCEEeccCccchhHHHHHhCCCCe
Confidence 123445556666666654 122333443 2 12456888999999999875432 1468
Q ss_pred EEEEcCCCCCHHHHHHHHHHH
Q psy11784 241 LLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 241 lr~~p~l~~t~~~id~~~~~l 261 (284)
+|++++..+|++|+|++++.|
T Consensus 353 iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 353 VRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred EEEEecCCCCHHHHHHHHhhC
Confidence 999999999999999999864
No 166
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.45 E-value=3e-11 Score=112.39 Aligned_cols=183 Identities=15% Similarity=0.103 Sum_probs=119.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.+.+++.+. .+..+|++..-++..|. ..+.+.+++|.++|+++|+++|+||+|..|-..|..+.... ...++
T Consensus 158 ~~~l~~~~~---~~~~~v~~~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~--~~~~~~~ 231 (401)
T TIGR01264 158 LKQLESLID---EKTAALIVNNPSNPCGS-VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLA--SLSSTVP 231 (401)
T ss_pred HHHHHHHhc---cCceEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHH--HcCCCCc
Confidence 566666654 23455665433555665 56889999999999999999999999998744442111111 12232
Q ss_pred E---EEeccccc-CCcceeEEEecH------HHHHhchh-------------------h------------hhHHHHHHH
Q psy11784 155 I---ITVGKPMG-NGMPIGAVITSR------KIAESLNC-------------------L------------DDNRPSGKY 193 (284)
Q Consensus 155 i---v~~sK~l~-~G~p~gav~~~~------~i~~~~~~-------------------l------------~~~~~~~~~ 193 (284)
+ -+|||.++ .|+++|++++++ ++++.+.. + +.++++.++
T Consensus 232 vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~ 311 (401)
T TIGR01264 232 ILSCGGLAKRWLVPGWRLGWIIIHDRRGILRDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAML 311 (401)
T ss_pred EEEEccCcccCCCccceEEEEEecCcchhHHHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 3 36899955 689999999863 34332211 1 134445555
Q ss_pred HHHHHHhc---------cCceeEEEEec----ccHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHH
Q psy11784 194 LVRPLGIN---------LHIFWCLILLS----ITYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 194 l~~~L~~~---------~G~~~~i~~~~----~~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~ 257 (284)
+.+.|+++ .|+++++.+.. ......++++.|+ ++||++.|+..+ .+++|++. ..++++++++
T Consensus 312 l~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~--~~~~~~l~~~ 389 (401)
T TIGR01264 312 CYGALAAVPGLRPVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVL--TVPVVMMEEA 389 (401)
T ss_pred HHHHHHhCCCCcccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEE--cCCHHHHHHH
Confidence 66666553 45566666531 1113567888876 789999987543 47899965 4578999999
Q ss_pred HHHHHHHHHH
Q psy11784 258 VSTLNRIFTS 267 (284)
Q Consensus 258 ~~~l~~~l~~ 267 (284)
+++|.+++++
T Consensus 390 l~rl~~~~~~ 399 (401)
T TIGR01264 390 CSRIQEFCER 399 (401)
T ss_pred HHHHHHHHhc
Confidence 9999988764
No 167
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.44 E-value=3.6e-11 Score=112.26 Aligned_cols=187 Identities=16% Similarity=0.143 Sum_probs=121.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC-CCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG-AVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g-~~pDi 155 (284)
.+++++.+. .++.+|++..-++-.|. ..+.+-+++|.++|++||+++|.||++..|-..+..+.....+. -.+-+
T Consensus 167 ~~~l~~~~~---~~~~~i~~~~p~NPtG~-~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i 242 (412)
T PTZ00433 167 LDEIRRLVD---DRTKALIMTNPSNPCGS-NFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRV 242 (412)
T ss_pred HHHHHHHhc---cCceEEEEeCCCCCCCc-ccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceE
Confidence 456666554 34555665433555664 55888999999999999999999999987733332111111111 11223
Q ss_pred E--Eeccccc-CCcceeEEEe------cHHHHHhchh-------------------h------------hhHHHHHHHHH
Q psy11784 156 I--TVGKPMG-NGMPIGAVIT------SRKIAESLNC-------------------L------------DDNRPSGKYLV 195 (284)
Q Consensus 156 v--~~sK~l~-~G~p~gav~~------~~~i~~~~~~-------------------l------------~~~~~~~~~l~ 195 (284)
+ +|||.++ .|+++|++++ .+++++.+.. + ++++++.+.+.
T Consensus 243 ~~~SfSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~ 322 (412)
T PTZ00433 243 ILGGTAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLY 322 (412)
T ss_pred EEccchhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHH
Confidence 2 6899995 6899999997 2445544322 1 13444555566
Q ss_pred HHHHhc---------cCceeEEEEecc----cHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHH
Q psy11784 196 RPLGIN---------LHIFWCLILLSI----TYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 196 ~~L~~~---------~G~~~~i~~~~~----~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~ 259 (284)
+.|++. .|+++++.+... .....++++.|+ ++||.+.++..+ .+.+|++.. ..+++++++++
T Consensus 323 ~~L~~~~~~~~~~p~gg~f~~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~--~~~e~l~~al~ 400 (412)
T PTZ00433 323 NHIGECIGLSPTMPRGSMFLMSRLDLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTIS--RPVEVLREAVE 400 (412)
T ss_pred HHHhcCCCCcccCCCeeEEEEEEechhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEec--CCHHHHHHHHH
Confidence 666542 355666666311 113567888888 579999987544 478999754 46889999999
Q ss_pred HHHHHHHHHh
Q psy11784 260 TLNRIFTSLQ 269 (284)
Q Consensus 260 ~l~~~l~~~~ 269 (284)
+|.++++...
T Consensus 401 ~l~~~~~~~~ 410 (412)
T PTZ00433 401 RIKAFCERHK 410 (412)
T ss_pred HHHHHHHHhc
Confidence 9999887543
No 168
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.44 E-value=1.9e-11 Score=113.45 Aligned_cols=181 Identities=11% Similarity=0.023 Sum_probs=119.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-cccc-cc---ccCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWA-FQ---TQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a-~~---~~g~ 151 (284)
.+.+++.+. .++.++++-.-++-.|. ..+++.+++|.++|++|++++|.||+|..|-..+. .... .. ..+.
T Consensus 156 ~~~l~~~~~---~~~k~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~ 231 (396)
T PRK09147 156 FDAVPAEVW---ARTQLLFVCSPGNPTGA-VLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGR 231 (396)
T ss_pred HHHHHHHHh---hccEEEEEcCCCCCcCc-cCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCc
Confidence 456665553 24566665433555665 56899999999999999999999999987632221 0111 00 1111
Q ss_pred --CCcE---EEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHH
Q psy11784 152 --VPDI---ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 --~pDi---v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~ 195 (284)
.+.+ -+|||.++ .|+++|++++++++++.+.. .+.++++.+.+.
T Consensus 232 ~~~~~vi~~~S~SK~~~~~GlRiG~~~~~~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
T PRK09147 232 DDFKRLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLYRTYHGCAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVT 311 (396)
T ss_pred cccccEEEEeccccccCCccceeeeecCCHHHHHHHHHHhhhcccCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 1222 37899875 58999999999998876543 113444445555
Q ss_pred HHHHhc-------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----------CCEEEEEcCCCCCHHHHHHH
Q psy11784 196 RPLGIN-------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----------GNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 196 ~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----------~~~lr~~p~l~~t~~~id~~ 257 (284)
+.|++. .|+++++++ + ....++++.|+ ++||.+.|+..+ .+++|+.. ..++++++++
T Consensus 312 ~~L~~~~~~~~p~~g~f~~~~~-~--~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~--~~~~~~l~~~ 386 (396)
T PRK09147 312 PILAPVLDVQLPDAGFYLWAKV-P--GDDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIAL--VAPLAECVEA 386 (396)
T ss_pred HHHHHhcCCCCCCeeEEEEEEC-C--CCHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEe--cCCHHHHHHH
Confidence 555442 566777776 3 23467878876 679999887432 36899964 4578999999
Q ss_pred HHHHHHHHH
Q psy11784 258 VSTLNRIFT 266 (284)
Q Consensus 258 ~~~l~~~l~ 266 (284)
+++|.++++
T Consensus 387 l~rl~~~~~ 395 (396)
T PRK09147 387 AERIVDFCR 395 (396)
T ss_pred HHHHHHHhc
Confidence 999988763
No 169
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.44 E-value=3.8e-11 Score=108.88 Aligned_cols=163 Identities=15% Similarity=0.085 Sum_probs=113.7
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc---EEEeccccc-CCcc
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD---IITVGKPMG-NGMP 167 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD---iv~~sK~l~-~G~p 167 (284)
..+++.| ++-.|. ..+.+.+++|.++|+++|+++|.||++..+..... ... ..-.+. +-+|||.++ .|++
T Consensus 127 ~v~l~nP-~NPTG~-~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s-~~~---~~~~~~vi~~~SfSK~~gl~GlR 200 (330)
T PRK05664 127 VLVVVNP-NNPTGR-RFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHS-LAA---CAHRPGLIVLRSFGKFFGLAGAR 200 (330)
T ss_pred EEEEeCC-cCCCCC-ccCHHHHHHHHHHHHhcCCEEEEECCcccCCCccc-ccc---cccCCCEEEEeeccccccCCCcc
Confidence 4577788 355666 55888899999999999999999999986632111 111 111233 337999998 8999
Q ss_pred eeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-----cC--ceeEEEEec
Q psy11784 168 IGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-----LH--IFWCLILLS 212 (284)
Q Consensus 168 ~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-----~G--~~~~i~~~~ 212 (284)
+|++++++++++.+.. .+.+.++.+++.+.|++. .| +++++.. +
T Consensus 201 iG~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~f~~~~~-~ 279 (330)
T PRK05664 201 LGFVLAEPALLRALAELLGPWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHGLTPAGGCALFQWVRT-E 279 (330)
T ss_pred eEEEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCCCcccCCcceEEEEec-C
Confidence 9999999998877654 124555666677777664 22 3334433 2
Q ss_pred ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 213 ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 213 ~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...++.+.|.++||++...+ ..+.+|++.. .++++.+++++.|++..++
T Consensus 280 ---~~~~~~~~l~~~gi~v~~f~-~~~~iRis~~--~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 ---DAAALHEFLARRGILTRLFE-QPASLRFGLP--ADEADWARLDQALLAYRKE 328 (330)
T ss_pred ---CHHHHHHHHHHCCeEEEECC-CCCeEEEECC--CCHHHHHHHHHHHHHHHhh
Confidence 45788899999999998643 3578999644 3678888888888766543
No 170
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.44 E-value=1.4e-11 Score=116.56 Aligned_cols=188 Identities=13% Similarity=0.099 Sum_probs=139.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc---CCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ---GAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~---g~~ 152 (284)
.+.|++.++.+ ++.++.+-|. |.-.|. ..|.+--++|.++|++||+++|-||.+.-|...+...-....+ +-.
T Consensus 215 ~e~le~~~~~~--~~k~~y~~P~~qNPtG~-tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rV 291 (459)
T COG1167 215 PEALEEALAQW--KPKAVYVTPTFQNPTGV-TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRV 291 (459)
T ss_pred HHHHHHHHhhc--CCcEEEECCCCCCCCCC-ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCE
Confidence 67888888733 6889999997 555665 5688999999999999999999999998774443311111111 222
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHH
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~ 199 (284)
--+-+|||.+.-|+++|++++++++++.+.. ...++++.+.+.+.|+
T Consensus 292 iy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~ 371 (459)
T COG1167 292 IYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALA 371 (459)
T ss_pred EEEeeehhhcccccceeeeeCCHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345899999999999999999998887755 1134445555555555
Q ss_pred hc-----------cCceeEEEEecccHHHHHHHHHHHHCCcEEee-cCC------CCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 200 IN-----------LHIFWCLILLSITYYLYRYTRRMKEAKIIVAN-EGE------YGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 200 ~~-----------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~-~~~------~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
+. .|+++++++ +...+...+.+.++++|+.+.+ +.. ..+.+|+..+.. +++++++.+.+|
T Consensus 372 ~~~~~~~~~~~p~gG~flwl~l-~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~-~~e~i~~gi~~l 449 (459)
T COG1167 372 EYLPELATWTRPEGGLFLWLEL-PEGIDARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSSP-SEEEIEEGIKRL 449 (459)
T ss_pred HhCCCCeeeecCCceEEEEEEc-CCCCCHHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCCC-CHHHHHHHHHHH
Confidence 54 478889988 4555688999999999999998 322 245899987655 699999999999
Q ss_pred HHHHHHHh
Q psy11784 262 NRIFTSLQ 269 (284)
Q Consensus 262 ~~~l~~~~ 269 (284)
.+++.+..
T Consensus 450 ~~~~~~~~ 457 (459)
T COG1167 450 AALLREAA 457 (459)
T ss_pred HHHHHHHh
Confidence 99988753
No 171
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.44 E-value=3.4e-11 Score=111.76 Aligned_cols=182 Identities=12% Similarity=0.081 Sum_probs=123.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH------hCCEEEEecccccCccccCccccccccC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE------IGGVVIADEIQCGMGRSGSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tG~gr~G~~~~a~~~~g 150 (284)
++++++.++ +++.+|++...++..|. ..|.+.+++|.++|++ ||+++|.||++..|-..|...... ..
T Consensus 158 ~~~l~~~~~---~~~~~v~~~~p~NPtG~-~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~--~~ 231 (394)
T PRK06836 158 LDALEAAIT---PKTKAVIINSPNNPTGV-VYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYI--FK 231 (394)
T ss_pred HHHHHhhcC---cCceEEEEeCCCCCCCc-CCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCCh--HH
Confidence 567777664 34666776554555665 5588899999999999 899999999998773333211110 11
Q ss_pred CCCcEE---Eeccccc-CCcceeEEEecHHHHHh------ch---------h------------------hhhHHHHHHH
Q psy11784 151 AVPDII---TVGKPMG-NGMPIGAVITSRKIAES------LN---------C------------------LDDNRPSGKY 193 (284)
Q Consensus 151 ~~pDiv---~~sK~l~-~G~p~gav~~~~~i~~~------~~---------~------------------l~~~~~~~~~ 193 (284)
..+.++ ++||.++ .|+++|++++++++.+. +. . ...++++.+.
T Consensus 232 ~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~r~~ 311 (394)
T PRK06836 232 YYDNSIVVYSFSKSLSLPGERIGYIAVNPEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATVDVSIYKRNRDL 311 (394)
T ss_pred ccCcEEEEecchhhccCcceeeEEEecCHHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChHHHHHHHHHHHH
Confidence 112332 5899998 79999999998765321 10 0 1134556666
Q ss_pred HHHHHHhc--------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 194 LVRPLGIN--------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 194 l~~~L~~~--------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+.+.|++. .|+++++.+ +. ....++++.|.++||.+.++..+ .+.+||... .+++++++++++|.+
T Consensus 312 l~~~L~~~g~~~~~~~gg~~~~~~~-~~-~~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~~--~~~~~~~~~i~~l~~ 387 (394)
T PRK06836 312 LYDGLTELGFECVKPQGAFYLFPKS-PE-EDDVAFCEKAKKHNLLLVPGSGFGCPGYFRLSYC--VDTETIERSLPAFEK 387 (394)
T ss_pred HHHHHHhCCCEeecCCceEEEEEeC-CC-CCHHHHHHHHHhCCEEEECchhcCCCCeEEEEec--CCHHHHHHHHHHHHH
Confidence 76777653 244555554 33 24567888899999999987533 468999765 689999999999999
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
++++.
T Consensus 388 ~l~~~ 392 (394)
T PRK06836 388 LAKEY 392 (394)
T ss_pred HHHHh
Confidence 98764
No 172
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.44 E-value=3.7e-11 Score=110.14 Aligned_cols=176 Identities=13% Similarity=0.143 Sum_probs=119.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+..+. ++..|.+--+.+..|.+.+ +++|.++|++||+++|+|.+|+ +|... +.... ..+|++
T Consensus 117 ~~~l~~~l~~~~-~~~~v~~~~~~~~tG~~~~----i~~I~~l~~~~g~~livD~~~~-~g~~~---~~~~~--~~~D~~ 185 (363)
T TIGR02326 117 VVEVEAILAADP-AITHIALVHCETTTGILNP----IEAVAKLAHRHGKVTIVDAMSS-FGGIP---IDIAE--LHIDYL 185 (363)
T ss_pred HHHHHHHHhhCC-CccEEEEEeecCCccccCc----HHHHHHHHHHcCCEEEEEcccc-ccCcc---cchhh--cCccEE
Confidence 677888876432 3334444444566788877 8999999999999999999886 54322 22222 346776
Q ss_pred E--ecccccCCcceeEEEecHHHHHhch---------------------------h------------------------
Q psy11784 157 T--VGKPMGNGMPIGAVITSRKIAESLN---------------------------C------------------------ 183 (284)
Q Consensus 157 ~--~sK~l~~G~p~gav~~~~~i~~~~~---------------------------~------------------------ 183 (284)
+ ++|+++++..+|+++++++..+.+. .
T Consensus 186 ~~s~~K~l~~p~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~ 265 (363)
T TIGR02326 186 ISSANKCIQGVPGFGFVIARQAELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAAR 265 (363)
T ss_pred EecCccccccCCcceEEEECHHHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHH
Confidence 4 5699986556799999887765320 0
Q ss_pred hhhHHHHHHHHHHHHHhccCc------------eeEEEEeccc--HHHHHHHHHHHHCCcEEeecCCC-CCEEEEEcCCC
Q psy11784 184 LDDNRPSGKYLVRPLGINLHI------------FWCLILLSIT--YYLYRYTRRMKEAKIIVANEGEY-GNVLLFLPAMC 248 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~~G~------------~~~i~~~~~~--~~~~~~~~~l~~~Gv~~~~~~~~-~~~lr~~p~l~ 248 (284)
.++.+++.+++++.|+++ |+ +..+.+ +.. .....+.+.|.++||.+.++... .+.+|+.+...
T Consensus 266 ~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~L~~~gi~v~~g~~~~~~~iRi~~~~~ 343 (363)
T TIGR02326 266 HQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYS-PEDPDYRFADFYQRLKEQGFVIYPGKVSQVDCFRIGNIGE 343 (363)
T ss_pred HHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEEC-CCCCCCCHHHHHHHHHHCCEEEECCcCCCCCEEEEecCCC
Confidence 124555666677777664 32 122333 221 24567889999999999876432 47899987667
Q ss_pred CCHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIF 265 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l 265 (284)
++.++++.+++.|++++
T Consensus 344 ~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 344 VDAADITRLLTAIGKAM 360 (363)
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 89999999999998875
No 173
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.43 E-value=8.7e-11 Score=112.07 Aligned_cols=190 Identities=13% Similarity=0.117 Sum_probs=124.7
Q ss_pred HHHHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc-c---c
Q psy11784 77 AQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ-T---Q 149 (284)
Q Consensus 77 ~~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~-~---~ 149 (284)
.+.+++.++ +...++.+|++-.-+.-.|. ..+++.+++|.++|++||+++|.||+|..+-..+..+-+.. . +
T Consensus 183 ~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~-~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~ 261 (496)
T PLN02376 183 VDAADWAYKKAQESNKKVKGLILTNPSNPLGT-MLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDV 261 (496)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhhccc
Confidence 455554433 12345776665433555665 56899999999999999999999999987633342121111 1 1
Q ss_pred C---CCCcE----EEeccccc-CCcceeEEEec-HHHHHhchh--------------------------------hhhHH
Q psy11784 150 G---AVPDI----ITVGKPMG-NGMPIGAVITS-RKIAESLNC--------------------------------LDDNR 188 (284)
Q Consensus 150 g---~~pDi----v~~sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------------------l~~~~ 188 (284)
+ ..|+. .+|||.++ .|+++|++++. +.+.+.+.. .++++
T Consensus 262 ~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~l~~~~~~~~~~~~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~ 341 (496)
T PLN02376 262 DISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDSVVSCARKMSSFGLVSSQTQLMLASMLSDDQFVDNFLMESSRRLG 341 (496)
T ss_pred cccccCCCeEEEEEeccccCCCCcceEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCChhHHHHHHHHHHHHHH
Confidence 1 12442 37899997 79999999994 555554322 11334
Q ss_pred HHHHHHHHHHHhc--------cCceeEEEEecc----c--HHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCC
Q psy11784 189 PSGKYLVRPLGIN--------LHIFWCLILLSI----T--YYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCL 249 (284)
Q Consensus 189 ~~~~~l~~~L~~~--------~G~~~~i~~~~~----~--~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~ 249 (284)
++.+.+.+.|++. .|+++++++.+. . +...++++.+.+ .||.+.|+..+ .+++|++... .
T Consensus 342 ~r~~~l~~~L~~~gi~~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~-~ 420 (496)
T PLN02376 342 IRHKVFTTGIKKADIACLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN-M 420 (496)
T ss_pred HHHHHHHHHHHHCCCcccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC-C
Confidence 4555566666643 568888888411 0 123568888886 59999997544 3689996542 5
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q psy11784 250 TTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~ 268 (284)
+++++++++++|.+++.+-
T Consensus 421 ~~~~l~~al~rl~~~l~~~ 439 (496)
T PLN02376 421 DDDTLHVALGRIQDFVSKN 439 (496)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 7899999999999998653
No 174
>PRK08363 alanine aminotransferase; Validated
Probab=99.43 E-value=3.5e-11 Score=111.83 Aligned_cols=184 Identities=11% Similarity=0.042 Sum_probs=114.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI- 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi- 155 (284)
.+.+++.+. +++.+|++...++..|. ..+.+.+++|.++|++||+++|.||+|..+-..+. ........-...+
T Consensus 156 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi 230 (398)
T PRK08363 156 IDDIRKKIT---EKTKAIAVINPNNPTGA-LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVI 230 (398)
T ss_pred HHHHHhhCC---cceEEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEE
Confidence 455666553 34555555433555665 44788999999999999999999999986532332 1111111111223
Q ss_pred --EEeccccc-CCcceeEEEe--cHHHHHhchh----------------------------------hhhHHHHHHHHHH
Q psy11784 156 --ITVGKPMG-NGMPIGAVIT--SRKIAESLNC----------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~--~~~i~~~~~~----------------------------------l~~~~~~~~~l~~ 196 (284)
-+|||.++ .|+++|++++ ++++++.+.. .++++++.+++.+
T Consensus 231 ~~~SfSK~~~~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~ 310 (398)
T PRK08363 231 VMNGLSKVYFATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYK 310 (398)
T ss_pred EEecchhccCCccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHH
Confidence 37899964 6899999997 5543332110 1245555566666
Q ss_pred HHHhc---------cCceeEEEEecc-cHHHHHHH-HHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 197 PLGIN---------LHIFWCLILLSI-TYYLYRYT-RRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 197 ~L~~~---------~G~~~~i~~~~~-~~~~~~~~-~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.|+++ .|+++++.+.+. .....+++ +.|.++||.+.++..+ .+++|++. ..+++++++++++|
T Consensus 311 ~L~~~~~~~~~~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~--~~~~~~l~~~l~~l 388 (398)
T PRK08363 311 RLNEIPGISTTKPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF--LPPVEILEEAMDRF 388 (398)
T ss_pred HHhcCCCCEecCCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe--cCCHHHHHHHHHHH
Confidence 66553 233344444211 11234454 4567899999987543 36899974 56889999999999
Q ss_pred HHHHHH
Q psy11784 262 NRIFTS 267 (284)
Q Consensus 262 ~~~l~~ 267 (284)
.+++++
T Consensus 389 ~~~~~~ 394 (398)
T PRK08363 389 EEFMRE 394 (398)
T ss_pred HHHHHH
Confidence 988765
No 175
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.43 E-value=1.2e-11 Score=113.34 Aligned_cols=169 Identities=11% Similarity=0.070 Sum_probs=115.5
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE--EEeccccc-CC
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI--ITVGKPMG-NG 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi--v~~sK~l~-~G 165 (284)
+++.+|++...++-.|. ..+.+.+++|.++|++||+++|+||+|..|-..+...... .......+ .++||.++ .|
T Consensus 141 ~~~k~v~l~~p~NPTG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G 218 (356)
T PRK08056 141 PDLDCLFLCTPNNPTGL-LPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ-LADNPHLWVLRSLTKFYAIPG 218 (356)
T ss_pred CCCCEEEEeCCcCCCCC-CCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH-hccCCCEEEEEechhhccCcc
Confidence 45666666544666777 6689999999999999999999999998874333201111 11111223 36899999 79
Q ss_pred cceeEEEec-HHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------cCceeEE
Q psy11784 166 MPIGAVITS-RKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--------LHIFWCL 208 (284)
Q Consensus 166 ~p~gav~~~-~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~i 208 (284)
+++|+++++ +++++.+.. .+.++++.+++.+.|+++ .|.++++
T Consensus 219 ~RiG~~v~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~~~ 298 (356)
T PRK08056 219 LRLGYLVNSDDAAVARMRRQQMPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVWPGRANYLFL 298 (356)
T ss_pred hhheeeecCCHHHHHHHHHhCCCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCCCcEEEE
Confidence 999999984 566555533 123455666677777654 3445555
Q ss_pred EEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 209 ILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 209 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.+. . ...++++.|+++||.+.++..+ .+++|++. .++++.+.+++.|++++
T Consensus 299 ~~~-~--~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~---~~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 299 RCE-R--PDIDLQRALLTQRILIRSCANYPGLDSRYYRVAI---RSAAENERLLAALRNVL 353 (356)
T ss_pred EcC-C--ChHHHHHHHHHCCeEEEECCCCCCCCCCEEEEEE---cCHHHHHHHHHHHHHHH
Confidence 552 1 2467899999999999987543 36899973 37889999998888764
No 176
>PRK07337 aminotransferase; Validated
Probab=99.43 E-value=3.9e-11 Score=111.09 Aligned_cols=180 Identities=14% Similarity=0.164 Sum_probs=121.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++...+...|. ..+.+.+++|.++|++||+++|+||++.+|...+. .... ....++++
T Consensus 153 ~~~l~~~~~---~~~~~v~l~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~--~~~~~~vi 225 (388)
T PRK07337 153 AADVEAAWG---ERTRGVLLASPSNPTGT-SIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAA-PVSA--LSLGDDVI 225 (388)
T ss_pred HHHHHhhcC---ccceEEEEECCCCCCCc-CcCHHHHHHHHHHHHHCCCEEEEeccccccccCCC-CcCh--hhccCCEE
Confidence 456666554 34555555333455664 56889999999999999999999999987754332 1111 12234554
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
++||.++ .|+++|++++++++++.+.. .+.++++.+++.+.|++
T Consensus 226 ~~~S~SK~~~~~G~RiG~~~~~~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~ 305 (388)
T PRK07337 226 TINSFSKYFNMTGWRLGWLVVPEALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALES 305 (388)
T ss_pred EEEechhhcCCchhheeeeecCHHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6799997 68999999999988776643 11344555566666655
Q ss_pred c---------cCceeEEEEec----ccHHHHHHHHHHH-HCCcEEeecCCC-----CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 201 N---------LHIFWCLILLS----ITYYLYRYTRRMK-EAKIIVANEGEY-----GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 201 ~---------~G~~~~i~~~~----~~~~~~~~~~~l~-~~Gv~~~~~~~~-----~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
. .|+++++++.. ......++++.++ ++||.+.|+..+ .+++|++.. .+++++.+++++|
T Consensus 306 ~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~--~~~~~l~~~l~rl 383 (388)
T PRK07337 306 LGFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYA--TSMSRLEEAVARL 383 (388)
T ss_pred cCCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEec--CCHHHHHHHHHHH
Confidence 3 35566776631 1124567777754 789999886433 368999755 4789999999999
Q ss_pred HHHH
Q psy11784 262 NRIF 265 (284)
Q Consensus 262 ~~~l 265 (284)
.+++
T Consensus 384 ~~~l 387 (388)
T PRK07337 384 GKLF 387 (388)
T ss_pred HHHh
Confidence 8764
No 177
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.42 E-value=3.1e-11 Score=112.47 Aligned_cols=177 Identities=16% Similarity=0.167 Sum_probs=111.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--ccccccc-cCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQT-QGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~~-~g~~p 153 (284)
.+.+++.+++..++..++++-.-++-.|. ..+++.+++|.++|++||+++|.||+|..|-..+. ....... ....+
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 241 (404)
T PTZ00376 163 FDGMLEDLRTAPNGSVVLLHACAHNPTGV-DPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGV 241 (404)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCC
Confidence 56777777643333445555555666676 55999999999999999999999999988743220 0001111 11112
Q ss_pred cE---EEeccccc-CCcceeEE---EecHHHHH----hchh--------------------hh-----------------
Q psy11784 154 DI---ITVGKPMG-NGMPIGAV---ITSRKIAE----SLNC--------------------LD----------------- 185 (284)
Q Consensus 154 Di---v~~sK~l~-~G~p~gav---~~~~~i~~----~~~~--------------------l~----------------- 185 (284)
.+ .+|||.++ .|+++|++ ++++++.+ .+.. ++
T Consensus 242 ~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 321 (404)
T PTZ00376 242 EFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSG 321 (404)
T ss_pred cEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 33 37899999 79999998 46765433 2211 11
Q ss_pred hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHHHC-CcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 186 DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMKEA-KIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
+++++.+.+.+.|++. .|++.++.+ ..++++.|.++ ||++.|+ + |++.+. ++++
T Consensus 322 ~~~~~r~~l~~~L~~~~~~~~~~~~~p~gg~f~~~~~------~~~~~~~L~~~~~v~v~p~----~--Ris~~~-~~~~ 388 (404)
T PTZ00376 322 RIQNMRQLLYDELKALGSPGDWEHIINQIGMFSFTGL------TKEQVERLIEKYHIYLLDN----G--RISVAG-LTSK 388 (404)
T ss_pred HHHHHHHHHHHHHHhcCCCCcccccccCceEEEecCC------CHHHHHHHHHhCCEeecCC----C--eEEEec-cCHH
Confidence 2234445555555542 112222222 24688888876 9999874 2 776432 7999
Q ss_pred HHHHHHHHHHHHHHH
Q psy11784 253 NVLFIVSTLNRIFTS 267 (284)
Q Consensus 253 ~id~~~~~l~~~l~~ 267 (284)
+++.++++|++++..
T Consensus 389 ~~~~~~~~l~~~~~~ 403 (404)
T PTZ00376 389 NVDYVAEAIHDVVRN 403 (404)
T ss_pred hHHHHHHHHHHHHhc
Confidence 999999999988653
No 178
>PRK06855 aminotransferase; Validated
Probab=99.42 E-value=6.8e-11 Score=111.14 Aligned_cols=187 Identities=16% Similarity=0.110 Sum_probs=120.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.++|++.+......-+.++..| ++-.|. ..+++.+++|.++|++||+++|.||+|..+-..+...-... .+.+|
T Consensus 159 ~~~l~~~~~~~~~~~~i~l~~P-~NPTG~-~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~--~~~~~~~ 234 (433)
T PRK06855 159 LDDLENKVKYNPSIAGILLINP-DNPTGA-VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLS--EVIGDVP 234 (433)
T ss_pred HHHHHHHHhcCCCceEEEEECC-CCCCCc-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHH--HHcCcCC
Confidence 5778877753222234456667 555665 67999999999999999999999999998743342111111 11122
Q ss_pred ---EEEeccccc-CCcceeEEEec-----H---HHHHhchh--------------------------------hhhHHHH
Q psy11784 155 ---IITVGKPMG-NGMPIGAVITS-----R---KIAESLNC--------------------------------LDDNRPS 190 (284)
Q Consensus 155 ---iv~~sK~l~-~G~p~gav~~~-----~---~i~~~~~~--------------------------------l~~~~~~ 190 (284)
+-+|||.++ .|+++|+++++ + ++++.+.. .+.++++
T Consensus 235 ~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r 314 (433)
T PRK06855 235 GIALKGISKELPWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKR 314 (433)
T ss_pred eEEEecCccccCCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHH
Confidence 236899997 79999999972 2 22222110 1134455
Q ss_pred HHHHHHHHHhc---------cCceeEEEEeccc--------------------------HHHHHHHHH-HHHCCcEEeec
Q psy11784 191 GKYLVRPLGIN---------LHIFWCLILLSIT--------------------------YYLYRYTRR-MKEAKIIVANE 234 (284)
Q Consensus 191 ~~~l~~~L~~~---------~G~~~~i~~~~~~--------------------------~~~~~~~~~-l~~~Gv~~~~~ 234 (284)
.+.+.+.|++. .|+++++.+.+.. ....+++.. +.++||.+.|+
T Consensus 315 ~~~~~~~L~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG 394 (433)
T PRK06855 315 SNIAYEKLKDVPGLKVNRTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPL 394 (433)
T ss_pred HHHHHHHHhcCCCeeccCCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecC
Confidence 55666666543 3456676663110 013455544 55789999998
Q ss_pred CCCC---CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 235 GEYG---NVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 235 ~~~~---~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
..++ +.+|++... .++++|++++++|.+++++.
T Consensus 395 ~~F~~~~~~~Rls~~~-~~~~~i~~~~~~l~~~~~~~ 430 (433)
T PRK06855 395 SSFCTELNGFRVTLLE-RDEEKFEWIYQTLAEKIEEY 430 (433)
T ss_pred CcCCCCCCceEEEECC-CcHHHHHHHHHHHHHHHHHH
Confidence 5543 468997644 48999999999999998753
No 179
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.42 E-value=4.1e-11 Score=111.23 Aligned_cols=175 Identities=18% Similarity=0.173 Sum_probs=131.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.++.++. +++..|.+.-+.+..|.+.| +++|.++|+++|+++++|=+|+ . |. .-.+...+..|++
T Consensus 152 ~~~~~~~i~---~~Tklvais~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~---~h--~~idv~~l~~Df~ 218 (405)
T COG0520 152 LDALEKLIT---PKTKLVALSHVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-A---GH--LPIDVQELGCDFL 218 (405)
T ss_pred HHHHHHhcC---CCceEEEEECccccccccch----HHHHHHHHHHcCCEEEEECccc-c---Cc--cCCCchhcCCCEE
Confidence 456666443 66889999999999999999 9999999999999999999986 3 21 2333344568999
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhchh---------------------------------------------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~~--------------------------------------------------- 183 (284)
+|| |++.|-..+|.+.+++++.+.+.+
T Consensus 219 afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~ 298 (405)
T COG0520 219 AFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGM 298 (405)
T ss_pred EEcccccccCCCceEEEEEchHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhH
Confidence 887 988876679999999999988743
Q ss_pred ---hhhHHHHHHHHHHHHHhc-----c-------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CC
Q psy11784 184 ---LDDNRPSGKYLVRPLGIN-----L-------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YG 238 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~-----~-------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~ 238 (284)
.++.+++.+++.+.|+++ . +.++.+.+. ......++..|.++||.++.+.. ..
T Consensus 299 ~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~--~~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~ 376 (405)
T COG0520 299 EAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVK--GIHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVD 376 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeC--CCCHHHHHHHHHhCCeEEEeccccccHHHHhcCCC
Confidence 125556667777777766 1 223333332 23467899999999988876421 12
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
..+|+++.+..|++|||++++.|+++.+
T Consensus 377 ~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 377 ATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 3499999999999999999999988764
No 180
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.42 E-value=1.6e-11 Score=111.71 Aligned_cols=165 Identities=16% Similarity=0.121 Sum_probs=119.6
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-CCcc
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-NGMP 167 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~G~p 167 (284)
..++..| .+-.|. ..+.+.++++.+.|++++.++|+||+|..|... ...... .+ .+++ -+|||.++ .|++
T Consensus 133 ~v~l~nP-nNPTG~-~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~-~s~~~~--~~-~~~vi~l~SfSK~~gl~GlR 206 (339)
T PRK06959 133 HLIVVNP-NNPTAE-RLPAARLLRWHAQLAARGGTLIVDEAFADTLPA-ASLAAH--TD-RPGLVVLRSVGKFFGLAGVR 206 (339)
T ss_pred EEEEeCC-CCCCCC-CCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc-ccchhc--cC-CCCEEEEecChhhcCCcchh
Confidence 4577788 455675 457888999999999999999999999877321 111111 11 2333 37899998 8999
Q ss_pred eeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc------cCceeEEEEecc
Q psy11784 168 IGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN------LHIFWCLILLSI 213 (284)
Q Consensus 168 ~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~------~G~~~~i~~~~~ 213 (284)
+|++++++++++.+.. .+.+++..+++.+.|+++ .++++++.+ +
T Consensus 207 iGy~v~~~~li~~l~~~~~~~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~f~~~~~-~- 284 (339)
T PRK06959 207 AGFVLAAPALLAALRDALGAWTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHGFAVHATPLFSWTDD-P- 284 (339)
T ss_pred eEEEecCHHHHHHHHHhcCCCCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCCCCccCcceEEEEeC-C-
Confidence 9999999999887755 235666677788888774 233444443 2
Q ss_pred cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 214 TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 214 ~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.++.+.|.++||+++..+ ..+++|++ +..+++|.+.+++.|+++++.+.
T Consensus 285 --~~~~l~~~l~~~GI~vr~~~-~~~~lRis--i~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 285 --RAAALHAALARRGIWTRYFA-PPPSVRFG--LPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --CHHHHHHHHHhCCeEEEECC-CCCeEEEE--CCCCHHHHHHHHHHHHHHHHHHh
Confidence 35678999999999998653 24689996 44578999999999998887764
No 181
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.42 E-value=1.4e-11 Score=111.87 Aligned_cols=182 Identities=17% Similarity=0.097 Sum_probs=112.0
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.+.. .+..+.+|++.-.....|...+ +++|.++|++||+++++|++|.++..... .......++ .
T Consensus 132 ~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~----~~~i~~~~~~~~~~l~vD~a~~~~~~~~~-~~~~~~~~~~~ 206 (345)
T cd06450 132 PEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP----LEEIADLAEKYDLWLHVDAAYGGFLLPFP-EPRHLDFGIER 206 (345)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC----HHHHHHHHHHhCCeEEEechhhHHHhhCh-hhHHHhcCccc
Confidence 5777777763 1223455554433445676655 99999999999999999999975421111 000001111 3
Q ss_pred CcEE--EecccccCCcceeEEEecH----HHHHhchh------hhhHHHHHHHHHHHHHhccCc---------eeEEEEe
Q psy11784 153 PDII--TVGKPMGNGMPIGAVITSR----KIAESLNC------LDDNRPSGKYLVRPLGINLHI---------FWCLILL 211 (284)
Q Consensus 153 pDiv--~~sK~l~~G~p~gav~~~~----~i~~~~~~------l~~~~~~~~~l~~~L~~~~G~---------~~~i~~~ 211 (284)
.|.+ +++|.+++++..|+++.+. ..++.+.. +++..++.+++.+.|+++.|. ++.+.+.
T Consensus 207 ~d~~~~s~~K~l~~p~g~g~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv~f~~~ 286 (345)
T cd06450 207 VDSISVDPHKYGLVPLGCSAVLVRALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLK 286 (345)
T ss_pred cCEEEEchhHhhCCCcchHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEEEEEEC
Confidence 5654 5679887766777765551 00111111 456777888888888775222 2333332
Q ss_pred cc---cHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCC-CHHHHHHHHHHHHH
Q psy11784 212 SI---TYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCL-TTENVLFIVSTLNR 263 (284)
Q Consensus 212 ~~---~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~-t~~~id~~~~~l~~ 263 (284)
+. .....++.+.|.++|+++.+... ....+|+++...+ |++|+|++++.|++
T Consensus 287 ~~~~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 287 PSVKLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CcchhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 21 23566899999999665543221 3568999998765 99999999999865
No 182
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.42 E-value=8e-11 Score=110.59 Aligned_cols=188 Identities=16% Similarity=0.162 Sum_probs=118.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++++++++ ....+.+++.| .+..|. +.+.+.+++|.++|++||+++|+||+|..|-..+..+.....++-...++
T Consensus 180 ~~~l~~~~~--~~~~~i~i~~P-~NPtG~-v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi 255 (430)
T PLN00145 180 LEGVEALAD--ENTVAMVIINP-NNPCGS-VYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVL 255 (430)
T ss_pred HHHHHHHhC--cCceEEEEeCC-CCCCCC-CCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEE
Confidence 567777664 22355666777 455665 66899999999999999999999999987633232111111111122233
Q ss_pred ---Eeccccc-CCcceeEEEec--HHHHH------hchh-------------------------------hhhHHHHHHH
Q psy11784 157 ---TVGKPMG-NGMPIGAVITS--RKIAE------SLNC-------------------------------LDDNRPSGKY 193 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~--~~i~~------~~~~-------------------------------l~~~~~~~~~ 193 (284)
+|||..+ .|+++|++++. +.+++ .+.. .+.++++.+.
T Consensus 256 ~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 335 (430)
T PLN00145 256 TLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETADI 335 (430)
T ss_pred EEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 6899954 69999999973 32221 1110 1234445555
Q ss_pred HHHHHHhc----------cCceeEEEEec----ccHHHHHHHHHHH-HCCcEEeecCCCC--CEEEEEcCCCCCHHHHHH
Q psy11784 194 LVRPLGIN----------LHIFWCLILLS----ITYYLYRYTRRMK-EAKIIVANEGEYG--NVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 194 l~~~L~~~----------~G~~~~i~~~~----~~~~~~~~~~~l~-~~Gv~~~~~~~~~--~~lr~~p~l~~t~~~id~ 256 (284)
+.+.|+++ .|+++++.+.. .......++..++ ++||++.|+..++ +++||+.. .+++++++
T Consensus 336 ~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~--~~~~~l~~ 413 (430)
T PLN00145 336 CYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFA--IDPPSLED 413 (430)
T ss_pred HHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC--CCHHHHHH
Confidence 66666553 23444555521 1113456776555 6799999875443 79999754 58999999
Q ss_pred HHHHHHHHHHHHhh
Q psy11784 257 IVSTLNRIFTSLQM 270 (284)
Q Consensus 257 ~~~~l~~~l~~~~~ 270 (284)
++++|.+++.+..+
T Consensus 414 al~rl~~~~~~~~~ 427 (430)
T PLN00145 414 GLERLKSFCLRHAK 427 (430)
T ss_pred HHHHHHHHHHHhcc
Confidence 99999999977543
No 183
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.42 E-value=4.8e-11 Score=111.58 Aligned_cols=178 Identities=12% Similarity=0.074 Sum_probs=113.3
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++.. ...+|++ +++.|+.+ + +++|.++|++||++||+|++|+ +|-.+. +......+ ..|+
T Consensus 157 ~~~le~~l~~~--~~klVi~~~~~~g~~~---d----l~~l~~la~~~g~~livD~Aha-~G~~~~-g~~~~~~~-~~Di 224 (416)
T PRK13034 157 YDEVEELAKEH--KPKLIIAGFSAYPREL---D----FARFREIADEVGALLMVDMAHI-AGLVAA-GEHPNPFP-HAHV 224 (416)
T ss_pred HHHHHHHHhhc--CCeEEEECCCcccccc---C----HHHHHHHHHHcCCEEEEeCccc-ccCccc-CCCCCCCC-CceE
Confidence 56777777532 3467777 57665433 3 8899999999999999999996 444443 11111111 3676
Q ss_pred E--EecccccCCcceeEEEecHH-HHHhchh---------------------------------hhhHHHHHHHHHHHHH
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRK-IAESLNC---------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~-i~~~~~~---------------------------------l~~~~~~~~~l~~~L~ 199 (284)
+ +++|+++|+. .|+++++++ +.+.+.. .+++.++.++|++.|+
T Consensus 225 ~~~s~~K~l~g~~-GG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~ 303 (416)
T PRK13034 225 VTTTTHKTLRGPR-GGMILTNDEEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLK 303 (416)
T ss_pred EEEeCcccCCCCC-CeEEEECcHHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHH
Confidence 6 5679996532 366666543 3332221 1355566778888887
Q ss_pred hccCce----------eEEEEecccHHHHHHHHHHHHCCcEEeecC-------C-CCCEEEEEcCC----CCCHHHHHHH
Q psy11784 200 INLHIF----------WCLILLSITYYLYRYTRRMKEAKIIVANEG-------E-YGNVLLFLPAM----CLTTENVLFI 257 (284)
Q Consensus 200 ~~~G~~----------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~-~~~~lr~~p~l----~~t~~~id~~ 257 (284)
++ |+- ..+.+.........+.+.|.++||++.+.+ + ....||+.++. .++++|++++
T Consensus 304 ~~-G~~~~~~~~~t~i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l 382 (416)
T PRK13034 304 ER-GYDLVSGGTDNHLLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREI 382 (416)
T ss_pred Hc-CCEeccCCCCCcEEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHH
Confidence 64 432 222221112234556688888999997421 1 23579999888 7889999999
Q ss_pred HHHHHHHHHHH
Q psy11784 258 VSTLNRIFTSL 268 (284)
Q Consensus 258 ~~~l~~~l~~~ 268 (284)
++.|.+++...
T Consensus 383 ~~~l~~~~~~~ 393 (416)
T PRK13034 383 ANWILDVLDDL 393 (416)
T ss_pred HHHHHHHHhcC
Confidence 99999998743
No 184
>PRK03321 putative aminotransferase; Provisional
Probab=99.41 E-value=4.1e-12 Score=116.04 Aligned_cols=175 Identities=15% Similarity=0.108 Sum_probs=118.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
++.+++.++ +++.+|++...++..|.+.+ .+++.++|++ +|+++|+||+|..|...+............++
T Consensus 135 ~~~l~~~~~---~~~~~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~ 207 (352)
T PRK03321 135 LDAMAAAIT---DRTRLIFVCNPNNPTGTVVT----PAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPN 207 (352)
T ss_pred HHHHHHhhc---cCCCEEEEeCCCCCcCCCcC----HHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCC
Confidence 566666664 34566666655777787765 4556666655 69999999999877443321111222222355
Q ss_pred EE---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 155 II---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 155 iv---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
++ +|||.++ .|+++|++++++++++.+.. ++++.+..+++.+.|++.
T Consensus 208 vi~~~S~SK~~g~~GlRiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~ 287 (352)
T PRK03321 208 VVVLRTFSKAYGLAGLRVGYAVGHPEVIAALRKVAVPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG 287 (352)
T ss_pred EEEEecchHHhhhHHHhhhhhcCCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 55 6899998 69999999999999887654 113333445566666553
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.|.++++.+. .....+++.|.++||++.+. ..+.||+.. .++++.++++++|++++.
T Consensus 288 ~~~~~~~g~~i~i~l~---~~~~~~~~~l~~~gI~v~~~--~~~~iRi~~---~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 288 WTVPPSQANFVWLPLG---ERTADFAAAAAEAGVVVRPF--AGEGVRVTI---GAPEENDAFLRAARAWRA 350 (352)
T ss_pred CccCCCCCCEEEEeCC---CCHHHHHHHHHHCCEEEEcc--CCCcEEEee---CCHHHHHHHHHHHHHHhc
Confidence 4566666652 23678999999999999873 245799973 589999999999988754
No 185
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.41 E-value=7.9e-11 Score=109.89 Aligned_cols=186 Identities=18% Similarity=0.119 Sum_probs=116.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI- 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi- 155 (284)
.+++++.++ ....+.+++.| ++-.|. ..+.+.+++|.++|++|++++|.||+|..|-..+...-....+.-.+.+
T Consensus 160 ~~~l~~~~~--~~~~~~~~~nP-~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi 235 (409)
T PLN00143 160 LDAVEAIAD--ENTIAMVIINP-GNPCGS-VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVI 235 (409)
T ss_pred HHHHHHhcc--cCCEEEEEECC-CCCCCC-ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEE
Confidence 566776654 22355667777 555665 5589999999999999999999999999874333211111111111222
Q ss_pred --EEeccccc-CCcceeEEEec-H-HH------HHhchh-------------------h------------hhHHHHHHH
Q psy11784 156 --ITVGKPMG-NGMPIGAVITS-R-KI------AESLNC-------------------L------------DDNRPSGKY 193 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~~-~-~i------~~~~~~-------------------l------------~~~~~~~~~ 193 (284)
-+|||.++ .|+++|+++++ + .+ .+.+.. + +.+++..++
T Consensus 236 ~~~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (409)
T PLN00143 236 TLGSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAF 315 (409)
T ss_pred EEccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHH
Confidence 36899955 68999999983 2 22 221111 1 123333334
Q ss_pred HHHHHHhc----------cCceeEEEEec---cc-HHHHHHHH-HHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHH
Q psy11784 194 LVRPLGIN----------LHIFWCLILLS---IT-YYLYRYTR-RMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 194 l~~~L~~~----------~G~~~~i~~~~---~~-~~~~~~~~-~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~ 256 (284)
+.+.|+++ .|+++++.+.. .. ....+++. .+.++||++.|+..+ .+++|++. ..+++++++
T Consensus 316 ~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~--~~~~~~l~~ 393 (409)
T PLN00143 316 CYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITF--AVEQSSLED 393 (409)
T ss_pred HHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE--cCCHHHHHH
Confidence 44444432 24566666631 01 13455654 446889999987644 47899965 457999999
Q ss_pred HHHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTSL 268 (284)
Q Consensus 257 ~~~~l~~~l~~~ 268 (284)
++++|.+++++.
T Consensus 394 al~rl~~~l~~~ 405 (409)
T PLN00143 394 GLGRLKSFCGRH 405 (409)
T ss_pred HHHHHHHHHHHh
Confidence 999999988754
No 186
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.41 E-value=3.9e-11 Score=110.35 Aligned_cols=220 Identities=17% Similarity=0.147 Sum_probs=147.3
Q ss_pred cHHHHHHHHHHH-ccCCccEEEEcCCCcccchhhhcCC-CCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHH
Q psy11784 2 EANDLALQLARA-YTGRQNIVVVDAAYHGTVNLLLDIS-PRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQA 79 (284)
Q Consensus 2 eA~e~AlklAr~-~~~r~~il~~~~~yHG~t~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (284)
+|++.++.-.+. .....+|+.....|++......... ..... +..+|.+.. .. . + .++
T Consensus 72 ~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~--------v~~i~~~~~--~~-~-~--------~~~ 131 (371)
T PF00266_consen 72 EALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAE--------VRVIPADPG--GS-L-D--------LED 131 (371)
T ss_dssp HHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEE--------EEEEEEGTT--SS-C-S--------HHH
T ss_pred hhhhhhhhccccccccccccccccccccccccccccccccchhh--------hcccccccc--ch-h-h--------hhh
Confidence 345555554432 4556788888888888763322221 00000 112232110 00 1 1 577
Q ss_pred HHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec
Q psy11784 80 ARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 80 l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
+++.+. +++..|.+--+....|...| +++|.++|+++|+++++|=+|+ +|.. -.+.....+|++++|
T Consensus 132 ~~~~l~---~~~~lv~~~~~~~~tG~~~p----i~~I~~~~~~~~~~~~vD~~~~-~g~~-----~id~~~~~~D~~~~s 198 (371)
T PF00266_consen 132 LEEALN---PDTRLVSISHVENSTGVRNP----IEEIAKLAHEYGALLVVDAAQS-AGCV-----PIDLDELGADFLVFS 198 (371)
T ss_dssp HHHHHH---TTESEEEEESBETTTTBBSS----HHHHHHHHHHTTSEEEEE-TTT-TTTS-----S--TTTTTESEEEEE
T ss_pred hhhhhc---cccceEEeecccccccEEee----eceehhhhhccCCceeEechhc-cccc-----cccccccccceeeec
Confidence 888775 67888999999999999998 9999999999999999999886 4322 122233457988776
Q ss_pred --ccccCCcceeEEEecHHHHHhchh-----------------------------------------------------h
Q psy11784 160 --KPMGNGMPIGAVITSRKIAESLNC-----------------------------------------------------L 184 (284)
Q Consensus 160 --K~l~~G~p~gav~~~~~i~~~~~~-----------------------------------------------------l 184 (284)
| +.|+..+|++..+++..+.+.. .
T Consensus 199 ~~K-l~gp~G~g~l~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~ 277 (371)
T PF00266_consen 199 SHK-LGGPPGLGFLYVRPEAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIR 277 (371)
T ss_dssp STS-TTSSSTEEEEEEEHHHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccc-cCCCCchhhheehhhhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccch
Confidence 9 8887678999999988877632 1
Q ss_pred hhHHHHHHHHHHHHHhc-------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCC----------CEE
Q psy11784 185 DDNRPSGKYLVRPLGIN-------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYG----------NVL 241 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~-------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~----------~~l 241 (284)
++..++.+++++.|.++ .+.++.+.+. ......+.+.|.++||.+..+.... +.+
T Consensus 278 ~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~L~~~~I~~~~G~~~~~~~~~~~~~~~~i 355 (371)
T PF00266_consen 278 ERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLP--GSDADDVVKYLEERGIAVSTGSACAGPSLDILGMGGVI 355 (371)
T ss_dssp HHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEET--TSSHHHHHHHHHHHTEEEEESTTTCHHHHHHHHTTTEE
T ss_pred hhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeec--CCCHHHHHHHHhhcCEEEeccCcccHHHHHHhCCCCEE
Confidence 25566677777777775 2345555552 2346788999999999999843322 799
Q ss_pred EEEcCCCCCHHHHHHH
Q psy11784 242 LFLPAMCLTTENVLFI 257 (284)
Q Consensus 242 r~~p~l~~t~~~id~~ 257 (284)
|++++...|++|||++
T Consensus 356 RvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 356 RVSLHYYNTEEDVDRL 371 (371)
T ss_dssp EEE-GTTSSHHHHHHH
T ss_pred EEeccCCCCHHHHhhC
Confidence 9999999999999975
No 187
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.41 E-value=4.3e-11 Score=111.03 Aligned_cols=179 Identities=12% Similarity=0.017 Sum_probs=118.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-cccc----ccccCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWA----FQTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a----~~~~g~ 151 (284)
.+++++.+. .++.+|++..-++-.|. +.+.+.+++|.++|++||+++|.||+|..+...+. .... ....+.
T Consensus 155 ~~~l~~~~~---~~~k~i~l~~p~NPtG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 230 (393)
T TIGR03538 155 FDAVPESVW---RRCQLLFVCSPGNPTGA-VLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGR 230 (393)
T ss_pred HHHHHHHHh---hcceEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccc
Confidence 456666554 24566655433555676 56899999999999999999999999986633221 0101 111111
Q ss_pred --CCcE---EEeccccc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHH
Q psy11784 152 --VPDI---ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 152 --~pDi---v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~ 195 (284)
.+.+ -+|||.++ .|+++|++++++++++.+.. .+.++++.+.+.
T Consensus 231 ~~~~~vi~i~S~SK~~~~~GlRvG~~i~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 310 (393)
T TIGR03538 231 DDFRRCLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRYRTYHGCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVL 310 (393)
T ss_pred cccccEEEEecchhhcCCcccceEEEecCHHHHHHHHHHHHhhccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHH
Confidence 1223 37899865 68999999999988776543 113444455555
Q ss_pred HHHHhc-------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----------CCEEEEEcCCCCCHHHHHHH
Q psy11784 196 RPLGIN-------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----------GNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 196 ~~L~~~-------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----------~~~lr~~p~l~~t~~~id~~ 257 (284)
+.|++. .|+++++++ + ....++++.|+ ++||.+.|+..+ .+++|++. ..++++++++
T Consensus 311 ~~L~~~~~~~~p~gg~f~~~~~-~--~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~--~~~~~~l~~~ 385 (393)
T TIGR03538 311 EILGQVLDLELPDAGFYLWPKV-P--GDDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIAL--VAPLEECVEA 385 (393)
T ss_pred HHHHhhCcccCCCeeEEEEEEC-C--CCHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEe--cCCHHHHHHH
Confidence 555542 466777776 3 23467888876 579999887543 36889964 4579999999
Q ss_pred HHHHHHH
Q psy11784 258 VSTLNRI 264 (284)
Q Consensus 258 ~~~l~~~ 264 (284)
+++|.++
T Consensus 386 l~~l~~~ 392 (393)
T TIGR03538 386 AERIRSF 392 (393)
T ss_pred HHHHHHh
Confidence 9999764
No 188
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.40 E-value=5.9e-11 Score=110.57 Aligned_cols=174 Identities=19% Similarity=0.148 Sum_probs=119.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++..|++..+.+..|.+.+ +++|.++|+++|+++++|++|+ +|..- .... ...+|++
T Consensus 154 ~~~l~~~i~---~~t~lv~l~~~~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~---~~~~--~~~~D~~ 220 (406)
T PRK09295 154 LETLPALFD---ERTRLLAITHVSNVLGTENP----LAEMIALAHQHGAKVLVDGAQA-VMHHP---VDVQ--ALDCDFY 220 (406)
T ss_pred HHHHHHhcC---CCcEEEEEecchhcccccCC----HHHHHHHHHHcCCEEEEEcccc-cCccc---cCch--hcCCCEE
Confidence 566777664 45677888888888898887 8999999999999999999996 43321 1222 3457888
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhch----------------------------h-----------------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLN----------------------------C----------------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~----------------------------~----------------------- 183 (284)
++| |.+| ...+|++++++++.+.+. .
T Consensus 221 ~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~ 299 (406)
T PRK09295 221 VFSGHKLYG-PTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGL 299 (406)
T ss_pred EeehhhccC-CCCcEEEEEchHhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCH
Confidence 776 9554 224788988887754321 0
Q ss_pred ---hhhHHHHHHHHHHHHHhccC----------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CCCE
Q psy11784 184 ---LDDNRPSGKYLVRPLGINLH----------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YGNV 240 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~~G----------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~~~ 240 (284)
.++.+++.+++.+.|+++.| .++.+.+ + ......+.+.|.++||.++.+.. .++.
T Consensus 300 ~~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~-~-~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~~~~~ 377 (406)
T PRK09295 300 NNIAEYEQNLMHYALSQLESVPDLTLYGPQNRLGVIAFNL-G-KHHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAM 377 (406)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEE-C-CcCHHHHHHHHHhCCeEEeccccchHHHHHHHCCCCE
Confidence 12444566666777665411 1233333 2 12345677888899999975421 1357
Q ss_pred EEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 241 LLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 241 lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+|++|+...|++|||.+++.|+++..
T Consensus 378 iRiS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 378 CRASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988643
No 189
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.40 E-value=8.9e-12 Score=114.10 Aligned_cols=168 Identities=15% Similarity=0.161 Sum_probs=114.9
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEeccccc-CCcce
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMG-NGMPI 168 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~-~G~p~ 168 (284)
+..+|++...++..|... |.+.+++|.++|++ ++++|.||+|..|...+......+..+-..-+.+|||.++ .|+++
T Consensus 154 ~~k~i~l~~p~NPTG~~~-s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRi 231 (357)
T PRK14809 154 GERIVYLTSPHNPTGSEI-PLDEVEALAERTDE-ETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAYGLAGLRL 231 (357)
T ss_pred CCcEEEEeCCCCCCCcCC-CHHHHHHHHHhCcc-CcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHhcCcchhh
Confidence 345666666667677654 67778888888865 7899999999987543321111111111222447899998 79999
Q ss_pred eEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc----cCceeEEEEecccHH
Q psy11784 169 GAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN----LHIFWCLILLSITYY 216 (284)
Q Consensus 169 gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~----~G~~~~i~~~~~~~~ 216 (284)
|++++++++++.+.. .+.++++.+++.+.|... .|.++++.+. .
T Consensus 232 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~g~f~~~~~~----~ 307 (357)
T PRK14809 232 GYAVVPEEWADAYARVNTPFAASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPTWESAGNFVLAEVG----D 307 (357)
T ss_pred eeeecCHHHHHHHHHhCCCCCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCccCCCCCCEEEEECC----C
Confidence 999999998887654 113334444455555432 5677777762 2
Q ss_pred HHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
..++++.|.++||++.++..+ .+.+|++. . +++++++++++|.++++
T Consensus 308 ~~~~~~~l~~~gv~v~~g~~f~~~~~iRls~--~-~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 308 ASAVAEAAQERGVIVRDCTSFGLPECIRITC--G-TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHHCCEEEEECccCCCCCeEEEec--C-CHHHHHHHHHHHHHHhc
Confidence 567888899999999987654 36899973 3 68999999999988764
No 190
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.40 E-value=4.2e-11 Score=113.61 Aligned_cols=191 Identities=15% Similarity=0.174 Sum_probs=122.5
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-ccc---
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQ--- 149 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~--- 149 (284)
.+.+++.++. ...++.+|++-.-++-.|. .++++.+++|.++|++||+++|.||+|..+-..+..+-.. ...
T Consensus 175 ~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~-~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~ 253 (468)
T PLN02450 175 ESALEEAYQQAQKLNLKVKGVLITNPSNPLGT-TTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDR 253 (468)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEecCCCCCCc-ccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhc
Confidence 4556666542 2334665555432455665 5689999999999999999999999998753333211111 111
Q ss_pred ---CC-CCc----EEEeccccc-CCcceeEEEecHH-HHHhchh--------------------------------hhhH
Q psy11784 150 ---GA-VPD----IITVGKPMG-NGMPIGAVITSRK-IAESLNC--------------------------------LDDN 187 (284)
Q Consensus 150 ---g~-~pD----iv~~sK~l~-~G~p~gav~~~~~-i~~~~~~--------------------------------l~~~ 187 (284)
+. .++ +-+|||.++ .|+++|+++++++ +.+.+.. .+++
T Consensus 254 ~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l 333 (468)
T PLN02450 254 KLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVVSAATKMSSFGLVSSQTQYLLSALLSDKKFTKNYLEENQKRL 333 (468)
T ss_pred ccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHHHHHHHHhhcCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHH
Confidence 11 122 347899998 8999999999744 4443322 1133
Q ss_pred HHHHHHHHHHHHhc--------cCceeEEEEec---cc--HHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCC
Q psy11784 188 RPSGKYLVRPLGIN--------LHIFWCLILLS---IT--YYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCL 249 (284)
Q Consensus 188 ~~~~~~l~~~L~~~--------~G~~~~i~~~~---~~--~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~ 249 (284)
+++.+.+.+.|++. .|+++++.+.. .. ....++++.++ ++||.+.|+..+ .+++|++... .
T Consensus 334 ~~rr~~l~~~L~~~gi~~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~-~ 412 (468)
T PLN02450 334 KQRQKKLVSGLEAAGIKCLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN-M 412 (468)
T ss_pred HHHHHHHHHHHHHcCCcccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC-C
Confidence 34444555555543 46677777631 11 12345677776 579999987543 4689996443 4
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q psy11784 250 TTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~ 269 (284)
+++++++++++|.+++.+..
T Consensus 413 ~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 413 SEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred CHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999998766
No 191
>PLN02656 tyrosine transaminase
Probab=99.40 E-value=1.7e-10 Score=107.63 Aligned_cols=187 Identities=16% Similarity=0.118 Sum_probs=118.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.+.+++.+. ....+.+++.| ++-.|. .++++.+++|.++|++||+++|+||+|..|-..++.+-....++-...
T Consensus 159 ~~~l~~~~~--~~~~~v~l~~P-~NPtG~-~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 234 (409)
T PLN02656 159 LDAVEALAD--QNTVALVIINP-GNPCGN-VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVL 234 (409)
T ss_pred HHHHHHHhc--cCceEEEEECC-CCCCCC-CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEE
Confidence 566666664 22345556666 445565 458889999999999999999999999977433421111111111111
Q ss_pred -EEEeccccc-CCcceeEEEec--------HHHHHhchh-------------------h------------hhHHHHHHH
Q psy11784 155 -IITVGKPMG-NGMPIGAVITS--------RKIAESLNC-------------------L------------DDNRPSGKY 193 (284)
Q Consensus 155 -iv~~sK~l~-~G~p~gav~~~--------~~i~~~~~~-------------------l------------~~~~~~~~~ 193 (284)
+-+|||.++ .|+++|+++++ +++++.+.. + +.++++.+.
T Consensus 235 ~~~SfSK~f~~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~ 314 (409)
T PLN02656 235 TLGSLSKRWIVPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDI 314 (409)
T ss_pred EEcccchhccCcceeEEEEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 236899954 68999999983 456554432 1 134444555
Q ss_pred HHHHHHhc----------cCceeEEEEecc----cHHHHH-HHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHH
Q psy11784 194 LVRPLGIN----------LHIFWCLILLSI----TYYLYR-YTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 194 l~~~L~~~----------~G~~~~i~~~~~----~~~~~~-~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~ 256 (284)
+.+.|+++ .|+++++.+... ...... +.+.|.++||++.|+..+ .+++|++.. .+++++++
T Consensus 315 ~~~~L~~~~~~~~~~~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~--~~~e~l~e 392 (409)
T PLN02656 315 CCDRIKEIPCITCPHKPEGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFA--ADPSSLEE 392 (409)
T ss_pred HHHHHhhCCCCcCCcCCCeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC--CCHHHHHH
Confidence 66666553 245556665210 012334 446677899999987543 468999755 48999999
Q ss_pred HHHHHHHHHHHHh
Q psy11784 257 IVSTLNRIFTSLQ 269 (284)
Q Consensus 257 ~~~~l~~~l~~~~ 269 (284)
++++|.+++....
T Consensus 393 al~rl~~~~~~~~ 405 (409)
T PLN02656 393 ALGRIKSFYLRHS 405 (409)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887543
No 192
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.39 E-value=4.9e-11 Score=114.56 Aligned_cols=183 Identities=16% Similarity=0.187 Sum_probs=115.5
Q ss_pred HHHHHHHHHhcCCCeeEE-EEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATL-ICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaav-i~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.+. +++.+| ++.| ++-.|.+ .+++.+++|.++|++||+++|+||+|..|-..|....... ...||.
T Consensus 271 ~~~l~~~~~---~~~k~i~i~nP-~NPTG~v-~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~--~~~~~~ 343 (517)
T PRK13355 271 IDDIRSKIT---SRTKAIVIINP-NNPTGAL-YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIA--SLAPDL 343 (517)
T ss_pred HHHHHHhcC---cCceEEEEECC-CCCCCcC-cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHH--HhCCCC
Confidence 566666554 345444 5666 5556764 5799999999999999999999999987633332111111 123443
Q ss_pred -----EEeccccc-CCcceeEEEec--HH----HHHhchh-------------------hh-------------hHHHHH
Q psy11784 156 -----ITVGKPMG-NGMPIGAVITS--RK----IAESLNC-------------------LD-------------DNRPSG 191 (284)
Q Consensus 156 -----v~~sK~l~-~G~p~gav~~~--~~----i~~~~~~-------------------l~-------------~~~~~~ 191 (284)
-+|||.++ .|+++|+++++ ++ +++.+.. ++ +..++.
T Consensus 344 ~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r 423 (517)
T PRK13355 344 FCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQR 423 (517)
T ss_pred eEEEEecchhhccCcccceEEEEeeCchhhHHHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHH
Confidence 24799986 58999999954 43 2222211 11 123345
Q ss_pred HHHHHHHHhc---------cCceeEEEEecc---cHHHHHHH-HHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHH
Q psy11784 192 KYLVRPLGIN---------LHIFWCLILLSI---TYYLYRYT-RRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENV 254 (284)
Q Consensus 192 ~~l~~~L~~~---------~G~~~~i~~~~~---~~~~~~~~-~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~i 254 (284)
+++.+.|+++ .|+++++.+... ......++ +.|.++||++.|+..+ .+++|++. ..+++++
T Consensus 424 ~~l~~~L~~~~g~~~~~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~--~~~~~~l 501 (517)
T PRK13355 424 ELVYNALNAIPGISAVKPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY--LPRLEDL 501 (517)
T ss_pred HHHHHHHhcCCCcccCCCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe--CCCHHHH
Confidence 5666666653 333445455211 01233444 4566889999987544 46899974 5789999
Q ss_pred HHHHHHHHHHHHHH
Q psy11784 255 LFIVSTLNRIFTSL 268 (284)
Q Consensus 255 d~~~~~l~~~l~~~ 268 (284)
++++++|.++++..
T Consensus 502 ~~a~~rl~~~~~~~ 515 (517)
T PRK13355 502 EDAMDRLADFFSYY 515 (517)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998754
No 193
>PRK09265 aminotransferase AlaT; Validated
Probab=99.39 E-value=1e-10 Score=108.84 Aligned_cols=184 Identities=13% Similarity=0.112 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
.+++++.+. +++.+|++...++..|. ..+.+-+++|.++|++||+++|+||+|..|-..+........ ..++
T Consensus 158 ~~~l~~~~~---~~~~~v~l~~P~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~~ 231 (404)
T PRK09265 158 LDDIRSKIT---PRTKAIVIINPNNPTGA-VYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIAS--LAPDLL 231 (404)
T ss_pred HHHHHHhcc---ccceEEEEECCCCCCCc-CCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHH--cCCCce
Confidence 456666554 34555554433555665 457899999999999999999999999876333321111111 1232
Q ss_pred E---EEeccccc-CCcceeEEEec--HH----HHHhchh-------------------hh-------------hHHHHHH
Q psy11784 155 I---ITVGKPMG-NGMPIGAVITS--RK----IAESLNC-------------------LD-------------DNRPSGK 192 (284)
Q Consensus 155 i---v~~sK~l~-~G~p~gav~~~--~~----i~~~~~~-------------------l~-------------~~~~~~~ 192 (284)
+ -+|||.++ .|+++|+++++ ++ +.+.+.. ++ ++.++.+
T Consensus 232 vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~ 311 (404)
T PRK09265 232 CVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRD 311 (404)
T ss_pred EEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHH
Confidence 2 25799995 68999999963 32 3222210 11 2333444
Q ss_pred HHHHHHHhc---------cCceeEEEEecc----cHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHH
Q psy11784 193 YLVRPLGIN---------LHIFWCLILLSI----TYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 193 ~l~~~L~~~---------~G~~~~i~~~~~----~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id 255 (284)
++.+.|+++ .|+++++.+.+. ......+.+.|.++||++.|+..+ .+++|++. ..++++++
T Consensus 312 ~~~~~L~~~~~~~~~~p~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~--~~~~e~l~ 389 (404)
T PRK09265 312 RAWELLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT--LPRVDDLE 389 (404)
T ss_pred HHHHHHhcCCCCcccCCCcceEEEEEecccccCCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe--CCCHHHHH
Confidence 555556543 456667666311 123445667788999999987543 46899975 46899999
Q ss_pred HHHHHHHHHHHHH
Q psy11784 256 FIVSTLNRIFTSL 268 (284)
Q Consensus 256 ~~~~~l~~~l~~~ 268 (284)
+++++|.++++..
T Consensus 390 ~~l~rl~~~l~~~ 402 (404)
T PRK09265 390 EAIGRIGRFLSGY 402 (404)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988653
No 194
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.39 E-value=3.8e-11 Score=109.94 Aligned_cols=167 Identities=16% Similarity=0.162 Sum_probs=115.1
Q ss_pred CeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-C
Q psy11784 90 NIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-N 164 (284)
Q Consensus 90 ~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~ 164 (284)
++.+ ++..| ++-.|. ..+.+.+++|.++|++||+++|+||+|..|-..+...-........+.+ -+|||.++ .
T Consensus 141 ~~~~v~~~~P-~NPtG~-~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~ 218 (354)
T PRK06358 141 EIDLVFLCNP-NNPTGQ-LISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIP 218 (354)
T ss_pred CCCEEEEeCC-CCCCCC-ccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCc
Confidence 3444 45667 555665 5689999999999999999999999998774333201111112222333 37899999 8
Q ss_pred CcceeEEEec-HHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------cCceeE
Q psy11784 165 GMPIGAVITS-RKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--------LHIFWC 207 (284)
Q Consensus 165 G~p~gav~~~-~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~ 207 (284)
|+++|+++++ +.+.+.+.. .+.++++.+++.+.|++. .|.+++
T Consensus 219 G~RiG~lv~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~ 298 (354)
T PRK06358 219 GLRLGYGLTSNKNLAEKLLQMREPWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVYKPSVNFIF 298 (354)
T ss_pred chhheeeecCCHHHHHHHHHhCCCCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEcCCcceEEE
Confidence 9999999984 666665543 123455566666667553 344555
Q ss_pred EEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 208 LILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 208 i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+.+. . ..++++.|.++||.+.++..+ .+++|++ .-++++.+++++.|++++
T Consensus 299 ~~~~-~---~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls---~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 299 FKLE-K---PIDLRKELLKKGILIRSCSNYRGLDENYYRVA---VKSREDNKKLLKALEVIL 353 (354)
T ss_pred EEcC-c---hHHHHHHHHHCCeEEEECCCCCCCCCCEEEEE---eCCHHHHHHHHHHHHHHh
Confidence 5552 2 368899999999999987543 3579996 558899999999998765
No 195
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.39 E-value=7e-11 Score=108.95 Aligned_cols=178 Identities=17% Similarity=0.138 Sum_probs=119.6
Q ss_pred HHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc-
Q psy11784 77 AQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD- 154 (284)
++++++.++.. ..++.+|++-+-++-.|... +++.++++.++| +++++|.||+|..|... . .. ....-.+.
T Consensus 154 ~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~-s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~-~-~~--~~~~~~~~~ 226 (374)
T PRK02610 154 LAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPL-TAAELEWLRSLP--EDILVVIDEAYFEFSQT-T-LV--GELAQHPNW 226 (374)
T ss_pred HHHHHHHHHhhcCCCceEEEEeCCCCCCCCCC-CHHHHHHHHhcc--CCcEEEEeccccccCcc-c-hH--HHHhcCCCE
Confidence 56777777531 13577776655477677654 777788898887 49999999999877321 1 11 11111233
Q ss_pred --EEEeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 155 --IITVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 155 --iv~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+-+|||.++ .|+++|++++++++++.+.. +.+..+..+.+.+.|+++
T Consensus 227 ivi~SfSK~~g~~GlRiG~~v~~~~l~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 306 (374)
T PRK02610 227 VILRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPYNLPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQ 306 (374)
T ss_pred EEEEecchhccCcccceeeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 337899996 69999999999998877654 112223344455555543
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|.++++.+ +.......+++.|.++||++.+. .+.+|++. . +++++++++++|.++++.+
T Consensus 307 ~~~~p~~g~f~~~~l-~~~~~~~~~~~~l~~~gi~v~~~---~~~lRls~--~-~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 307 LRVWPSAANFLYLRL-SQDAALAALHQALKAQGTLVRHT---GGGLRITI--G-TPEENQRTLERLQAALTQL 372 (374)
T ss_pred cEeCCCcceEEEEeC-CCCCCHHHHHHHHHHCCEEEEeC---CCeEEEeC--C-CHHHHHHHHHHHHHHHhhc
Confidence 455666666 33235678889999999999753 47899963 3 4678999999999887654
No 196
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.39 E-value=9.5e-11 Score=108.91 Aligned_cols=176 Identities=15% Similarity=0.101 Sum_probs=120.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++..+.+..|...+ +++|.++|++||+++|+|++|. +|.. .... ....+|++
T Consensus 149 ~~~l~~~i~---~~~~lv~~~~~~~~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~g~~---~~~~--~~~~~d~~ 215 (403)
T TIGR01979 149 LDDLEKLLT---EKTKLVAITHVSNVLGTVNP----VEEIAKLAHQVGAKVLVDGAQA-VPHM---PVDV--QALDCDFY 215 (403)
T ss_pred HHHHHHHhc---cCCeEEEEEcccccccccCC----HHHHHHHHHHcCCEEEEEchhh-cCcc---ccCc--cccCCCEE
Confidence 466666664 45778888888888898887 9999999999999999999996 3221 1111 22357887
Q ss_pred Ee--cccccCCcceeEEEecHHHHHhch------------------------------h---------------------
Q psy11784 157 TV--GKPMGNGMPIGAVITSRKIAESLN------------------------------C--------------------- 183 (284)
Q Consensus 157 ~~--sK~l~~G~p~gav~~~~~i~~~~~------------------------------~--------------------- 183 (284)
++ .|.+| ...+|++++++++.+.+. .
T Consensus 216 ~~s~~K~~g-p~G~g~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~ 294 (403)
T TIGR01979 216 VFSGHKMYG-PTGIGVLYGKEELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLE 294 (403)
T ss_pred EEecccccC-CCCceEEEEchHHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHH
Confidence 54 59764 224788888888765431 0
Q ss_pred --hhhHHHHHHHHHHHHHhcc-------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------CC
Q psy11784 184 --LDDNRPSGKYLVRPLGINL-------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE----------YG 238 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~-------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~----------~~ 238 (284)
.++..++.+++.+.|+++. +.++.+.+. . ....++.+.|.++||.+.++.. ..
T Consensus 295 ~~~~~~~~l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~-~-~~~~~~~~~L~~~gI~v~~g~~~~~~~~~~~~~~ 372 (403)
T TIGR01979 295 NIEAHEHELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVE-G-VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGVP 372 (403)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeC-C-cCHHHHHHHHhhCCEEEcchhhhhHHHHHHhCCC
Confidence 1244455566666665531 234444442 1 2355788888999999975320 14
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+.+|++++...|++|++++++.|+++++.+
T Consensus 373 ~~iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 373 ATCRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999877654
No 197
>PLN02231 alanine transaminase
Probab=99.39 E-value=1e-10 Score=112.36 Aligned_cols=192 Identities=16% Similarity=0.141 Sum_probs=122.6
Q ss_pred HHHHHHHHHhc---CCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc-cCcccccccc--
Q psy11784 77 AQAARNIMEAH---RDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS-GSHFWAFQTQ-- 149 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G~~~~a~~~~-- 149 (284)
+++|++.++.. ...+.+ +++.| ++-.|. +.+++.+++|.++|++||++||.||+|..+-.. +..+..+...
T Consensus 255 ~~~Le~~l~~~~~~~~~~k~ivl~nP-~NPTG~-vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~ 332 (534)
T PLN02231 255 ISELKKQLEDARSKGITVRALVVINP-GNPTGQ-VLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVAR 332 (534)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEeCC-CCCCCc-CCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHh
Confidence 67777777632 114555 45555 445665 669999999999999999999999999876332 2212121111
Q ss_pred --CC---CCcEE---Eeccccc--CCcceeEEEe---cHHHHHhchh-------------------h-------------
Q psy11784 150 --GA---VPDII---TVGKPMG--NGMPIGAVIT---SRKIAESLNC-------------------L------------- 184 (284)
Q Consensus 150 --g~---~pDiv---~~sK~l~--~G~p~gav~~---~~~i~~~~~~-------------------l------------- 184 (284)
|. ...++ ++||++. .|+++|++++ ++++++.+.. +
T Consensus 333 ~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~ 412 (534)
T PLN02231 333 SMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESY 412 (534)
T ss_pred hhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHH
Confidence 11 11244 6799985 4999999986 5777776543 1
Q ss_pred --------hhHHHHHHHHHHHHHhc---------cCceeEEEEe-cccH----------HHHHHHHHHH-HCCcEEeecC
Q psy11784 185 --------DDNRPSGKYLVRPLGIN---------LHIFWCLILL-SITY----------YLYRYTRRMK-EAKIIVANEG 235 (284)
Q Consensus 185 --------~~~~~~~~~l~~~L~~~---------~G~~~~i~~~-~~~~----------~~~~~~~~l~-~~Gv~~~~~~ 235 (284)
+.++++.+.+.+.|+++ .|++.+..+. +... ....++..|+ +.||.+.|+.
T Consensus 413 ~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs 492 (534)
T PLN02231 413 MAEKDGILSSLARRAKTLEDALNSLEGVTCNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS 492 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCceecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence 12344455566666554 3344442332 2110 1223566666 5699999986
Q ss_pred CCC-----CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhcc
Q psy11784 236 EYG-----NVLLFLPAMCLTTENVLFIVSTLNRIFTSLQMDS 272 (284)
Q Consensus 236 ~~~-----~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~~ 272 (284)
.++ .++|++ +..+++++++++++|.+++++..++.
T Consensus 493 ~Fg~~~g~~~~Rit--~~~~~e~l~eal~RL~~~~~~~~~~~ 532 (534)
T PLN02231 493 GFGQVPGTWHFRCT--ILPQEDKIPAIVSRLTEFHKSFMDEF 532 (534)
T ss_pred ccCCCCCCCeEEEE--eCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 543 368886 56789999999999999998876543
No 198
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.38 E-value=2.1e-11 Score=111.94 Aligned_cols=168 Identities=17% Similarity=0.115 Sum_probs=115.3
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc--cCCC-CcE---EEecccc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT--QGAV-PDI---ITVGKPM 162 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~--~g~~-pDi---v~~sK~l 162 (284)
.++.+|++...++..|.+ .+.+.+++|.++|++||+++|.||+|..|...+........ .+.. +.+ -+|||.+
T Consensus 147 ~~~~~v~~~~p~NPtG~~-~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 225 (364)
T PRK07865 147 QRPALIWLNSPSNPTGRV-LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQS 225 (364)
T ss_pred ccceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhcc
Confidence 357788887667767764 47889999999999999999999999877443431111111 0111 122 3689999
Q ss_pred c-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc--------cC
Q psy11784 163 G-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--------LH 203 (284)
Q Consensus 163 ~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--------~G 203 (284)
+ .|+++|++++++++++.+.. .+.++++.+.+.+.|++. .|
T Consensus 226 ~~~GlRiG~i~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~ 305 (364)
T PRK07865 226 NLAGYRAGFVAGDPALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAAGFRVDHSEAG 305 (364)
T ss_pred CCCceeeEEEecCHHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHcCCcccCCCcc
Confidence 6 68999999999998776543 113445556666666653 34
Q ss_pred ceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 204 IFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 204 ~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+++++.+. .....+++.|.++||++.|+..+ .+++|+... .+++++++++++|.
T Consensus 306 ~~~~~~~~---~~~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~~--~~~~~~~~~~~~l~ 363 (364)
T PRK07865 306 LYLWATRG---EDCWDTVAWLAERGILVAPGDFYGPAGAQHVRVALT--ATDERIAAAVERLA 363 (364)
T ss_pred EEEEEeCC---CCHHHHHHHHHHCCEEEeCccccCcCCCCEEEEEec--CCHHHHHHHHHHhh
Confidence 45555542 23456788899999999886432 468999754 47899999998874
No 199
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.38 E-value=8.3e-11 Score=108.72 Aligned_cols=173 Identities=12% Similarity=0.035 Sum_probs=115.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI- 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi- 155 (284)
++.+++.+. ..++.+|++....+..|...+ .+++.++++.. +++|+||+|..|...+. ... ...-.+.+
T Consensus 164 ~~~l~~~~~--~~~~~~v~l~~P~NPTG~~~~----~~~l~~l~~~~-~~vi~DeaY~~~~~~~~-~~~--~~~~~~~vi 233 (380)
T PLN03026 164 VPRIVEAVE--THKPKLLFLTSPNNPDGSIIS----DDDLLKILELP-ILVVLDEAYIEFSTQES-RMK--WVKKYDNLI 233 (380)
T ss_pred HHHHHHHHh--ccCCcEEEEeCCCCCCCCCCC----HHHHHHHHhcC-CEEEEECcchhhcCCcc-hHH--HHHhCCCEE
Confidence 566766663 234667777766777887765 55556666544 99999999987743232 111 11112333
Q ss_pred --EEeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 156 --ITVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
-+|||.++ .|+++|++++++++++.+.. .+.+++..+++.+.|+++
T Consensus 234 v~~SfSK~~glaGlRiGy~~~~~~~i~~l~~~~~~~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 313 (380)
T PLN03026 234 VLRTFSKRAGLAGLRVGYGAFPLSIIEYLWRAKQPYNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFL 313 (380)
T ss_pred EEecchHhhcCccccceeeecCHHHHHHHHHhcCCCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 37899998 79999999999999887654 124555666777777764
Q ss_pred -----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 202 -----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.|.++.+.+ +......++++.|.++||.++++.. ..+++|++.. ++++.+.+++.|++
T Consensus 314 ~~~p~~~~f~~~~~-~~~~~~~~~~~~l~~~gI~v~~~~~~~~~~~lRis~~---~~~~~~~l~~al~~ 378 (380)
T PLN03026 314 EPYPSDANFILCRV-TSGRDAKKLKEDLAKMGVMVRHYNSKELKGYIRVSVG---KPEHTDALMEALKQ 378 (380)
T ss_pred eECCCCCeEEEEEC-CCCCCHHHHHHHHHHCCeEEEECCCCCCCCEEEEecC---CHHHHHHHHHHHHH
Confidence 344555554 2223467899999999999987642 2468999643 77888988888865
No 200
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.37 E-value=2.3e-11 Score=111.37 Aligned_cols=166 Identities=17% Similarity=0.126 Sum_probs=115.0
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cc--cCC--CCcEE--Eeccc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QT--QGA--VPDII--TVGKP 161 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~--~g~--~pDiv--~~sK~ 161 (284)
+++.+|++...++..|. ..+.+.+++|.++|++||+++|.||+|..|...+. .... .. .+. ..-++ +|||.
T Consensus 141 ~~~~~v~~~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~~~vi~~~S~SK~ 218 (357)
T TIGR03539 141 VGPDLIWLNSPGNPTGR-VLSVDELRAIVAWARERGAVVASDECYLELGWEGR-PVSILDPRVCGGDHTGLLAVHSLSKR 218 (357)
T ss_pred cCccEEEEeCCCCCcCc-cCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCC-CccceecccCCCccccEEEEeccccc
Confidence 35778888776666675 55889999999999999999999999987754343 1111 10 011 11233 78999
Q ss_pred cc-CCcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc--------c
Q psy11784 162 MG-NGMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--------L 202 (284)
Q Consensus 162 l~-~G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--------~ 202 (284)
++ .|+++|++++++++++.+.. .+.++++.+++.+.|++. .
T Consensus 219 ~~~~G~R~G~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~~~~p~~ 298 (357)
T TIGR03539 219 SNLAGYRAGFVAGDPALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKAGFRIDHSEA 298 (357)
T ss_pred cCCCceeEEEEecCHHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCCCc
Confidence 85 68999999999988776643 113445566666666653 3
Q ss_pred CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 203 HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 203 G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
|+++++.+ + .....+.+.|.++||.+.|+..+ .+.+|++.. .+++++++++++|
T Consensus 299 ~~~~~~~~-~--~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~iRis~~--~~~~~i~~~~~~l 356 (357)
T TIGR03539 299 GLYLWATR-G--EDAWDTVDRLAELGILVAPGDFYGPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred cEEEEEEC-C--CCHHHHHHHHHhCCEEECCccccCCCCCCeEEEEec--CCHHHHHHHHHhh
Confidence 34445544 2 24567888899999999986532 478999764 4789999999876
No 201
>PLN02187 rooty/superroot1
Probab=99.37 E-value=1.7e-10 Score=109.36 Aligned_cols=189 Identities=14% Similarity=0.095 Sum_probs=118.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pDi 155 (284)
++++++.++ ....+.++.-| .+-.|. +.+.+.+++|.++|++||+++|.||+|..|-..|..+.....+ +..+-+
T Consensus 194 ~~~l~~~~~--~~~~~v~i~nP-~NPTG~-v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi 269 (462)
T PLN02187 194 LEGIEAIAD--ENTVAMVVINP-NNPCGN-VYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVL 269 (462)
T ss_pred HHHHHHhcC--CCcEEEEEeCC-CCCCCC-ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEE
Confidence 566766654 22255667777 344564 5689999999999999999999999999763333211121111 121222
Q ss_pred --EEeccccc-CCcceeEEEec-H-HH---HHhchh----------------------h------------hhHHHHHHH
Q psy11784 156 --ITVGKPMG-NGMPIGAVITS-R-KI---AESLNC----------------------L------------DDNRPSGKY 193 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~~-~-~i---~~~~~~----------------------l------------~~~~~~~~~ 193 (284)
-+|||.++ .|+++|++++. + .+ ++.+.. + +.++++.++
T Consensus 270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~ 349 (462)
T PLN02187 270 TLAGISKGWVVPGWKIGWIALNDPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDL 349 (462)
T ss_pred EEecchhhcCCccceeEEEEecCchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH
Confidence 26899965 68999999983 2 22 111111 1 134445555
Q ss_pred HHHHHHhc----------cCceeEEEEec---cc-HHHHHHHH-HHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHH
Q psy11784 194 LVRPLGIN----------LHIFWCLILLS---IT-YYLYRYTR-RMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 194 l~~~L~~~----------~G~~~~i~~~~---~~-~~~~~~~~-~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~ 256 (284)
+.+.|+++ .|.++++.+.. .. ....+++. .+.++||++.|+..+ .+++|++. ...++.+++
T Consensus 350 l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~--~~~~e~l~~ 427 (462)
T PLN02187 350 VCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITI--GVEAHMLED 427 (462)
T ss_pred HHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEe--CCCHHHHHH
Confidence 66666653 13444554421 11 12335554 457889999987544 47899964 557999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy11784 257 IVSTLNRIFTSLQMD 271 (284)
Q Consensus 257 ~~~~l~~~l~~~~~~ 271 (284)
++++|.+++++..++
T Consensus 428 al~rL~~~l~~~~~~ 442 (462)
T PLN02187 428 ALERLKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHHHHHhhhc
Confidence 999999999876543
No 202
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.37 E-value=2e-10 Score=109.42 Aligned_cols=191 Identities=14% Similarity=0.135 Sum_probs=121.6
Q ss_pred HHHHHHHHHhc---CCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc-Cccccccc--c
Q psy11784 77 AQAARNIMEAH---RDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG-SHFWAFQT--Q 149 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G-~~~~a~~~--~ 149 (284)
.++|++.+... ..++.+ +++.| ++-.|. ..+.+.+++|.++|++||+++|.||+|..+-..+ ..+-+... .
T Consensus 202 ~~~l~~~l~~~~~~~~~~k~l~l~~P-~NPTG~-~~s~e~~~~i~~~a~~~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~ 279 (481)
T PTZ00377 202 QEELEEAYEQAVRNGITPRALVVINP-GNPTGQ-VLTRDVMEEIIKFCYEKGIVLMADEVYQENIYDGEKPFISFRKVLL 279 (481)
T ss_pred HHHHHHHHHHHHhcCCCeeEEEEECC-CCCCCc-CCCHHHHHHHHHHHHHCCCEEEEehhhHhhccCCCCCcccHHHHHH
Confidence 57777777521 124654 45555 555665 5689999999999999999999999998753322 11111110 1
Q ss_pred CCCC------cEE---Eecccc-c-CCcceeEEEe---cHHHHHhchh-------------------hh-----------
Q psy11784 150 GAVP------DII---TVGKPM-G-NGMPIGAVIT---SRKIAESLNC-------------------LD----------- 185 (284)
Q Consensus 150 g~~p------Div---~~sK~l-~-~G~p~gav~~---~~~i~~~~~~-------------------l~----------- 185 (284)
+..+ .++ +|||++ + .|+++|++++ ++++++.+.. ++
T Consensus 280 ~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~ 359 (481)
T PTZ00377 280 ELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPL 359 (481)
T ss_pred hhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHH
Confidence 1222 233 589996 4 5999999986 7888776544 10
Q ss_pred ----------hHHHHHHHHHHHHHhc---------cCceeEEEEe-cccH----------HHHHHH-HHHHHCCcEEeec
Q psy11784 186 ----------DNRPSGKYLVRPLGIN---------LHIFWCLILL-SITY----------YLYRYT-RRMKEAKIIVANE 234 (284)
Q Consensus 186 ----------~~~~~~~~l~~~L~~~---------~G~~~~i~~~-~~~~----------~~~~~~-~~l~~~Gv~~~~~ 234 (284)
+++++.+.+.+.|+++ .|+++++.+. +... ....++ ..|.++||.+.|+
T Consensus 360 ~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~~~~p~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG 439 (481)
T PTZ00377 360 YKRERDAIFTSLKRRAELLTDELNKIEGVSCQPVEGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPG 439 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcEeecCCeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCC
Confidence 1234445566666653 2455554442 1110 122344 4455789999987
Q ss_pred CCCC-----CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 235 GEYG-----NVLLFLPAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 235 ~~~~-----~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
..++ +++|++.. .+++++++++++|.+++++..++
T Consensus 440 ~~F~~~~~~~~~Rls~~--~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 440 SGFGQKPGTYHFRITIL--PPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred cccCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 6543 48999754 67899999999999999876544
No 203
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.37 E-value=1.5e-10 Score=106.37 Aligned_cols=176 Identities=13% Similarity=0.093 Sum_probs=112.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc-ccCccc---cccccCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR-SGSHFW---AFQTQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-~G~~~~---a~~~~g~~ 152 (284)
++++++.++. ...+.+++.| .+..|.+.+ +++|.++|++||+++|+|++|.++-. ...... ..+..-..
T Consensus 143 ~~~l~~~l~~--~~~~vv~~~~-~~~tG~~~~----~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~ 215 (373)
T TIGR03812 143 VKDVEDLIDD--NTIGIVGIAG-TTELGQIDD----IEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPG 215 (373)
T ss_pred HHHHHHHHhh--CcEEEEEECC-CCCCCccCC----HHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCC
Confidence 6777777752 2245666776 456788776 99999999999999999999975410 000000 01111013
Q ss_pred CcEEEec--ccccCCcceeEEE-ecHHHHHhch-------------------h---------------------hhhHHH
Q psy11784 153 PDIITVG--KPMGNGMPIGAVI-TSRKIAESLN-------------------C---------------------LDDNRP 189 (284)
Q Consensus 153 pDiv~~s--K~l~~G~p~gav~-~~~~i~~~~~-------------------~---------------------l~~~~~ 189 (284)
.|.++++ |...++.|.|+++ .++++.+.+. . .++..+
T Consensus 216 ~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 216 VQSITIDPHKMGLSPIPAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred CCEEEECccccCCCcCCceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 4665543 7444456777666 4666554321 0 235666
Q ss_pred HHHHHHHHHHhccCce-------eEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 190 SGKYLVRPLGINLHIF-------WCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 190 ~~~~l~~~L~~~~G~~-------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+.+++++.|+++ |.. ..+.+.. .....+.+.|.++|+++.... .++++|++++..+|++|+|.+++.|+
T Consensus 296 ~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~--~~~~~v~~~L~~~gi~v~~~~-~~~~iRis~~~~~t~edid~l~~~L~ 371 (373)
T TIGR03812 296 NTRYLVEELKKI-GFEPVIEPVLNIVAFEV--DDPEEVRKKLRDRGWYVSVTR-CPKALRIVVMPHVTREHIEEFLEDLK 371 (373)
T ss_pred HHHHHHHHHHhC-CCeEEcCCCceEEEEEe--CCHHHHHHHHHHCCceeccCC-CCCEEEEEEECCCCHHHHHHHHHHHh
Confidence 777888888774 321 1111111 123578899999999998653 35789999999999999999999997
Q ss_pred H
Q psy11784 263 R 263 (284)
Q Consensus 263 ~ 263 (284)
+
T Consensus 372 ~ 372 (373)
T TIGR03812 372 E 372 (373)
T ss_pred h
Confidence 5
No 204
>PRK02948 cysteine desulfurase; Provisional
Probab=99.36 E-value=5.4e-11 Score=109.81 Aligned_cols=178 Identities=10% Similarity=0.024 Sum_probs=120.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++..|+++.+.+..|.+.+ +++|.++|+++|+++++|++|+ ||... ...+.+ ..|++
T Consensus 128 ~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~vivD~~~~-~g~~~---~~~~~~--~~d~~ 194 (381)
T PRK02948 128 LVDLERAIT---PDTVLASIQHANSEIGTIQP----IAEIGALLKKYNVLFHSDCVQT-FGKLP---IDVFEM--GIDSL 194 (381)
T ss_pred HHHHHHhcC---CCCEEEEEECCcCCcEeehh----HHHHHHHHHHcCCEEEEEChhh-ccccc---cCcccC--CCCEE
Confidence 566776664 45678889988989999887 8999999999999999998886 65432 222233 36766
Q ss_pred --EecccccCCcceeEEEecHHH-HHhc----------hh-------------------------hhhHHHHHHHHHHHH
Q psy11784 157 --TVGKPMGNGMPIGAVITSRKI-AESL----------NC-------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 157 --~~sK~l~~G~p~gav~~~~~i-~~~~----------~~-------------------------l~~~~~~~~~l~~~L 198 (284)
+++|.+|. ..+|++++++++ ...+ .. .+++++..+++.+.|
T Consensus 195 ~~s~~K~~gp-~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L 273 (381)
T PRK02948 195 SVSAHKIYGP-KGVGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQI 273 (381)
T ss_pred EecHHhcCCC-CcEEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56797652 226787777654 1111 00 235666777777877
Q ss_pred HhccCceeEE------------EEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEEEc
Q psy11784 199 GINLHIFWCL------------ILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLFLP 245 (284)
Q Consensus 199 ~~~~G~~~~i------------~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~~p 245 (284)
+++ |+-+.. .+........++...|.++||.++.+.. ..+.+|+++
T Consensus 274 ~~~-~~~v~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~ 352 (381)
T PRK02948 274 QTL-PLPIEVEGHSTSCLPHIIGVTIKGIEGQYTMLECNRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSF 352 (381)
T ss_pred hcC-CCCEEEeCCCccCcCCEEEEEeCCCCHHHHHHhcccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEc
Confidence 764 321110 0001111346677788889999986431 136899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 246 AMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
...+|++|+|.+++.|.++++.+.
T Consensus 353 ~~~~t~~di~~l~~~l~~~~~~~~ 376 (381)
T PRK02948 353 GQQTTKDQIDTTIHALETIGNQFY 376 (381)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999887653
No 205
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.36 E-value=3.4e-10 Score=103.96 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=119.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+... .++..|.+-...+..|...+ +++|.++|+++|+++|+|.+| .||.. ..... ...+|++
T Consensus 119 ~~~l~~~l~~~-~~~~~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~~livDa~~-~~g~~---~~~~~--~~~~d~~ 187 (368)
T PRK13479 119 AAEVEAALAAD-PRITHVALVHCETTTGILNP----LDEIAAVAKRHGKRLIVDAMS-SFGAI---PIDIA--ELGIDAL 187 (368)
T ss_pred HHHHHHHHHhC-CCCcEEEEEcccCccccccC----HHHHHHHHHHcCCEEEEEccc-ccCCc---ccccc--ccCceEE
Confidence 57777777632 34445555555556777777 899999999999999999777 46432 12222 2346776
Q ss_pred E--ecccccCCcceeEEEecHHHHHhchh--------------------------------------------------h
Q psy11784 157 T--VGKPMGNGMPIGAVITSRKIAESLNC--------------------------------------------------L 184 (284)
Q Consensus 157 ~--~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------------------------l 184 (284)
+ ++|++.|...+|++++++++.+.+.. .
T Consensus 188 v~s~~K~l~g~~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~ 267 (368)
T PRK13479 188 ISSANKCIEGVPGFGFVIARRSELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARG 267 (368)
T ss_pred EecCccccccCCCceEEEECHHHHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHH
Confidence 4 56988764457999999887543210 2
Q ss_pred hhHHHHHHHHHHHHHhccCcee----------EEEEe-ccc--HHHHHHHHHHHHCCcEEeecCCC-CCEEEEEcCCCCC
Q psy11784 185 DDNRPSGKYLVRPLGINLHIFW----------CLILL-SIT--YYLYRYTRRMKEAKIIVANEGEY-GNVLLFLPAMCLT 250 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~~G~~~----------~i~~~-~~~--~~~~~~~~~l~~~Gv~~~~~~~~-~~~lr~~p~l~~t 250 (284)
+++.++.+++++.|+++ |+-. .+.+. +.. ....++.+.|.++||.+.++... .+.+|+...-..|
T Consensus 268 ~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~~~~~iRis~~~~~t 346 (368)
T PRK13479 268 ARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLTQVDTFRIGCIGDVD 346 (368)
T ss_pred HHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCCCCCEEEEecCCCCC
Confidence 24555666777777664 4321 12222 211 24568999999999999875332 3589997655679
Q ss_pred HHHHHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~ 268 (284)
++|++.+++.|+++++++
T Consensus 347 ~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 347 AADIRRLVAAIAEALYWM 364 (368)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999988754
No 206
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.36 E-value=4.6e-11 Score=111.59 Aligned_cols=176 Identities=14% Similarity=0.076 Sum_probs=115.0
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc---EEEecccccCC
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD---IITVGKPMGNG 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD---iv~~sK~l~~G 165 (284)
..+.++++-.-++-.|.+ .+.+-+++|.++|++||+++|.||+|.-+-. ...+..... ...+. +.+|||....|
T Consensus 178 ~~~~~i~l~~P~NPTG~~-~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~-~~~~~vI~~~SfSK~~~pG 254 (416)
T PRK09440 178 EDTGAICVSRPTNPTGNV-LTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATP-LWNPNIILCMSLSKLGLPG 254 (416)
T ss_pred CCceEEEEecCCCCCCcc-CCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCc-cccCCeEEEecccccCCCc
Confidence 345555554446667764 5899999999999999999999999963211 100001000 01223 34789975568
Q ss_pred cceeEEEecHHHHHhchh--------------------hh------h--------HHHHHHHHHHHHHhc----------
Q psy11784 166 MPIGAVITSRKIAESLNC--------------------LD------D--------NRPSGKYLVRPLGIN---------- 201 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~~--------------------l~------~--------~~~~~~~l~~~L~~~---------- 201 (284)
+++|++++++++++.+.. ++ + ++++.+.+++.|.+.
T Consensus 255 lRiG~~i~~~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~~~~ 334 (416)
T PRK09440 255 VRCGIVIADEEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCLIHK 334 (416)
T ss_pred ceEEEEeCCHHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeEEec
Confidence 999999999998877654 10 1 122233444444321
Q ss_pred --cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC-----------CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 --LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY-----------GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 --~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~-----------~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|+++++++........++++.|.++||.+.|+..+ .+++|++.+ .+++++++++++|.+++++.
T Consensus 335 p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~--~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 335 PEGAIFLWLWFKDLPITTEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYV--QDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred CCCceEEEEECCCCCCCHHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEec--CCHHHHHHHHHHHHHHHHHH
Confidence 356666666321234567888899999999987432 147999754 47999999999999998775
Q ss_pred h
Q psy11784 269 Q 269 (284)
Q Consensus 269 ~ 269 (284)
.
T Consensus 413 ~ 413 (416)
T PRK09440 413 Y 413 (416)
T ss_pred h
Confidence 4
No 207
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.36 E-value=1.6e-10 Score=108.20 Aligned_cols=177 Identities=14% Similarity=0.151 Sum_probs=122.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++..|++.-+.+..|.+.+ +++|.++|+++|+++|+|++|. +|.. .. ......+|++
T Consensus 163 ~~~l~~~i~---~~t~lv~i~~~~n~tG~~~~----~~~I~~l~~~~g~~vivD~a~~-~g~~---~~--~~~~~~~d~~ 229 (424)
T PLN02855 163 VEQLKELLS---EKTKLVATHHVSNVLGSILP----VEDIVHWAHAVGAKVLVDACQS-VPHM---PV--DVQTLGADFL 229 (424)
T ss_pred HHHHHHHhc---cCceEEEEeCccccccccCC----HHHHHHHHHHcCCEEEEEhhhh-cCCc---CC--CchhcCCCEE
Confidence 566777665 35778888888888898887 8999999999999999999995 4321 11 2223347877
Q ss_pred E--ecccccCCcceeEEEecHHHHHhchh---------------------------------------------------
Q psy11784 157 T--VGKPMGNGMPIGAVITSRKIAESLNC--------------------------------------------------- 183 (284)
Q Consensus 157 ~--~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------------------------- 183 (284)
+ +.| +.|.-.+|++++++++.+.+..
T Consensus 230 ~~s~~K-~~gp~G~G~l~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~ 308 (424)
T PLN02855 230 VASSHK-MCGPTGIGFLWGKSDLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMD 308 (424)
T ss_pred Eeeccc-ccCCCccEEEEEchhhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHH
Confidence 4 569 4332347899888877554310
Q ss_pred --hhhHHHHHHHHHHHHHhccC---------------ceeEEEEecccHHHHHHHHHHHHC-CcEEeecCC---------
Q psy11784 184 --LDDNRPSGKYLVRPLGINLH---------------IFWCLILLSITYYLYRYTRRMKEA-KIIVANEGE--------- 236 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G---------------~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~--------- 236 (284)
.++..+..+++++.|+++.| .++.+.+ + ......+.+.|.++ ||.++.+..
T Consensus 309 ~i~~~~~~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~-~-~~~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~ 386 (424)
T PLN02855 309 RIHEYEVELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNV-E-GIHPTDLSTFLDQQHGVAIRSGHHCAQPLHRYL 386 (424)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEE-C-CcCHHHHHHHhcccCCEEEechhhhhHHHHHHh
Confidence 12455566677777765411 1333333 1 12356788888877 999885321
Q ss_pred -CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 237 -YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 237 -~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
..+.+|++++...|++|++.+++.|+++++.+.
T Consensus 387 g~~~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 387 GVNASARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred CCCCeEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 135799999999999999999999999987753
No 208
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.36 E-value=1.8e-10 Score=105.21 Aligned_cols=172 Identities=16% Similarity=0.194 Sum_probs=115.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+.. .++.+|++...++..|...+ .+++.++|++++.++|+||+|..|. +..... ...-.+.++
T Consensus 137 ~~~l~~~~~~--~~~k~v~l~~p~NPtG~~~~----~~~l~~l~~~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi 206 (351)
T PRK14807 137 VGSFIKVIEK--YQPKLVFLCNPNNPTGSVIE----REDIIKIIEKSRGIVVVDEAYFEFY--GNTIVD--VINEFENLI 206 (351)
T ss_pred HHHHHHHhhc--cCCCEEEEeCCCCCCCCCCC----HHHHHHHHHhCCCEEEEeCcchhhc--ccchHH--HhhhCCCEE
Confidence 5667776652 24666766666777787766 6778888888888999999998762 321111 111113333
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+|||.++ .|+++|++++++++++.+.. ++.++++.+++.+.|+++
T Consensus 207 ~~~S~SK~~~~~GlRiG~~v~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~ 286 (351)
T PRK14807 207 VLRTLSKAFGLAGLRVGYAVANENILKYLNLVKSPYNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIK 286 (351)
T ss_pred EEecchHhcccchhceeeeecCHHHHHHHHHccCCCCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcE
Confidence 6899998 89999999999999887654 123445555666666543
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+ + ....+++.|.++||.+.+... ..+.+|++.. ++++.+.+++.|++++
T Consensus 287 ~~~~~~~~~~i~~-~---~~~~~~~~l~~~gV~v~~~~~~~~~~~~iRis~~---~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 287 VYPSKTNFILVKF-K---DADYVYQGLLERGILVRDFSKVEGLEGALRITVS---SCEANDYLINGLKELL 350 (351)
T ss_pred ECcCCccEEEEEc-C---CHHHHHHHHHHCCEEEEECCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHhh
Confidence 344555555 2 256788899999999986532 2468999633 6788888888887653
No 209
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.35 E-value=2.9e-10 Score=105.88 Aligned_cols=185 Identities=12% Similarity=0.120 Sum_probs=117.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. .+..++++....+..|. ..+.+-+++|.++|+++|+++|+||+|..|-..+..+.....+.-.+.++
T Consensus 159 ~~~l~~~~~---~~~~~v~i~~p~NPtG~-~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi 234 (403)
T TIGR01265 159 LDGLEALAD---EKTVAIVVINPSNPCGS-VFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVL 234 (403)
T ss_pred HHHHHHHhC---cCccEEEEecCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEE
Confidence 566666654 34455554433555664 56888899999999999999999999998754442111222121112233
Q ss_pred ---Eeccccc-CCcceeEEEecH--H-----HHHhchh-------------------------------hhhHHHHHHHH
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSR--K-----IAESLNC-------------------------------LDDNRPSGKYL 194 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~--~-----i~~~~~~-------------------------------l~~~~~~~~~l 194 (284)
+|||.++ .|+++|++++.. + +.+.+.. .+.++++.+++
T Consensus 235 ~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 314 (403)
T TIGR01265 235 SLGGISKRWVVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELC 314 (403)
T ss_pred EEeecccccCCCcceEEEEEEeCchhhhHHHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 6899965 689999999842 1 2222111 11334444556
Q ss_pred HHHHHhc---------cCceeEEEEecc----cHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHH
Q psy11784 195 VRPLGIN---------LHIFWCLILLSI----TYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 195 ~~~L~~~---------~G~~~~i~~~~~----~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~ 258 (284)
.+.|+.. .|+++++++... .....++++.++ ++||.+.|+..+ .+.+|++. ...++.+++++
T Consensus 315 ~~~L~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~--~~~~~~l~~~l 392 (403)
T TIGR01265 315 YEELKDIPGLVCPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITI--TVPESMLEEAC 392 (403)
T ss_pred HHHHhcCCCceecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe--cCCHHHHHHHH
Confidence 5666542 455666666311 013567878764 789999987543 47899975 45788999999
Q ss_pred HHHHHHHHH
Q psy11784 259 STLNRIFTS 267 (284)
Q Consensus 259 ~~l~~~l~~ 267 (284)
++|.+++++
T Consensus 393 ~~l~~~~~~ 401 (403)
T TIGR01265 393 SRIKEFCER 401 (403)
T ss_pred HHHHHHHHh
Confidence 999888754
No 210
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.34 E-value=2.5e-10 Score=104.95 Aligned_cols=165 Identities=14% Similarity=0.103 Sum_probs=114.5
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-C
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-N 164 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~ 164 (284)
+++.+|++...++..|.+. +.+-++++.+.|+ +++++|+||++..|..... . ....+..+.+ -+|||.++ .
T Consensus 151 ~~~~lv~l~~p~NPTG~~~-~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~-~--~~~~~~~~~vi~~~SfSK~~gl~ 225 (364)
T PRK04781 151 SNAKLVFLCSPSNPAGSAI-ALDQIERALQALQ-GKALVVVDEAYGEFSDVPS-A--VGLLARYDNLAVLRTLSKAHALA 225 (364)
T ss_pred cCCeEEEEcCCCCCCCCCc-CHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcc-h--HHHHhhCCCEEEEecChhhcccc
Confidence 3566777665566677755 6777777777775 4899999999987742111 1 1111223443 37899999 8
Q ss_pred CcceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc---------cCce
Q psy11784 165 GMPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN---------LHIF 205 (284)
Q Consensus 165 G~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~---------~G~~ 205 (284)
|+++|++++++++++.+.. ++.++++.+++.+.|+++ .|.+
T Consensus 226 GlRvGy~v~~~~l~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f 305 (364)
T PRK04781 226 AARIGSLIANAELIAVLRRCQAPYPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNF 305 (364)
T ss_pred cceeeeeeCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcE
Confidence 9999999999999887764 123445556667777654 4556
Q ss_pred eEEEEecccHHHHHHHHHHHHCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 206 WCLILLSITYYLYRYTRRMKEAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 206 ~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+++.+ + ...++.+.|.++||++.++.. ..+.+|++. .++++.+.+++.|+++.
T Consensus 306 ~~~~~-~---~~~~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~---~~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 306 LLVRF-D---DAEAAFQALLAAGVVVRDQRAAPRLSDALRITL---GTPEQNDRVLAALQRTQ 361 (364)
T ss_pred EEEEc-C---CHHHHHHHHHHCCeEEeeCCCCCCCCCeEEEeC---CCHHHHHHHHHHHHHHH
Confidence 66665 2 246788899999999998643 246899963 37899999999987754
No 211
>KOG0259|consensus
Probab=99.34 E-value=7e-11 Score=105.15 Aligned_cols=188 Identities=14% Similarity=0.123 Sum_probs=125.8
Q ss_pred HHHHHHHHHHHhcCCC-eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCC
Q psy11784 75 KYAQAARNIMEAHRDN-IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAV 152 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~-vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~ 152 (284)
-.++.+|.+++ ++ +|.||+.|-.-.| .+++.+.|++|.++|+++|+++|.||||.-+-.-++.+.....+ .+.
T Consensus 187 IDL~~veal~D---ENT~AivviNP~NPcG--nVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiV 261 (447)
T KOG0259|consen 187 IDLDGVEALAD---ENTVAIVVINPNNPCG--NVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIV 261 (447)
T ss_pred echHHHHHhhc---cCeeEEEEeCCCCCCc--ccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccC
Confidence 33788888887 34 6777788854433 36799999999999999999999999997442223323333333 345
Q ss_pred CcEEE--eccccc-CCcceeEEEecHH--------HHHhchh-------------------------------hhhHHHH
Q psy11784 153 PDIIT--VGKPMG-NGMPIGAVITSRK--------IAESLNC-------------------------------LDDNRPS 190 (284)
Q Consensus 153 pDiv~--~sK~l~-~G~p~gav~~~~~--------i~~~~~~-------------------------------l~~~~~~ 190 (284)
|-+.+ +||+-= -||++||++..+. +.+.+.. ++-++.+
T Consensus 262 PVitlggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~n 341 (447)
T KOG0259|consen 262 PVITLGGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSN 341 (447)
T ss_pred ceEeecccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhh
Confidence 64432 456554 5899999987531 2222222 2345566
Q ss_pred HHHHHHHHHhc---------cCce-eEEEEe----cccHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEEcCCCCCHHH
Q psy11784 191 GKYLVRPLGIN---------LHIF-WCLILL----SITYYLYRYTRRMK-EAKIIVANEGEY--GNVLLFLPAMCLTTEN 253 (284)
Q Consensus 191 ~~~l~~~L~~~---------~G~~-~~i~~~----~~~~~~~~~~~~l~-~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~ 253 (284)
.+.-.+.|+++ .|.| ..+.+. ++-++...|++.|. |+.+++.|+..+ .|++|+. ++...+.
T Consensus 342 a~l~y~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~--i~~~~~~ 419 (447)
T KOG0259|consen 342 ADLCYSRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIV--ITVEEEM 419 (447)
T ss_pred HHHHHHHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEE--EccChHH
Confidence 66666777776 2332 233332 23334566787776 779999988664 4899995 7788999
Q ss_pred HHHHHHHHHHHHHHHh
Q psy11784 254 VLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 254 id~~~~~l~~~l~~~~ 269 (284)
++++++||+++..+-.
T Consensus 420 leea~~Rik~Fc~RH~ 435 (447)
T KOG0259|consen 420 LEEAFSRIKEFCDRHS 435 (447)
T ss_pred HHHHHHHHHHHHHhhh
Confidence 9999999999997754
No 212
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.34 E-value=1.5e-10 Score=107.82 Aligned_cols=175 Identities=13% Similarity=0.117 Sum_probs=116.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++..+++..|...+ +++|.++|++||+++++|++|+ +|.. ..+..+..+|++
T Consensus 132 ~~~l~~~l~---~~~~lv~v~~~~n~tG~~~~----~~~I~~l~~~~g~~livD~a~a-~g~~-----~~~~~~~~~D~~ 198 (402)
T TIGR02006 132 LEELKAAIR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERKVFFHVDAAQS-VGKI-----PINVNELKVDLM 198 (402)
T ss_pred HHHHHHhcC---CCCEEEEEECCCcCceeccc----HHHHHHHHHHcCCEEEEEcchh-cCCc-----ccCccccCCCEE
Confidence 566776664 45788889999998998887 9999999999999999999996 4322 222234578999
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhch-------------h-------------------------hhhHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLN-------------C-------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~-------------~-------------------------l~~~~~~~~~l~~ 196 (284)
++| |.++ ...+|+++.+++....+. . .++.+++.+++++
T Consensus 199 ~~s~~K~~g-p~G~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~ 277 (402)
T TIGR02006 199 SISGHKIYG-PKGIGALYVRRKPRVRLEALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAKEEMAQDTAHVLALRDRLLN 277 (402)
T ss_pred EEehhhhcC-CCceEEEEEccCCCCCCCceecCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 998 9654 335888888764322111 0 1256667777777
Q ss_pred HHHhccCce------------eEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEE
Q psy11784 197 PLGINLHIF------------WCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLF 243 (284)
Q Consensus 197 ~L~~~~G~~------------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~ 243 (284)
.|+++.+.. +.+.+.. .....+...+ +|+.++.+.. ..+.+|+
T Consensus 278 ~l~~~~~v~~~~~~~~~~p~~~~v~f~~--~~~~~~~~~l--~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~ 353 (402)
T TIGR02006 278 GIKSIEEVYLNGDLEHRVPGNLNVSFNY--VEGESLIMAL--KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRF 353 (402)
T ss_pred HHhcCCCEEEeCCccccCCCeEEEEEeC--cCHHHHHHhc--CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEE
Confidence 776641110 1122211 1223444443 3655442210 1368999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 244 LPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 244 ~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
++....|++|||++++.|.++++.+.
T Consensus 354 S~~~~~t~edid~l~~~l~~~~~~~~ 379 (402)
T TIGR02006 354 TIGRFTTEEEIDYAVKLVKSAIDKLR 379 (402)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987764
No 213
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.34 E-value=5.5e-11 Score=110.94 Aligned_cols=170 Identities=14% Similarity=0.132 Sum_probs=112.1
Q ss_pred CeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc----EEEeccccc-
Q psy11784 90 NIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD----IITVGKPMG- 163 (284)
Q Consensus 90 ~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD----iv~~sK~l~- 163 (284)
++.+|++ .| ++-.|. ..+.+-+++|.++|++||+++|.||+|..|-..+...-......-.++ +-+|||.++
T Consensus 176 ~~k~i~l~nP-~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~ 253 (409)
T PRK07590 176 KVDIIYLCFP-NNPTGT-VLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGF 253 (409)
T ss_pred CceEEEEeCC-CCCcCC-cCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCC
Confidence 4555655 44 555665 568999999999999999999999999877332320111111111122 236899997
Q ss_pred CCcceeEEEecHHHHHhc------------h--------h------------------------hhhHHHHHHHHHHHHH
Q psy11784 164 NGMPIGAVITSRKIAESL------------N--------C------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~------------~--------~------------------------l~~~~~~~~~l~~~L~ 199 (284)
.|+++|++++++++++.+ . . .+.++++.+++.+.|+
T Consensus 254 pGlRiG~~i~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 333 (409)
T PRK07590 254 TGTRCAYTVVPKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLE 333 (409)
T ss_pred cCceeEEEEcCHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999998887611 0 0 1133444555666665
Q ss_pred hc--------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 200 IN--------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 200 ~~--------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+. .|+++++.+. ......++++.++ ++||++.|+..+ .+.+|++ +..+++++++++++|.++
T Consensus 334 ~~~~~~~~~~g~~f~wi~~~-~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~--~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 334 SAGFEVYGGVNAPYIWVKTP-DGMSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS--AFGSRENVLEAMERIKKA 408 (409)
T ss_pred hcCCceecCCcceEEEEECC-CCCCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE--ccCCHHHHHHHHHHHHhh
Confidence 53 3446666663 3234567887776 569999987432 3589996 456899999999999765
No 214
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.33 E-value=1.7e-10 Score=108.38 Aligned_cols=180 Identities=9% Similarity=0.098 Sum_probs=119.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC-CCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG-AVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g-~~pDi 155 (284)
.+++++++.... ..|++-..... +...+ +++|+++|++||++|++|++|+ +|-.|-..+..+... -..|+
T Consensus 209 ~d~l~~~~~~~~---plvii~g~S~~-~~~~d----l~~i~eia~~~gA~L~VD~AH~-~Gligg~~~~~~~~~~~~~D~ 279 (493)
T PRK13580 209 YDEIAALAREFK---PLILVAGYSAY-PRRVN----FAKLREIADEVGAVLMVDMAHF-AGLVAGKVFTGDEDPVPHADI 279 (493)
T ss_pred HHHHHHHHhhcC---CEEEEeCcccc-CCCcC----HHHHHHHHHHcCCEEEEECchh-hceeccccchhhcCCCCCCcE
Confidence 577888776332 33444444333 33455 9999999999999999999997 333331111111111 14677
Q ss_pred E--EecccccCCcceeEEEecHHHHHhchh--------------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRKIAESLNC--------------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
+ |++|++.|.. .|++++++++.+.+.. .+++.++.++|++.|++.
T Consensus 280 vtgT~hKaL~GP~-GG~I~~~~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~ 358 (493)
T PRK13580 280 VTTTTHKTLRGPR-GGLVLAKKEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR 358 (493)
T ss_pred EEeCChhhccCCC-eEEEEecHHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc
Confidence 6 5679996421 3788888888877632 236667888888888874
Q ss_pred cC----------ceeEEEEecccHH-HHHHHHHHHHCCcEEeecC----C-C---CCEEEEEcCC----CCCHHHHHHHH
Q psy11784 202 LH----------IFWCLILLSITYY-LYRYTRRMKEAKIIVANEG----E-Y---GNVLLFLPAM----CLTTENVLFIV 258 (284)
Q Consensus 202 ~G----------~~~~i~~~~~~~~-~~~~~~~l~~~Gv~~~~~~----~-~---~~~lr~~p~l----~~t~~~id~~~ 258 (284)
| .++.+.+ ++... ...+.+.|.++||++.+.. + + ...||+.++. .++++|+++++
T Consensus 359 -G~~vv~ggTdshIV~V~l-g~~~~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~ia 436 (493)
T PRK13580 359 -GARLVTGGTDNHLVLIDV-TSFGLTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVA 436 (493)
T ss_pred -CCCccCCCCCCCEEEEEe-CCHHHHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHH
Confidence 3 2334444 33333 3467778999999997431 1 1 4689999988 55799999999
Q ss_pred HHHHHHHHHH
Q psy11784 259 STLNRIFTSL 268 (284)
Q Consensus 259 ~~l~~~l~~~ 268 (284)
+.|.++++..
T Consensus 437 d~l~~~l~~~ 446 (493)
T PRK13580 437 ELIVKVLSNT 446 (493)
T ss_pred HHHHHHHHhh
Confidence 9999988754
No 215
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.32 E-value=1e-10 Score=108.50 Aligned_cols=168 Identities=17% Similarity=0.186 Sum_probs=114.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|+++-+.+..|.+.+ +++|.++|++||+++|+||+|+ .| .+. .... ...+|++
T Consensus 146 ~~~l~~~i~---~~~~lv~i~~~~n~tG~~~~----~~~i~~~~~~~~~~~ivD~a~~-~~-~~~--~~~~--~~~~d~~ 212 (397)
T TIGR01976 146 PDDLASLLS---PRTRLVAVTAASNTLGSIVD----LAAITELVHAAGALVVVDAVHY-AP-HGL--IDVQ--ATGADFL 212 (397)
T ss_pred HHHHHHhcC---CCceEEEEeCCCCCCCccCC----HHHHHHHHHHcCCEEEEehhhh-cc-ccC--CCHH--HcCCCEE
Confidence 566776664 45788888888888898877 9999999999999999999996 32 121 2222 2346776
Q ss_pred --EecccccCCcceeEEEecHHHHHhchh------------------------------hhh------------------
Q psy11784 157 --TVGKPMGNGMPIGAVITSRKIAESLNC------------------------------LDD------------------ 186 (284)
Q Consensus 157 --~~sK~l~~G~p~gav~~~~~i~~~~~~------------------------------l~~------------------ 186 (284)
+++|.+| .++|++++++++++.+.. ++.
T Consensus 213 ~~s~~K~~g--~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~ 290 (397)
T TIGR01976 213 TCSAYKFFG--PHMGILWGRPELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVA 290 (397)
T ss_pred EEechhhcC--CceEEEEEcHHHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhH
Confidence 4569874 568999999988765432 111
Q ss_pred --------HHHHHHHHHHHHHhccCc-------------eeEEEEecccHHHHHHHHHHHHCCcEEeecC----------
Q psy11784 187 --------NRPSGKYLVRPLGINLHI-------------FWCLILLSITYYLYRYTRRMKEAKIIVANEG---------- 235 (284)
Q Consensus 187 --------~~~~~~~l~~~L~~~~G~-------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------- 235 (284)
..+..+++++.|+++.++ ++.+.+ .......+.+.|.++||++..+.
T Consensus 291 ~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~ 368 (397)
T TIGR01976 291 SFQAIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTV--HGLPPQRVVRRLADQGIDAWAGHFYAVRLLRRL 368 (397)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEe--CCcCHHHHHHHHHHCCeEEEeCccchHHHHHHh
Confidence 122455555666553111 111111 12245679999999999998651
Q ss_pred ---CCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 236 ---EYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 236 ---~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
...+.+|+++...+|++|++++++.|
T Consensus 369 ~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 369 GLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred CCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 12468999999999999999999864
No 216
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.32 E-value=3.3e-10 Score=104.63 Aligned_cols=178 Identities=13% Similarity=0.121 Sum_probs=117.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++..+.+..|.+.+ +++|.++|++||+++++|++|+ +|.. ........+|++
T Consensus 130 ~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~~ivD~a~~-~g~~-----~~~~~~~~~D~~ 196 (382)
T TIGR03403 130 AEQVREAIT---EKTALVSVMWANNETGMIFP----IKEIGEICKERGVLFHTDAVQA-IGKI-----PVDVQKAGVDFL 196 (382)
T ss_pred HHHHHHhcc---cCCeEEEEEcccCCCccccC----HHHHHHHHHHcCCEEEEechhh-cCCC-----ccCccccCCCEE
Confidence 566776664 34677888888888898887 8999999999999999999986 3311 112223457888
Q ss_pred Eec--ccccCCcceeEEEecHHHH--Hhc---------hh-------------------------hhhHHHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIA--ESL---------NC-------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~--~~~---------~~-------------------------l~~~~~~~~~l~~~L 198 (284)
++| |.+|. -.+|++..++... ..+ .. .++.++..+++.+.|
T Consensus 197 ~~s~~K~~gp-~G~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~~L 275 (382)
T TIGR03403 197 SFSAHKFHGP-KGVGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDAL 275 (382)
T ss_pred EEcchhhCCC-CceEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 887 96431 1256665543320 000 00 124555667777777
Q ss_pred HhccC------------ceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEEEc
Q psy11784 199 GINLH------------IFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLFLP 245 (284)
Q Consensus 199 ~~~~G------------~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~~p 245 (284)
+++.| .++.+.+. ......+.+.|.++||.++.+.. ..+.+|+++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~ 353 (382)
T TIGR03403 276 LELPDVFVVGDREHRVPNTILISIK--GVEGEAMLWDLNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSL 353 (382)
T ss_pred hcCCCEEEECCCCCCcCCEEEEEeC--CCCHHHHHHhhccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEEC
Confidence 65411 12223321 12355677778899999985310 125799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 246 AMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
....|++|||++++.|+++++++..
T Consensus 354 ~~~~t~~did~~~~~l~~~~~~~~~ 378 (382)
T TIGR03403 354 SRFTTEEEIDYTIEVFKKAVQRLRA 378 (382)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999887653
No 217
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.32 E-value=8.3e-10 Score=103.15 Aligned_cols=177 Identities=14% Similarity=0.165 Sum_probs=110.7
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.+... ++.+|++ .+.. |...+ +++|.++|++||+++|+||+|. +|..+.+... ...+ ..|+
T Consensus 154 ~~~l~~~i~~~--~~k~v~~~~~~~---~~~~~----~~~I~~la~~~~~~livD~a~~-~g~~~~g~~~-~~~~-~~di 221 (416)
T PRK00011 154 YDEVEKLALEH--KPKLIIAGASAY---SRPID----FKRFREIADEVGAYLMVDMAHI-AGLVAAGVHP-SPVP-HADV 221 (416)
T ss_pred HHHHHHHHHhc--CCCEEEECCCcC---CCccC----HHHHHHHHHHcCCEEEEECcch-hcccccCccC-CCCC-CCcE
Confidence 57788877632 3445555 4433 33333 8999999999999999999985 2222210001 1112 3576
Q ss_pred E--EecccccCCcceeEEEec-HHHHHhchh---------------------------------hhhHHHHHHHHHHHHH
Q psy11784 156 I--TVGKPMGNGMPIGAVITS-RKIAESLNC---------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~-~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~ 199 (284)
+ +++|+++ |.+.|+++++ +++.+.+.. .++.+++.+++++.|+
T Consensus 222 ~~~S~~K~l~-g~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 300 (416)
T PRK00011 222 VTTTTHKTLR-GPRGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALA 300 (416)
T ss_pred EEecCCcCCC-CCCceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 5 5679994 4677899985 677766543 1244555667777776
Q ss_pred hccCc----------eeEEEEecccHHHHHHHHHHHHCCcEEeecC-------C-CCCEEEEEcC----CCCCHHHHHHH
Q psy11784 200 INLHI----------FWCLILLSITYYLYRYTRRMKEAKIIVANEG-------E-YGNVLLFLPA----MCLTTENVLFI 257 (284)
Q Consensus 200 ~~~G~----------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~-~~~~lr~~p~----l~~t~~~id~~ 257 (284)
++ |+ ++.+.+.+.......+.+.|.++||.+.... + ..+.+|+... ..+|++|++++
T Consensus 301 ~~-g~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l 379 (416)
T PRK00011 301 ER-GFRVVSGGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEI 379 (416)
T ss_pred hC-CCeeeecCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHH
Confidence 63 32 2223331111145678888899999997321 1 2346888432 35789999999
Q ss_pred HHHHHHHHHH
Q psy11784 258 VSTLNRIFTS 267 (284)
Q Consensus 258 ~~~l~~~l~~ 267 (284)
++.|++++..
T Consensus 380 ~~~l~~~~~~ 389 (416)
T PRK00011 380 AELIADVLDN 389 (416)
T ss_pred HHHHHHHHhc
Confidence 9999998765
No 218
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.32 E-value=5.4e-10 Score=102.44 Aligned_cols=178 Identities=17% Similarity=0.122 Sum_probs=113.5
Q ss_pred HHHHHHHHHhc----CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCC
Q psy11784 77 AQAARNIMEAH----RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~----~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~ 152 (284)
.+++++.++.. ..++.+|++....+..|...+ +++|.++|++||+++|+||+|. +|... +....++..
T Consensus 122 ~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~----~~~i~~~~~~~~~~vivD~a~~-~g~~~---~~~~~~~~d 193 (361)
T cd06452 122 PEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD----AKKIAKVCHEYGVPLLLNGAYT-VGRMP---VSGKELGAD 193 (361)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc----HHHHHHHHHHcCCeEEEECCcc-cCCcC---CCHHHcCCC
Confidence 56677766522 135777777766666776655 8999999999999999999996 33221 222233432
Q ss_pred CcEEEecccccCCcceeEEEecHHHHHhchh----------------------------hh----------hHHHHHHHH
Q psy11784 153 PDIITVGKPMGNGMPIGAVITSRKIAESLNC----------------------------LD----------DNRPSGKYL 194 (284)
Q Consensus 153 pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------l~----------~~~~~~~~l 194 (284)
-.+.+++|+++++.++|++++++++++.+.. ++ +..++.+++
T Consensus 194 ~~~~s~~K~l~~~~~~G~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~l 273 (361)
T cd06452 194 FIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGAPLVTLMASFPHVKERVKRWDEEVEKARWF 273 (361)
T ss_pred EEEecCCccccCCCCeEEEEECHHHHHHHhccccccccceeeeeccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2334678999877789999999888776421 11 111233566
Q ss_pred HHHHHhccCcee-----------EEEEecc--------cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 195 VRPLGINLHIFW-----------CLILLSI--------TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 195 ~~~L~~~~G~~~-----------~i~~~~~--------~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
.+.|+++.|+-+ .++. +. .....++.+.|+++||+....+ .++.+|+.. +.+|+++++
T Consensus 274 ~~~L~~l~g~~v~~~~~~~~n~~~~~~-~~~~~~~~~~~~~~~~~~~~L~~~gI~~~~~~-~~~~~ri~~-~g~~~e~~~ 350 (361)
T cd06452 274 VAELEKIEGIKQLGEKPKNHDLMFFET-PSFDEIAKKHKRRGYFLYSELKKRGIHGIKPG-LTRYFKLST-YGLTWEQVE 350 (361)
T ss_pred HHHHhcCCCeEEECCCCCCCceEEEEc-CCcchhhhhccccchhHHHHHHHcCceEEcCC-CceEEEEEe-cCCCHHHHH
Confidence 666665424321 1111 10 1112368899999999965332 235788875 447999999
Q ss_pred HHHHHHHHHH
Q psy11784 256 FIVSTLNRIF 265 (284)
Q Consensus 256 ~~~~~l~~~l 265 (284)
.+++.|+++.
T Consensus 351 ~l~~al~~~~ 360 (361)
T cd06452 351 YVVDAFKEIA 360 (361)
T ss_pred HHHHHHHHHh
Confidence 9999998653
No 219
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.32 E-value=3.1e-11 Score=111.00 Aligned_cols=179 Identities=15% Similarity=0.081 Sum_probs=119.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI- 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi- 155 (284)
++++++.++ +++.+|++...++..|.+ .+.+.+++|.++|++++ ++|+||+|..|-..+...-......-.+.+
T Consensus 141 ~~~l~~~~~---~~~~~v~i~~P~NPTG~~-~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi 215 (366)
T PRK01533 141 LDEISSVVD---NDTKIVWICNPNNPTGTY-VNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNIL 215 (366)
T ss_pred HHHHHHHhC---cCCcEEEEeCCCCCCCCC-cCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEE
Confidence 566776664 234455554436667765 47888999999998877 577799998763222100011111112333
Q ss_pred --EEeccccc-CCcceeEEEecHHHHHhchh------------------------h----hhHHHHHHHHHHHHHhc---
Q psy11784 156 --ITVGKPMG-NGMPIGAVITSRKIAESLNC------------------------L----DDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 156 --v~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------------l----~~~~~~~~~l~~~L~~~--- 201 (284)
-+|||.++ .|+++|++++++++++.+.. + +..++..+++.+.++.+
T Consensus 216 ~~~SfSK~~~l~GlRiG~~i~~~~~~~~l~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g~~ 295 (366)
T PRK01533 216 VLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLPFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENEIP 295 (366)
T ss_pred EEeCchHHhcChHHHHhHHhCCHHHHHHHHHhcCCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 36899998 79999999999999887754 1 12233344444555443
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|.++++.+ + ....+.+.|+++||++++ +.+.+|++ .-+.++.+.++++|+++++....
T Consensus 296 ~~~~~~nf~~~~~-~---~~~~~~~~l~~~GI~Vr~---~~~~iRis---~~~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 296 FYQSQTNFIFLPV-E---NGGEIYEACAHAGFIIRP---FPNGVRIT---VGTREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred cCCCcCcEEEEeC-C---CHHHHHHHHHHCCcEEcc---CCCceEEe---CCCHHHHHHHHHHHHHHHHhccc
Confidence 455666665 3 246789999999999996 35789996 56899999999999998876543
No 220
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.31 E-value=7.9e-11 Score=109.61 Aligned_cols=171 Identities=12% Similarity=0.164 Sum_probs=112.3
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc-cccCC---CCcEEEeccccc-C
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF-QTQGA---VPDIITVGKPMG-N 164 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~-~~~g~---~pDiv~~sK~l~-~ 164 (284)
++.+|++-.-++-.|. ..+.+.+++|.++|++||+++|.||+|..|-..+...... ...+. .-.+-+|||.++ .
T Consensus 173 ~~~~i~l~nP~NPTG~-~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~p 251 (402)
T TIGR03542 173 KIDIIYLCSPNNPTGT-VLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFT 251 (402)
T ss_pred CceEEEEeCCCCCCCc-cCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCC
Confidence 4566665444555665 6689999999999999999999999999773322101111 11111 122347899997 7
Q ss_pred CcceeEEEecHHHH--------Hhchh--------------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 165 GMPIGAVITSRKIA--------ESLNC--------------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 165 G~p~gav~~~~~i~--------~~~~~--------------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
|+++|+++++++++ ..+.. .+.++++.+++.+.|++.
T Consensus 252 GlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~ 331 (402)
T TIGR03542 252 GVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAAGFK 331 (402)
T ss_pred CcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhcCce
Confidence 99999999988765 22100 112334445566666543
Q ss_pred -----cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 -----LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 -----~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+ +......++++.|+ ++||++.++..+ .+++|++ +..+++++++++++|.++
T Consensus 332 ~~~~~~~~f~~v~l-~~~~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis--~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 332 VYGGEHAPYLWVKT-PEGISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFS--AFGKRENIVEACERIKEA 401 (402)
T ss_pred ecCCCceeEEEEEC-CCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEE--ecCCHHHHHHHHHHHHhh
Confidence 234666666 33234567888877 569999987432 3689997 445899999999999765
No 221
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.31 E-value=1.2e-10 Score=107.25 Aligned_cols=171 Identities=13% Similarity=0.146 Sum_probs=112.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++.+|++|.+.+..|.+.+ +++|.++|++||+++|+|+++... .. .......+|++
T Consensus 115 ~~~l~~~i~---~~~~~v~~e~~~np~g~~~d----l~~i~~la~~~g~~livD~t~~~~-~~------~~~~~~g~Div 180 (369)
T cd00614 115 PEALEAAIK---PETKLVYVESPTNPTLKVVD----IEAIAELAHEHGALLVVDNTFATP-YL------QRPLELGADIV 180 (369)
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcch-hc------CChhhhCCcEE
Confidence 456666664 36889999999999898877 999999999999999999998521 11 11122346877
Q ss_pred --EecccccC-C-cceeEEEecH-HHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 --TVGKPMGN-G-MPIGAVITSR-KIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 --~~sK~l~~-G-~p~gav~~~~-~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++| | ...|++++++ ++++.+.. +++..++.+++.+.|++.
T Consensus 181 v~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~~~~~~na~~la~~L~~~~~v 260 (369)
T cd00614 181 VHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLRMERHSENALKVAEFLEKHPKV 260 (369)
T ss_pred EeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 67899986 4 6789999977 77665543 335566677777777754
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHHHC--Cc--------EEeec--------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMKEA--KI--------IVANE-------------- 234 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~--Gv--------~~~~~-------------- 234 (284)
.|.++.+++.+..+.+.+|++.|.-- |. +..|.
T Consensus 261 ~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 340 (369)
T cd00614 261 ERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAA 340 (369)
T ss_pred cEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHh
Confidence 25567777743334555666555421 11 11110
Q ss_pred -CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 235 -GEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 235 -~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
+...+.+|++.-+ |+.+.+++-|++++
T Consensus 341 ~g~~~~liR~svGl----E~~~dl~~dl~~al 368 (369)
T cd00614 341 AGITPGLVRLSVGI----EDVEDLIADLEQAL 368 (369)
T ss_pred cCCCCCeEEEEeCc----CCHHHHHHHHHHhh
Confidence 1113577875444 67777887777765
No 222
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.31 E-value=2.3e-10 Score=104.10 Aligned_cols=169 Identities=19% Similarity=0.160 Sum_probs=109.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++++++.+. +++++|++..+ .|...+ +++|+++|++||+++|+|++|+ +|... .....+...|+.
T Consensus 96 ~~~l~~~i~---~~~~~v~~~~~---~G~~~~----~~~i~~l~~~~~i~li~D~a~~-~g~~~----~~~~~~~~~d~~ 160 (352)
T cd00616 96 PELIEAAIT---PRTKAIIPVHL---YGNPAD----MDAIMAIAKRHGLPVIEDAAQA-LGATY----KGRKVGTFGDAG 160 (352)
T ss_pred HHHHHHhcC---cCCeEEEEECC---CCCcCC----HHHHHHHHHHcCCeEEEECCCC-CCCeE----CCEEcccCccee
Confidence 566776663 45777877654 454444 8999999999999999999997 33221 111233346777
Q ss_pred Eec----ccccCCcceeEEEec-HHHHHhchh------------------------------------------hhhHHH
Q psy11784 157 TVG----KPMGNGMPIGAVITS-RKIAESLNC------------------------------------------LDDNRP 189 (284)
Q Consensus 157 ~~s----K~l~~G~p~gav~~~-~~i~~~~~~------------------------------------------l~~~~~ 189 (284)
++| |++++| +.|+++++ +++.+.+.. .++.++
T Consensus 161 ~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~ 239 (352)
T cd00616 161 AFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRRE 239 (352)
T ss_pred EEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHH
Confidence 776 999644 45667765 455432210 235556
Q ss_pred HHHHHHHHHHhccCc--------------eeEEEEecc--cHHHHHHHHHHHHCCcEEeecCC-----------------
Q psy11784 190 SGKYLVRPLGINLHI--------------FWCLILLSI--TYYLYRYTRRMKEAKIIVANEGE----------------- 236 (284)
Q Consensus 190 ~~~~l~~~L~~~~G~--------------~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~----------------- 236 (284)
+.+++++.|+++.|+ ++.+.+ +. ......+.+.|.++||.+....+
T Consensus 240 ~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~ 318 (352)
T cd00616 240 IAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRL-DPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPPG 318 (352)
T ss_pred HHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEE-CCcCCCCHHHHHHHHHHCCCCeeeecCccccCHhhhhccCCCcC
Confidence 677777777764111 222222 22 34677899999999997652110
Q ss_pred -C-------CCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 237 -Y-------GNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 237 -~-------~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
. .+.+|+.+....|++|++.++++|+
T Consensus 319 ~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 319 DLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 0 1579998888899999999998873
No 223
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.31 E-value=1.1e-10 Score=106.65 Aligned_cols=175 Identities=19% Similarity=0.261 Sum_probs=120.6
Q ss_pred HHHHHHHHHhcCCCeeE-EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc-
Q psy11784 77 AQAARNIMEAHRDNIAT-LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaa-vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD- 154 (284)
++.+.+.+. +++.. +|..|-.= .|. ..+.+.++++.+.|.+ +.+||+||++.-|.. . -+..... .++
T Consensus 135 ~~~~~~~~~---~~~~lv~i~nPNNP-TG~-~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~--~--~~~~l~~-~~~n 203 (356)
T COG0079 135 LDAILAAIR---DKTKLVFLCNPNNP-TGT-LLPREELRALLEALPE-GGLVVIDEAYIEFSP--E--SSLELLK-YPPN 203 (356)
T ss_pred HHHHHHhhh---cCCCEEEEeCCCCC-CCC-CCCHHHHHHHHHhCCC-CcEEEEeCchhhcCC--c--hhhhhcc-CCCC
Confidence 344444443 34444 45556433 454 3467778888888888 999999999998854 2 1222222 344
Q ss_pred EE---Eeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 155 II---TVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 155 iv---~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
++ ||||++| .|+++|++++++++++.+.. .+++.+..+++.+.|+.+
T Consensus 204 livlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~p~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~ 283 (356)
T COG0079 204 LIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRPPFNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG 283 (356)
T ss_pred EEEEEecHHhhhcchhceeeccCCHHHHHHHHHhcCCCCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 43 8999999 68999999999999998876 235666677777777763
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+-|+.+.+ +... +..+.+.|+++||+++.+.. ..+++|++ +-|++|-+.++++|.++++.
T Consensus 284 ~~~v~pS~aNFvlv~~-~~~~-~~~l~~~L~~~giivR~~~~~~~~~~~lRit---vgt~een~~ll~AL~~~~~~ 354 (356)
T COG0079 284 LFGVFPSQANFVLVRV-PDAE-AAALAEALLKKGILVRDCSSVGLLPGYLRIT---VGTPEENDRLLAALREVLKG 354 (356)
T ss_pred CCeecCCCCcEEEEEC-CCcc-HHHHHHHHHHCCEEEEeCCCCCCCCCeEEEE---eCCHHHHHHHHHHHHHHHhc
Confidence 122333333 3334 66899999999999998743 34699996 56889999999999888754
No 224
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.31 E-value=5.6e-10 Score=103.72 Aligned_cols=177 Identities=15% Similarity=0.155 Sum_probs=111.1
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccc-ccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQ-CGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~-tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+... ++.+|+ ..|.. |...+ +++|.++|++||+++|+||+| .|+...|. . .. ... ..|
T Consensus 150 ~~~l~~~i~~~--~~~~v~~~~~~~---~~~~~----~~~I~~l~~~~~~~li~D~a~~~g~~~~g~-~-~~-~~~-~~d 216 (402)
T cd00378 150 YDALEKMALEF--KPKLIVAGASAY---PRPID----FKRFREIADEVGAYLLVDMAHVAGLVAGGV-F-PN-PLP-GAD 216 (402)
T ss_pred HHHHHHHHHhC--CCCEEEecCccc---CCCcC----HHHHHHHHHhcCCEEEEEccchhhhhhccc-C-CC-ccc-CCc
Confidence 57777777532 333444 46643 33333 899999999999999999997 34422232 1 11 111 357
Q ss_pred EE--EecccccCCcceeEEEecH-HHHHhchh---------------------------------hhhHHHHHHHHHHHH
Q psy11784 155 II--TVGKPMGNGMPIGAVITSR-KIAESLNC---------------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 155 iv--~~sK~l~~G~p~gav~~~~-~i~~~~~~---------------------------------l~~~~~~~~~l~~~L 198 (284)
++ +++|++ +|.+.|++++++ ++++.+.. .+++.++.+++.+.|
T Consensus 217 v~~~s~sK~l-~G~~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L 295 (402)
T cd00378 217 VVTTTTHKTL-RGPRGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEAL 295 (402)
T ss_pred EEEeccccCC-CCCCceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 65 568999 557789999876 77665533 123445555666666
Q ss_pred Hhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec----C----CCCCEEEEEcCCC----CCHHHHHHH
Q psy11784 199 GIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE----G----EYGNVLLFLPAMC----LTTENVLFI 257 (284)
Q Consensus 199 ~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~----~----~~~~~lr~~p~l~----~t~~~id~~ 257 (284)
++. .+.++++.+.+.......+.+.|.++||.+.+. . ...+.+|+.++.. ++++|++++
T Consensus 296 ~~~g~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~ 375 (402)
T cd00378 296 KERGFKVVSGGTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEI 375 (402)
T ss_pred HhCCCeEeecCCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHH
Confidence 653 122334444211223456777788899999642 1 1346899977664 479999999
Q ss_pred HHHHHHHHHH
Q psy11784 258 VSTLNRIFTS 267 (284)
Q Consensus 258 ~~~l~~~l~~ 267 (284)
++.|.+++++
T Consensus 376 ~~~l~~~~~~ 385 (402)
T cd00378 376 ADFIARALKD 385 (402)
T ss_pred HHHHHHHHhc
Confidence 9999987754
No 225
>KOG1368|consensus
Probab=99.31 E-value=2.9e-10 Score=98.38 Aligned_cols=242 Identities=16% Similarity=0.183 Sum_probs=155.1
Q ss_pred HHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCC---Cc------cc---cc-CCC--CCceEEccCCCCcCCCCCCC
Q psy11784 4 NDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISP---RA------FM---LS-SEK--KPWVHVIPFPDTYRGEFSAD 68 (284)
Q Consensus 4 ~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~---~~------~~---~~-~~~--~~~~~~~~~~~~~~~~~~~~ 68 (284)
++.=.+.|+.+ ||.--+...+|-.|+....+.-.. +. .. .. ++. ...++..|.-+. +++
T Consensus 59 ~rLE~~vA~l~-GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e-----~dg 132 (384)
T KOG1368|consen 59 NRLEQRVAELF-GKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNE-----NDG 132 (384)
T ss_pred HHHHHHHHHHh-CccceeeecccccccHHHHHHHhcCCCceEEeccchheeehhccChhhhccceeEeeeeC-----CCC
Confidence 44444556665 888888888999998877664321 11 00 00 111 122222221110 110
Q ss_pred chHHHHHHHHHHHHHHHhcC-----CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcc
Q psy11784 69 DPQAAQKYAQAARNIMEAHR-----DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHF 143 (284)
Q Consensus 69 ~~~~~~~~~~~l~~~i~~~~-----~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~ 143 (284)
.-.++++|+.+.... +....|.+|-.+...|..+.|-+|+.++.+||++||+-|.+|-+ |. |
T Consensus 133 -----tm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGA-----Ri---~ 199 (384)
T KOG1368|consen 133 -----TMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGA-----RI---F 199 (384)
T ss_pred -----eeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchh-----hh---h
Confidence 111788999887332 23789999999988888889999999999999999999999943 21 2
Q ss_pred ccccccCC-------CCcE--EEecccccCCcceeE-EEecHHHHHhchh-----------------------------h
Q psy11784 144 WAFQTQGA-------VPDI--ITVGKPMGNGMPIGA-VITSRKIAESLNC-----------------------------L 184 (284)
Q Consensus 144 ~a~~~~g~-------~pDi--v~~sK~l~~G~p~ga-v~~~~~i~~~~~~-----------------------------l 184 (284)
-+.-..|+ ..|- +||||+||. |+|. ++++++.++.... +
T Consensus 200 NAavasgV~vk~i~~~fDSVsiCLSKglgA--PVGSViVG~k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~~L 277 (384)
T KOG1368|consen 200 NAAVASGVPVKKICSAFDSVSICLSKGLGA--PVGSVIVGSKDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVPLL 277 (384)
T ss_pred hHHHHcCCCHHHHHHhhhhhhhhhhccCCC--CcccEEEccHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchHHH
Confidence 23333333 2343 599999986 5555 4567877765332 3
Q ss_pred hhHHHHHHHHHHHHHhcc----------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHH
Q psy11784 185 DDNRPSGKYLVRPLGINL----------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENV 254 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~~----------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~i 254 (284)
+..+++...+.+.++... --|..+++....-.+..+++.+.++|+++.++. ..++|+.....+|++++
T Consensus 278 ~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~--s~r~Rivlh~Qvt~~~v 355 (384)
T KOG1368|consen 278 RADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGA--SRRIRIVLHHQVTDEDV 355 (384)
T ss_pred HHHHHHHHHHHHHhccccceeeecchhhcceeeeecccccCCHHHHHHHHHHCCeEEeecc--ccceEEEEEEecCHHHH
Confidence 355566666666666531 112333332334467899999999999998643 45789999999999999
Q ss_pred HHHHHHHH-HHHHHH
Q psy11784 255 LFIVSTLN-RIFTSL 268 (284)
Q Consensus 255 d~~~~~l~-~~l~~~ 268 (284)
+..+..+. .++...
T Consensus 356 e~~~~~~~k~~~~q~ 370 (384)
T KOG1368|consen 356 EYVKSVLSKKFLKQL 370 (384)
T ss_pred HHHHHHHHHHHHhhc
Confidence 99999994 444443
No 226
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.31 E-value=8.6e-10 Score=102.68 Aligned_cols=181 Identities=9% Similarity=0.062 Sum_probs=125.7
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHH--HHHhCCEEEEecccccCccccCccccccccCCCC
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDY--IHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l--~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
.+++++.++... +++.+|++-......|.+.+ +++|.++ |+++|+++|+|++|+ +| . .-.+......
T Consensus 123 ~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~----~~~i~~l~~~~~~g~~~vvD~v~s-~g---~--~~id~~~~~~ 192 (401)
T PLN02409 123 LDILKSKLRQDTNHKIKAVCVVHNETSTGVTND----LAGVRKLLDCAQHPALLLVDGVSS-IG---A--LDFRMDEWGV 192 (401)
T ss_pred HHHHHHHHhhCcCCCccEEEEEeecccccccCC----HHHHHHHHhhhccCcEEEEEcccc-cC---C--ccccccccCc
Confidence 577888777422 25777877766667788887 8888888 999999999999997 43 1 1222222346
Q ss_pred cEEEe--cccccCCcceeEEEecHHHHHhch------------------------h------------------------
Q psy11784 154 DIITV--GKPMGNGMPIGAVITSRKIAESLN------------------------C------------------------ 183 (284)
Q Consensus 154 Div~~--sK~l~~G~p~gav~~~~~i~~~~~------------------------~------------------------ 183 (284)
|++++ .|++++...+|+++.+++.++.+. .
T Consensus 193 D~~~~s~~K~l~~P~G~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e 272 (401)
T PLN02409 193 DVALTGSQKALSLPTGLGIVCASPKALEASKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLE 272 (401)
T ss_pred cEEEEcCccccCcCCCcceeEECHHHHHHHhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHH
Confidence 77654 599987556899999988755421 0
Q ss_pred --hhhHHHHHHHHHHHHHhccCc-------------eeEEEEecccHHHHHHHHHHH-HCCcEEeecC-C-CCCEEEEEc
Q psy11784 184 --LDDNRPSGKYLVRPLGINLHI-------------FWCLILLSITYYLYRYTRRMK-EAKIIVANEG-E-YGNVLLFLP 245 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G~-------------~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~-~-~~~~lr~~p 245 (284)
.++.+++.+++++.|+++ |+ +.++.+ +.......+.+.|. ++|+.+..+. . .+..+|+..
T Consensus 273 ~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~~~-p~~~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~ 350 (401)
T PLN02409 273 NVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAVVV-PEGIDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGH 350 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEEeC-CCCCCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcC
Confidence 125556677777777664 21 122222 33334567877776 6699998653 2 367899999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 246 AMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.-.++.+++..++++|++++.++-
T Consensus 351 ~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 351 LGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcC
Confidence 888999999999999999998753
No 227
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.30 E-value=2.8e-10 Score=101.72 Aligned_cols=185 Identities=15% Similarity=0.136 Sum_probs=125.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-- 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-- 154 (284)
+++||+.+. .+.+..+|+-.-++-+| .+.+++.|.+|.+||++||+.+|.||+|+.+--.|.....+. .+.|+
T Consensus 147 ~~~LE~~~~--~~~vkl~iLCnPHNP~G-rvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a--~ls~~~a 221 (388)
T COG1168 147 FDALEKAFV--DERVKLFILCNPHNPTG-RVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFA--SLSERFA 221 (388)
T ss_pred HHHHHHHHh--cCCccEEEEeCCCCCCC-ccccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchh--hcChhhh
Confidence 788998887 23355555444355444 578999999999999999999999999998755552122221 23333
Q ss_pred ---EEEe--ccccc-CCcceeEEEec-HHHHHhchh--------------------------------hhhHHHHHHHHH
Q psy11784 155 ---IITV--GKPMG-NGMPIGAVITS-RKIAESLNC--------------------------------LDDNRPSGKYLV 195 (284)
Q Consensus 155 ---iv~~--sK~l~-~G~p~gav~~~-~~i~~~~~~--------------------------------l~~~~~~~~~l~ 195 (284)
+.+. ||+++ .|+-.+.++.+ +++.+.+.. ++-++.+.+++.
T Consensus 222 ~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~ 301 (388)
T COG1168 222 DNSITLTSASKTFNLAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVA 301 (388)
T ss_pred cceEEEeeccccccchhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHH
Confidence 3333 69998 58877877764 444333322 335666777777
Q ss_pred HHHHhc---------cCce-eEEEEecccHHHHHHHHHHHH-CCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHH
Q psy11784 196 RPLGIN---------LHIF-WCLILLSITYYLYRYTRRMKE-AKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVST 260 (284)
Q Consensus 196 ~~L~~~---------~G~~-~~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~ 260 (284)
+.|++. .|.+ .++++..-.....++.+.+++ .+|.+.++..+ .+.+|+ .+..+.+-+++++++
T Consensus 302 ~~l~~~~P~v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~Rl--N~acpr~~L~eal~r 379 (388)
T COG1168 302 DFLNKHLPGVKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRL--NFACPRAILEEALER 379 (388)
T ss_pred HHHHhhCCCcEEecCCCceeeeeeccccCCChHHHHHHHHHhhcEeccCCCccCcCCCceEEE--ecCCCHHHHHHHHHH
Confidence 777765 4544 467775333334567777775 48888876443 368888 578899999999999
Q ss_pred HHHHHHHH
Q psy11784 261 LNRIFTSL 268 (284)
Q Consensus 261 l~~~l~~~ 268 (284)
|.++++.+
T Consensus 380 i~~al~~~ 387 (388)
T COG1168 380 LKRALKKR 387 (388)
T ss_pred HHHHHhcc
Confidence 99888653
No 228
>PRK05839 hypothetical protein; Provisional
Probab=99.28 E-value=1e-10 Score=107.90 Aligned_cols=169 Identities=10% Similarity=0.060 Sum_probs=109.6
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc----C--CCCcE---EEecc
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ----G--AVPDI---ITVGK 160 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~----g--~~pDi---v~~sK 160 (284)
++.+|++-.-++-.|. ..+++.+++|.++|++||+++|.||+|..|...+. ..+.... + -.+.+ -+|||
T Consensus 155 ~~k~v~i~nP~NPTG~-~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~-~~s~~~~~~~~~~~~~~~vi~~~SfSK 232 (374)
T PRK05839 155 EVDLVILNSPNNPTGR-TLSLEELIEWVKLALKHDFILINDECYSEIYENTP-PPSLLEASILVGNESFKNVLVINSISK 232 (374)
T ss_pred cccEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCC-CCCHhhhhcccCccccCcEEEEecccc
Confidence 3555555333555666 55899999999999999999999999987732222 1111110 0 11233 36899
Q ss_pred ccc-CCcceeEEEecHHHHHhchh--------------------h---hhHHHHHHHHHHHHHhc----------cCcee
Q psy11784 161 PMG-NGMPIGAVITSRKIAESLNC--------------------L---DDNRPSGKYLVRPLGIN----------LHIFW 206 (284)
Q Consensus 161 ~l~-~G~p~gav~~~~~i~~~~~~--------------------l---~~~~~~~~~l~~~L~~~----------~G~~~ 206 (284)
.++ .|+++|++++++++++.+.. + +.+++..+.+++..+.+ .|+++
T Consensus 233 ~~~~~GlRiG~ii~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~gg~fi 312 (374)
T PRK05839 233 RSSAPGLRSGFIAGDASILKKYKAYRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREILGITIPPATFYV 312 (374)
T ss_pred ccCCccceeEEEecCHHHHHHHHHHHhhcCCCCChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhcCCCCCCeeEEE
Confidence 975 68999999999988876543 0 01222222222222211 45566
Q ss_pred EEEEecccHHHHHHHHHHHH-CCcEEeecCCC------CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 207 CLILLSITYYLYRYTRRMKE-AKIIVANEGEY------GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 207 ~i~~~~~~~~~~~~~~~l~~-~Gv~~~~~~~~------~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++.+. ...+++++|++ +||.+.|+..+ .+++|++. ..+++++.+++++|.++++
T Consensus 313 ~~~~~----~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~--~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 313 WLPVD----NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIAL--VYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred EEeCC----ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHhh
Confidence 66663 24578888875 99999986432 37899975 4579999999999988764
No 229
>PRK09105 putative aminotransferase; Provisional
Probab=99.28 E-value=5.2e-10 Score=103.07 Aligned_cols=161 Identities=16% Similarity=0.187 Sum_probs=108.7
Q ss_pred EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE---Eeccccc-CCcce
Q psy11784 93 TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII---TVGKPMG-NGMPI 168 (284)
Q Consensus 93 avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv---~~sK~l~-~G~p~ 168 (284)
.++..| ++..|.. .+.+.++++.+.|+ +|+++|+||+|..|+. +. ...+..+..++++ +|||.+| .|+++
T Consensus 169 v~l~nP-~NPTG~~-~~~~~l~~l~~~~~-~~~~lIvDEaY~~f~~-~~--s~~~~~~~~~~vi~~~SfSK~~g~~GlRi 242 (370)
T PRK09105 169 IYICNP-NNPTGTV-TPRADIEWLLANKP-AGSVLLVDEAYIHFSD-AP--SVVDLVAQRKDLIVLRTFSKLYGMAGMRL 242 (370)
T ss_pred EEEeCC-CCCCCcC-cCHHHHHHHHHhCC-CCcEEEEECchHHhcc-Cc--chHHHHhhCCCEEEEecccHhhcCCccce
Confidence 344555 5666765 57788888888764 5999999999976642 11 1112222235544 6899998 69999
Q ss_pred eEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEEEeccc
Q psy11784 169 GAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLILLSIT 214 (284)
Q Consensus 169 gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~~~~ 214 (284)
|++++++++++.+.. .++++++.+++.+.|++. .|.++.+.+ +
T Consensus 243 G~~v~~~~~i~~l~~~~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~~~f~~~~~-~-- 319 (370)
T PRK09105 243 GLAAARPDLLAKLARFGHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKGYKCTPSQANCFMVDV-K-- 319 (370)
T ss_pred eeeecCHHHHHHHHhcCCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCcEEEEeC-C--
Confidence 999999988876543 124555666677777664 344444444 2
Q ss_pred HHHHHHHHHHHHCCcEEeecC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEG-EYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++++.|.++||.+.... ...+++|++.. ++++++.+++.|++++
T Consensus 320 ~~~~~l~~~L~~~gI~v~~~~~~~~~~~Ris~~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 320 RPAKAVADAMAKQGVFIGRSWPIWPNWVRVTVG---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred CCHHHHHHHHHHCCcEEecCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 245789999999999984321 13578999744 6888999998887764
No 230
>PRK10534 L-threonine aldolase; Provisional
Probab=99.27 E-value=2.3e-10 Score=103.69 Aligned_cols=175 Identities=13% Similarity=0.210 Sum_probs=112.9
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc---cCccccccccC
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS---GSHFWAFQTQG 150 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~---G~~~~a~~~~g 150 (284)
++++++.+... ..++.+|+++.-. .|. +.+.+.+++|.++|++||++|++||++. |+.. +. ... ....
T Consensus 113 ~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~-v~~~~~l~~i~~~~~~~~~~lvvDEA~~-~~~~~~~~~-~~~-~~~~ 186 (333)
T PRK10534 113 LDKVAAKIKPDDIHFARTRLLSLENTH--NGK-VLPREYLKQAWEFTRERNLALHVDGARI-FNAVVAYGC-ELK-EITQ 186 (333)
T ss_pred HHHHHHhhcccCcCcccceEEEEecCC--CCe-ecCHHHHHHHHHHHHHcCCeEEeeHHHH-HHHHHHcCC-CHH-HHHh
Confidence 56676666421 0146677777422 365 4578889999999999999999999876 4322 21 110 0011
Q ss_pred CCCc--EEEecccccCCccee-EEEecHHHHHhchh----------------------hh-------hHHHHHHHHHHHH
Q psy11784 151 AVPD--IITVGKPMGNGMPIG-AVITSRKIAESLNC----------------------LD-------DNRPSGKYLVRPL 198 (284)
Q Consensus 151 ~~pD--iv~~sK~l~~G~p~g-av~~~~~i~~~~~~----------------------l~-------~~~~~~~~l~~~L 198 (284)
.+| +++|||+++ +++| ++++++++++.+.. ++ +..+..+++.+.|
T Consensus 187 -~~~~~~~s~SK~~~--~~~G~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L 263 (333)
T PRK10534 187 -YCDSFTICLSKGLG--TPVGSLLVGNRDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQL 263 (333)
T ss_pred -cCCEEEEEeEcCCC--CcccceEEcCHHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 123 468999765 3577 57788988776643 11 1112334666667
Q ss_pred Hhc-------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 199 GIN-------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 199 ~~~-------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+++ .+.++.+.+ +. .....+.+.|+++||++.++ ..+|+...+.+|++++++++++|++++.
T Consensus 264 ~~~g~~~~~~~~nfv~~~~-~~-~~~~~~~~~l~~~gi~v~~~----~~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 264 REAGADVMRQDTNMLFVRV-GE-EQAAALGEYMRERNVLINAS----PIVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred HhCCCccCCCCceEEEEEC-Cc-hhHHHHHHHHHHcCeeecCC----ceEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 664 233444444 21 24567888899999999864 3678887777899999999999987653
No 231
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.27 E-value=1.4e-10 Score=106.11 Aligned_cols=169 Identities=15% Similarity=0.190 Sum_probs=110.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+. ++.+|++-.-.+..|. ..+.+.+++|.+.|++ ++++|+||+|..|..... . .......|.++
T Consensus 136 ~~~l~~~~~----~~~lv~l~nPnNPTG~-~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~~s-~--~~~~~~~~n~i 206 (351)
T PRK01688 136 LPAIADNLD----GVKVVYVCSPNNPTGN-LINPQDLRTLLELTRG-KAIVVADEAYIEFCPQAS-L--AGWLAEYPHLV 206 (351)
T ss_pred HHHHHHhcc----CCcEEEEeCCCCCCCC-CCCHHHHHHHHHhCCC-CcEEEEECchhhcCCCCC-h--HHHHhhCCCEE
Confidence 455655442 4455555433555676 4578888888888876 689999999987732111 1 11112234543
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh------------------h------------hhHHHHHHHHHHHHHhc-
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC------------------L------------DDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~------------------l------------~~~~~~~~~l~~~L~~~- 201 (284)
+|||.+| .|+++|++++++++++.+.. + +.+.+..+++.+.|+++
T Consensus 207 v~rSfSK~~glaGlRiGy~i~~~~~i~~l~~~~~~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 286 (351)
T PRK01688 207 ILRTLSKAFALAGLRCGFTLANEEVINLLLKVIAPYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIP 286 (351)
T ss_pred EEecchHhhcCHHHHHhHHhCCHHHHHHHHhccCCCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 7899998 78999999999999876654 1 12223345555666553
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
.+.++.+.+ + ...++.+.|+++||+++.++. ..+++|++.. +++|.+.++++|
T Consensus 287 ~~~~~~ps~~nfi~~~~-~---~~~~l~~~L~~~gi~vr~~~~~~~~~~~iRis~~---~~~e~~~l~~al 350 (351)
T PRK01688 287 CVEQVFDSETNYILARF-T---ASSAVFKSLWDQGIILRDQNKQPGLSNCLRITIG---TREECQRVIDAL 350 (351)
T ss_pred CCCeECCCCCcEEEEEc-C---CHHHHHHHHHHCCeEEEECCCcCCCCCeEEEeCC---CHHHHHHHHHhh
Confidence 123334433 2 357889999999999986542 2478999743 789999999876
No 232
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.26 E-value=6.9e-10 Score=102.04 Aligned_cols=172 Identities=12% Similarity=0.087 Sum_probs=114.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++++|++....+..|.+.+ +++|.++|++||+++|+|++|+ +|... +..+ ...+|++
T Consensus 127 ~~~l~~~~~---~~~~~v~~~~~~n~tG~~~~----~~~i~~l~~~~~~~livD~a~~-~g~~~---~~~~--~~~~D~~ 193 (376)
T TIGR01977 127 PERIKRAIK---TNTKLIVVSHASNVTGTILP----IEEIGELAQENGIFFILDAAQT-AGVIP---IDMT--ELAIDML 193 (376)
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCccccCC----HHHHHHHHHHcCCEEEEEhhhc-cCccC---CCch--hcCCCEE
Confidence 566666664 45778888888888898887 8999999999999999999996 44322 1112 2347887
Q ss_pred Eec--ccccCCcceeEEEecHHHH-Hh----------------------chh--------------------------hh
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIA-ES----------------------LNC--------------------------LD 185 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~-~~----------------------~~~--------------------------l~ 185 (284)
+++ |++++.-..|+++.+++.. .. +.. .+
T Consensus 194 ~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~ 273 (376)
T TIGR01977 194 AFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAK 273 (376)
T ss_pred EecccccccCCCCceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 655 9887533355555544320 00 000 12
Q ss_pred hHHHHHHHHHHHHHhccC-------------ceeEEEEecccHHHHHHHHHHHHC-CcEEeecC------------CCCC
Q psy11784 186 DNRPSGKYLVRPLGINLH-------------IFWCLILLSITYYLYRYTRRMKEA-KIIVANEG------------EYGN 239 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~~G-------------~~~~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~------------~~~~ 239 (284)
+.+++.+++.+.|++..| .++.+.+ + ......+.+.|.++ ||.+..+. ...+
T Consensus 274 ~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~-~-~~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~ 351 (376)
T TIGR01977 274 KECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTV-E-GIDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATG 351 (376)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEE-C-CCCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCC
Confidence 455666777777775411 2233333 2 22456788899887 99987542 1246
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 240 VLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 240 ~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.+|+.+...+|++|++.++++|++
T Consensus 352 ~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 352 TIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred eEEEecCCCCCHHHHHHHHHHHhh
Confidence 899999999999999999999864
No 233
>PLN02397 aspartate transaminase
Probab=99.24 E-value=1.4e-09 Score=101.95 Aligned_cols=176 Identities=19% Similarity=0.195 Sum_probs=107.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC--cccccccc-CCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS--HFWAFQTQ-GAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~--~~~a~~~~-g~~p 153 (284)
.+.+++.+....++..++++-.-++-.|. .++++.+++|.++|++||+++|.||+|.+|...+. .......+ ....
T Consensus 181 ~~~l~~~l~~~~~~~~~i~~~~P~NPTG~-v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 259 (423)
T PLN02397 181 FDGLLEDLKAAPDGSFVLLHACAHNPTGV-DPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGH 259 (423)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCC
Confidence 45566666533344555555544555675 55899999999999999999999999998843220 01111111 1112
Q ss_pred cEE---Eeccccc-CCcceeEEE--e-cHHHHH----hchh--------------------hh-----------------
Q psy11784 154 DII---TVGKPMG-NGMPIGAVI--T-SRKIAE----SLNC--------------------LD----------------- 185 (284)
Q Consensus 154 Div---~~sK~l~-~G~p~gav~--~-~~~i~~----~~~~--------------------l~----------------- 185 (284)
.++ +|||.++ .|+++|+++ + ++++++ .+.. ++
T Consensus 260 ~vI~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~ 339 (423)
T PLN02397 260 EILVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMAD 339 (423)
T ss_pred cEEEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 233 7899999 699999984 3 444332 2211 11
Q ss_pred hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 186 DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
.++++.+.+.+.|+++ .|+++++.+ ..++++.|+ +.||.+.+ ++ |++.. ..+++
T Consensus 340 ~~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~fl~~~l------~~~~~~~Ll~~~~V~v~~----~~--Ri~~~-~~~~~ 406 (423)
T PLN02397 340 RIISMRQKLYDALEARGSPGDWSHITKQIGMFSFTGL------NKEQVDRMTKEYHIYMTR----DG--RISMA-GLSSK 406 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCcccCCceEEEecCC------CHHHHHHHHHhCCEEECC----CC--eEEEe-eCCHH
Confidence 2334455555555542 122233332 135788886 56999973 23 77542 37999
Q ss_pred HHHHHHHHHHHHHH
Q psy11784 253 NVLFIVSTLNRIFT 266 (284)
Q Consensus 253 ~id~~~~~l~~~l~ 266 (284)
.+++++++|.++++
T Consensus 407 ~i~~~~~~i~~~~~ 420 (423)
T PLN02397 407 NVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999874
No 234
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.24 E-value=4e-10 Score=104.18 Aligned_cols=134 Identities=12% Similarity=0.129 Sum_probs=92.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++++|++|...+..|...+ +++|.++|+++|+++|+||+++.+ .... .....+|++
T Consensus 129 ~~~l~~~i~---~~tklV~le~p~np~g~~~d----l~~I~~la~~~gi~livD~a~~~~-~~~~------pl~~g~Div 194 (380)
T TIGR01325 129 LNAWEAAVK---PNTKLVFVETPSNPLGELVD----IAALAELAHAIGALLVVDNVFATP-VLQQ------PLKLGADVV 194 (380)
T ss_pred HHHHHHhcC---CCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-ccCC------chhhCCCEE
Confidence 455666554 45889999988887887776 999999999999999999998632 1111 123347888
Q ss_pred E--ecccccC-Ccce-eEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 T--VGKPMGN-GMPI-GAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 ~--~sK~l~~-G~p~-gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+ ++|.++| |..+ |++++++++++.+.. +++..+..+++.+.|++.
T Consensus 195 v~S~sK~l~g~g~~~gG~vv~~~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~ 274 (380)
T TIGR01325 195 VYSATKHIDGQGRVMGGVIAGSEELMAEVAVYLRHTGPAMSPFNAWVLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQ 274 (380)
T ss_pred EeeccceecCCCCeEEEEEEeCHHHHHHHHHHHHhhCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 5 7899987 5554 777778887665543 335555666666666653
Q ss_pred ----------------------cCceeEEEEecccHHHHHHHHHHH
Q psy11784 202 ----------------------LHIFWCLILLSITYYLYRYTRRMK 225 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~~~~~~~~~~~~l~ 225 (284)
.|.|+.+++. ..+.+.+|.+.|.
T Consensus 275 ~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~-~~~~~~~f~~~l~ 319 (380)
T TIGR01325 275 AVYYPGLPDHPQHELARRQQSGGGTVIGFDVA-DRAAAWKVLDAVE 319 (380)
T ss_pred EEECCCCCCCccHHHHHhhCCCCceEEEEEEC-CHHHHHHHHHcCC
Confidence 4668888885 4445666766653
No 235
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.24 E-value=1e-09 Score=101.09 Aligned_cols=178 Identities=13% Similarity=0.072 Sum_probs=113.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccccc-CCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQ-GAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~-g~~pDi 155 (284)
.+++++.+.. +..+|++...++..|.+ .+.+.+++|.++|++ ++++|+||++..|-..+......... ...+.+
T Consensus 149 ~~~l~~~~~~---~~~~v~l~~p~NPtG~~-~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~v 223 (371)
T PRK05166 149 LDALCAAVAR---APRMLMFSNPSNPVGSW-LTADQLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPW 223 (371)
T ss_pred HHHHHHhhhc---CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCE
Confidence 5667776652 33445553335556764 477788888888864 89999999998663212100111111 112233
Q ss_pred E---Eeccccc-CCcceeEEEe-cHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 156 I---TVGKPMG-NGMPIGAVIT-SRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 156 v---~~sK~l~-~G~p~gav~~-~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
+ +|||.++ .|+++|++++ ++++++.+.. ++.++++.+++.+.|++.
T Consensus 224 i~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g 303 (371)
T PRK05166 224 IVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG 303 (371)
T ss_pred EEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc
Confidence 3 6899999 8999999775 6777766543 123445556666777653
Q ss_pred ------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 202 ------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 202 ------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.|.++++.+. ....++++.|.++||++.++.. ..+.+|++.. ++++.+.+++.|+.++
T Consensus 304 ~~~~p~~g~fl~~~~~---~~~~~l~~~l~~~gi~v~p~~~~~~~~~iRi~~~---~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 304 YRIAPSRANFLFFDAR---RPASAVAEALLRQGVIVKPWKQPGFETFIRVSIG---SPEENDHFVAALDKVL 369 (371)
T ss_pred CeeCCCcCCEEEEeCC---CCHHHHHHHHHHCCeEEecCCCCCCCCeEEEEcC---CHHHHHHHHHHHHHHh
Confidence 4556666542 2357799999999999998643 2578999644 5777888888887654
No 236
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.23 E-value=3.8e-10 Score=102.98 Aligned_cols=160 Identities=19% Similarity=0.229 Sum_probs=103.9
Q ss_pred EEEEcceecCCCcccCChhHHHHHHHHHHHh-CCEEEEecccccCccccCccccccccCCCCc-EE--Eeccccc-CCcc
Q psy11784 93 TLICEPVFVVHGAVVPPPGWLSLMYDYIHEI-GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD-II--TVGKPMG-NGMP 167 (284)
Q Consensus 93 avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~-g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD-iv--~~sK~l~-~G~p 167 (284)
.++..| +.-.|...+ .+.+ .++++++ ++++|+||+|..|+. ...... ....+. ++ +|||.++ .|++
T Consensus 148 v~~~~P-~NPtG~~~~-~~~~---~~l~~~~~~~~livDe~y~~~~~--~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR 218 (353)
T PRK05387 148 IIFPNP-NAPTGIALP-LAEI---ERILAANPDSVVVIDEAYVDFGG--ESAIPL--IDRYPNLLVVQTFSKSRSLAGLR 218 (353)
T ss_pred EEEeCC-CCCCCCCCC-HHHH---HHHHHhCCCcEEEEeCcccccCC--cchHHH--HhhCCCEEEEEehhHhhcchhhh
Confidence 355666 666777654 4444 4445444 999999999987742 111111 111222 33 6899998 7999
Q ss_pred eeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEE
Q psy11784 168 IGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLI 209 (284)
Q Consensus 168 ~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~ 209 (284)
+|++++++++.+.+.. .++++++.+++.+.|++. .|.++++.
T Consensus 219 ~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g~~~~~~~~~~~~~~ 298 (353)
T PRK05387 219 VGFAIGHPELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALGFEVLPSKANFVFAR 298 (353)
T ss_pred ceeeecCHHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCCCeECCCcCcEEEEE
Confidence 9999999988766432 124455566666777653 23344444
Q ss_pred EecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 210 LLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 210 ~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+ + .....++++.|.++||.+.+.+. ..+.+|++.. +++++++++++|.+++.
T Consensus 299 ~-~-~~~~~~~~~~l~~~gi~v~~~~~~~~~~~iRis~~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 299 H-P-SHDAAELAAKLRERGIIVRHFNKPRIDQFLRITIG---TDEEMEALVDALKEILA 352 (353)
T ss_pred C-C-CCCHHHHHHHHHHCCEEEEECCCCCCCCeEEEEeC---CHHHHHHHHHHHHHHhh
Confidence 3 2 23467889999999999975432 2468999643 77999999999988753
No 237
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.23 E-value=2.3e-09 Score=98.31 Aligned_cols=161 Identities=12% Similarity=0.119 Sum_probs=102.0
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCCCcE---EEeccccc-CCc
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAVPDI---ITVGKPMG-NGM 166 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~pDi---v~~sK~l~-~G~ 166 (284)
..++..| ++-.|.... .++|.++++++++ +|+||+|..|...+. .-. .....-.+.+ -+|||.++ .|+
T Consensus 151 ~~~l~nP-~NPTG~~~~----~~~l~~l~~~~~~-~IiDE~y~~~~~~~~-~~s~~~~~~~~~~vi~i~S~SK~~~l~Gl 223 (360)
T PRK07392 151 GLLLNNP-HNPTGKLWS----REAILPLLEQFAL-VVVDEAFMDFLPPDA-EQSLIPCLAEYPNLIILRSLTKFYSLPGL 223 (360)
T ss_pred EEEEeCC-CCCCCCCcC----HHHHHHHHHHCCE-EEEECchhhhccCcc-ccchHHHhhcCCCEEEEEechhhhcCCch
Confidence 3445555 666787665 4567888889985 666999998854442 111 1111222333 37899999 899
Q ss_pred ceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------cCceeEEEE
Q psy11784 167 PIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--------LHIFWCLIL 210 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~i~~ 210 (284)
++|++++++++++.+.. .+.++++.+++.+.|+++ .|.++++.+
T Consensus 224 RiG~~v~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~fl~~~~ 303 (360)
T PRK07392 224 RLGYAIAHPDRLQRWQQWRDPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFLLVQS 303 (360)
T ss_pred heeeeeCCHHHHHHHHhhCCCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEECCCCCCEEEEEc
Confidence 99999999988876654 113445566666667654 344555554
Q ss_pred ecccHHHHHHHHHHH-HCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 211 LSITYYLYRYTRRMK-EAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 211 ~~~~~~~~~~~~~l~-~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
. ....++++.++ ++||.+.++..+ .+++|+... +.++.+++.+.|++++
T Consensus 304 ~---~~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~---~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 304 Q---GSALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVR---TEAENQRLLEALAAIL 357 (360)
T ss_pred C---CCHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeC---CHHHHHHHHHHHHHHh
Confidence 2 24567887765 679999987543 368999633 3455566666665544
No 238
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.23 E-value=2.1e-09 Score=99.83 Aligned_cols=174 Identities=16% Similarity=0.192 Sum_probs=104.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc-cCccccccc-cCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS-GSHFWAFQT-QGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G~~~~a~~~-~g~~pD 154 (284)
.+.+++.+........++++-.-++-.|. ..+++.+++|.++|++||+++|.||+|..|... +........ .+..+.
T Consensus 159 ~~~l~~~~~~~~~~~~~~i~~~p~NPTG~-~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 237 (396)
T PRK09257 159 FDAMLADLSQAPAGDVVLLHGCCHNPTGA-DLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLE 237 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCc
Confidence 56777777643333344444545666776 569999999999999999999999999987532 110111111 111223
Q ss_pred E---EEecccccC-CcceeEEEe---cHH----HHHhchh--------------------h-----------------hh
Q psy11784 155 I---ITVGKPMGN-GMPIGAVIT---SRK----IAESLNC--------------------L-----------------DD 186 (284)
Q Consensus 155 i---v~~sK~l~~-G~p~gav~~---~~~----i~~~~~~--------------------l-----------------~~ 186 (284)
+ -+|||.++- |+++|++++ +++ ++..+.. + ++
T Consensus 238 vi~i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 317 (396)
T PRK09257 238 LLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRER 317 (396)
T ss_pred EEEEEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3 378999995 999999973 333 3222211 1 02
Q ss_pred HHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHH-HHCCcEEeecCCCCCEEEEEcCCCCCHHH
Q psy11784 187 NRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRM-KEAKIIVANEGEYGNVLLFLPAMCLTTEN 253 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~ 253 (284)
++++.+.+.+.|++. .|+++++.+ + .+++..+ .++||.+.|. + ||..+ +.++++
T Consensus 318 ~~~rr~~l~~~L~~~~~~~~~~~~~p~gg~~~w~~l-~-----~~~~~~l~~~~~V~~~p~----~--ri~~~-~~~~~~ 384 (396)
T PRK09257 318 IKAMRQLLVEALKAKGPSRDFDFIARQRGMFSYSGL-T-----PEQVDRLREEFGVYAVGS----G--RINVA-GLNESN 384 (396)
T ss_pred HHHHHHHHHHHHHhcCCCCCcccccccceEEEecCC-C-----HHHHHHHHHcCCEEEcCC----C--eEEEe-eCCHHH
Confidence 233444444444432 223333433 1 1344444 5779998852 2 77543 379999
Q ss_pred HHHHHHHHHHH
Q psy11784 254 VLFIVSTLNRI 264 (284)
Q Consensus 254 id~~~~~l~~~ 264 (284)
|++++++|.++
T Consensus 385 i~~~~~~i~~~ 395 (396)
T PRK09257 385 IDYVAEAIAAV 395 (396)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 239
>PRK08354 putative aminotransferase; Provisional
Probab=99.22 E-value=1.1e-09 Score=98.54 Aligned_cols=172 Identities=15% Similarity=0.162 Sum_probs=107.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ ..-..++..| ++-.|. ..+.+.+++|.++|++||+++|.||++.+|...+. . .. ....--+-
T Consensus 108 ~~~l~~~~~---~~~~vi~~~P-~NPTG~-~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~-~--~~-~~~vi~~~ 178 (311)
T PRK08354 108 PEKLEELVE---RNSVVFFCNP-NNPDGK-FYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPE-S--PE-GENIIKLR 178 (311)
T ss_pred HHHHHHhhc---CCCEEEEecC-CCCCCC-ccCHHHHHHHHHHhhhcCcEEEEeCcchhcccccc-c--cC-CCcEEEEe
Confidence 455666554 2234667778 455676 56889999999999999999999999998743222 1 11 11111123
Q ss_pred Eeccccc-CCcceeEEEecHHHHHhchh---------------h----hhHHHHHHHHHHHHHhc--------cCceeEE
Q psy11784 157 TVGKPMG-NGMPIGAVITSRKIAESLNC---------------L----DDNRPSGKYLVRPLGIN--------LHIFWCL 208 (284)
Q Consensus 157 ~~sK~l~-~G~p~gav~~~~~i~~~~~~---------------l----~~~~~~~~~l~~~L~~~--------~G~~~~i 208 (284)
+|||.++ .|+++|++++-.+.+..+.. + +++++..+++++..+.+ .|.++.+
T Consensus 179 S~SK~~~l~GlRiG~~v~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 258 (311)
T PRK08354 179 TFTKSYGLPGIRVGYVKGFEEAFRSVRMPWSIGSTGYAFLEFLIEDDFEHLRKTMPLIWREKERFEKALYVKSDANFFIK 258 (311)
T ss_pred ccHhhcCCccceeeeeeehHHHHHHcCCCccCCHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence 6899999 89999999984333332211 1 12222233333333322 3444445
Q ss_pred EEecccHHHHHHHHHHHHCCcEEeecCCC--CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 209 ILLSITYYLYRYTRRMKEAKIIVANEGEY--GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 209 ~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
++ + ...++++.|.++||++.++..+ .+++||+. .++++.+++++.|+++
T Consensus 259 ~~-~---~~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~---~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 259 DV-G---DAEKFVEFLKRNGILVRDCTSFGLPGYIRFSV---RDREENEKLIRALREW 309 (311)
T ss_pred EC-C---CHHHHHHHHHHCCeEEEecccCCCCCeEEEEe---CCHHHHHHHHHHHHHh
Confidence 44 2 3467889999999999998654 37899963 3556677777777653
No 240
>KOG0256|consensus
Probab=99.22 E-value=1.6e-09 Score=97.33 Aligned_cols=187 Identities=17% Similarity=0.186 Sum_probs=130.5
Q ss_pred HHHHHHHHH---hcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc--CccccCccccccc---
Q psy11784 77 AQAARNIME---AHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG--MGRSGSHFWAFQT--- 148 (284)
Q Consensus 77 ~~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG--~gr~G~~~~a~~~--- 148 (284)
.++||+++. +.+..|.+||+-.-++.-|. ..+++-|..+.+.+.++++.||+|||++| |+..+ +-+...
T Consensus 210 v~alE~A~~~A~~~~~kVkGvlitNPsNPLG~-~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~--F~Sv~ev~~ 286 (471)
T KOG0256|consen 210 VEALEAALNQARKLGLKVKGVLITNPSNPLGT-TLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSE--FRSVLEVRK 286 (471)
T ss_pred HHHHHHHHHHHHHhCCceeEEEEeCCCCCCCC-ccCHHHHHHHHHHHhhcceEEEeehhhcccccCccC--ceEHHHHhh
Confidence 455666655 12334877765443444454 56899999999999999999999999986 44332 222211
Q ss_pred c-CCCCcE----EEeccccc-CCcceeEEEe-cHHHHHhchh--------------------------------hhhHHH
Q psy11784 149 Q-GAVPDI----ITVGKPMG-NGMPIGAVIT-SRKIAESLNC--------------------------------LDDNRP 189 (284)
Q Consensus 149 ~-g~~pDi----v~~sK~l~-~G~p~gav~~-~~~i~~~~~~--------------------------------l~~~~~ 189 (284)
. ...||- ..+||-+| .|+++|++.. ++++..+... ..+++.
T Consensus 287 ~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~ 366 (471)
T KOG0256|consen 287 DPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQTQYLLASLLSDEEFTREYLRENNKRLRI 366 (471)
T ss_pred ccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHHHHHHHHHhchHHHHHHHHHHHHHHHHH
Confidence 1 125663 37899999 5899999998 5666655443 226777
Q ss_pred HHHHHHHHHHhc--------cCceeEEEEe----c-ccHHHHHHHHHHHHC-CcEEeecCC----CCCEEEEEcCCCCCH
Q psy11784 190 SGKYLVRPLGIN--------LHIFWCLILL----S-ITYYLYRYTRRMKEA-KIIVANEGE----YGNVLLFLPAMCLTT 251 (284)
Q Consensus 190 ~~~~l~~~L~~~--------~G~~~~i~~~----~-~~~~~~~~~~~l~~~-Gv~~~~~~~----~~~~lr~~p~l~~t~ 251 (284)
+-+++.++|+++ .|+++++++. + ..+.-..+++.+.++ ++.+.|+.. ..+++|+..+ +..+
T Consensus 367 rh~~~~~gLk~lgI~cl~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFA-n~~~ 445 (471)
T KOG0256|consen 367 RHRYIVEGLKALGIPCLKSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFA-NMSE 445 (471)
T ss_pred HHHHHHhhHHhcCCceeecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEec-cCCH
Confidence 888888999887 8999999986 1 122334677777777 999998754 4579998643 5566
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTS 267 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~ 267 (284)
+.++-+++|+..++..
T Consensus 446 ~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256|consen 446 ETLEVAMRRLKQFLDS 461 (471)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6677799999998873
No 241
>PRK07908 hypothetical protein; Provisional
Probab=99.22 E-value=7.3e-10 Score=101.12 Aligned_cols=162 Identities=14% Similarity=0.183 Sum_probs=109.0
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE---Eeccccc-CC
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII---TVGKPMG-NG 165 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv---~~sK~l~-~G 165 (284)
++.++++-..++..|...+ .++|.++|++ +.++|+||+|..| ..|. .......+ .++++ +|||.++ .|
T Consensus 139 ~~~~i~l~np~NPTG~~~~----~~~l~~l~~~-~~~iIvDe~y~~~-~~~~-~~~l~~~~-~~~~i~i~S~SK~~~l~G 210 (349)
T PRK07908 139 DADLVVIGNPTNPTSVLHP----AEQLLALRRP-GRILVVDEAFADA-VPGE-PESLAGDD-LPGVLVLRSLTKTWSLAG 210 (349)
T ss_pred CCCEEEEcCCCCCCCCCcC----HHHHHHHHhc-CCEEEEECcchhh-ccCC-cccccccc-CCCEEEEeecccccCCcc
Confidence 4556666333566787665 4467778864 7889899999866 2232 11211111 23433 6799998 89
Q ss_pred cceeEEEecHHHHHhchh------------------------------hhhHHHHHHHHHHHHHhc--------cCceeE
Q psy11784 166 MPIGAVITSRKIAESLNC------------------------------LDDNRPSGKYLVRPLGIN--------LHIFWC 207 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~~------------------------------l~~~~~~~~~l~~~L~~~--------~G~~~~ 207 (284)
+++|++++++++++.+.. .++++++.+++.+.|++. .|.+++
T Consensus 211 lRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~p~~g~~~~ 290 (349)
T PRK07908 211 LRVGYALGAPDVLARLTRGRAHWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAVGARVVDPAAAPFVL 290 (349)
T ss_pred ceeeeeecCHHHHHHHHhcCCCCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhCCcEeccCCCceEEE
Confidence 999999999988877653 113445555666666653 345556
Q ss_pred EEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 208 LILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 208 i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+.+ +. ...+.+.|.++||.+.++..+ .+++|++. .++++++++++.|++++.
T Consensus 291 ~~~-~~---~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~---~~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 291 VRV-PD---AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV---RPRAEVPVLVQALAEILK 346 (349)
T ss_pred EEC-Cc---HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe---CCCccHHHHHHHHHHHHh
Confidence 655 22 467888888999999987543 47899975 478899999999987754
No 242
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.21 E-value=1.2e-09 Score=99.92 Aligned_cols=172 Identities=16% Similarity=0.115 Sum_probs=112.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccc-cccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFW-AFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~-a~~~~g~~pDi 155 (284)
.+.+++.+.. .++.+|++-.-+...|... +.+.+++|.++| ++++|+||+|..|.. .. +. ....++-.--+
T Consensus 142 ~~~l~~~~~~--~~~~~v~l~~p~NPtG~~~-~~~~~~~i~~~~---~~~ii~De~y~~~~~-~~-~~~~~~~~~~vi~~ 213 (356)
T PRK04870 142 LPAMLAAIAE--HRPALVFLAYPNNPTGNLF-DDADVERIIEAA---PGLVVVDEAYQPFAG-DS-WLPRLARFPNLLVM 213 (356)
T ss_pred HHHHHHHhhc--CCCCEEEEcCCCCCCCCCC-CHHHHHHHHHHC---CCEEEEECCchhhcC-cc-hHHHHhhCCCEEEE
Confidence 5677777752 2455565543356667654 677777777777 789999999987742 11 11 11111111112
Q ss_pred EEeccccc-CCcceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 156 ITVGKPMG-NGMPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 156 v~~sK~l~-~G~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
-+||| ++ .|+++|++++++++++.+.. +++++++.+++.+.|+++
T Consensus 214 ~S~SK-~~~~GlRiG~~i~~~~~i~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~ 292 (356)
T PRK04870 214 RTVSK-LGLAGLRLGYLAGHPAWIAELDKVRPPYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTV 292 (356)
T ss_pred ecchh-hhhHHHhhhhhhCCHHHHHHHHHccCCCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 36899 55 48999999999988877643 224445566666666654
Q ss_pred ---cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCCC----CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 ---LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGEY----GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 ---~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~----~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|.++++.+ + ...++++.|.++||.+.++..+ .+.+|++.. +.++.+.++++|+++
T Consensus 293 ~~~~~~~~~~~~-~---~~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 293 FPSAANFILVRV-P---DAAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTVG---TPEENAQFLAALKAA 355 (356)
T ss_pred CCCCCeEEEEEC-C---CHHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeCC---CHHHHHHHHHHHHHh
Confidence 344555554 2 3467888999999999986433 468999644 789999999998765
No 243
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.21 E-value=3.9e-09 Score=99.80 Aligned_cols=178 Identities=13% Similarity=0.104 Sum_probs=112.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.++++++++.....+ |++ ..+..|...+ +++|.++|+++|+++++|++|+ +|..+...+... .. ..|++
T Consensus 171 ~~~L~~~l~~~~~~l--vi~--~~s~~g~~~d----i~~I~~i~~~~ga~l~vDaaq~-~G~i~~~~~~~~-~~-~~D~l 239 (452)
T PTZ00094 171 YDKLEELAKAFRPKL--IIA--GASAYPRDID----YKRFREICDSVGAYLMADIAHT-SGLVAAGVLPSP-FP-YADVV 239 (452)
T ss_pred HHHHHHHHHHhCCCE--EEE--eCCCCCCccC----HHHHHHHHHHcCCEEEEeccch-hccccCCCCCCC-CC-CCcEE
Confidence 678888886433333 333 1234566666 9999999999999999999997 544432111111 11 47888
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhc----hh---------------------------------hhhHHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESL----NC---------------------------------LDDNRPSGKYLVRP 197 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~----~~---------------------------------l~~~~~~~~~l~~~ 197 (284)
+++ |++.|.. .|++++++++.+.+ .. .+++.++.++|.+.
T Consensus 240 ~~S~hK~l~GP~-Gg~l~~~~~~~~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~ 318 (452)
T PTZ00094 240 TTTTHKSLRGPR-SGLIFYRKKVKPDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAA 318 (452)
T ss_pred EcCCccCCCCCC-ceEEEEecccchHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHH
Confidence 765 9997633 26666665442211 00 22566777788888
Q ss_pred HHhccCcee----------EEEEecccHHHHHHHHHHHHCCcEEeec-CC------CCCEEEEEcCCCCC----HHHHHH
Q psy11784 198 LGINLHIFW----------CLILLSITYYLYRYTRRMKEAKIIVANE-GE------YGNVLLFLPAMCLT----TENVLF 256 (284)
Q Consensus 198 L~~~~G~~~----------~i~~~~~~~~~~~~~~~l~~~Gv~~~~~-~~------~~~~lr~~p~l~~t----~~~id~ 256 (284)
|++. |+-+ .+.+.........+...|.++||++... .+ ..+.+|+.|+...| ++|+++
T Consensus 319 L~~~-g~~v~~~~~~~~~~~v~~~~~~~~~~~~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~~ 397 (452)
T PTZ00094 319 LEKR-GYDLVTGGTDNHLVLVDLRPFGITGSKMEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFKF 397 (452)
T ss_pred HHhC-CcEEecCCCCCceEeecCCcCCCCHHHHHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHHH
Confidence 8663 3211 1122111224556777777789999521 11 23689999977765 999999
Q ss_pred HHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTS 267 (284)
Q Consensus 257 ~~~~l~~~l~~ 267 (284)
+++.|.+++..
T Consensus 398 l~~~l~~~~~~ 408 (452)
T PTZ00094 398 VADFLDRAVKL 408 (452)
T ss_pred HHHHHHHHHHH
Confidence 99999999875
No 244
>PLN02672 methionine S-methyltransferase
Probab=99.19 E-value=2.9e-09 Score=108.23 Aligned_cols=186 Identities=12% Similarity=0.109 Sum_probs=121.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcc--cccc----cc-
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHF--WAFQ----TQ- 149 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~--~a~~----~~- 149 (284)
.+.+++.+... ...+.++.-|-++-.|. .++++.+++|.++|++||+++|.||+|.++-..+... +... .+
T Consensus 817 ~d~Le~al~~~-~~~~I~L~nPnhNPTG~-v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~ 894 (1082)
T PLN02672 817 AKTLASTLETV-KKPWVYISGPTINPTGL-LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLK 894 (1082)
T ss_pred HHHHHHHhccC-CCCEEEEECcCCCCcCc-cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhc
Confidence 46677777521 12356778886566675 5699999999999999999999999998764444311 1110 11
Q ss_pred CCCC--cEE---Eeccccc-CCcceeEEEec-HHHHHhchh------------------h------------------hh
Q psy11784 150 GAVP--DII---TVGKPMG-NGMPIGAVITS-RKIAESLNC------------------L------------------DD 186 (284)
Q Consensus 150 g~~p--Div---~~sK~l~-~G~p~gav~~~-~~i~~~~~~------------------l------------------~~ 186 (284)
...+ .++ +|||.++ .|+++|+++++ +++++.+.. + +.
T Consensus 895 ~~sks~nVIvL~SfSKkf~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~ 974 (1082)
T PLN02672 895 SSNPSFAVALLGGLSTELLSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKI 974 (1082)
T ss_pred cccCCceEEEEeCcHHhhccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHH
Confidence 1112 222 6788887 58999999996 446665532 1 01
Q ss_pred HHHHHHHHHHHHHhc--------cCceeEEEEec---------c-------cHHHHHHHHHHHHC-CcEEeecCCC--CC
Q psy11784 187 NRPSGKYLVRPLGIN--------LHIFWCLILLS---------I-------TYYLYRYTRRMKEA-KIIVANEGEY--GN 239 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~--------~G~~~~i~~~~---------~-------~~~~~~~~~~l~~~-Gv~~~~~~~~--~~ 239 (284)
++++.+++.+.|++. .|+++++.+.. . ......+++.|+++ ||.+.|+..+ .+
T Consensus 975 Lk~rRd~L~e~L~~~Gi~v~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g 1054 (1082)
T PLN02672 975 LKSRAERLKETLEACGWDVLEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPG 1054 (1082)
T ss_pred HHHHHHHHHHHHHHCCCeEecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCC
Confidence 334445555555543 34555554310 0 12457899999875 9999987543 36
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 240 VLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 240 ~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++|++. ..+++++++++++|.++.+
T Consensus 1055 ~~RIsf--a~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1055 YCRFSF--ALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred eEEEEe--cCCHHHHHHHHHHHHHHHH
Confidence 899964 5588999999999988654
No 245
>PRK14012 cysteine desulfurase; Provisional
Probab=99.18 E-value=1.8e-09 Score=100.55 Aligned_cols=175 Identities=15% Similarity=0.117 Sum_probs=112.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++..+.+..|.+.+ +++|.++|++||+++|+|++|+ +|..- .......+|++
T Consensus 134 ~~~l~~~i~---~~t~lv~~~~~~n~tG~~~~----~~~I~~la~~~g~~vivD~a~~-~g~~~-----~~~~~~~~D~~ 200 (404)
T PRK14012 134 LEKLEAAMR---DDTILVSIMHVNNEIGVIQD----IAAIGEICRERGIIFHVDAAQS-VGKVP-----IDLSKLKVDLM 200 (404)
T ss_pred HHHHHHhcC---CCCEEEEEECcCCCccchhh----HHHHHHHHHHcCCEEEEEcchh-cCCcc-----cCcccCCCCEE
Confidence 567777775 45678889988888898887 8999999999999999999997 33221 11123458998
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhc-------------hh-------------------------hhhHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESL-------------NC-------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~-------------~~-------------------------l~~~~~~~~~l~~ 196 (284)
++| |.++. ..+|+++++++....+ .. .++.+++.+++.+
T Consensus 201 ~~s~~K~~gp-~g~G~l~~~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~ 279 (404)
T PRK14012 201 SFSAHKIYGP-KGIGALYVRRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIAKEEMATENERIRALRDRLWN 279 (404)
T ss_pred EEehhhccCC-CceEEEEEecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 887 96653 2578877765422111 00 1244556666667
Q ss_pred HHHhccCc------------eeEEEEecccHHHHHHHHHHHHCCcEEeecC---------------------CCCCEEEE
Q psy11784 197 PLGINLHI------------FWCLILLSITYYLYRYTRRMKEAKIIVANEG---------------------EYGNVLLF 243 (284)
Q Consensus 197 ~L~~~~G~------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~---------------------~~~~~lr~ 243 (284)
.|+++.+. .+.+.+... ....+...|. ++.+..+. ...+.+|+
T Consensus 280 ~L~~~~~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRl 355 (404)
T PRK14012 280 GIKDIEEVYLNGDLEQRVPGNLNVSFNYV--EGESLIMALK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRF 355 (404)
T ss_pred HHhcCCCEEEeCCccccCCCEEEEEEeCc--CHHHHHHhCC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEE
Confidence 66653111 001111100 1234555554 43332210 01368999
Q ss_pred EcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 244 LPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 244 ~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.++...|++|+|++++.|+++++.+.
T Consensus 356 s~~~~~t~~dvd~~~~~l~~~~~~~~ 381 (404)
T PRK14012 356 SLGRFTTEEEIDYAIELVRKSIGKLR 381 (404)
T ss_pred EecCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999988763
No 246
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.15 E-value=9e-09 Score=98.02 Aligned_cols=183 Identities=16% Similarity=0.157 Sum_probs=116.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++|++.+. +++++|++.- .+..|.. ..-+++|.++|+++|+++++|.++. .+-.|. .....+| .|++
T Consensus 198 ~e~L~~~i~---~~t~~V~v~~-Pn~tG~~---~~dl~eI~~~a~~~gal~iVD~a~~-~~~~g~--~~~~~~G--aD~~ 265 (481)
T PRK04366 198 LEALKAAVG---EDTAALMLTN-PNTLGLF---ERNILEIAEIVHEAGGLLYYDGANL-NAILGK--ARPGDMG--FDVV 265 (481)
T ss_pred HHHHHhhcc---cCCeEEEEeC-CCCcccc---chHHHHHHHHHHHcCCEEEEEecCh-hhhccc--CCccccC--CCEE
Confidence 567777664 4566666643 2345643 2248999999999999999999985 222232 1112233 5887
Q ss_pred Ee--cccccC-----CcceeEEEecHHHHHhchh----------------------------------------------
Q psy11784 157 TV--GKPMGN-----GMPIGAVITSRKIAESLNC---------------------------------------------- 183 (284)
Q Consensus 157 ~~--sK~l~~-----G~p~gav~~~~~i~~~~~~---------------------------------------------- 183 (284)
++ -|.+++ |--+|++.+++++.+.+..
T Consensus 266 ~~~~hK~l~~P~g~Ggp~~G~l~~~~~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~ 345 (481)
T PRK04366 266 HLNLHKTFSTPHGGGGPGSGPVGVKEELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAE 345 (481)
T ss_pred EEechhhcCCCCCCCCCCeeeeeehhhhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHH
Confidence 65 388862 2235666666655544310
Q ss_pred -h----hhHHHHHHHHHHHHHhccCce------eEEEEe-c----ccHHHHHHHHHHHHCCcEEeecCC---CCCEEEEE
Q psy11784 184 -L----DDNRPSGKYLVRPLGINLHIF------WCLILL-S----ITYYLYRYTRRMKEAKIIVANEGE---YGNVLLFL 244 (284)
Q Consensus 184 -l----~~~~~~~~~l~~~L~~~~G~~------~~i~~~-~----~~~~~~~~~~~l~~~Gv~~~~~~~---~~~~lr~~ 244 (284)
+ ++...+.++++++|+++.... .-+-+. + ......++.++|.++|+.+..... ..+.+|++
T Consensus 346 Gl~~~a~~~~~~a~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~~~Gi~~~~~~~p~~~~~~l~is 425 (481)
T PRK04366 346 GLREVSEDAVLNANYLKARLKDIYDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLLDYGFHPPTIYFPLIVPEALMIE 425 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhCcccCCCCeeEEEEEECccccccCCCHHHHHHHHHHCCccCCccccccccCCeEEEc
Confidence 1 134455778888888741111 111111 0 012567899999999998762211 24689999
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 245 PAMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 245 p~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
|....|++|||.+++.|.++.+++.++
T Consensus 426 ~~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 426 PTETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred ccCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999887643
No 247
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.15 E-value=3e-09 Score=97.81 Aligned_cols=171 Identities=12% Similarity=0.121 Sum_probs=110.5
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.+. +++.+++ +..-.+..|...+ +++|.++|++||+++|+|++|+ . . ......+| .|+
T Consensus 138 ~~~le~ai~---~~t~ai~~v~~~~~~~g~~~~----~~~i~~~a~~~gi~vivD~a~~-~--~---~~~~~~~g--~D~ 202 (363)
T TIGR01437 138 AEQLEAAIT---EKTAAILYIKSHHCVQKSMLS----VEDAAQVAQEHNLPLIVDAAAE-E--D---LQKYYRLG--ADL 202 (363)
T ss_pred HHHHHHhcC---hhceEEEEEecCCCCcCCcCC----HHHHHHHHHHcCCeEEEECCCC-C--c---hHHHHHcC--CCE
Confidence 567787775 3444554 4443334555555 8899999999999999999996 2 1 11111123 588
Q ss_pred EEec--ccccCCcceeEEEecHHHHHhchh---------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 156 ITVG--KPMGNGMPIGAVITSRKIAESLNC---------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 156 v~~s--K~l~~G~p~gav~~~~~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+++| |.++|. ..|+++++++.++.+.. ++...++.+++.++|.+
T Consensus 203 ~~~S~~K~l~gp-~~G~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~~~~~~~~~~~~~~~~l~~~L~~ 281 (363)
T TIGR01437 203 VIYSGAKAIEGP-TSGLVLGKKKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLSTGKESGAEMVAKLTPFIEALNT 281 (363)
T ss_pred EEEeCCcccCCC-ceEEEEEcHHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHccCcccHHHHHHHHHHHHHHHhc
Confidence 7765 988643 58888888877665311 12333445567777776
Q ss_pred ccCce--------------eEEEEec--ccHHHHHHHHHHHHCC--cEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 201 NLHIF--------------WCLILLS--ITYYLYRYTRRMKEAK--IIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 201 ~~G~~--------------~~i~~~~--~~~~~~~~~~~l~~~G--v~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+.|+- ..+.+.. ......++.+.|.++| |++++.....+.+++.|+. .+++|++.++++|.
T Consensus 282 i~g~~~~~~~~~~~~~~~~~~v~~~~~~~g~~~~~l~~~L~~~~~~I~~r~~~~~~~~~~l~~~~-~~~~e~~~~~~~l~ 360 (363)
T TIGR01437 282 LKGVSASIVQDEAGRDIARAEIRFDESELGMTAADVVQALRQGEPAIYTRGYKANEGIIEIDPRS-VTGGQLDIIVERIR 360 (363)
T ss_pred CCCeEEEEecCCCCCcCceEEEEEeccCCCCCHHHHHHHHhcCCCCEEEeeeeecCCeEEEEeec-CCHHHHHHHHHHHH
Confidence 52321 1222221 1235678999998877 7776533345688999885 67999999999998
Q ss_pred HH
Q psy11784 263 RI 264 (284)
Q Consensus 263 ~~ 264 (284)
++
T Consensus 361 ~~ 362 (363)
T TIGR01437 361 EI 362 (363)
T ss_pred Hh
Confidence 75
No 248
>PLN02651 cysteine desulfurase
Probab=99.14 E-value=1.9e-09 Score=98.94 Aligned_cols=161 Identities=15% Similarity=0.073 Sum_probs=105.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++..|++..+.+..|.+.+ +++|.++|++||+++++|.+|+ +|.. .+-.+ ...+|++
T Consensus 128 ~~~l~~~i~---~~t~lv~v~~~~n~tG~~~~----l~~I~~~~~~~g~~~~vD~a~~-~g~~---~~~~~--~~~~D~~ 194 (364)
T PLN02651 128 LDELAAAIR---PDTALVSVMAVNNEIGVIQP----VEEIGELCREKKVLFHTDAAQA-VGKI---PVDVD--DLGVDLM 194 (364)
T ss_pred HHHHHHhcC---CCcEEEEEECCCCCceeccc----HHHHHHHHHHcCCEEEEEcchh-hCCc---ccCcc--cCCCCEE
Confidence 567777775 45788889888888898888 9999999999999999999997 3321 12222 3446998
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhchh--------------------------------------hhhHHHHHHHHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLNC--------------------------------------LDDNRPSGKYLVR 196 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~~--------------------------------------l~~~~~~~~~l~~ 196 (284)
++| | ++|...+|+++.+++..+.+.. .++.+++.+++.+
T Consensus 195 ~~s~hK-~~gp~G~g~l~v~~~~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~ 273 (364)
T PLN02651 195 SISGHK-IYGPKGVGALYVRRRPRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLN 273 (364)
T ss_pred Eechhh-hCCCCceEEEEEcCCCCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 775 8 4443568888888765443221 1245556667777
Q ss_pred HHHh-ccCc--------------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCE
Q psy11784 197 PLGI-NLHI--------------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNV 240 (284)
Q Consensus 197 ~L~~-~~G~--------------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~ 240 (284)
.|++ +.|+ ++.+.+ + ......+.+.|.+ |.++.+.. ..+.
T Consensus 274 ~l~~~~~~~~i~~~~~~~~~~~~i~~~~~-~-~~~~~~~~~~L~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~ 349 (364)
T PLN02651 274 GLRAKLGGVRVNGPRDPEKRYPGTLNLSF-A-YVEGESLLMGLKE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGS 349 (364)
T ss_pred HHHhhCCCEEEECCCCcccCcCCEEEEEe-C-CCCHHHHHHHhCC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCce
Confidence 6654 2111 222222 1 2235577777754 66653320 1368
Q ss_pred EEEEcCCCCCHHHHH
Q psy11784 241 LLFLPAMCLTTENVL 255 (284)
Q Consensus 241 lr~~p~l~~t~~~id 255 (284)
+|++++...|++|||
T Consensus 350 vR~S~~~~~t~~did 364 (364)
T PLN02651 350 LRLGVGRFTTEEEVD 364 (364)
T ss_pred EEEEcCCCCCHHHcC
Confidence 999999999999985
No 249
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.14 E-value=5.5e-09 Score=98.82 Aligned_cols=192 Identities=13% Similarity=0.076 Sum_probs=120.7
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc----Cccc---cCcccccc-
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG----MGRS---GSHFWAFQ- 147 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG----~gr~---G~~~~a~~- 147 (284)
.+.|++.+..++ +++++|+++...+..|..+.+.+.+++|+++|++||++||.|+++.. |... |.......
T Consensus 163 ~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~ 242 (460)
T PRK13238 163 LEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKE 242 (460)
T ss_pred HHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHH
Confidence 688888887443 45999999977777666788899999999999999999999997742 1110 10000000
Q ss_pred ---ccCCCCcEEEec-ccccCCcceeEEE-ec-HHHHHhchh----------------------------------hhhH
Q psy11784 148 ---TQGAVPDIITVG-KPMGNGMPIGAVI-TS-RKIAESLNC----------------------------------LDDN 187 (284)
Q Consensus 148 ---~~g~~pDiv~~s-K~l~~G~p~gav~-~~-~~i~~~~~~----------------------------------l~~~ 187 (284)
..+--.|+.++| |-.+. .|.|+++ ++ +++++.+.. ++..
T Consensus 243 i~~~~~s~~D~~~~Sg~K~g~-~~~GG~i~~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~ 321 (460)
T PRK13238 243 IAREMFSYADGLTMSAKKDAM-VNIGGLLCFRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR 321 (460)
T ss_pred HhhhhcccCcEEEEecccCCC-CcceeEEEcChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH
Confidence 001126777665 11111 2444444 45 466655432 1122
Q ss_pred HHHHHHHHHHHHhc--------cCceeEEEEec---c----cHHHHHHHHHHH-HCCcEEeecCC---------C-----
Q psy11784 188 RPSGKYLVRPLGIN--------LHIFWCLILLS---I----TYYLYRYTRRMK-EAKIIVANEGE---------Y----- 237 (284)
Q Consensus 188 ~~~~~~l~~~L~~~--------~G~~~~i~~~~---~----~~~~~~~~~~l~-~~Gv~~~~~~~---------~----- 237 (284)
.++.++|.+.|++. .|+++.+++.. . ......++..|+ +.||.+.+++. +
T Consensus 322 ~~~~~~l~~~L~~~G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~ 401 (460)
T PRK13238 322 IGQVEYLGEGLEEAGVPIQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPA 401 (460)
T ss_pred HHHHHHHHHHHHHCCCCeEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCC
Confidence 22457777777765 44555555531 0 112466777777 67999987542 1
Q ss_pred -CCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHh
Q psy11784 238 -GNVLLFLPAM-CLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 238 -~~~lr~~p~l-~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.+||..|- ..|++++|.+.++|..+.+.-.
T Consensus 402 ~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~~~ 435 (460)
T PRK13238 402 PAELLRLAIPRRVYTQSHMDYVAEALKAVKENRE 435 (460)
T ss_pred ccceEEEecccccCCHHHHHHHHHHHHHHHHhHh
Confidence 3689998775 4599999999999998875543
No 250
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.14 E-value=7.4e-09 Score=92.22 Aligned_cols=237 Identities=16% Similarity=0.187 Sum_probs=139.6
Q ss_pred HHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccc-----------cCCCC---CceEEccCCCCcCCCCCCCchH
Q psy11784 6 LALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFML-----------SSEKK---PWVHVIPFPDTYRGEFSADDPQ 71 (284)
Q Consensus 6 ~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~-----------~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 71 (284)
.+-..++...||..++.+.+|=.++.....+...+.... ..+-+ ...+..|..+...+..
T Consensus 39 ~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gkl------ 112 (342)
T COG2008 39 ALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKL------ 112 (342)
T ss_pred HHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCc------
Confidence 333344444588888888888888877766544221000 01111 1111111111111111
Q ss_pred HHHHHHHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc
Q psy11784 72 AAQKYAQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT 148 (284)
Q Consensus 72 ~~~~~~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~ 148 (284)
..++++..+.. +......+++|.-..++|. ++|.+.|++|.++||+||+.|.+| |- |... +.-.
T Consensus 113 ----t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmD----GA-R~~n---A~va 179 (342)
T COG2008 113 ----TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT-VYPLDELEAISAVCKEHGLPLHMD----GA-RLAN---ALVA 179 (342)
T ss_pred ----CHHHHHHhhcCCCcccCCCceEEEeeccCCCce-ecCHHHHHHHHHHHHHhCCceeec----hH-HHHH---HHHH
Confidence 15777777763 2334778888887776665 679999999999999999999999 43 3321 2222
Q ss_pred cC-------CCCcEEEecccccCCcceeEEEe-cHHHHHhchh-------------------------------hhhHHH
Q psy11784 149 QG-------AVPDIITVGKPMGNGMPIGAVIT-SRKIAESLNC-------------------------------LDDNRP 189 (284)
Q Consensus 149 ~g-------~~pDiv~~sK~l~~G~p~gav~~-~~~i~~~~~~-------------------------------l~~~~~ 189 (284)
+| ---|+++++-.=++|.|.++++. +++.++.+.. -++..+
T Consensus 180 lg~~~~~~~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~ 259 (342)
T COG2008 180 LGVALKTIKSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANA 259 (342)
T ss_pred cCCCHHHHHhhCCEEEEecccCCcceeeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHH
Confidence 22 12466654433334567777775 7777766543 125556
Q ss_pred HHHHHHHHHHhccCceeE---------EEEeccc-HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 190 SGKYLVRPLGINLHIFWC---------LILLSIT-YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 190 ~~~~l~~~L~~~~G~~~~---------i~~~~~~-~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
+.++|.+.++...|.-+. +.+ +.. .........+...|++..+. +..+||..+..+|++++++++.
T Consensus 260 mA~~La~~~~~~~G~~~~~~~~tN~vf~~l-~~~~i~~l~~~~~~~~~~~~~~~~---~~~vRfvts~a~~~edv~~~~~ 335 (342)
T COG2008 260 MAARLAEGLEAKPGVKLAFPVETNMVFVRL-PESAIEALRLAGALFYRGVLIGAH---GEIVRFVTSWATSEEDVDELVA 335 (342)
T ss_pred HHHHHHHhhhhcCCceeccCCcccEEEEEC-ChHHHHHHHhhchhheeeeeccCC---CceEEEEeeccCCHHHHHHHHH
Confidence 688888888854343222 222 211 22333444455666666532 2579999999999999999999
Q ss_pred HHHHHH
Q psy11784 260 TLNRIF 265 (284)
Q Consensus 260 ~l~~~l 265 (284)
.+++++
T Consensus 336 ~~~~~~ 341 (342)
T COG2008 336 AIKALL 341 (342)
T ss_pred HHHHhh
Confidence 887764
No 251
>PRK08637 hypothetical protein; Provisional
Probab=99.12 E-value=7e-09 Score=96.12 Aligned_cols=186 Identities=15% Similarity=0.090 Sum_probs=116.0
Q ss_pred HHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH-----hCCEEEEecccccCccccCcccc-cc-c
Q psy11784 77 AQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE-----IGGVVIADEIQCGMGRSGSHFWA-FQ-T 148 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~-----~g~llI~DEv~tG~gr~G~~~~a-~~-~ 148 (284)
++++++.++.. .+....+++-.-++-.|. ..+++.+++|.++|++ |++++|.||+|..|-..++..-. .. .
T Consensus 132 ~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~-~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~ 210 (388)
T PRK08637 132 TDALKEALQAAYNKGKVIVILNFPNNPTGY-TPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAAL 210 (388)
T ss_pred HHHHHHHHHhhccCCCEEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHh
Confidence 66777776521 222333433323555664 6799999999999886 99999999999887444421101 11 1
Q ss_pred cCCCCcE--E---Eeccccc-CCcceeEEEec------HHHHHhch------------h------------h------h-
Q psy11784 149 QGAVPDI--I---TVGKPMG-NGMPIGAVITS------RKIAESLN------------C------------L------D- 185 (284)
Q Consensus 149 ~g~~pDi--v---~~sK~l~-~G~p~gav~~~------~~i~~~~~------------~------------l------~- 185 (284)
.+..+.+ + ++||.++ .|+++|+++.. +++++.+. . + +
T Consensus 211 ~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~ 290 (388)
T PRK08637 211 ANLHSNILAVKLDGATKEEFVWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKE 290 (388)
T ss_pred hcccccceEEEeccccccCCCcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHH
Confidence 1222332 2 5899866 58999999854 45444331 0 1 1
Q ss_pred ------hHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcC
Q psy11784 186 ------DNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPA 246 (284)
Q Consensus 186 ------~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~ 246 (284)
.++++.+.+.+.|++. .|+++++.+. .....++++.|+ ++||.+.+. ..+.+|+...
T Consensus 291 ~~~~~~~~~~r~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~l~--~~~~~~l~~~l~~~~gv~~~~~--~~~~iRi~~~ 366 (388)
T PRK08637 291 KQEKFQILKERYEKTKEVLYDGKYDDAWQAYPFNSGYFMCLKLK--GVDAEELRVHLLEKYGIGTIAL--NETDLRIAFS 366 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCCCCcccccccceEEEEecCC--hHHHHHHHHHHhhhcceEEEec--cCCceEEEee
Confidence 2333333444444321 3556666662 234678889886 679988753 3568999765
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~ 268 (284)
. .+++++++++++|.++++.+
T Consensus 367 ~-~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 367 C-VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred c-CCHHHHHHHHHHHHHHHHhc
Confidence 4 68999999999999988754
No 252
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.12 E-value=2.4e-09 Score=97.38 Aligned_cols=157 Identities=15% Similarity=0.121 Sum_probs=102.4
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccc-ccccCCCCcEEEeccccc-CCccee
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWA-FQTQGAVPDIITVGKPMG-NGMPIG 169 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a-~~~~g~~pDiv~~sK~l~-~G~p~g 169 (284)
.++++-.-++-.|... +++.+++| + ++++++|.||+|..|. +..... ...+.-.--+-+|||.++ .|+++|
T Consensus 140 ~~i~i~nP~NPTG~~~-s~~~l~~l---~-~~~~~ii~DE~Y~~f~--~~~~~~~~~~~~~vi~~~S~SK~~~l~GlRvG 212 (335)
T PRK14808 140 DVVFIPNPNNPTGHVF-EREEIERI---L-KTGAFVALDEAYYEFH--GESYVDLLKKYENLAVIRTFSKAFSLAAQRIG 212 (335)
T ss_pred CEEEEeCCCCCCCCCc-CHHHHHHH---H-hcCCEEEEECchhhhc--CCchHHHHHhCCCEEEEEechhhccCcccceE
Confidence 4454433344466655 55555444 4 5899999999998873 221111 111111112337899999 799999
Q ss_pred EEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc-------cCceeEEEEeccc
Q psy11784 170 AVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------LHIFWCLILLSIT 214 (284)
Q Consensus 170 av~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------~G~~~~i~~~~~~ 214 (284)
++++++++++.+.. .+.+.+..+++.+.|++. .|.++++.+. .
T Consensus 213 ~~v~~~~~~~~l~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~~~~g~f~~~~l~-~- 290 (335)
T PRK14808 213 YVVSSEKFIDAYNRVRLPFNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMGYRITDSRGNFVFIFME-K- 290 (335)
T ss_pred EEEeCHHHHHHHHHhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCeEEEEeCC-C-
Confidence 99999999887654 113334455566666653 4556666663 2
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
....++.+.|.++||+++. +.+.+|++ .-+.++.+++++.|++
T Consensus 291 ~~~~~~~~~l~~~Gi~V~~---~~~~~Ris---i~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 291 EEKERLLEHLRAKNIAVRS---FREGVRIT---IGKREENDMILKELEV 333 (335)
T ss_pred ccHHHHHHHHHHCCeEEEE---CCCCeEEe---cCCHHHHHHHHHHHHh
Confidence 2346788999999999985 34689996 4578899999988864
No 253
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.12 E-value=9.8e-09 Score=97.41 Aligned_cols=177 Identities=12% Similarity=0.089 Sum_probs=113.6
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.++|++++.+.... .||+ |++.++.++ +++|+++|++||++|++|++|. +|-.+..... ..++ ..|+
T Consensus 172 ~d~Le~~l~~~~pk--lIv~~~S~~s~~~D-------~a~i~~ia~~~ga~LlvD~AH~-~Gli~~~~~~-~p~~-~~Di 239 (475)
T PLN03226 172 YDKLEKKAMLFRPK--LIIAGASAYPRDWD-------YARMRKIADKVGALLMCDMAHI-SGLVAAQEAA-SPFE-YCDV 239 (475)
T ss_pred HHHHHHHHhhcCCe--EEEEecCcCCCccC-------HHHHHHHHHHcCCEEEEEchhh-hCcccCCCCC-CCCC-CCeE
Confidence 67888888644333 3444 766655433 7799999999999999999997 4333321111 1122 4787
Q ss_pred E--EecccccCCcceeEEEecHHHH-----------Hh---chh---------------------------------hhh
Q psy11784 156 I--TVGKPMGNGMPIGAVITSRKIA-----------ES---LNC---------------------------------LDD 186 (284)
Q Consensus 156 v--~~sK~l~~G~p~gav~~~~~i~-----------~~---~~~---------------------------------l~~ 186 (284)
+ |++|+|.|-. -|++++++++. +. +.. .++
T Consensus 240 v~~t~hK~L~GP~-Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~ 318 (475)
T PLN03226 240 VTTTTHKSLRGPR-GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQ 318 (475)
T ss_pred EEecCcccccCCC-ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHH
Confidence 7 4569996521 26666666432 11 111 236
Q ss_pred HHHHHHHHHHHHHhccCc----------eeEEEEecccHHHHHHHHHHHHCCcEEeecC-------CCCCEEEE----Ec
Q psy11784 187 NRPSGKYLVRPLGINLHI----------FWCLILLSITYYLYRYTRRMKEAKIIVANEG-------EYGNVLLF----LP 245 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~~G~----------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~lr~----~p 245 (284)
+.++.++|.+.|++. |+ +..+++.+......++.+.|.+.||++.... .....+|+ ..
T Consensus 319 ~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~gi~~~~~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt 397 (475)
T PLN03226 319 VKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLGLTGSRVEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMT 397 (475)
T ss_pred HHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCCCCHHHHHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHH
Confidence 677888888888774 32 3334443333345667788889999987431 12356887 45
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q psy11784 246 AMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l~~ 267 (284)
...++++|++++.+.|.++++.
T Consensus 398 ~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 398 SRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred HCCCCHHHHHHHHHHHHHHHHH
Confidence 6678999999999999999984
No 254
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.09 E-value=2.6e-09 Score=102.00 Aligned_cols=90 Identities=16% Similarity=0.258 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHH--hCCEEEEecccccCccccCccccccccCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHE--IGGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~--~g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
.+++++++. +++.+|++ .| .+-.|. +.+++.+++|.++|++ +|+++|.||+|..|.. . +.... ...|
T Consensus 231 ~~~l~~~~~---~~tkai~l~nP-~NPTG~-v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~-~~s~~--~~~~ 300 (527)
T PRK09275 231 DSELEKLRD---PSIKALFLVNP-SNPPSV-AMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD--D-FRSLF--AVLP 300 (527)
T ss_pred HHHHHhhcC---CCCCEEEEeCC-cCCcCC-CCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc--c-ccCHH--HhCC
Confidence 456666543 45666664 55 444564 6689999999999965 4999999999987732 2 11111 1123
Q ss_pred c----EEEeccccc-CCcceeEEEecHH
Q psy11784 154 D----IITVGKPMG-NGMPIGAVITSRK 176 (284)
Q Consensus 154 D----iv~~sK~l~-~G~p~gav~~~~~ 176 (284)
+ +.+|||.++ .|+++|+++++++
T Consensus 301 ~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 301 YNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 3 237899998 6999999999876
No 255
>PLN02242 methionine gamma-lyase
Probab=99.08 E-value=1.6e-08 Score=94.68 Aligned_cols=172 Identities=13% Similarity=0.119 Sum_probs=114.3
Q ss_pred HHHHHHHHHhcCC-CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRD-NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~-~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+.+++.++ + .+.+|++|...+..|.+.+ +++|.++|++||+++|+||+|+.+ .... ..+| .|+
T Consensus 152 ~e~l~~~i~---~~~tklV~lesp~NPtG~v~d----l~~I~~la~~~gi~livDea~~~~-~~~~-----~~~g--~di 216 (418)
T PLN02242 152 LEAVKKAVV---PGKTKVLYFESISNPTLTVAD----IPELARIAHEKGVTVVVDNTFAPM-VLSP-----ARLG--ADV 216 (418)
T ss_pred HHHHHHhcC---cCCCEEEEEecCCCCCCcccC----HHHHHHHHHHhCCEEEEECCCCcc-CCCH-----HHcC--CcE
Confidence 566666664 3 4789999988888888776 999999999999999999999744 2211 1223 465
Q ss_pred E--EecccccC-Ccc-eeEEEecHHHHHhchh-------------------------------hhhHHHHHHHHHHHHHh
Q psy11784 156 I--TVGKPMGN-GMP-IGAVITSRKIAESLNC-------------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 156 v--~~sK~l~~-G~p-~gav~~~~~i~~~~~~-------------------------------l~~~~~~~~~l~~~L~~ 200 (284)
+ +++|.+++ |.+ .|++++++++++.+.. +++.+++++++.+.|++
T Consensus 217 vv~S~SK~l~g~g~~~gG~iv~~~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~ 296 (418)
T PLN02242 217 VVHSISKFISGGADIIAGAVCGPAELVNSMMDLHHGALMLLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKE 296 (418)
T ss_pred EEEeCccccCCCCCceEEEEEcCHHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHh
Confidence 5 67899986 566 5888888877665431 34567777888888876
Q ss_pred c---------------------------cCceeEEEEecccHHHHHHHHHHHHC----CcEEeecC--------------
Q psy11784 201 N---------------------------LHIFWCLILLSITYYLYRYTRRMKEA----KIIVANEG-------------- 235 (284)
Q Consensus 201 ~---------------------------~G~~~~i~~~~~~~~~~~~~~~l~~~----Gv~~~~~~-------------- 235 (284)
. .|.|+++++. ..+.+.+|++.+.-- .+.+..++
T Consensus 297 ~~~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~-~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~ 375 (418)
T PLN02242 297 LGLKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD-TEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSS 375 (418)
T ss_pred CCCEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC-CHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccc
Confidence 5 1456777774 345566777776511 11111110
Q ss_pred -----------CCCCEEEEEcCCCCCHH-HHHHHHHHHHHHHHHH
Q psy11784 236 -----------EYGNVLLFLPAMCLTTE-NVLFIVSTLNRIFTSL 268 (284)
Q Consensus 236 -----------~~~~~lr~~p~l~~t~~-~id~~~~~l~~~l~~~ 268 (284)
...+.+|++. .-| +.|.+++-|+++|+.+
T Consensus 376 ~~~~~~~~~~gi~~~liRlsv----GlE~~~~dli~dl~~al~~~ 416 (418)
T PLN02242 376 ELDPEEKAAAGISPGLVRMSV----GYTGTLEQRWSQFEKALSAM 416 (418)
T ss_pred cCCHHHHHhcCCCCCeEEEEe----cCCCCHHHHHHHHHHHHHHh
Confidence 0124677743 335 3788888888888765
No 256
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.07 E-value=2.1e-08 Score=94.05 Aligned_cols=83 Identities=19% Similarity=0.352 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|+..+..|.+.+ +++|.++|++||+++|+||++. .+... .......|++
T Consensus 133 ~e~le~ai~---~~tklV~lesp~NPtG~v~d----l~~I~~la~~~~i~vVvD~a~a-~~~~~------~p~~~gaDiv 198 (425)
T PRK06084 133 IAALEALID---ERTKAVFCESIGNPAGNIID----IQALADAAHRHGVPLIVDNTVA-TPVLC------RPFEHGADIV 198 (425)
T ss_pred HHHHHHHhc---cCCcEEEEeCCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-ccccC------ChhhcCCCEE
Confidence 567777775 35789999999888898777 8999999999999999999996 21111 2223347777
Q ss_pred --EecccccC-CcceeEEEe
Q psy11784 157 --TVGKPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 --~~sK~l~~-G~p~gav~~ 173 (284)
+++|.++| |.++|++++
T Consensus 199 v~S~tK~l~G~g~~~gG~v~ 218 (425)
T PRK06084 199 VHSLTKYIGGHGTSIGGIVV 218 (425)
T ss_pred EECchhcccccccceeEEEE
Confidence 56799987 566666555
No 257
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.06 E-value=1.3e-08 Score=94.58 Aligned_cols=176 Identities=13% Similarity=0.140 Sum_probs=114.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|.+.+ +++|.++|++||+++|+|+++..+ .... ......|++
T Consensus 139 ~e~l~~~i~---~~tklV~ie~p~NPtg~v~d----l~~I~~la~~~gi~livD~t~a~~-~~~~------~l~~~~Div 204 (398)
T PRK08249 139 HEQIEAEIA---KGCDLLYLETPTNPTLKIVD----IERLAAAAKKVGALVVVDNTFATP-INQN------PLALGADLV 204 (398)
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCcCcc-ccCC------chhhCCCEE
Confidence 456666664 45788999977777888777 999999999999999999998733 1111 112346666
Q ss_pred --EecccccC-Ccce-eEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 --TVGKPMGN-GMPI-GAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 --~~sK~l~~-G~p~-gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+++|.++| |-.+ |++++++++++.+.. +++..++.+.+.+.|++.
T Consensus 205 v~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 205 IHSATKFLSGHADALGGVVCGSKELMEQVYHYREINGATMDPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred eccCceecCCCCCceEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 46799986 4444 667778888776543 334555666666666653
Q ss_pred ----------------------cCceeEEEEecccHHHHHHHHHHH--HCCc--------EEeec---------------
Q psy11784 202 ----------------------LHIFWCLILLSITYYLYRYTRRMK--EAKI--------IVANE--------------- 234 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv--------~~~~~--------------- 234 (284)
.|.++.+++......+.+|++.|. ..++ +..|.
T Consensus 285 ~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~ 364 (398)
T PRK08249 285 AVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAAL 364 (398)
T ss_pred EEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhc
Confidence 466888888533344556666553 2232 11111
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 235 GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 235 ~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
+...+.|||+.- -|+.+.+++-|+++++.+++
T Consensus 365 gi~~~liR~svG----lE~~~dl~~dl~~al~~~~~ 396 (398)
T PRK08249 365 GIPEGLVRISVG----IEDTEDLIADLEQAFAHLES 396 (398)
T ss_pred CCCCCeEEEEec----cCCHHHHHHHHHHHHHHhhh
Confidence 112357888543 36788888888888877654
No 258
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.06 E-value=7.9e-09 Score=96.74 Aligned_cols=85 Identities=19% Similarity=0.240 Sum_probs=64.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++++|++|...+..|.+.+ +++|.++|++||+++|+||++. .+. ........+|++
T Consensus 132 ~~~l~~~l~---~~t~~V~le~p~NPtg~v~d----l~~I~~la~~~~i~livD~t~~-~~~------~~~~l~~g~Div 197 (418)
T TIGR01326 132 PEEFEKAID---ENTKAVFAETIGNPAINVPD----IEAIAEVAHAHGVPLIVDNTFA-TPY------LCRPIDHGADIV 197 (418)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc-hhh------cCCchhcCCeEE
Confidence 566777664 45788999988777787776 9999999999999999999985 211 112223347887
Q ss_pred --EecccccC-CcceeEEEecH
Q psy11784 157 --TVGKPMGN-GMPIGAVITSR 175 (284)
Q Consensus 157 --~~sK~l~~-G~p~gav~~~~ 175 (284)
+++|.+++ |.++|++++++
T Consensus 198 v~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 198 VHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred EECccccccCCccceEEEEEec
Confidence 57899997 79999988853
No 259
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.06 E-value=3.1e-09 Score=97.23 Aligned_cols=161 Identities=14% Similarity=0.127 Sum_probs=106.1
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcE---EEeccccc-CC
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI---ITVGKPMG-NG 165 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi---v~~sK~l~-~G 165 (284)
++.+|++...++-.|.+. +.+.+++|.+.|+ ++++|+||+|..|..... . .......+.+ -+|||.++ .|
T Consensus 147 ~~~li~i~nP~NPTG~~~-~~~~l~~l~~~~~--~~~vivDeay~~~~~~~s-~--~~~~~~~~~~iv~~S~SK~~~l~G 220 (354)
T PRK04635 147 GAKLVFICNPNNPTGTVI-DRADIEQLIEMTP--DAIVVVDEAYIEFCPEYS-V--ADLLASYPNLVVLRTLSKAFALAG 220 (354)
T ss_pred CCCEEEEeCCCCCCCccC-CHHHHHHHHHhCC--CcEEEEeCchHhhccCcc-h--HHHHhhCCCEEEEechHHHhhhhH
Confidence 456666666677778765 5666666666655 499999999987732111 1 1111112333 37899998 78
Q ss_pred cceeEEEecHHHHHhchh------------------h------------hhHHHHHHHHHHHHHhc--------cCceeE
Q psy11784 166 MPIGAVITSRKIAESLNC------------------L------------DDNRPSGKYLVRPLGIN--------LHIFWC 207 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~~------------------l------------~~~~~~~~~l~~~L~~~--------~G~~~~ 207 (284)
+++|++++++++++.+.. + +++++..+++.+.|+++ .|.++.
T Consensus 221 lRlG~~i~~~~~~~~l~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~g~f~~ 300 (354)
T PRK04635 221 ARCGFTLANEELIEILMRVIAPYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVLEGNGNYVL 300 (354)
T ss_pred HHHhhhhCCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceECCCCCcEEE
Confidence 999999999988876543 1 12344455666667653 344555
Q ss_pred EEEecccHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 208 LILLSITYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 208 i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
+.+ + ...++.+.|.++||.++..+. .++.+|++. .+++|++.++++|++
T Consensus 301 ~~~-~---~~~~~~~~l~~~gv~v~~~~~~~~~~~lRis~---~~~e~~~~l~~al~~ 351 (354)
T PRK04635 301 AKF-D---DVDAVFKALWDAGIVARAYKDPRLANCIRFSF---SNRAETDKLIGLIRN 351 (354)
T ss_pred EEC-C---CHHHHHHHHHHCCEEEEECCCCCCCCeEEEEe---CCHHHHHHHHHHHHH
Confidence 544 2 245788889999999986532 246899973 478999999988864
No 260
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.05 E-value=1.4e-08 Score=93.82 Aligned_cols=172 Identities=15% Similarity=0.121 Sum_probs=110.2
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+.+++.+. +++.+|++|...+..|...+ +++|.++|++||+++|+||+|+ .|-.+. ......|+++
T Consensus 126 e~l~~~i~---~~tklV~lesp~Np~g~~~d----l~~I~~la~~~g~~livD~t~a-~g~~~~------pl~~gaDivv 191 (377)
T TIGR01324 126 EDIATLIQ---PNTKVLFLEAPSSITFEIQD----IPAIAKAARNPGIVIMIDNTWA-AGLLFK------PLEHGVDISI 191 (377)
T ss_pred HHHHHhcC---CCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCCc-cccccC------ccccCceEEE
Confidence 44555553 46889999988888777666 9999999999999999999997 222222 1223468876
Q ss_pred e--cccccC--CcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 158 V--GKPMGN--GMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 158 ~--sK~l~~--G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
. +|.++| +.-.|+++++++..+.+.. +++..++...+.+.|++.
T Consensus 192 ~S~tK~l~G~~d~~gG~v~~~~~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~tl~~R~~~~~~~a~~la~~L~~~p~v~~ 271 (377)
T TIGR01324 192 QAGTKYLVGHSDIMIGTVVANARTWDQLREHSYLMGQMVDADDAYTTLRGLRTLGVRLKQHQESSLAIAKWLSEQPEVAR 271 (377)
T ss_pred ecCceeccCCCCceEEEEEeCHHHHHHHHHHHHHhCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHhCCCcCE
Confidence 5 799986 2556888888877665432 234444555555555543
Q ss_pred ---------------------cCceeEEEEec-ccHHHHHHHHHHHHCCcEEeecC---------------------CCC
Q psy11784 202 ---------------------LHIFWCLILLS-ITYYLYRYTRRMKEAKIIVANEG---------------------EYG 238 (284)
Q Consensus 202 ---------------------~G~~~~i~~~~-~~~~~~~~~~~l~~~Gv~~~~~~---------------------~~~ 238 (284)
.|.|+.+++.. ..+.+.+|.+.|.-.++-+.-++ ..+
T Consensus 272 v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~ 351 (377)
T TIGR01324 272 VLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEG 351 (377)
T ss_pred EECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCC
Confidence 46788888853 33456778877765443322111 112
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.|||+.-+ |+.+.+++-|+++++.
T Consensus 352 ~liR~svGl----E~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 352 PLIRVHIGL----ENVDDLKADLKAGFEA 376 (377)
T ss_pred CEEEEEeCC----CCHHHHHHHHHHHHhc
Confidence 456774333 5566677777666653
No 261
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.04 E-value=2.5e-08 Score=94.10 Aligned_cols=170 Identities=21% Similarity=0.289 Sum_probs=108.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE--ecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA--DEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+. +++++|++... +..|.+.+ +++|.++|+++|+++|+ |.+..|+ ... . .....|
T Consensus 194 ~~~l~~~i~---~~t~~v~l~~p-n~tG~v~~----l~~I~~~a~~~~~~~iv~~d~~~~g~--~~~----~--~~~~~D 257 (447)
T PRK00451 194 LEALEAAVD---DDTAAVVVQYP-NFFGVIED----LEEIAEIAHAGGALFIVGVDPVSLGL--LKP----P--GEYGAD 257 (447)
T ss_pred HHHHHHhcC---CCeEEEEEECC-CCCCeeCC----HHHHHHHHHHCCCEEEEEcChHHhcc--CCC----c--ccCCCC
Confidence 577777664 46778877754 66787766 99999999999999998 6543221 110 0 123456
Q ss_pred EEEe-----ccccc-CCcceeEEEecHHHHHhc----------------------------hh-----------------
Q psy11784 155 IITV-----GKPMG-NGMPIGAVITSRKIAESL----------------------------NC----------------- 183 (284)
Q Consensus 155 iv~~-----sK~l~-~G~p~gav~~~~~i~~~~----------------------------~~----------------- 183 (284)
+++. ||... +|..+|++.+++++.+.+ +.
T Consensus 258 ~~~~s~~k~~~~~~~~Gpg~G~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 337 (447)
T PRK00451 258 IVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALA 337 (447)
T ss_pred EEEECCCcCCCCCCCCCCCchHHHhhHHHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHH
Confidence 6644 34433 345577777777666552 00
Q ss_pred ----------------hhhHHHHHHHHHHHHHhccCc------eeE---EEEecccHHHHHHHHHHHHCCcEEe-ecCC-
Q psy11784 184 ----------------LDDNRPSGKYLVRPLGINLHI------FWC---LILLSITYYLYRYTRRMKEAKIIVA-NEGE- 236 (284)
Q Consensus 184 ----------------l~~~~~~~~~l~~~L~~~~G~------~~~---i~~~~~~~~~~~~~~~l~~~Gv~~~-~~~~- 236 (284)
.++..++.+++.++|+++.|+ ++. +.+ + ....+++++|.++|+... +..+
T Consensus 338 aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~v~~-~--~~~~~~~~~L~~~gi~~~~~~~~~ 414 (447)
T PRK00451 338 AAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDGPFFNEFVVRL-P--KPAEEVNEALLEKGILGGYDLGRY 414 (447)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCCCeEEEEEEec-C--CCHHHHHHHHHhcCCCCCcccccc
Confidence 224556667777777764121 111 222 1 235789999999988743 1111
Q ss_pred ---CCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 237 ---YGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 237 ---~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
..+.+|++++...|+++++++++.|++++
T Consensus 415 ~~~~~~~~rvs~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 415 YPELGNHLLVCVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred cCCcCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 13689999998899999999999998754
No 262
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.04 E-value=2.2e-08 Score=92.91 Aligned_cols=173 Identities=11% Similarity=0.096 Sum_probs=111.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++.- +..+. ..+...|++
T Consensus 134 ~e~l~~~i~---~~tklV~le~p~Np~G~v~d----l~~I~~la~~~gi~livD~a~a~-~~~~~------~~~~g~Div 199 (391)
T TIGR01328 134 PEEVKAHIK---DNTKIVYFETPANPTMKLID----MERVCRDAHSQGVKVIVDNTFAT-PMLTN------PVALGVDVV 199 (391)
T ss_pred HHHHHHhhc---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCch-hccCC------chhcCCCEE
Confidence 455666554 45789999988887887776 99999999999999999999862 22222 122346776
Q ss_pred --EecccccC-Ccc-eeEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 157 --TVGKPMGN-GMP-IGAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 157 --~~sK~l~~-G~p-~gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+++|.+++ |.+ .|++++++++++.+.. +++..++.+++.+.|+..
T Consensus 200 v~S~sK~lgg~g~~~gG~v~~~~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~ 279 (391)
T TIGR01328 200 VHSATKYIGGHGDVVAGLICGKAELLQQIRMVGIKDMTGSVISPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPA 279 (391)
T ss_pred EccccccccCCCCceEEEEEcCHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 45799986 555 4777788887765542 234555666777777654
Q ss_pred ------------------------cCceeEEEEecccHHHHHHHHHHH--HCCcEE--------eec-------------
Q psy11784 202 ------------------------LHIFWCLILLSITYYLYRYTRRMK--EAKIIV--------ANE------------- 234 (284)
Q Consensus 202 ------------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv~~--------~~~------------- 234 (284)
.|.++.+++.+..+.+.+|++.|. ..+.-+ .|.
T Consensus 280 v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 359 (391)
T TIGR01328 280 VEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEERE 359 (391)
T ss_pred ccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHH
Confidence 366888888533344556666553 112111 110
Q ss_pred --CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 235 --GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 235 --~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+...+.+||+.-+ |+.+.+++-|+++++.
T Consensus 360 ~~gi~~~liR~svGl----E~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 360 AAGITDGMIRLSVGL----EDADDLIADLKQALDA 390 (391)
T ss_pred hcCCCCCeEEEEeCc----CCHHHHHHHHHHHHhh
Confidence 0113567885433 6688888888888764
No 263
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.04 E-value=4.6e-09 Score=100.19 Aligned_cols=90 Identities=12% Similarity=0.251 Sum_probs=61.9
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~p 153 (284)
.+++++++. +++.+|+ +.| .+-.|. ..+++.+++|.++|++| ++++|.||+|..|.. . +.+. ....|
T Consensus 230 ~~~l~~~~~---~~~kai~l~nP-~NPTG~-vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~--~-~~sl--~~~~~ 299 (521)
T TIGR03801 230 DKELEKLRD---PSIKALFVVNP-SNPPSV-AMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD--D-FRSL--FAELP 299 (521)
T ss_pred HHHHHHhcC---CCCcEEEEeCC-CCCCCC-CCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc--c-ccch--hhhCC
Confidence 455665443 4566665 566 344554 66899999999999987 999999999987632 2 1111 11234
Q ss_pred c----EEEeccccc-CCcceeEEEecHH
Q psy11784 154 D----IITVGKPMG-NGMPIGAVITSRK 176 (284)
Q Consensus 154 D----iv~~sK~l~-~G~p~gav~~~~~ 176 (284)
| +.+|||.++ .|+++|+++++++
T Consensus 300 ~~vI~v~SfSK~fg~~G~RlG~i~~~~~ 327 (521)
T TIGR03801 300 YNTIGVYSFSKYFGATGWRLGTIALHKD 327 (521)
T ss_pred CCEEEEEcchhhccCchhhhhhhhcCch
Confidence 3 236899997 6899999999754
No 264
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.04 E-value=3.8e-08 Score=99.95 Aligned_cols=238 Identities=17% Similarity=0.202 Sum_probs=142.8
Q ss_pred cHHHHHHHHHHHcc---C--CccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHH
Q psy11784 2 EANDLALQLARAYT---G--RQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKY 76 (284)
Q Consensus 2 eA~e~AlklAr~~~---~--r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (284)
.++.+++..+|.|. | ++.++....+=||....+....+.+ +..+|.... + +-|
T Consensus 569 ~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~----------vv~v~~d~~--G--~iD-------- 626 (954)
T PRK05367 569 QGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK----------VVVVACDEN--G--NID-------- 626 (954)
T ss_pred HHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE----------EEEECCCCC--C--CcC--------
Confidence 34557777778763 2 2345556677777655443332221 222332211 1 111
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++|++.++.+..++++|++---...|+...+ +++|.++|+++|+++++|.++.+- -.+. . ..-..-.|++
T Consensus 627 ~~~L~~~i~~~~~~la~V~it~pst~G~~e~~----I~eI~~i~h~~G~~v~VDgA~~~a-l~~l---~-~pg~~GADi~ 697 (954)
T PRK05367 627 LDDLRAKAEEHADNLAAIMITYPSTHGVFEET----IREICEIVHEHGGQVYLDGANMNA-QVGL---A-RPGDIGADVS 697 (954)
T ss_pred HHHHHHHHhccCCCeEEEEEEcCCCCeeecCC----HHHHHHHHHHcCCEEEEECcChhh-ccCC---C-ChhhcCCCEE
Confidence 67888888754456777655432222333345 999999999999999999999621 1111 1 0112336888
Q ss_pred Eec--cccc----CC-cceeEEEecHHHHHhchh----------------------------------------hh----
Q psy11784 157 TVG--KPMG----NG-MPIGAVITSRKIAESLNC----------------------------------------LD---- 185 (284)
Q Consensus 157 ~~s--K~l~----~G-~p~gav~~~~~i~~~~~~----------------------------------------l~---- 185 (284)
+++ |.++ +| -.+|.+.+++.+...+.. +.
T Consensus 698 ~~s~HK~f~~P~G~GGPg~G~l~vr~~l~p~lpg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~G~~Glr~~a~ 777 (954)
T PRK05367 698 HLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMMGAEGLRQATE 777 (954)
T ss_pred EecCcccCCCCcCCCCCceEEEeecccccccCCCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 776 9885 23 336666666554322111 11
Q ss_pred hHHHHHHHHHHHHHhccCc---------ee--EEEEe--cc--cHHHHHHHHHHHHCCcEEeecC-CCCCEEEEEcCCCC
Q psy11784 186 DNRPSGKYLVRPLGINLHI---------FW--CLILL--SI--TYYLYRYTRRMKEAKIIVANEG-EYGNVLLFLPAMCL 249 (284)
Q Consensus 186 ~~~~~~~~l~~~L~~~~G~---------~~--~i~~~--~~--~~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~~ 249 (284)
+...+.+|+.++|.+.... +. .+++. +. ......+.++|.+.|+...... +..+.+++.|.-..
T Consensus 778 ~~~~~A~Yl~~~L~~~~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~d~G~~~~t~~~pv~~~l~i~ptE~~ 857 (954)
T PRK05367 778 VAILNANYIAKRLKDHYPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFPVAGTLMVEPTESE 857 (954)
T ss_pred HHHHHHHHHHHHHHhhcCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHHHCCCeEeecCCccCCEEEEEeeecC
Confidence 2335777888888764111 11 11221 11 1346789999999999876521 23678999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHhh
Q psy11784 250 TTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~~~~~ 270 (284)
|++|||++++++.++.+++.+
T Consensus 858 s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 858 SKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999888765
No 265
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.04 E-value=3.2e-08 Score=89.92 Aligned_cols=180 Identities=14% Similarity=0.063 Sum_probs=128.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+++|++.|+ +++..|-+=-+.++-|.+.| +++|.++|+++|+++.+|-||+ +|+. ..+......|++
T Consensus 131 ~e~L~~al~---~~T~LVSim~aNnE~G~IQp----I~ei~~i~k~~~i~fHvDAvQa-~Gki-----pi~~~~~~vD~l 197 (386)
T COG1104 131 LEQLEEALR---PDTILVSIMHANNETGTIQP----IAEIGEICKERGILFHVDAVQA-VGKI-----PIDLEELGVDLL 197 (386)
T ss_pred HHHHHHhcC---CCceEEEEEecccCeeeccc----HHHHHHHHHHcCCeEEEehhhh-cCce-----eccccccCcceE
Confidence 678888876 66888888888999999999 9999999999999999999997 6553 223333348999
Q ss_pred Eecc-cccCCcceeEEEecHHHHHh-chh-----------------------------------hhhHHHHHHHHHHHHH
Q psy11784 157 TVGK-PMGNGMPIGAVITSRKIAES-LNC-----------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 157 ~~sK-~l~~G~p~gav~~~~~i~~~-~~~-----------------------------------l~~~~~~~~~l~~~L~ 199 (284)
+||- .++|-=.+|+++.++.+.-. +.. ..++..+.++|.+.|.
T Consensus 198 s~SaHK~~GpkGiGaLyv~~~~~~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~ 277 (386)
T COG1104 198 SFSAHKFGGPKGIGALYVRPGVRLEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLL 277 (386)
T ss_pred EeehhhccCCCceEEEEECCCCccCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8872 23332357888876644211 110 2367778888888888
Q ss_pred hc------cCc-------eeEEEEecccHHHHHHHHHHHHCCcEEeecCC---------------------CCCEEEEEc
Q psy11784 200 IN------LHI-------FWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------YGNVLLFLP 245 (284)
Q Consensus 200 ~~------~G~-------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------~~~~lr~~p 245 (284)
+. .|. .+.+.+ ....+..+...|-.+||.+..++. -...|||+.
T Consensus 278 ~~~p~~~~~g~~~~rlP~~~~~~f--~gv~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~ 355 (386)
T COG1104 278 EIIPDVYLNGDDEPRLPNILNFSF--PGVEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSL 355 (386)
T ss_pred hcCCcEEEcCCcccCCCCeEEEEe--CCCcHHHHHHhccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEc
Confidence 64 111 122222 123466677777788999976521 115799999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 246 AMCLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
.-..|++|+|.+++.|.++++.+++.
T Consensus 356 g~~tt~eei~~~~~~l~~~i~~lr~~ 381 (386)
T COG1104 356 GRFTTEEEIDAAAEALKEIIKRLREL 381 (386)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhhh
Confidence 99999999999999999999988653
No 266
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.03 E-value=9e-09 Score=95.39 Aligned_cols=173 Identities=16% Similarity=0.132 Sum_probs=116.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||+++. +-.+. .. ..| .|++
T Consensus 136 ~~~l~~~i~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~g~~vivD~a~a~-~~~~~-pl---~~g--~Div 201 (386)
T PRK06767 136 EADIENKIR---PNTKLIFVETPINPTMKLID----LKQVIRVAKRNGLLVIVDNTFCS-PYLQR-PL---ELG--CDAV 201 (386)
T ss_pred HHHHHHhhC---cCceEEEEeCCCCCCceecC----HHHHHHHHHHcCCEEEEECCCcc-cccCC-ch---hcC--CcEE
Confidence 455666554 45788999988888888777 89999999999999999999852 11222 11 123 4776
Q ss_pred E--ecccccC-Ccce-eEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGN-GMPI-GAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~-G~p~-gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ ++|.++| |.++ |+++++++.++.+.. +++.+++.+++.+.|++.
T Consensus 202 ~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v 281 (386)
T PRK06767 202 VHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAV 281 (386)
T ss_pred EecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 4 5699987 5665 788888876655321 346667778888888765
Q ss_pred -----------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-------------------------CCC
Q psy11784 202 -----------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-------------------------YGN 239 (284)
Q Consensus 202 -----------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------------------~~~ 239 (284)
.|-++.+++....+...+|.+.|...++.+.-++. ..+
T Consensus 282 ~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~ 361 (386)
T PRK06767 282 EGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDN 361 (386)
T ss_pred cEEECCCcHHHHHhCCCCCceEEEEEcCCHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCC
Confidence 24567788743335677888888776655543211 124
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 240 VLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 240 ~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.+||+.-+ |+.+.+++-|+++++.
T Consensus 362 l~R~svGl----E~~~dl~~dl~~al~~ 385 (386)
T PRK06767 362 LIRLSVGL----ESWEDIVSDLEQALKK 385 (386)
T ss_pred eEEEEecc----CCHHHHHHHHHHHHhh
Confidence 67775433 5677777777777653
No 267
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.03 E-value=2.5e-08 Score=93.63 Aligned_cols=83 Identities=17% Similarity=0.295 Sum_probs=61.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.+.+ +++|.++|++||+++|+|++++. + +........+|++
T Consensus 138 ~~~l~~ai~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~a~a~----~---~~~~pl~~gaDiv 203 (427)
T PRK05994 138 PASFERAIT---PRTKAIFIESIANPGGTVTD----IAAIAEVAHRAGLPLIVDNTLAS----P---YLIRPIEHGADIV 203 (427)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCccc----c---ccCCccccCCcEE
Confidence 466676664 46889999998888888877 99999999999999999999962 1 1223334568887
Q ss_pred E--ecccccC-CcceeEEEe
Q psy11784 157 T--VGKPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 ~--~sK~l~~-G~p~gav~~ 173 (284)
+ ++|.++| |-++|+++.
T Consensus 204 v~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 204 VHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred EEcCccccCCCCCcEEEEEE
Confidence 6 6699986 445565444
No 268
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.03 E-value=9.6e-08 Score=96.01 Aligned_cols=233 Identities=16% Similarity=0.206 Sum_probs=147.9
Q ss_pred HHHHHHHHcc-----CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 6 LALQLARAYT-----GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 6 ~AlklAr~~~-----~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
+++..+|.|. +++.++....+-||....+....+.+ +..+|... .+. -| +++|
T Consensus 561 agL~aiR~y~~~rge~~R~~vlip~saHgtnPasa~~~G~~----------Vv~V~~d~--~G~--iD--------le~L 618 (939)
T TIGR00461 561 AGLRVIRSYHESRGENHRNICLIPVSAHGTNPASAAMAGMQ----------VVPVNCDQ--DGN--ID--------LVDL 618 (939)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEccccCcCHHHHHHCCCE----------EEEeccCC--CCC--cC--------HHHH
Confidence 3677777763 24556777899999775554333222 12233211 111 11 7889
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCcEEEec
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPDIITVG 159 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pDiv~~s 159 (284)
++.++.+++++++|++--.... |.+.++ +++|.++|+++|.++++|=++.. .+ + .. ..-..-.|+++++
T Consensus 619 ~~~i~~~~~~taaV~iT~pst~-G~~e~~---I~eI~~iah~~G~~v~VDgAq~~al~--~---l~-~Pg~~GaDi~~~s 688 (939)
T TIGR00461 619 KNKAEQHGDELAAVMVTYPSTH-GVFEPT---IQHACDIVHSFGGQVYLDGANMNAQV--G---LT-SPGDLGADVCHLN 688 (939)
T ss_pred HHHHhhcCCceEEEEEEeCCcC-ceeccc---HHHHHHHHHHcCCEEEEEecChhhCC--C---CC-CccccCCCEEEec
Confidence 9999865567888877543333 444322 89999999999999999988863 21 1 11 1122457998884
Q ss_pred --cccc-----CCcceeEEEecHHHHHhchh--------------------------------------------hh---
Q psy11784 160 --KPMG-----NGMPIGAVITSRKIAESLNC--------------------------------------------LD--- 185 (284)
Q Consensus 160 --K~l~-----~G~p~gav~~~~~i~~~~~~--------------------------------------------l~--- 185 (284)
|+++ ||--+|.+.+++++...+.. +.
T Consensus 689 ~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a 768 (939)
T TIGR00461 689 LHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKAS 768 (939)
T ss_pred CCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHHHCHHHHHHHH
Confidence 9887 45557888888665433321 11
Q ss_pred -hHHHHHHHHHHHHHhc-----cC--ceeEEEEe----cc----cHHHHHHHHHHHHCCcEEeecC-CCCCEEEEEcCCC
Q psy11784 186 -DNRPSGKYLVRPLGIN-----LH--IFWCLILL----SI----TYYLYRYTRRMKEAKIIVANEG-EYGNVLLFLPAMC 248 (284)
Q Consensus 186 -~~~~~~~~l~~~L~~~-----~G--~~~~i~~~----~~----~~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~ 248 (284)
..-.+..|+.++|.+. .| -.+.-++. +. .....++.++|++.|+...... +..+.+-+.|.-.
T Consensus 769 ~~ailnAnYl~~rL~~~~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~d~G~hapt~~~pv~g~lmiepTE~ 848 (939)
T TIGR00461 769 VVAILNANYMATRLKDHYPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQDYGFHAPTLSFPVPGTLMVEPTES 848 (939)
T ss_pred HHHHHHHHHHHHHhhccCcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHHhCCeeccccCCccCCeEEEEeecc
Confidence 3334667888888654 11 02122222 11 1347889999999999865432 2235788889999
Q ss_pred CCHHHHHHHHHHHHHHHHHHhh
Q psy11784 249 LTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|++|||++++.+.++-+++.+
T Consensus 849 eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 849 ESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999998887754
No 269
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.02 E-value=8.8e-09 Score=93.68 Aligned_cols=152 Identities=23% Similarity=0.260 Sum_probs=98.4
Q ss_pred EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE---Eeccccc-CCccee
Q psy11784 94 LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII---TVGKPMG-NGMPIG 169 (284)
Q Consensus 94 vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv---~~sK~l~-~G~p~g 169 (284)
++..| ++-.|...+ .++|.+++ ++++++|+||+|..|.. .. ... .....+.++ +|||.++ .|+++|
T Consensus 145 ~~~~P-~NPtG~~~~----~~~l~~i~-~~~~~ii~De~y~~~~~-~~-~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG 214 (337)
T PRK03967 145 FICSP-NNPTGNLQP----EEEILKVL-ETGKPVVLDEAYAEFSG-KS-LIG--LIDEYPNLILLRTFSKAFGLAGIRAG 214 (337)
T ss_pred EEeCC-CCCCCCCCC----HHHHHHHH-hcCCEEEEECchhhhcc-cc-hHH--HHhhCCCEEEEecchHhhcchhhhhe
Confidence 34455 666776654 45666777 47999999999988731 12 111 111123333 6899999 899999
Q ss_pred EEEecHHHHHhchh------------------h----------hhHHHHHHHHHHHHHhc----cCceeEEEEecccHHH
Q psy11784 170 AVITSRKIAESLNC------------------L----------DDNRPSGKYLVRPLGIN----LHIFWCLILLSITYYL 217 (284)
Q Consensus 170 av~~~~~i~~~~~~------------------l----------~~~~~~~~~l~~~L~~~----~G~~~~i~~~~~~~~~ 217 (284)
++++++++++.+.. + +...+..+.+.+.|.+. .|.++++.+
T Consensus 215 ~iv~~~~~i~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~~------- 287 (337)
T PRK03967 215 YAIANEEIIDALYRIKPPFSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEYAYPSDANFLLLKL------- 287 (337)
T ss_pred eeecCHHHHHHHHhhcCCCCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCcEEEEhH-------
Confidence 99999998877654 1 12233334445555442 344554443
Q ss_pred HHHHHHHHHCCcEEeecC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 218 YRYTRRMKEAKIIVANEG-EYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.+.+.|.++||.+.+.. ...+.+|+.. .+.++.+++++.|+++.+
T Consensus 288 -~~~~~l~~~gi~v~~~~~~~~~~~Ri~~---~~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 288 -DAYDYLLENGIVVRKLSGRLEGHIRVTV---GKREENDEFIKALKEIKE 333 (337)
T ss_pred -HHHHHHHHCCEEEEeCCCCCCCeEEEec---CCHHHHHHHHHHHHHHHH
Confidence 26788899999998653 2346899963 367888888888877654
No 270
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.01 E-value=1.2e-07 Score=96.23 Aligned_cols=222 Identities=16% Similarity=0.182 Sum_probs=145.0
Q ss_pred ccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHHHHHHhcCCCeeEEEEc
Q psy11784 18 QNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICE 97 (284)
Q Consensus 18 ~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~vaavi~E 97 (284)
++++....+=||.-.......+.+ +..+|... .+ .-| +++|++.++.+.+++++|++-
T Consensus 616 r~~vli~~~aH~sn~a~a~~~G~~----------vv~v~~d~--~G--~vD--------le~L~~~i~~~~~~ta~V~vt 673 (993)
T PLN02414 616 RNVCIIPVSAHGTNPASAAMCGMK----------IVVVGTDA--KG--NIN--------IEELRKAAEAHKDNLAALMVT 673 (993)
T ss_pred CCEEEeCCCcCccCHHHHHHCCCE----------EEEeccCC--CC--CcC--------HHHHHHHHhccCCCeEEEEEE
Confidence 456777788888766554443222 12233321 11 111 788999998655679999888
Q ss_pred ceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEe--ccccc-----CCcceeE
Q psy11784 98 PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITV--GKPMG-----NGMPIGA 170 (284)
Q Consensus 98 pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~--sK~l~-----~G~p~ga 170 (284)
-....+|...+ +++|.++|+++|+++++|=+|.- +-.|. ......-.|++++ .|+++ ||-.+|.
T Consensus 674 ~pSn~gg~e~~----I~eI~~iah~~Galv~vDgAq~~-a~~~l----~~p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~ 744 (993)
T PLN02414 674 YPSTHGVYEEG----IDEICDIIHDNGGQVYMDGANMN-AQVGL----TSPGFIGADVCHLNLHKTFCIPHGGGGPGMGP 744 (993)
T ss_pred CCCccccccch----HHHHHHHHHHcCCEEEEEecCHH-hccCc----CCccccCCCEEEecCCccCCcCcccCCCCeee
Confidence 77777888777 99999999999999999998861 11111 1111234788876 48775 2334777
Q ss_pred EEecHHHHHhchh----------------------------------------------h----hhHHHHHHHHHHHHHh
Q psy11784 171 VITSRKIAESLNC----------------------------------------------L----DDNRPSGKYLVRPLGI 200 (284)
Q Consensus 171 v~~~~~i~~~~~~----------------------------------------------l----~~~~~~~~~l~~~L~~ 200 (284)
+.+++++...+.. + ++...+..|++++|.+
T Consensus 745 l~~~~~L~p~lPg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~ 824 (993)
T PLN02414 745 IGVKKHLAPFLPSHPVVPTGGIPRPEKTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEG 824 (993)
T ss_pred EEEchhhcccCCCCccccCCCcccccCCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777766543221 2 1345567788888866
Q ss_pred ccCc-------eeEEEEe---c-c----cHHHHHHHHHHHHCCcEEeecC-CCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 201 NLHI-------FWCLILL---S-I----TYYLYRYTRRMKEAKIIVANEG-EYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 201 ~~G~-------~~~i~~~---~-~----~~~~~~~~~~l~~~Gv~~~~~~-~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
..+. .+.-++. . . ...+..+.++|++.|+...... +..+.+|+.|.-..|++|||++++++.++
T Consensus 825 ~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~d~Gihapt~~~pv~~~lmiepTE~~skeelDrf~~al~~i 904 (993)
T PLN02414 825 HYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLMDYGFHAPTMSWPVPGTLMIEPTESESKAELDRFCDALISI 904 (993)
T ss_pred hCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHHHcCcEEeeeccccCCEEEEEeeeeCCHHHHHHHHHHHHHH
Confidence 5111 1111222 1 0 1345789999999999875422 24678999999999999999999999999
Q ss_pred HHHHhh
Q psy11784 265 FTSLQM 270 (284)
Q Consensus 265 l~~~~~ 270 (284)
.++..+
T Consensus 905 ~~e~~~ 910 (993)
T PLN02414 905 REEIAD 910 (993)
T ss_pred HHHHHH
Confidence 888764
No 271
>KOG0257|consensus
Probab=99.01 E-value=1.1e-09 Score=98.79 Aligned_cols=156 Identities=15% Similarity=0.161 Sum_probs=104.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcc--cccc--ccCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHF--WAFQ--TQGAV 152 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~--~a~~--~~g~~ 152 (284)
.+++|..+. ..+.+|++..-.+-.|- +.+++.|++|.++|++||.++|.||||.-+-..|..+ +++. .+..+
T Consensus 162 ~~~le~~~t---~kTk~Ii~ntPhNPtGk-vfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ert 237 (420)
T KOG0257|consen 162 PEELESKIT---EKTKAIILNTPHNPTGK-VFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERT 237 (420)
T ss_pred hHHHHhhcc---CCccEEEEeCCCCCcCc-ccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheE
Confidence 567777765 45677777655555665 5699999999999999999999999998654455311 2221 11122
Q ss_pred CcEEEecccccC-CcceeEEEecHHHHHhchh---------------------------------------hhhHHHHHH
Q psy11784 153 PDIITVGKPMGN-GMPIGAVITSRKIAESLNC---------------------------------------LDDNRPSGK 192 (284)
Q Consensus 153 pDiv~~sK~l~~-G~p~gav~~~~~i~~~~~~---------------------------------------l~~~~~~~~ 192 (284)
-.+-.+||.++- ||++||+++.+.++..... .+.++++.+
T Consensus 238 itvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krd 317 (420)
T KOG0257|consen 238 ITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRD 317 (420)
T ss_pred EEeccccceeeeeeeeeeeeechHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHH
Confidence 334468999995 9999999998888776544 114566777
Q ss_pred HHHHHHHhc--------cCceeEEEEe-----cc-cH-----HHHHHHHHHH-HCCcEEeecCC
Q psy11784 193 YLVRPLGIN--------LHIFWCLILL-----SI-TY-----YLYRYTRRMK-EAKIIVANEGE 236 (284)
Q Consensus 193 ~l~~~L~~~--------~G~~~~i~~~-----~~-~~-----~~~~~~~~l~-~~Gv~~~~~~~ 236 (284)
.|.+.|.++ .+.++..++. +. ++ ....+++.+. +.|+.+.|...
T Consensus 318 il~k~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~sa 381 (420)
T KOG0257|consen 318 ILAKALEELGLKVTGPEGAYYLWADFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSA 381 (420)
T ss_pred HHHHHHHhcCCccccCCCceEEEEeccccccCCcchhhccCCCceeeehhhhccCcEEEeCchh
Confidence 788888876 3445666765 11 01 2334666666 55887776543
No 272
>PRK06460 hypothetical protein; Provisional
Probab=99.00 E-value=1.4e-08 Score=93.70 Aligned_cols=165 Identities=15% Similarity=0.141 Sum_probs=110.0
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE--EecccccC--
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII--TVGKPMGN-- 164 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv--~~sK~l~~-- 164 (284)
+++.+|++|...+..|.+.+ +++|.++|++||+++|+||+|..+ .... .. ..+ .|++ +++|.++|
T Consensus 129 ~~tklV~l~sp~NPtG~v~d----~~~I~~la~~~g~~vivDea~~~~-~~~~---~l-~~~--~divv~S~sK~l~G~~ 197 (376)
T PRK06460 129 KRYDVVFVENITNPLLRVVD----ITELSKVCKENGSILIVDATFSTP-INQK---PL-ELG--ADIVVHSASKFLAGHN 197 (376)
T ss_pred CCceEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcCcc-ccCC---hh-hcC--CCEEEeecceeccCCC
Confidence 45789999999998898887 789999999999999999998632 1111 11 122 5665 67899975
Q ss_pred CcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----------------
Q psy11784 165 GMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---------------- 201 (284)
Q Consensus 165 G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---------------- 201 (284)
+...|++++++++++.+.. +++..++.+++.+.|++.
T Consensus 198 ~~~~G~~~~~~~l~~~l~~~~~~~g~~~~~~~a~~~l~~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~ 277 (376)
T PRK06460 198 DVIAGLAAGYGKLLNVIDQMRRTLGTSLDPHAAYLTLRGIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVD 277 (376)
T ss_pred CceEEEEecCHHHHHHHHHHHHhcCCCCCHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCcc
Confidence 2568899999988877653 335666677777777753
Q ss_pred ----------cCceeEEEEecccHHHHHHHHHHH--HCCc--------EEeec---------------CCCCCEEEEEcC
Q psy11784 202 ----------LHIFWCLILLSITYYLYRYTRRMK--EAKI--------IVANE---------------GEYGNVLLFLPA 246 (284)
Q Consensus 202 ----------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv--------~~~~~---------------~~~~~~lr~~p~ 246 (284)
.|.|+.+++......+.+|++.+. ..+. +..|. +...+.||++.-
T Consensus 278 ~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svG 357 (376)
T PRK06460 278 YEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVG 357 (376)
T ss_pred HHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEec
Confidence 467888888533345566666553 1111 11111 112357888543
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~ 268 (284)
-||.+.+++-|+++|+.+
T Consensus 358 ----lE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 358 ----IEDVNDLIEDLDRALSTL 375 (376)
T ss_pred ----cCCHHHHHHHHHHHHHhh
Confidence 367788888888887653
No 273
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=98.98 E-value=8.6e-08 Score=88.92 Aligned_cols=172 Identities=13% Similarity=0.135 Sum_probs=106.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.... +++|.++|++||+++|+||++... ..+. . .+...|++
T Consensus 136 ~e~l~~~i~---~~tklV~ie~p~NPtg~~~d----l~~I~~la~~~gi~lIvD~a~a~~-~~~~-p-----~~~gaDiv 201 (388)
T PRK07811 136 LDAVRAAIT---PRTKLIWVETPTNPLLSITD----IAALAELAHDAGAKVVVDNTFASP-YLQQ-P-----LALGADVV 201 (388)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCcceecC----HHHHHHHHHHcCCEEEEECCCCcc-ccCC-c-----hhhCCcEE
Confidence 566666664 46789999977777776665 999999999999999999998632 2222 1 12335776
Q ss_pred E--ecccccC-C-cceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGN-G-MPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~-G-~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ ++|.++| | ...|+++++ +++.+.+.. +++..++.+.+.+.|++.
T Consensus 202 v~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~tl~~R~~~~~~na~~la~~L~~~p~v 281 (388)
T PRK07811 202 VHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTLRGLKTLAVRMDRHSENAEAVAEFLAGHPEV 281 (388)
T ss_pred EecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCe
Confidence 5 5699986 3 456887775 555443322 224444566666666644
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHH--HCCc--------EEeec------------CC
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMK--EAKI--------IVANE------------GE 236 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv--------~~~~~------------~~ 236 (284)
.|.|+.+++......+.+|...|. ..|. +..|. +.
T Consensus 282 ~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~gi 361 (388)
T PRK07811 282 STVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHASTAGSQLEV 361 (388)
T ss_pred eEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcceeeccCCCCcceEeCCcccCcccCCHhhcCC
Confidence 466889998533345566666544 2221 11111 01
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 237 YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 237 ~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
..+.|||+.-+ |+.+.+++-|+++++
T Consensus 362 ~~~liR~svGl----E~~~dl~~dl~~al~ 387 (388)
T PRK07811 362 PDDLVRLSVGI----EDVADLLADLEQALG 387 (388)
T ss_pred CCCEEEEEeCC----CCHHHHHHHHHHHhh
Confidence 13578885444 566677777766653
No 274
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=98.97 E-value=3.7e-08 Score=91.47 Aligned_cols=172 Identities=15% Similarity=0.139 Sum_probs=106.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++|...+..|.+.+ +++|.++|++||+++|+|+++... .... .. ....|++
T Consensus 136 ~~~l~~~i~---~~tklV~ie~p~NptG~v~d----l~~I~~la~~~gi~livD~t~~~~-~~~~-pl-----~~g~Div 201 (390)
T PRK08133 136 LDAWRAAVR---PNTKLFFLETPSNPLTELAD----IAALAEIAHAAGALLVVDNCFCTP-ALQQ-PL-----KLGADVV 201 (390)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCCccc-ccCC-ch-----hhCCcEE
Confidence 456666664 46889999988777888776 899999999999999999998521 1111 11 1225776
Q ss_pred E--ecccccC-Ccce-eEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 T--VGKPMGN-GMPI-GAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 ~--~sK~l~~-G~p~-gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
+ ++|.+++ |.++ |+++++++.++.+.. +++..++...+.+.|++.
T Consensus 202 v~S~sK~~~g~g~~~GG~vv~~~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~ 281 (390)
T PRK08133 202 IHSATKYLDGQGRVLGGAVVGSKELMEEVFGFLRTAGPTLSPFNAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVE 281 (390)
T ss_pred EeecceeecCCcceEeEEEEcCHHHHHHHHHHHHHhCCCCCHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 4 5799986 5666 566677776554332 234445555666666644
Q ss_pred ----------------------cCceeEEEEecccHHHHHHHHHHH--HCCcEE--------eec---------------
Q psy11784 202 ----------------------LHIFWCLILLSITYYLYRYTRRMK--EAKIIV--------ANE--------------- 234 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv~~--------~~~--------------- 234 (284)
.|.|+.+++....+.+.+|.+.|. ..+.-+ .|.
T Consensus 282 ~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~ 361 (390)
T PRK08133 282 RVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHGRLSPEARAAA 361 (390)
T ss_pred EEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHHhCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhc
Confidence 466888888533344556666554 222111 111
Q ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 235 GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 235 ~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+...+.||++.-+ |+.+.+++-|+++|+
T Consensus 362 gi~~~liR~svGl----E~~~dl~~dl~~al~ 389 (390)
T PRK08133 362 GITEGLIRVAVGL----EDVADIKADLARGLA 389 (390)
T ss_pred CCCCCeEEEEeCc----CCHHHHHHHHHHHhh
Confidence 0113567875333 567777777777764
No 275
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.97 E-value=1.2e-07 Score=94.91 Aligned_cols=184 Identities=16% Similarity=0.109 Sum_probs=120.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
+++|++.++++.+++++|++--....|+...+ +++|.++|+++|+++++|=++. +.+. +. ..-.+-.|+
T Consensus 628 le~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~----V~eI~~iah~~Galv~vDgA~~~a~~~-----l~-~Pg~~GADi 697 (954)
T PRK12566 628 LDDLKAKAAAAGDRLSCLMITYPSTHGVYEEG----IREICEVVHQHGGQVYMDGANLNAQVG-----LA-RPADIGADV 697 (954)
T ss_pred HHHHHHHhhccCCCEEEEEEEecCcCceecch----HHHHHHHHHHcCCEEEEEeeChhhccC-----CC-ChhhcCCCE
Confidence 78899988766677888877654444444333 9999999999999999998885 2211 11 011244788
Q ss_pred EEec--cccc----CCcc-eeEEEecHHHHHhchh----------------------------------------hhhH-
Q psy11784 156 ITVG--KPMG----NGMP-IGAVITSRKIAESLNC----------------------------------------LDDN- 187 (284)
Q Consensus 156 v~~s--K~l~----~G~p-~gav~~~~~i~~~~~~----------------------------------------l~~~- 187 (284)
++++ |.++ +|.| +|.+.+++++...+.+ +.++
T Consensus 698 ~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Yi~~lG~eLk~aa 777 (954)
T PRK12566 698 SHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMYIAMMGPQLADAS 777 (954)
T ss_pred EEecCCcccCcCccCCCCccchhhhhhhhhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHHHHHHCHHHHHHH
Confidence 8776 9885 3444 6665666644333221 1122
Q ss_pred ---HHHHHHHHHHHHhc-----cC---c-ee--EEEEe--c--ccHHHHHHHHHHHHCCcEEeec-CCCCCEEEEEcCCC
Q psy11784 188 ---RPSGKYLVRPLGIN-----LH---I-FW--CLILL--S--ITYYLYRYTRRMKEAKIIVANE-GEYGNVLLFLPAMC 248 (284)
Q Consensus 188 ---~~~~~~l~~~L~~~-----~G---~-~~--~i~~~--~--~~~~~~~~~~~l~~~Gv~~~~~-~~~~~~lr~~p~l~ 248 (284)
..+..|+.++|.+. .+ . +. .+.+. + .......+.++|++.|+..... -+..+.+|+.|.-.
T Consensus 778 ~~ailnAnYla~rL~~~~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~d~Gihapt~~fPv~~~LmIepTE~ 857 (954)
T PRK12566 778 EVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSFPVPGTLMVEPTES 857 (954)
T ss_pred HHHHHHHHHHHHHhHhhCCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHHHCCcEEeEEeeccCCEEEEEeeee
Confidence 33666888888654 11 1 11 12221 1 1134577999999999876532 12367899999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHhh
Q psy11784 249 LTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.|++|||++++.+.++.+++.+
T Consensus 858 eskeEIDrf~eAL~~I~~e~~~ 879 (954)
T PRK12566 858 ESKAELDRFVEAMLSIRAEIGK 879 (954)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988653
No 276
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=98.97 E-value=6.8e-08 Score=89.46 Aligned_cols=175 Identities=14% Similarity=0.137 Sum_probs=110.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||++.. +.. .....-.|+
T Consensus 128 ~e~l~~~i~---~~tklV~lesP~NPtG~v~d----l~~I~~la~~~gi~vIvDea~~~~~~~--------~pl~~GaDi 192 (388)
T PRK08861 128 AAALDAALA---KKPKLILLETPSNPLVRVVD----IAELCQKAKAVGALVAVDNTFLTPVLQ--------KPLELGADF 192 (388)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCccccccC--------CCcccCCCE
Confidence 455666554 46789999977777888777 88999999999999999999962 211 112234677
Q ss_pred EE--ecccccC-C-cceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 156 IT--VGKPMGN-G-MPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 156 v~--~sK~l~~-G-~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
++ +.|.++| + .-.|+++++ +++.+.+.. +++-.+.+..+.+.|+..
T Consensus 193 vv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~ 272 (388)
T PRK08861 193 VIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSYMTLRGIRTLGARMRVHEESAQQILAYLQTQSL 272 (388)
T ss_pred EEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 75 4599986 2 456777664 555554432 334445555555555543
Q ss_pred ------------------------cCceeEEEEecccHHHHHHHHHHH--HCCcEE--------eec-------------
Q psy11784 202 ------------------------LHIFWCLILLSITYYLYRYTRRMK--EAKIIV--------ANE------------- 234 (284)
Q Consensus 202 ------------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv~~--------~~~------------- 234 (284)
.|.++.+++....+.+.+|++.|. ..+.-+ .|.
T Consensus 273 v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~ 352 (388)
T PRK08861 273 VGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALA 352 (388)
T ss_pred eeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHH
Confidence 567888998533344556666544 222111 110
Q ss_pred --CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 235 --GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 235 --~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
+...+.||++.-+ |+++.+++-|+++++.+.+
T Consensus 353 ~~gi~~~liRlsvGl----E~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 353 EAGVSQQLLRLSVGL----EDAQDLIADLDQAFAKAAE 386 (388)
T ss_pred hcCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHHHh
Confidence 0123578885433 6788888888888887654
No 277
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=98.97 E-value=4.8e-08 Score=90.93 Aligned_cols=174 Identities=13% Similarity=0.130 Sum_probs=110.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||+|..+ -... .. ....|++
T Consensus 140 ~e~l~~ai~---~~tklV~lesp~NptG~v~d----l~~I~~la~~~gi~lvvD~a~a~~-~~~~-~~-----~~gaDiv 205 (398)
T PRK07504 140 LDNWEKAVR---PNTKVFFLESPTNPTLEVID----IAAVAKIANQAGAKLVVDNVFATP-LFQK-PL-----ELGAHIV 205 (398)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCcEecC----HHHHHHHHHHcCCEEEEECCcccc-ccCC-ch-----hhCCCEE
Confidence 456666654 56889999998888888777 999999999999999999999722 1111 11 1235776
Q ss_pred E--ecccccC-Cccee-EEEecHHHHHh-chh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGN-GMPIG-AVITSRKIAES-LNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~-G~p~g-av~~~~~i~~~-~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ ++|.+++ |.++| +++++++.+.. +.. +++..++..++.+.|++.
T Consensus 206 v~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v 285 (398)
T PRK07504 206 VYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSPFNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKV 285 (398)
T ss_pred EeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 5 5799986 67775 56666665432 221 334556666666666653
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHHHCCc----------EEeec--------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMKEAKI----------IVANE-------------- 234 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv----------~~~~~-------------- 234 (284)
.|.|+.+++....+.+.+|++.|.=-.+ +..|.
T Consensus 286 ~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~ 365 (398)
T PRK07504 286 ARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAE 365 (398)
T ss_pred cEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHh
Confidence 3778899985333445566665542111 11111
Q ss_pred -CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 235 -GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 235 -~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+...+.+||+.-+ |+.+.+++-|+++|+.+
T Consensus 366 ~gi~~~liR~svGl----E~~~dl~~dl~~al~~~ 396 (398)
T PRK07504 366 LGISEGFLRLSAGL----EDTDDLIEDLAAALKKV 396 (398)
T ss_pred cCCCCCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 1123568885433 56777777787777654
No 278
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=98.97 E-value=8.7e-09 Score=83.12 Aligned_cols=79 Identities=23% Similarity=0.333 Sum_probs=61.7
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCC
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNG 165 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G 165 (284)
..+++++++++..+..|...+ +++|.++|+++|+++|+||++.++..... . .......+|+++.| |.+++
T Consensus 90 ~~~~~~v~~~~~~~~~g~~~~----~~~l~~~~~~~~~~li~D~a~~~~~~~~~-~--~~~~~~~~d~~~~s~~K~~~~- 161 (170)
T cd01494 90 KPNVALIVITPNTTSGGVLVP----LKEIRKIAKEYGILLLVDAASAGGASPAP-G--VLIPEGGADVVTFSLHKNLGG- 161 (170)
T ss_pred cCceEEEEEecCcCCCCeEcC----HHHHHHHHHHcCCEEEEeccccccccccc-c--cccccccCCEEEEEcccccCC-
Confidence 456999999999998887776 59999999999999999999997754332 1 12223458999887 99987
Q ss_pred cceeEEEec
Q psy11784 166 MPIGAVITS 174 (284)
Q Consensus 166 ~p~gav~~~ 174 (284)
.+.|+++++
T Consensus 162 ~~~G~l~~~ 170 (170)
T cd01494 162 EGGGVVIVK 170 (170)
T ss_pred CceEEEEeC
Confidence 677877754
No 279
>PRK09028 cystathionine beta-lyase; Provisional
Probab=98.95 E-value=1.2e-07 Score=87.83 Aligned_cols=173 Identities=14% Similarity=0.101 Sum_probs=109.7
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT 157 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~ 157 (284)
+.+++.+. +++.+|++|...+..|.+.+ +++|.++|++||+++|+||+|+. + ..+.....-.|+++
T Consensus 137 e~l~~~l~---~~TklV~lespsNPtg~v~d----l~~I~~la~~~g~~lvvD~t~a~----p---~~~~Pl~~GaDivv 202 (394)
T PRK09028 137 EGIRELIR---PNTKVLFLESPGSITMEVQD----VPTLSRIAHEHDIVVMLDNTWAS----P---INSRPFEMGVDISI 202 (394)
T ss_pred HHHHHhcC---cCceEEEEECCCCCCCcHHH----HHHHHHHHHHcCCEEEEECCccc----c---ccCCccccCceEEE
Confidence 45666554 46889999998887776655 99999999999999999999962 2 12222334578875
Q ss_pred --ecccccC-C-cceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 158 --VGKPMGN-G-MPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 158 --~sK~l~~-G-~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
..|.++| | .-.|+++.++++.+.+.. +++..++...+.+.|++.
T Consensus 203 ~S~tK~l~Gh~d~~~G~~~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~ 282 (394)
T PRK09028 203 QAATKYIVGHSDVMLGTATANEKHWDQLREHSYLMGQCTSPDDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDH 282 (394)
T ss_pred EeCCeEecCCCCEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccE
Confidence 5699987 3 556777767766554432 335555666666666654
Q ss_pred ---------------------cCceeEEEEe-cccHHHHHHHHHHH--HCCc--------EEeec-----------CCCC
Q psy11784 202 ---------------------LHIFWCLILL-SITYYLYRYTRRMK--EAKI--------IVANE-----------GEYG 238 (284)
Q Consensus 202 ---------------------~G~~~~i~~~-~~~~~~~~~~~~l~--~~Gv--------~~~~~-----------~~~~ 238 (284)
.|.|+.+++. .+.+.+.+|++.|. ..+. +..|. +..+
T Consensus 283 V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~ 362 (394)
T PRK09028 283 VRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSK 362 (394)
T ss_pred EECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcceEecccCCCcceeECCCCcCccCchhhhcCCC
Confidence 4678899985 23345566776654 2121 11111 0123
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+.|||+.-+ |+.+.+++-|+++++.+
T Consensus 363 ~liR~svGl----Ed~~dLi~Dl~~Al~~~ 388 (394)
T PRK09028 363 PLIRLHIGL----EDVDDLIADLEAGFERY 388 (394)
T ss_pred CeEEEEeCc----CCHHHHHHHHHHHHHHH
Confidence 568885444 56677777777776654
No 280
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=98.93 E-value=1.1e-07 Score=88.14 Aligned_cols=175 Identities=15% Similarity=0.160 Sum_probs=109.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||+|.... ... ......|++
T Consensus 127 ~e~l~~~l~---~~tklV~l~sP~NPtG~v~d----i~~I~~ia~~~g~~vivDeay~~~~-~~~------pl~~gaDiv 192 (386)
T PRK08045 127 EQALRAALA---EKPKLVLVESPSNPLLRVVD----IAKICHLAREAGAVSVVDNTFLSPA-LQN------PLALGADLV 192 (386)
T ss_pred HHHHHHhcc---cCCeEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCccc-cCC------chhhCCCEE
Confidence 455666654 35788899987777887776 8999999999999999999986331 111 112234776
Q ss_pred --EecccccC--CcceeEEEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 --TVGKPMGN--GMPIGAVIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 --~~sK~l~~--G~p~gav~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++| +...|++++ ++++.+.+.. +++..++...+.+.|++.
T Consensus 193 v~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~v 272 (386)
T PRK08045 193 LHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLV 272 (386)
T ss_pred EeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhhhccHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 46799985 356787776 4666554432 234445555555555543
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHHH--CCc--------EEeec--------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMKE--AKI--------IVANE-------------- 234 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~~--~Gv--------~~~~~-------------- 234 (284)
.|.|+.+++....+.+.+|++.|.= .+. +..|.
T Consensus 273 ~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 352 (386)
T PRK08045 273 KKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAA 352 (386)
T ss_pred eEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHh
Confidence 4678888885333445667666542 121 11111
Q ss_pred -CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 235 -GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 235 -~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+...+.||++.-+ |+.+.+++-|+++++...
T Consensus 353 ~gi~~~liR~svGl----E~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 353 AGISETLLRISTGI----EDGEDLIADLENGFRAAN 384 (386)
T ss_pred cCCCCCeEEEEeCc----CCHHHHHHHHHHHHHHhh
Confidence 0123578885443 567777777777776543
No 281
>PRK07050 cystathionine beta-lyase; Provisional
Probab=98.91 E-value=1.8e-07 Score=87.00 Aligned_cols=172 Identities=15% Similarity=0.130 Sum_probs=105.5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE-
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII- 156 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv- 156 (284)
+.+++.+. +++.+|++|...+..| +...+++|.++|+++|+++|+|++|+. |. .+.-...| .|++
T Consensus 141 ~~l~~~i~---~~tklV~le~p~Np~~----~~~di~~I~~ia~~~gi~livD~a~a~----~~-~~~~l~~G--aDi~v 206 (394)
T PRK07050 141 AGIADLIQ---PNTRLIWLEAPGSVTM----EVPDVPAITAAARARGVVTAIDNTYSA----GL-AFKPFEHG--VDISV 206 (394)
T ss_pred HHHHHhcC---CCCeEEEEECCCCCCc----cHhhHHHHHHHHHHcCCEEEEECCccc----cc-ccCHHHcC--CeEEE
Confidence 44566554 4578899997655544 455599999999999999999999862 11 11111123 4766
Q ss_pred -EecccccCC--cceeEEEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----
Q psy11784 157 -TVGKPMGNG--MPIGAVIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---- 201 (284)
Q Consensus 157 -~~sK~l~~G--~p~gav~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---- 201 (284)
.++|.++|| .+.|++++ ++++++.+.. +++..+++.++.+.|++.
T Consensus 207 ~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 207 QALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVSADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred EECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 578999864 57887777 5667665543 234444455555655543
Q ss_pred ----------------------cCceeEEEEec--ccHHHHHHHHHHHHCCcEEeecC-------------------CCC
Q psy11784 202 ----------------------LHIFWCLILLS--ITYYLYRYTRRMKEAKIIVANEG-------------------EYG 238 (284)
Q Consensus 202 ----------------------~G~~~~i~~~~--~~~~~~~~~~~l~~~Gv~~~~~~-------------------~~~ 238 (284)
.|.++.+++.. ......++.+.|...++-+.-++ ..+
T Consensus 287 ~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~ 366 (394)
T PRK07050 287 TVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRG 366 (394)
T ss_pred EEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCC
Confidence 35566677743 23556778777776554332111 112
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.|||+.-+ |+.+.+++-|+++++.
T Consensus 367 ~~iR~svGl----E~~~dl~~dl~~al~~ 391 (394)
T PRK07050 367 TLVRLYIGL----EDEADLIADLEQALEA 391 (394)
T ss_pred CEEEEEeCc----CCHHHHHHHHHHHHHH
Confidence 567875444 5666667777666654
No 282
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=98.90 E-value=1.4e-07 Score=87.41 Aligned_cols=92 Identities=21% Similarity=0.222 Sum_probs=64.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|...+ +++|.++|+++|+++|+||+|..+ .... . .....|++
T Consensus 126 ~~~l~~ai~---~~tklV~l~~p~NPtG~~~d----l~~I~~la~~~g~~vvvD~a~~~~-~~~~-p-----l~~gaDiv 191 (382)
T TIGR02080 126 EQALRAALA---QKPKLVLIETPSNPLLRVVD----IAKICHLAKAVGAVVVVDNTFLSP-ALQN-P-----LALGADLV 191 (382)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCccc-ccCC-c-----hhhCCCEE
Confidence 456666664 45788999977777887776 899999999999999999999632 1111 1 11234766
Q ss_pred --EecccccC--CcceeEEEe-cHHHHHhch
Q psy11784 157 --TVGKPMGN--GMPIGAVIT-SRKIAESLN 182 (284)
Q Consensus 157 --~~sK~l~~--G~p~gav~~-~~~i~~~~~ 182 (284)
+++|.++| ++..|++++ ++++.+.+.
T Consensus 192 v~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~ 222 (382)
T TIGR02080 192 LHSCTKYLNGHSDVIAGAVIAKDPQVAEELA 222 (382)
T ss_pred EeecceeccCCCCceeEEEEeCCHHHHHHHH
Confidence 56799975 367788776 566655443
No 283
>PRK07503 methionine gamma-lyase; Provisional
Probab=98.90 E-value=1.7e-07 Score=87.37 Aligned_cols=92 Identities=17% Similarity=0.272 Sum_probs=67.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|...+ +++|.++|++||+++|+|++|... ..+. . .+...|++
T Consensus 140 ~~~l~~~i~---~~tklV~le~p~NPtG~~~d----i~~I~~la~~~gi~lIvD~a~a~~-~~~~-~-----l~~g~Di~ 205 (403)
T PRK07503 140 PAALKAAIS---DKTRMVYFETPANPNMRLVD----IAAVAEIAHGAGAKVVVDNTYCTP-YLQR-P-----LELGADLV 205 (403)
T ss_pred HHHHHHhcC---ccCcEEEEeCCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCccc-ccCC-c-----hhhCCCEE
Confidence 456666664 45788999987777887776 999999999999999999999632 2222 1 12345776
Q ss_pred E--ecccccC-C-cceeEEEecHHHHHhch
Q psy11784 157 T--VGKPMGN-G-MPIGAVITSRKIAESLN 182 (284)
Q Consensus 157 ~--~sK~l~~-G-~p~gav~~~~~i~~~~~ 182 (284)
+ ++|.+++ | ...|+++.++++++.+.
T Consensus 206 v~S~tK~l~g~gd~~gG~v~~~~~l~~~l~ 235 (403)
T PRK07503 206 VHSATKYLGGHGDITAGLVVGGKALADRIR 235 (403)
T ss_pred EccccccccCCCceeEEEEEcCHHHHHHHH
Confidence 4 6799987 4 66788888888876654
No 284
>PRK06234 methionine gamma-lyase; Provisional
Probab=98.89 E-value=1.1e-07 Score=88.64 Aligned_cols=174 Identities=14% Similarity=0.111 Sum_probs=114.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+. +++.+|++|...+..|.+.+ +++|.++|+++ |+++|+||++... ..+. . .+...|
T Consensus 139 ~e~l~~~i~---~~tklI~iesP~NPtG~v~d----l~~I~~la~~~~~~i~livDea~~~~-~~~~-~-----l~~g~D 204 (400)
T PRK06234 139 LEEVRNALK---ANTKVVYLETPANPTLKVTD----IKAISNIAHENNKECLVFVDNTFCTP-YIQR-P-----LQLGAD 204 (400)
T ss_pred HHHHHHHhc---cCCeEEEEECCCCCCCCcCC----HHHHHHHHHhcCCCCEEEEECCCCch-hcCC-c-----hhhCCc
Confidence 466666664 45789999988888888776 99999999997 9999999998632 1222 1 122467
Q ss_pred EE--EecccccC-Ccce-eEEEecHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 155 II--TVGKPMGN-GMPI-GAVITSRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 155 iv--~~sK~l~~-G~p~-gav~~~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
++ +++|.+++ |.++ |++++++++++.+.. +++..++.+++.+.|++.
T Consensus 205 ivv~S~sK~l~g~g~~~gG~v~~~~~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~ 284 (400)
T PRK06234 205 VVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESH 284 (400)
T ss_pred EEEeeccccccCCCCceeEEEEecHHHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcC
Confidence 66 46799986 5554 888889888776542 335555666666666653
Q ss_pred --------------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC--------------------
Q psy11784 202 --------------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------------------- 235 (284)
Q Consensus 202 --------------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------------------- 235 (284)
.|.++.+++....+.+.+|.+.|.--++-..-++
T Consensus 285 ~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~ 364 (400)
T PRK06234 285 PAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEE 364 (400)
T ss_pred CCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHH
Confidence 4668888885333456677777664433222111
Q ss_pred -----CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 236 -----EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 236 -----~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
...+.+||+.-+ |+.+.+++-|+++++.+
T Consensus 365 ~~~~gi~~~l~R~svGl----E~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 365 RKEAGISDGLVRLSVGL----EDVDDIIADLKQALDLI 398 (400)
T ss_pred HHhcCCCCCeEEEEeCC----CCHHHHHHHHHHHHHHH
Confidence 123578885444 56777777777777653
No 285
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=98.89 E-value=2e-07 Score=85.80 Aligned_cols=171 Identities=15% Similarity=0.170 Sum_probs=107.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.+.+++.++ +++.+|++|...+..| +...+++|.++|++||+++|+||++. ++ .+. ......|+
T Consensus 126 ~~~l~~~i~---~~tklv~le~P~NP~~----~~~dl~~I~~la~~~g~~lIvD~t~~~~~--~~~------p~~~g~di 190 (366)
T PRK08247 126 LKAIEQAIT---PNTKAIFIETPTNPLM----QETDIAAIAKIAKKHGLLLIVDNTFYTPV--LQR------PLEEGADI 190 (366)
T ss_pred HHHHHHhcc---cCceEEEEECCCCCCC----cHHHHHHHHHHHHHcCCEEEEECCCcccc--ccC------chhcCCcE
Confidence 566777664 4578899986655433 44559999999999999999999984 22 111 11123466
Q ss_pred E--EecccccC--CcceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 156 I--TVGKPMGN--GMPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 156 v--~~sK~l~~--G~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+ +++|.++| +...|+++++ +++.+.+.. +++.+++.+.+.+.|++.
T Consensus 191 ~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~tl~~r~~~~~~~a~~l~~~L~~~p~ 270 (366)
T PRK08247 191 VIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRGMKTLALRMRQHEENAKAIAAFLNEQPG 270 (366)
T ss_pred EEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 5 57899986 3567888876 566555432 235566777777777764
Q ss_pred --------cCceeEEEEecccHHHHHHHHHHH----------HCCcEEeecC---------------CCCCEEEEEcCCC
Q psy11784 202 --------LHIFWCLILLSITYYLYRYTRRMK----------EAKIIVANEG---------------EYGNVLLFLPAMC 248 (284)
Q Consensus 202 --------~G~~~~i~~~~~~~~~~~~~~~l~----------~~Gv~~~~~~---------------~~~~~lr~~p~l~ 248 (284)
.|.|+.+++. ..+...+|.+.+. .+.+++.|.. ...+.+||+.-+
T Consensus 271 v~~v~~P~~gg~~sf~~~-~~~~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGl- 348 (366)
T PRK08247 271 VTDVLYPGRGGMLSFRLQ-DEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGI- 348 (366)
T ss_pred eeEEecCCcCcEEEEEEC-CHHHHHHHHHcCCcceEccCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEecc-
Confidence 4677788774 2233344444322 1234444431 123578885433
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy11784 249 LTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 249 ~t~~~id~~~~~l~~~l~~ 267 (284)
|+++.+++-|+++++.
T Consensus 349 ---E~~~dl~~dl~~al~~ 364 (366)
T PRK08247 349 ---ENVEDLIADLKQAFKQ 364 (366)
T ss_pred ---CCHHHHHHHHHHHHhh
Confidence 6677778888777764
No 286
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.88 E-value=1.8e-07 Score=86.70 Aligned_cols=174 Identities=16% Similarity=0.157 Sum_probs=114.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC--CEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG--GVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g--~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.++ +++..|++|.+.+..|.+.+ +++|.++|+++| +++|+|.+++ +|. + ++....-.|
T Consensus 137 ~~~l~~~l~---~~TrlV~~EtpsNp~~~v~D----I~~Ia~ia~~~g~g~~lvVDnT~a----~p~--~-~~pl~~GaD 202 (395)
T PRK08114 137 GADIAKLIQ---PNTKVVFLESPGSITMEVHD----VPAIVAAVRSVNPDAVIMIDNTWA----AGV--L-FKALDFGID 202 (395)
T ss_pred HHHHHHhcC---CCceEEEEECCCCCCCEeec----HHHHHHHHHHhCCCCEEEEECCCc----ccc--c-cCHHHcCCc
Confidence 456777665 45889999999999999998 999999999985 9999999886 222 2 444445688
Q ss_pred EEEe--cccccCC--cceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--
Q psy11784 155 IITV--GKPMGNG--MPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-- 201 (284)
Q Consensus 155 iv~~--sK~l~~G--~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-- 201 (284)
+++. .|.++|. .-.|+++.+++..+.+.. +++-.+++..+.+.|++.
T Consensus 203 ivv~S~tKyl~Ghsdv~~G~v~~~~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~ 282 (395)
T PRK08114 203 ISIQAGTKYLVGHSDAMIGTAVANARCWEQLRENSYLMGQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPE 282 (395)
T ss_pred EEEEcCcccccCCCcceeEEEEcCHHHHHHHHHHHHhccCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 8865 4999873 567777777766554432 335555666666666643
Q ss_pred ------------------------cCceeEEEEec--ccHHHHHHHHHHHH--CCc--------EEe--e----------
Q psy11784 202 ------------------------LHIFWCLILLS--ITYYLYRYTRRMKE--AKI--------IVA--N---------- 233 (284)
Q Consensus 202 ------------------------~G~~~~i~~~~--~~~~~~~~~~~l~~--~Gv--------~~~--~---------- 233 (284)
.|.|+.+++.. ..+.+.+|++.|.= .++ +.. |
T Consensus 283 V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~ 362 (395)
T PRK08114 283 VARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAG 362 (395)
T ss_pred EeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcccHHHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChh
Confidence 46788898853 23445566665431 111 110 0
Q ss_pred -cCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 234 -EGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 234 -~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+..++.||++.- -|+++.+++-|+++++.+
T Consensus 363 ~~~~~~~liRlSvG----lEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 363 EVDFTGTLIRLHIG----LEDVDDLIADLAAGFARI 394 (395)
T ss_pred HhcCCCCeEEEEec----cCCHHHHHHHHHHHHHhh
Confidence 0012367888543 367788888888877643
No 287
>PRK05968 hypothetical protein; Provisional
Probab=98.88 E-value=2e-07 Score=86.48 Aligned_cols=171 Identities=13% Similarity=0.098 Sum_probs=106.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. ++.+|++|...+..+ +...+++|.++|++||+++|+|+++... -... .. ..| .|++
T Consensus 138 ~~~l~~~i~----~tklV~ie~pt~~~~----~~~dl~~i~~la~~~gi~vivD~a~a~~-~~~~-p~---~~g--~Div 202 (389)
T PRK05968 138 EEAVAKALP----GAKLLYLESPTSWVF----ELQDVAALAALAKRHGVVTMIDNSWASP-VFQR-PI---TLG--VDLV 202 (389)
T ss_pred HHHHHHhcc----cCCEEEEECCCCCCC----cHHHHHHHHHHHHHcCCEEEEECCCcch-hccC-ch---hcC--CcEE
Confidence 455666552 456788886555433 4455999999999999999999998632 1111 11 123 4666
Q ss_pred --EecccccC-C-cceeEEEecHHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 --TVGKPMGN-G-MPIGAVITSRKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 --~~sK~l~~-G-~p~gav~~~~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+++|.++| | ...|++++++++++.+.. +++-.++.+++.+.|++.
T Consensus 203 v~S~tK~l~g~~~~~gG~i~~~~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v 282 (389)
T PRK05968 203 IHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPYLGAKLSPFEAWLLLRGLRTLPLRMKAHEASALEIARRLKAHPVV 282 (389)
T ss_pred EeeccccccCCCCeEEEEEEECHHHHHHHHHHHHHhCCCCCChHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 46799986 3 456777888887765442 334455567777777764
Q ss_pred -----c-------------CceeEEEEecccHHHHHHHHHHHHCCcEEeecCC-------------------------CC
Q psy11784 202 -----L-------------HIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE-------------------------YG 238 (284)
Q Consensus 202 -----~-------------G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-------------------------~~ 238 (284)
- |.++.+++. ......+|++.|...++.+.-++. ..
T Consensus 283 ~~v~~p~l~~~~~~~~~g~g~~~sf~~~-~~~~~~~f~~~L~~~~~~~s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~ 361 (389)
T PRK05968 283 ERVCHPALANHPPAGLSGTSGLFSFIFR-EGIDVRAFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNSAARFGVSP 361 (389)
T ss_pred cEEECCCCCCChHHhCCCCceEEEEEEC-CHHHHHHHHHhCCccEEecCCCCCCceeeeCcccccccCCHHHHHhcCCCC
Confidence 1 346677774 234567888888765543322110 13
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.+|++.-+- +.+.+++-|+++++.
T Consensus 362 ~liR~SvGlE----~~~dl~~dl~~al~~ 386 (389)
T PRK05968 362 RSVRLHVGLE----GTEALWADLEQALAA 386 (389)
T ss_pred CeEEEEeccC----CHHHHHHHHHHHHHH
Confidence 5788876664 455555666666554
No 288
>PLN02880 tyrosine decarboxylase
Probab=98.88 E-value=5.1e-07 Score=86.14 Aligned_cols=189 Identities=13% Similarity=0.019 Sum_probs=115.5
Q ss_pred HHHHHHHHHhc---CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH---RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.+.|++.|++. +..+.+|+..---...|.+-| +++|.++|++||+++.+|=++.|+-..-. .+-....|+ .
T Consensus 223 ~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp----l~eI~~i~~~~~iwlHVDaA~gg~~~~~~-~~~~~l~gie~ 297 (490)
T PLN02880 223 PELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP----LLELGKIAKSNGMWFHVDAAYAGSACICP-EYRHYIDGVEE 297 (490)
T ss_pred HHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc----HHHHHHHHHHcCCEEEEehhhHHHHHhCH-HHHHHhcCchh
Confidence 67788887632 222555665554455677777 99999999999999999988876422111 111122454 5
Q ss_pred CcEEEe--cccccCCcceeEEEecHHH--HHhc-------h------------------------h--------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRKI--AESL-------N------------------------C-------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~i--~~~~-------~------------------------~-------------- 183 (284)
.|.+++ -|.+...++.|+++.++.- .+.+ . .
T Consensus 298 aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g 377 (490)
T PLN02880 298 ADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVEN 377 (490)
T ss_pred cCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHH
Confidence 788776 4999877888999886421 1100 0 0
Q ss_pred ----hhhHHHHHHHHHHHHHhccC---------ceeEEEEecc-------cHHHHHHHHHHHHCCcEE-eecC-CCCCEE
Q psy11784 184 ----LDDNRPSGKYLVRPLGINLH---------IFWCLILLSI-------TYYLYRYTRRMKEAKIIV-ANEG-EYGNVL 241 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~~G---------~~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~-~~~~-~~~~~l 241 (284)
+++.-++.+++.+.|++..+ .++.+.+.+. .....++.++|.+.|-+. .... .+...+
T Consensus 378 ~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~l 457 (490)
T PLN02880 378 LQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVL 457 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEE
Confidence 12333677777777765411 1233333321 112345666777665444 3321 233588
Q ss_pred EEEcCCCC-CHHHHHHHHHHHHHHHHHHhh
Q psy11784 242 LFLPAMCL-TTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 242 r~~p~l~~-t~~~id~~~~~l~~~l~~~~~ 270 (284)
|+++.... |++|++.+++.+.+..+++..
T Consensus 458 R~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 458 RFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99874444 569999999999998887643
No 289
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.88 E-value=1.3e-07 Score=82.21 Aligned_cols=176 Identities=14% Similarity=0.070 Sum_probs=115.2
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE-Ee--cccccCC
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII-TV--GKPMGNG 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv-~~--sK~l~~G 165 (284)
+.+++|++.---...|. +.+.+-+.+|-+|+++||++||+|.+|. .-.-|- .|.-...--.++|+ |+ ||.==-|
T Consensus 178 e~~g~ic~SRPtNPTGN-VlTdeE~~kldalA~~~giPliIDnAYg-~PFP~i-ifsd~~~~w~~NiilC~SLSK~GLPG 254 (417)
T COG3977 178 ESTGAICVSRPTNPTGN-VLTDEELAKLDALARQHGIPLIIDNAYG-VPFPGI-IFSDATPLWNENIILCMSLSKLGLPG 254 (417)
T ss_pred cccceEEecCCCCCCCC-cccHHHHHHHHHHhhhcCCcEEEecccC-CCCCce-ecccccccCCCCEEEEeehhhcCCCC
Confidence 45888888743333454 5689999999999999999999999985 212221 11110111124443 44 5543347
Q ss_pred cceeEEEecHHHHHhchh--------------------------------------hhhHHHHHHHHHHHHHhc------
Q psy11784 166 MPIGAVITSRKIAESLNC--------------------------------------LDDNRPSGKYLVRPLGIN------ 201 (284)
Q Consensus 166 ~p~gav~~~~~i~~~~~~--------------------------------------l~~~~~~~~~l~~~L~~~------ 201 (284)
.++|.++++++++..+.. .++++..-..+++.|-+.
T Consensus 255 ~R~GIiIane~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp~~~~~iHk 334 (417)
T COG3977 255 SRCGIIIANEKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLPEYRCLIHK 334 (417)
T ss_pred cceeEEEccHHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhHHHHHHHHHHHHHHHHhcCccceeeec
Confidence 789999999999988765 113333333344433332
Q ss_pred -cCc-eeEEEEecccHHHHHHHHHHHHCCcEEeecCC-----------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 202 -LHI-FWCLILLSITYYLYRYTRRMKEAKIIVANEGE-----------YGNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 202 -~G~-~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~-----------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.|. +.++-+..-.-...+++++|+++||++.|+.. ....+|+ +++-+++.|+..+.+|.+.+++.
T Consensus 335 pEGAIFlWLWf~dLPItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rm--n~~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 335 PEGAIFLWLWFKDLPITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRM--NYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred CCcceeehhhhccCCCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEE--ecCCCHHHHHHHHHHHHHHHHHH
Confidence 233 33443432234578999999999999998743 1247888 68889999999999999888765
Q ss_pred h
Q psy11784 269 Q 269 (284)
Q Consensus 269 ~ 269 (284)
-
T Consensus 413 y 413 (417)
T COG3977 413 Y 413 (417)
T ss_pred H
Confidence 3
No 290
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=98.87 E-value=6.9e-08 Score=90.46 Aligned_cols=192 Identities=12% Similarity=0.063 Sum_probs=115.9
Q ss_pred HHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC----------ccccCcccc
Q psy11784 77 AQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM----------GRSGSHFWA 145 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~----------gr~G~~~~a 145 (284)
.+.|++.+... ...+++|+++--....|..+.+.+.+++|+++|++||++||.|+++.-. |..+.....
T Consensus 138 ~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e 217 (431)
T cd00617 138 VAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE 217 (431)
T ss_pred HHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH
Confidence 68888888743 2348888888444434446779999999999999999999999997511 111110000
Q ss_pred cc-ccCCCCcEEEec--ccccCCcce-eEEEecH-HHHHhchh-------------------------h---------hh
Q psy11784 146 FQ-TQGAVPDIITVG--KPMGNGMPI-GAVITSR-KIAESLNC-------------------------L---------DD 186 (284)
Q Consensus 146 ~~-~~g~~pDiv~~s--K~l~~G~p~-gav~~~~-~i~~~~~~-------------------------l---------~~ 186 (284)
.. ..+---|..++| |..+ .|+ |++++++ ++++.+.. + +.
T Consensus 218 i~~e~~s~sd~~~mS~~K~~~--~~~GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~~~~l~~ 295 (431)
T cd00617 218 IAREMFSYADGCTMSAKKDGL--VNIGGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVEEDYLRH 295 (431)
T ss_pred HHHHhhccCCEEEEEeecCCC--CccceEEEeCcHHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhcccHHHHHH
Confidence 00 001124444444 3322 233 4777775 57766542 1 11
Q ss_pred HHHHHHHHHHHHHhc--------cCceeEEEEe---c----ccHHHHHHHHHHH-HCCcEEeecCC--------------
Q psy11784 187 NRPSGKYLVRPLGIN--------LHIFWCLILL---S----ITYYLYRYTRRMK-EAKIIVANEGE-------------- 236 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~--------~G~~~~i~~~---~----~~~~~~~~~~~l~-~~Gv~~~~~~~-------------- 236 (284)
..++.++|.+.|++. .|.++.++.. + ..-.+..++.+|+ +.||.+...+.
T Consensus 296 ~~~~r~~l~~~L~~~G~~v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~ 375 (431)
T cd00617 296 RVEQVRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKY 375 (431)
T ss_pred HHHHHHHHHHHHHHCCCCccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccC
Confidence 122335566666654 3445555543 1 1113677886666 56888653211
Q ss_pred -CCCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 237 -YGNVLLFLPAM-CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 237 -~~~~lr~~p~l-~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
.-+.+|+..|- ..|.+++|.+.+.+..+.++-..
T Consensus 376 ~~~~~~rl~~prr~~t~~~~~~~~~~~~~~~~~~~~ 411 (431)
T cd00617 376 PELELVRLAIPRRVYTQDHMDYVAAAVIALYERRED 411 (431)
T ss_pred CccceeEEeccccccCHHHHHHHHHHHHHHHhhHhh
Confidence 12578998886 67999999999999999887554
No 291
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=98.86 E-value=2.7e-07 Score=86.11 Aligned_cols=91 Identities=12% Similarity=0.154 Sum_probs=62.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|.+.. +++|.++|++||+++|+||+|..-...- .+ ....|++
T Consensus 135 ~~~l~~~i~---~~tklV~l~~P~NPtG~v~d----l~~I~~la~~~gi~vIvD~a~a~~~~~~--pl-----~~gaDiv 200 (405)
T PRK08776 135 PRSLADALA---QSPKLVLIETPSNPLLRITD----LRFVIEAAHKVGALTVVDNTFLSPALQK--PL-----EFGADLV 200 (405)
T ss_pred HHHHHHhcC---cCCeEEEEECCCCCCCccCC----HHHHHHHHHHcCCEEEEECCCcccccCC--cc-----cccCCEE
Confidence 456666664 35778888877777787655 9999999999999999999996321111 11 1235777
Q ss_pred Ee--cccccC--CcceeEEEe-cHHHHHhc
Q psy11784 157 TV--GKPMGN--GMPIGAVIT-SRKIAESL 181 (284)
Q Consensus 157 ~~--sK~l~~--G~p~gav~~-~~~i~~~~ 181 (284)
++ +|.++| +...|++++ ++++.+.+
T Consensus 201 v~S~tK~l~g~~~~~~G~vv~~~~~l~~~l 230 (405)
T PRK08776 201 LHSTTKYINGHSDVVGGAVVARDAELHQQL 230 (405)
T ss_pred EecCceeecCCCCceEEEEEeCCHHHHHHH
Confidence 54 599975 355677766 46665544
No 292
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=98.86 E-value=2.1e-07 Score=86.04 Aligned_cols=172 Identities=12% Similarity=0.107 Sum_probs=109.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|.+.+ +++|.++|++||+++|+|+++.. +.... ......|++
T Consensus 121 ~~~le~~i~---~~tklv~le~psnptg~v~d----l~~I~~la~~~g~~vivD~a~~~-~~~~~------~l~~g~Di~ 186 (378)
T TIGR01329 121 LDKVKAALG---PKTKLVLLESPTNPLQKIVD----IRKISEMAHAQNALVVVDNTMMS-PLLCN------PLELGADIV 186 (378)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCcc-cccCC------hhhcCCcEE
Confidence 456666664 56889999988888888777 99999999999999999999842 11111 112235877
Q ss_pred E--ecccccCC--cceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGNG--MPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~G--~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ .+|.++|. .-.|+++++ +++.+.+.. +++-.++...+.+.|++.
T Consensus 187 v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~tl~~R~e~~~~na~~la~~L~~~~~v 266 (378)
T TIGR01329 187 YHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKTLAIRIEKQQENARAIAMFLSTHPRV 266 (378)
T ss_pred EEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 5 46999863 456777774 444343322 223334444555555443
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC----------------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE---------------------- 236 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~---------------------- 236 (284)
.|.++.+++ .....+.+|+..|...++.++.++.
T Consensus 267 ~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~-~~~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~ 345 (378)
T TIGR01329 267 KKVRYAGLPSHPGFHLHFSQAKGAGSVLSFET-GSVALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREE 345 (378)
T ss_pred cEEECCCCCCCccHHHHHHhCCCcceEEEEEE-CCHHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHh
Confidence 456778888 3444477888888655554443221
Q ss_pred ---CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 237 ---YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 237 ---~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
..+.+||+.- -|+.+.+++-|+++|+.
T Consensus 346 ~gi~~~liR~svG----lE~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 346 RGLPEDLVRLSVG----IEDVDDLISDLDIAFVT 375 (378)
T ss_pred cCCCCCeEEEEec----cCCHHHHHHHHHHHHHh
Confidence 1246777433 35677777777777764
No 293
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=98.85 E-value=2.2e-07 Score=86.64 Aligned_cols=89 Identities=15% Similarity=0.197 Sum_probs=64.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.+.. +++|.++|+++|+++|+||++.. +-... .. ..| .|++
T Consensus 145 ~~~l~~ai~---~~tklV~~esp~Nptg~v~d----l~~I~~la~~~g~~vivD~a~a~-~~~~~-~~---~~g--aDiv 210 (403)
T PRK07810 145 LSQWEEALS---VPTQAVFFETPSNPMQSLVD----IAAVSELAHAAGAKVVLDNVFAT-PLLQR-GL---PLG--ADVV 210 (403)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCCc-cccCC-hh---hcC--CcEE
Confidence 566777665 45789999988888888776 99999999999999999999862 11111 11 123 5877
Q ss_pred E--ecccccC-Ccce-eEEEecHHHHH
Q psy11784 157 T--VGKPMGN-GMPI-GAVITSRKIAE 179 (284)
Q Consensus 157 ~--~sK~l~~-G~p~-gav~~~~~i~~ 179 (284)
+ ++|.++| |..+ |+++++++...
T Consensus 211 v~S~tK~l~g~g~~~gG~v~~~~~~~~ 237 (403)
T PRK07810 211 VYSGTKHIDGQGRVLGGAILGDREYID 237 (403)
T ss_pred EccCCceecCCcCceeEEEEeChHHHH
Confidence 5 5699986 5555 77777776543
No 294
>PRK08064 cystathionine beta-lyase; Provisional
Probab=98.85 E-value=4.4e-07 Score=84.28 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=62.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+||+|..+ -... . .....|++
T Consensus 128 ~~~l~~~l~---~~tklV~l~~p~NptG~~~d----l~~I~~la~~~g~~vvvD~a~~~~-~~~~---~---~~~g~Div 193 (390)
T PRK08064 128 LEEVAQNIK---PNTKLFYVETPSNPLLKVTD----IRGVVKLAKAIGCLTFVDNTFLTP-LLQK---P---LDLGADVV 193 (390)
T ss_pred HHHHHHhcC---CCceEEEEECCCCCCcEecc----HHHHHHHHHHcCCEEEEECCCCcc-cccC---c---hhhCCcEE
Confidence 456666554 45789999987777788776 999999999999999999998632 1111 1 11235776
Q ss_pred E--ecccccC--CcceeEEEe-cHHHHHhchh
Q psy11784 157 T--VGKPMGN--GMPIGAVIT-SRKIAESLNC 183 (284)
Q Consensus 157 ~--~sK~l~~--G~p~gav~~-~~~i~~~~~~ 183 (284)
+ ++|.++| |.-.|++++ ++++.+.+..
T Consensus 194 v~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~ 225 (390)
T PRK08064 194 LHSATKFLAGHSDVLAGLAVVKDEELAQKLYF 225 (390)
T ss_pred EeecceeccCCccceeEEEEeCCHHHHHHHHH
Confidence 5 5699875 223455555 4567665543
No 295
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.84 E-value=4.1e-07 Score=85.30 Aligned_cols=183 Identities=13% Similarity=0.048 Sum_probs=108.4
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc-cCccccccccCC-CC
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS-GSHFWAFQTQGA-VP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G~~~~a~~~~g~-~p 153 (284)
.++|++.|.... ..+.+|+..|-.+..|. .+-+++|.++|++||+++|+|++|...... .. . ....... ..
T Consensus 191 ~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~----~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~-~-~~~g~~~Gra 264 (444)
T TIGR03531 191 VEDIERAIEEIGPDNILCVLSTTSCFAPRS----PDDIEEIAKICANYDIPHIVNNAYGLQSNKYME-L-INKAIKVGRV 264 (444)
T ss_pred HHHHHHHHHhccCCCEEEEEEcCCcCCCcc----hhCHHHHHHHHHHcCCEEEEECcCcCcChhhhh-h-hhccccccCC
Confidence 688888887443 44777776665333233 345999999999999999999999632111 10 0 0001112 24
Q ss_pred cEEEe--cccccCCcceeEEEe-cHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHhc
Q psy11784 154 DIITV--GKPMGNGMPIGAVIT-SRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGIN 201 (284)
Q Consensus 154 Div~~--sK~l~~G~p~gav~~-~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~~ 201 (284)
|++++ .|.+.....-|++++ ++++.+.+.. +++..++.+++.+.|+++
T Consensus 265 d~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l 344 (444)
T TIGR03531 265 DAVVSSTDKNFMVPVGGAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKL 344 (444)
T ss_pred CeEEEeCccCCCCCCCEEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77765 488864212355556 5666665543 335666777788888776
Q ss_pred ---cCc----------eeEEEEec-ccHHHHHHHHHHHHCCcE----EeecC-----------CCCC-------EEEEEc
Q psy11784 202 ---LHI----------FWCLILLS-ITYYLYRYTRRMKEAKII----VANEG-----------EYGN-------VLLFLP 245 (284)
Q Consensus 202 ---~G~----------~~~i~~~~-~~~~~~~~~~~l~~~Gv~----~~~~~-----------~~~~-------~lr~~p 245 (284)
.|. -+++.+.. .......+...|+.++|- +.++. .+.+ ++-+.-
T Consensus 345 ~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~ 424 (444)
T TIGR03531 345 AERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAA 424 (444)
T ss_pred HHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHHhCCCCCceeecCCCceEECCEEeecccccccCCCchhHHHHH
Confidence 121 12333320 123466777788887662 11211 0111 444555
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q psy11784 246 AMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 246 ~l~~t~~~id~~~~~l~~~l 265 (284)
++.++++|||.++++|++++
T Consensus 425 ~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 425 AIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred HhCCcHHHHHHHHHHHhhcC
Confidence 66789999999999998763
No 296
>PRK07049 methionine gamma-lyase; Validated
Probab=98.84 E-value=1.5e-07 Score=88.26 Aligned_cols=174 Identities=10% Similarity=0.137 Sum_probs=107.0
Q ss_pred HHHHHHHHhc--CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHH------hCCEEEEecccccCccccCcccccccc
Q psy11784 78 QAARNIMEAH--RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHE------IGGVVIADEIQCGMGRSGSHFWAFQTQ 149 (284)
Q Consensus 78 ~~l~~~i~~~--~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~------~g~llI~DEv~tG~gr~G~~~~a~~~~ 149 (284)
+.+++.++.. .+++.+|++|...+..|.+.. ++++.++|++ +++++|+||++.++.... .. .+
T Consensus 160 ~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d----~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~--pl---~~ 230 (427)
T PRK07049 160 AAIGAAAEAAAAKGRVSLILIETPANPTNSLVD----VAAVRRVADAIEARQGHRPIIACDNTLLGPVFQK--PL---EH 230 (427)
T ss_pred HHHHHHHHhhccCCCceEEEEECCCCCCCcccC----HHHHHHHHHHhhhcccCCCEEEEECCccccccCC--cc---cc
Confidence 4555555421 245889999988887887665 5555555554 899999999976431111 11 12
Q ss_pred CCCCcEE--EecccccC--CcceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHH
Q psy11784 150 GAVPDII--TVGKPMGN--GMPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPL 198 (284)
Q Consensus 150 g~~pDiv--~~sK~l~~--G~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L 198 (284)
..|++ +++|.++| |+.+|++++++++++.+.. +++..++.+.+.+.|
T Consensus 231 --g~divv~S~SK~~gG~~glr~G~vv~~~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L 308 (427)
T PRK07049 231 --GADLSVYSLTKYVGGHSDLVAGAVLGRKALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFL 308 (427)
T ss_pred --CCCEEEEcCceeecCCCCcEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 24665 68899995 6999999999988776654 334555666666666
Q ss_pred Hhc----------------------------cCceeEEEEecccHHHHHHHHHHH--HCCcEE--------eec------
Q psy11784 199 GIN----------------------------LHIFWCLILLSITYYLYRYTRRMK--EAKIIV--------ANE------ 234 (284)
Q Consensus 199 ~~~----------------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv~~--------~~~------ 234 (284)
++. .|.++.+++....+.+.+|++.|. ..++-+ .|.
T Consensus 309 ~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~ 388 (427)
T PRK07049 309 RDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSG 388 (427)
T ss_pred HhCCCccEEECCCCCCCCCccHHHHHhhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCcccccc
Confidence 654 244777887533344556666554 222111 111
Q ss_pred ---------CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 235 ---------GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 235 ---------~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+...+.|||+.-+ |+++.+++-|+++|+
T Consensus 389 ~~~~~~~~~gi~~~liR~svGl----E~~~dl~~dl~~al~ 425 (427)
T PRK07049 389 VPADVRERIGVLESTIRLSIGI----EHPDDLIADLAQALD 425 (427)
T ss_pred CCHHHHHhcCCCcCeEEEEeCc----CCHHHHHHHHHHHHh
Confidence 0123567875433 667777777777765
No 297
>PRK05967 cystathionine beta-lyase; Provisional
Probab=98.83 E-value=4.2e-07 Score=84.28 Aligned_cols=173 Identities=16% Similarity=0.095 Sum_probs=106.3
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE-
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII- 156 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv- 156 (284)
+.+++.++ +++.+|++|...+..+.+. .+++|.++|+++|+++|+|+++... ..+.....-.|++
T Consensus 140 e~l~~al~---~~TklV~lesPsNP~l~v~----dl~~I~~la~~~g~~vvVD~t~a~p-------~~~~pl~~GaDivv 205 (395)
T PRK05967 140 AGIAKLMR---PNTKVVHTEAPGSNTFEMQ----DIPAIAEAAHRHGAIVMMDNTWATP-------LYFRPLDFGVDISI 205 (395)
T ss_pred HHHHHhcC---cCceEEEEECCCCCCCcHH----HHHHHHHHHHHhCCEEEEECCccCc-------eecChhHcCCCEEE
Confidence 45666664 4588999997666545444 4999999999999999999999732 1122223346766
Q ss_pred -EecccccC-C-cceeEEEecHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 157 -TVGKPMGN-G-MPIGAVITSRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 157 -~~sK~l~~-G-~p~gav~~~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
...|.++| | .-.|+++.+++..+.+.. +++-.+++..+.+.|++.
T Consensus 206 ~S~tKy~~Gh~d~~~G~v~~~~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~ 285 (395)
T PRK05967 206 HAATKYPSGHSDILLGTVSANEKCWPQLLEAHGTLGLCAGPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPDVAR 285 (395)
T ss_pred EecccccCCCCCeeEEEEEcCHHHHHHHHHHHHHcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcE
Confidence 46799987 3 566777777776554432 234444455555555543
Q ss_pred ---------------------cCceeEEEEecc----cHHHHHHHHHHHH--CCcEEe--------e---------cCCC
Q psy11784 202 ---------------------LHIFWCLILLSI----TYYLYRYTRRMKE--AKIIVA--------N---------EGEY 237 (284)
Q Consensus 202 ---------------------~G~~~~i~~~~~----~~~~~~~~~~l~~--~Gv~~~--------~---------~~~~ 237 (284)
.|.|+.+++... .+.+.+|.+.|.= .++-+. + .+..
T Consensus 286 V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~ 365 (395)
T PRK05967 286 VLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYA 365 (395)
T ss_pred EECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCC
Confidence 466888888522 3456666666541 221110 0 0112
Q ss_pred CCEEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 238 GNVLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 238 ~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
++.+||+.-+ |+.+.+++-|+++++.+
T Consensus 366 ~~liRlSvGl----Ed~~dLi~Dl~~Al~~~ 392 (395)
T PRK05967 366 GPVIRLQIGL----EDVPDLKADLERGFAAA 392 (395)
T ss_pred CCeEEEEecc----CCHHHHHHHHHHHHHhh
Confidence 3568885444 56777777777777654
No 298
>PRK07582 cystathionine gamma-lyase; Validated
Probab=98.82 E-value=2e-07 Score=85.80 Aligned_cols=158 Identities=13% Similarity=0.123 Sum_probs=101.5
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEE--EecccccC-
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDII--TVGKPMGN- 164 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv--~~sK~l~~- 164 (284)
+++..|++|...+..|.+.+ +++|.++|+++|+++|+||+|. .+ |... .....|++ +++|.++|
T Consensus 131 ~~t~lV~le~p~NPtg~v~d----i~~I~~~a~~~g~~lvVD~t~~~~~---~~~p-----~~~g~Divv~S~sK~l~G~ 198 (366)
T PRK07582 131 AGADLVLAETPSNPGLDVCD----LAALAAAAHAAGALLVVDNTTATPL---GQRP-----LELGADLVVASDTKALTGH 198 (366)
T ss_pred cCceEEEEECCCCCCCCccC----HHHHHHHHHHcCCEEEEECCCCCcc---ccCc-----hhcCCcEEEecccccccCC
Confidence 35778888877766776665 9999999999999999999984 22 2111 12335776 46799976
Q ss_pred -CcceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc--------------
Q psy11784 165 -GMPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN-------------- 201 (284)
Q Consensus 165 -G~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~-------------- 201 (284)
|+.+|+++++ +++.+.+.. +++..+++..+.+.|++.
T Consensus 199 ~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~ 278 (366)
T PRK07582 199 SDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAHRSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGD 278 (366)
T ss_pred CCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCC
Confidence 5788988874 666665443 346667777777777765
Q ss_pred ------------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec---------------C--CCCCEEEEEcCCCCCHH
Q psy11784 202 ------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE---------------G--EYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 202 ------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------~--~~~~~lr~~p~l~~t~~ 252 (284)
.|.++.+++. +.+.+.++ +.+.+++.... + ...+.||++..+-..++
T Consensus 279 p~~~~~~~~~~~~gg~~s~~~~-~~~~~~~~---~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE~~~d 354 (366)
T PRK07582 279 PAHEVAARQMRRFGGLVSFELA-DAAAAERF---VAASRLVVAATSFGGVHTSADRRARWGDAVPEGFVRLSCGIEDTDD 354 (366)
T ss_pred ccHHHHHhhCCCCcceEEEEeC-CHHHHHHH---HHhCCcceecccCCCccchhhhHHHcCCCCCCCeEEEEeccCCHHH
Confidence 3567788874 33333333 33344544210 0 12357999887766555
Q ss_pred HHHHHHHHHH
Q psy11784 253 NVLFIVSTLN 262 (284)
Q Consensus 253 ~id~~~~~l~ 262 (284)
.|+.+.++|+
T Consensus 355 li~dl~~al~ 364 (366)
T PRK07582 355 LVADLERALD 364 (366)
T ss_pred HHHHHHHHHh
Confidence 5555555443
No 299
>KOG0634|consensus
Probab=98.82 E-value=6.9e-07 Score=81.24 Aligned_cols=189 Identities=10% Similarity=0.046 Sum_probs=121.2
Q ss_pred HHHHHHHHHhcCC------CeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcccc----C----
Q psy11784 77 AQAARNIMEAHRD------NIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG----S---- 141 (284)
Q Consensus 77 ~~~l~~~i~~~~~------~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G----~---- 141 (284)
.+.|++.+..... .....-.=|. |+-.|. ..+.+--++|.+|+++|++++|-||+|-=+ ..+ .
T Consensus 184 pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~-tls~errk~iy~LArKyDfLIVeDdpYy~L-q~~~y~~~~~~~ 261 (472)
T KOG0634|consen 184 PESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGN-TLSLERRKKIYQLARKYDFLIVEDDPYYFL-QMNTYNPSLELE 261 (472)
T ss_pred HHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCC-ccCHHHHHHHHHHHHHcCEEEEecCcccee-eccccCCCcccc
Confidence 4677887763221 1333444454 666675 558899999999999999999999998522 111 1
Q ss_pred -cccccccc--CCCCc------------EEEecccccCCcceeEEEecHHHHHhchh-----------------------
Q psy11784 142 -HFWAFQTQ--GAVPD------------IITVGKPMGNGMPIGAVITSRKIAESLNC----------------------- 183 (284)
Q Consensus 142 -~~~a~~~~--g~~pD------------iv~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------- 183 (284)
.-+..+.+ .+.|+ .-+|||-++-|+++|++.+++-..+....
T Consensus 262 ~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~ 341 (472)
T KOG0634|consen 262 SPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEVATSGPSGFSQGIVYAMLKR 341 (472)
T ss_pred CccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHHHHHHHhhhcceeecCcccccHHHHHHHHHH
Confidence 00010010 01222 33899999999999999999866654422
Q ss_pred ------hh-------hHHHHHHHHHHHHHhc------------cCceeEEEEe-------cc-cHHHHHHHHHHHHCCcE
Q psy11784 184 ------LD-------DNRPSGKYLVRPLGIN------------LHIFWCLILL-------SI-TYYLYRYTRRMKEAKII 230 (284)
Q Consensus 184 ------l~-------~~~~~~~~l~~~L~~~------------~G~~~~i~~~-------~~-~~~~~~~~~~l~~~Gv~ 230 (284)
++ .+..+...+...|.+- .|+++++++. +. ......+...+.++||.
T Consensus 342 wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~ 421 (472)
T KOG0634|consen 342 WGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVK 421 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeE
Confidence 11 2223333444444432 7889999984 11 12334455667799999
Q ss_pred EeecCC-----C---CC-EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 231 VANEGE-----Y---GN-VLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 231 ~~~~~~-----~---~~-~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+.++.. . .+ .+|++.++. +.|++++++++|..++++-
T Consensus 422 ~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 422 LVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred EecCceeEEcCccCCCcceEEEEeecC-CHHHHHHHHHHHHHHHHHH
Confidence 986531 1 23 789987766 7889999999999999874
No 300
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=98.82 E-value=3.1e-07 Score=85.10 Aligned_cols=92 Identities=13% Similarity=0.155 Sum_probs=63.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++. .++.+|++|...+..|.+.+ +++|.++|++||+++|+||+++ |+. .. .. ..| .|+
T Consensus 126 ~~~l~~~i~~--~~tklV~ie~p~NPtG~v~d----l~~I~~la~~~gi~livD~t~a~~~~--~~-~l---~~G--aDi 191 (385)
T PRK08574 126 TEDIIEAIKE--GRTKLVFIETMTNPTLKVID----VPEVAKAAKELGAILVVDNTFATPLL--YR-PL---RHG--ADF 191 (385)
T ss_pred HHHHHHhcCc--cCceEEEEECCCCCCCEecC----HHHHHHHHHHcCCEEEEECCCCcccc--CC-hh---hhC--CcE
Confidence 4566666641 25788999988888888777 8999999999999999999995 321 11 11 123 476
Q ss_pred E--EecccccC-Ccc-eeEEEe-cHHHHHhch
Q psy11784 156 I--TVGKPMGN-GMP-IGAVIT-SRKIAESLN 182 (284)
Q Consensus 156 v--~~sK~l~~-G~p-~gav~~-~~~i~~~~~ 182 (284)
+ +++|.++| |-. .|++++ ++++.+.+.
T Consensus 192 vv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~ 223 (385)
T PRK08574 192 VVHSLTKYIAGHNDVVGGVAVAWSGEFLEELW 223 (385)
T ss_pred EEeeCceeecCCCCceeEEEEECcHHHHHHHH
Confidence 6 56799986 433 354555 566666543
No 301
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=98.81 E-value=3.1e-07 Score=84.95 Aligned_cols=91 Identities=16% Similarity=0.128 Sum_probs=62.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++.+|++|...+..|.+.+ +++|.++|++||+++|+|++++.. ..+. ..+...|++
T Consensus 124 ~e~l~~ai~---~~t~lV~lesP~Nptg~~~d----i~~I~~la~~~gi~vivD~t~a~~-~~~~------p~~~gaDiv 189 (380)
T PRK06176 124 LSQIKKAIK---PNTKALYLETPSNPLLKITD----LAQCASVAKDHGLLTIVDNTFATP-YYQN------PLLLGADIV 189 (380)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEECCcccc-ccCC------ccccCCCEE
Confidence 456666654 46889999977777787776 999999999999999999999732 1122 123346887
Q ss_pred Eec--ccccC-C-cceeEEEec-HHHHHhc
Q psy11784 157 TVG--KPMGN-G-MPIGAVITS-RKIAESL 181 (284)
Q Consensus 157 ~~s--K~l~~-G-~p~gav~~~-~~i~~~~ 181 (284)
++| |.++| | .-.|+++++ +++.+.+
T Consensus 190 v~S~tK~l~g~~d~~gG~vv~~~~~~~~~~ 219 (380)
T PRK06176 190 VHSGTKYLGGHSDVVAGLVTTNNEALAQEI 219 (380)
T ss_pred EecCceeccCCccceeeEEEecHHHHHHHH
Confidence 654 99976 3 234556664 4554433
No 302
>PLN02590 probable tyrosine decarboxylase
Probab=98.80 E-value=2.7e-06 Score=81.72 Aligned_cols=189 Identities=11% Similarity=0.047 Sum_probs=118.2
Q ss_pred HHHHHHHHHhc-CCC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH-RDN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.+.|++.|++. ..+ ..+|+.----...|.+-| |++|.++|++||++|.+|=++.|+...-. -+.....|+ .
T Consensus 271 ~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp----l~~Ia~i~~~~g~WlHVDaA~GG~al~~~-~~r~~~~Gie~ 345 (539)
T PLN02590 271 PESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP----LVPLGNIAKKYGIWLHVDAAYAGNACICP-EYRKFIDGIEN 345 (539)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCeEEEecchhhhhhcCh-hhHHHhcCCcc
Confidence 67788888632 122 445554444445677777 99999999999999999988887632211 011112354 3
Q ss_pred CcEEEe--cccccCCcceeEEEecHH--HHHhchh---------------------------------------------
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK--IAESLNC--------------------------------------------- 183 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~--i~~~~~~--------------------------------------------- 183 (284)
.|-+++ -|.+...++.|++++++. +.+.+..
T Consensus 346 ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G 425 (539)
T PLN02590 346 ADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSEN 425 (539)
T ss_pred CCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHH
Confidence 687776 499988889999998753 1111100
Q ss_pred ----hhhHHHHHHHHHHHHHhccCc---------eeEEEEecc-------cHHHHHHHHHHHHCCcEEeecCC--CCCEE
Q psy11784 184 ----LDDNRPSGKYLVRPLGINLHI---------FWCLILLSI-------TYYLYRYTRRMKEAKIIVANEGE--YGNVL 241 (284)
Q Consensus 184 ----l~~~~~~~~~l~~~L~~~~G~---------~~~i~~~~~-------~~~~~~~~~~l~~~Gv~~~~~~~--~~~~l 241 (284)
+++.-+++++|.+.|++.-++ .+.+...+. .....++.+++.+.|.+...... +...|
T Consensus 426 ~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~l 505 (539)
T PLN02590 426 LRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVL 505 (539)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEE
Confidence 346667778888888764111 112222221 12345677778777765543211 22478
Q ss_pred EEEc-CCCCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 242 LFLP-AMCLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 242 r~~p-~l~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
|++. +...+++|++.+++.|.+...++.+
T Consensus 506 R~~i~n~~T~~~dv~~~~~~i~~~a~~~~~ 535 (539)
T PLN02590 506 RFAVGAPLTEEKHVTEAWQIIQKHASKFTR 535 (539)
T ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHhcc
Confidence 8865 4456899999999999998877753
No 303
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.79 E-value=7.3e-07 Score=83.84 Aligned_cols=74 Identities=19% Similarity=0.166 Sum_probs=55.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|.+.+..|.+.+ +++|.++|++||+++|+|++++. +... .......|++
T Consensus 145 ~e~l~~ai~---~~tklV~ie~~sNp~G~v~D----l~~I~~la~~~gi~liVD~t~a~-~~~~------~pl~~GaDiv 210 (436)
T PRK07812 145 LDAWRAAVR---PNTKAFFAETISNPQIDVLD----IPGVAEVAHEAGVPLIVDNTIAT-PYLI------RPLEHGADIV 210 (436)
T ss_pred HHHHHHhCC---CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcc-cccC------CchhcCCCEE
Confidence 556666554 56889999999999999988 99999999999999999998852 1111 1122347776
Q ss_pred --EecccccC
Q psy11784 157 --TVGKPMGN 164 (284)
Q Consensus 157 --~~sK~l~~ 164 (284)
+++|.++|
T Consensus 211 v~S~tK~lgg 220 (436)
T PRK07812 211 VHSATKYLGG 220 (436)
T ss_pred EEecccccCC
Confidence 46799985
No 304
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=98.79 E-value=9.3e-08 Score=87.32 Aligned_cols=87 Identities=15% Similarity=0.219 Sum_probs=63.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++.+|++..+++..|.+.+ +++|.++|++||+++|+|++|. +|.. ..+......|++
T Consensus 128 ~~~l~~~l~---~~~~lv~~~~~~n~tG~~~~----~~~I~~l~~~~~~~~ivD~a~~-~g~~-----~~~~~~~~~D~~ 194 (353)
T TIGR03235 128 VDELADAIR---PDTLLVSIMHVNNETGSIQP----IREIAEVLEAHEAFFHVDAAQV-VGKI-----TVDLSADRIDLI 194 (353)
T ss_pred HHHHHHhCC---CCCEEEEEEcccCCceeccC----HHHHHHHHHHcCCEEEEEchhh-cCCc-----cccccccCCCEE
Confidence 566776664 45788888999999998887 8999999999999999999996 4322 112122358888
Q ss_pred Eec--ccccCCcceeEEEecHHH
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKI 177 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i 177 (284)
+++ |.++ -..+|+++++++.
T Consensus 195 ~~s~~K~~g-p~g~g~l~~~~~~ 216 (353)
T TIGR03235 195 SCSGHKIYG-PKGIGALVIRKRG 216 (353)
T ss_pred EeehhhcCC-CCceEEEEEccCc
Confidence 877 9743 1237888888764
No 305
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.79 E-value=5.5e-07 Score=84.60 Aligned_cols=83 Identities=23% Similarity=0.299 Sum_probs=59.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.++ +++.+|++|...+..|.+.+ +++|.++|++||+++|+|++++. +. .........|++
T Consensus 139 ~e~l~~ai~---~~tklV~l~sp~NPtG~v~d----i~~I~~la~~~gi~vIvD~t~a~----~~---~~~pl~~gaDiv 204 (431)
T PRK08248 139 PENFEAAIT---DKTKALFAETIGNPKGDVLD----IEAVAAIAHEHGIPLIVDNTFAS----PY---LLRPIEHGADIV 204 (431)
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEeCCCCc----cc---cCChhHcCCCEE
Confidence 566777664 45788999977777788777 89999999999999999999851 11 111112347777
Q ss_pred E--ecccccC-CcceeEEEe
Q psy11784 157 T--VGKPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 ~--~sK~l~~-G~p~gav~~ 173 (284)
+ ++|.+++ |..+|++++
T Consensus 205 v~S~tK~lgg~g~~~Gg~v~ 224 (431)
T PRK08248 205 VHSATKFIGGHGTSIGGVIV 224 (431)
T ss_pred EEcCccccCCCCCceEEEEE
Confidence 5 5699987 566766665
No 306
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.78 E-value=1.6e-06 Score=74.57 Aligned_cols=181 Identities=17% Similarity=0.131 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 75 KYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 75 ~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.|.+.++++.++.++.++..++--+-|+.|.++. -+.+.++|++||++|++.=+|| .||.- .....+.+|
T Consensus 141 ~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D----akkva~ic~e~gvPlllN~AYt-~Grmp-----vs~ke~g~D 210 (382)
T COG1103 141 GYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD----AKKVAKICREYGVPLLLNCAYT-VGRMP-----VSGKEIGAD 210 (382)
T ss_pred HHHHHHHHHHhccCCCceEEEEeccCCCcCCchh----hHHHHHHHHHcCCceEeeccee-ecccc-----ccccccCCC
Confidence 3456677777655555777777777888888887 8899999999999999999998 55532 233457899
Q ss_pred EEEec--ccccCCcceeEEEecHHHHHhchh--------------------------h---hhHH----------HHHHH
Q psy11784 155 IITVG--KPMGNGMPIGAVITSRKIAESLNC--------------------------L---DDNR----------PSGKY 193 (284)
Q Consensus 155 iv~~s--K~l~~G~p~gav~~~~~i~~~~~~--------------------------l---~~~~----------~~~~~ 193 (284)
+++-| |+++..-|+|.+.++++..+.+.. + -++. ++.++
T Consensus 211 FiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~ 290 (382)
T COG1103 211 FIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARW 290 (382)
T ss_pred EEEecCccchhccCCeeEEeehhHHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 98776 889876699999999998876533 0 0222 34556
Q ss_pred HHHHHHhccCce-----------eEEEEec-------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 194 LVRPLGINLHIF-----------WCLILLS-------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 194 l~~~L~~~~G~~-----------~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
|.+.|.++-|.. .-++-.. ......-+.++|+++||.-...+ ...++.++ -+..|.|+++
T Consensus 291 fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G-~Tk~~K~s-vyGl~~Eqve 368 (382)
T COG1103 291 FVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPG-QTKYFKLS-VYGLSWEQVE 368 (382)
T ss_pred HHHHHHHhhhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccC-ceeEEEEE-eecCCHHHHH
Confidence 666666652222 1111110 01122346778888888754322 13455554 4678999999
Q ss_pred HHHHHHHHHHHH
Q psy11784 256 FIVSTLNRIFTS 267 (284)
Q Consensus 256 ~~~~~l~~~l~~ 267 (284)
..++++++++.+
T Consensus 369 ~V~~afkeI~ek 380 (382)
T COG1103 369 YVVDAFKEIAEK 380 (382)
T ss_pred HHHHHHHHHHHh
Confidence 999999988765
No 307
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=98.76 E-value=7.1e-07 Score=82.51 Aligned_cols=172 Identities=14% Similarity=0.086 Sum_probs=106.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC-CEEEEecccccCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG-GVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
.+++++.++ +++.+|++|+..+....++. +++|.++|+++| +++|+|...... +.+.....-.|+
T Consensus 130 ~~~l~~~l~---~~t~~v~~EspsNP~l~v~D----l~~i~~~a~~~g~~~~vVDnT~atp-------~~~~pL~~GaDi 195 (386)
T PF01053_consen 130 LEALEAALR---PNTKLVFLESPSNPTLEVPD----LEAIAKLAKEHGDILVVVDNTFATP-------YNQNPLELGADI 195 (386)
T ss_dssp HHHHHHHHC---TTEEEEEEESSBTTTTB-------HHHHHHHHHHTTT-EEEEECTTTHT-------TTC-GGGGT-SE
T ss_pred HHHHHhhcc---ccceEEEEEcCCCccccccc----HHHHHHHHHHhCCceEEeeccccce-------eeeccCcCCceE
Confidence 678888886 47999999998887666666 999999999998 999999877522 122222333677
Q ss_pred EE--ecccccC-C-cceeEEEec--HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc-
Q psy11784 156 IT--VGKPMGN-G-MPIGAVITS--RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 156 v~--~sK~l~~-G-~p~gav~~~--~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~- 201 (284)
++ ..|-++| | .-.|+++++ +++++.+.. +++..+++..+.+.|++.
T Consensus 196 vv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp 275 (386)
T PF01053_consen 196 VVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPFDAWLLLRGLRTLPLRMERQNENAEALAEFLEEHP 275 (386)
T ss_dssp EEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTST
T ss_pred EEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCC
Confidence 75 5699986 3 456777765 466665443 345566667777777665
Q ss_pred -------------------------cCceeEEEEecccHHHHHHHHHHHH--CCcE--------Eeec------------
Q psy11784 202 -------------------------LHIFWCLILLSITYYLYRYTRRMKE--AKII--------VANE------------ 234 (284)
Q Consensus 202 -------------------------~G~~~~i~~~~~~~~~~~~~~~l~~--~Gv~--------~~~~------------ 234 (284)
.|-++++++......+..|.+.|.= .|.- ..|.
T Consensus 276 ~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~ 355 (386)
T PF01053_consen 276 KVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEER 355 (386)
T ss_dssp TEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHH
T ss_pred CCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhh
Confidence 4558899996333466777777641 1211 1111
Q ss_pred ---CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 235 ---GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 235 ---~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+...+.||++.- -|+.+.+++-|+++++
T Consensus 356 ~~~Gi~~~liRlSvG----lEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 356 AEAGISDGLIRLSVG----LEDPDDLIADLEQALE 386 (386)
T ss_dssp HHTTS-TTEEEEE------SS-HHHHHHHHHHHHH
T ss_pred hccCCCCCeeEEEec----cCCHHHHHHHHHHhcC
Confidence 112356788533 3667888888877764
No 308
>PRK05939 hypothetical protein; Provisional
Probab=98.74 E-value=8.2e-07 Score=82.62 Aligned_cols=83 Identities=16% Similarity=0.212 Sum_probs=60.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++|.+.+..|.+.+ +++|.++|++||+++|+|++|+.. . .++......|++
T Consensus 121 ~e~l~~~l~---~~tklV~vesp~NptG~v~d----l~~I~~la~~~gi~livD~t~a~~----~---~~~~~~~gaDiv 186 (397)
T PRK05939 121 VQNVAAAIR---PNTRMVFVETIANPGTQVAD----LAGIGALCRERGLLYVVDNTMTSP----W---LFRPKDVGASLV 186 (397)
T ss_pred HHHHHHhCC---CCCeEEEEECCCCCCCCHHh----HHHHHHHHHHcCCEEEEECCcccc----c---ccCccccCCEEE
Confidence 566777664 56889999998888887766 999999999999999999998521 1 112222235666
Q ss_pred --EecccccC-CcceeEEEe
Q psy11784 157 --TVGKPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 --~~sK~l~~-G~p~gav~~ 173 (284)
+++|.++| |..+|+++.
T Consensus 187 v~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 187 INSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred EecCeecccCCCCeEEEEEe
Confidence 56799997 666666655
No 309
>PRK02769 histidine decarboxylase; Provisional
Probab=98.72 E-value=6.1e-06 Score=76.31 Aligned_cols=171 Identities=18% Similarity=0.204 Sum_probs=114.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC---CEEEEecccccCcccc----Ccccccccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG---GVVIADEIQCGMGRSG----SHFWAFQTQ 149 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g---~llI~DEv~tG~gr~G----~~~~a~~~~ 149 (284)
.++|++.++..+..+..|++--+..+.|.+.| +++|.++|++|| +++.+|=+|.|+ ..- ...+.+.
T Consensus 147 ~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp----i~~I~~i~~~~g~~~~~lHVDaA~gg~-~~p~~~~~~~~d~~-- 219 (380)
T PRK02769 147 YDDLISKIKENKNQPPIIFANIGTTMTGAIDN----IKEIQEILKKIGIDDYYIHADAALSGM-ILPFVNNPPPFSFA-- 219 (380)
T ss_pred HHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC----HHHHHHHHHHhCCCceEEEEEecccce-eecccCccccCCcc--
Confidence 67888888754334777777777778898888 999999999998 699999999864 211 0001111
Q ss_pred CCCCcEEEec--ccccCCcceeEEEecHHHHHhchh---------------------------------------hhhHH
Q psy11784 150 GAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC---------------------------------------LDDNR 188 (284)
Q Consensus 150 g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~---------------------------------------l~~~~ 188 (284)
. ..|.++++ |.+++-++.|+++.+++..+.+.. .++..
T Consensus 220 ~-~vDsis~s~HK~~~~P~g~G~l~~r~~~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~ 298 (380)
T PRK02769 220 D-GIDSIAISGHKFIGSPMPCGIVLAKKKYVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCL 298 (380)
T ss_pred C-CCCEEEECCcccCCCCCCcEEEEEehhhhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHH
Confidence 1 57888876 877666889999999877665421 33667
Q ss_pred HHHHHHHHHHHhccCceeE-------EEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHH
Q psy11784 189 PSGKYLVRPLGINLHIFWC-------LILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTL 261 (284)
Q Consensus 189 ~~~~~l~~~L~~~~G~~~~-------i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l 261 (284)
++.+++.++|++. |+-.. +.+. ... ..+ .+|..+.+. .+.+++..-..+|++.+|.+++-|
T Consensus 299 ~la~~l~~~L~~~-g~~~~~~p~~~~v~f~-~~~--~~~-----~~~w~l~~~---~~~~hi~~~~~~~~~~~~~f~~dl 366 (380)
T PRK02769 299 DMAQYAVDRLQAN-GIPAWRNPNSITVVFP-CPS--ERI-----WKKWHLATS---GNQAHIITMPHHNKQQIDSLIDEL 366 (380)
T ss_pred HHHHHHHHHHHhC-CCEEEcCCCceEEEEc-CCC--HHH-----HhCeeEccc---CCEEEEEECCCCCHHHHHHHHHHH
Confidence 7788888888773 33211 1121 111 122 156666543 346777666677899999999888
Q ss_pred HHHHHH
Q psy11784 262 NRIFTS 267 (284)
Q Consensus 262 ~~~l~~ 267 (284)
...+..
T Consensus 367 ~~~~~~ 372 (380)
T PRK02769 367 IFDLKN 372 (380)
T ss_pred HHHHhc
Confidence 777653
No 310
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=98.70 E-value=4e-06 Score=77.49 Aligned_cols=176 Identities=18% Similarity=0.159 Sum_probs=102.5
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC--CC
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA--VP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~--~p 153 (284)
.+++++.+...+ +++.+|++ + ...|...+ +++|.++|++||+++|.|++|+ +|-. +.-...|. .-
T Consensus 107 ~~~l~~~i~~~~~~~t~~v~~--~-~~~G~~~~----~~~i~~l~~~~~~~lI~D~a~a-~g~~----~~~~~~g~~~~~ 174 (380)
T TIGR03588 107 EDALEKKLAAAKGKLPKAIVP--V-DFAGKSVD----MQAIAALAKKHGLKIIEDASHA-LGAE----YGGKPVGNCRYA 174 (380)
T ss_pred HHHHHHHhhcccCCCceEEEE--e-CCCCccCC----HHHHHHHHHHcCCEEEEECCCc-ccCc----cCCEeCCCcccc
Confidence 567777776321 24566653 2 22465544 8999999999999999999998 3211 11122233 34
Q ss_pred cEEEec----ccccCCcceeEEEec-HHHHHhchh---------------------------------------------
Q psy11784 154 DIITVG----KPMGNGMPIGAVITS-RKIAESLNC--------------------------------------------- 183 (284)
Q Consensus 154 Div~~s----K~l~~G~p~gav~~~-~~i~~~~~~--------------------------------------------- 183 (284)
|+.++| |.++.| ..|+++.. +++.+.+..
T Consensus 175 d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q 253 (380)
T TIGR03588 175 DATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ 253 (380)
T ss_pred ceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH
Confidence 888876 888654 34556653 444432210
Q ss_pred -------hhhHHHHHHHHHHHHHhccCc--------------eeEEEEec-ccHHHHHHHHHHHHCCcEEeecC-C----
Q psy11784 184 -------LDDNRPSGKYLVRPLGINLHI--------------FWCLILLS-ITYYLYRYTRRMKEAKIIVANEG-E---- 236 (284)
Q Consensus 184 -------l~~~~~~~~~l~~~L~~~~G~--------------~~~i~~~~-~~~~~~~~~~~l~~~Gv~~~~~~-~---- 236 (284)
+++-+++.+++.+.|..+.+. +..+.+.. ......++.+.|.++||.++..- +
T Consensus 254 L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~~~~~~~~~~ 333 (380)
T TIGR03588 254 LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQVHYIPVHLQ 333 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcccCCcccccC
Confidence 123344455666666554110 11111211 11356789999999999775210 0
Q ss_pred -----------CC-------CEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 237 -----------YG-------NVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 237 -----------~~-------~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.+ +.|++-.....|++|++.+++.|++++
T Consensus 334 ~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 334 PYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred hhhhccCCcCCCcHHHHHHhceEEcCCCCCCCHHHHHHHHHHHHHhC
Confidence 01 345654455579999999999998764
No 311
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.69 E-value=2.1e-06 Score=80.77 Aligned_cols=81 Identities=20% Similarity=0.202 Sum_probs=58.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.|. +++.+|++|.+.+..|.+.+ +++|.++|++||+++|+|.+|+. |. . ......-.|++
T Consensus 139 ~~~l~~~i~---~~TklV~~e~~~np~g~v~D----i~~I~~la~~~gi~livD~t~a~----~~-~--~~pl~~GaD~v 204 (433)
T PRK08134 139 IDGWRAAIR---PNTRLLFGETLGNPGLEVLD----IPTVAAIAHEAGVPLLVDSTFTT----PY-L--LRPFEHGADLV 204 (433)
T ss_pred HHHHHHhcC---CCCeEEEEECCCcccCcccC----HHHHHHHHHHcCCEEEEECCCcc----cc-c--CCchhcCCCEE
Confidence 567777775 56888999987777788787 99999999999999999999851 21 1 11223457887
Q ss_pred Eec--ccccC-CcceeEE
Q psy11784 157 TVG--KPMGN-GMPIGAV 171 (284)
Q Consensus 157 ~~s--K~l~~-G~p~gav 171 (284)
++| |.++| |-.+|.+
T Consensus 205 v~S~tK~l~g~g~~~gG~ 222 (433)
T PRK08134 205 YHSATKFLGGHGTAIGGV 222 (433)
T ss_pred EeccccccCCCCCceEEE
Confidence 665 88875 4333433
No 312
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.67 E-value=8.7e-06 Score=78.19 Aligned_cols=94 Identities=19% Similarity=0.185 Sum_probs=62.6
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|++ .+..+.+|+.-....+.|.+-| +++|.++|++||+++.+|=+|.|....-. -+.....|+ .
T Consensus 249 ~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp----l~eIa~i~~~~g~~lHVDaA~gg~~~~~~-~~r~~l~gle~ 323 (522)
T TIGR03799 249 VDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP----LDEMADIAQELGCHFHVDAAWGGATLLSN-TYRHLLKGIER 323 (522)
T ss_pred HHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC----HHHHHHHHHHcCCeEEEEchhhhHHHhCH-HHHHHhcCchh
Confidence 6777877762 2222444444333336788888 99999999999999999999875411000 001112455 6
Q ss_pred CcEEEec--ccccCCcceeEEEecH
Q psy11784 153 PDIITVG--KPMGNGMPIGAVITSR 175 (284)
Q Consensus 153 pDiv~~s--K~l~~G~p~gav~~~~ 175 (284)
.|.++++ |.+.+-+..|+++.++
T Consensus 324 aDSit~d~HK~l~~P~g~G~llvr~ 348 (522)
T TIGR03799 324 ADSVTIDAHKQLYVPMGAGMVLFKD 348 (522)
T ss_pred CCEEEEChhhcCCcCcccEEEEEeC
Confidence 8999887 9887778889998864
No 313
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=98.67 E-value=6.1e-06 Score=76.27 Aligned_cols=90 Identities=16% Similarity=0.220 Sum_probs=60.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|+ |+. ..|...+ +++|.++|++||+++|.|++|+ +|.. +.-...|..-|+.
T Consensus 109 ~~~le~~i~---~~tk~Ii--p~~-~~G~~~d----~~~I~~la~~~~i~vIeDaa~~-~g~~----~~~~~~g~~~~~~ 173 (376)
T TIGR02379 109 ETLIESAIT---HRTKAIV--PVH-YAGVACD----MDTIMALANKHQLFVIEDAAQG-VMST----YKGRALGSIGHLG 173 (376)
T ss_pred HHHHHHhcC---cCceEEE--EeC-CCCCccC----HHHHHHHHHHCCCEEEEECccc-cCCc----cCCcccCCCCCEE
Confidence 456777664 3566665 443 3465555 8899999999999999999997 3321 1111234445888
Q ss_pred Eec----ccccCCcceeEEEec-HHHHHhc
Q psy11784 157 TVG----KPMGNGMPIGAVITS-RKIAESL 181 (284)
Q Consensus 157 ~~s----K~l~~G~p~gav~~~-~~i~~~~ 181 (284)
+|| |.++.|...|+++++ +++.+.+
T Consensus 174 ~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~ 203 (376)
T TIGR02379 174 TFSFHETKNYTSGGEGGALLINDQAFIERA 203 (376)
T ss_pred EEeCCCCCcCcccCCceEEEECCHHHHHHH
Confidence 898 999877677888775 5665543
No 314
>PLN02509 cystathionine beta-lyase
Probab=98.65 E-value=7.9e-07 Score=84.09 Aligned_cols=171 Identities=12% Similarity=0.130 Sum_probs=105.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++|...+..|.+.+ +++|.++|++||+++|+||+|. .+-.+. ..+...|++
T Consensus 207 ~e~l~~ai~---~~TklV~lesPsNPtG~i~D----l~~I~~lAk~~g~~lIVD~A~a-~~~~~~------pl~~gaDiv 272 (464)
T PLN02509 207 LDEVAAAIG---PQTKLVWLESPTNPRQQISD----IRKIAEMAHAQGALVLVDNSIM-SPVLSR------PLELGADIV 272 (464)
T ss_pred HHHHHHhCC---cCCeEEEEECCCCCCCCHHH----HHHHHHHHHHcCCEEEEECCcc-ccccCC------hhhcCCcEE
Confidence 455665553 46789999999888887755 9999999999999999999985 222222 123346887
Q ss_pred E--ecccccC-C-cceeEEEec-HHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGN-G-MPIGAVITS-RKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~-G-~p~gav~~~-~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ ++|.++| | .-.|+++++ +.+.+.+.. +++..++.+++.+.|++.
T Consensus 273 v~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V 352 (464)
T PLN02509 273 MHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTMALRIEKQQENARKIAMYLSSHPRV 352 (464)
T ss_pred EecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 5 5699986 3 334566654 333332111 345556667777777654
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHH--HCCc--------EEeec--------------
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMK--EAKI--------IVANE-------------- 234 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~--~~Gv--------~~~~~-------------- 234 (284)
.|.|+.+++ ...+.+.+|++.|. ..++ +..|.
T Consensus 353 ~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~-~~~~~~~~f~~~l~l~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~ 431 (464)
T PLN02509 353 KKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT-GSVALSKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREA 431 (464)
T ss_pred cEEECCCCCCCccHHHHHHhCCCCceEEEEEe-CCHHHHHHHHHcCCcceEcccCCCCCceeeCCcccccccCCHHHHHh
Confidence 366788887 34445666666554 1111 11111
Q ss_pred -CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 235 -GEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 235 -~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+...+.||++.- -|++|.+++-|+++++
T Consensus 432 ~Gi~~~liRlSvG----lE~~~DLi~Dl~~Al~ 460 (464)
T PLN02509 432 RGLTEDLVRISAG----IEDVDDLISDLDIAFR 460 (464)
T ss_pred cCCCCCeEEEEec----cCCHHHHHHHHHHHHc
Confidence 011356787543 3567777777777764
No 315
>KOG0633|consensus
Probab=98.64 E-value=4.5e-06 Score=71.51 Aligned_cols=178 Identities=17% Similarity=0.190 Sum_probs=109.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++.+.++ ....+.++++-+-....|... ..+.+.++.+.=+ +.++++||+|-.|.-.++ ....-.-.|.++
T Consensus 148 vdai~evl~-~ds~iK~~F~tSPgNPtg~~i-k~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpNLi 220 (375)
T KOG0633|consen 148 VDAIAEVLE-LDSKIKCIFLTSPGNPTGSII-KEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPNLI 220 (375)
T ss_pred HHHHHHHHh-ccccceEEEEcCCCCCCcccc-cHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCcee
Confidence 566666665 223466666554333345444 4444444443332 799999999987722222 222223347766
Q ss_pred ---Eeccccc-CCcceeEEEecHHHHHhchh--------------------------h----hhHHHHHHHHHHHHHhc-
Q psy11784 157 ---TVGKPMG-NGMPIGAVITSRKIAESLNC--------------------------L----DDNRPSGKYLVRPLGIN- 201 (284)
Q Consensus 157 ---~~sK~l~-~G~p~gav~~~~~i~~~~~~--------------------------l----~~~~~~~~~l~~~L~~~- 201 (284)
|+||.+| .|+++|+...+..+++.+.. + +.+.+...+|...|.++
T Consensus 221 vlqTlSKsfGLAGiRvG~~~~~~~ia~iln~~KaPYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~ 300 (375)
T KOG0633|consen 221 VLQTLSKSFGLAGIRVGYGAFPLSIAEILNRAKAPYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVP 300 (375)
T ss_pred ehhhhhhhcCcceeEeecccccHHHHHHHHhccCCccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCc
Confidence 6899999 68999999999998887654 1 12233344555555555
Q ss_pred ------cCc---eeEEEEe-cccHHHHHHHHHHH-HCCcEEeecCCC---CCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 202 ------LHI---FWCLILL-SITYYLYRYTRRMK-EAKIIVANEGEY---GNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 202 ------~G~---~~~i~~~-~~~~~~~~~~~~l~-~~Gv~~~~~~~~---~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.|. |+-+++. .++..+.++..++. +.||.++-.+.. .+.+|++ .-|+||-+.+++.|+++
T Consensus 301 ~~~~~~gg~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRit---vGt~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 301 FLNDYPGGSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRIT---VGTPEENTVLMKCLKQF 374 (375)
T ss_pred cccCCCCcccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEE---cCCcccchHHHHHHHhh
Confidence 222 3444443 34455666665555 789999854332 3689996 56888888888888765
No 316
>KOG1358|consensus
Probab=98.64 E-value=5.9e-07 Score=80.73 Aligned_cols=170 Identities=16% Similarity=0.184 Sum_probs=109.4
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-c-CccccCccccccccCCCC---cEEEec--cccc
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-G-MGRSGSHFWAFQTQGAVP---DIITVG--KPMG 163 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G-~gr~G~~~~a~~~~g~~p---Div~~s--K~l~ 163 (284)
-.-+++|.+.-+.|.+.| +++|.++..||..-+|+||-.+ | .|++|+ +..+|+++.+ |+++.| -+++
T Consensus 234 Rrfiv~EGl~~N~g~i~p----l~~iv~lk~Kyk~RvildEs~SfG~lg~~Gr--GvteH~~v~~~~iDiv~~sm~~ala 307 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP----LPEIVKLKNKYKFRVILDESLSFGVLGKTGR--GVTEHFGVPITDIDIVTASMETALA 307 (467)
T ss_pred eEEEEEEeeccCCCcccc----cHHHHHHHhhheEEEEEecccccccccccCc--cccccCCCCccceeeeeeccccccc
Confidence 457889999999999999 9999999999999999999987 3 477886 4678998864 566543 4444
Q ss_pred CCcceeEEEecHHHHH--hchh------------------------------hhhHHHHHHHHHHHHHhccCc-------
Q psy11784 164 NGMPIGAVITSRKIAE--SLNC------------------------------LDDNRPSGKYLVRPLGINLHI------- 204 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~--~~~~------------------------------l~~~~~~~~~l~~~L~~~~G~------- 204 (284)
+| -|+++++.-+.+ .+.. .+.++.+...+...|+...++
T Consensus 308 s~--GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~ 385 (467)
T KOG1358|consen 308 SG--GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPE 385 (467)
T ss_pred cc--CceeecceeeEeeeeccccceeeeccCchhhhhhHHHHHHHHhhCcchhhhhhccccccchhhhcCCceEEecCcC
Confidence 21 133333322221 1111 112334444444444443222
Q ss_pred --eeEEEEec-------ccHHHHHHHHHHHHCCcEEeecC--------CCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 205 --FWCLILLS-------ITYYLYRYTRRMKEAKIIVANEG--------EYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 205 --~~~i~~~~-------~~~~~~~~~~~l~~~Gv~~~~~~--------~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+.-+.+.+ +.....+++..++.+|+++.... +-...||++....+|++|++.+.+.+++....
T Consensus 386 SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358|consen 386 SPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred CceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHHHHHHHHHHh
Confidence 11222221 11235678888887798876432 12357999999999999999999999887654
Q ss_pred H
Q psy11784 268 L 268 (284)
Q Consensus 268 ~ 268 (284)
+
T Consensus 466 ~ 466 (467)
T KOG1358|consen 466 V 466 (467)
T ss_pred h
Confidence 3
No 317
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.64 E-value=4.3e-06 Score=78.54 Aligned_cols=183 Identities=16% Similarity=0.158 Sum_probs=119.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh------CCEEEEecccccCcc---ccCcccccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI------GGVVIADEIQCGMGR---SGSHFWAFQ 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr---~G~~~~a~~ 147 (284)
.++|++.++ +++..|++--+..+.|.+.| +++|.++|+++ |+++.+|=+|.|+-. .++..+.+.
T Consensus 176 ~~~L~~~i~---~~t~lV~~t~g~t~tG~idp----i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~ 248 (431)
T TIGR01788 176 PEQVVEAVD---ENTIGVVCILGTTYTGEYED----VKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR 248 (431)
T ss_pred HHHHHHHHh---hCCeEEEEEeCCCCCcccCC----HHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC
Confidence 678888886 34667777667778899998 99999999999 999999999987421 232111111
Q ss_pred ccCCCCcEEEec--ccccCCcceeEEEecHH--HHHhchh----------------------------------------
Q psy11784 148 TQGAVPDIITVG--KPMGNGMPIGAVITSRK--IAESLNC---------------------------------------- 183 (284)
Q Consensus 148 ~~g~~pDiv~~s--K~l~~G~p~gav~~~~~--i~~~~~~---------------------------------------- 183 (284)
....|.++++ |.+.+...+|+++.+++ +.+.+..
T Consensus 249 --~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~ 326 (431)
T TIGR01788 249 --LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRK 326 (431)
T ss_pred --CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHH
Confidence 1245777776 76544466788887654 2222100
Q ss_pred -hhhHHHHHHHHHHHHHhccC----------ceeEEEEecc---cHHHHHHHHHHHHCCcEEeec----CC-CCCEEEEE
Q psy11784 184 -LDDNRPSGKYLVRPLGINLH----------IFWCLILLSI---TYYLYRYTRRMKEAKIIVANE----GE-YGNVLLFL 244 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~~G----------~~~~i~~~~~---~~~~~~~~~~l~~~Gv~~~~~----~~-~~~~lr~~ 244 (284)
+++..++.++|.++|++.-+ .++.+.+.+. .....++.+.|.++|+.+... .. +...+|+.
T Consensus 327 i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~~~G~~~~~~~~p~~~~~~~~lR~~ 406 (431)
T TIGR01788 327 IMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLRERGWIVPAYTLPKNAEDIVVMRIV 406 (431)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHHHCCCcccCCCCCCccCCeEEEEEE
Confidence 34666778888888877511 1122333221 234567899999999875321 11 22357877
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 245 PAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 245 p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.--.++++.++++++.|..++..+
T Consensus 407 ~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 407 VREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred ecCCCCHHHHHHHHHHHHHHHHhh
Confidence 655668999999999999988765
No 318
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.64 E-value=2e-06 Score=80.91 Aligned_cols=83 Identities=14% Similarity=0.193 Sum_probs=56.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.+|++|...+..|.+.+ +++|.++|+++|+++|+|.+++. | . .......| .|++
T Consensus 145 ~e~l~~~l~---~~tk~V~~e~~~Np~~~v~d----i~~I~~la~~~gi~livD~t~a~-g---~-~~~p~~~G--aDiv 210 (437)
T PRK05613 145 PESWQAAVQ---PNTKAFFGETFANPQADVLD----IPAVAEVAHRNQVPLIVDNTIAT-A---A-LVRPLELG--ADVV 210 (437)
T ss_pred HHHHHHhCC---ccCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCeEEEECCCcc-c---c-ccChHHhC--CCEE
Confidence 466777665 45778888877666677777 99999999999999999999852 2 1 11111233 5888
Q ss_pred Eec--ccccC-CcceeEEEe
Q psy11784 157 TVG--KPMGN-GMPIGAVIT 173 (284)
Q Consensus 157 ~~s--K~l~~-G~p~gav~~ 173 (284)
++| |.++| |--+|.+++
T Consensus 211 v~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 211 VASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred EeeccceecCCCcceeEEEE
Confidence 765 98886 433344333
No 319
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=98.63 E-value=1.2e-06 Score=80.60 Aligned_cols=171 Identities=13% Similarity=0.091 Sum_probs=106.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.+. +++.+|++|...+..|.... +++|.++|+++|+++|+||++.. +. .....+.-.|++
T Consensus 126 ~~~l~~~i~---~~TklV~lesP~NPtg~~~d----i~~I~~la~~~gi~vvvD~t~~~----~~---~~~pl~~gaDiv 191 (364)
T PRK07269 126 EEELIAAIE---EDTDIVYIETPTNPLMVEFD----IEKVAKLAHAKGAKVIVDNTFYS----PI---YQRPIELGADIV 191 (364)
T ss_pred HHHHHHhcC---cCceEEEEECCCCCCCeeeC----HHHHHHHHHHcCCEEEEECCCcc----cc---cCCchhhCCcEE
Confidence 456666664 45788999987776677665 99999999999999999999641 11 112234557888
Q ss_pred Eec--ccccC-C-cceeEEEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 TVG--KPMGN-G-MPIGAVIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~~s--K~l~~-G-~p~gav~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
++| |.++| | .-.|++++ ++++.+.+.. +++-.++..++.+.|+..
T Consensus 192 v~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~tL~~r~~~~~~na~~~a~~L~~~p~v 271 (364)
T PRK07269 192 LHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAV 271 (364)
T ss_pred EecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 764 98986 3 23466666 4566554432 335556666777777653
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHHH----------CCcEEeecC---------------CCCCEEEEEcCCCC
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMKE----------AKIIVANEG---------------EYGNVLLFLPAMCL 249 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~~----------~Gv~~~~~~---------------~~~~~lr~~p~l~~ 249 (284)
.|.++++++. ..+.+.+|...+.- +++++.|.. ...+.||++.-+
T Consensus 272 ~~v~ypg~gg~~sf~~~-~~~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGl-- 348 (364)
T PRK07269 272 KEVLYTGKGGMISFKVA-DETRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI-- 348 (364)
T ss_pred cEEeCCCcCcEEEEEEC-CHHHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--
Confidence 5778888884 33444555554331 234443321 113577885433
Q ss_pred CHHHHHHHHHHHHHHHH
Q psy11784 250 TTENVLFIVSTLNRIFT 266 (284)
Q Consensus 250 t~~~id~~~~~l~~~l~ 266 (284)
|+++.+++-|+++++
T Consensus 349 --E~~~dli~dl~~al~ 363 (364)
T PRK07269 349 --EDARDLIADLKQALE 363 (364)
T ss_pred --CCHHHHHHHHHHHhc
Confidence 567777777776653
No 320
>PLN03032 serine decarboxylase; Provisional
Probab=98.63 E-value=1e-05 Score=74.49 Aligned_cols=168 Identities=21% Similarity=0.185 Sum_probs=106.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC-----CEEEEecccccCccccCccccc--c--
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG-----GVVIADEIQCGMGRSGSHFWAF--Q-- 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g-----~llI~DEv~tG~gr~G~~~~a~--~-- 147 (284)
+++|++.|+.....+.+|++--...+.|.+-| +++|.++|++|| +++.+|=+|.|+ .. . +.. .
T Consensus 148 ~~~L~~~i~~~~~~~~lvv~tagtt~tG~idp----i~eI~~i~~~~g~~~~~~~lHvDaA~gg~-~~-p--~~~~~~~~ 219 (374)
T PLN03032 148 YDDLERALAKNRDKPAILNVNIGTTVKGAVDD----LDRILRILKELGYTEDRFYIHCDGALFGL-MM-P--FVSRAPEV 219 (374)
T ss_pred HHHHHHHHHHcCCCCEEEEEEecCcCCccCCC----HHHHHHHHHHhCCCCCCeeEEEEccchhh-hh-h--ccCCCccc
Confidence 68888888754334566666555667788888 999999999997 589999998754 11 1 100 0
Q ss_pred ccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh---------------------------------------hhh
Q psy11784 148 TQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC---------------------------------------LDD 186 (284)
Q Consensus 148 ~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~---------------------------------------l~~ 186 (284)
.+....|.++++ |.++..++.|+++.+++..+.+.. +++
T Consensus 220 ~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~ 299 (374)
T PLN03032 220 TFRKPIGSVSVSGHKFLGCPMPCGVALTRKKHVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQH 299 (374)
T ss_pred CCCcCCcEEEECcccccCCCcCeEEEEEEchhhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 111247878776 766556789999999877664422 346
Q ss_pred HHHHHHHHHHHHHhccCceeEE-------EEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHH
Q psy11784 187 NRPSGKYLVRPLGINLHIFWCL-------ILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVS 259 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~~G~~~~i-------~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~ 259 (284)
.-++.+++.+.|++. |..... -+. .. ... . ..+|..+.+. .+.+++..--.++++.+|++++
T Consensus 300 ~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~-~~-~~~----~-~~~~w~l~~~---~~~~hi~vm~~~~~~~id~fi~ 368 (374)
T PLN03032 300 CMRNAHYLKDRLTEA-GLTCRLNELSSTVVFE-RP-MDE----A-FIKKWQLACE---GDIAHVVVMPNVTVEKLDEFVE 368 (374)
T ss_pred HHHHHHHHHHHHHhC-CCcEEECCCceEEEEc-CC-CcH----h-Hhheeeeccc---CCEEEEEECCCCCHHHHHHHHH
Confidence 667788888888874 333211 121 11 111 1 2356655532 2456665555567899999988
Q ss_pred HHHH
Q psy11784 260 TLNR 263 (284)
Q Consensus 260 ~l~~ 263 (284)
-|.+
T Consensus 369 dl~~ 372 (374)
T PLN03032 369 ELVE 372 (374)
T ss_pred HHhc
Confidence 7754
No 321
>PRK04311 selenocysteine synthase; Provisional
Probab=98.62 E-value=3.5e-06 Score=79.73 Aligned_cols=178 Identities=17% Similarity=0.123 Sum_probs=111.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceec--CCC--cccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-----cccccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFV--VHG--AVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-----HFWAFQ 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~--~~G--~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-----~~~a~~ 147 (284)
.+++++.+. +++++|+++...+ ..| ..++ +++|.++|++||+++|+|....-++-.+. .....+
T Consensus 206 ~~dle~aI~---~~TklV~~vh~sN~~i~G~~~~~d----l~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~ 278 (464)
T PRK04311 206 LRDYEQAIN---ENTALLLKVHTSNYRIEGFTKEVS----LAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQE 278 (464)
T ss_pred HHHHHHhcC---ccCeEEEEEcCCCccccccCCcCC----HHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhh
Confidence 566777665 4578888776543 233 3455 99999999999999999984211111111 011111
Q ss_pred ccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh------------------------------------------
Q psy11784 148 TQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC------------------------------------------ 183 (284)
Q Consensus 148 ~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~------------------------------------------ 183 (284)
....-.|++++| |.++|.. .|++++++++++.+..
T Consensus 279 ~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~~li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~ 357 (464)
T PRK04311 279 LLAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTR 357 (464)
T ss_pred HHhcCCcEEEecCcccccCCc-eEEEEEcHHHHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcC
Confidence 122457999998 9998753 6888899988876652
Q ss_pred -hhhHHHHHHHHHHHHHhcc-----------------Cce-------eEEEEecccHHHHHHHHHHHHC--CcEEeecCC
Q psy11784 184 -LDDNRPSGKYLVRPLGINL-----------------HIF-------WCLILLSITYYLYRYTRRMKEA--KIIVANEGE 236 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~~-----------------G~~-------~~i~~~~~~~~~~~~~~~l~~~--Gv~~~~~~~ 236 (284)
+++..++++.+.+.|+... |.+ +++.+.+.......+.+.|++. .|+.+ .
T Consensus 358 ~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~~~~~~~l~~~lr~~~~~i~~r---~ 434 (464)
T PRK04311 358 SPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPKDRSLEALAARLRLLPPPVIGR---I 434 (464)
T ss_pred CHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCCCCCHHHHHHHHhcCCCCEEEE---E
Confidence 2355556666666665421 111 1222222223467788888863 56665 3
Q ss_pred CCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 237 YGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 237 ~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
..+.+.+- +-++.++|++.++++|.+++.
T Consensus 435 ~~~~~~ld-~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 435 EDGRLLLD-LRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred ECCEEEEE-eCcCCHHHHHHHHHHHHHHhh
Confidence 34666665 457789999999999988753
No 322
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=98.62 E-value=1.7e-06 Score=79.97 Aligned_cols=161 Identities=16% Similarity=0.059 Sum_probs=105.0
Q ss_pred EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCcceeEE
Q psy11784 94 LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGMPIGAV 171 (284)
Q Consensus 94 vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~p~gav 171 (284)
|.+--+....|.+.| +++|.+ ++||+++++|=+|+ +|-. -+-.+ . .|++++| |++++...+|.+
T Consensus 140 V~~~h~~t~tG~~~p----i~~I~~--~~~g~~~vVDa~qs-~G~~---pidv~--~--iD~~~~s~~K~l~~P~G~g~l 205 (378)
T PRK03080 140 VVFTWNGTTTGVRVP----VARWIG--ADREGLTICDATSA-AFAL---PLDWS--K--LDVYTFSWQKVLGGEGGHGMA 205 (378)
T ss_pred EEEEecCCccceecc----chhhcc--ccCCCeEEEecccc-cccC---CCCHH--H--CcEEEEehhhhCCCCCceEEE
Confidence 445455556787887 888888 78999999998887 4321 12222 2 4888776 999764458888
Q ss_pred EecHHHHHhch-------------------h------------------------h-------------hhHHHHHHHHH
Q psy11784 172 ITSRKIAESLN-------------------C------------------------L-------------DDNRPSGKYLV 195 (284)
Q Consensus 172 ~~~~~i~~~~~-------------------~------------------------l-------------~~~~~~~~~l~ 195 (284)
..+++..+.+. . + ++.+++.++++
T Consensus 206 ~v~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~ 285 (378)
T PRK03080 206 ILSPRAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLY 285 (378)
T ss_pred EECHHHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 88887754321 0 1 13344555666
Q ss_pred HHHHhccC-------------ceeEEEEecc--cHHHHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHH
Q psy11784 196 RPLGINLH-------------IFWCLILLSI--TYYLYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIV 258 (284)
Q Consensus 196 ~~L~~~~G-------------~~~~i~~~~~--~~~~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~ 258 (284)
+.|+++.+ .++.+.+ +. ......+...+.++|+++..++. ..+.+|+++....|++||+.++
T Consensus 286 ~~l~~~~~~~~~~~~~~~~s~~i~~~~~-~~~~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~ 364 (378)
T PRK03080 286 DWAEKTPWATPLVADPATRSNTSVTLDF-VDAQAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALT 364 (378)
T ss_pred HHHHhCCCcccccCCccccCccEEEEEc-CCchHHHHHHHHHHHHHcCCeeccccccCCCCcEEEecCCCCCHHHHHHHH
Confidence 66665411 1222222 22 01234567777788988875432 2478999999999999999999
Q ss_pred HHHHHHHHHHh
Q psy11784 259 STLNRIFTSLQ 269 (284)
Q Consensus 259 ~~l~~~l~~~~ 269 (284)
+.|+++++++.
T Consensus 365 ~al~~~~~~~~ 375 (378)
T PRK03080 365 PWLDWAFERLK 375 (378)
T ss_pred HHHHHHHHHHh
Confidence 99999887653
No 323
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=98.59 E-value=4.5e-06 Score=77.22 Aligned_cols=87 Identities=23% Similarity=0.311 Sum_probs=55.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.+.+++.+. +++.+|+ |+.- .|...+ +++|.++|++||+++|.|++|+ |.-..|+ . ....|. ++
T Consensus 111 ~~~l~~~i~---~~tkav~--~~~~-~G~~~d----~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~-~--~g~~g~--~~ 175 (379)
T PRK11658 111 PEAIEAAIT---PRTKAII--PVHY-AGAPAD----LDAIRAIGERYGIPVIEDAAHAVGTYYKGR-H--IGARGT--AI 175 (379)
T ss_pred HHHHHHhcc---cCCeEEE--EeCC-CCCcCC----HHHHHHHHHHcCCeEEEECCCccCCeECCe-e--cCCCCC--EE
Confidence 566777664 3466665 3322 455544 8999999999999999999997 4322232 1 112333 66
Q ss_pred EEec--ccccCCcceeEEEec-HHHHH
Q psy11784 156 ITVG--KPMGNGMPIGAVITS-RKIAE 179 (284)
Q Consensus 156 v~~s--K~l~~G~p~gav~~~-~~i~~ 179 (284)
.+|+ |.+++| ..|+++.+ +++.+
T Consensus 176 ~Sf~~~K~l~~g-~GG~v~~~~~~~~~ 201 (379)
T PRK11658 176 FSFHAIKNITCA-EGGLVVTDDDELAD 201 (379)
T ss_pred EeCCCCCcCccc-CceEEEECCHHHHH
Confidence 6665 777654 45666664 56544
No 324
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.58 E-value=7.8e-06 Score=74.84 Aligned_cols=177 Identities=17% Similarity=0.205 Sum_probs=117.9
Q ss_pred HHHHHHHHHhcCCC--eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDN--IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~--vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+++.++- ++.+-.|. +.|+..| +++|.++|++||+++|+|-|-+ +| |. .+-.+.+|+ |
T Consensus 119 p~~v~~~L~~~~~~~~V~~vH~ET---STGvlnp----l~~I~~~~k~~g~l~iVDaVsS-~G--g~-~~~vd~wgi--D 185 (383)
T COG0075 119 PEEVEEALDKDPDIKAVAVVHNET---STGVLNP----LKEIAKAAKEHGALLIVDAVSS-LG--GE-PLKVDEWGI--D 185 (383)
T ss_pred HHHHHHHHhcCCCccEEEEEeccC---cccccCc----HHHHHHHHHHcCCEEEEEeccc-CC--Cc-ccchhhcCc--c
Confidence 57888888843322 44445554 4677777 9999999999999999997776 44 22 344455554 5
Q ss_pred EEEe--cccccCCcceeEEEecHHHHHhchh-------------------------------------------------
Q psy11784 155 IITV--GKPMGNGMPIGAVITSRKIAESLNC------------------------------------------------- 183 (284)
Q Consensus 155 iv~~--sK~l~~G~p~gav~~~~~i~~~~~~------------------------------------------------- 183 (284)
+++- -|+|++-=.++.+..+++..+.+..
T Consensus 186 v~itgSQK~l~~PPGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~ 265 (383)
T COG0075 186 VAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEA 265 (383)
T ss_pred EEEecCchhccCCCccceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHH
Confidence 5544 4999863337788888887776543
Q ss_pred -hhhHHHHHHHHHHHHHhccCceeEE------------EEecccHHHHHHHHHHHHC-CcEEeecC--CCCCEEEEEcCC
Q psy11784 184 -LDDNRPSGKYLVRPLGINLHIFWCL------------ILLSITYYLYRYTRRMKEA-KIIVANEG--EYGNVLLFLPAM 247 (284)
Q Consensus 184 -l~~~~~~~~~l~~~L~~~~G~~~~i------------~~~~~~~~~~~~~~~l~~~-Gv~~~~~~--~~~~~lr~~p~l 247 (284)
.++-+.+++.++++++++ |+-... .. |......++...++++ |+.+.++. ..+..+||---=
T Consensus 266 r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~-P~g~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG 343 (383)
T COG0075 266 RIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKV-PEGVDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMG 343 (383)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEEC-CCCCCcHHHHHHHHHhCCEEecccccccCccEEEEecCc
Confidence 235666777788888874 442221 11 3332333444456654 88887542 134688987544
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q psy11784 248 CLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~ 268 (284)
..+..++..++.+|+.++.++
T Consensus 344 ~~~~~dv~~~l~ale~~L~~~ 364 (383)
T COG0075 344 NVRPEDVLAALAALEAALREL 364 (383)
T ss_pred cCCHHHHHHHHHHHHHHHHHc
Confidence 579999999999999999987
No 325
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.57 E-value=1.3e-06 Score=78.26 Aligned_cols=84 Identities=19% Similarity=0.260 Sum_probs=67.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.|+ +++.+|.+|.+.+.++.++. +++|.++|+++|++||+|...+. .+-++....-.|||
T Consensus 137 ~~~~~~aI~---~nTkavf~EtigNP~~~v~D----ie~ia~iAh~~gvpliVDNT~at-------pyl~rP~~hGADIV 202 (426)
T COG2873 137 PENFEAAID---ENTKAVFAETIGNPGLDVLD----IEAIAEIAHRHGVPLIVDNTFAT-------PYLCRPIEHGADIV 202 (426)
T ss_pred HHHHHHHhC---cccceEEEEeccCCCccccC----HHHHHHHHHHcCCcEEEecCCCc-------ceecchhhcCCCEE
Confidence 466777776 67999999999998888888 99999999999999999987652 23445556668888
Q ss_pred E--ecccccC-CcceeEEEec
Q psy11784 157 T--VGKPMGN-GMPIGAVITS 174 (284)
Q Consensus 157 ~--~sK~l~~-G~p~gav~~~ 174 (284)
+ .+|.+|| |-.+|.++..
T Consensus 203 vHS~TK~igGhGt~iGG~iVD 223 (426)
T COG2873 203 VHSATKYIGGHGTAIGGVIVD 223 (426)
T ss_pred EEeecccccCCccccceEEEe
Confidence 5 6799997 7777777754
No 326
>PRK07671 cystathionine beta-lyase; Provisional
Probab=98.55 E-value=2.5e-06 Score=78.82 Aligned_cols=134 Identities=14% Similarity=0.129 Sum_probs=86.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.++ +++.+|++|...+..|.... +++|.++|+++|+++|+||++... ..+. . .....|++
T Consensus 124 ~~~l~~ai~---~~tklV~le~P~NPtg~~~d----l~~I~~la~~~g~~lvvD~a~~~~-~~~~-p-----~~~g~Div 189 (377)
T PRK07671 124 LEEVEEAIR---PNTKAIYVETPTNPLLKITD----IKKISTIAKEKGLLTIVDNTFMTP-YWQS-P-----ISLGADIV 189 (377)
T ss_pred HHHHHHhcC---CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCCcc-ccCC-h-----hhhCCeEE
Confidence 466666664 46789999877666676665 999999999999999999998631 1122 1 12335776
Q ss_pred E--ecccccCC--cceeEEEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc---
Q psy11784 157 T--VGKPMGNG--MPIGAVIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN--- 201 (284)
Q Consensus 157 ~--~sK~l~~G--~p~gav~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~--- 201 (284)
+ ++|.++|. .-.|++++ ++++++.+.. +++..++...+.+.|++.
T Consensus 190 v~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l~tl~~R~~~~~~na~~la~~L~~~~~v 269 (377)
T PRK07671 190 LHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPAV 269 (377)
T ss_pred EecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCcChHHHHHHHHHHHHHHHHHHHHcCCCe
Confidence 4 57999852 22344555 4566654433 335556666666666643
Q ss_pred -----------------------cCceeEEEEecccHHHHHHHHHHH
Q psy11784 202 -----------------------LHIFWCLILLSITYYLYRYTRRMK 225 (284)
Q Consensus 202 -----------------------~G~~~~i~~~~~~~~~~~~~~~l~ 225 (284)
.|.++.+++ ...+.+.+|...|.
T Consensus 270 ~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~-~~~~~~~~f~~~l~ 315 (377)
T PRK07671 270 NKVYYPGLPSHPNHELAKEQANGFGGMISFDV-GSEETANKVLERLQ 315 (377)
T ss_pred eEEECCCCCCCccHHHHHhhCCCCCceEEEEe-CCHHHHHHHHHhCC
Confidence 466888888 44455666666554
No 327
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=98.54 E-value=1.3e-05 Score=75.57 Aligned_cols=81 Identities=20% Similarity=0.249 Sum_probs=54.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc--ccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR--SGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr--~G~~~~a~~~~g~~pD 154 (284)
.+.+++.+. +++.+|++.+..|. +..+++|+++|++||++||.|++|+ +|- .|+ ..|-.-|
T Consensus 149 ~~~le~~i~---~~tkaVi~~~~~G~-------p~dl~~I~~la~~~gi~vIeDaa~a-~G~~~~g~------~~G~~gd 211 (438)
T PRK15407 149 ASLLEAAVS---PKTKAIMIAHTLGN-------PFDLAAVKAFCDKHNLWLIEDNCDA-LGSTYDGR------MTGTFGD 211 (438)
T ss_pred HHHHHHHcC---cCCeEEEEeCCCCC-------hhhHHHHHHHHHHCCCEEEEECccc-hhhhcCCe------eeeccCc
Confidence 566776664 46888998886553 2348999999999999999999997 321 122 1222347
Q ss_pred EEEec----ccccCCcceeEEEecH
Q psy11784 155 IITVG----KPMGNGMPIGAVITSR 175 (284)
Q Consensus 155 iv~~s----K~l~~G~p~gav~~~~ 175 (284)
+.+|| |.++.| .-|+++.++
T Consensus 212 ~~~fSf~~~k~~~~g-eGG~l~t~d 235 (438)
T PRK15407 212 IATLSFYPAHHITMG-EGGAVFTND 235 (438)
T ss_pred eEEEeCCCCCCcccc-CceEEEECC
Confidence 77765 666543 237777753
No 328
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=98.52 E-value=8e-06 Score=77.10 Aligned_cols=94 Identities=19% Similarity=0.210 Sum_probs=61.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEccee--cCCC--cccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc--c------c
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVF--VVHG--AVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH--F------W 144 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~--~~~G--~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~--~------~ 144 (284)
.+++++.+. +++++|+++... ++.| ..++ +++|.++|++||+++|+|-. +|-.+.. + .
T Consensus 201 l~dle~aI~---~~T~lv~~~h~sN~~~~G~~~~~d----l~~I~~la~~~g~~vivD~~---sG~l~~~~~~gl~~~p~ 270 (454)
T TIGR00474 201 LKDYEDAIT---ENTALLLKVHTSNYRIVGFTEEVS----IAELVALGREHGLPVMEDLG---SGSLVDLSRYGLPDEPT 270 (454)
T ss_pred HHHHHHhcC---cCCEEEEEEccCcccccCCCCCCC----HHHHHHHHHHcCCeEEEECC---CcccccchhccCCCCcc
Confidence 466666664 557777777653 3345 3556 99999999999999999952 3222210 0 0
Q ss_pred cccccCCCCcEEEec--ccccCCcceeEEEecHHHHHhc
Q psy11784 145 AFQTQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESL 181 (284)
Q Consensus 145 a~~~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~ 181 (284)
..+....-.|++++| |.++|.. .|+++++++.++.+
T Consensus 271 ~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~~i~~l 308 (454)
T TIGR00474 271 VQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKELIERL 308 (454)
T ss_pred cccHhHcCCCEEEecCccccCCCe-EEEEEECHHHHHhh
Confidence 111223457999999 9998643 68888888877543
No 329
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=98.48 E-value=1.4e-05 Score=70.68 Aligned_cols=175 Identities=17% Similarity=0.186 Sum_probs=113.7
Q ss_pred HHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccc--cCCCCcEE
Q psy11784 79 AARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQT--QGAVPDII 156 (284)
Q Consensus 79 ~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~--~g~~pDiv 156 (284)
++++.+ .+++|.|++..|+--.|.... +.+|-+++++||++++.|=+|+- |. ...+. .|+.--|-
T Consensus 158 ~~~~~~---~dd~AvV~L~~V~y~TGql~d----m~aiT~~AH~~galv~wDLAHsa----Ga--vp~~Lh~~gaDfaig 224 (407)
T COG3844 158 ALEEAI---TDDVAVVLLSHVNYKTGQLLD----MRAITALAHQHGALVGWDLAHSA----GA--VPVDLHAAGADFAIG 224 (407)
T ss_pred HHHHhh---ccceEEEEeccccccccceee----HHHHHHHHHhcCceEEeehhccc----CC--cceeecccCCCeeee
Confidence 445544 378999999999998898887 99999999999999999999971 21 12222 23222234
Q ss_pred EecccccCCc-ceeEEEecHHHHHhchh---------------------------------------------------h
Q psy11784 157 TVGKPMGNGM-PIGAVITSRKIAESLNC---------------------------------------------------L 184 (284)
Q Consensus 157 ~~sK~l~~G~-p~gav~~~~~i~~~~~~---------------------------------------------------l 184 (284)
|--|-|+||- ..+++.+.++..+...+ +
T Consensus 225 csyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i 304 (407)
T COG3844 225 CSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDI 304 (407)
T ss_pred eeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCH
Confidence 5557776652 23444443333222111 3
Q ss_pred hhHHHHHH----HHHHHHHhccCceeEEEEe-c------------ccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEc-C
Q psy11784 185 DDNRPSGK----YLVRPLGINLHIFWCLILL-S------------ITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLP-A 246 (284)
Q Consensus 185 ~~~~~~~~----~l~~~L~~~~G~~~~i~~~-~------------~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p-~ 246 (284)
..+++++- ++.+.++... -..++++. | ....+.+++++|.++||+.-.. .+++|||.| |
T Consensus 305 ~~lR~kSlaLTd~fieLvEa~~-~~~~l~l~tPr~~~~rGsqvS~~hp~~~~V~qaLi~rGVigD~R--~P~vlRfgftP 381 (407)
T COG3844 305 TELRKKSLALTDYFIELVEARC-EYYGLTLVTPRAHEERGSQVSLYHPHGYQVMQALIDRGVIGDFR--EPDVLRFGFTP 381 (407)
T ss_pred HHHHHhhhHHHHHHHHHHHhcc-ccCCcEEeccchhhhccceeeEecCcHHHHHHHHHHcCcccccc--CCCeeeecCcc
Confidence 34555443 4444443321 11233332 1 0125788999999999998653 358999988 8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
+..+-.|+=.+++.|+++++...
T Consensus 382 lY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 382 LYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred ceechhHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998764
No 330
>PLN02263 serine decarboxylase
Probab=98.47 E-value=3.4e-05 Score=72.75 Aligned_cols=226 Identities=18% Similarity=0.116 Sum_probs=132.6
Q ss_pred CcHHHHHHHHHHHccCCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHH
Q psy11784 1 SEANDLALQLARAYTGRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAA 80 (284)
Q Consensus 1 seA~e~AlklAr~~~~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 80 (284)
||||-.|+..||.+..+ .++..+..=|-...=+..+-+ + .+..+|.....+ -| .++|
T Consensus 162 TEaNL~Al~aARe~~~~-~vvy~S~~aH~Sv~KAa~llg--------i--~~~~Vp~d~~g~----mD--------~~aL 218 (470)
T PLN02263 162 TEGNLHGILVGREVFPD-GILYASRESHYSVFKAARMYR--------M--ECVKVDTLVSGE----ID--------CADF 218 (470)
T ss_pred HHHHHHHHHHHHhhcCC-cEEEEcCCccHHHHHHHHhcC--------C--cceEeccCCCCc----Cc--------HHHH
Confidence 68999999999997433 344443333422211111111 1 122234322111 11 6788
Q ss_pred HHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCC-----EEEEecccccCcc----ccCccccccccCC
Q psy11784 81 RNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGG-----VVIADEIQCGMGR----SGSHFWAFQTQGA 151 (284)
Q Consensus 81 ~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~-----llI~DEv~tG~gr----~G~~~~a~~~~g~ 151 (284)
++.|++.......|+.---....|.+-| +++|.++|++||+ +|.+|=++.|+-- .-. .|. +-.
T Consensus 219 ~~aI~~d~~~P~iVvataGTT~~GAiDp----i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~-~~d---f~~ 290 (470)
T PLN02263 219 KAKLLANKDKPAIINVNIGTTVKGAVDD----LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP-KVT---FKK 290 (470)
T ss_pred HHHHHhCCCCcEEEEEEecCCCCcCCCC----HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc-ccC---CCc
Confidence 8888754433445544433335677777 9999999999997 9999999887511 100 111 112
Q ss_pred CCcEEEec--ccccCCcceeEEEecHHHHHhchh---------------------------------------hhhHHHH
Q psy11784 152 VPDIITVG--KPMGNGMPIGAVITSRKIAESLNC---------------------------------------LDDNRPS 190 (284)
Q Consensus 152 ~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~---------------------------------------l~~~~~~ 190 (284)
..|-+++. |.++..+|.|.++.+++..+.+.. +++..++
T Consensus 291 ~vDSIsvD~HK~l~~P~~cgvll~R~~~~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~~~~~ 370 (470)
T PLN02263 291 PIGSVSVSGHKFVGCPMPCGVQITRMEHINVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQKCLRN 370 (470)
T ss_pred CccEEEECCccccCCCcCEEEEEEehhhHhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 36666664 888888999999999776544422 3355567
Q ss_pred HHHHHHHHHhccCceeEE-------EEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 191 GKYLVRPLGINLHIFWCL-------ILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 191 ~~~l~~~L~~~~G~~~~i-------~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
.+++.+.|++. |+.... -+. .. ......+|..+.+. ++.+++...-.++.+.+|++++-|.+
T Consensus 371 A~~l~~~l~~~-g~~~~~~p~s~~V~f~-~p------~~~~~~~gW~L~~~---~~~~Hivvmphv~~~~id~fi~DL~~ 439 (470)
T PLN02263 371 AHYLKDRLREA-GISAMLNELSSTVVFE-RP------KDEEFVRRWQLACQ---GNIAHVVVMPSVTIEKLDYFLKELVE 439 (470)
T ss_pred HHHHHHHHHhC-CCeEEeCCCceEEEEe-cC------chHHhhcceEEccC---CCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 78888888874 432211 111 11 11123567766642 24455544444688999999999988
Q ss_pred HHHHH
Q psy11784 264 IFTSL 268 (284)
Q Consensus 264 ~l~~~ 268 (284)
..+..
T Consensus 440 ~~~~~ 444 (470)
T PLN02263 440 KRSTW 444 (470)
T ss_pred HHhhh
Confidence 87643
No 331
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=98.45 E-value=1.8e-05 Score=73.50 Aligned_cols=191 Identities=12% Similarity=0.089 Sum_probs=110.6
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc----cC------ccccCcccc
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC----GM------GRSGSHFWA 145 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t----G~------gr~G~~~~a 145 (284)
++.|++.|+.++ +++..+.++-+.+..|..+.|.+.+++++++|++||+.+++|=+-- -| +..|....-
T Consensus 169 l~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~e 248 (467)
T TIGR02617 169 LEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQ 248 (467)
T ss_pred HHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHH
Confidence 788999998554 4588888887777778888899999999999999999999994320 00 111110000
Q ss_pred c-cccCCCCcE--EEecccccCCcceeEEEe-cHH----HHHhchh----------------------------------
Q psy11784 146 F-QTQGAVPDI--ITVGKPMGNGMPIGAVIT-SRK----IAESLNC---------------------------------- 183 (284)
Q Consensus 146 ~-~~~g~~pDi--v~~sK~l~~G~p~gav~~-~~~----i~~~~~~---------------------------------- 183 (284)
. ..+--..|. +|++|+++. |+|.+++ +++ +.+..+.
T Consensus 249 I~rE~~~~aDsvt~slsKglgA--pvGg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~y 326 (467)
T TIGR02617 249 ITRETYKYADMLAMSAKKDAMV--PMGGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDW 326 (467)
T ss_pred HHHHhhccCCEEEEEcCCCCCC--cccceEEecchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHH
Confidence 0 000012454 467898864 6665554 443 2333222
Q ss_pred hhhHHHHHHHHHHHHHhccCce--------eEEEEe------cc-cHHHHHHHHHHH-HCCcEEeecCC-----------
Q psy11784 184 LDDNRPSGKYLVRPLGINLHIF--------WCLILL------SI-TYYLYRYTRRMK-EAKIIVANEGE----------- 236 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~~G~~--------~~i~~~------~~-~~~~~~~~~~l~-~~Gv~~~~~~~----------- 236 (284)
++.=-..-+||.+.|.+. |.- +-++.. |. .--+..++-+|. +.||-..-.|.
T Consensus 327 l~~ri~qv~yl~~~L~~~-Gvpi~~~Gghav~iDa~~~lphip~~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~ 405 (467)
T TIGR02617 327 LAYRINQVQYLVNGLEEI-GVVCQQAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGK 405 (467)
T ss_pred HHHHHHHHHHHHHHHHhC-CCcEEecCccEEEEehhhhCCCCChhhCcHHHHHHHHHHHcCcceEeecceecccCCCCCc
Confidence 111112345667777663 331 122211 11 122556666665 55665321110
Q ss_pred --C--CCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 237 --Y--GNVLLFLPAM-CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 237 --~--~~~lr~~p~l-~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
. -..+|++.|- +.|.+++|..++++..+.++-..
T Consensus 406 ~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~~~~ 444 (467)
T TIGR02617 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAPN 444 (467)
T ss_pred cCCCccceeeeccccccccHhHHHHHHHHHHHHHhhhhh
Confidence 0 1467877654 45999999999999998876543
No 332
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=98.45 E-value=3.8e-05 Score=70.93 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=55.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc-c-cCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR-S-GSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-~-G~~~~a~~~~g~~pD 154 (284)
.+++++.+. +++.+|++ + ...|.... +++|.++|++||+++|.|++|+ +|. . |+ ..|-.-|
T Consensus 109 ~~~le~~i~---~~tk~i~~--~-~~~G~~~~----~~~i~~la~~~~i~vIeD~a~a-~g~~~~~~------~~g~~~~ 171 (375)
T PRK11706 109 ETLIEAAIT---PKTRAIVP--V-HYAGVACE----MDTIMALAKKHNLFVVEDAAQG-VMSTYKGR------ALGTIGH 171 (375)
T ss_pred HHHHHHhcC---CCCeEEEE--e-CCCCCccC----HHHHHHHHHHcCCEEEEECccc-cccccCCe------eeecCcC
Confidence 567777665 34566653 2 23465444 8999999999999999999997 332 1 21 1122247
Q ss_pred EEEec----ccccCCcceeEEEecHHHHH
Q psy11784 155 IITVG----KPMGNGMPIGAVITSRKIAE 179 (284)
Q Consensus 155 iv~~s----K~l~~G~p~gav~~~~~i~~ 179 (284)
+.+|| |.++.|...+++..++++.+
T Consensus 172 ~~~~Sf~~~K~l~~g~gG~~~~~~~~~~~ 200 (375)
T PRK11706 172 IGCFSFHETKNYTAGEGGALLINDPALIE 200 (375)
T ss_pred EEEEeCCCCccccccCCeEEEECCHHHHH
Confidence 88888 99976544445555566654
No 333
>KOG1549|consensus
Probab=98.44 E-value=9.2e-06 Score=74.55 Aligned_cols=85 Identities=21% Similarity=0.232 Sum_probs=69.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.|+ +++.+|.+.-|.++-|...| +++|..+|+++|+.+++|-+|. .|+ .-.+-..+.+|.+
T Consensus 171 ~~~~~~~i~---~~T~lv~I~~Vnn~~gv~~P----v~EI~~icr~~~v~v~~DaAQa----vG~--i~vDV~eln~D~~ 237 (428)
T KOG1549|consen 171 ISKLREAIR---SKTRLVSIMHVNNEIGVLQP----VKEIVKICREEGVQVHVDAAQA----VGK--IPVDVQELNADFL 237 (428)
T ss_pred HHHHHHhcC---CCceEEEEEecccCcccccc----HHHHHHHhCcCCcEEEeehhhh----cCC--ccccHHHcCchhe
Confidence 677777776 67999999999999999999 9999999999999999999996 344 2445556778888
Q ss_pred Eec--ccccCCcceeEEEecH
Q psy11784 157 TVG--KPMGNGMPIGAVITSR 175 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~ 175 (284)
+++ |++|.- ++|++.+++
T Consensus 238 s~s~HK~ygp~-~iGaLYvr~ 257 (428)
T KOG1549|consen 238 SISAHKIYGPP-GIGALYVRR 257 (428)
T ss_pred eeecccccCCC-cceEEEEcc
Confidence 765 888741 289999886
No 334
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=98.44 E-value=1.9e-05 Score=73.70 Aligned_cols=189 Identities=10% Similarity=0.072 Sum_probs=117.7
Q ss_pred HHHHHHHHHhcC-CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc----cccCC
Q psy11784 77 AQAARNIMEAHR-DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF----QTQGA 151 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~----~~~g~ 151 (284)
.+.|++.|.... ..++.|.+|-.....|..+.|.+.+++++++|++||+.||.|=++. || .+ +|-- .+.+.
T Consensus 156 ~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~-~g-NA--~~I~~re~g~~~~ 231 (450)
T TIGR02618 156 LKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRC-VE-NA--YFIKEREQGYEDK 231 (450)
T ss_pred HHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccch-hh-Ch--hhhhcccccccCC
Confidence 688888887432 3467777776666555567889999999999999999999998775 31 11 1110 01122
Q ss_pred -----------CCcEEEecccccC-CcceeEEEe--cHHHHHhchh----------------------------------
Q psy11784 152 -----------VPDIITVGKPMGN-GMPIGAVIT--SRKIAESLNC---------------------------------- 183 (284)
Q Consensus 152 -----------~pDiv~~sK~l~~-G~p~gav~~--~~~i~~~~~~---------------------------------- 183 (284)
..|. |++|+... +.|+|.+++ .+++++..+.
T Consensus 232 ~i~ei~~e~~~~aD~-~~~S~~Kd~~~~~GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y 310 (450)
T TIGR02618 232 SIAEILKEMMSYADG-CTMSGKKDCLVNIGGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEY 310 (450)
T ss_pred CHHHHHHHHhccCcE-EEEeeccCCCCCCceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHH
Confidence 2355 66666643 357777776 6677665443
Q ss_pred hhhHHHHHHHHHHHHHhc--------cCceeEEEEe------cc-cHHHHHHHHHHH-HCCcEEeecCC-----------
Q psy11784 184 LDDNRPSGKYLVRPLGIN--------LHIFWCLILL------SI-TYYLYRYTRRMK-EAKIIVANEGE----------- 236 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~--------~G~~~~i~~~------~~-~~~~~~~~~~l~-~~Gv~~~~~~~----------- 236 (284)
+++-....++|.+.|++. .|..+.++.. |. .--+..++.+|. +.||-..-.|.
T Consensus 311 ~~~r~~~a~~La~~L~~~Gvpv~~p~ggh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~ 390 (450)
T TIGR02618 311 IEHRVKQVRYLGDKLKAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGE 390 (450)
T ss_pred HHHHHHHHHHHHHHHHHCCCcccCCCCcceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCc
Confidence 123333467788888775 3334444432 11 123556666666 55665432110
Q ss_pred --C--CCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 237 --Y--GNVLLFLPAM-CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 237 --~--~~~lr~~p~l-~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
. -..+|++.|- +.|.+++|...+++..+.++-..
T Consensus 391 ~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 429 (450)
T TIGR02618 391 HHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKHRDD 429 (450)
T ss_pred ccCCccceeeeccccccccHhHHHHHHHHHHHHHhhHhh
Confidence 0 1467877654 45999999999999999877544
No 335
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=98.40 E-value=1.1e-05 Score=74.10 Aligned_cols=162 Identities=11% Similarity=0.029 Sum_probs=104.4
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGM 166 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~ 166 (284)
+++..|.+--.-...|.+.| +++| ++++|+++|+|=+|+ +|- . ..-.+ .-|++++| |.+++--
T Consensus 127 ~~~~lV~~~h~et~tG~~~p----i~~I---~~~~g~~~iVDavqs-~g~--~-~idv~----~~D~~~~s~~K~lg~~~ 191 (361)
T TIGR01366 127 PGVDVIAWAHNETSTGVAVP----VRRP---EGSDDALVVIDATSG-AGG--L-PVDIA----ETDVYYFAPQKNFASDG 191 (361)
T ss_pred CCCCEEEEcccCCccceecc----cccc---cccCCCeEEEEcCcc-ccC--C-CCCHH----HCCEEEEEchhhcCCCC
Confidence 34666666666666777776 4444 689999999999997 321 1 12222 15888776 9887410
Q ss_pred ceeEEEecHHHHHhchh------------------------------------------------------hhhHHHHHH
Q psy11784 167 PIGAVITSRKIAESLNC------------------------------------------------------LDDNRPSGK 192 (284)
Q Consensus 167 p~gav~~~~~i~~~~~~------------------------------------------------------l~~~~~~~~ 192 (284)
-++.++.+++..+.+.. .++.+++.+
T Consensus 192 Gl~~~~~s~~~~~~~~~~~~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~ 271 (361)
T TIGR01366 192 GLWLAIMSPAALERIEAIAASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSS 271 (361)
T ss_pred ceEEEEECHHHHhhhhcccCCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 24555667766533220 124445556
Q ss_pred HHHHHHHhccCc---e-----------eEEEEecccHHHHHHHHHHHHCCcEEeecC--CCCCEEEEEcCCCCCHHHHHH
Q psy11784 193 YLVRPLGINLHI---F-----------WCLILLSITYYLYRYTRRMKEAKIIVANEG--EYGNVLLFLPAMCLTTENVLF 256 (284)
Q Consensus 193 ~l~~~L~~~~G~---~-----------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~--~~~~~lr~~p~l~~t~~~id~ 256 (284)
++++.|++. +. + ..+.+ ++......+.+.|.++||.+.+.. ..++.+|+......|++||+.
T Consensus 272 ~l~~~l~~~-~~~~~~~~~~~~~s~~v~~v~~-~~g~~~~~v~~~L~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~ 349 (361)
T TIGR01366 272 RLYSWAQER-PYATPFVTDPGKRSQVVGTIDF-VDDIDAATVAKILRANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEA 349 (361)
T ss_pred HHHHHHHhC-CCcccCCCChhhcccceEEEEC-CCccCHHHHHHHHHHCCCeeccCccccCCCcEEEEcCCCCCHHHHHH
Confidence 666666664 21 1 11222 333456778889999999987531 124679999999999999999
Q ss_pred HHHHHHHHHHH
Q psy11784 257 IVSTLNRIFTS 267 (284)
Q Consensus 257 ~~~~l~~~l~~ 267 (284)
+++.|++++++
T Consensus 350 l~~al~~~~~~ 360 (361)
T TIGR01366 350 LTECVDWVVER 360 (361)
T ss_pred HHHHHHHHHhh
Confidence 99999998765
No 336
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.34 E-value=8.1e-05 Score=67.47 Aligned_cols=187 Identities=12% Similarity=0.052 Sum_probs=112.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHH-HHHhCCEEEEecccccCccccCc--c-----c-ccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDY-IHEIGGVVIADEIQCGMGRSGSH--F-----W-AFQ 147 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l-~~~~g~llI~DEv~tG~gr~G~~--~-----~-a~~ 147 (284)
++.+|+++. ..+.|.++++=|.+++-..+.++.+..++|..+ +...++.++-|.+|+----++.. . + .+.
T Consensus 160 mD~Ve~LV~-~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~ 238 (425)
T PF12897_consen 160 MDMVEELVA-EDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEEPRDALLNILDACA 238 (425)
T ss_dssp HHHHHHHTH-TSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSSS------HHHHHH
T ss_pred HHHHHHHHh-cCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccccchhhhHHHHHHH
Confidence 788888876 234599999999999866678899999999999 44689999999998621001110 0 0 001
Q ss_pred ccCCCCcEE----EecccccCCcceeEEEecHHHHHhchh--------------hh------------------------
Q psy11784 148 TQGAVPDII----TVGKPMGNGMPIGAVITSRKIAESLNC--------------LD------------------------ 185 (284)
Q Consensus 148 ~~g~~pDiv----~~sK~l~~G~p~gav~~~~~i~~~~~~--------------l~------------------------ 185 (284)
.. -.||.+ +.||-.-.|-.++++.++++-++.+.. +.
T Consensus 239 ~A-Gnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~ 317 (425)
T PF12897_consen 239 KA-GNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSVQTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILR 317 (425)
T ss_dssp HT-T-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHHH-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHH
T ss_pred Hc-CCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcCceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHh
Confidence 11 246643 568887677789999999887776654 10
Q ss_pred -hHHHHHHHHHHHHH-hc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecCC--------CCCEEEEEcC
Q psy11784 186 -DNRPSGKYLVRPLG-IN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEGE--------YGNVLLFLPA 246 (284)
Q Consensus 186 -~~~~~~~~l~~~L~-~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~--------~~~~lr~~p~ 246 (284)
+.+.+-+.|.++|. .. -|.|++++.. ...+.++++.+.+.||.+.+.|. ....||+.|+
T Consensus 318 PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~--~G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS 395 (425)
T PF12897_consen 318 PKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVL--DGTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPS 395 (425)
T ss_dssp HHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEES--TT-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--S
T ss_pred hhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecC--CChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCC
Confidence 22223344455555 22 5667777774 35788999999999999988542 4468999988
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q psy11784 247 MCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 247 l~~t~~~id~~~~~l~~~l~~~ 268 (284)
+- +-+|++.+++.|.-+++-.
T Consensus 396 ~P-~leel~~Am~~~~~cv~la 416 (425)
T PF12897_consen 396 YP-SLEELETAMDVFATCVKLA 416 (425)
T ss_dssp SS--HHHHHHHHHHHHHHHHHH
T ss_pred CC-CHHHHHHHHHHHHHHHHHH
Confidence 76 8999999999998777644
No 337
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=98.29 E-value=8.8e-05 Score=69.53 Aligned_cols=190 Identities=12% Similarity=0.095 Sum_probs=112.6
Q ss_pred HHHHHHHHHhc-CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCc-------cccCccccc--
Q psy11784 77 AQAARNIMEAH-RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMG-------RSGSHFWAF-- 146 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~g-------r~G~~~~a~-- 146 (284)
.+.|++.|... ...++.|.++-.....|..+.|.+.+++++++|++||+.||.|=++. +| |... +...
T Consensus 163 ~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra-~gna~fI~~re~~-y~~~~i 240 (460)
T PRK13237 163 LDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRC-VENAYFIKEREEG-YQDKSI 240 (460)
T ss_pred HHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcch-hcChhhhcccccc-cCCCcH
Confidence 67888888743 33466666665555555567788899999999999999999998876 32 1010 0000
Q ss_pred ----cccCCCCcEEEec--ccccCCcce-eEEEe-cHHHHHhchh----------------------------------h
Q psy11784 147 ----QTQGAVPDIITVG--KPMGNGMPI-GAVIT-SRKIAESLNC----------------------------------L 184 (284)
Q Consensus 147 ----~~~g~~pDiv~~s--K~l~~G~p~-gav~~-~~~i~~~~~~----------------------------------l 184 (284)
....-.-|.+|+| |.++. +. |+++. .+++++.++. +
T Consensus 241 ~ei~~e~~s~aD~~t~S~~K~~~~--~~GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAvgl~E~~~~~y~ 318 (460)
T PRK13237 241 KEIVHEMFSYADGCTMSGKKDCLV--NIGGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAIGIEESVQYEYI 318 (460)
T ss_pred hHHhhhccCcCcEEEEeCCCCCCC--CCceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHhHHHhhchHHHH
Confidence 0011236888776 55543 33 55665 4566665543 1
Q ss_pred hhHHHHHHHHHHHHHhc--------cCceeEEEEe------cc-cHHHHHHHHHHH-HCCcEEeecC-------C-----
Q psy11784 185 DDNRPSGKYLVRPLGIN--------LHIFWCLILL------SI-TYYLYRYTRRMK-EAKIIVANEG-------E----- 236 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~--------~G~~~~i~~~------~~-~~~~~~~~~~l~-~~Gv~~~~~~-------~----- 236 (284)
+.--...++|.+.|.+. .|.-+.++.. |. .--+..++.+|. +.||-..-.| +
T Consensus 319 ~~ri~~~~~l~~~L~~~Gvpv~~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~ 398 (460)
T PRK13237 319 EHRVGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGEN 398 (460)
T ss_pred HHHHHHHHHHHHHHHHCCCceecCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCeEeecceecccCCCCCcc
Confidence 12223456677777664 2333333322 11 123556666665 4566443111 0
Q ss_pred -C--CCEEEEEcCC-CCCHHHHHHHHHHHHHHHHHHhh
Q psy11784 237 -Y--GNVLLFLPAM-CLTTENVLFIVSTLNRIFTSLQM 270 (284)
Q Consensus 237 -~--~~~lr~~p~l-~~t~~~id~~~~~l~~~l~~~~~ 270 (284)
. -..+|++.|- +.|.+++|...+++..+.++-..
T Consensus 399 ~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~~~~ 436 (460)
T PRK13237 399 HYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKHRED 436 (460)
T ss_pred CCCccceeeeccccccccHHHHHHHHHHHHHHHHhHhh
Confidence 0 1467877654 45999999999999999877544
No 338
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=98.29 E-value=2.8e-05 Score=72.97 Aligned_cols=74 Identities=16% Similarity=0.109 Sum_probs=53.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.|. +++.+|++|...+..+.++. +++|.++|++||+++|+|+++. + ...++.+..-.||+
T Consensus 137 ~~~l~~~I~---~~Tk~I~~e~pgnP~~~v~D----i~~I~~iA~~~gi~livD~T~~----t---P~~~~pl~~GADIv 202 (432)
T PRK06702 137 ADEIVALAN---DKTKLVYAESLGNPAMNVLN----FKEFSDAAKELEVPFIVDNTLA----T---PYLCQAFEHGANII 202 (432)
T ss_pred HHHHHHhCC---cCCeEEEEEcCCCccccccC----HHHHHHHHHHcCCEEEEECCCC----c---hhhCChhhcCCCEE
Confidence 466777775 45788999975444555555 9999999999999999999874 1 23344444457776
Q ss_pred --EecccccC
Q psy11784 157 --TVGKPMGN 164 (284)
Q Consensus 157 --~~sK~l~~ 164 (284)
.++|.++|
T Consensus 203 v~S~TKy~~G 212 (432)
T PRK06702 203 VHSTTKYIDG 212 (432)
T ss_pred EEccccccCC
Confidence 56798886
No 339
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=98.27 E-value=4.4e-06 Score=74.53 Aligned_cols=78 Identities=18% Similarity=0.200 Sum_probs=50.2
Q ss_pred HHHHHHHHHhcCCCee-EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIA-TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~va-avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pD 154 (284)
.+++++.+++.+ ++. .++..|. ..|...+ +++|.++|++||+++|+||+|.. +...+. +.........|
T Consensus 142 ~~~l~~~l~~~~-~~k~v~l~~p~--~~G~~~d----l~~I~~~~~~~g~~livDeA~~~~~~~~~~--~~~~~~~~~~d 212 (294)
T cd00615 142 PETFKKALIEHP-DAKAAVITNPT--YYGICYN----LRKIVEEAHHRGLPVLVDEAHGAHFRFHPI--LPSSAAMAGAD 212 (294)
T ss_pred HHHHHHHHHhCC-CceEEEEECCC--CCCEecC----HHHHHHHHHhcCCeEEEECcchhhhccCcc--cCcchhhcCCc
Confidence 577888876433 344 4455563 3677666 99999999999999999999974 211221 11111123467
Q ss_pred EEE--eccccc
Q psy11784 155 IIT--VGKPMG 163 (284)
Q Consensus 155 iv~--~sK~l~ 163 (284)
+++ +.|.++
T Consensus 213 iv~~S~hK~l~ 223 (294)
T cd00615 213 IVVQSTHKTLP 223 (294)
T ss_pred EEEEchhcccc
Confidence 764 569885
No 340
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.21 E-value=0.00017 Score=66.56 Aligned_cols=164 Identities=15% Similarity=0.129 Sum_probs=104.8
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEE--ecccccCC-
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIIT--VGKPMGNG- 165 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~--~sK~l~~G- 165 (284)
+++.+|.+|+.-+.--.++. +++|.++|+++|+++|+|..... + ..++....-.||++ ..|-++|.
T Consensus 148 ~~tk~v~lEtPsNP~l~v~D----I~~i~~~A~~~g~~vvVDNTfat----P---~~q~PL~~GaDIVvhSaTKyl~GHs 216 (396)
T COG0626 148 PNTKLVFLETPSNPLLEVPD----IPAIARLAKAYGALVVVDNTFAT----P---VLQRPLELGADIVVHSATKYLGGHS 216 (396)
T ss_pred cCceEEEEeCCCCccccccc----HHHHHHHHHhcCCEEEEECCccc----c---cccChhhcCCCEEEEeccccccCCc
Confidence 57999999987665555555 99999999999999999997752 1 22333444478885 55999984
Q ss_pred -cceeEEEec-HHHHHhchh----------------------------hhhHHHHHHHHHHHHHhc--------------
Q psy11784 166 -MPIGAVITS-RKIAESLNC----------------------------LDDNRPSGKYLVRPLGIN-------------- 201 (284)
Q Consensus 166 -~p~gav~~~-~~i~~~~~~----------------------------l~~~~~~~~~l~~~L~~~-------------- 201 (284)
.-.|+++++ +++.+.+.. +++..+++..+.+.|++.
T Consensus 217 Dvl~G~v~~~~~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~sh 296 (396)
T COG0626 217 DVLGGVVLTPNEELYELLFFAQRANTGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSH 296 (396)
T ss_pred ceeeeEEecChHHHHHHHHHHHHhhcCCCCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCC
Confidence 455666654 444444311 345556666666666654
Q ss_pred ------------cCceeEEEEecccHHHHHHHHHHHHCCc----------EEeec---------------CCCCCEEEEE
Q psy11784 202 ------------LHIFWCLILLSITYYLYRYTRRMKEAKI----------IVANE---------------GEYGNVLLFL 244 (284)
Q Consensus 202 ------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv----------~~~~~---------------~~~~~~lr~~ 244 (284)
.|.|+++++... +.+.+|.+.|.--.+ +..|. +..++.+|++
T Consensus 297 p~he~~~rq~~g~gg~~Sf~l~~~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlS 375 (396)
T COG0626 297 PGHELAKRQMTGYGGLFSFELKNE-EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLS 375 (396)
T ss_pred CcHHHHHHhcCCCceEEEEEeCCh-HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEE
Confidence 567888888633 556667666542221 11110 1134678885
Q ss_pred cCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 245 PAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 245 p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.-+ |+++.+++-|+++++.+
T Consensus 376 VGl----Ed~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 376 VGL----EDVEDLIADLEQALAKA 395 (396)
T ss_pred ecC----CCHHHHHHHHHHHHHhh
Confidence 433 66777777777777653
No 341
>KOG2862|consensus
Probab=98.20 E-value=0.00017 Score=63.44 Aligned_cols=180 Identities=13% Similarity=0.133 Sum_probs=118.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.+.++. ..+|.+--.-++.|+.. +.++..-++|++|+++|++|-|-+ +| |. -|.++.+|+.--..
T Consensus 131 le~i~~~lsqh~--p~~vfv~hgdsSTgV~q---~~~~~~g~lc~k~~~lllVD~VaS-lg--gt-~F~mDewgVDvayt 201 (385)
T KOG2862|consen 131 LEEITEKLSQHK--PKAVFVTHGDSSTGVLQ---DLLAISGELCHKHEALLLVDTVAS-LG--GT-EFEMDEWGVDVAYT 201 (385)
T ss_pred HHHHHHHHHhcC--CceEEEEecCccccccc---hHHHHHHHHhhcCCeEEEEechhh-cC--Cc-cceehhhcccEEEe
Confidence 677888887544 34455544444556544 346778899999999999999987 33 33 46777777644333
Q ss_pred EecccccCCcceeEEEecHHHHHhchh-----------------------------------------------------
Q psy11784 157 TVGKPMGNGMPIGAVITSRKIAESLNC----------------------------------------------------- 183 (284)
Q Consensus 157 ~~sK~l~~G~p~gav~~~~~i~~~~~~----------------------------------------------------- 183 (284)
---|+|++--.++-+..++..++.++.
T Consensus 202 gSQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~ 281 (385)
T KOG2862|consen 202 GSQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLE 281 (385)
T ss_pred cchhhcCCCCCcceeecCHHHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHH
Confidence 445999862224447788888887765
Q ss_pred --hhhHHHHHHHHHHHHHhccCcee-------------EEEEecccHHHHHHHHHHHHCCcEEeecC---CCCCEEEEEc
Q psy11784 184 --LDDNRPSGKYLVRPLGINLHIFW-------------CLILLSITYYLYRYTRRMKEAKIIVANEG---EYGNVLLFLP 245 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~~G~~~-------------~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~---~~~~~lr~~p 245 (284)
.++-++++++++..|+++ |+-. ++.. |...+..+++..+++++.+...++ ..+.++||-.
T Consensus 282 ~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~v-p~gvDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl 359 (385)
T KOG2862|consen 282 NSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKV-PYGVDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGL 359 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeec-CCCCCHHHHHHHHHHhcCEEeccccCCCcccEEEEEE
Confidence 235667888888888884 4422 1111 445567889999998855444332 2356888753
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHH
Q psy11784 246 -AMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 246 -~l~~t~~~id~~~~~l~~~l~~ 267 (284)
.-+-+-+-|+..++.|..++.+
T Consensus 360 ~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 360 LGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred eeccCCcHHHHHHHHHHHHHHhh
Confidence 2234677888888888877754
No 342
>PLN02368 alanine transaminase
Probab=98.19 E-value=3.3e-05 Score=72.15 Aligned_cols=104 Identities=15% Similarity=0.092 Sum_probs=69.5
Q ss_pred HHHHHHHHHhc---CCCee-EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC-cccccccc--
Q psy11784 77 AQAARNIMEAH---RDNIA-TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS-HFWAFQTQ-- 149 (284)
Q Consensus 77 ~~~l~~~i~~~---~~~va-avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~-~~~a~~~~-- 149 (284)
.+.+++.+... ..++. .++..| ++-.|. +.+++.+++|.++|++||+++|.||+|..+-..|. .+.+....
T Consensus 194 ~~~le~~i~~~~~~~~~~k~l~l~nP-~NPTG~-v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~ 271 (407)
T PLN02368 194 VNNLRQSVAQARSKGITVRAMVIINP-GNPTGQ-CLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLM 271 (407)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEECC-CCCCCc-cCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHh
Confidence 57777777521 12455 455667 555675 56899999999999999999999999987643331 11111110
Q ss_pred CC------CCcEE---Eeccccc--CCcceeEEEe---cHHHHHhch
Q psy11784 150 GA------VPDII---TVGKPMG--NGMPIGAVIT---SRKIAESLN 182 (284)
Q Consensus 150 g~------~pDiv---~~sK~l~--~G~p~gav~~---~~~i~~~~~ 182 (284)
++ .+.++ +|||++. .|+++|++++ ++++++.+.
T Consensus 272 ~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~ 318 (407)
T PLN02368 272 DMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIY 318 (407)
T ss_pred hhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHH
Confidence 11 12333 5799984 6999999994 777776654
No 343
>KOG0053|consensus
Probab=98.18 E-value=0.00013 Score=66.98 Aligned_cols=93 Identities=16% Similarity=0.158 Sum_probs=65.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
++.+++.++ +++-+|.+|..-+.-..++. +++|+++|+++|+++|+|+...+. .-++....-.|||
T Consensus 152 ~~~~~~~i~---~~t~~V~~ESPsNPll~v~D----I~~l~~la~~~g~~vvVDnTf~~p-------~~~~pL~lGADIV 217 (409)
T KOG0053|consen 152 LKKILKAIK---ENTKAVFLESPSNPLLKVPD----IEKLARLAHKYGFLVVVDNTFGSP-------YNQDPLPLGADIV 217 (409)
T ss_pred HHHHHHhhc---cCceEEEEECCCCCcccccc----HHHHHHHHhhCCCEEEEeCCcCcc-------cccChhhcCCCEE
Confidence 344555444 47999999987666566666 999999999999999999977543 2233334448999
Q ss_pred Ee--cccccCC--cceeEEEec-HHHHHhchh
Q psy11784 157 TV--GKPMGNG--MPIGAVITS-RKIAESLNC 183 (284)
Q Consensus 157 ~~--sK~l~~G--~p~gav~~~-~~i~~~~~~ 183 (284)
+- .|-++|. +-.|.++.+ ++....+..
T Consensus 218 ~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~ 249 (409)
T KOG0053|consen 218 VHSATKYIGGHSDVIGGSVVLNSEELASRLKF 249 (409)
T ss_pred EEeeeeeecCCcceeeeEEecCcHHHHHHHHH
Confidence 65 5999984 455666664 666655543
No 344
>KOG0258|consensus
Probab=98.18 E-value=6.8e-05 Score=67.72 Aligned_cols=186 Identities=17% Similarity=0.200 Sum_probs=116.1
Q ss_pred HHHHHHHHHhcCCC---eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccc----
Q psy11784 77 AQAARNIMEAHRDN---IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQT---- 148 (284)
Q Consensus 77 ~~~l~~~i~~~~~~---vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~---- 148 (284)
.++|++.++....+ -+.||+.|..-. | .+.+++-+++|...|.++|++|+.||||.- ..-.|+.|+++..
T Consensus 200 ~~el~~~~~eA~k~i~~r~lvvINPGNPT-G-qvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~e 277 (475)
T KOG0258|consen 200 VAELERSVDEARKGINPRALVVINPGNPT-G-QVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHE 277 (475)
T ss_pred HHHHHHHHHHHhccCCceEEEEECCCCcc-c-hhhcHHHHHHHHHHHHHcCeEEechHHHHhhccCCCcchHhHHHHHHH
Confidence 67788877743333 578889995443 3 367899999999999999999999999863 2234433555432
Q ss_pred cC-CCCcE------EEecccccC--CcceeEEEe---cHHHHHhchh---------------------------------
Q psy11784 149 QG-AVPDI------ITVGKPMGN--GMPIGAVIT---SRKIAESLNC--------------------------------- 183 (284)
Q Consensus 149 ~g-~~pDi------v~~sK~l~~--G~p~gav~~---~~~i~~~~~~--------------------------------- 183 (284)
.| -.||- -..||+.-| |.+-|++-. .+++.+.+.+
T Consensus 278 mg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~ 357 (475)
T KOG0258|consen 278 MGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLF 357 (475)
T ss_pred hcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhh
Confidence 22 23432 245888875 566666553 3454444333
Q ss_pred -------hhhHHHHHHHHHHHHHhc--------cCceeEEEEe--ccc--HH--------HHHHHHHHHH-CCcEEeecC
Q psy11784 184 -------LDDNRPSGKYLVRPLGIN--------LHIFWCLILL--SIT--YY--------LYRYTRRMKE-AKIIVANEG 235 (284)
Q Consensus 184 -------l~~~~~~~~~l~~~L~~~--------~G~~~~i~~~--~~~--~~--------~~~~~~~l~~-~Gv~~~~~~ 235 (284)
++.++.+.+.+.+.++++ .|.|+.+.-. |.. +. ..-.|.+|++ -||-+.|++
T Consensus 358 ~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGS 437 (475)
T KOG0258|consen 358 SSEKDGILSSLRSRAKLTEDAFNSLEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGS 437 (475)
T ss_pred hhhhHhHHHHHHHHhHHHHHHHhhcCceeeccCccceeecccccCCHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCC
Confidence 446777888888888887 6777766533 211 01 1234566665 599999986
Q ss_pred CCC-----CEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 236 EYG-----NVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 236 ~~~-----~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
-++ -++|.+ ...+. + +.++++.++=++..
T Consensus 438 GFGQ~~GtyH~R~T---iLp~~-~-~~i~~~~~fH~~f~ 471 (475)
T KOG0258|consen 438 GFGQKEGTYHFRTT---ILPPG-L-EIIEKFKKFHAEFM 471 (475)
T ss_pred CCCCCCceeEEEEe---ecCch-h-HHHHHHHHHHHHHH
Confidence 544 256643 11222 4 67777776655543
No 345
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=98.11 E-value=0.00015 Score=66.30 Aligned_cols=140 Identities=11% Similarity=0.084 Sum_probs=90.3
Q ss_pred HHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh------------
Q psy11784 118 DYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC------------ 183 (284)
Q Consensus 118 ~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~------------ 183 (284)
++++.+++++++|=|++ +|- . ..-.+.+ |++++| |.+| -..+|.+..+++..+.+..
T Consensus 149 ~l~~~~~~l~iVDavss-~g~--~-~id~~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~~~~~~~~~~~~~~~~~~~ 219 (349)
T TIGR01364 149 ELPDVKNAPLVADMSSN-ILS--R-PIDVSKF----GLIYAGAQKNIG-PAGLTVVIVRKDLLGRASRITPSMLNYKIHA 219 (349)
T ss_pred eecccCCCeEEEEcccc-ccC--c-cCCHHHc----cEEEEecccccC-CCceEEEEECHHHHhhcccCCCCcchHHHHH
Confidence 67888999999999987 321 1 1222222 466665 9884 2238899999988764421
Q ss_pred ---------------------------------hhhHHHHHHHHHHHHHhccCceeE-----------EEEe-cccHHHH
Q psy11784 184 ---------------------------------LDDNRPSGKYLVRPLGINLHIFWC-----------LILL-SITYYLY 218 (284)
Q Consensus 184 ---------------------------------l~~~~~~~~~l~~~L~~~~G~~~~-----------i~~~-~~~~~~~ 218 (284)
.++.+++.+++++.|+++.|+..- +.+. +......
T Consensus 220 ~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~~~~~ 299 (349)
T TIGR01364 220 ENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNEELEK 299 (349)
T ss_pred hcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCChhHhH
Confidence 114456667777777775233111 1111 2112235
Q ss_pred HHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 219 RYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 219 ~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
++.+.+.++|+.+.++....+.+|+++...+|++|||.+++.|+++++
T Consensus 300 ~~~~~~~~~Gi~~~~~~~~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 300 RFLKEAEERGLVSLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred HHHHHHHHCCCcccCCccccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 666788899995554422246899999999999999999999998654
No 346
>KOG3846|consensus
Probab=98.10 E-value=0.00015 Score=63.66 Aligned_cols=178 Identities=18% Similarity=0.166 Sum_probs=115.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++-+.|++.++++|.|++..||--.|.... +.+|-..-...|+++-+|=+|+ +|..- .....+|+ |+.
T Consensus 201 teDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd----i~aIT~Agq~kgc~VGfDLAHA-vgNVp---L~LHdWgV--DFA 270 (465)
T KOG3846|consen 201 TEDILDTIEKNGDEIALVCFSGVQYYTGQYFD----IGAITFAGQFKGCLVGFDLAHA-VGNVP---LQLHDWGV--DFA 270 (465)
T ss_pred HHHHHHHHHhcCCeEEEEEeecceeecccccc----hhhhhhcccCCCcEechhhhhh-hcCCc---eEEeecCC--ceE
Confidence 45666677778888999999999988887665 6677655556699999998886 43321 12223443 444
Q ss_pred E--ecccccCCc-ceeEEEecHHHHHh-chh-------------------------------------------------
Q psy11784 157 T--VGKPMGNGM-PIGAVITSRKIAES-LNC------------------------------------------------- 183 (284)
Q Consensus 157 ~--~sK~l~~G~-p~gav~~~~~i~~~-~~~------------------------------------------------- 183 (284)
| --|-+..|- .+|.....++.... ...
T Consensus 271 CWCSYKYlnaGaGgIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~ 350 (465)
T KOG3846|consen 271 CWCSYKYLNAGAGGIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFA 350 (465)
T ss_pred EEeeecccccCCCccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHH
Confidence 3 336554331 34444443322211 110
Q ss_pred ---hhhHHHHHHHHHHHHHhc----------------------------cCceeEEEEecccHHHHHHHHHHHHCCcEEe
Q psy11784 184 ---LDDNRPSGKYLVRPLGIN----------------------------LHIFWCLILLSITYYLYRYTRRMKEAKIIVA 232 (284)
Q Consensus 184 ---l~~~~~~~~~l~~~L~~~----------------------------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~ 232 (284)
++.+++++-+|..-|..+ .|.-+.+.+. .....+.++|.++|+++.
T Consensus 351 q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fs---sp~~~vfqeL~krGv~~D 427 (465)
T KOG3846|consen 351 QFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFS---SPTPKVFQELHKRGVIGD 427 (465)
T ss_pred HhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEEEEeC---CCchHHHHHHHHcCeecc
Confidence 345666665555555444 2333333332 124678999999999997
Q ss_pred ecCCCCCEEEEEc-CCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 233 NEGEYGNVLLFLP-AMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 233 ~~~~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
. ..+|+||+.| |+..|-.|+-.+++.|.++++.++
T Consensus 428 k--R~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 428 K--RRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred c--cCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 5 3469999999 899999999999999999988764
No 347
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=98.08 E-value=0.00017 Score=66.37 Aligned_cols=133 Identities=12% Similarity=0.043 Sum_probs=87.7
Q ss_pred hCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh-----------------
Q psy11784 123 IGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC----------------- 183 (284)
Q Consensus 123 ~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~----------------- 183 (284)
||+++|+|=|++ +|- . ..-.+.+ |++++| |.+| -..+|.+.++++..+.+..
T Consensus 165 ~g~l~vVDavss-~g~--~-~idv~~~----d~~~~ssqK~lg-P~Glg~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~ 235 (360)
T PRK05355 165 GDVPLVADMSSD-ILS--R-PIDVSKF----GLIYAGAQKNIG-PAGLTIVIVREDLLGRALPSIPSMLDYKTHADNDSM 235 (360)
T ss_pred CCCcEEEEcCcc-ccC--c-cCCHHHc----cEEEEecccccc-CCceEEEEECHHHHhhcccCCChHHHHHHHHhcCCc
Confidence 899999999987 321 1 1222222 477665 9884 2238899999988755321
Q ss_pred ---------------h-------------hhHHHHHHHHHHHHHhccCce-------------eEEEEecccHHHHHHHH
Q psy11784 184 ---------------L-------------DDNRPSGKYLVRPLGINLHIF-------------WCLILLSITYYLYRYTR 222 (284)
Q Consensus 184 ---------------l-------------~~~~~~~~~l~~~L~~~~G~~-------------~~i~~~~~~~~~~~~~~ 222 (284)
+ ++.+++.+++++.|+++ |++ +.+.+ +......++..
T Consensus 236 ~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~-~~~~~~~~~~~rs~~v~sf~~-~~~~~~~~~~~ 313 (360)
T PRK05355 236 YNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSS-DFYRNPVAPEDRSRMNVPFTL-ADEELDKKFLA 313 (360)
T ss_pred cCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC-CCcccCCChhhcCCcEEEEEc-CChHHHHHHHH
Confidence 1 14455667777777764 321 22222 22223356767
Q ss_pred HHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 223 RMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 223 ~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.+.++|+.+.++....+.+|+++....|.+|||.+++.|++++.
T Consensus 314 ~~~~~Gi~~~~~~~~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 314 EAKAAGLVGLKGHRSVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred HHHHCCCcccCCCCccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 88899999854432247899999999999999999999998764
No 348
>PLN02271 serine hydroxymethyltransferase
Probab=98.07 E-value=0.0007 Score=64.93 Aligned_cols=178 Identities=12% Similarity=0.050 Sum_probs=104.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+++++.... .+...||+...... ...+ +++++++|+++|++|++|-+|+ .|-.....+. ... ...|++
T Consensus 287 yd~lek~a~~--~rPKLII~g~Sayp--r~~D----~~~i~eIAdevGA~LmvD~AH~-aGLIa~g~~~-sP~-~~aDvv 355 (586)
T PLN02271 287 YDKLEEKALD--FRPKILICGGSSYP--REWD----YARFRQIADKCGAVLMCDMAHI-SGLVAAKECV-NPF-DYCDIV 355 (586)
T ss_pred HHHHHHHhhh--cCCeEEEECchhcc--CcCC----HHHHHHHHHHcCCEEEEECccc-ccccccCcCC-CCC-cCCcEE
Confidence 5677775442 34666777432111 2233 8899999999999999999998 2222210110 111 136888
Q ss_pred Eec--ccccCCcceeEEEecHH--------------------HHHhchh-------------------------------
Q psy11784 157 TVG--KPMGNGMPIGAVITSRK--------------------IAESLNC------------------------------- 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~--------------------i~~~~~~------------------------------- 183 (284)
+.+ |+|.|--. |.++++++ +.+.+..
T Consensus 356 t~TTHKtLrGPrG-G~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk 434 (586)
T PLN02271 356 TSTTHKSLRGPRG-GIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYK 434 (586)
T ss_pred EeCCcccCCCCCc-eEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHH
Confidence 764 99976211 55555543 3222221
Q ss_pred --hhhHHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-------CCCCEEEEEc
Q psy11784 184 --LDDNRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-------EYGNVLLFLP 245 (284)
Q Consensus 184 --l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-------~~~~~lr~~p 245 (284)
.+++.++.+.|.+.|.+. ...++.+++.+.........+.|-+-||.+.... ...+.||+-.
T Consensus 435 ~Ya~QVv~NAkaLA~~L~~~G~~vv~ggTdnHlvLvDl~~~g~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT 514 (586)
T PLN02271 435 AYMQQVKKNAQALASALLRRKCRLVTGGTDNHLLLWDLTTLGLTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGT 514 (586)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCeEeeCCCCcceeeecCcccCCCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccC
Confidence 236667777788888764 2224445553322235555666667799885321 1234577765
Q ss_pred CCC----CCHHHHHHHHHHHHHHHH
Q psy11784 246 AMC----LTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 246 ~l~----~t~~~id~~~~~l~~~l~ 266 (284)
|.. ..++|++++.+.+.++++
T Consensus 515 ~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 515 PAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred HHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 544 467899998888888876
No 349
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=98.06 E-value=0.00095 Score=61.33 Aligned_cols=232 Identities=20% Similarity=0.215 Sum_probs=135.2
Q ss_pred HHHHHHHcc-----CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 7 ALQLARAYT-----GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 7 AlklAr~~~-----~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
.|-+.|+|+ +++.++....|=||.--.+.+..+.+. ..++..+ .+.. | +++|+
T Consensus 141 Gll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~V----------V~V~~~~--~G~V--D--------lddLk 198 (496)
T COG1003 141 GLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKV----------VVVKCDE--NGNV--D--------LDDLR 198 (496)
T ss_pred HHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCceE----------EEEecCC--CCCc--c--------HHHHH
Confidence 456667774 356677789999998766665544321 1122111 1110 1 67777
Q ss_pred HHHHhcCCCeeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEecc----cccCccccCccccccccCCCCcEE
Q psy11784 82 NIMEAHRDNIATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI----QCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 82 ~~i~~~~~~vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
+... +++||+++ -| +.-|. =.+-+++|+++.+++|.+|..|-+ +-|.-|-|..++-..|+++.-
T Consensus 199 ~k~~---~~~AalMiTnP--sT~Gv---FE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlNLHK--- 267 (496)
T COG1003 199 AKAE---DNLAALMITNP--STLGV---FEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLNLHK--- 267 (496)
T ss_pred HHhc---cceeEEEeccC--ccccc---chhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEeeccc---
Confidence 7665 66877755 45 22332 234488999999999999999975 334444454211111222110
Q ss_pred EecccccCC-cceeEEEecHHHHHhchh-----------------------------------------------hh---
Q psy11784 157 TVGKPMGNG-MPIGAVITSRKIAESLNC-----------------------------------------------LD--- 185 (284)
Q Consensus 157 ~~sK~l~~G-~p~gav~~~~~i~~~~~~-----------------------------------------------l~--- 185 (284)
||+-.-||| -..|-+.+++++...+.. ++
T Consensus 268 TF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~as 347 (496)
T COG1003 268 TFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQAS 347 (496)
T ss_pred ccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHH
Confidence 222222232 223333334333322210 22
Q ss_pred -hHHHHHHHHHHHHHhc-----cCc-eeEEEEe--------cccHHHHHHHHHHHHCCcEEeecC-C--CCCEEEEEcCC
Q psy11784 186 -DNRPSGKYLVRPLGIN-----LHI-FWCLILL--------SITYYLYRYTRRMKEAKIIVANEG-E--YGNVLLFLPAM 247 (284)
Q Consensus 186 -~~~~~~~~l~~~L~~~-----~G~-~~~i~~~--------~~~~~~~~~~~~l~~~Gv~~~~~~-~--~~~~lr~~p~l 247 (284)
..--+..|+..+|+.- .|. ...-+++ .....+..++++|++.|+..-... | -.+.+.+-|.=
T Consensus 348 e~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~GfHaPT~~FPliV~~tLMIEPTE 427 (496)
T COG1003 348 EVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGFHAPTMYFPLIVAGTLMIEPTE 427 (496)
T ss_pred HHHHHhHHHHHHHhhhcCccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHHhcCCCCCcccCccccccceeecCCC
Confidence 2334567888888754 222 2444444 112357889999999999865331 1 23678899999
Q ss_pred CCCHHHHHHHHHHHHHHHHHHhhc
Q psy11784 248 CLTTENVLFIVSTLNRIFTSLQMD 271 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~~~~~ 271 (284)
+-|++++|.+++++.++.++..+.
T Consensus 428 sEsk~eLDrf~dami~I~~Ea~~~ 451 (496)
T COG1003 428 SESKEELDRFIDAMIAIREEADAV 451 (496)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999999887654
No 350
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=98.00 E-value=0.00045 Score=63.96 Aligned_cols=170 Identities=18% Similarity=0.206 Sum_probs=98.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.++++++.+++++++ ||+.+. . .+.+-+ +++++++|++.|++|++|=.|. |+=-.| .+ ...+.. .|+
T Consensus 158 ~d~l~~~a~~~kPkl--Ii~G~S--~---y~~~~d-~~~~reIad~vga~l~~D~sH~~GLIa~g--~~-~~P~~~-ADv 225 (399)
T PF00464_consen 158 YDELEKLAKEHKPKL--IICGAS--S---YPRPID-FKRFREIADEVGAYLMADISHIAGLIAGG--LF-PNPFPY-ADV 225 (399)
T ss_dssp HHHHHHHHHHH--SE--EEEE-S--S---TSS----HHHHHHHHHHTT-EEEEE-TTTHHHHHTT--SS---GCCT-SSE
T ss_pred HHHHHHHHhhcCCCE--EEECch--h---ccCccC-HHHHHHHHHhcCcEEEecccccccceehh--ee-cCcccc-ceE
Confidence 678888888666653 444331 1 122223 6999999999999999999987 441112 11 123333 799
Q ss_pred EEec--ccccCCcceeEEEec--------------HHHHHhchh---------------------------------hhh
Q psy11784 156 ITVG--KPMGNGMPIGAVITS--------------RKIAESLNC---------------------------------LDD 186 (284)
Q Consensus 156 v~~s--K~l~~G~p~gav~~~--------------~~i~~~~~~---------------------------------l~~ 186 (284)
+|.+ |.|.|- .-|.++++ +++.+.+.. .++
T Consensus 226 vt~sThKtl~GP-rggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~q 304 (399)
T PF00464_consen 226 VTGSTHKTLRGP-RGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQ 304 (399)
T ss_dssp EEEESSGGG-SS-S-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred EEeecccccccc-CceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHH
Confidence 9765 999861 23666677 677766654 236
Q ss_pred HHHHHHHHHHHHHhc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeecC-C------CCCEEEEEcCCC--
Q psy11784 187 NRPSGKYLVRPLGIN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANEG-E------YGNVLLFLPAMC-- 248 (284)
Q Consensus 187 ~~~~~~~l~~~L~~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~-~------~~~~lr~~p~l~-- 248 (284)
+.++++.|.+.|++. ...++.+++.+.........+.|.+.||++.... | ..+.||+-.+..
T Consensus 305 Vv~NAk~La~~L~~~G~~v~~ggTd~H~vlvd~~~~~~~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~ 384 (399)
T PF00464_consen 305 VVKNAKALAEALQERGFKVVTGGTDNHQVLVDLRSFGIDGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTR 384 (399)
T ss_dssp HHHHHHHHHHHHHHTT-EEGGGS-SSSEEEEEGGGGTS-HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHH
T ss_pred HHHHHHHHHHHHhhCCcEEEECCCCCCeEEEEecccccchHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHh
Confidence 677778888888875 2335566664333356677778889999986421 1 235789875433
Q ss_pred --CCHHHHHHHHH
Q psy11784 249 --LTTENVLFIVS 259 (284)
Q Consensus 249 --~t~~~id~~~~ 259 (284)
..++|+.++.+
T Consensus 385 rG~~e~dm~~iA~ 397 (399)
T PF00464_consen 385 RGMKEEDMKEIAE 397 (399)
T ss_dssp TT--HHHHHHHHH
T ss_pred CCCCHHHHHHHHh
Confidence 35666665544
No 351
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=97.99 E-value=0.00054 Score=61.51 Aligned_cols=56 Identities=7% Similarity=0.100 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcCCC-eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 77 AQAARNIMEAHRDN-IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 77 ~~~l~~~i~~~~~~-vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
++.|+++|+..+.+ |.-|+.--..+..|..+.+-+=+++++++|++||+.+++|-.
T Consensus 171 ~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~ 227 (471)
T COG3033 171 LEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAA 227 (471)
T ss_pred HHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehh
Confidence 78999999966655 655544433444566678999999999999999999999965
No 352
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.91 E-value=0.00051 Score=70.44 Aligned_cols=158 Identities=13% Similarity=0.037 Sum_probs=101.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--cc---cc-
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KP---MG- 163 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~---l~- 163 (284)
+++++++ .+.+..|.+.+ +++|.++|+++|+++++|=.+...+ .++ ..-.+-.|+++.+ |. +|
T Consensus 206 ~~~~vlv-q~p~~~G~i~d----~~~i~~~ah~~Gal~~vda~~~Al~-~l~-----~pge~GaDi~vgs~qkfg~P~g~ 274 (954)
T PRK05367 206 DVFGVLL-QYPGTSGEVRD----YTALIAAAHARGALVAVAADLLALT-LLT-----PPGEMGADIAVGSAQRFGVPMGF 274 (954)
T ss_pred cEEEEEE-ecCCCCeeecc----HHHHHHHHHHcCCEEEEEehhhhcc-CCC-----ChhhcCCCEEEeeCcccCCCCCC
Confidence 4666543 44677888876 9999999999999999997442111 011 0011234665432 32 12
Q ss_pred CCcceeEEEecHHHHHhchh---------------------------------------------------------h--
Q psy11784 164 NGMPIGAVITSRKIAESLNC---------------------------------------------------------L-- 184 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~~~---------------------------------------------------------l-- 184 (284)
||--.|++.+++++.+.+.. +
T Consensus 275 GGP~aGflavr~~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~ 354 (954)
T PRK05367 275 GGPHAAYFAVRDAYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKA 354 (954)
T ss_pred CCCCEEEEEECHHHHhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHH
Confidence 22236666777776655432 1
Q ss_pred --hhHHHHHHHHHHHHHhccCc-------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 185 --DDNRPSGKYLVRPLGINLHI-------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 185 --~~~~~~~~~l~~~L~~~~G~-------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
+++..+..++.++|+.. |+ +-.+.+. ......++.++|.++||.+... ..+.+|++|.-+.|++|||
T Consensus 355 Ia~~~~~la~~l~~~L~~~-G~~~~~~~~f~~~~~~-~~~~~~~i~~~l~~~gi~~~~~--~~~~l~is~~e~~t~~did 430 (954)
T PRK05367 355 IARRVHRLAAILAAGLRAL-GLEVVHDSFFDTLTVE-VGGDAAAVLARALAAGINLRRV--DDDHVGISLDETTTREDLA 430 (954)
T ss_pred HHHHHHHHHHHHHHHHHhc-CcccCCCCCCCeEEEe-CCCCHHHHHHHHHHCCceeccc--cCCEEEEEecccCCHHHHH
Confidence 24556677777777653 21 1112221 1135778999999999999642 2578999999999999999
Q ss_pred HHHHHHH
Q psy11784 256 FIVSTLN 262 (284)
Q Consensus 256 ~~~~~l~ 262 (284)
.+++.|.
T Consensus 431 ~l~~~l~ 437 (954)
T PRK05367 431 ALLAVFG 437 (954)
T ss_pred HHHHHHc
Confidence 9999997
No 353
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=97.91 E-value=0.0012 Score=67.62 Aligned_cols=158 Identities=12% Similarity=0.035 Sum_probs=100.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccc---c-
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPM---G- 163 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l---~- 163 (284)
.+++++ -.+.+..|.+.+ +++|.++|+++|+++++ -++. ++-.+- -. .-.+-.|+++.+ |.+ |
T Consensus 234 ~v~~vl-vq~P~~~G~v~d----v~~I~~~ah~~GaL~iV-aad~-lal~~l--~~--pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 234 DVCGVL-VQYPATDGEVLD----YAEFVKNAHANGVKVVM-ATDL-LALTML--KP--PGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred ceEEEE-EecCCCCeEEcC----HHHHHHHHHHcCCEEEE-EECH-HHhcCC--CC--HhhccCcEEEECCCccccCCCC
Confidence 466665 234456788877 99999999999999999 2222 211110 00 112335776542 332 2
Q ss_pred CCcceeEEEecHHHHHhchh---------------------------------------------------------h--
Q psy11784 164 NGMPIGAVITSRKIAESLNC---------------------------------------------------------L-- 184 (284)
Q Consensus 164 ~G~p~gav~~~~~i~~~~~~---------------------------------------------------------l-- 184 (284)
||--.|++.++++..+.+.. +
T Consensus 303 GGP~aGflavr~~~~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~ 382 (993)
T PLN02414 303 GGPHAAFLATSQEYKRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKT 382 (993)
T ss_pred CCCCeeEEEECHHHHhhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHH
Confidence 34227788888877665431 1
Q ss_pred --hhHHHHHHHHHHHHHhccCc------ee-EEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHH
Q psy11784 185 --DDNRPSGKYLVRPLGINLHI------FW-CLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVL 255 (284)
Q Consensus 185 --~~~~~~~~~l~~~L~~~~G~------~~-~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id 255 (284)
+++.++..++.++|... |. ++ -+.+. . ....++.++|.++||.++... .+.+|+++....|++|||
T Consensus 383 Ia~ri~~la~~l~~~L~~~-G~~~~~~~~f~~vt~~-~-~~~~~v~~~L~~~gI~l~~~~--~~~lrvs~~e~~T~edId 457 (993)
T PLN02414 383 IAQRVHGLAGVFAAGLKKL-GFQVQSLPFFDTVKVK-C-SDADAIADAAAKVGINLRVVD--ANTVTVSFDETTTLEDVD 457 (993)
T ss_pred HHHHHHHHHHHHHHHHhhc-CCccCCCCCcCeEEEe-c-CCHHHHHHHHHHCCCeeEEec--CCeEEEEeeccCCHHHHH
Confidence 24556677777777663 31 11 11111 1 134779999999999887543 568999999999999999
Q ss_pred HHHHHHHH
Q psy11784 256 FIVSTLNR 263 (284)
Q Consensus 256 ~~~~~l~~ 263 (284)
.+++.|..
T Consensus 458 ~L~~~l~~ 465 (993)
T PLN02414 458 KLFKVFAG 465 (993)
T ss_pred HHHHHHcc
Confidence 99999963
No 354
>PLN02724 Molybdenum cofactor sulfurase
Probab=97.90 E-value=0.00089 Score=67.93 Aligned_cols=168 Identities=15% Similarity=0.069 Sum_probs=106.2
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--------CCEEEEecccccCccccCccccccccCCCCcEEEec--
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--------GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG-- 159 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--------g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s-- 159 (284)
.+..|.+--+.+..|.+.| ++.+..+++.. ++++++|=+|+ +| . ...+...+.+|++++|
T Consensus 192 ~t~LVa~~~vsN~tG~i~p----i~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~-~g---~--~piDv~~~~~Dfl~~S~H 261 (805)
T PLN02724 192 AYNLFAFPSECNFSGAKFP----LDLVKLIKDNQHSNFSKSGRWMVLLDAAKG-CG---T--SPPDLSRYPADFVVVSFY 261 (805)
T ss_pred CcceEEEEccccCCCCcCC----HHHHHHHHHhcccccccCcceEEEeehhhh-cC---C--CCCChhhcCCCEEEEecc
Confidence 3567777778888999888 66665555432 36899999886 33 2 2223334568999886
Q ss_pred ccccCCcceeEEEecHHHHHhchh--------------------------------------------------------
Q psy11784 160 KPMGNGMPIGAVITSRKIAESLNC-------------------------------------------------------- 183 (284)
Q Consensus 160 K~l~~G~p~gav~~~~~i~~~~~~-------------------------------------------------------- 183 (284)
|.+++-..+|+++++++..+.+..
T Consensus 262 K~~GgP~G~G~L~vr~~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~aal~~l~~ig~~~I 341 (805)
T PLN02724 262 KIFGYPTGLGALLVRRDAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRHGFKLLNRLTISAI 341 (805)
T ss_pred eeccCCCCceEEEEehhhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence 977643458888888876532210
Q ss_pred hhhHHHHHHHHHHHHHhcc-----------C------------ceeEEEEecc--cHH-HHHHHHHHHHCCcEEeecCC-
Q psy11784 184 LDDNRPSGKYLVRPLGINL-----------H------------IFWCLILLSI--TYY-LYRYTRRMKEAKIIVANEGE- 236 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~~-----------G------------~~~~i~~~~~--~~~-~~~~~~~l~~~Gv~~~~~~~- 236 (284)
.++.+++.+++.+.|+++. | .++.+.+... ... ...+...+-++||.++.+..
T Consensus 342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~~~gI~vR~G~~C 421 (805)
T PLN02724 342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLASLSGIQLRTGCFC 421 (805)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHHhcCcEEeecccc
Confidence 1256667777777777641 1 1222233211 011 22234344467888865421
Q ss_pred ------------------------------------CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 237 ------------------------------------YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 237 ------------------------------------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
..+.+|+++....|.+|||.+++.|++.+-.
T Consensus 422 a~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~~~ 488 (805)
T PLN02724 422 NPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSFVS 488 (805)
T ss_pred CchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHhhc
Confidence 0267999999999999999999999997743
No 355
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=97.88 E-value=0.0026 Score=58.51 Aligned_cols=170 Identities=17% Similarity=0.181 Sum_probs=99.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+++.+. +++.||++=.+.|.- . -+++|.++|++||+.||-|=+|+ +|-. +.-...|-.-|+.
T Consensus 103 ~~~~~~~i~---~~t~ai~~~h~~G~~---~----d~~~i~~~~~~~~i~lIeD~a~a-~g~~----~~g~~~G~~gd~~ 167 (363)
T PF01041_consen 103 PEALEKAIT---PKTKAILVVHLFGNP---A----DMDAIRAIARKHGIPLIEDAAQA-FGAR----YKGRPVGSFGDIA 167 (363)
T ss_dssp HHHHHHHHH---TTEEEEEEE-GGGB----------HHHHHHHHHHTT-EEEEE-TTT-TT-E----ETTEETTSSSSEE
T ss_pred HHHHHHHhc---cCccEEEEecCCCCc---c----cHHHHHHHHHHcCCcEEEccccc-cCce----eCCEeccCCCCce
Confidence 577888887 567888877777652 2 29999999999999999999997 3321 1112334445888
Q ss_pred Eec----ccccCCcceeEEEec-HHHHHhchh-------------------------------------h-------hhH
Q psy11784 157 TVG----KPMGNGMPIGAVITS-RKIAESLNC-------------------------------------L-------DDN 187 (284)
Q Consensus 157 ~~s----K~l~~G~p~gav~~~-~~i~~~~~~-------------------------------------l-------~~~ 187 (284)
+|| |.++.| -.|+++++ +++.+.+.. | ++=
T Consensus 168 ~fSf~~~K~i~~g-eGG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R 246 (363)
T PF01041_consen 168 IFSFHPTKIITTG-EGGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARR 246 (363)
T ss_dssp EEESSTTSSS-SS-S-EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHH
T ss_pred EecCCCCCCCcCC-CCeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHH
Confidence 886 888643 12777775 444443321 1 122
Q ss_pred HHHHHHHHHHHHhcc-------------CceeEEEEe-ccc--HHHHHHHHHHHHCCcEEeecCC--------C------
Q psy11784 188 RPSGKYLVRPLGINL-------------HIFWCLILL-SIT--YYLYRYTRRMKEAKIIVANEGE--------Y------ 237 (284)
Q Consensus 188 ~~~~~~l~~~L~~~~-------------G~~~~i~~~-~~~--~~~~~~~~~l~~~Gv~~~~~~~--------~------ 237 (284)
+++.+++.+.|.... ..++.+.+. +.. .....+.+.|.++||-+.+..+ .
T Consensus 247 ~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~ 326 (363)
T PF01041_consen 247 RENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYY 326 (363)
T ss_dssp HHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEE
T ss_pred HHHHHHHHHHHhcCCCcccccccccccccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHhcCcc
Confidence 344455555555541 122222222 221 2478899999999998875321 0
Q ss_pred -----C-------CEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 238 -----G-------NVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 238 -----~-------~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
+ ..|.+-.+...|+++++.+++.|+
T Consensus 327 ~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 327 APGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp ETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 0 134443445578999999988774
No 356
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=97.80 E-value=9.2e-05 Score=65.97 Aligned_cols=96 Identities=21% Similarity=0.201 Sum_probs=61.2
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCc----ccccccc
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSH----FWAFQTQ 149 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~----~~a~~~~ 149 (284)
.++|++.++. +...++.|.+|-.....|..++|.+.|++|+++|++||+.|.+| |- |.... +.....+
T Consensus 108 ~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmD----GA-Rl~~a~~~~~~~~~e~ 182 (290)
T PF01212_consen 108 PEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMD----GA-RLANAAAALGVSLAEI 182 (290)
T ss_dssp HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEE----ET-THHHHHCHHHHHHHHH
T ss_pred HHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEe----hh-hHHHhhhcccccHHHH
Confidence 6788888875 33569999999888777777889999999999999999999999 43 43210 0011111
Q ss_pred CCCCcEEEe--cccccCCcceeEEE-ecHHHHH
Q psy11784 150 GAVPDIITV--GKPMGNGMPIGAVI-TSRKIAE 179 (284)
Q Consensus 150 g~~pDiv~~--sK~l~~G~p~gav~-~~~~i~~ 179 (284)
----|++++ +|.++ .|.|+++ ++++.++
T Consensus 183 ~~~~D~v~~~~tK~~g--~~~Gavl~~~~~~i~ 213 (290)
T PF01212_consen 183 AAGADSVSFGGTKNGG--APGGAVLAGNKEFIA 213 (290)
T ss_dssp HTTSSEEEEETTSTT---SSSEEEEEESHHHHH
T ss_pred hhhCCEEEEEEEcccc--cccceEEEechHHHH
Confidence 134677765 46554 4555555 5777543
No 357
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=97.80 E-value=0.00081 Score=61.63 Aligned_cols=160 Identities=13% Similarity=0.052 Sum_probs=94.6
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEecccccCCcce
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPI 168 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G~p~ 168 (284)
+++..|.+--.-...|... .++++.||+++++|=+|+ +|-. ..-.+..++ ++..--|.+| -..+
T Consensus 137 ~~~~lV~~~h~~t~tG~~~---------~~i~~~~g~~~~VDa~qs-~g~~---~idv~~~~~--~~ss~~K~lG-P~G~ 200 (355)
T cd00611 137 PDAAYVHYCSNETIHGVEF---------DEVPDTGGVPLVADMSSN-ILSR---PIDVSKFGV--IYAGAQKNLG-PAGV 200 (355)
T ss_pred CCCCEEEEeCCcccccEEc---------ceecccCCCeEEEEcccc-ccCC---CCCHHHhCE--EEeecccccC-CCce
Confidence 3444454444444455542 256667999999999998 3211 122233332 2222347663 2348
Q ss_pred eEEEecHHHHHhchh--------------------------------h-------------hhHHHHHHHHHHHHHhccC
Q psy11784 169 GAVITSRKIAESLNC--------------------------------L-------------DDNRPSGKYLVRPLGINLH 203 (284)
Q Consensus 169 gav~~~~~i~~~~~~--------------------------------l-------------~~~~~~~~~l~~~L~~~~G 203 (284)
|.+++++++.+.+.. + ++.+++.+++++.|+++.|
T Consensus 201 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~g 280 (355)
T cd00611 201 TVVIVRKDLLGKARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNG 280 (355)
T ss_pred EEEEECHHHHhhcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCcc
Confidence 899999987754321 1 1445666777777776535
Q ss_pred ceeE-----------EEEe-cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 204 IFWC-----------LILL-SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 204 ~~~~-----------i~~~-~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
++.. +.+. +.......+...+.++|+...++....+.+|+++...+|++|||.+++.|+++
T Consensus 281 l~~~~~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 281 FYRGPVDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHRSVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ccccCCCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCcccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 4211 1111 11111244556778899984433222478999999999999999999999874
No 358
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=97.78 E-value=0.0014 Score=59.35 Aligned_cols=169 Identities=17% Similarity=0.171 Sum_probs=106.6
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccC------C
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQG------A 151 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g------~ 151 (284)
+.+-..|+..+.+...++-.+-.+..|. -++.+.|++|.++.++.|.+-++|=+|.||+. | .--+.++ .
T Consensus 160 ~~mla~L~~a~~~~vvLLH~CcHNPTG~-D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~-G---leeDa~~lR~~a~~ 234 (396)
T COG1448 160 DGMLADLKTAPEGSVVLLHGCCHNPTGI-DPTEEQWQELADLIKERGLIPFFDIAYQGFAD-G---LEEDAYALRLFAEV 234 (396)
T ss_pred HHHHHHHHhCCCCCEEEEecCCCCCCCC-CCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc-c---hHHHHHHHHHHHHh
Confidence 3333444444455444555556666775 46899999999999999999999999999964 3 1222222 2
Q ss_pred CCc-EE--EecccccC-CcceeEEEe---cHHHHHhchh-----------------------------------------
Q psy11784 152 VPD-II--TVGKPMGN-GMPIGAVIT---SRKIAESLNC----------------------------------------- 183 (284)
Q Consensus 152 ~pD-iv--~~sK~l~~-G~p~gav~~---~~~i~~~~~~----------------------------------------- 183 (284)
.|. +| .+||.+|= |-++|++.. +++..+.+..
T Consensus 235 ~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~M 314 (396)
T COG1448 235 GPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEM 314 (396)
T ss_pred CCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 233 34 47899984 556665443 4444443322
Q ss_pred hhhHHHHHHHHHHHHHhc------------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCC
Q psy11784 184 LDDNRPSGKYLVRPLGIN------------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLT 250 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~------------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t 250 (284)
.+++.++++.|.+.|++. .|+|.-.-+ ..+=+.+|+ +.||++... ++|-+ ..++
T Consensus 315 r~Ri~~mR~~lv~~L~~~~~~~~f~~i~~Q~GMFsy~Gl------s~~QV~rLree~~IY~v~s----GRi~v---aGl~ 381 (396)
T COG1448 315 RQRILEMRQALVDALKALGAPRNFDFIISQRGMFSYTGL------SPEQVDRLREEFGIYLVAS----GRINV---AGLN 381 (396)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccchHhhcCceeecCCC------CHHHHHHHHHhccEEEecC----Ceeee---ccCC
Confidence 337777788888888874 444432222 223344555 679999853 34433 3679
Q ss_pred HHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRI 264 (284)
Q Consensus 251 ~~~id~~~~~l~~~ 264 (284)
++.|+.+++.|.++
T Consensus 382 ~~ni~~va~ai~~v 395 (396)
T COG1448 382 TSNIDYVAKAIAAV 395 (396)
T ss_pred hhhHHHHHHHHHhh
Confidence 99999999998765
No 359
>PRK06434 cystathionine gamma-lyase; Validated
Probab=97.76 E-value=0.00099 Score=61.77 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=78.4
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccC-C-
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGN-G- 165 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~-G- 165 (284)
++.+|++|.+.+..+...+ +++|.++|++++ +++|.++.. +. .....+.-.|++++| |.++| |
T Consensus 148 ~tklv~~e~~snpt~~v~D----i~~I~~la~~~~--lvVD~t~~s-~~------~~~pl~~gaDivv~S~tK~i~G~~d 214 (384)
T PRK06434 148 NYDLIYAESITNPTLKVPD----IKNVSSFCHEND--VIVDATFAS-PY------NQNPLDLGADVVIHSATKYISGHSD 214 (384)
T ss_pred CeeEEEEEcCCCCCceeec----HHHHHHHHHHcC--eEEECCCCC-cc------cCCchhcCCCEEEeecccccCCCCC
Confidence 5788899987666666666 999999999999 466988631 11 222334568998876 88876 3
Q ss_pred cceeEEEe-cHHHHHhchh---------------------------hhhHHHHHHHHHHHHHhc----------------
Q psy11784 166 MPIGAVIT-SRKIAESLNC---------------------------LDDNRPSGKYLVRPLGIN---------------- 201 (284)
Q Consensus 166 ~p~gav~~-~~~i~~~~~~---------------------------l~~~~~~~~~l~~~L~~~---------------- 201 (284)
.-.|++++ ++++.+.+.. +++-.++...+.+.|+..
T Consensus 215 ~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~ 294 (384)
T PRK06434 215 VVMGVAGTNNKSIFNNLVERRKTLGSNPDPIQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKK 294 (384)
T ss_pred ceEEEEecCcHHHHHHHHHHHHhcCCCCCHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHH
Confidence 33466666 4455443321 335555666666666654
Q ss_pred ----cCceeEEEEecccHHHHHHHHHHH
Q psy11784 202 ----LHIFWCLILLSITYYLYRYTRRMK 225 (284)
Q Consensus 202 ----~G~~~~i~~~~~~~~~~~~~~~l~ 225 (284)
.|.|+.+++. ..+.+.+|.+.|.
T Consensus 295 ~~~g~g~~~sf~l~-~~~~~~~f~~~l~ 321 (384)
T PRK06434 295 VLRGFGGMLSFELR-SMEDVHKFIRNLE 321 (384)
T ss_pred hcCCCCceEEEEEC-CHHHHHHHHHhCC
Confidence 4678899985 3444556666554
No 360
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.74 E-value=0.0062 Score=55.51 Aligned_cols=178 Identities=13% Similarity=0.155 Sum_probs=111.3
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDi 155 (284)
.++++++..++++.+ || . |+...+-.--+++++++|++.|+.|++|=+|- |+=-.|. +. ..... .|+
T Consensus 155 yD~~~k~a~e~kPK~--ii----~--G~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~--~p-~P~~~-Adv 222 (413)
T COG0112 155 YDEVEKLAKEVKPKL--II----A--GGSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGV--HP-NPLPH-ADV 222 (413)
T ss_pred HHHHHHHHHHhCCCE--EE----E--CccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhccc--CC-CCCCc-cce
Confidence 577888887777763 11 1 22222233338999999999999999999885 4422222 11 11222 688
Q ss_pred EEe--cccccCCcceeEEEecH-HHHHhchh---------------------------------hhhHHHHHHHHHHHHH
Q psy11784 156 ITV--GKPMGNGMPIGAVITSR-KIAESLNC---------------------------------LDDNRPSGKYLVRPLG 199 (284)
Q Consensus 156 v~~--sK~l~~G~p~gav~~~~-~i~~~~~~---------------------------------l~~~~~~~~~l~~~L~ 199 (284)
||- -|.|-|. +-|.+++++ ++.+.+.. .+++.++++.|.+.|.
T Consensus 223 VTtTTHKTlrGP-rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~ 301 (413)
T COG0112 223 VTTTTHKTLRGP-RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALK 301 (413)
T ss_pred EeCCcccCCCCC-CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHH
Confidence 865 4999761 236677764 77776655 2366677778888887
Q ss_pred hc---------cCceeEEEEecccHHHHHHHHHHHHCCcEEeec-------CC-CCCEEEEEcCCC----CCHHHHHHHH
Q psy11784 200 IN---------LHIFWCLILLSITYYLYRYTRRMKEAKIIVANE-------GE-YGNVLLFLPAMC----LTTENVLFIV 258 (284)
Q Consensus 200 ~~---------~G~~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~-------~~-~~~~lr~~p~l~----~t~~~id~~~ 258 (284)
+. ...++.+++.+...........|-+-||.+... ++ ..+-||+-.|.. +.++|..++.
T Consensus 302 ~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia 381 (413)
T COG0112 302 ERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIA 381 (413)
T ss_pred HcCCeEecCCccceEEEEEcccCCCCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHH
Confidence 74 223455666432234555555666779988622 11 235688876655 4678888888
Q ss_pred HHHHHHHHH
Q psy11784 259 STLNRIFTS 267 (284)
Q Consensus 259 ~~l~~~l~~ 267 (284)
+.+.++++.
T Consensus 382 ~~I~~vl~~ 390 (413)
T COG0112 382 DLIADVLDG 390 (413)
T ss_pred HHHHHHHhc
Confidence 888888765
No 361
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=97.70 E-value=0.0065 Score=55.86 Aligned_cols=90 Identities=20% Similarity=0.197 Sum_probs=60.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
.+.+|+.|. +.+.|||.=-..|. ... +++|.++|++||+++|-|=+|+ +|-+- --...|-.-|+.
T Consensus 112 ~~~ie~aIt---~~tKAIipVhl~G~---~~d----m~~i~~la~~~~l~vIEDaAqa-~Ga~y----~gk~vGt~Gd~~ 176 (374)
T COG0399 112 PDLIEAAIT---PRTKAIIPVHLAGQ---PCD----MDAIMALAKRHGLPVIEDAAQA-HGATY----KGKKVGSFGDIG 176 (374)
T ss_pred HHHHHHHcc---cCCeEEEEehhccC---CCC----HHHHHHHHHHcCCeEEEEcchh-ccCee----cCcccccccceE
Confidence 577888886 44777775444553 333 9999999999999999999997 43221 112334456777
Q ss_pred Eec----ccccCCcceeEEEec-HHHHHhch
Q psy11784 157 TVG----KPMGNGMPIGAVITS-RKIAESLN 182 (284)
Q Consensus 157 ~~s----K~l~~G~p~gav~~~-~~i~~~~~ 182 (284)
+|| |.++.| --|+++++ +++.+.++
T Consensus 177 ~fSF~~~K~ittg-EGGav~tnd~ela~k~~ 206 (374)
T COG0399 177 AFSFHATKNLTTG-EGGAVVTNDEELAEKAR 206 (374)
T ss_pred EEEecCCCCcccc-CceEEEeCCHHHHHHHH
Confidence 775 888854 34788875 55555443
No 362
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=97.60 E-value=0.0082 Score=55.02 Aligned_cols=183 Identities=15% Similarity=0.095 Sum_probs=94.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc---cccCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF---QTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~---~~~g~~p 153 (284)
++.+|+.+++.+.+....++....+..|. -++-+.+|.++|++||++.|+.-+|+ . ..-+..-.. ...|..|
T Consensus 141 ~~~ie~~i~~~G~~~iLcvltttscfapr---~~D~i~~IakiC~~~~IPhlvNnAYg-v-Q~~~~~~~i~~a~~~GRvd 215 (389)
T PF05889_consen 141 LEAIEAKIEELGADNILCVLTTTSCFAPR---LPDDIEEIAKICKEYDIPHLVNNAYG-V-QSSKCMHLIQQAWRVGRVD 215 (389)
T ss_dssp HHHHHHHHHHHCGGGEEEEEEESSTTTTB-------HHHHHHHHHHHT--EEEEGTTT-T-T-HHHHHHHHHHHHHSTCS
T ss_pred HHHHHHHHHHhCCCCeEEEEEecCccCCC---CCccHHHHHHHHHHcCCceEEccchh-h-hHHHHHHHHHHHHhcCCcc
Confidence 56778888766666444444444444333 33569999999999999999999985 4 000000000 0112222
Q ss_pred c-EEEecccccCCcce-eEEEe--cHHHHHhchh-----------------------------hhhHHHHHHHHHHHHHh
Q psy11784 154 D-IITVGKPMGNGMPI-GAVIT--SRKIAESLNC-----------------------------LDDNRPSGKYLVRPLGI 200 (284)
Q Consensus 154 D-iv~~sK~l~~G~p~-gav~~--~~~i~~~~~~-----------------------------l~~~~~~~~~l~~~L~~ 200 (284)
- +-.+.|-+=- |+ |++++ .+..++.+.. +....+.=.++.++|++
T Consensus 216 a~vqS~dkNF~V--PvGgai~As~~~~~i~~vs~~YpGRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~ 293 (389)
T PF05889_consen 216 AFVQSTDKNFMV--PVGGAIMASFDPSGILAVSKEYPGRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKK 293 (389)
T ss_dssp EEEEEHHHHHCE--ESSHEEEEESSHHHHHHHHHTSHSHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeecCCCEEe--cCCCcEEEecCHHHHHHHHHHhhhhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 1123333310 11 22222 2334444332 22344445566666666
Q ss_pred c-------------cCceeEEEEec----ccHHHHHHHHHHHHCCcEEe----ecCC---------CCCEEEEEcCCCCC
Q psy11784 201 N-------------LHIFWCLILLS----ITYYLYRYTRRMKEAKIIVA----NEGE---------YGNVLLFLPAMCLT 250 (284)
Q Consensus 201 ~-------------~G~~~~i~~~~----~~~~~~~~~~~l~~~Gv~~~----~~~~---------~~~~lr~~p~l~~t 250 (284)
+ .-..+++++.. .......+...|+.+||--. +... ...++-+.-.+-++
T Consensus 294 ~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~ 373 (389)
T PF05889_consen 294 WAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMT 373 (389)
T ss_dssp HHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--
T ss_pred HHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCC
Confidence 5 22344555541 11346788899999976422 1111 11577887788999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLNRIFT 266 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~ 266 (284)
++|+|.++++|+++++
T Consensus 374 ~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 374 REEVDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999999874
No 363
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=97.55 E-value=0.0072 Score=56.43 Aligned_cols=157 Identities=18% Similarity=0.232 Sum_probs=84.1
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecc----cccCccccCccccccccCCCCcEEE-ecccc
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI----QCGMGRSGSHFWAFQTQGAVPDIIT-VGKPM 162 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~tG~gr~G~~~~a~~~~g~~pDiv~-~sK~l 162 (284)
.+++|+|++.--. .-|.+-. +++|.++++++|+++|+ -+ .+++-+-|. + -.||++ .+|.+
T Consensus 195 ~~~~a~v~vq~Pn-~~G~~ed----~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge-------~--GADI~vg~~Q~f 259 (429)
T PF02347_consen 195 DDDTAAVMVQNPN-TFGVFED----IKEIADIAHAAGALVIV-GADPNALGGLKSPGE-------Y--GADIVVGEHQTF 259 (429)
T ss_dssp STTEEEEEEESS--TTSB--T----HHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGG-------G--T-SEEEECCTTT
T ss_pred ccCeEEEEeecCC-CCceEee----HHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhh-------c--CccEEeeCCCCC
Confidence 3569999988433 3455443 99999999999999987 22 112222222 1 247763 35666
Q ss_pred c-----CCcceeEEEecHHHHHhchh------------------------------------------------------
Q psy11784 163 G-----NGMPIGAVITSRKIAESLNC------------------------------------------------------ 183 (284)
Q Consensus 163 ~-----~G~p~gav~~~~~i~~~~~~------------------------------------------------------ 183 (284)
| ||=-.|++.++++++..+..
T Consensus 260 g~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G 339 (429)
T PF02347_consen 260 GIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLG 339 (429)
T ss_dssp T---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHHHHHHHHHHHHHHhC
Confidence 5 23346777788887776644
Q ss_pred -------hhhHHHHHHHHHHHHHhc-----cC-cee-EEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCC
Q psy11784 184 -------LDDNRPSGKYLVRPLGIN-----LH-IFW-CLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCL 249 (284)
Q Consensus 184 -------l~~~~~~~~~l~~~L~~~-----~G-~~~-~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~ 249 (284)
-++...+..|+.++|.+. .+ .|+ .+..........++.+++...|+.... +..+.+-+++.=+.
T Consensus 340 ~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~~~~f~e~v~~~~~~~~~~~l~~~~~~~gl~~~~--~~~~~~li~~TE~~ 417 (429)
T PF02347_consen 340 PEGLREIAERIHLNAHYLAERLKKIYGLPFDNPFFFEFVVVFSKDKEVEELLKRGIEGGLNLRY--PDDGALLICVTETR 417 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCCTTBECSSSSSBSSEEEEESS-HHHHHHHHTT----EEEGG--G-SSEEEEE--TT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCceeeeeecCCcHHHHHHHHHHHhcCCCccc--cCCCeEEEEccCCC
Confidence 125667788899998885 11 111 111111223444566666677755543 33458889999999
Q ss_pred CHHHHHHHHHHH
Q psy11784 250 TTENVLFIVSTL 261 (284)
Q Consensus 250 t~~~id~~~~~l 261 (284)
|++|||.+++.|
T Consensus 418 t~edid~lv~~f 429 (429)
T PF02347_consen 418 TKEDIDRLVEAF 429 (429)
T ss_dssp -HHHHHHHHH--
T ss_pred CHHHHHHHHhcC
Confidence 999999999875
No 364
>PRK15029 arginine decarboxylase; Provisional
Probab=97.54 E-value=0.005 Score=61.55 Aligned_cols=46 Identities=20% Similarity=0.132 Sum_probs=36.9
Q ss_pred HHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 219 RYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 219 ~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
.+.+.|.++||.+--.. .+.+-+..+...|+++++.+++.|.++-+
T Consensus 558 ~l~~~L~~~gI~~E~~~--~~~vL~l~s~g~t~~~~~~L~~aL~~~~~ 603 (755)
T PRK15029 558 LVTAWLGRHGIVPTRTT--DFQIMFLFSMGVTRGKWGTLVNTLCSFKR 603 (755)
T ss_pred HHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 68888888899997643 45666777889999999999999987744
No 365
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=97.39 E-value=0.032 Score=57.05 Aligned_cols=156 Identities=12% Similarity=0.059 Sum_probs=100.5
Q ss_pred CeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc---cCccccCccccccccCCCCcEEE-eccccc--
Q psy11784 90 NIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC---GMGRSGSHFWAFQTQGAVPDIIT-VGKPMG-- 163 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t---G~gr~G~~~~a~~~~g~~pDiv~-~sK~l~-- 163 (284)
+++++++- .++..|.+.. +++|.++++++|+++|++=-.- ++-+-|+ .-.||++ .+|.+|
T Consensus 194 ~~~~v~~q-~Pn~~G~ied----~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge---------~GaDi~vg~~q~fg~p 259 (939)
T TIGR00461 194 DVFGCLLQ-YPATDGSILD----YKQLIDALHSHKSLVSVAADLMALTLLTPPGH---------YGADIVLGSSQRFGVP 259 (939)
T ss_pred CEEEEEEE-CCCCCeEEec----HHHHHHHHHHcCCEEEEEechHHhCCcCCHHH---------cCCcEEeeCCCccCCC
Confidence 46777653 2344566654 8999999999999999854332 2212222 1256652 235443
Q ss_pred --C-CcceeEEEecHHHHHhchh---------------------------------------------------------
Q psy11784 164 --N-GMPIGAVITSRKIAESLNC--------------------------------------------------------- 183 (284)
Q Consensus 164 --~-G~p~gav~~~~~i~~~~~~--------------------------------------------------------- 183 (284)
+ |--.|++.+++++...+..
T Consensus 260 ~g~GGP~aG~~a~~~~l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~G 339 (939)
T TIGR00461 260 MGYGGPHAAFFAVKDEYNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKG 339 (939)
T ss_pred CCCCCCceeeeeecHhhHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHH
Confidence 2 3226677777777766543
Q ss_pred hh----hHHHHHHHHHHHHHhccCc-------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHH
Q psy11784 184 LD----DNRPSGKYLVRPLGINLHI-------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTE 252 (284)
Q Consensus 184 l~----~~~~~~~~l~~~L~~~~G~-------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~ 252 (284)
++ ++..+..++.++|.+. |+ |--+.+.-....+.++.+.+.++||.++.. .++.++++..-..|++
T Consensus 340 L~~iA~~~~~~a~~l~~~L~~~-G~~~~~~~fF~~~~v~~~~~~~~~i~~~~~~~gi~l~~~--~~~~i~~s~~E~~t~~ 416 (939)
T TIGR00461 340 LKNIARRIHSLTSILANGLEND-PHELINKTWFDTLTVKVGNGISSELLKAAEEFNINLRAV--DTTTVGIALDETTTKA 416 (939)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCcccCCCccceEEEEeCCCCHHHHHHHHHHCCCeeeec--CCCEEEEEeecCCCHH
Confidence 22 4555667788888773 42 112222111124778999999999998863 3478999999999999
Q ss_pred HHHHHHHHHH
Q psy11784 253 NVLFIVSTLN 262 (284)
Q Consensus 253 ~id~~~~~l~ 262 (284)
||+.+++.|.
T Consensus 417 di~~l~~~~~ 426 (939)
T TIGR00461 417 DVENLLKVFD 426 (939)
T ss_pred HHHHHHHHhc
Confidence 9999999995
No 366
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=97.31 E-value=0.071 Score=49.26 Aligned_cols=170 Identities=14% Similarity=0.148 Sum_probs=105.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE--ecccccC-ccccCccccccccCCCC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA--DEIQCGM-GRSGSHFWAFQTQGAVP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~--DEv~tG~-gr~G~~~~a~~~~g~~p 153 (284)
++.|++. + ..++++++++--...|....- +++|.+.++++|+++|+ |=+--++ -.-|+ .-.
T Consensus 200 ~~~l~~~-~--~~~~~gv~vQyP~~~G~~~~d----~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe---------~GA 263 (450)
T COG0403 200 LDDLESA-D--DGDVFGVLVQYPNTFGIVEED----LRALIEAAHSAGALVIVAADPLALGLLKPPGE---------FGA 263 (450)
T ss_pred hhhhhhc-c--ccCeEEEEEecCCCCCccchh----HHHHHHHHhhcCCEEEEEechhHhhccCCccc---------cCC
Confidence 4555554 2 346999999854433323333 89999999999998875 3222122 01122 124
Q ss_pred cEEE-----eccccc-CCcceeEEEecHHHHHhchh--------------------------------------------
Q psy11784 154 DIIT-----VGKPMG-NGMPIGAVITSRKIAESLNC-------------------------------------------- 183 (284)
Q Consensus 154 Div~-----~sK~l~-~G~p~gav~~~~~i~~~~~~-------------------------------------------- 183 (284)
||++ ||=.++ ||--.|++.++++.+..+..
T Consensus 264 DIvvG~~QrfGvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~ 343 (450)
T COG0403 264 DIVVGSAQRFGVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLAL 343 (450)
T ss_pred ceEEecCcccCCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHH
Confidence 5553 444555 34456777788888776654
Q ss_pred -----------------hhhHHHHHHHHHHHHHhc-cCce-------eEEEEecccHHHHHHHHHHHHCCcEEeecCCCC
Q psy11784 184 -----------------LDDNRPSGKYLVRPLGIN-LHIF-------WCLILLSITYYLYRYTRRMKEAKIIVANEGEYG 238 (284)
Q Consensus 184 -----------------l~~~~~~~~~l~~~L~~~-~G~~-------~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~ 238 (284)
-++..++..++.++|++. .|.- .-+.+.-.......+.++....|+-++... .
T Consensus 344 ~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~--~ 421 (450)
T COG0403 344 AASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVD--A 421 (450)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecchhHHHHHHHHHHhcCCceeeec--C
Confidence 126667788888888864 2221 111121111456677778888899888643 3
Q ss_pred CEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 239 NVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 239 ~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
..+-++..=+.|+++|+.+++.|...
T Consensus 422 ~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 422 DTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred CceEEEeecccCHHHHHHHHHHHhhh
Confidence 46667767778999999999888654
No 367
>KOG2040|consensus
Probab=97.26 E-value=0.039 Score=53.42 Aligned_cols=231 Identities=21% Similarity=0.266 Sum_probs=132.3
Q ss_pred HHHHHHHcc-----CCccEEEEcCCCcccchhhhcCCCCcccccCCCCCceEEccCCCCcCCCCCCCchHHHHHHHHHHH
Q psy11784 7 ALQLARAYT-----GRQNIVVVDAAYHGTVNLLLDISPRAFMLSSEKKPWVHVIPFPDTYRGEFSADDPQAAQKYAQAAR 81 (284)
Q Consensus 7 AlklAr~~~-----~r~~il~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 81 (284)
.++..|.|. |.+.|-...-|-||.--.+....+.+ .+|..-...+ +-| +.+|+
T Consensus 614 GL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk------------vvpV~~~~~G--~id--------~~dLk 671 (1001)
T KOG2040|consen 614 GLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK------------VVPVGCDANG--NID--------MVDLK 671 (1001)
T ss_pred hHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE------------EEEeeccCCC--Ccc--------HHHHH
Confidence 456667763 45666667888999765554443322 1221110001 111 67788
Q ss_pred HHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecc----cccCccccCcccccc--ccCCCCcE
Q psy11784 82 NIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI----QCGMGRSGSHFWAFQ--TQGAVPDI 155 (284)
Q Consensus 82 ~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv----~tG~gr~G~~~~a~~--~~g~~pDi 155 (284)
+.-+++.++.||+++-- ++..|+..+ -++.++++-++||--+.+|-+ |-|+.|-|. ++.+ |.++.-
T Consensus 672 ~kaekh~~~Laa~MvTY-PST~GvfE~---~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd--~GaDV~HLNLHK-- 743 (1001)
T KOG2040|consen 672 AKAEKHKDNLAALMVTY-PSTHGVFEE---GIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGD--IGADVCHLNLHK-- 743 (1001)
T ss_pred HHHHHhhhhhheeEEec-ccccccccc---cHHHHHHHHHhcCCEEEecCCCccceecccCCcc--ccccceeecccc--
Confidence 88888888898887752 344454332 378899999999999999975 556655553 2221 111110
Q ss_pred EEecccccCC-cceeEEEecHHHHHhchh-------------------------------------------hh----hH
Q psy11784 156 ITVGKPMGNG-MPIGAVITSRKIAESLNC-------------------------------------------LD----DN 187 (284)
Q Consensus 156 v~~sK~l~~G-~p~gav~~~~~i~~~~~~-------------------------------------------l~----~~ 187 (284)
||.=.-||| -.+|-+.+.+.+...+.. +. -+
T Consensus 744 -TFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~A 822 (1001)
T KOG2040|consen 744 -TFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIA 822 (1001)
T ss_pred -eeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeehhHHHHHHHhcccccchhhHHH
Confidence 111111221 112222223322222211 11 22
Q ss_pred HHHHHHHHHHHHhc--------cCceeEEEEe----c----ccHHHHHHHHHHHHCCcEEeec-CCCCCEEEEEcCCCCC
Q psy11784 188 RPSGKYLVRPLGIN--------LHIFWCLILL----S----ITYYLYRYTRRMKEAKIIVANE-GEYGNVLLFLPAMCLT 250 (284)
Q Consensus 188 ~~~~~~l~~~L~~~--------~G~~~~i~~~----~----~~~~~~~~~~~l~~~Gv~~~~~-~~~~~~lr~~p~l~~t 250 (284)
--++.|+.++|+.- .| .++-+|. + ....+..++++|++.|+....- -|-.+++.+.|.=.-+
T Consensus 823 iLNaNYMakRLe~hYkil~~~~~~-~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFHaPTmswPV~gtLMIEPTESE~ 901 (1001)
T KOG2040|consen 823 ILNANYMAKRLESHYKILFRGENG-LVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFHAPTMSWPVAGTLMIEPTESED 901 (1001)
T ss_pred hhhhHHHHHHHhhccceeEecCCc-ceeeeeeeechhhccccCCcHHHHHHHHHhccCCCCccccccCCceEeccCcccc
Confidence 23456677777654 33 3444443 1 1235778999999999876422 1345789999988889
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy11784 251 TENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 251 ~~~id~~~~~l~~~l~~~~ 269 (284)
++|+|++++++-.+-+++.
T Consensus 902 k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 902 KAELDRFCDALISIREEIA 920 (1001)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999988776654
No 368
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=97.14 E-value=0.013 Score=54.27 Aligned_cols=95 Identities=18% Similarity=0.180 Sum_probs=57.0
Q ss_pred HHHHHHHHHhc-CCC-ee-EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCC-C
Q psy11784 77 AQAARNIMEAH-RDN-IA-TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGA-V 152 (284)
Q Consensus 77 ~~~l~~~i~~~-~~~-va-avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~-~ 152 (284)
.++|++.|++. ..+ +. +|+.----...|.+-+ +++|.++|++|+++|.+|-++.|....-+ .+-....|+ .
T Consensus 178 ~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~----l~~i~~i~~~~~~wlHVDaA~gg~~~~~~-~~~~~~~gi~~ 252 (373)
T PF00282_consen 178 IEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP----LEEIADICEKYNIWLHVDAAYGGSALLSP-EYRHLLFGIER 252 (373)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S----HHHHHHHHHHCT-EEEEEETTGGGGGGHC-TTGGGGTTGGG
T ss_pred HHHhhhhhcccccccccceeeeccCCCcccccccC----HHHHhhhccccceeeeecccccccccccc-ccccccccccc
Confidence 67788877632 222 33 3433333334676666 99999999999999999988877321111 111112333 2
Q ss_pred CcEEEe--cccccCCcceeEEEecHH
Q psy11784 153 PDIITV--GKPMGNGMPIGAVITSRK 176 (284)
Q Consensus 153 pDiv~~--sK~l~~G~p~gav~~~~~ 176 (284)
.|-+++ -|.++..++.|.++.+++
T Consensus 253 adSit~d~HK~l~~P~~~~~~l~r~~ 278 (373)
T PF00282_consen 253 ADSITIDPHKWLGVPYGCGVLLVRDK 278 (373)
T ss_dssp ESEEEEETTTTTS-SSS-EEEEESSG
T ss_pred ccccccchhhhhcCCccceeEEeecc
Confidence 577765 499987789999998763
No 369
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=97.14 E-value=0.009 Score=56.66 Aligned_cols=93 Identities=16% Similarity=0.038 Sum_probs=57.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc-ccCcccccc-ccCC-CC
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR-SGSHFWAFQ-TQGA-VP 153 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr-~G~~~~a~~-~~g~-~p 153 (284)
.+++++.+++....= +|+.--.....|.+-+ +++|.++|++|++++.+|-++.||-- .-.. ... .+++ ..
T Consensus 195 ~~~l~~~i~~~t~~g-~vV~~aGtT~~G~iDd----i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~--~~~~~f~l~~v 267 (460)
T COG0076 195 VDALEEAIDENTIGG-VVVGTAGTTDTGSIDD----IEELADIAEEYGIWLHVDAAFGGFLLPFLEP--DGRWDFGLEGV 267 (460)
T ss_pred HHHHHHHHHhhccCc-eEEEEecCCCCCccCC----HHHHHHHHHHcCCcEEEEccccceeecccCc--cchhhcCCCCc
Confidence 678888888433220 1322222223444444 99999999999999999999887621 0000 001 1334 35
Q ss_pred cEEEec--ccccCCcceeEEEecHH
Q psy11784 154 DIITVG--KPMGNGMPIGAVITSRK 176 (284)
Q Consensus 154 Div~~s--K~l~~G~p~gav~~~~~ 176 (284)
|-++++ |.+..-++.|+++.+++
T Consensus 268 dSIt~d~HK~g~aP~~~G~il~rd~ 292 (460)
T COG0076 268 DSITVDGHKYGLAPIGCGVVLFRDE 292 (460)
T ss_pred eEEEECcccccCCCCCceEEEEECH
Confidence 666654 76655577889998765
No 370
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=97.13 E-value=0.018 Score=53.72 Aligned_cols=88 Identities=14% Similarity=0.191 Sum_probs=54.9
Q ss_pred HHHHHHHHhcCCCee---EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCc
Q psy11784 78 QAARNIMEAHRDNIA---TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 78 ~~l~~~i~~~~~~va---avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
+.+++.+++++..-+ +||+-|-. .|.... +++|.++|+++++.|++||+|.+.-+... +-......-.|
T Consensus 154 ~~i~~~l~~~p~~k~~~~vvlt~PTY--~Gv~~d----i~~I~~~~h~~~~~llvDEAhGah~~F~~--lp~~a~~~gad 225 (417)
T PF01276_consen 154 EDIEEALKEHPDAKAPRLVVLTSPTY--YGVCYD----IKEIAEICHKHGIPLLVDEAHGAHFGFHP--LPRSALALGAD 225 (417)
T ss_dssp HHHHHHHHHCTTCHCESEEEEESS-T--TSEEE-----HHHHHHHHCCTECEEEEE-TT-TTGGCSG--GGTTCSSTTSS
T ss_pred HHHHHHHHhCccccCceEEEEeCCCC--CeEEEC----HHHHHHHhcccCCEEEEEccccccccCCC--CccchhhccCc
Confidence 678888887765544 77888853 466666 99999999999999999999975322112 12223445566
Q ss_pred -------EEEec--ccccCCc-ceeEEEec
Q psy11784 155 -------IITVG--KPMGNGM-PIGAVITS 174 (284)
Q Consensus 155 -------iv~~s--K~l~~G~-p~gav~~~ 174 (284)
+++-| |.+++ + .-+.+-.+
T Consensus 226 ~~~~~~~~vvqS~HKtL~a-ltQts~lh~~ 254 (417)
T PF01276_consen 226 RPNDPGIIVVQSTHKTLPA-LTQTSMLHVK 254 (417)
T ss_dssp -CTSBEEEEEEEHHHHSSS--TT-EEEEEE
T ss_pred cccccceeeeechhhcccc-cccceEEEec
Confidence 77766 88764 3 23444443
No 371
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=96.83 E-value=0.0029 Score=57.50 Aligned_cols=97 Identities=21% Similarity=0.222 Sum_probs=39.9
Q ss_pred HHHHHHHHHhcCCCeeEEE-Ecc----eecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc------CccccCcccc
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEP----VFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG------MGRSGSHFWA 145 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Ep----v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG------~gr~G~~~~a 145 (284)
+++.++.|. +++++++ +-| ++|-.+... ++++.+++++|++++|.|-.-.. +|-.++ .-.
T Consensus 126 ~~Dye~AI~---e~Ta~ll~Vh~Sn~~i~GFt~~~~-----~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~E-p~v 196 (367)
T PF03841_consen 126 LSDYEKAIT---ENTAALLKVHTSNFRIQGFTGEVS-----LEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDE-PTV 196 (367)
T ss_dssp -------------------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT---------
T ss_pred ccccccccc---cccccccccccccccccccccccc-----HHHHHHHHhhcCCcEEEECCCCCCcCcccccCccc-cHH
Confidence 445555554 5566653 543 344444433 89999999999999999953311 111111 111
Q ss_pred ccccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh
Q psy11784 146 FQTQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC 183 (284)
Q Consensus 146 ~~~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~ 183 (284)
.+....-.|+|||| |-|||- -.|.+++++++++.++.
T Consensus 197 ~~~~~~GaDlV~fSGdKlLGGP-QaGiI~Gkk~lI~~lk~ 235 (367)
T PF03841_consen 197 QEYLAAGADLVTFSGDKLLGGP-QAGIIVGKKELIEKLKK 235 (367)
T ss_dssp --CCCCT-SEEEEETTSSSSS--S-EEEEEEHHHHHHHHH
T ss_pred HHHhhcCCCEEEEECCCcCCCC-CeEEEEeCHHHHHHHhh
Confidence 12233458999997 888763 35888899999998865
No 372
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=96.76 E-value=0.12 Score=51.37 Aligned_cols=48 Identities=19% Similarity=0.245 Sum_probs=38.8
Q ss_pred HHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+..+.+.|.++||.+--.. .+.+-+..+...|+++++.+++.|.++-+
T Consensus 511 g~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 511 AALVAKFLDERGIVVEKTG--PYNLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred HHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5678888999999997643 56777777889999999999999987743
No 373
>PRK13578 ornithine decarboxylase; Provisional
Probab=96.75 E-value=0.079 Score=52.79 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=39.0
Q ss_pred HHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
+..+.+.|.++||.+--.. .+.+-+..+...|+++++.+++.|.++-+.
T Consensus 517 g~~l~~~L~e~gI~~E~~d--~~~vL~l~s~g~t~~~~~~Lv~aL~~f~~~ 565 (720)
T PRK13578 517 ATILANYLRENGIVPEKCD--LNSILFLLTPAEDMAKLQQLVAMLARFEKH 565 (720)
T ss_pred HHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 4678888888899997643 466777778899999999999999877443
No 374
>KOG0629|consensus
Probab=96.75 E-value=0.019 Score=52.85 Aligned_cols=177 Identities=15% Similarity=0.146 Sum_probs=108.2
Q ss_pred HHHHHHHHHhcC-CC-eeEEEEcceec--CCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccc----cc
Q psy11784 77 AQAARNIMEAHR-DN-IATLICEPVFV--VHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAF----QT 148 (284)
Q Consensus 77 ~~~l~~~i~~~~-~~-vaavi~Epv~~--~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~----~~ 148 (284)
.++||+.|.... .+ +- +++....| .-|..-+ |..+.++|++|+.++.+|-+..| |- ..+. ..
T Consensus 237 ~~dLe~kile~k~kg~~P-f~vnaTaGTTV~GAFDd----L~~iadiC~k~~lWmHvDAAwGG----gl-LmS~k~R~kl 306 (510)
T KOG0629|consen 237 PDDLEKKILEAKAKGGVP-FFVNATAGTTVLGAFDD----LNGIADICEKHKLWMHVDAAWGG----GL-LMSRKHRHKL 306 (510)
T ss_pred hHHHHHHHHHHHhcCCCC-eEEEecCCceeeeccCc----HHHHHHHHHhcCEEEEeeccccc----cc-ccChhhHhhc
Confidence 577888776322 22 32 22222222 2344444 99999999999999999977654 11 1111 22
Q ss_pred cCCC-CcEEEec--ccccCCcceeEEEecHHH-HHh---------chh--------------------------------
Q psy11784 149 QGAV-PDIITVG--KPMGNGMPIGAVITSRKI-AES---------LNC-------------------------------- 183 (284)
Q Consensus 149 ~g~~-pDiv~~s--K~l~~G~p~gav~~~~~i-~~~---------~~~-------------------------------- 183 (284)
.|+. .|-+++. |-+|..++.++.+.+.+- .+. |.+
T Consensus 307 ~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwka 386 (510)
T KOG0629|consen 307 TGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKA 386 (510)
T ss_pred cCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHh
Confidence 4664 4677775 888888899988887654 111 111
Q ss_pred ---------hhhHHHHHHHHHHHHHhccCceeE---------EEEe--c-------c-cH-------HHHHHHHHHHHCC
Q psy11784 184 ---------LDDNRPSGKYLVRPLGINLHIFWC---------LILL--S-------I-TY-------YLYRYTRRMKEAK 228 (284)
Q Consensus 184 ---------l~~~~~~~~~l~~~L~~~~G~~~~---------i~~~--~-------~-~~-------~~~~~~~~l~~~G 228 (284)
++++-++++||.++|++.-|...- +.+. | . .+ .+-.+-..++++|
T Consensus 387 KG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~G 466 (510)
T KOG0629|consen 387 KGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKG 466 (510)
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhcc
Confidence 457888999999999986332211 1111 1 1 11 2334566788888
Q ss_pred cEEe---ecCCCCCEEE--EEcCCCCCHHHHHHHHHHHHHH
Q psy11784 229 IIVA---NEGEYGNVLL--FLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 229 v~~~---~~~~~~~~lr--~~p~l~~t~~~id~~~~~l~~~ 264 (284)
.... |.+..+|.+| +++| +.+.+|+|.+++.|++.
T Consensus 467 t~Mi~YqPl~~~~nffr~v~sn~-a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 467 TTMIGYQPLGDKPNFFRMVISNP-ALTEADLDFLLDEIERL 506 (510)
T ss_pred ceeeEecccccccchhheecccc-hhhhhhHHHHHHHHHHh
Confidence 6653 3333445444 4555 77999999999988765
No 375
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=96.54 E-value=0.056 Score=53.76 Aligned_cols=48 Identities=21% Similarity=0.286 Sum_probs=38.7
Q ss_pred HHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+..+.+.|.++||.+--.. .+.+-|..+...|+++++.+++.|.++-+
T Consensus 511 g~~v~~~L~e~gI~~E~~d--~~~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 511 ASIVAKYLDEHGIVVEKTG--PYNLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred HHHHHHHHHHcCCEEEecC--CCeEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5567888989999997643 56777778889999999999999987643
No 376
>PLN02452 phosphoserine transaminase
Probab=96.13 E-value=0.23 Score=45.75 Aligned_cols=135 Identities=10% Similarity=0.025 Sum_probs=89.2
Q ss_pred CEEEEecccccCccccCccccccccCCCCcEEEecccccCCcceeEEEecHHHHHhchh---------------------
Q psy11784 125 GVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVGKPMGNGMPIGAVITSRKIAESLNC--------------------- 183 (284)
Q Consensus 125 ~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~sK~l~~G~p~gav~~~~~i~~~~~~--------------------- 183 (284)
+++|+|=+++ +| +. ..-.+.+++ |+..--|.+| --.++.+++++++.+....
T Consensus 171 ~~lvVDa~Ss-~g--~~-pidv~~~~v--~~~saqK~lG-P~Gl~~v~vr~~~l~~~~~~~~~~~~~~~~~~~~s~~~TP 243 (365)
T PLN02452 171 VPLVADMSSN-FL--SK-PVDVSKYGV--IYAGAQKNVG-PSGVTIVIIRKDLIGNARPITPGMLDYKIHAENDSLYNTP 243 (365)
T ss_pred CeEEEECCcc-cc--Cc-ccCHHHcCE--EEEecccccC-CCCeEEEEEcHHHHhhcccCCCchhhHHHHHhcCCccCCh
Confidence 8999998887 32 11 234455565 6666669884 1238899999988765432
Q ss_pred ------------------------hhhHHHHHHHHHHHHHhccCceeE-----------EEEe-cccHHHHHHHHHHHHC
Q psy11784 184 ------------------------LDDNRPSGKYLVRPLGINLHIFWC-----------LILL-SITYYLYRYTRRMKEA 227 (284)
Q Consensus 184 ------------------------l~~~~~~~~~l~~~L~~~~G~~~~-----------i~~~-~~~~~~~~~~~~l~~~ 227 (284)
.++.+++.+++.+.|++..|++.. +.+. +......+|.+.+.++
T Consensus 244 ~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~~~~~~f~~~~~~~ 323 (365)
T PLN02452 244 PCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGSELEAEFVKEAAKA 323 (365)
T ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCchhHHHHHHHHHHC
Confidence 125567777888888764343111 1111 3334678899999999
Q ss_pred CcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 228 KIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 228 Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
|+...++...-+.+|+..==.++.++++.+++.++++-+
T Consensus 324 g~~~~~G~r~~gg~R~s~yna~~~~~v~~L~~~m~~f~~ 362 (365)
T PLN02452 324 GMVQLKGHRSVGGMRASIYNAMPLAGVEKLVAFMKDFQA 362 (365)
T ss_pred CCcccCCccccCceEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 999987643223388876556799999999988877654
No 377
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=95.69 E-value=0.32 Score=45.02 Aligned_cols=51 Identities=6% Similarity=-0.006 Sum_probs=40.4
Q ss_pred HHHHHHHHHHCCcEEeecCC--CCCEEEEEcCCCCCHHHHHHHHHHHHHHHHH
Q psy11784 217 LYRYTRRMKEAKIIVANEGE--YGNVLLFLPAMCLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 217 ~~~~~~~l~~~Gv~~~~~~~--~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 267 (284)
..++.+.|.++|+.+.++.. .++.+|+.-==.++++|++.+++.|+=+...
T Consensus 321 ~~~~~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~~ 373 (374)
T TIGR01365 321 AKELISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFAL 373 (374)
T ss_pred HHHHHHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHhc
Confidence 57899999999998876532 3478999855568999999999999876653
No 378
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=95.67 E-value=0.78 Score=42.25 Aligned_cols=139 Identities=13% Similarity=0.042 Sum_probs=85.5
Q ss_pred HHHHhCCEEEEecccccCccccCccccccccCCCCcEEEec--ccccCCcceeEEEecHHHHHhchh-------------
Q psy11784 119 YIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDIITVG--KPMGNGMPIGAVITSRKIAESLNC------------- 183 (284)
Q Consensus 119 l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv~~s--K~l~~G~p~gav~~~~~i~~~~~~------------- 183 (284)
+.+.+++++|+|=+=+ ++ +. .+-.+.+ |++..| |.+|. -.++.++.+++..+....
T Consensus 163 ~~~~~~~llvvD~sS~-~~--s~-pid~~~~----dvi~agsQKnlgP-~Gltvvivs~~al~~~~~~~p~~ldy~~~~~ 233 (364)
T PRK12462 163 AAGLPDSPLIADMSSD-FM--SR-PFDVEAY----GMVYAHAQKNLGP-AGVTVAIIRRALLERVPDTLPPMLDFRTHVE 233 (364)
T ss_pred ccccCCCeEEEEcCch-hh--CC-CCChHHc----cEEEeeccccCCC-CceEEEEECHHHHhhccccCCchhhHHHHHh
Confidence 3444799999995543 31 11 2233333 777655 99972 236778889988765432
Q ss_pred -------------------h--------------hhHHHHHHHHHHHHHhccCceeE-----------EEEe-cccHHHH
Q psy11784 184 -------------------L--------------DDNRPSGKYLVRPLGINLHIFWC-----------LILL-SITYYLY 218 (284)
Q Consensus 184 -------------------l--------------~~~~~~~~~l~~~L~~~~G~~~~-----------i~~~-~~~~~~~ 218 (284)
+ ++.+++++.+++.+++..|++.. +.+. ++.....
T Consensus 234 ~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~~l~~ 313 (364)
T PRK12462 234 HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQPRLDT 313 (364)
T ss_pred cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCHHHHH
Confidence 1 13345556666666665333322 2222 4456678
Q ss_pred HHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 219 RYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 219 ~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
+|.+.+.++|+.-..+...-+.+|.+.=-.++.++++.+++-++++-+
T Consensus 314 ~f~~~a~~~gl~~lkGhr~vgg~Ras~yna~~~e~v~~L~~fm~~f~~ 361 (364)
T PRK12462 314 LFKEQSTEAGFCGLSGHRSIGGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred HHHHHHHHCCCccccCCcccCceEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 899999999998865432234588876556788888888877766543
No 379
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=95.55 E-value=0.066 Score=48.27 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=33.6
Q ss_pred HHHHHHHHHCCcEEeecCC---CCCEEEEEcCCCCCHHHHHHHHHHHHH
Q psy11784 218 YRYTRRMKEAKIIVANEGE---YGNVLLFLPAMCLTTENVLFIVSTLNR 263 (284)
Q Consensus 218 ~~~~~~l~~~Gv~~~~~~~---~~~~lr~~p~l~~t~~~id~~~~~l~~ 263 (284)
......|++.||+.+.+.. ...++|+ ++..++++.|.++++|..
T Consensus 315 ~DC~~~l~~~~I~tr~G~~fga~~ryVRl--Sml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 315 EDCYAVLREAKIITRSGVLFGADSRYVRL--SMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp SSHHHHHHCTTEEEEEGGGGTS-TTEEEE--ESSS-HHHHHHHHHHHHC
T ss_pred ccHHHHHHhCCcccCCCCccCCCCCeEEE--eccCCHHHHHHHHHHHHh
Confidence 3455667788999987744 3468998 689999999999999964
No 380
>PRK12566 glycine dehydrogenase; Provisional
Probab=95.54 E-value=2.4 Score=43.72 Aligned_cols=155 Identities=16% Similarity=0.126 Sum_probs=98.6
Q ss_pred CCeeEEEEc-ceecCCCcccCChhHHHHHHHHHHHhCCEEEEec--c-cccCccccCccccccccCCCCcEEE-----ec
Q psy11784 89 DNIATLICE-PVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADE--I-QCGMGRSGSHFWAFQTQGAVPDIIT-----VG 159 (284)
Q Consensus 89 ~~vaavi~E-pv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE--v-~tG~gr~G~~~~a~~~~g~~pDiv~-----~s 159 (284)
+++++|++. | +..|.+.. +++|.++++++|+++|+-= . .+.+-.-|. .-.||++ ||
T Consensus 207 ~~~~~v~vq~P--~~~G~i~d----~~~i~~~~h~~gal~~~~~d~laL~ll~~Pge---------~GADI~vG~~Q~fG 271 (954)
T PRK12566 207 HAVFGALLQYP--DTHGEIRD----LRPLIDQLHGQQALACVAADLLSLLVLTPPGE---------LGADVVLGSTQRFG 271 (954)
T ss_pred CCEEEEEEECC--CCceEEcc----HHHHHHHHHHcCCEEEEEeCHHHHhCCCChhh---------cCCcEEeeCCCcCC
Confidence 468999874 4 33455543 8999999999999977321 1 112211122 1256763 33
Q ss_pred ccccCCcc-eeEEEecHHHHHhchh-------------------------------------------------------
Q psy11784 160 KPMGNGMP-IGAVITSRKIAESLNC------------------------------------------------------- 183 (284)
Q Consensus 160 K~l~~G~p-~gav~~~~~i~~~~~~------------------------------------------------------- 183 (284)
=.++.|=| .|++.+++++...+..
T Consensus 272 vp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp 351 (954)
T PRK12566 272 VPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGP 351 (954)
T ss_pred CCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhCh
Confidence 33343324 6777778887776654
Q ss_pred --hh----hHHHHHHHHHHHHHhccCc-------eeEEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCC
Q psy11784 184 --LD----DNRPSGKYLVRPLGINLHI-------FWCLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLT 250 (284)
Q Consensus 184 --l~----~~~~~~~~l~~~L~~~~G~-------~~~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t 250 (284)
+. ++..+..++.+.|.+ .|+ |--+.+. ....+.++.+++.++|+.++.. ..+.+.++.-=++|
T Consensus 352 ~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~fF~~~~v~-~~~~~~~~~~~a~~~~~n~r~~--~~~~~~~s~de~~~ 427 (954)
T PRK12566 352 EGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRHFFDTLTLE-VGGAQAAIIESAEAARINLRIL--GRGRLGVSLDETCD 427 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh-cCCccccCCccceEEEE-ccCCHHHHHHHHHHCCCeeEEe--CCCeEEEEeCCCCC
Confidence 21 355566788888887 442 2222221 1114678889999999999864 35678888788899
Q ss_pred HHHHHHHHHHHH
Q psy11784 251 TENVLFIVSTLN 262 (284)
Q Consensus 251 ~~~id~~~~~l~ 262 (284)
.+|++.+++.|.
T Consensus 428 ~~~~~~~~~~f~ 439 (954)
T PRK12566 428 EATVARLFDIFL 439 (954)
T ss_pred HHHHHHHHHHhc
Confidence 999999999984
No 381
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=94.93 E-value=0.16 Score=46.79 Aligned_cols=98 Identities=14% Similarity=0.179 Sum_probs=61.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCccccccccCCCCcEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQTQGAVPDII 156 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDiv 156 (284)
..+++.+|..+..-.-- +..+-.+..|.+. ++++.++|++||+++|+|..- |. +.-...--....-.-+|+|
T Consensus 146 ~~d~~~AIne~ta~llk-V~s~~~~f~~~l~-----~~~l~~ia~~~~lpvivD~aS-g~-~v~~e~~l~~~la~GaDLV 217 (395)
T COG1921 146 LKDYELAINENTALLLK-VHSSNYGFTGMLS-----EEELVEIAHEKGLPVIVDLAS-GA-LVDKEPDLREALALGADLV 217 (395)
T ss_pred HHHHHHHhccCCeeEEE-Eeecccccccccc-----HHHHHHHHHHcCCCEEEecCC-cc-ccccccchhHHHhcCCCEE
Confidence 56777777622211222 2333335556554 788999999999999999643 22 1111011112233558999
Q ss_pred Eec--ccccCCcceeEEEecHHHHHhchh
Q psy11784 157 TVG--KPMGNGMPIGAVITSRKIAESLNC 183 (284)
Q Consensus 157 ~~s--K~l~~G~p~gav~~~~~i~~~~~~ 183 (284)
+|| |-|+| -.-|.+++++++++.+..
T Consensus 218 ~~SgdKllgG-PqaGii~GkKelI~~lq~ 245 (395)
T COG1921 218 SFSGDKLLGG-PQAGIIVGKKELIEKLQS 245 (395)
T ss_pred EEecchhcCC-CccceEechHHHHHHHHh
Confidence 997 88875 345888899999988765
No 382
>KOG0628|consensus
Probab=94.80 E-value=0.81 Score=42.88 Aligned_cols=63 Identities=14% Similarity=0.055 Sum_probs=43.1
Q ss_pred EEEEecccHHHHHHHHHHHHC-CcEEeecCCCC-CEEEEEcCCC-CCHHHHHHHHHHHHHHHHHHh
Q psy11784 207 CLILLSITYYLYRYTRRMKEA-KIIVANEGEYG-NVLLFLPAMC-LTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 207 ~i~~~~~~~~~~~~~~~l~~~-Gv~~~~~~~~~-~~lr~~p~l~-~t~~~id~~~~~l~~~l~~~~ 269 (284)
.+.+.+++....++.+++-.. .|.+.+....+ -.||+....- .+++|+++.-+.+.+..+.+.
T Consensus 408 cFRlk~~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 408 CFRLKGDNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred EEeecCCcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 344445667777888888765 56666654433 3678876444 367889999999988887753
No 383
>KOG1412|consensus
Probab=93.82 E-value=4.8 Score=36.15 Aligned_cols=154 Identities=15% Similarity=0.185 Sum_probs=97.1
Q ss_pred ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC---cccccccc---CCCCcEE--EecccccC-Cccee-
Q psy11784 100 FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS---HFWAFQTQ---GAVPDII--TVGKPMGN-GMPIG- 169 (284)
Q Consensus 100 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~---~~~a~~~~---g~~pDiv--~~sK~l~~-G~p~g- 169 (284)
....|+ -|+++.+.+|.+.-++.+..-.+|-+|.|| -+|. --|+..++ | .+=++ .|+|-+|- +-++|
T Consensus 188 hNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGf-ASGD~~~DawAiR~fV~~g-~e~fv~QSFaKNfGlYneRvGn 264 (410)
T KOG1412|consen 188 HNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGF-ASGDLDADAWAIRYFVEQG-FELFVCQSFAKNFGLYNERVGN 264 (410)
T ss_pred cCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhccc-ccCCccccHHHHHHHHhcC-CeEEEEhhhhhhcccccccccc
Confidence 444554 679999999999999999999999999999 4563 12555443 2 22234 37788762 22333
Q ss_pred --EEEecHHHHHhchh-----------------------------------------hhhHHHHHHHHHHHHHhc-----
Q psy11784 170 --AVITSRKIAESLNC-----------------------------------------LDDNRPSGKYLVRPLGIN----- 201 (284)
Q Consensus 170 --av~~~~~i~~~~~~-----------------------------------------l~~~~~~~~~l~~~L~~~----- 201 (284)
.++-.+.++..+.. -.++.+++..|++.|..+
T Consensus 265 ltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPGt 344 (410)
T KOG1412|consen 265 LTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPGT 344 (410)
T ss_pred eEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 33334444433322 126777777788887776
Q ss_pred -------cCceeEEEEecccHHHHHHHHHHH-HCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHHh
Q psy11784 202 -------LHIFWCLILLSITYYLYRYTRRMK-EAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFTSLQ 269 (284)
Q Consensus 202 -------~G~~~~i~~~~~~~~~~~~~~~l~-~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~~ 269 (284)
.|++.---+ ...-++.|. ++.|++.+. ++|-++ ..+...++....+++++++.+.
T Consensus 345 WDHI~~QiGMFSyTGL------tp~qV~~li~~h~vyLl~~----GRInis---GLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 345 WDHITQQIGMFSYTGL------TPAQVDHLIENHKVYLLSD----GRINIS---GLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred HHHHHhhccceeecCC------CHHHHHHHHHhceEEEecC----CcEeee---ccccccHHHHHHHHHHHHHhhc
Confidence 444422222 233455566 468888753 345553 4566789999999999887763
No 384
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=92.21 E-value=3.2 Score=40.94 Aligned_cols=57 Identities=16% Similarity=0.124 Sum_probs=38.5
Q ss_pred HHHHHHHHHh---cCCCeeEEEEcceecCCCcccCChhHHHHHHHHH---HHhCC--EEEEecccccCc
Q psy11784 77 AQAARNIMEA---HRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYI---HEIGG--VVIADEIQCGMG 137 (284)
Q Consensus 77 ~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~---~~~g~--llI~DEv~tG~g 137 (284)
++.|++.|++ .+..+.+|+.----.+.|.+-| +++|.++| +++|+ ++.+|=++.|+.
T Consensus 262 ~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDp----l~eI~~l~~~~~~~gl~~~lHVDAAyGG~~ 326 (608)
T TIGR03811 262 INELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDG----IDKIVALRNKLMKEGIYFYLHVDAAYGGYG 326 (608)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCC----HHHHHHHHHHHHHcCCceeEeeeccccchh
Confidence 6777777762 1222555554433334576666 88888888 77897 699999998864
No 385
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=91.75 E-value=11 Score=34.80 Aligned_cols=97 Identities=12% Similarity=0.160 Sum_probs=58.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.++ +++..|.+-=--|-.--...+-+-++++.++.|+. ++++.+|..|.-|-.+ .+...+-.|
T Consensus 144 ~~~i~~~~~---~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~------~EP~~vGAD 214 (403)
T PF06838_consen 144 WEAIKKALK---PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET------QEPTEVGAD 214 (403)
T ss_dssp HHHHHHHHH---TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS------S-GGGGT-S
T ss_pred HHHHHHhhc---cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc------cCccccchh
Confidence 567777776 45666654322222223344556677777777775 7999999887545211 123345678
Q ss_pred EE--EecccccCCc-c-eeEEEecHHHHHhch
Q psy11784 155 II--TVGKPMGNGM-P-IGAVITSRKIAESLN 182 (284)
Q Consensus 155 iv--~~sK~l~~G~-p-~gav~~~~~i~~~~~ 182 (284)
++ .+-|-.|||+ | -|++++++++++...
T Consensus 215 l~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a 246 (403)
T PF06838_consen 215 LMAGSLIKNPGGGIAPTGGYIAGRKDLVERAA 246 (403)
T ss_dssp EEEEETTSGGGTTT-SS-EEEEESHHHHHHHH
T ss_pred heeccceeCCCCCccCcCCEEechHHHHHHHH
Confidence 87 5779999996 5 567888999988654
No 386
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=91.74 E-value=6.1 Score=36.09 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=76.6
Q ss_pred CcEEEec--ccccC-CcceeEEEecHHHHHhchh----------------------------------------------
Q psy11784 153 PDIITVG--KPMGN-GMPIGAVITSRKIAESLNC---------------------------------------------- 183 (284)
Q Consensus 153 pDiv~~s--K~l~~-G~p~gav~~~~~i~~~~~~---------------------------------------------- 183 (284)
-|++.+| |-+|+ | ++.++.++++.+....
T Consensus 191 ~dviyagaQKnlGpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~ 268 (365)
T COG1932 191 YDVIYAGAQKNLGPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEAL 268 (365)
T ss_pred cceEEEehhhccCccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 4677776 88885 6 8889999998876532
Q ss_pred hhhHHHHHHHHHHHHHhc-----------cCcee-EEEEecccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCH
Q psy11784 184 LDDNRPSGKYLVRPLGIN-----------LHIFW-CLILLSITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTT 251 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~-----------~G~~~-~i~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~ 251 (284)
.++.+++.+.|-+.+.+- +..|. .+.+ .+.+....|.+++.++|+..-.+....+-+|...=-+++.
T Consensus 269 ~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~-~~~~ld~~fv~eae~~gl~~lkGhr~vgGmRasiynA~~~ 347 (365)
T COG1932 269 EARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTL-VDAELDKGFVAEAEAAGLIYLKGHRSVGGLRASIYNAVPL 347 (365)
T ss_pred HHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEc-CcHHHHHHHHHHHHHcCCceeccccCCCceeeeeecCCCH
Confidence 125556666666666653 22232 2333 3556778899999999988765533334488877667889
Q ss_pred HHHHHHHHHHHHHHHH
Q psy11784 252 ENVLFIVSTLNRIFTS 267 (284)
Q Consensus 252 ~~id~~~~~l~~~l~~ 267 (284)
++++.+++-++.+.++
T Consensus 348 e~veaL~~fm~~f~~~ 363 (365)
T COG1932 348 EDVEALTDFMDWFEET 363 (365)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999998888877654
No 387
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=91.62 E-value=14 Score=35.93 Aligned_cols=80 Identities=20% Similarity=0.286 Sum_probs=51.3
Q ss_pred HHHHHHHHHhcCCC-eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc-CccccCccccccccCCCCc
Q psy11784 77 AQAARNIMEAHRDN-IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG-MGRSGSHFWAFQTQGAVPD 154 (284)
Q Consensus 77 ~~~l~~~i~~~~~~-vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG-~gr~G~~~~a~~~~g~~pD 154 (284)
.+.+++.+.+++.. -.+||.-|-. .|...- +++|.+++.++++++..||++-- ++..+. +.-....-..|
T Consensus 153 ~~~~~~~l~~~~~~~k~~vitnpTY--dGv~~n----~~~i~~~~~~~~a~v~~deah~~~~~~~~~--l~~~~~~~~~~ 224 (557)
T COG1982 153 LETFKEALLAHPDAEKLAVITNPTY--DGVCYN----LRKIVELLHHYGAWVLYDEAHPAHFDFSPM--LPESALNGGAD 224 (557)
T ss_pred HHHHHHHHHhChhhheeEEEecCcc--ceEeec----HHHHHHHHhhcCceEEhhhcCccccccccc--CcchhhhcCce
Confidence 45566666555555 7788888853 344444 89999999999999999999852 222221 11112223457
Q ss_pred EEEec--ccccC
Q psy11784 155 IITVG--KPMGN 164 (284)
Q Consensus 155 iv~~s--K~l~~ 164 (284)
++|-| |.+++
T Consensus 225 ~~tqS~HK~l~a 236 (557)
T COG1982 225 FVTQSTHKLLAA 236 (557)
T ss_pred EEEechhhhhhh
Confidence 77766 76664
No 388
>KOG2467|consensus
Probab=90.63 E-value=3.8 Score=37.53 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhCCEEEEecccc-cCccccCccccccccCCCCcEEE--ecccccCCcceeEEE-ecHHH-----------
Q psy11784 113 LSLMYDYIHEIGGVVIADEIQC-GMGRSGSHFWAFQTQGAVPDIIT--VGKPMGNGMPIGAVI-TSRKI----------- 177 (284)
Q Consensus 113 l~~l~~l~~~~g~llI~DEv~t-G~gr~G~~~~a~~~~g~~pDiv~--~sK~l~~G~p~gav~-~~~~i----------- 177 (284)
..++|++|++.|+.|++|=+|- |+--.|....-++ ..|||| .-|+|-| |-|+++ .++-+
T Consensus 206 YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe----y~DiVTTTTHKsLRG--PRg~mIFyRkGvk~~~~k~g~~i 279 (477)
T KOG2467|consen 206 YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE----YCDIVTTTTHKSLRG--PRGAMIFYRKGVKSIKPKQGKEI 279 (477)
T ss_pred HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc----ccceeeccccccccC--CcceeEEEeccCCcCCCCCCCcc
Confidence 7899999999999999998874 4321221001112 247775 4588865 333333 23211
Q ss_pred -H---Hhchh---------------------------------hhhHHHHHHHHHHHHHhc---------cCceeEEEEe
Q psy11784 178 -A---ESLNC---------------------------------LDDNRPSGKYLVRPLGIN---------LHIFWCLILL 211 (284)
Q Consensus 178 -~---~~~~~---------------------------------l~~~~~~~~~l~~~L~~~---------~G~~~~i~~~ 211 (284)
+ +.+.. .+++.++.+.|.+.|.+. ...++-+++.
T Consensus 280 ~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgGTDnHlvLvDLr 359 (477)
T KOG2467|consen 280 LYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGGTDNHLVLVDLR 359 (477)
T ss_pred eechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHcCceEecCCccceEEEEecc
Confidence 0 11110 236777888888888775 2234555554
Q ss_pred cc---cHHHHHHHHHH---HHCCcEEeec-CCCCCEEEEEcCCCC----CHHHHHHHHHHHHHHHH
Q psy11784 212 SI---TYYLYRYTRRM---KEAKIIVANE-GEYGNVLLFLPAMCL----TTENVLFIVSTLNRIFT 266 (284)
Q Consensus 212 ~~---~~~~~~~~~~l---~~~Gv~~~~~-~~~~~~lr~~p~l~~----t~~~id~~~~~l~~~l~ 266 (284)
+. ......+++.+ .++.-+..-. .-.++-||+-.|... .++|.++..+-|+++++
T Consensus 360 ~~G~dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 360 PKGVDGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred ccCCchHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 32 23344444433 2322221110 112356788766554 57888888888877764
No 389
>KOG1383|consensus
Probab=89.68 E-value=19 Score=34.13 Aligned_cols=87 Identities=10% Similarity=0.107 Sum_probs=56.1
Q ss_pred hhhHHHHHHHHHHHHHhccCce------eEEEEe-cccHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHH-HH
Q psy11784 184 LDDNRPSGKYLVRPLGINLHIF------WCLILL-SITYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTEN-VL 255 (284)
Q Consensus 184 l~~~~~~~~~l~~~L~~~~G~~------~~i~~~-~~~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~-id 255 (284)
.++..+....|++++++..++. +++... .......++...|.+.|-++..- .++..+-++....+..++ .|
T Consensus 356 ~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i~elsd~l~~~GW~lnal-q~P~a~Hi~vt~~~~~~~~A~ 434 (491)
T KOG1383|consen 356 TQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNIFELSDLLRKKGWILNAL-QFPAAIHICVTRVHAREDVAD 434 (491)
T ss_pred HHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCccchhhhhHHHHhcCcCcccc-CCCCceEEEEEeeeccHHHHH
Confidence 4577788889999999873332 233222 22234567888999999887532 233344444445555555 68
Q ss_pred HHHHHHHHHHHHHhhc
Q psy11784 256 FIVSTLNRIFTSLQMD 271 (284)
Q Consensus 256 ~~~~~l~~~l~~~~~~ 271 (284)
+++.-+++++.++...
T Consensus 435 ~~v~Di~~~~~el~~~ 450 (491)
T KOG1383|consen 435 RFVADIRKVVEELKSL 450 (491)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 8888999999888643
No 390
>KOG1411|consensus
Probab=80.37 E-value=18 Score=33.05 Aligned_cols=46 Identities=22% Similarity=0.214 Sum_probs=36.2
Q ss_pred EEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccC
Q psy11784 94 LICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS 141 (284)
Q Consensus 94 vi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~ 141 (284)
|++-.. ....| +-|+.+.+++|+++-++.+.+-++|=++.|| -+|.
T Consensus 201 ilLhaCaHNPTG-vDPt~eqw~ki~~~~~~k~~~pffDmAYQGf-aSG~ 247 (427)
T KOG1411|consen 201 ILLHACAHNPTG-VDPTKEQWEKISDLIKEKNLLPFFDMAYQGF-ASGD 247 (427)
T ss_pred EEeehhhcCCCC-CCccHHHHHHHHHHhhhccccchhhhhhccc-ccCC
Confidence 444433 33445 4679999999999999999999999999999 4665
No 391
>PF13481 AAA_25: AAA domain; PDB: 1G8Y_J 1OLO_A 1NLF_C.
Probab=74.08 E-value=8.7 Score=31.35 Aligned_cols=52 Identities=12% Similarity=0.150 Sum_probs=29.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCc-ccC-C--hhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGA-VVP-P--PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~-~~~-~--~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++.+... .++..||+||++...+. .-. + ..+++.+.++|+++|+.+|+
T Consensus 129 ~~~l~~~~~~~-~~~~lvviD~l~~~~~~~~~~~~~~~~~~~~l~~la~~~~~~vi~ 184 (193)
T PF13481_consen 129 LEELEAALKEL-YGPDLVVIDPLQSLHDGDENSNSAVAQLMQELKRLAKEYGVAVIL 184 (193)
T ss_dssp HHHHHHHHTT-----SEEEEE-GGGG--S-TT-HHHHHHHHHHHHHHHHHH--EEEE
T ss_pred HHHHHHHHhhc-CCCcEEEEcCHHHHhcCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 45555555531 24778999998765322 111 1 46899999999999987764
No 392
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=65.32 E-value=15 Score=31.13 Aligned_cols=48 Identities=6% Similarity=0.032 Sum_probs=30.7
Q ss_pred HHHHHHHHHhcCCCeeEEE-EcceecCCCcccCChhHHHHHHHHHHHhCCEEEEec
Q psy11784 77 AQAARNIMEAHRDNIATLI-CEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi-~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 131 (284)
++.+|++++ .++.+|- -|--.+. -. -.+..++++++|++|++.||+++
T Consensus 24 ~~~ve~al~---~Gv~~vQlR~K~~~~-~~---~~~~a~~~~~lc~~~~v~liINd 72 (211)
T COG0352 24 LEWVEAALK---GGVTAVQLREKDLSD-EE---YLALAEKLRALCQKYGVPLIIND 72 (211)
T ss_pred HHHHHHHHh---CCCeEEEEecCCCCh-HH---HHHHHHHHHHHHHHhCCeEEecC
Confidence 456777776 5554443 3332111 00 04667899999999999999876
No 393
>PF12310 Elf-1_N: Transcription factor protein N terminal; InterPro: IPR022084 This domain family is found in eukaryotes, and is approximately 110 amino acids in length. The family is found in association with PF00178 from PFAM. There is a conserved PAVIVE sequence motif. Elf-1 is an immune cell specific transcription factor. It is found in T cells, B cells, megakaryocytes,and mast cells and is involved in the control of transcription for various immune proteins. These include IL-2, GM-CSF, IL-5, IL-2 receptor alpha chain, and CD4 in T cells, IgH, blk, and lyn in B cells, TdT in T and B cells, IL-3 in megakaryocytes, and SCL and Fc-epsilon-RI alpha chain in mast cells.
Probab=62.52 E-value=5.6 Score=29.78 Aligned_cols=32 Identities=22% Similarity=0.307 Sum_probs=23.6
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM 136 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~ 136 (284)
...-|||+|||++. +|-..|-. |..||++|++
T Consensus 29 s~~PAVIVE~VP~a---------------~l~~~Ysg-Lv~dde~t~~ 60 (108)
T PF12310_consen 29 SVFPAVIVEQVPSA---------------DLLQGYSG-LVYDDEPTYM 60 (108)
T ss_pred CCCCeEEEeecCch---------------HHhccccc-eEEeecccce
Confidence 34789999999874 24555655 8888888876
No 394
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=61.68 E-value=29 Score=28.41 Aligned_cols=55 Identities=16% Similarity=0.208 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHHh-cCCCeeEEEEcceec----CCC-cccCChhHHHHHHHHHHHhCCEEE
Q psy11784 74 QKYAQAARNIMEA-HRDNIATLICEPVFV----VHG-AVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 74 ~~~~~~l~~~i~~-~~~~vaavi~Epv~~----~~G-~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
+++.+.++++++. ...+...|++.|..- .++ ....-+.|-+.++++|+++|+.++
T Consensus 90 ~~~~~nl~~ii~~~~~~~~~~il~tp~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 150 (198)
T cd01821 90 TTYKEYLRRYIAEARAKGATPILVTPVTRRTFDEGGKVEDTLGDYPAAMRELAAEEGVPLI 150 (198)
T ss_pred HHHHHHHHHHHHHHHHCCCeEEEECCccccccCCCCcccccchhHHHHHHHHHHHhCCCEE
Confidence 3445566666652 123456677777531 111 222346788999999999998874
No 395
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=60.76 E-value=33 Score=30.54 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=39.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
.+++++.+.+ .++..+-+.|.... ..+.+..+..+.+.|.++|+++++ |||.+-
T Consensus 115 ~~E~er~v~~--~gf~g~~l~p~~~~---~~~~~~~~~pi~~~a~~~gvpv~i---htG~~~ 168 (293)
T COG2159 115 AEELERRVRE--LGFVGVKLHPVAQG---FYPDDPRLYPIYEAAEELGVPVVI---HTGAGP 168 (293)
T ss_pred HHHHHHHHHh--cCceEEEecccccC---CCCCChHHHHHHHHHHHcCCCEEE---EeCCCC
Confidence 5667766652 45788888886432 244556689999999999999999 787643
No 396
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=59.65 E-value=1e+02 Score=27.77 Aligned_cols=23 Identities=26% Similarity=0.418 Sum_probs=21.8
Q ss_pred CChhHHHHHHHHHHHhCCEEEEe
Q psy11784 108 PPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 108 ~~~~~l~~l~~l~~~~g~llI~D 130 (284)
.+++|+.+|.++|+++|+-+++|
T Consensus 143 ~~~d~y~~li~~~~~~g~~vilD 165 (310)
T COG1105 143 VPPDAYAELIRILRQQGAKVILD 165 (310)
T ss_pred CCHHHHHHHHHHHHhcCCeEEEE
Confidence 37899999999999999999999
No 397
>smart00642 Aamy Alpha-amylase domain.
Probab=59.07 E-value=44 Score=26.98 Aligned_cols=48 Identities=19% Similarity=0.140 Sum_probs=35.5
Q ss_pred CCeeEEEEcceecCC-------Cc----------ccCChhHHHHHHHHHHHhCCEEEEecccccC
Q psy11784 89 DNIATLICEPVFVVH-------GA----------VVPPPGWLSLMYDYIHEIGGVVIADEIQCGM 136 (284)
Q Consensus 89 ~~vaavi~Epv~~~~-------G~----------~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~ 136 (284)
-++-+|.+-|++-.. |. ..-+.+-++++.+-|+++|+-+|+|=|....
T Consensus 31 lG~~~I~l~Pi~~~~~~~~~~~gY~~~d~~~i~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 31 LGVTAIWLSPIFESPQGYPSYHGYDISDYKQIDPRFGTMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CCCCEEEECcceeCCCCCCCCCCcCccccCCCCcccCCHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 468899999985432 11 1123467999999999999999999887643
No 398
>cd00984 DnaB_C DnaB helicase C terminal domain. The hexameric helicase DnaB unwinds the DNA duplex at the chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis.
Probab=58.76 E-value=28 Score=29.47 Aligned_cols=40 Identities=10% Similarity=0.041 Sum_probs=28.5
Q ss_pred CeeEEEEcceecCC-CcccCC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIATLICEPVFVVH-GAVVPP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~vaavi~Epv~~~~-G~~~~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++..||+|+++..- +..... ..+++.|+++|+++|+.+|+
T Consensus 123 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~L~~la~~~~~~ii~ 168 (242)
T cd00984 123 GLGLIVIDYLQLMSGSKKKGNRQQEVAEISRSLKLLAKELNVPVIA 168 (242)
T ss_pred CCCEEEEcCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 57789999987642 210111 25689999999999988876
No 399
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=58.13 E-value=31 Score=29.12 Aligned_cols=54 Identities=13% Similarity=0.129 Sum_probs=33.9
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCC-cccCC----------hhHHHHHHHHHHHhCCEEEEe
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHG-AVVPP----------PGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G-~~~~~----------~~~l~~l~~l~~~~g~llI~D 130 (284)
.++.+++.+.+. +++..||+|++...-. ..... ..++..|+.+|++|++.+++=
T Consensus 102 ~l~~l~~~l~~~-~~~~liVIDSis~~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avl~t 166 (235)
T cd01123 102 LLEELEAILIES-SRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVIT 166 (235)
T ss_pred HHHHHHHHHhhc-CCeeEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEe
Confidence 345566666532 2688999999965211 01111 256788999999999777653
No 400
>cd07571 ALP_N-acyl_transferase Apolipoprotein N-acyl transferase (class 9 nitrilases). ALP N-acyl transferase (Lnt), is an essential membrane-bound enzyme in gram-negative bacteria, which catalyzes the N-acylation of apolipoproteins, the final step in lipoprotein maturation. This is a reverse amidase (i.e. condensation) reaction. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), this subgroup corresponds to class 9.
Probab=57.86 E-value=38 Score=29.54 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++...+++++...+=+-+|+=|-....|....+..+++++.++|+++++.+|+
T Consensus 25 l~~~~~~i~~a~~~ga~lvvfPE~~l~g~~~~~~~~~~~l~~~ak~~~i~ii~ 77 (270)
T cd07571 25 LDRYLDLTRELADEKPDLVVWPETALPFDLQRDPDALARLARAARAVGAPLLT 77 (270)
T ss_pred HHHHHHHHhhcccCCCCEEEecCCcCCcccccCHHHHHHHHHHHHhcCCeEEE
Confidence 44444445422222234555565555565455678999999999999998874
No 401
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=54.98 E-value=2e+02 Score=27.77 Aligned_cols=167 Identities=15% Similarity=0.118 Sum_probs=96.0
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEec---ccccCccccCccccccccC--CCCcEEEecccccC-
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADE---IQCGMGRSGSHFWAFQTQG--AVPDIITVGKPMGN- 164 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE---v~tG~gr~G~~~~a~~~~g--~~pDiv~~sK~l~~- 164 (284)
.-.+|.||=.--|....-+++|=++|.++-+++=--|=+|+ |.+|+ -.|. |..-+|| +.|.-|++||.|.+
T Consensus 316 PfLL~~DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGl-SMGT--fgAlYYga~l~P~AIiVgKPL~NL 392 (511)
T TIGR03712 316 PFLLIGDPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGL-SMGT--FGALYYGAKLSPHAIIVGKPLVNL 392 (511)
T ss_pred CeEEeeccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeeccc-cccc--hhhhhhcccCCCceEEEcCcccch
Confidence 56788999433245666788888888888877755555666 45787 4675 3444554 68999999999987
Q ss_pred C-cceeEEEecHHHHHh----chh------hhhHHHHHHHHHHHHHhc--cCceeEEE-Eec---ccHHHHHHHHHHHHC
Q psy11784 165 G-MPIGAVITSRKIAES----LNC------LDDNRPSGKYLVRPLGIN--LHIFWCLI-LLS---ITYYLYRYTRRMKEA 227 (284)
Q Consensus 165 G-~p~gav~~~~~i~~~----~~~------l~~~~~~~~~l~~~L~~~--~G~~~~i~-~~~---~~~~~~~~~~~l~~~ 227 (284)
| +.-..-+-++....+ +.. .+.+.+.-+++-+.+++. .-.-+++. +.. +...-..+...+.++
T Consensus 393 GtiA~n~rL~RP~~F~TslDvl~~~~g~~s~~~i~~ln~~fW~~f~~~d~S~T~F~i~YM~~DDYD~~A~~~L~~~l~~~ 472 (511)
T TIGR03712 393 GTIASRMRLDRPDEFGTALDILLLNTGGTSSEDVVKLDNRFWKKFKKSDLSKTTFAIAYMKNDDYDPTAFQDLLPYLSKQ 472 (511)
T ss_pred hhhhccccccCCCCCchHHHhHHhhcCCCCHHHHHHHHHHHHHHHhhcCcccceEEEEeeccccCCHHHHHHHHHHHHhc
Confidence 4 222222222222111 111 345777788888888765 11111111 111 223346677788888
Q ss_pred CcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHH
Q psy11784 228 KIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIFT 266 (284)
Q Consensus 228 Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l~ 266 (284)
|+-+...+..+. +-.-|+.-+.-+++....+|+
T Consensus 473 ~~~v~~kG~~GR------HNDds~~i~~WF~n~y~~IL~ 505 (511)
T TIGR03712 473 GAQVMSKGIPGR------HNDDSPTVNSWFINFYNIILE 505 (511)
T ss_pred CCEEEecCCCCC------CCCCchHHHHHHHHHHHHHHH
Confidence 887764332121 112245556666666665554
No 402
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=52.87 E-value=1.1e+02 Score=27.65 Aligned_cols=147 Identities=18% Similarity=0.137 Sum_probs=80.9
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEEecccccCccccCccccccccCCCCcE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIADEIQCGMGRSGSHFWAFQTQGAVPDI 155 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~DEv~tG~gr~G~~~~a~~~~g~~pDi 155 (284)
+.+...+. +.+..|.+----|-+---..+-.-++++.++.|+- ++++.+|..|.-|-. ..+...+-.|+
T Consensus 156 ~~v~~~i~---~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE------~~EPt~vGaDl 226 (416)
T COG4100 156 QAVKTAIS---DRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVE------EKEPTHVGADL 226 (416)
T ss_pred HHHHHhcC---ccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhh------ccCccccchhh
Confidence 44444443 45555544322222222223345677777777775 789999987754421 11233455677
Q ss_pred E--EecccccCCc--ceeEEEecHHHHHhchh-hh---hHHHHHHHHHHHHHhc-cCceeEEEEecccHHHHHHHHHHHH
Q psy11784 156 I--TVGKPMGNGM--PIGAVITSRKIAESLNC-LD---DNRPSGKYLVRPLGIN-LHIFWCLILLSITYYLYRYTRRMKE 226 (284)
Q Consensus 156 v--~~sK~l~~G~--p~gav~~~~~i~~~~~~-l~---~~~~~~~~l~~~L~~~-~G~~~~i~~~~~~~~~~~~~~~l~~ 226 (284)
+ .+-|-.|||+ .-|++.+++++.+...- +. --++-|.-|-. |+++ .|+|++-.++........|..+.++
T Consensus 227 iAGSLIKNpGGgiaktGGYiaGk~~~ve~~~yRlTaPGIG~e~Gat~~~-l~~myqGlFlAPhvv~qa~Kga~fta~~le 305 (416)
T COG4100 227 IAGSLIKNPGGGIAKTGGYIAGKAELVEAAAYRLTAPGIGREGGATLYS-LREMYQGLFLAPHVVSQAVKGAHFTARFLE 305 (416)
T ss_pred hccceeeCCCCceeeccceeechHHHHHhhceeeecCCccccccccHHH-HHHHHhhhccchHHHHHHhhhhHHHHHHHH
Confidence 6 5679999885 56788889998876432 00 01111222221 2222 6777665555444445566666664
Q ss_pred -CCcEEeec
Q psy11784 227 -AKIIVANE 234 (284)
Q Consensus 227 -~Gv~~~~~ 234 (284)
-|+-+.|.
T Consensus 306 ~lg~~~~P~ 314 (416)
T COG4100 306 KLGFPVNPK 314 (416)
T ss_pred HcCCCCCCc
Confidence 58877764
No 403
>PRK05409 hypothetical protein; Provisional
Probab=51.85 E-value=19 Score=31.92 Aligned_cols=33 Identities=9% Similarity=0.138 Sum_probs=29.4
Q ss_pred ecCCCcccCChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 100 FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 100 ~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
.+-||.-+++++||++|++++++++..++.|.+
T Consensus 65 LslGs~~~ld~~~L~~l~~l~~~~~~~~vSeHL 97 (281)
T PRK05409 65 LSLGGAAPLDKDHLKRLKALADRYQPPLVSEHL 97 (281)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHCCCEEEeee
Confidence 455777789999999999999999999999964
No 404
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=48.23 E-value=22 Score=35.15 Aligned_cols=33 Identities=24% Similarity=0.255 Sum_probs=29.6
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecccccCccccC
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGS 141 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~ 141 (284)
+++-|+++.+-|+++||-+|+|=|+.-|+..|.
T Consensus 212 tPedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 212 TPEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred CHHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 578899999999999999999999998877664
No 405
>cd04915 ACT_AK-Ectoine_2 ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the aspartokinase of the ectoine (1,4,5,6-tetrahydro-2-methyl pyrimidine-4-carboxylate) biosynthetic pathway found in Methylomicrobium alcaliphilum, Vibrio cholerae, and various other halotolerant or halophilic bacteria. Bacteria exposed to hyperosmotic stress accumulate organic solutes called 'compatible solutes' of which ectoine, a heterocyclic amino acid, is one. Apart from its osmotic function, ectoine also exhibits a protective effect on proteins, nucleic acids and membranes against a variety of stress factors. de novo synthesis of ectoine starts with the phosphorylation of L-aspartate and shares its first two enzymatic steps with the biosynthesis of amino acids of the aspartate family: aspartokinas
Probab=48.12 E-value=49 Score=22.05 Aligned_cols=49 Identities=12% Similarity=0.002 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++.+.|.+.|+-+........-+++ ++.+.+++.+++++.|.+.+
T Consensus 16 gv~~ki~~~L~~~~I~v~~i~~~~s~~~i--s~~V~~~~~~~av~~Lh~~f 64 (66)
T cd04915 16 GVLARGLAALAEAGIEPIAAHQSMRNVDV--QFVVDRDDYDNAIKALHAAL 64 (66)
T ss_pred hHHHHHHHHHHHCCCCEEEEEecCCeeEE--EEEEEHHHHHHHHHHHHHHH
Confidence 45678888899999887433222333444 46789999999999997765
No 406
>PF08543 Phos_pyr_kin: Phosphomethylpyrimidine kinase; InterPro: IPR013749 This enzyme 2.7.4.7 from EC is part of the Thiamine pyrophosphate (TPP) synthesis pathway, TPP is an essential cofactor for many enzymes []. ; PDB: 2DDW_B 2DDO_B 2DDM_A 3IBQ_A 3H74_A 3HYO_A 1UB0_A 1VI9_D 1TD2_B 2PHP_D ....
Probab=46.96 E-value=30 Score=29.84 Aligned_cols=28 Identities=11% Similarity=0.198 Sum_probs=17.0
Q ss_pred cCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 107 VPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 107 ~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
..+.+..+.+.++.+++++.+|+|=|+.
T Consensus 69 l~~~~~v~~i~~~l~~~~~~vV~DPVm~ 96 (246)
T PF08543_consen 69 LGSAEQVEIIADFLKKPKIPVVLDPVMG 96 (246)
T ss_dssp -SSHHHHHHHHHHHHHTTTEEEEE---E
T ss_pred cCCchhhhhHHHHHhccCCCEEEecccc
Confidence 4466667777777777777777777764
No 407
>COG0648 Nfo Endonuclease IV [DNA replication, recombination, and repair]
Probab=46.83 E-value=62 Score=28.70 Aligned_cols=62 Identities=18% Similarity=0.145 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC-CEEEEecccc
Q psy11784 70 PQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG-GVVIADEIQC 134 (284)
Q Consensus 70 ~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g-~llI~DEv~t 134 (284)
++...+..+.|.+++.. .. .-+++|-+.|.|....-.-+-|+++.+++++.+ +-+++|=.|+
T Consensus 117 e~~l~~i~~~Ln~~~~~--~~-v~i~~e~~agegs~~g~~F~~L~eii~~~~~~~~igvCiDtcH~ 179 (280)
T COG0648 117 EEGLNRIAEALNELLEE--EG-VIILLENTAGEGSGKGTQFGELAEIIDLIEEKERIGVCIDTCHA 179 (280)
T ss_pred HHHHHHHHHHHHHHhhc--cC-CeEEEEEeccccCccccchhhHHHHHHhhcccCceEEEEEchhh
Confidence 34444555666666653 22 456677777777666777788999999999887 8888996665
No 408
>PF02082 Rrf2: Transcriptional regulator; InterPro: IPR000944 The following uncharacterised bacterial proteins have been shown to be evolutionary related, Desulfovibrio vulgaris protein Rrf2; Escherichia coli hypothetical proteins yfhP and yjeB; Bacillus subtilis hypothetical proteins yhdE, yrzC and ywgB; Mycobacterium tuberculosis hypothetical protein Rv1287; and Synechocystis sp. (strain PCC 6803) hypothetical protein slr0846. These are small proteins of 12 to 18kDa which seem to contain a signal sequence, and may represent a family of probable transcriptional regulators.; PDB: 3T8T_A 3T8R_A 3K69_A 3LWF_C 1XD7_A 2Y75_E 1YLF_C.
Probab=46.22 E-value=52 Score=23.00 Aligned_cols=43 Identities=23% Similarity=0.328 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFI 257 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~ 257 (284)
....++.+.|.+.|++....|+++++.--.||-.+|--||=++
T Consensus 40 ~~l~kil~~L~~~Gli~s~~G~~GGy~L~~~~~~Itl~dI~~a 82 (83)
T PF02082_consen 40 SYLRKILQKLKKAGLIESSRGRGGGYRLARPPEEITLLDIVRA 82 (83)
T ss_dssp HHHHHHHHHHHHTTSEEEETSTTSEEEESS-CCGSBHHHHHHH
T ss_pred HHHHHHHHHHhhCCeeEecCCCCCceeecCCHHHCCHHHHHHh
Confidence 4567889999999998887777677665667777776665443
No 409
>COG0062 Uncharacterized conserved protein [Function unknown]
Probab=45.99 E-value=67 Score=27.06 Aligned_cols=65 Identities=18% Similarity=0.272 Sum_probs=44.6
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-ccccCccccccccCCCCcE-EEecc
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-GRSGSHFWAFQTQGAVPDI-ITVGK 160 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDi-v~~sK 160 (284)
-+-+|||.++|.|.-.+ .++-.+.+.+...+.+.+++.=++=||+ ..||. - ...-+.+|+ +||.+
T Consensus 119 ~~dvIVDalfG~G~~g~-lrep~a~~Ie~iN~~~~pivAVDiPSGl~~dtG~-~---~~~av~Ad~TVTf~~ 185 (203)
T COG0062 119 SADVIVDALFGTGLSGP-LREPFASLIEAINASGKPIVAVDIPSGLDADTGE-V---LGAAVKADLTVTFGA 185 (203)
T ss_pred cCCEEEEeceecCCCCC-CccHHHHHHHHHHhcCCceEEEeCCCCcCCCCCc-c---cCcceeccEEEEecC
Confidence 45799999999865544 4444556666666999999999999998 34564 1 122366775 46654
No 410
>PF03796 DnaB_C: DnaB-like helicase C terminal domain; InterPro: IPR007694 The hexameric helicase DnaB unwinds the DNA duplex at the Escherichia coli chromosome replication fork. Although the mechanism by which DnaB both couples ATP hydrolysis to translocation along DNA and denatures the duplex is unknown, a change in the quaternary structure of the protein involving dimerization of the N-terminal domain has been observed and may occur during the enzymatic cycle. This C-terminal domain contains an ATP-binding site and is therefore probably the site of ATP hydrolysis. ; GO: 0003678 DNA helicase activity, 0005524 ATP binding, 0006260 DNA replication; PDB: 1Q57_E 1E0K_D 1E0J_B 1CR2_A 1CR4_A 1CR1_A 1CR0_A 1MI8_A 2R6D_B 2R6C_C ....
Probab=45.77 E-value=49 Score=28.57 Aligned_cols=53 Identities=8% Similarity=0.044 Sum_probs=34.5
Q ss_pred HHHHHHHHH---hcCCCeeEEEEcceecCCCcccC--Ch----hHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIME---AHRDNIATLICEPVFVVHGAVVP--PP----GWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~---~~~~~vaavi~Epv~~~~G~~~~--~~----~~l~~l~~l~~~~g~llI~ 129 (284)
++++++.++ ....++..|+||.+|-....... .. ...++|+++|+++|+++|+
T Consensus 114 ~~~i~~~i~~~~~~~~~~~~v~IDyl~ll~~~~~~~~~~~~~~~i~~~Lk~lA~~~~i~vi~ 175 (259)
T PF03796_consen 114 IDDIESKIRRLKREGKKVDVVFIDYLQLLKSEDSSDNRRQEIGEISRELKALAKELNIPVIA 175 (259)
T ss_dssp HHHHHHHHHHHHHHSTTEEEEEEEEGGGSBTSCSSSCCHHHHHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHHHHHhhccCCCEEEechHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 455555544 22256889999998764332111 11 3466899999999999997
No 411
>PF04909 Amidohydro_2: Amidohydrolase; InterPro: IPR006992 These proteins are related to the metal-dependent hydrolase superfamily []. The family includes 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase which converts alpha-amino-beta-carboxymuconate-epsilon- semialdehyde (ACMS) to alpha-aminomuconate semialdehyde (AMS). ACMS can be converted non-enzymatically to quinolate, a potent endogenous excitoxin of neuronal cells which is implicated in the pathogenesis of various neurodegenerative disorders. In the presence of AMCSD, ACMS is converted to AMS, a benign catabolite. 2-amino-3-(3-oxoprop-2-enyl)-but-2-enedioate = 2-aminomuconate semialdehyde + CO2. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2QPX_A 4D8L_A 3K4W_I 3IRS_B 4DZI_B 3S4T_G 2GWG_B 3IJ6_A 2DVX_C 2DVT_C ....
Probab=45.68 E-value=71 Score=27.13 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=34.0
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
.+++++.+. ..++.+|-+-|-.+ +....++.+...+-++|.++|+.+++-
T Consensus 87 ~~~l~~~~~--~~g~~Gv~l~~~~~--~~~~~~~~~~~~~~~~~~~~~~pv~~H 136 (273)
T PF04909_consen 87 VEELERALQ--ELGFRGVKLHPDLG--GFDPDDPRLDDPIFEAAEELGLPVLIH 136 (273)
T ss_dssp HHHHHHHHH--TTTESEEEEESSET--TCCTTSGHCHHHHHHHHHHHT-EEEEE
T ss_pred HHHHHHhcc--ccceeeeEecCCCC--ccccccHHHHHHHHHHHHhhccceeee
Confidence 566666664 45688888777433 334445555569999999999998865
No 412
>KOG3843|consensus
Probab=45.63 E-value=50 Score=29.14 Aligned_cols=54 Identities=13% Similarity=0.044 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhcCCC-eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccc
Q psy11784 76 YAQAARNIMEAHRDN-IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQ 133 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~-vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~ 133 (284)
.++.+++.+++.+++ +-+|..-.- -.-+-+++-+++|..+|..|+++-|+..+|
T Consensus 142 dleav~~~iee~g~dcilci~stts----cfapr~pd~leaiaaica~~diphivnnay 196 (432)
T KOG3843|consen 142 DLEAVEAIIEELGEDCILCIHSTTS----CFAPRSPDNLEAIAAICAAHDIPHIVNNAY 196 (432)
T ss_pred hHHHHHHHHHHhCCceEEEEeeccc----ccCCCCCchHHHHHHHHHccCchhhhcccc
Confidence 367888888877766 544433221 123557888999999999999999999876
No 413
>TIGR03849 arch_ComA phosphosulfolactate synthase. This model finds the ComA (Coenzyme M biosynthesis A) protein, phosphosulfolactate synthase, in methanogenic archaea. The ComABC pathway is one of at least two pathways to the intermediate sulfopyruvate. Coenzyme M occurs rarely and sporadically outside of the archaea, as for expoxide metabolism in Xanthobacter autotrophicus Py2, but candidate phosphosulfolactate synthases from that and other species occur fall below the cutoff and outside the scope of this model. This model deliberately is narrower in scope than pfam02679.
Probab=44.69 E-value=33 Score=29.60 Aligned_cols=47 Identities=9% Similarity=0.016 Sum_probs=32.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
...++++++ +++=.++-+ .|-|-....|++++++..++|++||+.+.
T Consensus 11 ~~~~~d~Le-----~~g~yID~lKfg~Gt~~l~~~~~l~eki~la~~~~V~v~ 58 (237)
T TIGR03849 11 PKFVEDYLK-----VCGDYITFVKFGWGTSALIDRDIVKEKIEMYKDYGIKVY 58 (237)
T ss_pred HHHHHHHHH-----HhhhheeeEEecCceEeeccHHHHHHHHHHHHHcCCeEe
Confidence 456777776 334445555 44444556778999999999999999654
No 414
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=44.02 E-value=82 Score=26.26 Aligned_cols=41 Identities=7% Similarity=0.099 Sum_probs=27.5
Q ss_pred CCeeEEEEcceecCCCcc-cC----------ChhHHHHHHHHHHHhCCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAV-VP----------PPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~-~~----------~~~~l~~l~~l~~~~g~llI~ 129 (284)
.++..||+|++..--... .. -..++..|..+|+++++.+|+
T Consensus 113 ~~~~lvVIDsis~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~ 164 (226)
T cd01393 113 GRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred CCeeEEEEcCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEE
Confidence 458899999986531110 10 124567799999999988775
No 415
>TIGR02236 recomb_radA DNA repair and recombination protein RadA. This family consists exclusively of archaeal RadA protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239), and archaeal RadB (TIGR02237). This protein is involved in DNA repair and recombination. The member from Pyrococcus horikoshii contains an intein.
Probab=41.66 E-value=1e+02 Score=27.43 Aligned_cols=58 Identities=10% Similarity=0.153 Sum_probs=35.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCC-----------hhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPP-----------PGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~-----------~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
++.+.+.+.....++..||+|++...--..... ..++..|..++++||+.+++ -+|.+
T Consensus 179 ld~l~~~i~~~~~~~~lVVIDSisa~~r~e~~~~~~~~~r~~~l~~~~~~L~~~a~~~~~~v~~tnqv~~ 248 (310)
T TIGR02236 179 VEKAEDLIKELNNPVKLLIVDSLTSHFRAEYVGRGALAERQQKLNKHLHDLLRLADLYNAAVVVTNQVMA 248 (310)
T ss_pred HHHHHHHHHhcCCCceEEEEecchHhhhHhhcCchhHHHHHHHHHHHHHHHHHHHHHhCcEEEEeceeee
Confidence 556666666444357889999886531110000 13456788999999977654 44544
No 416
>PF13167 GTP-bdg_N: GTP-binding GTPase N-terminal
Probab=41.34 E-value=1.4e+02 Score=21.83 Aligned_cols=59 Identities=10% Similarity=0.089 Sum_probs=35.2
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCC-EEEEecccc
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGG-VVIADEIQC 134 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~t 134 (284)
.+++++.+.+..+-.+..-++=...........-++-+++|.++++++++ ++|+|+-.|
T Consensus 9 ~l~El~~L~~t~g~~vv~~~~q~~~~~~p~~~iG~GK~eei~~~~~~~~~d~vvfd~~Ls 68 (95)
T PF13167_consen 9 SLEELEELAETAGYEVVGTVVQKRRKPDPKTYIGSGKVEEIKELIEELDADLVVFDNELS 68 (95)
T ss_pred HHHHHHHHHHHCCCeEEEEEEecCCCCCcceeechhHHHHHHHHHhhcCCCEEEECCCCC
Confidence 36777777775444444433332222233345567889999999998875 445565333
No 417
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=41.32 E-value=65 Score=24.46 Aligned_cols=34 Identities=15% Similarity=0.088 Sum_probs=24.8
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.+++|+++....... .. =+++.++|++++++||.
T Consensus 71 ~~~agL~i~~~~~~~--~i-----P~~~i~~A~~~~lPli~ 104 (123)
T PF07905_consen 71 KGAAGLGIKTGRYLD--EI-----PEEIIELADELGLPLIE 104 (123)
T ss_pred CCCeEEEEeccCccc--cC-----CHHHHHHHHHcCCCEEE
Confidence 569999887643321 12 27889999999999985
No 418
>cd07576 R-amidase_like Pseudomonas sp. MCI3434 R-amidase and related proteins (putative class 13 nitrilases). Pseudomonas sp. MCI3434 R-amidase hydrolyzes (R,S)-piperazine-2-tert-butylcarboxamide to form (R)-piperazine-2-carboxylic acid. It does so with strict R-stereoselectively. Its preferred substrates are carboxamide compounds which have the amino or imino group connected to their beta- or gamma-carbon. This subgroup belongs to a larger nitrilase superfamily comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13), class 13 represents proteins that at the time were difficult to place in a distinct similarity group. It has been suggested that this subgroup represents a new class. Members of the nitrilase superfamily generally form homomeric compl
Probab=40.96 E-value=74 Score=27.06 Aligned_cols=22 Identities=9% Similarity=0.034 Sum_probs=18.7
Q ss_pred ChhHHHHHHHHHHHhCCEEEEe
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~D 130 (284)
+.++++.++++++++++.+|+=
T Consensus 60 ~~~~~~~l~~~a~~~~~~ii~G 81 (254)
T cd07576 60 DGPALQALRAIARRHGIAIVVG 81 (254)
T ss_pred CChHHHHHHHHHHHcCCEEEEe
Confidence 4568999999999999988863
No 419
>PF03853 YjeF_N: YjeF-related protein N-terminus; InterPro: IPR004443 The YjeF N-terminal domains occur either as single proteins or fusions with other domains and are commonly associated with enzymes. In bacteria and archaea, YjeF N-terminal domains are often fused to a YjeF C-terminal domain with high structural homology to the members of a ribokinase-like superfamily (see PDOC00806 from PROSITEDOC)and/or belong to operons that encode enzymes of diverse functions: pyridoxal phosphate biosynthetic protein PdxJ; phosphopanteine-protein transferase; ATP/GTP hydrolase; and pyruvate-formate lyase 1-activating enzyme. In plants, the YjeF N-terminal domain is fused to a C-terminal putative pyridoxamine 5'-phosphate oxidase. In eukaryotes, proteins that consist of (Sm)-FDF-YjeF N-terminal domains may be involved in RNA processing [, ]. The YjeF N-terminal domains represent a novel version of the Rossmann fold, one of the most common protein folds in nature observed in numerous enzyme families, that has acquired a set of catalytic residues and structural features that distinguish them from the conventional dehydrogenases. The YjeF N-terminal domain is comprised of a three-layer alpha-beta-alpha sandwich with a central beta-sheet surrounded by helices. The conservation of the acidic residues in the predicted active site of the YjeF N-terminal domains is reminiscent of the presence of such residues in the active sites of diverse hydrolases [, ].; PDB: 3K5W_A 2O8N_A 2DG2_F 3RNO_A 1JZT_B 3D3K_A 3D3J_A 3RSG_A 3RT9_A 3RRF_A ....
Probab=40.37 E-value=42 Score=27.12 Aligned_cols=63 Identities=27% Similarity=0.394 Sum_probs=42.7
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-ccccCccccccccCCCCcE-EEec
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-GRSGSHFWAFQTQGAVPDI-ITVG 159 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDi-v~~s 159 (284)
.-+|||.++|.| ...+.++.++++.+.+.+++.++|.=++-||+ .-+|. . ...-+.+|. +||+
T Consensus 100 ~dlIIDal~G~G-~~~~l~~~~~~~i~~iN~~~~~viAiDiPSGl~~dtG~-~---~~~~v~Ad~Tvt~g 164 (169)
T PF03853_consen 100 ADLIIDALFGTG-FSGPLRGPIAELIDWINASRAPVIAIDIPSGLDADTGE-V---DGPAVRADYTVTFG 164 (169)
T ss_dssp ESEEEEES-STT-GGSCGSTCHHHHHHHHHHHCSEEEEESS-TTCBTTTB--B---SSSS---SEEEEES
T ss_pred ccEEEEecccCC-CCCCcCHHHHHHHHHHhccCCcEEEecCCCCccCCCCC-c---CCCEEEcceeeecC
Confidence 779999999984 44556667899999999999999999999998 34454 1 122367775 4554
No 420
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=39.32 E-value=21 Score=32.00 Aligned_cols=26 Identities=23% Similarity=0.373 Sum_probs=21.5
Q ss_pred ChhHHHHHHHHHH-HhCCEEEEecccc
Q psy11784 109 PPGWLSLMYDYIH-EIGGVVIADEIQC 134 (284)
Q Consensus 109 ~~~~l~~l~~l~~-~~g~llI~DEv~t 134 (284)
....|++|.++|. .++.++|+||.|.
T Consensus 157 ~~sRl~ql~~W~g~dfdgvivfDEcH~ 183 (303)
T PF13872_consen 157 YRSRLDQLVDWCGEDFDGVIVFDECHK 183 (303)
T ss_pred ccchHHHHHHHHhcCCCceEEeccchh
Confidence 3466899999995 4688999999996
No 421
>COG0616 SppA Periplasmic serine proteases (ClpP class) [Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=38.93 E-value=2.9e+02 Score=24.84 Aligned_cols=45 Identities=11% Similarity=0.035 Sum_probs=34.1
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
+.+.+|++- +.+.||.+..+..-.++|+++.++.-+.++++.+.+
T Consensus 96 ~~vk~vvL~-inSPGG~v~as~~i~~~l~~l~~~~PV~v~v~~~AA 140 (317)
T COG0616 96 PSVKAVVLR-INSPGGSVVASELIARALKRLRAKKPVVVSVGGYAA 140 (317)
T ss_pred CCCceEEEE-EECcCCchhHHHHHHHHHHHHhhcCCEEEEECCeec
Confidence 346666554 456688888888999999999998877777776554
No 422
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B.
Probab=38.90 E-value=32 Score=25.74 Aligned_cols=27 Identities=19% Similarity=0.209 Sum_probs=22.4
Q ss_pred CChhHHHHHHHHHHHhCC-EEEEecccc
Q psy11784 108 PPPGWLSLMYDYIHEIGG-VVIADEIQC 134 (284)
Q Consensus 108 ~~~~~l~~l~~l~~~~g~-llI~DEv~t 134 (284)
...+.++.+.+..++++. +||+||++-
T Consensus 71 ~~~~l~~~~~~~l~~~~~~~lviDe~~~ 98 (131)
T PF13401_consen 71 TSDELRSLLIDALDRRRVVLLVIDEADH 98 (131)
T ss_dssp -HHHHHHHHHHHHHHCTEEEEEEETTHH
T ss_pred CHHHHHHHHHHHHHhcCCeEEEEeChHh
Confidence 355667889999999987 999999996
No 423
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=38.37 E-value=49 Score=30.62 Aligned_cols=52 Identities=12% Similarity=0.057 Sum_probs=33.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC--------CcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH--------GAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
++.+.+.++. .++..||+|++|... |...--.+++..|.++++++|+.+++=
T Consensus 147 le~I~~~i~~--~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~lak~~~itvilv 206 (372)
T cd01121 147 LEDILASIEE--LKPDLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFIV 206 (372)
T ss_pred HHHHHHHHHh--cCCcEEEEcchHHhhccccccCCCCHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 4555555543 246679999997642 111112356778999999999877653
No 424
>PRK04301 radA DNA repair and recombination protein RadA; Validated
Probab=37.94 E-value=1.1e+02 Score=27.32 Aligned_cols=57 Identities=14% Similarity=0.253 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC-----Cc--ccC----ChhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH-----GA--VVP----PPGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~-----G~--~~~----~~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
++.+++.+.. ..++..||+|++...- +. ..- -..++..|..+|++||+.+|+ -++.+
T Consensus 186 ~~~l~~~i~~-~~~~~lvVIDSisa~~~~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~vavl~tnqv~~ 254 (317)
T PRK04301 186 AEKAEELIKE-GENIKLVIVDSLTAHFRAEYVGRGNLAERQQKLNKHLHDLLRLADLYNAAVVVTNQVMA 254 (317)
T ss_pred HHHHHHHHhc-cCceeEEEEECchHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHHhCCEEEEeceEEe
Confidence 4555555542 2458899999986631 11 000 013577899999999987765 34444
No 425
>cd01125 repA Hexameric Replicative Helicase RepA. RepA is encoded by a plasmid, which is found in most Gram negative bacteria. RepA is a 5'-3' DNA helicase which can utilize ATP, GTP and CTP to a lesser extent.
Probab=37.78 E-value=87 Score=26.63 Aligned_cols=42 Identities=12% Similarity=0.240 Sum_probs=27.6
Q ss_pred CCeeEEEEcceecCCCc----ccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 89 DNIATLICEPVFVVHGA----VVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~----~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
.++..||+||+.+-.+. ...-..+++.|.++++++|+.+++=
T Consensus 110 ~~~~lvviDpl~~~~~~~~~d~~~~~~~~~~L~~~a~~~g~avl~v 155 (239)
T cd01125 110 RRIDLVVIDPLVSFHGVSENDNGAMDAVIKALRRIAAQTGAAILLV 155 (239)
T ss_pred cCCCEEEECChHHhCCCCcCCHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 35778999998653221 1112357888999999988665553
No 426
>PRK11633 cell division protein DedD; Provisional
Probab=37.02 E-value=2.6e+02 Score=24.00 Aligned_cols=62 Identities=6% Similarity=-0.018 Sum_probs=42.7
Q ss_pred CceeEEEEe--cccHHHHHHHHHHHHCCcEEeec---CCCCCEEEEEcCCCCCHHHHHHHHHHHHHH
Q psy11784 203 HIFWCLILL--SITYYLYRYTRRMKEAKIIVANE---GEYGNVLLFLPAMCLTTENVLFIVSTLNRI 264 (284)
Q Consensus 203 G~~~~i~~~--~~~~~~~~~~~~l~~~Gv~~~~~---~~~~~~lr~~p~l~~t~~~id~~~~~l~~~ 264 (284)
+--|.+.+. .+...+..+...|...|+-.... ...+...|++.--..++++++.++..|++.
T Consensus 147 ~~~~vVQlgaf~n~~~A~~l~~kL~~~G~~Ay~~~~~~~~G~~tRV~VGP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 147 GKAYVVQLGALKNADKVNEIVAKLRLSGYRVYTVPSTPVQGKITRIYVGPDASKDKLKGSLGELKQL 213 (226)
T ss_pred CCcEEEEecccCCHHHHHHHHHHHHHCCCeeEEEeeecCCCcEEEEEeCCCCCHHHHHHHHHHHHHh
Confidence 334455554 34567888999999999866542 123445566666677999999999998764
No 427
>TIGR00665 DnaB replicative DNA helicase. This model describes the helicase DnaB, a homohexameric protein required for DNA replication. The homohexamer can form a ring around a single strand of DNA near a replication fork. An intein of 400 residues is found at a conserved location in DnaB of Synechocystis PCC6803, Rhodothermus marinus (both experimentally confirmed), and Mycobacterium tuberculosis. The intein removes itself by a self-splicing reaction. The seed alignment contains inteins so that the model built from the seed alignment will model a low cost at common intein insertion sites.
Probab=36.62 E-value=86 Score=29.42 Aligned_cols=40 Identities=13% Similarity=0.137 Sum_probs=27.6
Q ss_pred CeeEEEEcceecCCCcccC-C-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 90 NIATLICEPVFVVHGAVVP-P-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~-~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
++..||+|+++-..+.... . ....+.|+.+|+++++++|+
T Consensus 305 ~~~~vvID~l~~i~~~~~~~~r~~~i~~i~~~Lk~lA~e~~i~vi~ 350 (434)
T TIGR00665 305 GLGLIVIDYLQLMSGSGRSENRQQEVSEISRSLKALAKELNVPVIA 350 (434)
T ss_pred CCCEEEEcchHhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 4778999998765322111 1 23357899999999998886
No 428
>cd04918 ACT_AK1-AT_2 ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1). This CD includes the second of two ACT domains located C-terminal to the catalytic domain of a monofunctional, lysine-sensitive, plant aspartate kinase 1 (AK1), which can be synergistically inhibited by S-adenosylmethionine (SAM). This isoenzyme is found in higher plants, Arabidopsis thaliana (AT) and Zea mays, and also in Chlorophyta. In its inactive state, Arabidopsis AK1 binds the effectors lysine and SAM (two molecules each) at the interface of two ACT1 domain subunits. The second ACT domain (ACT2), this CD, does not interact with an effector. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=36.12 E-value=84 Score=20.66 Aligned_cols=49 Identities=12% Similarity=0.066 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++.+.|.+.|+-+.....+..-..+ ++.+.+++.+.+++.|.+.+
T Consensus 15 ~~~~~i~~aL~~~~I~v~~i~~g~s~~si--s~~v~~~~~~~av~~Lh~~f 63 (65)
T cd04918 15 LILERAFHVLYTKGVNVQMISQGASKVNI--SLIVNDSEAEGCVQALHKSF 63 (65)
T ss_pred cHHHHHHHHHHHCCCCEEEEEecCccceE--EEEEeHHHHHHHHHHHHHHH
Confidence 34668888898998877432222222233 45778899999999987765
No 429
>cd04922 ACT_AKi-HSDH-ThrA_2 ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). This CD includes the second of two ACT domains of the bifunctional enzyme aspartokinase (AK) - homoserine dehydrogenase (HSDH). The ACT domains are positioned between the N-terminal catalytic domain of AK and the C-terminal HSDH domain found in bacteria (Escherichia coli (EC) ThrA) and higher plants (Zea mays AK-HSDH). AK and HSDH are the first and third enzymes in the biosynthetic pathway of the aspartate family of amino acids. AK catalyzes the phosphorylation of Asp to P-aspartyl phosphate. HSDH catalyzes the NADPH-dependent conversion of Asp 3-semialdehyde to homoserine. HSDH is the first committed reaction in the branch of the pathway that leads to Thr and Met. In E. coli, ThrA is subject to allosteric regulation by the end product L-threonine and the native enzyme is reported to be tetrameric. As with bacteria, plant AK and HSDH are feedback inhibited by pathwa
Probab=36.00 E-value=70 Score=20.59 Aligned_cols=50 Identities=4% Similarity=0.045 Sum_probs=32.2
Q ss_pred cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 214 TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 214 ~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.....++.+.|.+.|+-+..........++ ++.+.+++.++++++|.+.+
T Consensus 15 ~~~~~~i~~~l~~~~I~v~~i~~~~s~~~i--s~~v~~~~~~~~~~~lh~~~ 64 (66)
T cd04922 15 PGVAATFFSALAKANVNIRAIAQGSSERNI--SAVIDEDDATKALRAVHERF 64 (66)
T ss_pred ccHHHHHHHHHHHCCCCEEEEEecCcccEE--EEEEeHHHHHHHHHHHHHHH
Confidence 345677888999999866322111111333 45778888998888887654
No 430
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=35.06 E-value=79 Score=26.55 Aligned_cols=36 Identities=28% Similarity=0.343 Sum_probs=26.6
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
-..++||+|-+.- .|.... .+++.+++++||+.+|-
T Consensus 155 l~Pa~VicEi~~~-dG~mar----~~~~~~fa~~h~l~~it 190 (203)
T COG0108 155 LKPAGVICEIMND-DGTMAR----LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCCcEEEEEEeCC-CccccC----hHHHHHHHHHcCCcEEE
Confidence 3468888886654 344444 78899999999998874
No 431
>KOG3974|consensus
Probab=34.86 E-value=87 Score=27.58 Aligned_cols=47 Identities=6% Similarity=0.162 Sum_probs=35.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
.+.+++.+. .+-|+++=|-.|.. +.--.-++.|.+.|++.++++++|
T Consensus 92 v~~i~k~L~----RlhavVIGPGLGRd---p~~~k~i~~iley~~~~dvP~VID 138 (306)
T KOG3974|consen 92 VDIIEKLLQ----RLHAVVIGPGLGRD---PAILKEIAKILEYLRGKDVPLVID 138 (306)
T ss_pred HhHHHHHHh----heeEEEECCCCCCC---HHHHHHHHHHHHHHhcCCCcEEEc
Confidence 455565554 57889999988863 223345788889999999999999
No 432
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=34.73 E-value=1e+02 Score=25.60 Aligned_cols=45 Identities=4% Similarity=0.089 Sum_probs=27.6
Q ss_pred CeeEEEEcceecCCCcccCC-----------hhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 90 NIATLICEPVFVVHGAVVPP-----------PGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~-----------~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
+...|++|++....-..... ...+..|..+|+++++.+|+ .++.+
T Consensus 103 ~~~lvvIDsi~~l~~~~~~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vi~t~q~~~ 159 (218)
T cd01394 103 KVDLVVVDSATALYRLELGDDDTTIKNYRELAKQLTFLLWLARKHDVAVVITNQVYS 159 (218)
T ss_pred CCcEEEEechHHhhhHHhcCccchHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCEE
Confidence 36789999986541100101 23345678999999988876 44433
No 433
>cd04920 ACT_AKiii-DAPDC_2 ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC). This CD includes the second of two ACT domains of a bifunctional AKIII (LysC)-like aspartokinase/meso-diaminopimelate decarboxylase (DAPDC) bacterial protein. Aspartokinase (AK) is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. The lysA gene encodes the enzyme DAPDC, a pyridoxal-5'-phosphate (PLP)-dependent enzyme which catalyzes the final step in the lysine biosynthetic pathway converting meso-diaminopimelic acid (DAP) to l-lysine. Tandem ACT domains are positioned centrally with the AK catalytic domain N-terminal and the DAPDC domains C-terminal. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=34.65 E-value=1.3e+02 Score=19.62 Aligned_cols=47 Identities=4% Similarity=-0.027 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++.+.|.+.++.+...+..... + ++.+.+++.++++++|.+.+
T Consensus 15 gv~~~~~~~L~~~~i~~i~~~~s~~~--i--s~vv~~~d~~~av~~LH~~f 61 (63)
T cd04920 15 HKLGPALEVFGKKPVHLVSQAANDLN--L--TFVVDEDQADGLCARLHFQL 61 (63)
T ss_pred cHHHHHHHHHhcCCceEEEEeCCCCe--E--EEEEeHHHHHHHHHHHHHHH
Confidence 44667888888888887654433333 3 35778999999999987654
No 434
>cd01122 GP4d_helicase GP4d_helicase is a homohexameric 5'-3' helicases. Helicases couple NTP hydrolysis to the unwinding of nucleic acid duplexes into their component strands.
Probab=34.60 E-value=66 Score=27.78 Aligned_cols=41 Identities=10% Similarity=0.075 Sum_probs=27.1
Q ss_pred CeeEEEEcceecCCCcc---cC----ChhHHHHHHHHHHHhCCEEEEe
Q psy11784 90 NIATLICEPVFVVHGAV---VP----PPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~---~~----~~~~l~~l~~l~~~~g~llI~D 130 (284)
++..||+|+++...... .. -..++..|+.+++++|+.+++=
T Consensus 140 ~~~~vvID~l~~l~~~~~~~~~~~~~~~~~~~~L~~la~~~~vtvll~ 187 (271)
T cd01122 140 GIQHIIIDNLSIMVSDERASGDERKALDEIMTKLRGFATEHGIHITLV 187 (271)
T ss_pred CceEEEECCHHHHhccCCCchhHHHHHHHHHHHHHHHHHHhCCEEEEE
Confidence 57789999986642211 11 1245677999999999866643
No 435
>smart00545 JmjN Small domain found in the jumonji family of transcription factors. To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Probab=34.37 E-value=43 Score=20.53 Aligned_cols=21 Identities=14% Similarity=0.237 Sum_probs=16.8
Q ss_pred ChhHHHHHHHHHHHhCCEEEE
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-+|++.++..+++||+.=|+
T Consensus 15 p~~yi~~i~~~~~~yGi~KIv 35 (42)
T smart00545 15 PLAYISKIRPQAEKYGICKVV 35 (42)
T ss_pred HHHHHHHHHHHHhhCCEEEEE
Confidence 457888999999999987664
No 436
>PRK09485 mmuM homocysteine methyltransferase; Provisional
Probab=34.03 E-value=3.4e+02 Score=24.17 Aligned_cols=33 Identities=15% Similarity=0.121 Sum_probs=22.5
Q ss_pred CCeeEEEEcceecCCCcccCChhHHHHHHHHHHHh--CCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEI--GGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~--g~llI~ 129 (284)
.++-.+++|.+.. ..-++.+.+.+++. +..+++
T Consensus 152 ~gvD~i~~ET~~~--------~~E~~~~~~~~~~~~~~~pv~i 186 (304)
T PRK09485 152 AGADLLACETIPN--------LDEAEALVELLKEEFPGVPAWL 186 (304)
T ss_pred CCCCEEEEeccCC--------HHHHHHHHHHHHHhcCCCcEEE
Confidence 5588899998654 34466777777755 666554
No 437
>PRK09461 ansA cytoplasmic asparaginase I; Provisional
Probab=33.92 E-value=1.1e+02 Score=27.91 Aligned_cols=55 Identities=25% Similarity=0.365 Sum_probs=33.4
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccc
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRS 139 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~ 139 (284)
+.++.+++ .++.++|+|. .|.| .++..+++++.|.++. +.|++++.= .|++.|+.
T Consensus 224 ~~l~~~~~---~~~~GiVl~~-~G~G-n~p~~~~~~~~l~~~~-~~Gi~VV~~-Sr~~~G~v 278 (335)
T PRK09461 224 EVVRNFLR---QPVKALILRS-YGVG-NAPQNPALLQELKEAS-ERGIVVVNL-TQCMSGKV 278 (335)
T ss_pred HHHHHHHh---CCCCEEEEcc-CCCC-CCCCCHHHHHHHHHHH-HCCCEEEEe-CCCCCCcC
Confidence 34555554 4588999998 4543 3344578888888776 457766542 34444443
No 438
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=33.78 E-value=82 Score=23.73 Aligned_cols=51 Identities=18% Similarity=0.150 Sum_probs=34.7
Q ss_pred cHHHHHHHHHHHHCCcEEee----cCC--CCC-EEEEEcCCCCCHHHHHHHHHHHHHHHHHH
Q psy11784 214 TYYLYRYTRRMKEAKIIVAN----EGE--YGN-VLLFLPAMCLTTENVLFIVSTLNRIFTSL 268 (284)
Q Consensus 214 ~~~~~~~~~~l~~~Gv~~~~----~~~--~~~-~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 268 (284)
.+++..+.++|.++|+.+.. ++. .+| ++- ....++++|+.++.+++.+++-
T Consensus 10 d~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTll----iGvede~v~~vl~iIk~~c~~R 67 (109)
T PF06153_consen 10 DEDADDLSDALNENGFRVTKLSSTGGFLREGNTTLL----IGVEDEKVDEVLEIIKENCKKR 67 (109)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEE----EEEEGGGHHHHHHHHHHHH--E
T ss_pred HhhHHHHHHHHHHCCceEEEEecccceeccCCEEEE----EEecHHHHHHHHHHHHHhhcCc
Confidence 46788999999999998753 222 123 332 3678999999999999988763
No 439
>smart00518 AP2Ec AP endonuclease family 2. These endonucleases play a role in DNA repair. Cleave phosphodiester bonds at apurinic or apyrimidinic sites
Probab=33.61 E-value=1.4e+02 Score=25.83 Aligned_cols=9 Identities=0% Similarity=-0.001 Sum_probs=4.0
Q ss_pred HHHHHHHHH
Q psy11784 77 AQAARNIME 85 (284)
Q Consensus 77 ~~~l~~~i~ 85 (284)
++.+++.++
T Consensus 83 ~~~l~~~i~ 91 (273)
T smart00518 83 IERLIDEIK 91 (273)
T ss_pred HHHHHHHHH
Confidence 444444443
No 440
>KOG2170|consensus
Probab=33.54 E-value=77 Score=28.62 Aligned_cols=13 Identities=15% Similarity=0.437 Sum_probs=8.7
Q ss_pred CCccEEEEcCCCcccch
Q psy11784 16 GRQNIVVVDAAYHGTVN 32 (284)
Q Consensus 16 ~r~~il~~~~~yHG~t~ 32 (284)
.|+-+++ |||||.
T Consensus 108 ~KPLvLS----fHG~tG 120 (344)
T KOG2170|consen 108 RKPLVLS----FHGWTG 120 (344)
T ss_pred CCCeEEE----ecCCCC
Confidence 3566665 788875
No 441
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=33.44 E-value=1.3e+02 Score=23.46 Aligned_cols=50 Identities=14% Similarity=0.177 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
.+.++++++..+++...+++.|-. .....+++-+.++++|++|.-+.++|
T Consensus 66 ~~nl~~ii~~~~~~~~ivlv~~~~----~~~~~~~~n~~~~~~a~~~~~v~~id 115 (150)
T cd01840 66 KDQLDELLDALGPDRQVYLVNPHV----PRPWEPDVNAYLLDAAKKYKNVTIID 115 (150)
T ss_pred HHHHHHHHHHcCCCCEEEEEECCC----CcchHHHHHHHHHHHHHHCCCcEEec
Confidence 466777777555445556666641 11224577788899999994344445
No 442
>TIGR02238 recomb_DMC1 meiotic recombinase Dmc1. This model describes DMC1, a subfamily of a larger family of DNA repair and recombination proteins. It is eukaryotic only and most closely related to eukaryotic RAD51. It also resembles archaeal RadA (TIGR02236) and RadB (TIGR02237) and bacterial RecA (TIGR02012). It has been characterized for human as a recombinase active only in meiosis.
Probab=33.14 E-value=1.4e+02 Score=26.95 Aligned_cols=46 Identities=17% Similarity=0.304 Sum_probs=29.8
Q ss_pred CCeeEEEEcceecCC-----C--cccC----ChhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 89 DNIATLICEPVFVVH-----G--AVVP----PPGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 89 ~~vaavi~Epv~~~~-----G--~~~~----~~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
.++..||+|++.+.- | .... -..++..|..++++||+.+++ -.|.+
T Consensus 190 ~~~~LvVIDSisal~r~~~~~~g~~~~r~~~l~~~~~~L~~la~~~~vavvitNqv~~ 247 (313)
T TIGR02238 190 EPFRLLIVDSIMALFRVDFSGRGELSERQQKLAQMLSRLNKISEEFNVAVFVTNQVQA 247 (313)
T ss_pred cCCCEEEEEcchHhhhhhccCccchHHHHHHHHHHHHHHHHHHHHcCcEEEEECceEe
Confidence 358889999987531 1 1100 125677899999999977665 44444
No 443
>PLN03244 alpha-amylase; Provisional
Probab=33.02 E-value=65 Score=32.98 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=27.9
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecccccCcccc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQCGMGRSG 140 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G 140 (284)
+++-|+.+.+.|++.|+-+|+|=|+.-++..+
T Consensus 439 TPeDLK~LVD~aH~~GI~VILDvV~NH~~~d~ 470 (872)
T PLN03244 439 TPDDFKRLVDEAHGLGLLVFLDIVHSYAAADE 470 (872)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecCccCCCcc
Confidence 46779999999999999999999998776654
No 444
>PF05114 DUF692: Protein of unknown function (DUF692); InterPro: IPR007801 The proteins in this entry are functionally uncharacterised.; PDB: 3BWW_A.
Probab=32.81 E-value=43 Score=29.60 Aligned_cols=39 Identities=8% Similarity=0.089 Sum_probs=22.4
Q ss_pred EEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 94 LICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 94 vi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
|++=.+ .+-||.-++++++|+++++++++++..++.|.+
T Consensus 56 v~~HGv~lslG~~~~~d~~~L~~l~~l~~~~~~~~vSeHL 95 (274)
T PF05114_consen 56 VSLHGVGLSLGSADPLDKDYLRRLKALADRLNPPWVSEHL 95 (274)
T ss_dssp EEEB-S---TT-SS---HHHHHHHHHHHHHTT----EE-S
T ss_pred EEEeccccccCCCCCCCHHHHHHHHHHHHHHCCCEEEeEE
Confidence 344444 445778889999999999999999999999964
No 445
>TIGR00259 thylakoid_BtpA membrane complex biogenesis protein, BtpA family. Members of this family are found in C. elegans, Synechocystis sp., E. coli, and several of the Archaea. Members in Cyanobacteria have been shown to play a role in protein complex biogenesis, and designated BtpA (biogenesis of thylakoid protein). Homologs in non-photosynthetic species, where thylakoid intracytoplasmic membranes are lacking, are likely to act elsewhere in membrane protein biogenesis.
Probab=32.79 E-value=2.4e+02 Score=24.73 Aligned_cols=64 Identities=16% Similarity=0.135 Sum_probs=32.8
Q ss_pred eEEccCCCCcCCCCCCCchHHHHHHHHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHH
Q psy11784 52 VHVIPFPDTYRGEFSADDPQAAQKYAQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYI 120 (284)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~ 120 (284)
+|..|.|..+++ ..+-++..+...++.+.+- ..++-+||+|-....--....+++....+..++
T Consensus 8 vHl~pLPGsP~~--~~~~~~i~e~A~~ea~~l~---~~GvD~viveN~~d~P~~~~~~p~tva~m~~i~ 71 (257)
T TIGR00259 8 VHLLPLPGSPSF--DDNLNAVIDKAWKDAMALE---EGGVDAVMFENFFDAPFLKEVDPETVAAMAVIA 71 (257)
T ss_pred EcCCCCCCCCCC--CCCHHHHHHHHHHHHHHHH---hCCCCEEEEecCCCCCCcCCCCHHHHHHHHHHH
Confidence 455677766665 2232333333344444333 366999999976543211123455555555554
No 446
>TIGR02237 recomb_radB DNA repair and recombination protein RadB. This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA (TIGR02012), eukaryotic RAD51 (TIGR02239) and DMC1 (TIGR02238), and archaeal RadA (TIGR02236).
Probab=32.70 E-value=1.5e+02 Score=24.39 Aligned_cols=56 Identities=9% Similarity=0.178 Sum_probs=32.1
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCC-cccCC--------hhHHHHHHHHHHHhCCEEEEe-cccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHG-AVVPP--------PGWLSLMYDYIHEIGGVVIAD-EIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G-~~~~~--------~~~l~~l~~l~~~~g~llI~D-Ev~t 134 (284)
++.+.+.+.. .++..||+|++..--- ..... ..++..|..+++++|+.+++= ++.+
T Consensus 86 ~~~l~~~~~~--~~~~lvVIDSis~l~~~~~~~~~~~~~~~l~~~~~~L~~~~~~~~v~vl~t~~~~~ 151 (209)
T TIGR02237 86 IQKTSKFIDR--DSASLVVVDSFTALYRLELSDDRISRNRELARQLTLLLSLARKKNLAVVITNQVYT 151 (209)
T ss_pred HHHHHHHHhh--cCccEEEEeCcHHHhHHHhCCccHHHHHHHHHHHHHHHHHHHHcCCEEEEEcccEE
Confidence 4445555542 2577899999865311 10101 123456888899999877754 4433
No 447
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=32.69 E-value=1.6e+02 Score=23.45 Aligned_cols=52 Identities=12% Similarity=0.174 Sum_probs=29.2
Q ss_pred HHHHHHHHH---hcCCCeeEEEEcceecCCCc------ccCChhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIME---AHRDNIATLICEPVFVVHGA------VVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~---~~~~~vaavi~Epv~~~~G~------~~~~~~~l~~l~~l~~~~g~llI 128 (284)
.+.++++++ +..++...+++-|.+-.... ......+-+.++++|+++|+.+|
T Consensus 92 ~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~v 152 (188)
T cd01827 92 KKDYETMIDSFQALPSKPKIYICYPIPAYYGDGGFINDNIIKKEIQPMIDKIAKKLNLKLI 152 (188)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEeCCcccccCCCccchHHHHHHHHHHHHHHHHHcCCcEE
Confidence 344555554 33344555666665321111 11124567789999999998876
No 448
>PF12138 Spherulin4: Spherulation-specific family 4; InterPro: IPR021986 This protein is found in bacteria, archaea and eukaryotes. Proteins in this family are typically between 250 and 398 amino acids in length. There is a conserved NPG sequence motif and there are two completely conserved G residues that may be functionally important. Starvation will often induce spherulation - the production of spores - and this process may involve DNA-methylation. Changes in the methylation of spherulin4 are associated with the formation of spherules, but these changes are probably transient. Methylation of the gene accompanies its transcriptional activation, and spherulin4 mRNA is only detectable in late spherulating cultures and mature spherules. It is a spherulation-specific protein.
Probab=32.59 E-value=1.3e+02 Score=26.27 Aligned_cols=51 Identities=14% Similarity=0.049 Sum_probs=37.2
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCC--cccCChhHHHHHHHHHHHhCCEEE
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHG--AVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G--~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
+.|.+.+..++.-.-.||+.|-.|-|. .-.+.+.|...|.+|-+.-|+.+|
T Consensus 19 ~~l~~a~~~~p~~~f~vIiNP~sGPG~~~~~~pd~~Y~~~i~~L~~~~nv~vl 71 (253)
T PF12138_consen 19 DPLYDAIAAHPSVPFTVIINPNSGPGSAPDPWPDANYAAAIPRLNSYANVRVL 71 (253)
T ss_pred HHHHHHHhcCCCCcEEEEEcCCCCCCCCCCCCCCHHHHHHHHHHHhcCCCcEE
Confidence 445555665655567899999877763 344899999999999877776555
No 449
>TIGR00789 flhB_rel flhB C-terminus-related protein. This model describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set.
Probab=32.27 E-value=40 Score=23.97 Aligned_cols=23 Identities=9% Similarity=0.033 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCEEEEecccc
Q psy11784 112 WLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 112 ~l~~l~~l~~~~g~llI~DEv~t 134 (284)
.-++|+++++++|++++-|...+
T Consensus 28 ~A~~I~~~A~e~~VPi~~~~~LA 50 (82)
T TIGR00789 28 VAERIIEIAKKHGIPIVEDPDLV 50 (82)
T ss_pred HHHHHHHHHHHcCCCEEeCHHHH
Confidence 36899999999999999998765
No 450
>PF00586 AIRS: AIR synthase related protein, N-terminal domain; InterPro: IPR000728 This family includes Hydrogen expression/formation protein, HypE, which may be involved in the maturation of NifE hydrogenase; AIR synthase and FGAM synthase, which are involved in de novo purine biosynthesis; and selenide, water dikinase, an enzyme which synthesizes selenophosphate from selenide and ATP.; GO: 0003824 catalytic activity; PDB: 3VIU_A 2Z1T_A 2Z1U_A 3C9U_B 3C9S_A 3C9R_A 1VQV_A 3C9T_B 3M84_A 3QTY_A ....
Probab=32.15 E-value=53 Score=23.51 Aligned_cols=19 Identities=11% Similarity=0.102 Sum_probs=15.5
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
.++++.+.+.|+++|+.++
T Consensus 74 ~~~~~Gi~~~~~~~g~~iv 92 (96)
T PF00586_consen 74 KEIVKGIAEACREFGIPIV 92 (96)
T ss_dssp HHHHHHHHHHHHHHT-EEE
T ss_pred HHHHHHHHHHHHHhCCcEe
Confidence 5678888999999999887
No 451
>cd07581 nitrilase_3 Uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=31.35 E-value=1.1e+02 Score=26.13 Aligned_cols=20 Identities=25% Similarity=0.346 Sum_probs=17.5
Q ss_pred hhHHHHHHHHHHHhCCEEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~ 129 (284)
..+++.++++|+++++.+++
T Consensus 60 ~~~~~~l~~~a~~~~i~iv~ 79 (255)
T cd07581 60 GPFVSALARLARELGITVVA 79 (255)
T ss_pred CHHHHHHHHHHHHcCeEEEE
Confidence 46899999999999998885
No 452
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=30.80 E-value=1.3e+02 Score=23.71 Aligned_cols=52 Identities=12% Similarity=0.100 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhc-CCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEE
Q psy11784 76 YAQAARNIMEAH-RDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 76 ~~~~l~~~i~~~-~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
+.+.++++++.. ..+...|++.+. ....+. .....+-+.++++|+++++.++
T Consensus 86 ~~~~l~~li~~~~~~~~~vil~~~~~~~~~~~-~~~~~~~~~~~~~a~~~~~~~~ 139 (177)
T cd01822 86 TRANLRQMIETAQARGAPVLLVGMQAPPNYGP-RYTRRFAAIYPELAEEYGVPLV 139 (177)
T ss_pred HHHHHHHHHHHHHHCCCeEEEEecCCCCccch-HHHHHHHHHHHHHHHHcCCcEe
Confidence 344555555521 123444555532 222121 1235778889999999998766
No 453
>cd02691 PurM-like2 AIR synthase (PurM) related protein, archaeal subgroup 2 of unknown function. The family of PurM related proteins includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM synthase and Selenophosphate synthetase (SelD). They all contain two conserved domains and seem to dimerize. The N-terminal domain forms the dimer interface and is a putative ATP binding domain.
Probab=30.76 E-value=80 Score=28.87 Aligned_cols=53 Identities=23% Similarity=0.315 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHhCCEEE-----E--------eccc---ccCccccCccccccccCCCC-cEEEecccccCC
Q psy11784 111 GWLSLMYDYIHEIGGVVI-----A--------DEIQ---CGMGRSGSHFWAFQTQGAVP-DIITVGKPMGNG 165 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI-----~--------DEv~---tG~gr~G~~~~a~~~~g~~p-Div~~sK~l~~G 165 (284)
++++.+.+.|++||+.++ . +++. |.+|...+ . .....+.+| |.+++.|.++++
T Consensus 106 ~i~~Gi~~a~~~~gv~lvGGdT~~~~~~~~~~~~l~~svT~iG~~~~-~-~~~r~gA~pGD~I~vtg~~Gg~ 175 (346)
T cd02691 106 DFTAGVTAVSEATGVPLVAGSTLRIGGDMVLGDRLVGGVGAVGRSKS-D-PSRRKNAEPGDLILMTEGAGGG 175 (346)
T ss_pred HHHHHHHHHHHHcCCeEEeeeeEEecCCcccCCceEEEEEEEEEecc-c-cccccCCCCCCEEEEECCccHH
Confidence 467889999999999999 1 1221 22343222 1 111235555 788888888754
No 454
>PLN02438 inositol-3-phosphate synthase
Probab=30.55 E-value=34 Score=32.78 Aligned_cols=57 Identities=16% Similarity=0.268 Sum_probs=38.8
Q ss_pred HHHHHHHHHhcCCCee-------EEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEeccccc
Q psy11784 77 AQAARNIMEAHRDNIA-------TLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCG 135 (284)
Q Consensus 77 ~~~l~~~i~~~~~~va-------avi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG 135 (284)
++.|++.|+....+++ |.|-|.+.--+| .|+..|...+.++++++|++++=|+..||
T Consensus 247 ~~~l~~ai~~~~~eispS~~YA~AAl~eG~~fVNg--sP~~t~vP~~~elA~~~gvpi~GDD~KSG 310 (510)
T PLN02438 247 MENLLASIEKDEAEISPSTLYALACILEGVPFING--SPQNTFVPGVIELAVKKNSLIGGDDFKSG 310 (510)
T ss_pred HHHHHHHHhcCCCcCChHHHHHHHHHHcCCCeEec--CCccccChhhHHHHHHcCCCEecccccCC
Confidence 6788888874433321 233454433233 34456788999999999999999998884
No 455
>PRK09505 malS alpha-amylase; Reviewed
Probab=30.42 E-value=1.8e+02 Score=29.39 Aligned_cols=29 Identities=21% Similarity=0.197 Sum_probs=24.5
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecccccCc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQCGMG 137 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~tG~g 137 (284)
+.+-|++|.+.|+++|+-+|+|=|..-.+
T Consensus 290 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 318 (683)
T PRK09505 290 TEADLRTLVDEAHQRGIRILFDVVMNHTG 318 (683)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCCc
Confidence 44689999999999999999999975443
No 456
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=30.14 E-value=58 Score=27.73 Aligned_cols=48 Identities=15% Similarity=0.136 Sum_probs=29.9
Q ss_pred HHHHHHHHHhcCCC-eeEEEE-cceecCCCcccCChhHHHHHHHHHHHhCCEEEEec
Q psy11784 77 AQAARNIMEAHRDN-IATLIC-EPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADE 131 (284)
Q Consensus 77 ~~~l~~~i~~~~~~-vaavi~-Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DE 131 (284)
++.++++++ .+ +.+|.+ |.-... .--....++++++|++||+.||+++
T Consensus 29 ~~~l~~al~---~G~v~~vQlR~K~l~~----~~~~~~a~~l~~l~~~~gv~liINd 78 (221)
T PRK06512 29 AKLLRAALQ---GGDVASVILPQYGLDE----ATFQKQAEKLVPVIQEAGAAALIAG 78 (221)
T ss_pred HHHHHHHHc---CCCccEEEEeCCCCCH----HHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 566666665 45 566654 332211 0012346889999999999999875
No 457
>TIGR03156 GTP_HflX GTP-binding protein HflX. This protein family is one of a number of homologous small, well-conserved GTP-binding proteins with pleiotropic effects. Bacterial members are designated HflX, following the naming convention in Escherichia coli where HflX is encoded immediately downstream of the RNA chaperone Hfq, and immediately upstream of HflKC, a membrane-associated protease pair with an important housekeeping function. Over large numbers of other bacterial genomes, the pairing with hfq is more significant than with hflK and hlfC. The gene from Homo sapiens in this family has been named PGPL (pseudoautosomal GTP-binding protein-like).
Probab=30.03 E-value=1.6e+02 Score=27.03 Aligned_cols=57 Identities=12% Similarity=0.110 Sum_probs=42.2
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCC-EEEEeccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGG-VVIADEIQ 133 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~-llI~DEv~ 133 (284)
+++++++.+..+-++.+.++-+...........++-+++|.+++++.++ ++|+|+-.
T Consensus 19 ~~E~~~L~~~~~~~v~~~~~~~~~~~~~~~~~g~gk~~e~~~~~~~~~~~~vi~~~~l 76 (351)
T TIGR03156 19 LEELAELAETAGAEVVGTVTQKRSRPDPATYIGKGKVEEIAELVEELEADLVIFDHEL 76 (351)
T ss_pred HHHHHHHHHHCCCEEEEEEEEecCCCCCCeEecccHHHHHHHHHHhcCCCEEEECCCC
Confidence 7888888876655677766665544444456678889999999999887 78888753
No 458
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=30.01 E-value=1.4e+02 Score=25.03 Aligned_cols=41 Identities=15% Similarity=0.212 Sum_probs=29.7
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.+.+++++. .++-+||+.|..... +..+.+-|++.|+.+|+
T Consensus 45 ~~~i~~~i~---~~~d~Iiv~~~~~~~---------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 45 IEQIEQAIS---QGVDGIIVSPVDPDS---------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHHH---TTESEEEEESSSTTT---------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHH---hcCCEEEecCCCHHH---------HHHHHHHHhhcCceEEE
Confidence 567777776 448899999876532 33455668899999887
No 459
>PF07505 Gp37_Gp68: Phage protein Gp37/Gp68; InterPro: IPR011101 This entry is represented by Burkholderia phage phiE125, Gp37. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=29.66 E-value=88 Score=27.47 Aligned_cols=43 Identities=23% Similarity=0.359 Sum_probs=33.4
Q ss_pred CCCeeEEEEcceecCC---------------------CcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 88 RDNIATLICEPVFVVH---------------------GAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~---------------------G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
+..+..|.+||..|.- +.++..+++.+.|++-|+++|+.+.+=
T Consensus 164 pa~~rflS~EPLLg~i~l~~~~~~~IdWVIvGGESG~~ARp~~~~Wvr~irdqC~~~gvpFffK 227 (261)
T PF07505_consen 164 PAKVRFLSCEPLLGPIDLSKLDLEGIDWVIVGGESGPGARPMHPDWVRSIRDQCAAAGVPFFFK 227 (261)
T ss_pred CccEEEEEeccccCCcCcccccCCCCCEEEECCCcCCCCCcCCHHHHHHHHHHHHHcCCcEEEE
Confidence 4457777888765421 356778899999999999999999886
No 460
>COG0542 clpA ATP-binding subunits of Clp protease and DnaK/DnaJ chaperones [Posttranslational modification, protein turnover, chaperones]
Probab=29.64 E-value=41 Score=34.25 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=18.0
Q ss_pred hHHHHHHHHHHHh----CCEEEEecccccC
Q psy11784 111 GWLSLMYDYIHEI----GGVVIADEIQCGM 136 (284)
Q Consensus 111 ~~l~~l~~l~~~~----g~llI~DEv~tG~ 136 (284)
+|-++|..+-++- ++.|.+||+||=.
T Consensus 246 eFEeRlk~vl~ev~~~~~vILFIDEiHtiV 275 (786)
T COG0542 246 EFEERLKAVLKEVEKSKNVILFIDEIHTIV 275 (786)
T ss_pred cHHHHHHHHHHHHhcCCCeEEEEechhhhc
Confidence 4555555555443 6999999999933
No 461
>PRK08760 replicative DNA helicase; Provisional
Probab=29.57 E-value=1.3e+02 Score=28.91 Aligned_cols=41 Identities=10% Similarity=0.059 Sum_probs=26.5
Q ss_pred CCeeEEEEcceecCCCccc-CC-----hhHHHHHHHHHHHhCCEEEE
Q psy11784 89 DNIATLICEPVFVVHGAVV-PP-----PGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~~-~~-----~~~l~~l~~l~~~~g~llI~ 129 (284)
.++..||||.+|-+..... -. .+..+.|..+|+++++++|+
T Consensus 338 ~~~~lVvIDyLql~~~~~~~~~r~~ei~~Isr~LK~lAkel~ipVi~ 384 (476)
T PRK08760 338 HDLGLIVIDYLQLMSVPGNSENRATEISEISRSLKGLAKELNVPVIA 384 (476)
T ss_pred cCCCEEEEecHHhcCCCCCCcccHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 3477888888765521100 11 24568888899999988875
No 462
>PF08423 Rad51: Rad51; InterPro: IPR013632 This domain is found at the C terminus of the DNA repair and recombination protein Rad51. It is critical for DNA binding []. Rad51 is a homologue of the bacterial RecA protein. Rad51 and RecA share a core ATPase domain.; PDB: 2ZUC_A 2Z43_C 2ZUD_B 2DFL_A 2ZUB_A 2BKE_A 2KZ3_A 2CVH_B 2CVF_B 1SZP_D ....
Probab=29.23 E-value=1.5e+02 Score=25.66 Aligned_cols=59 Identities=5% Similarity=0.219 Sum_probs=34.2
Q ss_pred HHHHHHHHHHhcCCCeeEEEEcceecC-------CCcccCC----hhHHHHHHHHHHHhCCEE-EEecccccC
Q psy11784 76 YAQAARNIMEAHRDNIATLICEPVFVV-------HGAVVPP----PGWLSLMYDYIHEIGGVV-IADEIQCGM 136 (284)
Q Consensus 76 ~~~~l~~~i~~~~~~vaavi~Epv~~~-------~G~~~~~----~~~l~~l~~l~~~~g~ll-I~DEv~tG~ 136 (284)
.++.+...+. ..++..||+|++..- .|...-. ..++..|+.++++|++.+ |.-.|.+-+
T Consensus 121 ~L~~l~~~l~--~~~ikLIVIDSIaalfr~e~~~~~~~~~R~~~L~~~~~~L~~lA~~~~iaVvvTNqv~~~~ 191 (256)
T PF08423_consen 121 LLEQLPKLLS--ESKIKLIVIDSIAALFRSEFSGRGDLAERQRMLARLARILKRLARKYNIAVVVTNQVTTKI 191 (256)
T ss_dssp HHHHHHHHHH--HSCEEEEEEETSSHHHHHHSGSTTTHHHHHHHHHHHHHHHHHHHHHTT-EEEEEEEECSST
T ss_pred HHHHHHhhcc--ccceEEEEecchHHHHHHHHccchhhHHHHHHHHHHHHHHHHHHHhCCceEEeeceeeecC
Confidence 3445555554 245999999998431 1221111 235556999999999664 555565543
No 463
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=29.23 E-value=51 Score=28.56 Aligned_cols=29 Identities=21% Similarity=0.091 Sum_probs=23.8
Q ss_pred hhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
.+-+++|.+.|+++|+-+|+|=|..-.+.
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~~ 79 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTSD 79 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEET
T ss_pred hhhhhhhhhccccccceEEEeeecccccc
Confidence 35689999999999999999999753333
No 464
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=29.18 E-value=1.7e+02 Score=23.26 Aligned_cols=19 Identities=21% Similarity=0.281 Sum_probs=15.0
Q ss_pred hhHHHHHHHHHHHhCCEEE
Q psy11784 110 PGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI 128 (284)
..|-+.++++|+++++.+|
T Consensus 124 ~~~n~~~~~~a~~~~v~~v 142 (183)
T cd04501 124 KSLNRWLKDYARENGLLFL 142 (183)
T ss_pred HHHHHHHHHHHHHcCCCEE
Confidence 4677789999999986655
No 465
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase. Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.
Probab=29.09 E-value=1.5e+02 Score=28.87 Aligned_cols=49 Identities=10% Similarity=0.030 Sum_probs=35.8
Q ss_pred CCeeEEEEcceecCC----Cccc----------CChhHHHHHHHHHHHhCCEEEEecccccCc
Q psy11784 89 DNIATLICEPVFVVH----GAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMG 137 (284)
Q Consensus 89 ~~vaavi~Epv~~~~----G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 137 (284)
-++-+|.+-|++-.. |.-+ -+.+-|++|.+.|+++|+-+|+|=|....+
T Consensus 39 lG~~~i~l~Pi~~~~~~~~gY~~~d~~~id~~~Gt~~~~~~lv~~ah~~gi~vilD~v~NH~~ 101 (543)
T TIGR02403 39 LGVDYIWLNPFYVSPQKDNGYDVSDYYAINPLFGTMADFEELVSEAKKRNIKIMLDMVFNHTS 101 (543)
T ss_pred cCCCEEEECCcccCCCCCCCCCccccCccCcccCCHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 468899999985532 2111 133669999999999999999998866443
No 466
>TIGR00416 sms DNA repair protein RadA. The gene protuct codes for a probable ATP-dependent protease involved in both DNA repair and degradation of proteins, peptides, glycopeptides. Also known as sms. Residues 11-28 of the SEED alignment contain a putative Zn binding domain. Residues 110-117 of the seed contain a putative ATP binding site both documented in Haemophilus and in Listeria monocytogenes. for E.coli see ( J. BACTERIOL. 178:5045-5048(1996)).
Probab=29.07 E-value=1e+02 Score=29.40 Aligned_cols=51 Identities=10% Similarity=0.075 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC--------CcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH--------GAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~--------G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+.+.+++. +...||+|++|... |...--.+++..|.++++++|+.+++
T Consensus 159 ~~~I~~~i~~~--~~~~vVIDSIq~l~~~~~~~~~g~~~q~r~~~~~L~~~ak~~giTvll 217 (454)
T TIGR00416 159 WEQICANIEEE--NPQACVIDSIQTLYSPDISSAPGSVSQVRECTAELMRLAKTRGIAIFI 217 (454)
T ss_pred HHHHHHHHHhc--CCcEEEEecchhhcccccccCCCCHHHHHHHHHHHHHHHHHhCCEEEE
Confidence 45555555532 35679999998742 11111235667799999999975554
No 467
>TIGR03600 phage_DnaB phage replicative helicase, DnaB family, HK022 subfamily. Members of this family are phage (or prophage-region) homologs of the bacterial homohexameric replicative helicase DnaB. Some phage may rely on host DnaB, while others encode their own verions. This model describes the largest phage-specific clade among the close homologs of DnaB, but there are, or course, other DnaB homologs from phage that fall outside the scope of this model.
Probab=29.06 E-value=1.5e+02 Score=27.60 Aligned_cols=41 Identities=7% Similarity=0.022 Sum_probs=28.0
Q ss_pred CeeEEEEcceecCCCcccCCh-----hHHHHHHHHHHHhCCEEEEe
Q psy11784 90 NIATLICEPVFVVHGAVVPPP-----GWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 90 ~vaavi~Epv~~~~G~~~~~~-----~~l~~l~~l~~~~g~llI~D 130 (284)
++..||+|.+|-..+....+. ...+.|+.+|+++++++|+=
T Consensus 305 ~~~lvvIDyLql~~~~~~~~~~~~~~~i~~~Lk~lAke~~i~Vi~l 350 (421)
T TIGR03600 305 GLDLIVVDYIQLMAPTRGRDRNEELGGISRGLKALAKELDVPVVLL 350 (421)
T ss_pred CCCEEEEecccccCCCCCCCHHHHHHHHHHHHHHHHHHhCCcEEEe
Confidence 577899999877643111111 35578899999999988863
No 468
>COG3964 Predicted amidohydrolase [General function prediction only]
Probab=28.60 E-value=69 Score=28.87 Aligned_cols=55 Identities=25% Similarity=0.340 Sum_probs=36.6
Q ss_pred EEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccCccccCcccccc------ccCCCCcEE
Q psy11784 94 LICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGMGRSGSHFWAFQ------TQGAVPDII 156 (284)
Q Consensus 94 vi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~~a~~------~~g~~pDiv 156 (284)
||.-...|..+....+.+-+....+.|++.|+ |+|--| |+ + .|++. ..|+-||++
T Consensus 211 IitHcfngkpn~~l~~dg~vr~~vrra~erGV--~fD~gh---G~-a--sfsf~vAr~aia~GllP~~I 271 (386)
T COG3964 211 IITHCFNGKPNTILTDDGVVRAEVRRARERGV--IFDAGH---GR-A--SFSFNVARRAIANGLLPDII 271 (386)
T ss_pred eeeeeccCCCCCccccchhHHHHHHHHHhcce--EEEccC---Cc-c--eeeHHHHHHHHhcCCCccee
Confidence 34444456666778888999999999999995 677444 22 2 23433 257888875
No 469
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=28.50 E-value=2.1e+02 Score=22.61 Aligned_cols=53 Identities=8% Similarity=0.179 Sum_probs=30.5
Q ss_pred HHHHHHHHHHh---cCCCeeEEEEcceecCCCcc---------cCChhHHHHHHHHHHHhCCEEE
Q psy11784 76 YAQAARNIMEA---HRDNIATLICEPVFVVHGAV---------VPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 76 ~~~~l~~~i~~---~~~~vaavi~Epv~~~~G~~---------~~~~~~l~~l~~l~~~~g~llI 128 (284)
+.+.++++++. ..++...|++.|........ ..-..|-+.++++|+++++.+|
T Consensus 87 ~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 151 (191)
T cd01834 87 FKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDPLPDGAEYNANLAAYADAVRELAAENGVAFV 151 (191)
T ss_pred HHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCCCCChHHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 34555555552 23445556777764432211 1123556778889999997776
No 470
>PRK14105 selenophosphate synthetase; Provisional
Probab=28.33 E-value=1.1e+02 Score=27.73 Aligned_cols=52 Identities=23% Similarity=0.441 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHhCCEEEEecc-----------cccCccccCccccccccCCCC-cEEEecccccC
Q psy11784 110 PGWLSLMYDYIHEIGGVVIADEI-----------QCGMGRSGSHFWAFQTQGAVP-DIITVGKPMGN 164 (284)
Q Consensus 110 ~~~l~~l~~l~~~~g~llI~DEv-----------~tG~gr~G~~~~a~~~~g~~p-Div~~sK~l~~ 164 (284)
+++++.+.+.|++||+.||==+. .||+|..++ .....+.+| |.+++.|.+|.
T Consensus 116 ~~i~~Gi~~~~~~~gv~lvGGdT~~~~~~~l~~svtg~g~~~~---~i~r~ga~~GD~I~vTg~lG~ 179 (345)
T PRK14105 116 KEMLQGFQDFCRENDTTIIGGHTILNPWPLIGGAVTGVGKEED---ILTKAGAKEGDVLILTKPLGT 179 (345)
T ss_pred HHHHHHHHHHHHHhCCEEEeeeeccCCCCEEEEEEEEEEcccc---eeeCCCCCCCCEEEEeCCChH
Confidence 37788889999999998873332 234442222 122345555 88999998884
No 471
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=28.33 E-value=1.2e+02 Score=24.33 Aligned_cols=53 Identities=19% Similarity=0.191 Sum_probs=30.4
Q ss_pred HHHHHHHHHHh---cCCCeeEEEEcceecCCCc---------------ccCChhHHHHHHHHHHHhCCEEE
Q psy11784 76 YAQAARNIMEA---HRDNIATLICEPVFVVHGA---------------VVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 76 ~~~~l~~~i~~---~~~~vaavi~Epv~~~~G~---------------~~~~~~~l~~l~~l~~~~g~llI 128 (284)
+.+.++++++. ...+...+++.|....... ...-..|-+.++++|+++++.+|
T Consensus 90 ~~~~~~~~i~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~i 160 (199)
T cd01838 90 YKENLRKIVSHLKSLSPKTKVILITPPPVDEEAWEKSLEDGGSQPGRTNELLKQYAEACVEVAEELGVPVI 160 (199)
T ss_pred HHHHHHHHHHHHHhhCCCCeEEEeCCCCCCHHHHhhhhccccCCccccHHHHHHHHHHHHHHHHHhCCcEE
Confidence 34455555552 2245667777775422111 01112566678999999997776
No 472
>PF02679 ComA: (2R)-phospho-3-sulfolactate synthase (ComA); InterPro: IPR003830 Methanogenic archaea produce methane via the anaerobic reduction of acetate or single carbon compounds []. Coenzyme M (CoM; 2-mercaptoethanesulphonic acid) serves as the terminal methyl carrier for this process. Previously thought to be unique to methanogenic archaea, CoM has also been found in methylotrophic bacteria. Biosynthesis of CoM begins with the Michael addition of sulphite to phosphoenolpyruvate, forming 2-phospho-3-sulpholactate (PSL). This reaction is catalyzed by members of this family, PSL synthase (ComA) []. Subsequently, PSL is dephosphorylated by phosphosulpholactate phosphatase (ComB) to form 3-sulpholactate [], which is then converted to 3-sulphopyruvate by L-sulpholactate dehydrogenase (ComC; 1.1.1.272 from EC) []. Sulphopyruvate decarboxylase (ComDE; 4.1.1.79 from EC) converts 3-sulphopyruvate to sulphoacetaldehyde []. Reductive thiolation of sulphoacetaldehyde is the final step.; GO: 0019295 coenzyme M biosynthetic process; PDB: 1U83_A 1QWG_A.
Probab=28.15 E-value=47 Score=28.83 Aligned_cols=49 Identities=16% Similarity=0.127 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcce-ecCCCcccCChhHHHHHHHHHHHhCCEEEEe
Q psy11784 77 AQAARNIMEAHRDNIATLICEPV-FVVHGAVVPPPGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv-~~~~G~~~~~~~~l~~l~~l~~~~g~llI~D 130 (284)
...++++++..+ =.++-+ .|-|=....|++.|++..+++++||+.+..-
T Consensus 24 ~~~~~dlLe~ag-----~yID~~K~g~Gt~~l~~~~~l~eki~l~~~~gV~v~~G 73 (244)
T PF02679_consen 24 LRYLEDLLESAG-----DYIDFLKFGWGTSALYPEEILKEKIDLAHSHGVYVYPG 73 (244)
T ss_dssp HHHHHHHHHHHG-----GG-SEEEE-TTGGGGSTCHHHHHHHHHHHCTT-EEEE-
T ss_pred HHHHHHHHHHhh-----hhccEEEecCceeeecCHHHHHHHHHHHHHcCCeEeCC
Confidence 567777777322 223444 4545567889999999999999999976543
No 473
>PLN02978 pyridoxal kinase
Probab=28.14 E-value=1.1e+02 Score=27.31 Aligned_cols=33 Identities=18% Similarity=0.430 Sum_probs=16.7
Q ss_pred EEEcceecCCCcccCChhHHHHHHH-HHHHhCCE
Q psy11784 94 LICEPVFVVHGAVVPPPGWLSLMYD-YIHEIGGV 126 (284)
Q Consensus 94 vi~Epv~~~~G~~~~~~~~l~~l~~-l~~~~g~l 126 (284)
+++||+.+..|....+++..+.+++ ++..-+++
T Consensus 120 vvlDPvm~d~G~l~~~~~~~~~~~~~ll~~adii 153 (308)
T PLN02978 120 YVCDPVLGDEGKLYVPPELVPVYREKVVPLATML 153 (308)
T ss_pred EEECCcccCCCCccCChhHHHHHHHHHHhhCCee
Confidence 4566666555544444555555543 55444433
No 474
>cd07579 nitrilase_1_R2 Second nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the second of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=27.76 E-value=1.3e+02 Score=26.26 Aligned_cols=53 Identities=11% Similarity=0.080 Sum_probs=30.4
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCCccc-------CChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHGAVV-------PPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G~~~-------~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+++++++....=+-+|+=|-....|... .+..+++.+.++++++++.+|+
T Consensus 17 l~~~~~~i~~A~~~gadlvvfPE~~ltG~~~~~~~~~~~~~~~~~~l~~lA~~~~i~iv~ 76 (279)
T cd07579 17 LATIDRLAAEAKATGAELVVFPELALTGLDDPASEAESDTGPAVSALRRLARRLRLYLVA 76 (279)
T ss_pred HHHHHHHHHHHHHCCCCEEEeCCccccCCCChHHhcccCCCHHHHHHHHHHHHcCeEEEE
Confidence 4455555542211112344445444444321 2346899999999999998875
No 475
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=27.70 E-value=2.3e+02 Score=22.07 Aligned_cols=52 Identities=15% Similarity=0.063 Sum_probs=29.4
Q ss_pred HHHHHHHHH---hcCCCeeEEEEcceecC--C-CcccCChhHHHHHHHHHHHhCCEEE
Q psy11784 77 AQAARNIME---AHRDNIATLICEPVFVV--H-GAVVPPPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 77 ~~~l~~~i~---~~~~~vaavi~Epv~~~--~-G~~~~~~~~l~~l~~l~~~~g~llI 128 (284)
.+.++++++ +..++.-.+++-|.... . .....-.++-+.++++|+++|+.+|
T Consensus 71 ~~~l~~li~~~~~~~~~~~vi~~~~~p~~~~~~~~~~~~~~~n~~l~~~a~~~~~~~i 128 (169)
T cd01828 71 VANYRTILEKLRKHFPNIKIVVQSILPVGELKSIPNEQIEELNRQLAQLAQQEGVTFL 128 (169)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCCcCccCcCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 444555444 22244555565554332 1 1112225678889999999998776
No 476
>PLN02361 alpha-amylase
Probab=27.60 E-value=1.6e+02 Score=27.62 Aligned_cols=57 Identities=9% Similarity=0.063 Sum_probs=38.7
Q ss_pred HHHHHHHH-hcCCCeeEEEEcceecC---CCcccC----------ChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 78 QAARNIME-AHRDNIATLICEPVFVV---HGAVVP----------PPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 78 ~~l~~~i~-~~~~~vaavi~Epv~~~---~G~~~~----------~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
+.|.+.++ ...-++-+|.+-|++-. .|..+. +.+-|+.|.+.|+++|+-+|+|=|..
T Consensus 29 ~~i~~kl~~l~~lG~t~iwl~P~~~~~~~~GY~~~d~y~~~~~~Gt~~el~~li~~~h~~gi~vi~D~V~N 99 (401)
T PLN02361 29 RNLEGKVPDLAKSGFTSAWLPPPSQSLAPEGYLPQNLYSLNSAYGSEHLLKSLLRKMKQYNVRAMADIVIN 99 (401)
T ss_pred HHHHHHHHHHHHcCCCEEEeCCCCcCCCCCCCCcccccccCcccCCHHHHHHHHHHHHHcCCEEEEEEccc
Confidence 34444443 12356889999997532 232221 34679999999999999999999964
No 477
>PRK11823 DNA repair protein RadA; Provisional
Probab=27.57 E-value=1e+02 Score=29.29 Aligned_cols=51 Identities=10% Similarity=0.096 Sum_probs=31.8
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCCC--------cccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVHG--------AVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~G--------~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
++.+.+.+++ .++..||+|+++...- ....-.+++..|.++++++|+.+++
T Consensus 145 l~~i~~~i~~--~~~~lVVIDSIq~l~~~~~~~~~g~~~qvr~~~~~L~~~ak~~~itvil 203 (446)
T PRK11823 145 LEAILATIEE--EKPDLVVIDSIQTMYSPELESAPGSVSQVRECAAELMRLAKQRGIAVFL 203 (446)
T ss_pred HHHHHHHHHh--hCCCEEEEechhhhccccccCCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 4445555542 2466799999986421 1111134566899999999986665
No 478
>PRK13600 putative ribosomal protein L7Ae-like; Provisional
Probab=27.40 E-value=49 Score=23.65 Aligned_cols=30 Identities=10% Similarity=0.018 Sum_probs=24.9
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecccccCcc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEIQCGMGR 138 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv~tG~gr 138 (284)
++.....|..+|+++|+.++.-+-+.-+|+
T Consensus 40 ~~~vv~~l~~lceek~Ip~v~V~s~~~LGk 69 (84)
T PRK13600 40 EVYLMTRVLSQINQKNIPVSFFKSKHALGK 69 (84)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCHHHHHH
Confidence 345789999999999999999988875544
No 479
>cd04924 ACT_AK-Arch_2 ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). Included in this CD is the second of two ACT domains of a monofunctional aspartokinase found mostly in Archaea species (ACT_AK-Arch_2). The first or N-terminal ACT domain of these proteins cluster with the ThrA-like ACT 1 domains (ACT_AKi-HSDH-ThrA-like_1) which includes the threonine-sensitive archaeal Methanococcus jannaschii aspartokinase ACT 1 domain. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=27.37 E-value=1.2e+02 Score=19.33 Aligned_cols=49 Identities=12% Similarity=0.016 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++.+.+.+.|+-+..........++ ++.+.+++.++++++|.+.+
T Consensus 16 ~~~~~i~~~L~~~~I~v~~i~q~~s~~~i--sf~i~~~~~~~~~~~Lh~~~ 64 (66)
T cd04924 16 GVAGRVFGALGKAGINVIMISQGSSEYNI--SFVVAEDDGWAAVKAVHDEF 64 (66)
T ss_pred cHHHHHHHHHHHCCCCEEEEEecCccceE--EEEEeHHHHHHHHHHHHHHh
Confidence 34567888888988766322111111333 46778899999998887765
No 480
>PRK11920 rirA iron-responsive transcriptional regulator; Reviewed
Probab=26.98 E-value=1.2e+02 Score=24.02 Aligned_cols=20 Identities=5% Similarity=0.169 Sum_probs=10.6
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q psy11784 248 CLTTENVLFIVSTLNRIFTS 267 (284)
Q Consensus 248 ~~t~~~id~~~~~l~~~l~~ 267 (284)
+...+-++++.+.+.+.++.
T Consensus 105 C~~~~~~~~~~~~~~~~L~~ 124 (153)
T PRK11920 105 CGLNSALRKALNAFFAVLSK 124 (153)
T ss_pred CccHHHHHHHHHHHHHHHhC
Confidence 33445566666666555543
No 481
>cd04937 ACT_AKi-DapG-BS_2 ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI. This CD includes the C-terminal of the two ACT domains of the diaminopimelate-sensitive aspartokinase (AK) isoenzyme AKI, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) strain 168), Clostridia, and Actinobacteria bacterial species. In B. subtilis, the regulation of the diaminopimelate-lysine biosynthetic pathway involves dual control by diaminopimelate and lysine, effected through separate diaminopimelate- and lysine-sensitive AK isoenzymes. AKI activity is invariant during the exponential and stationary phases of growth and is not altered by addition of amino acids to the growth medium. The role of this isoenzyme is most likely to provide a constant level of aspartyl-beta-phosphate for the biosynthesis of diaminopimelate for peptidoglycan synthesis and dipicolinate during sporulation. The BS AKI is tetrameric consisting of two alpha and two beta subunits; th
Probab=26.57 E-value=1.9e+02 Score=18.80 Aligned_cols=48 Identities=10% Similarity=0.183 Sum_probs=34.4
Q ss_pred cHHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 214 TYYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 214 ~~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
.....++.+.|.+.|+-+.........+ ++.+.+++.++++++|.+.+
T Consensus 15 ~gi~~~if~aL~~~~I~v~~~~~Se~~i----s~~v~~~~~~~av~~Lh~~f 62 (64)
T cd04937 15 PGVMAKIVGALSKEGIEILQTADSHTTI----SCLVSEDDVKEAVNALHEAF 62 (64)
T ss_pred cCHHHHHHHHHHHCCCCEEEEEcCccEE----EEEEcHHHHHHHHHHHHHHh
Confidence 3456788889999998876443222333 45788999999999988765
No 482
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=26.54 E-value=1.5e+02 Score=26.95 Aligned_cols=56 Identities=11% Similarity=0.122 Sum_probs=34.5
Q ss_pred HHHHHHHHHhcCCCeeEEEEcceecCC---------Cccc--CC----hhHHHHHHHHHHHhCCEEEEe-cccc
Q psy11784 77 AQAARNIMEAHRDNIATLICEPVFVVH---------GAVV--PP----PGWLSLMYDYIHEIGGVVIAD-EIQC 134 (284)
Q Consensus 77 ~~~l~~~i~~~~~~vaavi~Epv~~~~---------G~~~--~~----~~~l~~l~~l~~~~g~llI~D-Ev~t 134 (284)
++.++.+++ ...+..||+|++.+.- |... .. ..+|+.|..+++++|+.+|+= ++++
T Consensus 122 l~~~~~li~--~~~~~lIVIDSv~al~~~~E~e~~~g~~~~~~~aR~m~~~lr~L~~~l~~~~~tvi~tNQvr~ 193 (321)
T TIGR02012 122 LEIAETLVR--SGAVDIIVVDSVAALVPKAEIEGEMGDSHVGLQARLMSQALRKLTGALSKSNTTAIFINQIRE 193 (321)
T ss_pred HHHHHHHhh--ccCCcEEEEcchhhhccchhhcccccccchhHHHHHHHHHHHHHHHHHHhCCCEEEEEeccee
Confidence 444444444 3347889999986531 1110 01 147888999999999887763 4554
No 483
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=26.43 E-value=2.2e+02 Score=23.82 Aligned_cols=37 Identities=14% Similarity=0.219 Sum_probs=27.2
Q ss_pred CCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 88 RDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 88 ~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
+-..++||+|-+-- .|.... .+++.+++++||+.+|.
T Consensus 150 Gl~p~avi~eil~~-dG~~~~----~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 150 GLSPVAVICEILDD-DGDMAR----RDELEEFAKKHGLPIVS 186 (194)
T ss_dssp TS-SBEEEEEBBET-TSSBHC----HHHHHHHHHHTT-EEEE
T ss_pred CCCCcEEEEEEeCC-CCCcCC----HHHHHHHHHHcCCcEEE
Confidence 33468899987744 566565 88999999999999884
No 484
>PLN03186 DNA repair protein RAD51 homolog; Provisional
Probab=26.30 E-value=1.6e+02 Score=26.89 Aligned_cols=46 Identities=15% Similarity=0.291 Sum_probs=30.2
Q ss_pred CCeeEEEEcceecC-----CC--cccC----ChhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 89 DNIATLICEPVFVV-----HG--AVVP----PPGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 89 ~~vaavi~Epv~~~-----~G--~~~~----~~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
.++..||+|++... .| .... =..++..|..+|++||+.+++ -.|++
T Consensus 217 ~~~~LIVIDSI~alfr~~~~~~g~l~~r~~~L~~~l~~L~~lA~~~~vaVviTNqv~~ 274 (342)
T PLN03186 217 TRFALMIVDSATALYRTEFSGRGELSARQMHLGKFLRSLQRLADEFGVAVVITNQVVA 274 (342)
T ss_pred cCCCEEEEeCcHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCEEE
Confidence 45899999998652 11 1110 126778899999999977765 44544
No 485
>KOG2040|consensus
Probab=26.16 E-value=7.1e+02 Score=25.32 Aligned_cols=45 Identities=11% Similarity=-0.043 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHH
Q psy11784 216 YLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLN 262 (284)
Q Consensus 216 ~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~ 262 (284)
.+.++..++.++++-++. ...+.|-++.-=+.+++|+|.++..|.
T Consensus 434 s~~~~l~rA~~~~iNlr~--~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 434 SAEEVLDRAAKRQINLRL--VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred cHHHHHHHHHhhcCceEE--eecCceEEeecccccHHHHHHHHHHHc
Confidence 466777778888887774 235677777777889999999999985
No 486
>TIGR02239 recomb_RAD51 DNA repair protein RAD51. This eukaryotic sequence family consists of RAD51, a protein involved in DNA homologous recombination and repair. It is similar in sequence the exclusively meiotic recombinase DMC1 (TIGR02238), to archaeal families RadA (TIGR02236) and RadB (TIGR02237), and to bacterial RecA (TIGR02012).
Probab=26.13 E-value=1.8e+02 Score=26.17 Aligned_cols=46 Identities=17% Similarity=0.252 Sum_probs=29.9
Q ss_pred CCeeEEEEcceecC-----CCcccC------ChhHHHHHHHHHHHhCCEEEE-ecccc
Q psy11784 89 DNIATLICEPVFVV-----HGAVVP------PPGWLSLMYDYIHEIGGVVIA-DEIQC 134 (284)
Q Consensus 89 ~~vaavi~Epv~~~-----~G~~~~------~~~~l~~l~~l~~~~g~llI~-DEv~t 134 (284)
.++..||+|++... .|.-.. =..++..|..++++|++.+++ -+|.+
T Consensus 190 ~~~~LvVIDSI~al~r~~~~~~~~~~~rq~~l~~~~~~L~~la~~~~vavv~tNqv~~ 247 (316)
T TIGR02239 190 SRFALLIVDSATALYRTDFSGRGELSARQMHLARFLRSLQRLADEFGVAVVITNQVVA 247 (316)
T ss_pred CCccEEEEECcHHHhhhhcCCcchHHHHHHHHHHHHHHHHHHHHHhCCEEEEECceEE
Confidence 45889999998653 111000 025667899999999987765 44443
No 487
>cd07578 nitrilase_1_R1 First nitrilase domain of an uncharacterized subgroup of the nitrilase superfamily (putative class 13 nitrilases). Members of this subgroup have two nitrilase domains. This is the first of those two domains. The nitrilase superfamily is comprised of nitrile- or amide-hydrolyzing enzymes and amide-condensing enzymes, which depend on a Glu-Lys-Cys catalytic triad. This superfamily has been classified in the literature based on global and structure based sequence analysis into thirteen different enzyme classes (referred to as 1-13). Class 13 represents proteins that at the time were difficult to place in a distinct similarity group; this subgroup represents either a new class or one that was included previously in class 13. Members of this superfamily generally form homomeric complexes, the basic building block of which is a homodimer.
Probab=26.13 E-value=1.8e+02 Score=24.90 Aligned_cols=19 Identities=5% Similarity=-0.013 Sum_probs=16.4
Q ss_pred hHHHHHHHHHHHhCCEEEE
Q psy11784 111 GWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~ 129 (284)
.+++.+.++++++++.+++
T Consensus 65 ~~~~~l~~~a~~~~i~ii~ 83 (258)
T cd07578 65 PTTARFAELAREHDCYIVV 83 (258)
T ss_pred HHHHHHHHHHHHcCcEEEE
Confidence 4688999999999998775
No 488
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=26.09 E-value=1e+02 Score=28.95 Aligned_cols=34 Identities=21% Similarity=0.324 Sum_probs=26.6
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~ 129 (284)
.++||+| +....|.... .+.+.++|++||+.++.
T Consensus 159 Paavi~e-i~~~~G~~~~----~~~~~~fA~~~~l~~v~ 192 (402)
T PRK09311 159 PAGVICE-IVNEDGTMAR----VPELRVFADEHDLALIT 192 (402)
T ss_pred ceEEEEE-EecCCCcccc----hHHHHHHHHHcCCeEEE
Confidence 5889998 5555566565 78889999999998863
No 489
>cd04440 DEP_2_P-Rex DEP (Dishevelled, Egl-10, and Pleckstrin) domain 2 found in P-Rex-like proteins. The P-Rex family is the guanine-nucleotide exchange factor (GEF) for the small GTPase Rac that contains an N-terminal RhoGEF domain, two DEP and PDZ domains. Rac-GEF activity is stimulated by phosphatidylinositol (3,4,5)-trisphosphate (PtdIns(3,4,5)P3), a lipid second messenger, and the G beta-gamma subunits of heterotrimeric G proteins. The DEP domains are not involved in mediating these stimuli, but may be of importance for basal and stimulated levels Rac-GEF activity.
Probab=25.96 E-value=1.1e+02 Score=22.43 Aligned_cols=50 Identities=10% Similarity=-0.116 Sum_probs=31.7
Q ss_pred hhHHHHHHHHHHHHHhc---------------cCceeEEEEe---------cccHHHHHHHHHHHHCCcEEeec
Q psy11784 185 DDNRPSGKYLVRPLGIN---------------LHIFWCLILL---------SITYYLYRYTRRMKEAKIIVANE 234 (284)
Q Consensus 185 ~~~~~~~~~l~~~L~~~---------------~G~~~~i~~~---------~~~~~~~~~~~~l~~~Gv~~~~~ 234 (284)
+.+-.+|+.|...|... ...++|-+++ .+.+.+-.+.+.|+++|++-...
T Consensus 3 ~~i~~~G~~L~~~l~~~~~~likdR~~~l~~y~~cFvGsElVdWLi~~g~~~tR~eAv~~gq~Ll~~gii~HV~ 76 (93)
T cd04440 3 EDIMSKGVRLYCRLHSLFTPVVKDRDYHLKTYKSVVPASKLVDWLLAQGDCRTREEAVILGVGLCNNGFMHHVL 76 (93)
T ss_pred HHHHHHHHHHHHHHHccCccceeeceeccEEcccccchhHHHHHHHHcCCCCCHHHHHHHHHHHHhCCCEEecC
Confidence 34456677777777543 2234444443 23456778899999999998643
No 490
>PRK05380 pyrG CTP synthetase; Validated
Probab=25.89 E-value=1.5e+02 Score=28.83 Aligned_cols=45 Identities=16% Similarity=0.149 Sum_probs=29.5
Q ss_pred HHHHHHHHhcCCCeeEEEEcceecCCCcccCChhHHHHHHHHHHHhC
Q psy11784 78 QAARNIMEAHRDNIATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIG 124 (284)
Q Consensus 78 ~~l~~~i~~~~~~vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g 124 (284)
+++.+.|.+...+.-.+|+|- -|.-|++- +.-|++++|++..+.|
T Consensus 120 ~eI~~~i~~~~~~~dv~i~Ei-GGTvGDiE-s~pf~ea~rq~~~~~g 164 (533)
T PRK05380 120 DEIKERILAAGTDADVVIVEI-GGTVGDIE-SLPFLEAIRQLRLELG 164 (533)
T ss_pred HHHHHHHHhcCCCCCEEEEEe-CCcccccc-ccHHHHHHHHHHHhhC
Confidence 555665654333344577774 44445544 6789999999999975
No 491
>TIGR00197 yjeF_nterm yjeF N-terminal region. This model is built on yeast protein YNL200C and the N-terminal regions of E. coli yjeF and its orthologs in various species. The C-terminal region of yjeF and its orthologs shows similarity to hydroxyethylthiazole kinase (thiM) and other enzymes involved in thiamine biosynthesis. Yeast YKL151C and B. subtilis yxkO match the yjeF C-terminal domain but lack this region.
Probab=25.62 E-value=1.2e+02 Score=25.39 Aligned_cols=63 Identities=14% Similarity=0.225 Sum_probs=45.2
Q ss_pred eEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEEecccccC-ccccCccccccccCCCCcE-EEec
Q psy11784 92 ATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQCGM-GRSGSHFWAFQTQGAVPDI-ITVG 159 (284)
Q Consensus 92 aavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~-gr~G~~~~a~~~~g~~pDi-v~~s 159 (284)
+-+|||.++|.| ..-+.++.++++.+...+.+..+|.=++-||+ .-+|. . ...-+.+|. +||+
T Consensus 115 ~dliIDalfGtG-l~~~l~~~~~~~i~~iN~~~~~vlAiDiPSGl~~dtG~-~---~~~av~Ad~Tvtf~ 179 (205)
T TIGR00197 115 CDVIIDAILGTG-FKGKLREPFKTIVESINELPAPIVSVDIPSGLDVDTGA-I---EGPAVNADLTITFH 179 (205)
T ss_pred CCEEEEeeecCC-CCCccchHHHHHHHHHHhCCCCeEEEecCCcccCCCCC-C---CCcceeCCEEEEec
Confidence 468999999985 34455677888888899999999999999998 33453 1 112366775 4664
No 492
>PRK09165 replicative DNA helicase; Provisional
Probab=25.30 E-value=1.7e+02 Score=28.20 Aligned_cols=42 Identities=14% Similarity=0.131 Sum_probs=28.9
Q ss_pred CCeeEEEEcceecCCCcc---cCC-----hhHHHHHHHHHHHhCCEEEEe
Q psy11784 89 DNIATLICEPVFVVHGAV---VPP-----PGWLSLMYDYIHEIGGVVIAD 130 (284)
Q Consensus 89 ~~vaavi~Epv~~~~G~~---~~~-----~~~l~~l~~l~~~~g~llI~D 130 (284)
.++..||||.+|-..... ... ....+.|..+|+++++++|+=
T Consensus 340 ~~~~lvvIDyLqli~~~~~~~~~~r~~ev~~is~~LK~lAkel~ipVi~l 389 (497)
T PRK09165 340 HGLDLLVVDYLQLIRGSSKRSSDNRVQEISEITQGLKALAKELNIPVIAL 389 (497)
T ss_pred cCCCEEEEcchHhccCCCCCCCCchHHHHHHHHHHHHHHHHHhCCeEEEe
Confidence 347889999987543211 111 246788999999999988863
No 493
>PRK10785 maltodextrin glucosidase; Provisional
Probab=25.21 E-value=2.3e+02 Score=28.10 Aligned_cols=61 Identities=11% Similarity=0.112 Sum_probs=40.4
Q ss_pred HHHHHHHHH-hcCCCeeEEEEcceecCC---Cccc----------CChhHHHHHHHHHHHhCCEEEEecccccCc
Q psy11784 77 AQAARNIME-AHRDNIATLICEPVFVVH---GAVV----------PPPGWLSLMYDYIHEIGGVVIADEIQCGMG 137 (284)
Q Consensus 77 ~~~l~~~i~-~~~~~vaavi~Epv~~~~---G~~~----------~~~~~l~~l~~l~~~~g~llI~DEv~tG~g 137 (284)
++.+.+.|+ ...=+|-+|.+-||+-+. |.-+ -+.+-|++|.+.|+++|+-+|+|=|....|
T Consensus 178 l~GI~~kLdYL~~LGv~~I~L~Pif~s~s~hgYd~~Dy~~iDp~~Gt~~df~~Lv~~aH~rGikVilD~V~NH~~ 252 (598)
T PRK10785 178 LDGISEKLPYLKKLGVTALYLNPIFTAPSVHKYDTEDYRHVDPQLGGDAALLRLRHATQQRGMRLVLDGVFNHTG 252 (598)
T ss_pred HHHHHHHHHHHHHcCCCEEEeCCcccCCCCCCcCcccccccCcccCCHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 344444443 123468999999986442 2111 123569999999999999999999965443
No 494
>TIGR03381 agmatine_aguB N-carbamoylputrescine amidase. Members of this family are N-carbamoylputrescine amidase (3.5.1.53). Bacterial genes are designated AguB. The AguAB pathway replaces SpeB for conversion of agmatine to putrescine in two steps rather than one.
Probab=25.18 E-value=1.7e+02 Score=25.28 Aligned_cols=19 Identities=16% Similarity=0.153 Sum_probs=16.9
Q ss_pred hHHHHHHHHHHHhCCEEEE
Q psy11784 111 GWLSLMYDYIHEIGGVVIA 129 (284)
Q Consensus 111 ~~l~~l~~l~~~~g~llI~ 129 (284)
.+++.+.++|+++++.+++
T Consensus 66 ~~~~~l~~~a~~~~i~i~~ 84 (279)
T TIGR03381 66 PAIKRFQALAKELGVVIPV 84 (279)
T ss_pred hHHHHHHHHHHHcCcEEEE
Confidence 5789999999999998875
No 495
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=25.12 E-value=2.8e+02 Score=20.31 Aligned_cols=51 Identities=14% Similarity=0.222 Sum_probs=30.0
Q ss_pred HHHHHHHHCCcEEeecCC--CCCEEEE----EcCCCCCHHHHH-HHHHHHHHHHHHHh
Q psy11784 219 RYTRRMKEAKIIVANEGE--YGNVLLF----LPAMCLTTENVL-FIVSTLNRIFTSLQ 269 (284)
Q Consensus 219 ~~~~~l~~~Gv~~~~~~~--~~~~lr~----~p~l~~t~~~id-~~~~~l~~~l~~~~ 269 (284)
.-.+.|.++||++.|.-. .++.+.. .-.+..+++++. +..+++.+.+.++.
T Consensus 39 ~a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~ 96 (102)
T smart00839 39 EADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIF 96 (102)
T ss_pred HHHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 355677899999987522 2233322 112222666665 77777777777654
No 496
>cd04916 ACT_AKiii-YclM-BS_2 ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII. This CD includes the second of two ACT domains located C-terminal to the catalytic domain of the lysine plus threonine-sensitive aspartokinase isoenzyme AKIII, a monofunctional class enzyme found in Bacilli (Bacillus subtilis (BS) YclM) and Clostridia species. Aspartokinase is the first enzyme in the aspartate metabolic pathway and catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP. B. subtilis YclM is reported to be a single polypeptide of 50 kD. AKIII from B. subtilis strain 168 is induced by lysine and repressed by threonine and it is synergistically inhibited by lysine and threonine. Members of this CD belong to the superfamily of ACT regulatory domains.
Probab=25.12 E-value=1.5e+02 Score=18.87 Aligned_cols=49 Identities=14% Similarity=0.051 Sum_probs=31.2
Q ss_pred HHHHHHHHHHHHCCcEEeecCCCCCEEEEEcCCCCCHHHHHHHHHHHHHHH
Q psy11784 215 YYLYRYTRRMKEAKIIVANEGEYGNVLLFLPAMCLTTENVLFIVSTLNRIF 265 (284)
Q Consensus 215 ~~~~~~~~~l~~~Gv~~~~~~~~~~~lr~~p~l~~t~~~id~~~~~l~~~l 265 (284)
....++...|.+.|+-+...........+ ++.+.+++.+.+++++.+.+
T Consensus 16 ~~~~~i~~~L~~~~i~v~~i~~~~s~~~i--sf~v~~~d~~~~~~~lh~~~ 64 (66)
T cd04916 16 GVSARATAALAKAGINIRMINQGSSEISI--MIGVHNEDADKAVKAIYEEF 64 (66)
T ss_pred cHHHHHHHHHHHCCCCEEEEEecCcccEE--EEEEeHHHHHHHHHHHHHHH
Confidence 44567888888888866432111111233 35778888998888887654
No 497
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=25.08 E-value=1.1e+02 Score=26.31 Aligned_cols=38 Identities=26% Similarity=0.400 Sum_probs=27.8
Q ss_pred eeEEEEcceecCCCcccCChhHHHHHHHHHHHhCCEEEE-eccc
Q psy11784 91 IATLICEPVFVVHGAVVPPPGWLSLMYDYIHEIGGVVIA-DEIQ 133 (284)
Q Consensus 91 vaavi~Epv~~~~G~~~~~~~~l~~l~~l~~~~g~llI~-DEv~ 133 (284)
.++||+|-+- ..|.... ++++.+++++||+.+|- +|++
T Consensus 173 P~~vicEil~-~dG~ma~----~~~l~~fA~~~~l~iisi~dli 211 (230)
T PRK00014 173 PAGVLCELMN-ADGTMMR----GASLERYAAKEGLVALAIDELA 211 (230)
T ss_pred ceEEEEEEeC-CCCCccC----HHHHHHHHHHcCCcEEEHHHHH
Confidence 5788888643 3465555 88999999999998873 4444
No 498
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=25.07 E-value=2.7e+02 Score=21.78 Aligned_cols=20 Identities=15% Similarity=0.116 Sum_probs=16.3
Q ss_pred ChhHHHHHHHHHHHhCCEEE
Q psy11784 109 PPGWLSLMYDYIHEIGGVVI 128 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI 128 (284)
-..|-+.++++|+++++.+|
T Consensus 115 ~~~~n~~l~~~a~~~~~~~i 134 (174)
T cd01841 115 IQRLNDAIKELAPELGVTFI 134 (174)
T ss_pred HHHHHHHHHHHHHHCCCEEE
Confidence 35788899999999996655
No 499
>PRK13602 putative ribosomal protein L7Ae-like; Provisional
Probab=25.03 E-value=84 Score=22.15 Aligned_cols=24 Identities=17% Similarity=0.047 Sum_probs=20.0
Q ss_pred ChhHHHHHHHHHHHhCCEEEEecc
Q psy11784 109 PPGWLSLMYDYIHEIGGVVIADEI 132 (284)
Q Consensus 109 ~~~~l~~l~~l~~~~g~llI~DEv 132 (284)
++...+.+..+|++++++++.-+-
T Consensus 38 ~~~~~~~i~~~c~~~~Vp~~~~~s 61 (82)
T PRK13602 38 DPRLTEKVEALANEKGVPVSKVDS 61 (82)
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC
Confidence 446899999999999999976653
No 500
>TIGR02810 agaZ_gatZ D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit. Aldolases specific for D-tagatose-bisphosphate occur in distinct pathways in Escherichia coli and other bacteria, one for the degradation of galactitol (formerly dulcitol) and one for degradation of N-acetyl-galactosamine and D-galactosamine. This family represents a protein of both systems that behaves as a non-catalytic subunit of D-tagatose-bisphosphate aldolase, required both for full activity and for good stability of the aldolase. Note that members of this protein family appear in public databases annotated as putative tagatose 6-phosphate kinases, possibly in error.
Probab=24.88 E-value=3.5e+02 Score=25.51 Aligned_cols=63 Identities=24% Similarity=0.367 Sum_probs=48.0
Q ss_pred hHHHHHHHHHHHHHHHhcC-----CCeeEEEEcce--ecCCCcccCChhHHHHHHHHHHHhCCEEEEecccc
Q psy11784 70 PQAAQKYAQAARNIMEAHR-----DNIATLICEPV--FVVHGAVVPPPGWLSLMYDYIHEIGGVVIADEIQC 134 (284)
Q Consensus 70 ~~~~~~~~~~l~~~i~~~~-----~~vaavi~Epv--~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~t 134 (284)
++....+++.+++.+++.+ +.+.++++-|- ++..++..+.++-.++|.+++++|+.++. |+|+
T Consensus 190 ~e~~~~ti~~h~~af~~~GL~~aw~rvi~~VVQpGvef~~~~V~~y~~~~A~~Ls~~~~~~~~lvf--EaHS 259 (420)
T TIGR02810 190 PEAARATLRAHRKAFAARGLEDAWPRVIALVVQPGVEFDHHNVIHYQPERAQALSQVIDNTPGLVF--EAHS 259 (420)
T ss_pred HHHHHHHHHHHHHHHHHcCchhhhccceEEEecCCeeECCCceeecCHHHHHHHHHHHHhCCCcee--ecCC
Confidence 3455566777777777443 23889999994 67778899999999999999999987654 6665
Done!